BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 008266
         (572 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  689 bits (1777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/581 (59%), Positives = 430/581 (74%), Gaps = 23/581 (3%)

Query: 1   MALFIACGESSSPVHIQILRFLYQTFDSIKLNVARIFSN-----------SRTCSDDDNL 49
           MAL I   ES    H+   R      +SIK +VA+IF+N           +R     + L
Sbjct: 1   MALSIVFQES----HV-FFRLFNACIESIKHDVAQIFANVFSFKPYSPANNRPSGHGNLL 55

Query: 50  PCTLNDIMSYVGDQCRSKTRHWFS-NKDSDNEGNPQAVFNALDLILKENLDRLKTMRDT- 107
           P  L D++  VG+Q +  T+ WFS NK  D E +P+ VFN LD ILK++L+RLK MR++ 
Sbjct: 56  PFALEDLIISVGNQYQVTTQDWFSQNKGHDEERDPRVVFNVLDAILKDSLERLKMMRESV 115

Query: 108 -----GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNE 162
                G   CTLE DY   VA+IR+LCL GK+  ALWLR KMIQKG +PDVLTHNYLVN 
Sbjct: 116 SLTKIGLNGCTLEMDYTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNG 175

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           LCK GDLEKAD+++REM E+ PSPNCAT+N FI GYC  N +DKAL+LFSTMAN+GI PN
Sbjct: 176 LCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPN 235

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
           +VT+NIL+HALCKKGLL DA K L ++L DD GK TSD+ITSTI MD   K GD  QAL 
Sbjct: 236 KVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALV 295

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
            W++M Q+  Q D+VAYNVLI+GFCL  D++SA+ YFC+M KRG LPD+ TYNTL++  C
Sbjct: 296 HWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFC 355

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K G LDEA + +GV+SK G APD ISYK IIQGLCIHGD+++A +FL+ MLE  +VPEP 
Sbjct: 356 KIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPL 415

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
           IWNV+IDG+GR GDLSNA SIRD M+SFG+  NVFT+NALI A+ +GG+I DA S+KKEM
Sbjct: 416 IWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEM 475

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           LL+GI+PDV TYNLLIGA+CN G IH AL+LYDEMLRRG  PDIITYTELI+G C RG++
Sbjct: 476 LLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHV 535

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            EAEE+ AK+Q  GL+IDH PF+IL ++Y R +   +A D+
Sbjct: 536 MEAEELLAKLQRSGLSIDHAPFQILIQKYCRTRVPGRAYDL 576



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 179/365 (49%), Gaps = 9/365 (2%)

Query: 67  KTRHWFSNKDSDNEGNPQAVFNAL-DLILKENL--DRLKTMRDTGPVRCTLETDYRRHVA 123
           K  + FS   +   G  +  +N L   + K+ L  D  K +       C  ET       
Sbjct: 219 KALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDIITST 278

Query: 124 VIRDLCLG-GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +  D CL  G +  AL    +M+Q+GT  DV+ +N L++  C I D+  A     EM + 
Sbjct: 279 IFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKR 338

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  I+G+C++  LD+A ++   M+  G  P+ +++ +++  LC  G +  A
Sbjct: 339 GLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRA 398

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +FL  +L   +     + +   +++D + ++GD   AL++ + M    I  ++  YN L
Sbjct: 399 NQFLVCML---ENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNAL 455

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+     G+I  A +   +ML  G  PDV+TYN L+   C  G++  A   Y  + + G 
Sbjct: 456 IHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGY 515

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI-WNVIIDGYGRCGDLSNAF 421
            PD I+Y  +I+G CI G +++A E LL+ L++S +   H  + ++I  Y R      A+
Sbjct: 516 EPDIITYTELIRGFCIRGHVMEAEE-LLAKLQRSGLSIDHAPFQILIQKYCRTRVPGRAY 574

Query: 422 SIRDL 426
            +  L
Sbjct: 575 DLTKL 579



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 106/227 (46%), Gaps = 3/227 (1%)

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           LC +GKL  A      + + GV PD +++  ++ GLC  GD+ KA   +  MLE    P 
Sbjct: 141 LCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPN 200

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +N  I GY    ++  A  +   M + G+  N  T+N LI A  + G + DA  L +
Sbjct: 201 CATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLE 260

Query: 461 EMLLDGI---FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           ++L D       D+ T  + +      G +  AL  +DEML+RG   D++ Y  LI G C
Sbjct: 261 KILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFC 320

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
              +M  A   F ++   GL  D   +  L   + ++   D+A  IH
Sbjct: 321 LIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIH 367


>gi|255574125|ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532604|gb|EEF34390.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 621

 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/558 (57%), Positives = 415/558 (74%), Gaps = 15/558 (2%)

Query: 2   ALFIACGESSSPVHIQILRFLYQTFDSIKLNVARIFSN--SRTCSDDDNLPCTLNDIMSY 59
           AL I+CGESS+  HI +LR L +  D+IK + A+IF+N   R    D N     +D++  
Sbjct: 3   ALLISCGESSASSHIFLLRLLDRAMDTIKHHTAQIFANIFCRESIIDPNASYFFDDMVKT 62

Query: 60  VGDQCRSKTRHWFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDT--------GPVR 111
           + ++CR +      NK+ ++E +PQ VFN LD +LK +L+RLK+MR++        G   
Sbjct: 63  LSNRCRLRR----DNKNLNDEDDPQVVFNVLDAMLKGSLERLKSMRESIGISSVKVGLAG 118

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
            +++  Y  H +++RDLCL GK+G ALWLRRK++ KG VPD+LTHN+LVN LC  GDL+K
Sbjct: 119 RSVDVSYAGHASLVRDLCLAGKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQK 178

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           AD +I+EM E+ PSPNCAT+N FI GYC +N +DKAL+LFS+M+++G++PNRVT NILVH
Sbjct: 179 ADCLIKEMLEIGPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILVH 238

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
           ALCK+GLL DA K LGE+L DD+ KA  ++ITSTILMD   KNGD  QAL +W  M Q N
Sbjct: 239 ALCKRGLLEDAKKLLGELL-DDNEKARVNLITSTILMDGCIKNGDMVQALGIWYAMSQNN 297

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
              D VAYNVLI+GFCL  ++  A++Y C MLKRG LPD+ TYNTL++ LCK GKL EA 
Sbjct: 298 TLMDSVAYNVLIHGFCLTRNMKLAYSYSCDMLKRGLLPDIFTYNTLISGLCKAGKLYEAC 357

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
           + + V+ + GVAPDQISYK +IQGLC  GD++KA E L  MLEKS+VPE H+WN+IIDG+
Sbjct: 358 YIHDVMLRMGVAPDQISYKIVIQGLCTRGDVLKANEHLHCMLEKSMVPEAHVWNLIIDGF 417

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            RCGD +NAFSIRD MLSFGV  NVFT+NALI A+ + G+I DA+SLKK ML  G+FPDV
Sbjct: 418 ARCGDSANAFSIRDQMLSFGVVPNVFTYNALIHAQVKTGNIVDAYSLKKMMLCHGLFPDV 477

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TYNLLIG +CN G I +A+QLY EMLR G  PDIITYTELI+G C RGNMKEA+E+FAK
Sbjct: 478 ITYNLLIGTACNAGRISIAVQLYYEMLRSGHEPDIITYTELIRGLCMRGNMKEAKELFAK 537

Query: 532 IQTLGLAIDHIPFRILKK 549
           +Q  GL +DH+PF++L K
Sbjct: 538 LQNTGLTVDHVPFQLLIK 555


>gi|449442212|ref|XP_004138876.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Cucumis sativus]
 gi|449499387|ref|XP_004160802.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Cucumis sativus]
          Length = 633

 Score =  613 bits (1581), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 313/581 (53%), Positives = 407/581 (70%), Gaps = 19/581 (3%)

Query: 6   ACGESSSPVHIQILRFLYQTFDSIKLNVARIFS----------NSRTCSDDDNLPCTLND 55
           A    S+P  I +L FL+   +S+K +++R+F+           +R+  D+D+L   L  
Sbjct: 4   ALAIESAPSQILVLGFLHGALNSLKRDISRMFAVFYGRPDIDEAARSNEDEDSLHPALKS 63

Query: 56  IMSYVGDQCRSKTRHWFSNKDSDN-EGNPQAVFNALDLILKENLDRLKTMRDT------G 108
           +M+ VGD C  ++   FS K + N EG+P AVFN LD +LK +LDRLKTMR++      G
Sbjct: 64  LMTTVGDHCDLRSSDCFSEKRNFNGEGDPGAVFNVLDALLKGSLDRLKTMRESICLAKSG 123

Query: 109 PVRCTLE-TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
             +C LE T    +  ++RDLCL GK G AL LRRK+I++G   D++THNYL+N LC   
Sbjct: 124 LQKCVLEATQQPDYTVMVRDLCLKGKFGAALLLRRKLIKEGFAVDLVTHNYLLNGLCINC 183

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           D+E AD + REM EM PSPNCATYN  I G+C    +DKAL LF TM N+GIRP+R+T+N
Sbjct: 184 DMEMADSLFREMLEMGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYN 243

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           IL+HALCK+G+L DA K L EV+  DD K T D ITSTILMDS FK+GD  QA+ALW+ M
Sbjct: 244 ILLHALCKRGILVDARKLL-EVILGDDIKTTDDAITSTILMDSCFKSGDTIQAVALWDKM 302

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            +K  + D+VAYNVLI+G CLN D   A  Y   MLKRGFLPD+ TYNTL++  CK+G+ 
Sbjct: 303 VEKKTEIDVVAYNVLIHGLCLNQDKKIALGYVADMLKRGFLPDIFTYNTLISAFCKEGQF 362

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            +A + + V+S+ GV+PDQI YK IIQ LC++GD +KA EFL SMLEKS+VPEPHIWN+I
Sbjct: 363 GDAYYIHDVMSRMGVSPDQILYKMIIQALCMNGDAIKADEFLHSMLEKSMVPEPHIWNLI 422

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           ID YGR G LSNA S RD ML  GV  NVFT+NALI A+ RGG+IF A+SLKKEMLL G+
Sbjct: 423 IDCYGRYGYLSNAISKRDQMLVAGVQPNVFTYNALIHAQVRGGNIFSAYSLKKEMLLLGL 482

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           FPDV TYNLLI  +C  G +  ALQLYDEMLR+G   D ITYTELI GHC  G MKEAE+
Sbjct: 483 FPDVVTYNLLINGACKHGQLRFALQLYDEMLRKGYEADKITYTELINGHCMCGEMKEAED 542

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +F ++   GL +D +PF+++ ++Y+++ E D A   +++ L
Sbjct: 543 LFFELHRSGLPMDIVPFKVIFEKYQKIGEPDMALKFYRRRL 583



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 62/129 (48%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I     GG I +A  L+++M+  G  PDV+T+N L+N  CK G L  A  +  EM   
Sbjct: 456 ALIHAQVRGGNIFSAYSLKKEMLLLGLFPDVVTYNLLINGACKHGQLRFALQLYDEMLRK 515

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +  TY   I G+C   E+ +A  LF  +  +G+  + V   ++     K G    A
Sbjct: 516 GYEADKITYTELINGHCMCGEMKEAEDLFFELHRSGLPMDIVPFKVIFEKYQKIGEPDMA 575

Query: 243 VKFLGEVLA 251
           +KF    LA
Sbjct: 576 LKFYRRRLA 584


>gi|297808491|ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317966|gb|EFH48388.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 292/573 (50%), Positives = 396/573 (69%), Gaps = 6/573 (1%)

Query: 1   MALFIACGESSSPVHIQILRFLYQTFDSIKLNVARIFSNSRTCSDDDNLPCTLNDIMSYV 60
           MALFI+CGE SS     +LR L Q+ D +  NV+RI +   T   D  +  +  +  S +
Sbjct: 1   MALFISCGEVSSS-QFTLLRLLNQSLDFVSDNVSRILAPIVTNLRDFEMRLSCIERPSSI 59

Query: 61  -GDQCRSKTRHWFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETD-- 117
            G      T  WFS++  D + +P+A+FN LD ILK +LDRL ++R++       E D  
Sbjct: 60  SGKHSHLCTEKWFSDQ-KDQKRDPEAIFNVLDYILKSSLDRLASLRESVCQTKNFEYDDS 118

Query: 118 YRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR 177
              H +++RDLCL GK+  ALWLR KM++ G +P ++ HN+L+N LCK+G +EKAD ++R
Sbjct: 119 LSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLVR 178

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           EM EM PSPNC +YN  I G C VN +DKAL+LFST+   GI+PNRVT NI+VHALC+KG
Sbjct: 179 EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQKG 238

Query: 238 LLGDA-VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           ++G+   K L E+L      A  D++T TILMDS FKNG+  QAL +W +M QKN+ TD 
Sbjct: 239 VIGNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTDS 298

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YNV+I G C +G++ +A+ + C M+KRG  PDV TYNTL++ LCK GK D A   +G 
Sbjct: 299 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGT 358

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   GVAPDQISYK IIQGLCI GD+ +A EFL SML++S++PE  +WNV+IDGYGR GD
Sbjct: 359 MQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGD 418

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
            S A S+ +LMLS+GV  NV+T NALI    +GG + DA+ +K EM    I PD  TYNL
Sbjct: 419 TSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNL 478

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L+GA+C LGH+ LA QLYDEML+RG  PDIITYTEL++G C +G +KEAE + +++Q  G
Sbjct: 479 LVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLLSRMQVSG 538

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
           + +DH+PF IL K+Y R++  D+A  +++KWL+
Sbjct: 539 ITMDHVPFLILVKKYTRLQRPDEAYLVYKKWLV 571



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 150/289 (51%), Gaps = 8/289 (2%)

Query: 290 KNIQTD--IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
           KN + D  +  ++ ++   CL G + +A     +ML+ GF+P +I +N LLN LCK G +
Sbjct: 111 KNFEYDDSLSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYI 170

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNV 406
           ++A      + + G +P+ +SY T+I+GLC   ++ KA  +L S L K  + P     N+
Sbjct: 171 EKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKAL-YLFSTLNKYGIKPNRVTCNI 229

Query: 407 IIDGYGRCGDLSNAFS--IRDLMLSFGVSSNVFTFNALILAET--RGGSIFDAFSLKKEM 462
           I+    + G + N  +  + +++ S  V++ +      IL ++  + G++  A  + KEM
Sbjct: 230 IVHALCQKGVIGNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEM 289

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
               +  D   YN++I   C+ G++  A     +M++RG+ PD+ TY  LI   C  G  
Sbjct: 290 SQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKF 349

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             A ++   +Q +G+A D I ++++ +      + D+A +  Q  L R+
Sbjct: 350 DVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRS 398


>gi|18420848|ref|NP_568460.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75154065|sp|Q8L6Y3.1|PP396_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g24830
 gi|22655280|gb|AAM98230.1| putative protein [Arabidopsis thaliana]
 gi|30725398|gb|AAP37721.1| At5g24830 [Arabidopsis thaliana]
 gi|332005984|gb|AED93367.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 593

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 303/583 (51%), Positives = 402/583 (68%), Gaps = 17/583 (2%)

Query: 1   MALFIACGESSSPVHIQILRFLYQTFDSIKLNVAR----IFSNSRTCSDDDNLPCTLNDI 56
           MAL I+CGE +S     + R L Q+ D +  NV+R    IF+N R    +  L C +   
Sbjct: 1   MALLISCGEVTSS-QFTVFRLLNQSLDFVSDNVSRLLAPIFTNLR--DFEMRLSC-IERP 56

Query: 57  MSYVGDQCRSKTRHWFSN-KDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLE 115
            S  G+     T  WFS+ KD D + +P+A+FN LD ILK +LDRL ++R++  V  T  
Sbjct: 57  PSISGNHSHLCTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRES--VCQTKS 114

Query: 116 TDY----RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
            DY      H +++RDLCL GK+  ALWLR+KMI  G +P ++THN+L+N LCK G +EK
Sbjct: 115 FDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEK 174

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           AD ++REM EM PSPNC +YN  I G C VN +DKAL+LF+TM   GIRPNRVT NI+VH
Sbjct: 175 ADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVH 234

Query: 232 ALCKKGLLGDA-VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           ALC+KG++G+   K L E+L      A  D++  TILMDS FKNG+  QAL +W +M QK
Sbjct: 235 ALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQK 294

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
           N+  D V YNV+I G C +G++ +A+ + C M+KRG  PDV TYNTL++ LCK+GK DEA
Sbjct: 295 NVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEA 354

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +G +   GVAPDQISYK IIQGLCIHGD+ +A EFLLSML+ S++PE  +WNV+IDG
Sbjct: 355 CDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDG 414

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           YGR GD S+A S+ +LMLS+GV  NV+T NALI    +GG + DA+ +K EM    I PD
Sbjct: 415 YGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPD 474

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             TYNLL+GA+C LGH+ LA QLYDEMLRRG  PDIITYTEL++G C +G +K+AE + +
Sbjct: 475 TTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLS 534

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL-LRNK 572
           +IQ  G+ IDH+PF IL K+Y R++   +A  +++KWL  RN+
Sbjct: 535 RIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNR 577


>gi|26449752|dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]
          Length = 593

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 300/581 (51%), Positives = 401/581 (69%), Gaps = 13/581 (2%)

Query: 1   MALFIACGESSSPVHIQILRFLYQTFDSIKLNVAR----IFSNSRTCSDDDNLPCTLNDI 56
           MAL I+CGE +S     + R L Q+ D +  NV+R    IF+N R    +  L C +   
Sbjct: 1   MALLISCGEVTSS-QFTVFRLLNQSLDFVSDNVSRLLAPIFTNLRDL--EMRLSC-IERP 56

Query: 57  MSYVGDQCRSKTRHWFSN-KDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLE 115
            S  G+     T  WFS+ KD D + +P+A+FN LD ILK +LDRL ++R++     + +
Sbjct: 57  PSISGNHSHLCTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQAKSFD 116

Query: 116 TD--YRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            D     H +++RDLCL GK+  ALWLR+KMI  G +P ++THN+L+N LCK G +EKAD
Sbjct: 117 YDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKAD 176

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++REM EM PSPNC +YN  I G C VN +DKAL+LF+TM   GIRPNRVT NI+VHAL
Sbjct: 177 GLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHAL 236

Query: 234 CKKGLLGDA-VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           C+KG++G+   K L E+L      A  D++  TILMDS FKNG+  QAL +W +M QKN+
Sbjct: 237 CQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNV 296

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D V YNV+I G C +G++ +A+ + C M+KRG  PDV TYNTL++ LCK+GK DEA  
Sbjct: 297 PADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACD 356

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            +G +   GVAPDQISYK IIQGLCIHGD+ +A EFLLSML+ S++PE  +WNV+IDGYG
Sbjct: 357 LHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYG 416

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           R GD S+A S+ +LMLS+GV  NV+T NALI    +GG + DA+ +K EM    I PD  
Sbjct: 417 RYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTT 476

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TYNLL+GA+C LGH+ LA QLYDEMLRRG  PDIITYTEL++G C +G +K+AE + ++I
Sbjct: 477 TYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRI 536

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL-LRNK 572
           Q  G+ IDH+PF IL K+Y R++   +A  +++KWL  RN+
Sbjct: 537 QATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNR 577


>gi|356546358|ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Glycine max]
          Length = 577

 Score =  563 bits (1451), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 294/562 (52%), Positives = 374/562 (66%), Gaps = 13/562 (2%)

Query: 19  LRFLYQTFDSIKLNV-ARIFSNSRTCSDDDNLPCTLNDIMSYVGDQCRSKTRHWFSNKDS 77
           L FL +TF SIK  + ARI            +   ++D  S    +C        SN   
Sbjct: 17  LIFLNRTFLSIKRRLLARILRYQNDAVAHSRIFREVDD--SATEKKCELNAGDCLSN--- 71

Query: 78  DNEGNPQAVFNALDLILKENLDRLKTMRD------TG-PVRCTLETDYRRHVAVIRDLCL 130
           D      AVFNALD +LK++L+RLK MR+      TG  +    E+ Y    A IR LCL
Sbjct: 72  DGGNGRHAVFNALDTMLKDSLERLKMMRENLCLVKTGLTIGYACESKYAEDTATIRRLCL 131

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK+G A+WL  KM QKG V DV THN++VN LCKIG L+KAD V+REM E  P PNCAT
Sbjct: 132 DGKLGAAVWLWGKMAQKGVVSDVFTHNHIVNGLCKIGLLDKADLVVREMLEFGPRPNCAT 191

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I GYC VN +D+AL+LFSTM   GI PNRVT  ILVHALC+KGLL +A + L EVL
Sbjct: 192 YNTLIKGYCAVNGVDRALYLFSTMTYAGILPNRVTCRILVHALCEKGLLMEAKRMLEEVL 251

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
            DDD K   D++ ST+ MDSYFK+G   QAL LWN M Q   + D+VAYNVLINGFC + 
Sbjct: 252 KDDDEKDIPDLVISTVFMDSYFKDGAIIQALNLWNQMLQNCTKVDVVAYNVLINGFCKSQ 311

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            ++ A+ Y C+M K+G LPD  TYN ++  LCK+GK+ EA +  GV+S  G+ PDQI+Y+
Sbjct: 312 QMNLAYGYACEMFKKGLLPDAFTYNIIIGALCKEGKISEACYTVGVMSNMGIMPDQITYQ 371

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +I+GLC  G+IV+A+  L  ML   +VP+P IWN+IID YGR  DLSNAF  RD MLSF
Sbjct: 372 IVIRGLCFAGEIVRAKHLLWCMLNNLMVPKPLIWNLIIDLYGRYNDLSNAFFTRDQMLSF 431

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV  NVFT+NALILA+ + G+   A SLK+EM+   +FPDV TYNLLIGA+CN+G +  A
Sbjct: 432 GVCPNVFTYNALILAQVKSGNFHGACSLKEEMISKCLFPDVVTYNLLIGAACNIGRLDFA 491

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L L+D+M++RG  PD+ITYTEL++G C RG MKEAEE++AKI   GL  DH+P +IL  +
Sbjct: 492 LLLHDQMVQRGYEPDLITYTELVRGFCIRGKMKEAEELYAKILKSGLLNDHVPVQILFNK 551

Query: 551 YRRMKESDKARDIHQKWLLRNK 572
           Y ++KE   A + +Q WL   K
Sbjct: 552 YCKLKEPVIAFNFYQDWLESKK 573


>gi|224115578|ref|XP_002332091.1| predicted protein [Populus trichocarpa]
 gi|222874911|gb|EEF12042.1| predicted protein [Populus trichocarpa]
          Length = 521

 Score =  553 bits (1425), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 284/510 (55%), Positives = 362/510 (70%), Gaps = 26/510 (5%)

Query: 73  SNKDSDNEGNPQAVFNALDLILKENLDRLKTMR--------DTGPVRCTLETDYRRHVAV 124
           +NK  D  G    VFN LD +LK +LDRLK+MR          G   C L+ +   + A+
Sbjct: 11  NNKQGDGGGGDPLVFNVLDSMLKGSLDRLKSMRLQFVSFLYGKGITGCALDVNCAGNEAI 70

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I+DLCLGGK+G ALWLR KMIQKG VPDVLTHNY+VN LCK+ +LEKAD +IREM +  P
Sbjct: 71  IKDLCLGGKLGPALWLRSKMIQKGFVPDVLTHNYMVNGLCKMIELEKADWLIREMLDKGP 130

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           SPNCATYN FI GYC ++++DKALHLFS+MAN+G +PNRVT N L+HALCKK LL +  K
Sbjct: 131 SPNCATYNTFIKGYCLLDKVDKALHLFSSMANSGTKPNRVTFNTLLHALCKKDLLTEGKK 190

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            LGE+L  DDG+  +           +F    ++ + A +            + +NV   
Sbjct: 191 LLGEIL--DDGRKGNIKCYHLNYTYGWFYQEWRYSSGAWY------------LGFNV--G 234

Query: 305 GFCLNG--DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           G   NG  ++  A++Y CQMLK G LPDV TYNTL++ LCK GKLDEA + + V+ + GV
Sbjct: 235 GGYPNGSREMKLAYSYSCQMLKMGLLPDVFTYNTLVSSLCKSGKLDEACYMHDVMLRMGV 294

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           APD++SYK IIQGLC+ GD+ KA  +L   LEKS++PEP +WN+IIDGYGRCGD+ NAF+
Sbjct: 295 APDEVSYKLIIQGLCVCGDVDKANGYLNCTLEKSMIPEPLVWNLIIDGYGRCGDICNAFA 354

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           IRD MLSFGV  NVFT+NALI A+ + G+I  A+ LKK+MLL G+FPDV TYNLLIGA+ 
Sbjct: 355 IRDRMLSFGVVPNVFTYNALIHAQVKIGNILYAYFLKKDMLLKGLFPDVVTYNLLIGAAA 414

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           + GHIH ALQLYDEMLR G  PD+ITYTELI+G+C + N KEAEE+ AK+   GL IDH+
Sbjct: 415 HAGHIHYALQLYDEMLRGGCNPDMITYTELIRGYCVKYNTKEAEELLAKLLKSGLLIDHV 474

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           PF+IL K+Y +MKE D+A  +++KWL  NK
Sbjct: 475 PFQILIKQYCKMKEPDRAFQLYRKWLTGNK 504


>gi|296083392|emb|CBI23347.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 261/452 (57%), Positives = 322/452 (71%), Gaps = 41/452 (9%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           CTLE DY   VA+IR+LCL GK+  ALWLR KMIQKG +PDVLTHNYLVN LCK GDLEK
Sbjct: 18  CTLEMDYTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEK 77

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           AD+++REM E+ PSPNCAT+N FI GYC  N +DKAL+LFSTMAN+GI PN+VT+NIL+H
Sbjct: 78  ADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIH 137

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
           ALCKKGLL DA K L ++L DD GK TSD+ITSTI MD   K GD  QAL  W++M Q+ 
Sbjct: 138 ALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRG 197

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
            Q D+VAYNVLI+GFCL  D++SA+ YFC+M KRG LPD+ TYNTL++  CK G LDEA 
Sbjct: 198 TQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEAC 257

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
           + +GV+SK G APD ISYK IIQGLCIHGD+++A +FL+ MLE  +VPEP IWNV+IDG+
Sbjct: 258 YIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGH 317

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
           GR GDLSNA SIRD M+SFG+  NVFT+NALI A+ +GG+I DA S+KKEMLL+GI+PD 
Sbjct: 318 GRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPD- 376

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
                LI   C  GH+  A +L  ++ R G                              
Sbjct: 377 -----LIRGFCIRGHVMEAEELLAKLQRSG------------------------------ 401

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
                L+IDH PF+IL ++Y R +   +A D+
Sbjct: 402 -----LSIDHAPFQILIQKYCRTRVPGRAYDL 428



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 106/227 (46%), Gaps = 3/227 (1%)

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           LC +GKL  A      + + GV PD +++  ++ GLC  GD+ KA   +  MLE    P 
Sbjct: 34  LCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPN 93

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +N  I GY    ++  A  +   M + G+  N  T+N LI A  + G + DA  L +
Sbjct: 94  CATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLE 153

Query: 461 EMLLDGI---FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           ++L D       D+ T  + +      G +  AL  +DEML+RG   D++ Y  LI G C
Sbjct: 154 KILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFC 213

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
              +M  A   F ++   GL  D   +  L   + ++   D+A  IH
Sbjct: 214 LIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIH 260


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 234/448 (52%), Gaps = 3/448 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G +  A  L      +G  P +LT+N ++  LCKIG  ++A  V+ EM ++
Sbjct: 297 TLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL 356

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +PN ATYN  +   CR + + +A  +F  M+  G+ P+ V+ + L+  L + G L  A
Sbjct: 357 GLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQA 416

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E+   +      D +  TIL+D + +NG    AL + ++M  +    D+V YN  
Sbjct: 417 LMHFREM---ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +NG C     + A   F +M++RG +PD  T+ TL+   CK G +D+A + +  + +T +
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD+++Y T+I G C  G++ +A+E    M+ K ++P+   +  +++G+   G L  A +
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALN 593

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D ML  G+  N+ T N LI    R G +  A+    +M+ +GI PD F+YN LI    
Sbjct: 594 LCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYL 653

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
              ++  A  L +EM +RG+  +IITY  ++ G CA G M+EAE+V  K+  +G+  D  
Sbjct: 654 KEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGA 713

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLR 570
            +  L   +       +A   H + L R
Sbjct: 714 TYSSLINGHVSQDNMKEAFRFHDEMLQR 741



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/418 (31%), Positives = 214/418 (51%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  LC  GK   A  +  +M+Q G  P+  T+N L+ E+C+  ++ +A  +  EMS  
Sbjct: 332 AILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRR 391

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  ++++ I    R   L +AL  F  M  +GI P+ V + IL+   C+ G L DA
Sbjct: 392 GVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDA 451

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K   E+LA        DV+T    ++   K      A  L+N+M ++ +  D   +  L
Sbjct: 452 LKMRDEMLARG---CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTL 508

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G+C +G++  A   F  M++    PD +TYNTL++  CK G++  A   +  + +  +
Sbjct: 509 IRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDI 568

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ISY T++ G C  G + +A      MLEK + P     N +I GY R GD+  A+ 
Sbjct: 569 IPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYE 628

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
               M+S G+  + F++N LI    +  ++  AF L  EM   G+  ++ TYNL++   C
Sbjct: 629 YLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFC 688

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             G +  A Q+  +M+  GI PD  TY+ LI GH ++ NMKEA     ++   GL  D
Sbjct: 689 AEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 196/392 (50%), Gaps = 5/392 (1%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           L ++ LV    +   L +     + +     S +    N  + G  R   +D A  ++  
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT-SDVITSTILMDSYF 272
           +   GI  N  T NI+V+ALCK     + + FL    +D +GK   +D++T   L+++Y 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFL----SDMEGKGVFADIVTYNTLINAYC 303

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           + G   +A  L N    + ++  ++ YN ++ G C  G    A     +ML+ G  P+  
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAA 363

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TYNTLL  +C++  + EA   +  +S+ GV PD +S+ ++I  L  +G + +A      M
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM 423

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
               +VP+  I+ ++IDG+ R G LS+A  +RD ML+ G   +V T+N  +    +    
Sbjct: 424 ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMF 483

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            DA  L  EM+  G+ PD +T+  LI   C  G++  AL L++ M+R  + PD +TY  L
Sbjct: 484 ADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           I G C  G M  A+E++  +    +  DHI +
Sbjct: 544 IDGFCKAGEMGRAKELWDDMIRKDIIPDHISY 575



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 167/312 (53%), Gaps = 3/312 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I   C  G +  AL +R +M+ +G   DV+T+N  +N LCK      AD +  EM 
Sbjct: 435 YTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV 494

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    P+  T+   I GYC+   +DKAL+LF  M    ++P++VT+N L+   CK G +G
Sbjct: 495 ERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMG 554

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A +   +++  D      D I+   +++ +  +G   +AL L + M +K I+ ++V  N
Sbjct: 555 RAKELWDDMIRKD---IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCN 611

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI G+C +GD+  A+ Y  +M+  G +PD  +YNTL++   K+  L++A      + K 
Sbjct: 612 TLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+  + I+Y  I+ G C  G + +A + L  M+E  + P+   ++ +I+G+    ++  A
Sbjct: 672 GLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEA 731

Query: 421 FSIRDLMLSFGV 432
           F   D ML  G+
Sbjct: 732 FRFHDEMLQRGL 743



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 146/292 (50%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  ++ ++ +  I+ ++   N+++N  C +    +   +   M  +G   D++TYNTL+N
Sbjct: 241 AWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLIN 300

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C++G ++EA       S  G+ P  ++Y  I+ GLC  G   +A++ L+ ML+  + P
Sbjct: 301 AYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTP 360

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +N ++    R  ++  A  I D M   GV  ++ +F++LI    R G ++ A    
Sbjct: 361 NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHF 420

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           +EM   GI PD   Y +LI   C  G +  AL++ DEML RG   D++TY   + G C +
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
               +A+ +F ++   G+  D   F  L + Y +    DKA ++ +  +  N
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 130/249 (52%), Gaps = 3/249 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D+     +IR  C  G +  AL L   M++    PD +T+N L++  CK G++ +A  + 
Sbjct: 501 DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELW 560

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M      P+  +Y   + G+C    L +AL+L   M   GIRPN VT N L+   C+ 
Sbjct: 561 DDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS 620

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G +  A ++L +++++       D  +   L+D Y K  +  +A  L N+M ++ +Q +I
Sbjct: 621 GDMPKAYEYLSKMISNG---IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNI 677

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + YN+++NGFC  G +  A     +M++ G  PD  TY++L+N    Q  + EA  F+  
Sbjct: 678 ITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDE 737

Query: 357 LSKTGVAPD 365
           + + G+ PD
Sbjct: 738 MLQRGLVPD 746



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 127/267 (47%), Gaps = 3/267 (1%)

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y++L+  +     +      F  + ++G    +   N LL  L + G +D A   YG + 
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           + G+  +  +   ++  LC          FL  M  K V  +   +N +I+ Y R G + 
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            AF + +   S G+   + T+NA++    + G    A  +  EML  G+ P+  TYN L+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C   +I  A +++DEM RRG+ PD+++++ LI      G++ +A   F +++  G+ 
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 539 IDHIPFRILKKRYRR---MKESDKARD 562
            D++ + IL   + R   + ++ K RD
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRD 456



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 101/216 (46%)

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           + Y+ L+    +  KL E S  + +L + GV+    +   ++ GL   G +  A E    
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           ++   +    +  N++++   +     N       M   GV +++ T+N LI A  R G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + +AF L       G+ P + TYN ++   C +G    A  +  EML+ G+TP+  TY  
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           L+   C R N+ EA+E+F ++   G+  D + F  L
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSL 403



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/161 (21%), Positives = 77/161 (47%)

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
           I+++++  Y +   L        ++   GVS ++   N L+    R G +  A+ +  E+
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           +  GI  +V+T N+++ A C        +    +M  +G+  DI+TY  LI  +C  G +
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           +EA ++     + G+    + +  +     ++ + D+A+D+
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDV 349


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 234/448 (52%), Gaps = 3/448 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G +  A  L      +G  P +LT+N ++  LCKIG  ++A  V+ EM ++
Sbjct: 297 TLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL 356

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +PN ATYN  +   CR + + +A  +F  M+  G+ P+ V+ + L+  L + G L  A
Sbjct: 357 GLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQA 416

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E+   +      D +  TIL+D + +NG    AL + ++M  +    D+V YN  
Sbjct: 417 LMHFREM---ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +NG C     + A   F +M++RG +PD  T+ TL+   CK G +D+A + +  + +T +
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD+++Y T+I G C  G++ +A+E    M+ K ++P+   +  +++G+   G L  A +
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALN 593

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D ML  G+  N+ T N LI    R G +  A+    +M+ +GI PD F+YN LI    
Sbjct: 594 LCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYL 653

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
              ++  A  L +EM +RG+  +IITY  ++ G CA G M+EAE+V  K+  +G+  D  
Sbjct: 654 KEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGA 713

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLR 570
            +  L   +       +A   H + L R
Sbjct: 714 TYSSLINGHVSQDNMKEAFRFHDEMLQR 741



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/418 (31%), Positives = 214/418 (51%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  LC  GK   A  +  +M+Q G  P+  T+N L+ E+C+  ++ +A  +  EMS  
Sbjct: 332 AILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRR 391

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  ++++ I    R   L +AL  F  M  +GI P+ V + IL+   C+ G L DA
Sbjct: 392 GVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDA 451

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K   E+LA        DV+T    ++   K      A  L+N+M ++ +  D   +  L
Sbjct: 452 LKMRDEMLARG---CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTL 508

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G+C +G++  A   F  M++    PD +TYNTL++  CK G++  A   +  + +  +
Sbjct: 509 IRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDI 568

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ISY T++ G C  G + +A      MLEK + P     N +I GY R GD+  A+ 
Sbjct: 569 IPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYE 628

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
               M+S G+  + F++N LI    +  ++  AF L  EM   G+  ++ TYNL++   C
Sbjct: 629 YLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFC 688

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             G +  A Q+  +M+  GI PD  TY+ LI GH ++ NMKEA     ++   GL  D
Sbjct: 689 AEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 196/392 (50%), Gaps = 5/392 (1%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           L ++ LV    +   L +     + +     S +    N  + G  R   +D A  ++  
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT-SDVITSTILMDSYF 272
           +   GI  N  T NI+V+ALCK     + + FL    +D +GK   +D++T   L+++Y 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFL----SDMEGKGVFADIVTYNTLINAYC 303

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           + G   +A  L N    + ++  ++ YN ++ G C  G    A     +ML+ G  P+  
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAA 363

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TYNTLL  +C++  + EA   +  +S+ GV PD +S+ ++I  L  +G + +A      M
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM 423

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
               +VP+  I+ ++IDG+ R G LS+A  +RD ML+ G   +V T+N  +    +    
Sbjct: 424 ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMF 483

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            DA  L  EM+  G+ PD +T+  LI   C  G++  AL L++ M+R  + PD +TY  L
Sbjct: 484 ADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           I G C  G M  A+E++  +    +  DHI +
Sbjct: 544 IDGFCKAGEMGRAKELWDDMIRKDIIPDHISY 575



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 167/312 (53%), Gaps = 3/312 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I   C  G +  AL +R +M+ +G   DV+T+N  +N LCK      AD +  EM 
Sbjct: 435 YTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV 494

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    P+  T+   I GYC+   +DKAL+LF  M    ++P++VT+N L+   CK G +G
Sbjct: 495 ERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMG 554

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A +   +++  D      D I+   +++ +  +G   +AL L + M +K I+ ++V  N
Sbjct: 555 RAKELWDDMIRKD---IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCN 611

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI G+C +GD+  A+ Y  +M+  G +PD  +YNTL++   K+  L++A      + K 
Sbjct: 612 TLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+  + I+Y  I+ G C  G + +A + L  M+E  + P+   ++ +I+G+    ++  A
Sbjct: 672 GLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEA 731

Query: 421 FSIRDLMLSFGV 432
           F   D ML  G+
Sbjct: 732 FRFHDEMLQRGL 743



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 146/292 (50%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  ++ ++ +  I+ ++   N+++N  C +    +   +   M  +G   D++TYNTL+N
Sbjct: 241 AWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLIN 300

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C++G ++EA       S  G+ P  ++Y  I+ GLC  G   +A++ L+ ML+  + P
Sbjct: 301 AYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTP 360

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +N ++    R  ++  A  I D M   GV  ++ +F++LI    R G ++ A    
Sbjct: 361 NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHF 420

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           +EM   GI PD   Y +LI   C  G +  AL++ DEML RG   D++TY   + G C +
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
               +A+ +F ++   G+  D   F  L + Y +    DKA ++ +  +  N
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 130/249 (52%), Gaps = 3/249 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D+     +IR  C  G +  AL L   M++    PD +T+N L++  CK G++ +A  + 
Sbjct: 501 DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELW 560

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M      P+  +Y   + G+C    L +AL+L   M   GIRPN VT N L+   C+ 
Sbjct: 561 DDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS 620

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G +  A ++L +++++       D  +   L+D Y K  +  +A  L N+M ++ +Q +I
Sbjct: 621 GDMPKAYEYLSKMISNG---IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNI 677

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + YN+++NGFC  G +  A     +M++ G  PD  TY++L+N    Q  + EA  F+  
Sbjct: 678 ITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDE 737

Query: 357 LSKTGVAPD 365
           + + G+ PD
Sbjct: 738 MLQRGLVPD 746



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 127/267 (47%), Gaps = 3/267 (1%)

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y++L+  +     +      F  + ++G    +   N LL  L + G +D A   YG + 
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           + G+  +  +   ++  LC          FL  M  K V  +   +N +I+ Y R G + 
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            AF + +   S G+   + T+NA++    + G    A  +  EML  G+ P+  TYN L+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C   +I  A +++DEM RRG+ PD+++++ LI      G++ +A   F +++  G+ 
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 539 IDHIPFRILKKRYRR---MKESDKARD 562
            D++ + IL   + R   + ++ K RD
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRD 456



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 101/216 (46%)

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           + Y+ L+    +  KL E S  + +L + GV+    +   ++ GL   G +  A E    
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           ++   +    +  N++++   +     N       M   GV +++ T+N LI A  R G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + +AF L       G+ P + TYN ++   C +G    A  +  EML+ G+TP+  TY  
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           L+   C R N+ EA+E+F ++   G+  D + F  L
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSL 403



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/161 (21%), Positives = 77/161 (47%)

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
           I+++++  Y +   L        ++   GVS ++   N L+    R G +  A+ +  E+
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           +  GI  +V+T N+++ A C        +    +M  +G+  DI+TY  LI  +C  G +
Sbjct: 249 VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           +EA ++     + G+    + +  +     ++ + D+A+D+
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDV 349


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 142/440 (32%), Positives = 235/440 (53%), Gaps = 3/440 (0%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            VI  +C  G+I  A  L   M  KG  PDV++++ ++N  C+ G+L+K   +I +M +  
Sbjct: 675  VIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKG 734

Query: 184  PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              PN  TY + I   CR+ +L +A   FS M   GI P+ + +  LV   CK+G +  A 
Sbjct: 735  LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAAS 794

Query: 244  KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            KF  E+ + D    T DV+T T ++  + + GD  +A  L+++M  + ++ DI+ +  L+
Sbjct: 795  KFFYEMHSRD---ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELM 851

Query: 304  NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            NG+C  G I  AF     M++ G  P+V+TY TL++ LCK+G LD A+     + K G+ 
Sbjct: 852  NGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 911

Query: 364  PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            P+  +Y +I+ GLC  G+I +A + +       +  +   +  ++D Y + G++  A  I
Sbjct: 912  PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 971

Query: 424  RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
               ML  G+   + TFN L+      G + D   L   ML  GI P+  T+N L+   C 
Sbjct: 972  LTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCI 1031

Query: 484  LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              ++  A  +Y +M  RG+ PD  TY  L+KGHC   NMKEA  +F +++  G ++    
Sbjct: 1032 RNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVST 1091

Query: 544  FRILKKRYRRMKESDKARDI 563
            + +L K + + K+  +AR+I
Sbjct: 1092 YSVLIKGFFKRKKFVEAREI 1111



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 221/446 (49%), Gaps = 24/446 (5%)

Query: 121 HVAVI-RDLCLGGKIGTALWLRRKM-IQKGTVP--DVLTHNY------------LVNELC 164
           H+AV  +DL +   + ++ W R K+ + +  V   D+L + Y                L 
Sbjct: 550 HLAVASKDLKVAQSLISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLV 609

Query: 165 KIGDLEKADHVIREM---SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP 221
           + G L +A  V  +M     +    +C  Y A ++  C  N+   A+ +F      G+  
Sbjct: 610 EFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDC--NKTATAIIVFREFPEVGVCW 667

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           N  ++NI++H +C+ G + +A   L  +L +  G  T DVI+ + +++ Y + G+  +  
Sbjct: 668 NVASYNIVIHFVCQLGRINEAHHLL--LLMELKG-YTPDVISYSTVINGYCRFGELDKVW 724

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            L   M QK ++ +   Y  +I   C    ++ A   F +M+ +G LPD I Y TL++  
Sbjct: 725 KLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGF 784

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK+G +  AS F+  +    + PD ++Y  II G C  GD+V+A +    ML + + P+ 
Sbjct: 785 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDI 844

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +  +++GY + G + +AF + + M+  G S NV T+  LI    + G +  A  L  E
Sbjct: 845 ITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 904

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           M   G+ P++FTYN ++   C  G+I  A++L  E    G+  D +TYT L+  +C  G 
Sbjct: 905 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 964

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRIL 547
           M +A+E+  ++   GL    + F +L
Sbjct: 965 MDKAQEILTEMLGKGLQPTIVTFNVL 990



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 146/327 (44%), Gaps = 38/327 (11%)

Query: 114  LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            LE D      ++   C  G I  A  +   MIQ G  P+V+T+  L++ LCK GDL+ A+
Sbjct: 840  LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 899

Query: 174  HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             ++ EM ++   PN  TYN+ + G C+   +++A+ L       G+  + VT+  L+ A 
Sbjct: 900  ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 959

Query: 234  CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            CK G +  A + L E+L                                       K +Q
Sbjct: 960  CKSGEMDKAQEILTEMLG--------------------------------------KGLQ 981

Query: 294  TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
              IV +NVL+NGFCL+G +         ML +G  P+  T+N L+   C +  L  A+  
Sbjct: 982  PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAI 1041

Query: 354  YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
            Y  +   GV PD  +Y+ +++G C   ++ +A      M  K        ++V+I G+ +
Sbjct: 1042 YKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFK 1101

Query: 414  CGDLSNAFSIRDLMLSFGVSSNVFTFN 440
                  A  I D M   G++++   F+
Sbjct: 1102 RKKFVEAREIFDQMRRDGLAADKEIFD 1128



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 129/256 (50%), Gaps = 1/256 (0%)

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           ++A   F +  + G   +V +YN +++ +C+ G+++EA H   ++   G  PD ISY T+
Sbjct: 651 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTV 710

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I G C  G++ K  + +  M +K + P  + +  II    R   L+ A      M+  G+
Sbjct: 711 INGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGI 770

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +   +  L+    + G I  A     EM    I PDV TY  +I   C +G +  A +
Sbjct: 771 LPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 830

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           L+ EML RG+ PDIIT+TEL+ G+C  G++K+A  V   +   G + + + +  L     
Sbjct: 831 LFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 890

Query: 553 RMKESDKARD-IHQKW 567
           +  + D A + +H+ W
Sbjct: 891 KEGDLDSANELLHEMW 906



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 117/282 (41%), Gaps = 36/282 (12%)

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ-GKLD 348
           K+  +D   ++V        G +  A   F +ML  G +  V + N  L  L K   K  
Sbjct: 592 KDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTA 651

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            A   +    + GV  +  SY  +I  +C  G I +A   LL M  K             
Sbjct: 652 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELK------------- 698

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
                                 G + +V +++ +I    R G +   + L ++M   G+ 
Sbjct: 699 ----------------------GYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLK 736

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P+ +TY  +IG  C +  +  A + + EM+ +GI PD I YT L+ G C RG+++ A + 
Sbjct: 737 PNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKF 796

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           F ++ +  +  D + +  +   + ++ +  +A  +  + L R
Sbjct: 797 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCR 838


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 150/447 (33%), Positives = 230/447 (51%), Gaps = 25/447 (5%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++ G  P+V T+N LV  LC  G LE+A  V+ +M     +PN  TYN  +  +CR  E
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 204 LDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           LD A  + S M   G  +PN VT N +V+ LCK G +  A K   E++ +       DV+
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG---LAPDVV 117

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           +   L+  Y K G   ++LA++++M Q+ +  D+V +  LI+  C  G++  A A   QM
Sbjct: 118 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 177

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            +RG   + +T+  L++  CK+G LD+A      + K G+ P  + Y  +I G C  G +
Sbjct: 178 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 237

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             ARE +  M  K V P+   ++ II GY + G+L +AF +   ML  GV  +  T+++L
Sbjct: 238 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 297

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I        + DA  L + ML  G+ PD FTY  LI   C  G++  AL L+DEM+R+G+
Sbjct: 298 IRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 357

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL-----KKRYRR---- 553
            PD++TY+ LI G       KEA  +  K+       D+I +  L     K  ++     
Sbjct: 358 LPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVAL 417

Query: 554 ---------MKESDKARDIHQKWLLRN 571
                    MKE+DK   ++Q  L RN
Sbjct: 418 LKGFCMKGLMKEADK---VYQSMLDRN 441



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 225/461 (48%), Gaps = 19/461 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM-SEM 182
           ++R LC  G++  A+ +   M   G  P+ +T+N LV   C+ G+L+ A+ V+  M  E 
Sbjct: 16  LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 75

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  T+N+ + G C+   ++ A  +F  M   G+ P+ V++N L+   CK G L ++
Sbjct: 76  NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 135

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E+          DV+T T L+ +  K G+  QA+AL   M ++ ++ + V +  L
Sbjct: 136 LAVFSEMTQRG---LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 192

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC  G +  A     +M K G  P V+ YN L+N  CK G++D A      +    V
Sbjct: 193 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 252

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y TII G C  G++  A +    ML+K V+P+   ++ +I G      L++A  
Sbjct: 253 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 312

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + ML  GV  + FT+  LI    + G++  A SL  EM+  G+ PDV TY++LI    
Sbjct: 313 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 372

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITY---------------TELIKGHCARGNMKEAEE 527
                  A +L  ++      PD I Y                 L+KG C +G MKEA++
Sbjct: 373 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 432

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           V+  +      +D   + IL   + R     KA   H++ L
Sbjct: 433 VYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 473



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 227/446 (50%), Gaps = 22/446 (4%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MR+ G  +  L T      +++  LC  G++  A  +  +M+++G  PDV+++N L++  
Sbjct: 71  MREEGNAKPNLVT----FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 126

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           CK+G L ++  V  EM++    P+  T+ + I   C+   L++A+ L + M   G+R N 
Sbjct: 127 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 186

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           VT   L+   CKKG L DA+  + E+           V+    L++ Y K G    A  L
Sbjct: 187 VTFTALIDGFCKKGFLDDALLAVEEM---RKCGIQPSVVCYNALINGYCKLGRMDLAREL 243

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
             +M  K ++ D+V Y+ +I+G+C  G++ SAF    +MLK+G LPD ITY++L+  LC+
Sbjct: 244 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 303

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
           + +L++A   +  + + GV PD+ +Y T+I G C  G++ KA      M+ K V+P+   
Sbjct: 304 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT 363

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG-----SIFDAFSL 458
           ++V+I+G  +      A  +   +       +   ++AL+L  ++       ++   F +
Sbjct: 364 YSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCM 423

Query: 459 KKEM---------LLDGIFP-DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
           K  M         +LD  +  D   Y++LI   C  G++  AL  + +MLR G +P+  +
Sbjct: 424 KGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTS 483

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQT 534
              L++G    G + EA+     + T
Sbjct: 484 TISLVRGLFEEGMVVEADNAIQDLLT 509



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 195/411 (47%), Gaps = 28/411 (6%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L++ +  +  MR+ G     L  +     A+I   C  G +  AL    +M + G  P V
Sbjct: 167 LEQAVALVAQMRERG-----LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 221

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           + +N L+N  CK+G ++ A  +IREM   R  P+  TY+  I+GYC+V  LD A  L   
Sbjct: 222 VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQK 281

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G+ P+ +T++ L+  LC++  L DA +    +L         D  T T L+D + K
Sbjct: 282 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML---QLGVQPDEFTYTTLIDGHCK 338

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G+  +AL+L ++M +K +  D+V Y+VLING   +     A     ++     +PD I 
Sbjct: 339 EGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIK 398

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y+ L+ C  K       + F  V++             +++G C+ G + +A +   SML
Sbjct: 399 YDALMLCCSK-------AEFKSVVA-------------LLKGFCMKGLMKEADKVYQSML 438

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           +++   +  +++++I G+ R G++  A S    ML  G S N  +  +L+      G + 
Sbjct: 439 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVV 498

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           +A +  +++L      D      LI  +   G++   + +   M R G+ P
Sbjct: 499 EADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 549


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 150/447 (33%), Positives = 230/447 (51%), Gaps = 25/447 (5%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++ G  P+V T+N LV  LC  G LE+A  V+ +M     +PN  TYN  +  +CR  E
Sbjct: 143 MLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202

Query: 204 LDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           LD A  + S M   G  +PN VT N +V+ LCK G +  A K   E++ +       DV+
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG---LAPDVV 259

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           +   L+  Y K G   ++LA++++M Q+ +  D+V +  LI+  C  G++  A A   QM
Sbjct: 260 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 319

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            +RG   + +T+  L++  CK+G LD+A      + K G+ P  + Y  +I G C  G +
Sbjct: 320 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             ARE +  M  K V P+   ++ II GY + G+L +AF +   ML  GV  +  T+++L
Sbjct: 380 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 439

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I        + DA  L + ML  G+ PD FTY  LI   C  G++  AL L+DEM+R+G+
Sbjct: 440 IRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 499

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL-----KKRYRR---- 553
            PD++TY+ LI G       KEA  +  K+       D+I +  L     K  ++     
Sbjct: 500 LPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVAL 559

Query: 554 ---------MKESDKARDIHQKWLLRN 571
                    MKE+DK   ++Q  L RN
Sbjct: 560 LKGFCMKGLMKEADK---VYQSMLDRN 583



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 225/461 (48%), Gaps = 19/461 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM-SEM 182
           ++R LC  G++  A+ +   M   G  P+ +T+N LV   C+ G+L+ A+ V+  M  E 
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 217

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  T+N+ + G C+   ++ A  +F  M   G+ P+ V++N L+   CK G L ++
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 277

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E+          DV+T T L+ +  K G+  QA+AL   M ++ ++ + V +  L
Sbjct: 278 LAVFSEM---TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 334

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC  G +  A     +M K G  P V+ YN L+N  CK G++D A      +    V
Sbjct: 335 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 394

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y TII G C  G++  A +    ML+K V+P+   ++ +I G      L++A  
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 454

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + ML  GV  + FT+  LI    + G++  A SL  EM+  G+ PDV TY++LI    
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITY---------------TELIKGHCARGNMKEAEE 527
                  A +L  ++      PD I Y                 L+KG C +G MKEA++
Sbjct: 515 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 574

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           V+  +      +D   + IL   + R     KA   H++ L
Sbjct: 575 VYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 615



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 226/446 (50%), Gaps = 22/446 (4%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MR+ G  +  L T      +++  LC  G++  A  +  +M+++G  PDV+++N L++  
Sbjct: 213 MREEGNAKPNLVT----FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 268

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           CK+G L ++  V  EM++    P+  T+ + I   C+   L++A+ L + M   G+R N 
Sbjct: 269 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 328

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           VT   L+   CKKG L DA+  + E+           V+    L++ Y K G    A  L
Sbjct: 329 VTFTALIDGFCKKGFLDDALLAVEEM---RKCGIQPSVVCYNALINGYCKLGRMDLAREL 385

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
             +M  K ++ D+V Y+ +I+G+C  G++ SAF    +MLK+G LPD ITY++L+  LC+
Sbjct: 386 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 445

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
           + +L++A   +  + + GV PD+ +Y T+I G C  G++ KA      M+ K V+P+   
Sbjct: 446 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT 505

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG-----SIFDAFSL 458
           ++V+I+G  +      A  +   +       +   ++AL+L  ++       ++   F +
Sbjct: 506 YSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCM 565

Query: 459 KKEML-LDGIFPDVF---------TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
           K  M   D ++  +           Y++LI   C  G++  AL  + +MLR G +P+  +
Sbjct: 566 KGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTS 625

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQT 534
              L++G    G + EA+     + T
Sbjct: 626 TISLVRGLFEEGMVVEADNAIQDLLT 651



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 195/411 (47%), Gaps = 28/411 (6%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L++ +  +  MR+ G     L  +     A+I   C  G +  AL    +M + G  P V
Sbjct: 309 LEQAVALVAQMRERG-----LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 363

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           + +N L+N  CK+G ++ A  +IREM   R  P+  TY+  I+GYC+V  LD A  L   
Sbjct: 364 VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQK 423

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G+ P+ +T++ L+  LC++  L DA +    +L         D  T T L+D + K
Sbjct: 424 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML---QLGVQPDEFTYTTLIDGHCK 480

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G+  +AL+L ++M +K +  D+V Y+VLING   +     A     ++     +PD I 
Sbjct: 481 EGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIK 540

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y+ L+ C  K       + F  V++             +++G C+ G + +A +   SML
Sbjct: 541 YDALMLCCSK-------AEFKSVVA-------------LLKGFCMKGLMKEADKVYQSML 580

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           +++   +  +++++I G+ R G++  A S    ML  G S N  +  +L+      G + 
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVV 640

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           +A +  +++L      D      LI  +   G++   + +   M R G+ P
Sbjct: 641 EADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 691



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 148/303 (48%), Gaps = 6/303 (1%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L D+   +  +F      + M +  +  ++  YN+L+   C  G +  A      M   G
Sbjct: 128 LSDASLPSARRF-----LSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAG 182

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA-PDQISYKTIIQGLCIHGDIVKA 385
             P+ +TYNTL+   C+ G+LD A     ++ + G A P+ +++ +++ GLC  G +  A
Sbjct: 183 CAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGA 242

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           R+    M+ + + P+   +N ++ GY + G L  + ++   M   G+  +V TF +LI A
Sbjct: 243 RKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHA 302

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G++  A +L  +M   G+  +  T+  LI   C  G +  AL   +EM + GI P 
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 362

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           ++ Y  LI G+C  G M  A E+  +++   +  D + +  +   Y ++   D A  ++Q
Sbjct: 363 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 422

Query: 566 KWL 568
           K L
Sbjct: 423 KML 425



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 146/270 (54%), Gaps = 4/270 (1%)

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           + AYN ++     +  + SA  +   ML+ G  P+V TYN L+  LC +G+L+EA    G
Sbjct: 118 VPAYNAVLLALS-DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVG 176

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGR 413
            +   G AP+ ++Y T++   C  G++  A E ++S++ +    +P++  +N +++G  +
Sbjct: 177 DMRGAGCAPNAVTYNTLVAAFCRAGELDGA-ERVVSLMREEGNAKPNLVTFNSMVNGLCK 235

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G +  A  + D M+  G++ +V ++N L+    + G + ++ ++  EM   G+ PDV T
Sbjct: 236 AGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVT 295

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +  LI A+C  G++  A+ L  +M  RG+  + +T+T LI G C +G + +A     +++
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMR 355

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDI 563
             G+    + +  L   Y ++   D AR++
Sbjct: 356 KCGIQPSVVCYNALINGYCKLGRMDLAREL 385


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 150/447 (33%), Positives = 230/447 (51%), Gaps = 25/447 (5%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++ G  P+V T+N LV  LC  G LE+A  V+ +M     +PN  TYN  +  +CR  E
Sbjct: 143 MLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202

Query: 204 LDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           LD A  + S M   G  +PN VT N +V+ LCK G +  A K   E++ +       DV+
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG---LAPDVV 259

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           +   L+  Y K G   ++LA++++M Q+ +  D+V +  LI+  C  G++  A A   QM
Sbjct: 260 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 319

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            +RG   + +T+  L++  CK+G LD+A      + K G+ P  + Y  +I G C  G +
Sbjct: 320 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             ARE +  M  K V P+   ++ II GY + G+L +AF +   ML  GV  +  T+++L
Sbjct: 380 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 439

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I        + DA  L + ML  G+ PD FTY  LI   C  G++  AL L+DEM+R+G+
Sbjct: 440 IRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 499

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL-----KKRYRR---- 553
            PD++TY+ LI G       KEA  +  K+       D+I +  L     K  ++     
Sbjct: 500 LPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVAL 559

Query: 554 ---------MKESDKARDIHQKWLLRN 571
                    MKE+DK   ++Q  L RN
Sbjct: 560 LKGFCMKGLMKEADK---VYQSMLDRN 583



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 225/461 (48%), Gaps = 19/461 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM-SEM 182
           ++R LC  G++  A+ +   M   G  P+ +T+N LV   C+ G+L+ A+ V+  M  E 
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 217

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  T+N+ + G C+   ++ A  +F  M   G+ P+ V++N L+   CK G L ++
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 277

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E+          DV+T T L+ +  K G+  QA+AL   M ++ ++ + V +  L
Sbjct: 278 LAVFSEM---TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 334

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC  G +  A     +M K G  P V+ YN L+N  CK G++D A      +    V
Sbjct: 335 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 394

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y TII G C  G++  A +    ML+K V+P+   ++ +I G      L++A  
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 454

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + ML  GV  + FT+  LI    + G++  A SL  EM+  G+ PDV TY++LI    
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITY---------------TELIKGHCARGNMKEAEE 527
                  A +L  ++      PD I Y                 L+KG C +G MKEA++
Sbjct: 515 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 574

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           V+  +      +D   + IL   + R     KA   H++ L
Sbjct: 575 VYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 615



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 227/446 (50%), Gaps = 22/446 (4%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MR+ G  +  L T      +++  LC  G++  A  +  +M+++G  PDV+++N L++  
Sbjct: 213 MREEGNAKPNLVT----FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 268

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           CK+G L ++  V  EM++    P+  T+ + I   C+   L++A+ L + M   G+R N 
Sbjct: 269 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 328

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           VT   L+   CKKG L DA+  + E+           V+    L++ Y K G    A  L
Sbjct: 329 VTFTALIDGFCKKGFLDDALLAVEEM---RKCGIQPSVVCYNALINGYCKLGRMDLAREL 385

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
             +M  K ++ D+V Y+ +I+G+C  G++ SAF    +MLK+G LPD ITY++L+  LC+
Sbjct: 386 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 445

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
           + +L++A   +  + + GV PD+ +Y T+I G C  G++ KA      M+ K V+P+   
Sbjct: 446 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT 505

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG-----SIFDAFSL 458
           ++V+I+G  +      A  +   +       +   ++AL+L  ++       ++   F +
Sbjct: 506 YSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCM 565

Query: 459 KKEM---------LLDGIFP-DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
           K  M         +LD  +  D   Y++LI   C  G++  AL  + +MLR G +P+  +
Sbjct: 566 KGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTS 625

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQT 534
              L++G    G + EA+     + T
Sbjct: 626 TISLVRGLFEEGMVVEADNAIQDLLT 651



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 142/285 (49%), Gaps = 1/285 (0%)

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           + M +  +  ++  YN+L+   C  G +  A      M   G  P+ +TYNTL+   C+ 
Sbjct: 141 SSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRA 200

Query: 345 GKLDEASHFYGVLSKTGVA-PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
           G+LD A     ++ + G A P+ +++ +++ GLC  G +  AR+    M+ + + P+   
Sbjct: 201 GELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 260

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N ++ GY + G L  + ++   M   G+  +V TF +LI A  + G++  A +L  +M 
Sbjct: 261 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 320

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             G+  +  T+  LI   C  G +  AL   +EM + GI P ++ Y  LI G+C  G M 
Sbjct: 321 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 380

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            A E+  +++   +  D + +  +   Y ++   D A  ++QK L
Sbjct: 381 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML 425



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 164/366 (44%), Gaps = 58/366 (15%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L++ +  +  MR+ G     L  +     A+I   C  G +  AL    +M + G  P V
Sbjct: 309 LEQAVALVAQMRERG-----LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 363

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           + +N L+N  CK+G ++ A  +IREM   R  P+  TY+  I+GYC+V  LD A  L   
Sbjct: 364 VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQK 423

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G+ P+ +T++ L+  LC++  L DA +    +L         D  T T L+D + K
Sbjct: 424 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML---QLGVQPDEFTYTTLIDGHCK 480

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLING---------------------------- 305
            G+  +AL+L ++M +K +  D+V Y+VLING                            
Sbjct: 481 EGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIK 540

Query: 306 ----------------------FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
                                 FC+ G +  A   +  ML R +  D   Y+ L++  C+
Sbjct: 541 YDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCR 600

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G + +A  F+  + ++G +P+  S  ++++GL   G +V+A   +  +L    + +   
Sbjct: 601 GGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEA 660

Query: 404 WNVIID 409
              +ID
Sbjct: 661 SKALID 666



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 146/271 (53%), Gaps = 4/271 (1%)

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
            + AYN ++     +  + SA  +   ML+ G  P+V TYN L+  LC +G+L+EA    
Sbjct: 117 SVPAYNAVLLALS-DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVV 175

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYG 412
           G +   G AP+ ++Y T++   C  G++  A E ++S++ +    +P++  +N +++G  
Sbjct: 176 GDMRGAGCAPNAVTYNTLVAAFCRAGELDGA-ERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           + G +  A  + D M+  G++ +V ++N L+    + G + ++ ++  EM   G+ PDV 
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           T+  LI A+C  G++  A+ L  +M  RG+  + +T+T LI G C +G + +A     ++
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           +  G+    + +  L   Y ++   D AR++
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLAREL 385


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/440 (32%), Positives = 232/440 (52%), Gaps = 3/440 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  +C  G+I  A  L   M  KG  PDV++++ +VN  C+ G+L+K   +I  M    
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN   Y + I   CR+ +L +A   FS M   GI P+ V +  L+   CK+G +  A 
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           KF  E+ + D    T DV+T T ++  + + GD  +A  L+++MF K ++ D V +  LI
Sbjct: 372 KFFYEMHSRD---ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG+C  G +  AF     M++ G  P+V+TY TL++ LCK+G LD A+     + K G+ 
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+  +Y +I+ GLC  G+I +A + +       +  +   +  ++D Y + G++  A  I
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              ML  G+   + TFN L+      G + D   L   ML  GI P+  T+N L+   C 
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
             ++  A  +Y +M  RG+ PD  TY  L+KGHC   NMKEA  +F +++  G ++    
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668

Query: 544 FRILKKRYRRMKESDKARDI 563
           + +L K + + K+  +AR++
Sbjct: 669 YSVLIKGFLKRKKFLEAREV 688



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 227/437 (51%), Gaps = 9/437 (2%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K  TA+ + R+  + G   +V ++N +++ +C++G +++A H++  M     +P+  +Y+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             + GYCR  ELDK   L   M   G++PN   +  ++  LC+   L +A +   E++  
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                  D +  T L+D + K GD   A   + +M  ++I  D++ Y  +I+GFC  GD+
Sbjct: 346 G---ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A   F +M  +G  PD +T+  L+N  CK G + +A   +  + + G +P+ ++Y T+
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I GLC  GD+  A E L  M +  + P    +N I++G  + G++  A  +     + G+
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           +++  T+  L+ A  + G +  A  + KEML  G+ P + T+N+L+   C  G +    +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           L + ML +GI P+  T+  L+K +C R N+K A  ++  + + G+  D   +  L     
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL----- 637

Query: 553 RMKESDKARDIHQKWLL 569
            +K   KAR++ + W L
Sbjct: 638 -VKGHCKARNMKEAWFL 653



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 217/444 (48%), Gaps = 20/444 (4%)

Query: 121 HVAVI-RDLCLGGKIGTALWLRRKM-IQKGTVP--DVLTHNY------------LVNELC 164
           H+AV  +DL +   + ++ W R K+ +    V   D+L + Y                L 
Sbjct: 127 HLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLV 186

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCR-VNELDKALHLFSTMANNGIRPNR 223
             G L +A  V  +M       +  + N ++T   +   +   A+ +F      G+  N 
Sbjct: 187 DFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNV 246

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
            ++NI++H +C+ G + +A   L  +L +  G  T DVI+ + +++ Y + G+  +   L
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLL--LLMELKG-YTPDVISYSTVVNGYCRFGELDKVWKL 303

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
              M +K ++ +   Y  +I   C    ++ A   F +M+++G LPD + Y TL++  CK
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
           +G +  AS F+  +    + PD ++Y  II G C  GD+V+A +    M  K + P+   
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +  +I+GY + G + +AF + + M+  G S NV T+  LI    + G +  A  L  EM 
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             G+ P++FTYN ++   C  G+I  A++L  E    G+  D +TYT L+  +C  G M 
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543

Query: 524 EAEEVFAKIQTLGLAIDHIPFRIL 547
           +A+E+  ++   GL    + F +L
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVL 567



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 147/327 (44%), Gaps = 38/327 (11%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE D      +I   C  G +  A  +   MIQ G  P+V+T+  L++ LCK GDL+ A+
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM ++   PN  TYN+ + G C+   +++A+ L       G+  + VT+  L+ A 
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G +  A + L E+L                                       K +Q
Sbjct: 537 CKSGEMDKAQEILKEMLG--------------------------------------KGLQ 558

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             IV +NVL+NGFCL+G +         ML +G  P+  T+N+L+   C +  L  A+  
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  +   GV PD  +Y+ +++G C   ++ +A      M  K        ++V+I G+ +
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFN 440
                 A  + D M   G++++   F+
Sbjct: 679 RKKFLEAREVFDQMRREGLAADKEIFD 705


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 143/440 (32%), Positives = 232/440 (52%), Gaps = 3/440 (0%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            VI  +C  G+I  A  L   M  KG  PDV++++ +VN  C+ G+L+K   +I  M    
Sbjct: 695  VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 754

Query: 184  PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              PN   Y + I   CR+ +L +A   FS M   GI P+ V +  L+   CK+G +  A 
Sbjct: 755  LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 814

Query: 244  KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            KF  E+ + D    T DV+T T ++  + + GD  +A  L+++MF K ++ D V +  LI
Sbjct: 815  KFFYEMHSRD---ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871

Query: 304  NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            NG+C  G +  AF     M++ G  P+V+TY TL++ LCK+G LD A+     + K G+ 
Sbjct: 872  NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931

Query: 364  PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            P+  +Y +I+ GLC  G+I +A + +       +  +   +  ++D Y + G++  A  I
Sbjct: 932  PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 991

Query: 424  RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
               ML  G+   + TFN L+      G + D   L   ML  GI P+  T+N L+   C 
Sbjct: 992  LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 1051

Query: 484  LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              ++  A  +Y +M  RG+ PD  TY  L+KGHC   NMKEA  +F +++  G ++    
Sbjct: 1052 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 1111

Query: 544  FRILKKRYRRMKESDKARDI 563
            + +L K + + K+  +AR++
Sbjct: 1112 YSVLIKGFLKRKKFLEAREV 1131



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 227/437 (51%), Gaps = 9/437 (2%)

Query: 133  KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
            K  TA+ + R+  + G   +V ++N +++ +C++G +++A H++  M     +P+  +Y+
Sbjct: 669  KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 728

Query: 193  AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
              + GYCR  ELDK   L   M   G++PN   +  ++  LC+   L +A +   E++  
Sbjct: 729  TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 788

Query: 253  DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                   D +  T L+D + K GD   A   + +M  ++I  D++ Y  +I+GFC  GD+
Sbjct: 789  G---ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 845

Query: 313  SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
              A   F +M  +G  PD +T+  L+N  CK G + +A   +  + + G +P+ ++Y T+
Sbjct: 846  VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 905

Query: 373  IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
            I GLC  GD+  A E L  M +  + P    +N I++G  + G++  A  +     + G+
Sbjct: 906  IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 965

Query: 433  SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
            +++  T+  L+ A  + G +  A  + KEML  G+ P + T+N+L+   C  G +    +
Sbjct: 966  NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 1025

Query: 493  LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
            L + ML +GI P+  T+  L+K +C R N+K A  ++  + + G+  D   +  L     
Sbjct: 1026 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL----- 1080

Query: 553  RMKESDKARDIHQKWLL 569
             +K   KAR++ + W L
Sbjct: 1081 -VKGHCKARNMKEAWFL 1096



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 217/444 (48%), Gaps = 20/444 (4%)

Query: 121  HVAVI-RDLCLGGKIGTALWLRRKM-IQKGTVP--DVLTHNY------------LVNELC 164
            H+AV  +DL +   + ++ W R K+ +    V   D+L + Y                L 
Sbjct: 570  HLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLV 629

Query: 165  KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCR-VNELDKALHLFSTMANNGIRPNR 223
              G L +A  V  +M       +  + N ++T   +   +   A+ +F      G+  N 
Sbjct: 630  DFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNV 689

Query: 224  VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
             ++NI++H +C+ G + +A   L  +L +  G  T DVI+ + +++ Y + G+  +   L
Sbjct: 690  ASYNIVIHFVCQLGRIKEAHHLL--LLMELKG-YTPDVISYSTVVNGYCRFGELDKVWKL 746

Query: 284  WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
               M +K ++ +   Y  +I   C    ++ A   F +M+++G LPD + Y TL++  CK
Sbjct: 747  IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 806

Query: 344  QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            +G +  AS F+  +    + PD ++Y  II G C  GD+V+A +    M  K + P+   
Sbjct: 807  RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 866

Query: 404  WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
            +  +I+GY + G + +AF + + M+  G S NV T+  LI    + G +  A  L  EM 
Sbjct: 867  FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926

Query: 464  LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
              G+ P++FTYN ++   C  G+I  A++L  E    G+  D +TYT L+  +C  G M 
Sbjct: 927  KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986

Query: 524  EAEEVFAKIQTLGLAIDHIPFRIL 547
            +A+E+  ++   GL    + F +L
Sbjct: 987  KAQEILKEMLGKGLQPTIVTFNVL 1010



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 147/327 (44%), Gaps = 38/327 (11%)

Query: 114  LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            LE D      +I   C  G +  A  +   MIQ G  P+V+T+  L++ LCK GDL+ A+
Sbjct: 860  LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 919

Query: 174  HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             ++ EM ++   PN  TYN+ + G C+   +++A+ L       G+  + VT+  L+ A 
Sbjct: 920  ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 979

Query: 234  CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            CK G +  A + L E+L                                       K +Q
Sbjct: 980  CKSGEMDKAQEILKEMLG--------------------------------------KGLQ 1001

Query: 294  TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
              IV +NVL+NGFCL+G +         ML +G  P+  T+N+L+   C +  L  A+  
Sbjct: 1002 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 1061

Query: 354  YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
            Y  +   GV PD  +Y+ +++G C   ++ +A      M  K        ++V+I G+ +
Sbjct: 1062 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 1121

Query: 414  CGDLSNAFSIRDLMLSFGVSSNVFTFN 440
                  A  + D M   G++++   F+
Sbjct: 1122 RKKFLEAREVFDQMRREGLAADKEIFD 1148


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 220/397 (55%), Gaps = 3/397 (0%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           +A  + R+MI+    P+V T+N L+   C +G+L+K      EM      PN  TYN  I
Sbjct: 197 SAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLI 256

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
             YC++  +D+A  L  +M++ G++PN +++N++++ LC++G + +A + L E+      
Sbjct: 257 DAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM---GYK 313

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
             T D +T   L++ Y K G+  QAL +  +M +  +   +V Y  LIN  C   +++ A
Sbjct: 314 GFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 373

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
             +F QM  RG  P+  TY TL++   +QG L+EA      ++++G +P  ++Y   I G
Sbjct: 374 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 433

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C+   + +A   +  M+EK + P+   ++ II G+ R G+L  AF ++  M+  GVS +
Sbjct: 434 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPD 493

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             T+++LI        + +A  L +EML  G+ PD FTY  LI A C  G ++ AL L+D
Sbjct: 494 AVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHD 553

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           EM+ +G  PD +TY+ LI G   +   +EA+ +  K+
Sbjct: 554 EMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKL 590



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 197/385 (51%), Gaps = 5/385 (1%)

Query: 186 PNCATYNAFITGYCRVNELDK--ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P   +YN+ +    R     K  A  ++  M  + + PN  T+NIL+   C  G L   +
Sbjct: 175 PGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGL 234

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
              GE+   +      +V+T   L+D+Y K G   +A  L   M  K +Q ++++YNV+I
Sbjct: 235 GCFGEM---ERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVII 291

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C  G +  A+    +M  +GF PD +TYNTLLN  CK+G   +A   +  + + GV+
Sbjct: 292 NGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVS 351

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P  ++Y  +I  +C   ++ +A EF   M  + + P    +  +IDG+ R G L+ A+ I
Sbjct: 352 PSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI 411

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   G S +V T+NA I        + +A  + +EM+  G+ PDV +Y+ +I   C 
Sbjct: 412 LNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCR 471

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A Q+  EM+ +G++PD +TY+ LI+G C    + EA ++  ++  +GL  D   
Sbjct: 472 KGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFT 531

Query: 544 FRILKKRYRRMKESDKARDIHQKWL 568
           +  L   Y    + +KA  +H + +
Sbjct: 532 YTTLINAYCVEGDLNKALHLHDEMI 556



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 219/456 (48%), Gaps = 30/456 (6%)

Query: 104 MRDTGPVRCTLETDYRRHV------------AVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           +R  G V+ + E  YR  +             +IR  C  G++   L    +M + G +P
Sbjct: 188 VRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLP 247

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           +V+T+N L++  CK+G +++A  +++ MS     PN  +YN  I G CR   + +A  + 
Sbjct: 248 NVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEIL 307

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M   G  P+ VT+N L++  CK+G    A+    E++ +     +  V+T T L++S 
Sbjct: 308 EEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG---VSPSVVTYTALINSM 364

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K  +  +A+  ++ M  + ++ +   Y  LI+GF   G ++ A+    +M + GF P V
Sbjct: 365 CKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 424

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TYN  ++  C   +++EA      + + G+APD +SY TII G C  G++ +A +    
Sbjct: 425 VTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE 484

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M+EK V P+   ++ +I G      L+ A  +   ML  G+  + FT+  LI A    G 
Sbjct: 485 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 544

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY-- 509
           +  A  L  EM+  G  PD  TY++LI           A +L  +++     P  +TY  
Sbjct: 545 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDT 604

Query: 510 -------------TELIKGHCARGNMKEAEEVFAKI 532
                          LIKG C +G M EA+ VF  +
Sbjct: 605 LIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESM 640



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 216/424 (50%), Gaps = 18/424 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G+I  A  L + M  KG  P+++++N ++N LC+ G +++A  ++ EM    
Sbjct: 255 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 314

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  TYN  + GYC+     +AL + + M  NG+ P+ VT+  L++++CK   L  A+
Sbjct: 315 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 374

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +F  ++          +  T T L+D + + G   +A  + N+M +      +V YN  I
Sbjct: 375 EFFDQMRIRG---LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI 431

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C+   +  A     +M+++G  PDV++Y+T+++  C++G+LD A      + + GV+
Sbjct: 432 HGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 491

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y ++IQGLC    + +A +    ML+  + P+   +  +I+ Y   GDL+ A  +
Sbjct: 492 PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 551

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M+  G   +  T++ LI    +     +A  L  +++ +   P   TY+ LI    N
Sbjct: 552 HDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSN 611

Query: 484 L---------------GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           +               G +H A ++++ M+ R   P    Y  +I GHC  GN+ +A  +
Sbjct: 612 IEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNL 671

Query: 529 FAKI 532
           + ++
Sbjct: 672 YKEM 675



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 217/453 (47%), Gaps = 25/453 (5%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E    LK+M   G     ++ +   +  +I  LC  G +  A  +  +M  KG  PD 
Sbjct: 265 IDEAFGLLKSMSSKG-----MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDE 319

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N L+N  CK G+  +A  +  EM     SP+  TY A I   C+   L++A+  F  
Sbjct: 320 VTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQ 379

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G+RPN  T+  L+    ++GLL +A + L E+    +   +  V+T    +  +  
Sbjct: 380 MRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM---TESGFSPSVVTYNAFIHGHCV 436

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                +AL +  +M +K +  D+V+Y+ +I+GFC  G++  AF    +M+++G  PD +T
Sbjct: 437 LERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVT 496

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y++L+  LC+  +L EA      +   G+ PD+ +Y T+I   C+ GD+ KA      M+
Sbjct: 497 YSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMI 556

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR-DLMLSFGVSSNVFTFNALI--------- 443
            K  +P+   ++V+I+G  +      A  +   L+    V S+V T++ LI         
Sbjct: 557 HKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV-TYDTLIENCSNIEFK 615

Query: 444 --LAETRG----GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
             +A  +G    G + +A  + + M+     P    YN++I   C  G++  A  LY EM
Sbjct: 616 SVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEM 675

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           +  G  P  +T   LIK     G  +E  EV  
Sbjct: 676 IHSGFVPHTVTVITLIKALFKEGMNEEMSEVIG 708



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 194/411 (47%), Gaps = 18/411 (4%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR  +      + A+I  +C    +  A+    +M  +G  P+  T+  L++   + G L
Sbjct: 346 VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLL 405

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A  ++ EM+E   SP+  TYNAFI G+C +  +++AL +   M   G+ P+ V+++ +
Sbjct: 406 NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTI 465

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +   C+KG L  A +   E++   +   + D +T + L+    +     +A  L  +M  
Sbjct: 466 ISGFCRKGELDRAFQMKQEMV---EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLD 522

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             +  D   Y  LIN +C+ GD++ A     +M+ +GFLPD +TY+ L+N L KQ +  E
Sbjct: 523 MGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTRE 582

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQ---------------GLCIHGDIVKAREFLLSMLE 394
           A      L      P  ++Y T+I+               G C+ G + +A     SM+E
Sbjct: 583 AKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVE 642

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           ++  P   ++NVII G+ R G+L  AF++   M+  G   +  T   LI A  + G   +
Sbjct: 643 RNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE 702

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
              +  + L      +     +L+  +   G++   L +  +M + G+ P+
Sbjct: 703 MSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 2/226 (0%)

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK--AREFLLSMLEKSVVPEPHIW 404
           +D+A +   +   +G  P  +SY +++  +      VK  A E    M+   V P  + +
Sbjct: 158 IDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTY 217

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           N++I G+   G+L         M   G   NV T+N LI A  + G I +AF L K M  
Sbjct: 218 NILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS 277

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            G+ P++ +YN++I   C  G +  A ++ +EM  +G TPD +TY  L+ G+C  GN  +
Sbjct: 278 KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQ 337

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           A  + A++   G++   + +  L     + +  ++A +   +  +R
Sbjct: 338 ALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 383


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/465 (30%), Positives = 242/465 (52%), Gaps = 37/465 (7%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           LK M+++G     L  +   +  VI   C   K+ TA  L R+M++ G +P+++T+N L+
Sbjct: 184 LKEMKESG-----LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLL 238

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           + LC+ G +++A  ++ EM E    P+  +Y+  + G C+  ++D AL +F   +N    
Sbjct: 239 SGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCP 298

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFL------------------------GEVLAD---- 252
           P+ V ++ L+  LCK G L +A K                          G+ L +    
Sbjct: 299 PDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV 358

Query: 253 ----DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
               +D   T +VIT + L+D   K G    A  ++  M  + I+ ++V YN LI+GFC+
Sbjct: 359 LETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCM 418

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
              + SA     +M   G LPD+ITYNTL++ LCK G+  EA+  +G +      PD I+
Sbjct: 419 TNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVIT 478

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I G C    I  AR     ML+++V+P+   ++ +++GY   G + +A  + + M+
Sbjct: 479 YSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMV 538

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           +   S +V+T+ +L+    + G + +A  + K M   G  P+V TY  LI A C  G   
Sbjct: 539 ASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPT 598

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +A +L +EM+  G+ P++ITY  LI G C  G+++EA ++  +++
Sbjct: 599 VAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLE 643



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 228/447 (51%), Gaps = 3/447 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   ++  A     KM +KGTVP+  T+N L+N  CK+  + +A  +++EM E  
Sbjct: 132 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 191

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN  TY+  I G+CR  ++D A  LF  M  NG  PN VT+N L+  LC+ GL+ +A 
Sbjct: 192 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 251

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E+    +     D  +   LM    K G    AL ++ D    +   D+VAY+ LI
Sbjct: 252 ELLDEM---RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 308

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C  G +  A   F +M +    PDV+T+  L++ LCK  +L EA      +      
Sbjct: 309 AGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 368

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ I+Y ++I GLC  G +  A+E    M+ + + P    +N +I G+     + +A  +
Sbjct: 369 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 428

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M + G   ++ T+N LI    + G   +A  L  +M      PDV TY+ LIG  C 
Sbjct: 429 MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK 488

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           L  I +A  L+D+ML++ + PD++T++ L++G+C  G + +AE +  ++     + D   
Sbjct: 489 LERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYT 548

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           +  L   + ++    +AR + ++   R
Sbjct: 549 YTSLVDGFCKVGRMVEARRVLKRMAKR 575



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 216/448 (48%), Gaps = 6/448 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  VI+ LC  G +  A  L  +M + G VPD   +N++++ LCK  +  KA    R M 
Sbjct: 62  YAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME 121

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
             +   N  T+   I G C+ N L +A   F+ M   G  PN  T+N+L++  CK   + 
Sbjct: 122 CEK---NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVH 178

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A   L E+    +     +V+T + ++  + +      A  L+  M +     ++V YN
Sbjct: 179 RAYLLLKEM---KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 235

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L++G C NG +  A+    +M +RG  PD  +Y+TL+  LCK GK+D A   +   S  
Sbjct: 236 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 295

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
              PD ++Y T+I GLC  G + +A +    M E S  P+   +  ++DG  +   L  A
Sbjct: 296 DCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 355

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + M     + NV T+++LI    + G + DA  + K M++ GI P+V TYN LI  
Sbjct: 356 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 415

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    +  AL L +EM   G  PDIITY  LI G C  G   EA  +F  ++      D
Sbjct: 416 FCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPD 475

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWL 568
            I +  L   + +++  D AR +    L
Sbjct: 476 VITYSCLIGGFCKLERIDMARTLFDDML 503



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 224/481 (46%), Gaps = 9/481 (1%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           ++ E  + L  MR+ G     L+ D   +  ++  LC  GKI  AL +          PD
Sbjct: 246 LMDEAYELLDEMRERG-----LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 300

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V+ ++ L+  LCK G L++A  +  +M E    P+  T+ A + G C+ + L +A  +  
Sbjct: 301 VVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 360

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
           TM +    PN +T++ L+  LCK G + DA +    ++         +V+T   L+  + 
Sbjct: 361 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG---IEPNVVTYNSLIHGFC 417

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
                  AL L  +M       DI+ YN LI+G C  G    A   F  M  +   PDVI
Sbjct: 418 MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVI 477

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TY+ L+   CK  ++D A   +  + K  V PD +++ T+++G C  G +  A   L  M
Sbjct: 478 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM 537

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +     P+ + +  ++DG+ + G +  A  +   M   G   NV T+ ALI A  R G  
Sbjct: 538 VASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKP 597

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR-RGITPDIITYTE 511
             A+ L +EM+ +G+ P+V TY  LIG  C  G +  A ++ + + R      D+  Y  
Sbjct: 598 TVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRV 657

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           ++ G C  G M  A E+   I+  G    H  +  L +   + KE  KA ++ ++  L  
Sbjct: 658 MMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSR 717

Query: 572 K 572
           K
Sbjct: 718 K 718



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 203/402 (50%), Gaps = 6/402 (1%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           Q+G   +V T+N L   L +   +++  H+++       +PN  TY   I G C+  +LD
Sbjct: 17  QQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLD 76

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           KA  L   M  +G  P+   +N ++HALCK      A+ +   +      +   +VIT T
Sbjct: 77  KACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM------ECEKNVITWT 130

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           I++D   K     +A   +  M +K    +   YNVLINGFC    +  A+    +M + 
Sbjct: 131 IMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKES 190

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  P+V+TY+T+++  C+Q K+D A   +  + + G  P+ ++Y T++ GLC +G + +A
Sbjct: 191 GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEA 250

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E L  M E+ + P+   ++ ++ G  + G +  A  + +   +     +V  ++ LI  
Sbjct: 251 YELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAG 310

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G + +A  L ++M  +   PDV T+  L+   C    +  A Q+ + M  R  TP+
Sbjct: 311 LCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 370

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +ITY+ LI G C  G +++A+EVF ++   G+  + + +  L
Sbjct: 371 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSL 412



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 9/177 (5%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I   C  GK   A  L  +M+  G  P+V+T+  L+   C  GDLE+A  ++  + 
Sbjct: 584 YTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLE 643

Query: 181 EMRPSPNCAT----YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
                 NC      Y   + G CR   +  AL L   +  +G  P    +  L+  LC+ 
Sbjct: 644 R---DENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQG 700

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
             LG A++ L E+      +  ++   + I      + G   +A AL +++     Q
Sbjct: 701 KELGKAMEVLEEMTLSRKSRPNAEAYEAVI--QELAREGRHEEANALADELLGNKGQ 755



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 43/93 (46%)

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +V+TYN L  A      I     +       GITP++ TY  +I+G C  G++ +A E+ 
Sbjct: 23  NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            +++  G   D   +  +     + + + KA D
Sbjct: 83  EEMRESGPVPDAAIYNFVIHALCKARNTAKALD 115


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 127/389 (32%), Positives = 215/389 (55%), Gaps = 3/389 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           MI+    P+V T+N L+   C +G+L+K      EM      PN  TYN  I  YC++  
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D+A  L  +M++ G++PN +++N++++ LC++G + +A + L E+        T D +T
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG---FTPDEVT 117

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              L++ Y K G+  QAL +  +M +  +   +V Y  LIN  C   +++ A  +F QM 
Sbjct: 118 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 177

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            RG  P+  TY TL++   +QG L+EA      ++++G +P  ++Y   I G C+   + 
Sbjct: 178 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 237

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A   +  M+EK + P+   ++ II G+ R G+L  AF ++  M+  GVS +  T+++LI
Sbjct: 238 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 297

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                   + +A  L +EML  G+ PD FTY  LI A C  G ++ AL L+DEM+ +G  
Sbjct: 298 QGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFL 357

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKI 532
           PD +TY+ LI G   +   +EA+ +  K+
Sbjct: 358 PDAVTYSVLINGLNKQARTREAKRLLFKL 386



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 186/355 (52%), Gaps = 3/355 (0%)

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  + + PN  T+NIL+   C  G L   +   GE+   +      +V+T   L+D+Y K
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEM---ERNGCLPNVVTYNTLIDAYCK 57

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +A  L   M  K +Q ++++YNV+ING C  G +  A+    +M  +GF PD +T
Sbjct: 58  MGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVT 117

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YNTLLN  CK+G   +A   +  + + GV+P  ++Y  +I  +C   ++ +A EF   M 
Sbjct: 118 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 177

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            + + P    +  +IDG+ R G L+ A+ I + M   G S +V T+NA I        + 
Sbjct: 178 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 237

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  + +EM+  G+ PDV +Y+ +I   C  G +  A Q+  EM+ +G++PD +TY+ LI
Sbjct: 238 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 297

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +G C    + EA ++  ++  +GL  D   +  L   Y    + +KA  +H + +
Sbjct: 298 QGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMI 352



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 214/438 (48%), Gaps = 18/438 (4%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  +  +   +  +IR  C  G++   L    +M + G +P+V+T+N L++  CK+G +
Sbjct: 2   IRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRI 61

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  +++ MS     PN  +YN  I G CR   + +A  +   M   G  P+ VT+N L
Sbjct: 62  DEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTL 121

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           ++  CK+G    A+    E++ +     +  V+T T L++S  K  +  +A+  ++ M  
Sbjct: 122 LNGYCKEGNFHQALVIHAEMVRNG---VSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 178

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           + ++ +   Y  LI+GF   G ++ A+    +M + GF P V+TYN  ++  C   +++E
Sbjct: 179 RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEE 238

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A      + + G+APD +SY TII G C  G++ +A +    M+EK V P+   ++ +I 
Sbjct: 239 ALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQ 298

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G      L+ A  +   ML  G+  + FT+  LI A    G +  A  L  EM+  G  P
Sbjct: 299 GLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLP 358

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY---------------TELIK 514
           D  TY++LI           A +L  +++     P  +TY                 LIK
Sbjct: 359 DAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIK 418

Query: 515 GHCARGNMKEAEEVFAKI 532
           G C +G M EA+ VF  +
Sbjct: 419 GFCMKGLMHEADRVFESM 436



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 216/425 (50%), Gaps = 18/425 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G+I  A  L + M  KG  P+++++N ++N LC+ G +++A  ++ EM   
Sbjct: 50  TLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK 109

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  TYN  + GYC+     +AL + + M  NG+ P+ VT+  L++++CK   L  A
Sbjct: 110 GFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 169

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++F  ++          +  T T L+D + + G   +A  + N+M +      +V YN  
Sbjct: 170 MEFFDQMRIRG---LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 226

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C+   +  A     +M+++G  PDV++Y+T+++  C++G+LD A      + + GV
Sbjct: 227 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 286

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           +PD ++Y ++IQGLC    + +A +    ML+  + P+   +  +I+ Y   GDL+ A  
Sbjct: 287 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 346

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M+  G   +  T++ LI    +     +A  L  +++ +   P   TY+ LI    
Sbjct: 347 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 406

Query: 483 NL---------------GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           N+               G +H A ++++ M+ R   P    Y  +I GHC  GN+ +A  
Sbjct: 407 NIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 466

Query: 528 VFAKI 532
           ++ ++
Sbjct: 467 LYKEM 471



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 217/453 (47%), Gaps = 25/453 (5%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E    LK+M   G     ++ +   +  +I  LC  G +  A  +  +M  KG  PD 
Sbjct: 61  IDEAFGLLKSMSSKG-----MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDE 115

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N L+N  CK G+  +A  +  EM     SP+  TY A I   C+   L++A+  F  
Sbjct: 116 VTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQ 175

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G+RPN  T+  L+    ++GLL +A + L E+    +   +  V+T    +  +  
Sbjct: 176 MRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT---ESGFSPSVVTYNAFIHGHCV 232

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                +AL +  +M +K +  D+V+Y+ +I+GFC  G++  AF    +M+++G  PD +T
Sbjct: 233 LERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVT 292

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y++L+  LC+  +L EA      +   G+ PD+ +Y T+I   C+ GD+ KA      M+
Sbjct: 293 YSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMI 352

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR-DLMLSFGVSSNVFTFNALI--------- 443
            K  +P+   ++V+I+G  +      A  +   L+    V S+V T++ LI         
Sbjct: 353 HKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV-TYDTLIENCSNIEFK 411

Query: 444 --LAETRG----GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
             +A  +G    G + +A  + + M+     P    YN++I   C  G++  A  LY EM
Sbjct: 412 SVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEM 471

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           +  G  P  +T   LIK     G  +E  EV  
Sbjct: 472 IHSGFVPHTVTVITLIKALFKEGMNEEMSEVIG 504



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 90/179 (50%)

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M+   V P  + +N++I G+   G+L         M   G   NV T+N LI A  + G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           I +AF L K M   G+ P++ +YN++I   C  G +  A ++ +EM  +G TPD +TY  
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           L+ G+C  GN  +A  + A++   G++   + +  L     + +  ++A +   +  +R
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 179



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 81/207 (39%), Gaps = 55/207 (26%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L E  D  + M D G     L  D   +  +I   C+ G +  AL L  +MI KG +PD 
Sbjct: 306 LTEACDLSQEMLDMG-----LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 360

Query: 154 LTHNYLVNEL-------------------------------------------------- 163
           +T++ L+N L                                                  
Sbjct: 361 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGF 420

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           C  G + +AD V   M E    P  A YN  I G+CR   L KA +L+  M ++G  P+ 
Sbjct: 421 CMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHT 480

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVL 250
           VT   L+ AL K+G+  +  + +G+ L
Sbjct: 481 VTVITLIKALFKEGMNEEMSEVIGDTL 507


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 140/465 (30%), Positives = 242/465 (52%), Gaps = 37/465 (7%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           LK M+++G     L  +   +  VI   C   K+ TA  L R+M++ G +P+++T+N L+
Sbjct: 65  LKEMKESG-----LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLL 119

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           + LC+ G +++A  ++ EM E    P+  +Y+  + G C+  ++D AL +F   +N    
Sbjct: 120 SGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCP 179

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFL------------------------GEVLAD---- 252
           P+ V ++ L+  LCK G L +A K                          G+ L +    
Sbjct: 180 PDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV 239

Query: 253 ----DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
               +D   T +VIT + L+D   K G    A  ++  M  + I+ ++V YN LI+GFC+
Sbjct: 240 LETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCM 299

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
              + SA     +M   G LPD+ITYNTL++ LCK G+  EA+  +G +      PD I+
Sbjct: 300 TNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVIT 359

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I G C    I  AR     ML+++V+P+   ++ +++GY   G + +A  + + M+
Sbjct: 360 YSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMV 419

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           +   S +V+T+ +L+    + G + +A  + K M   G  P+V TY  LI A C  G   
Sbjct: 420 ASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPT 479

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +A +L +EM+  G+ P++ITY  LI G C  G+++EA ++  +++
Sbjct: 480 VAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLE 524



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 228/447 (51%), Gaps = 3/447 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   ++  A     KM +KGTVP+  T+N L+N  CK+  + +A  +++EM E  
Sbjct: 13  MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN  TY+  I G+CR  ++D A  LF  M  NG  PN VT+N L+  LC+ GL+ +A 
Sbjct: 73  LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E+    +     D  +   LM    K G    AL ++ D    +   D+VAY+ LI
Sbjct: 133 ELLDEM---RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 189

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C  G +  A   F +M +    PDV+T+  L++ LCK  +L EA      +      
Sbjct: 190 AGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 249

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ I+Y ++I GLC  G +  A+E    M+ + + P    +N +I G+     + +A  +
Sbjct: 250 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 309

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M + G   ++ T+N LI    + G   +A  L  +M      PDV TY+ LIG  C 
Sbjct: 310 MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK 369

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           L  I +A  L+D+ML++ + PD++T++ L++G+C  G + +AE +  ++     + D   
Sbjct: 370 LERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYT 429

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           +  L   + ++    +AR + ++   R
Sbjct: 430 YTSLVDGFCKVGRMVEARRVLKRMAKR 456



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 224/481 (46%), Gaps = 9/481 (1%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           ++ E  + L  MR+ G     L+ D   +  ++  LC  GKI  AL +          PD
Sbjct: 127 LMDEAYELLDEMRERG-----LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 181

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V+ ++ L+  LCK G L++A  +  +M E    P+  T+ A + G C+ + L +A  +  
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 241

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
           TM +    PN +T++ L+  LCK G + DA +    ++         +V+T   L+  + 
Sbjct: 242 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG---IEPNVVTYNSLIHGFC 298

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
                  AL L  +M       DI+ YN LI+G C  G    A   F  M  +   PDVI
Sbjct: 299 MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVI 358

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TY+ L+   CK  ++D A   +  + K  V PD +++ T+++G C  G +  A   L  M
Sbjct: 359 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM 418

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +     P+ + +  ++DG+ + G +  A  +   M   G   NV T+ ALI A  R G  
Sbjct: 419 VASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKP 478

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR-RGITPDIITYTE 511
             A+ L +EM+ +G+ P+V TY  LIG  C  G +  A ++ + + R      D+  Y  
Sbjct: 479 TVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRV 538

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           ++ G C  G M  A E+   I+  G    H  +  L +   + KE  KA ++ ++  L  
Sbjct: 539 MMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSR 598

Query: 572 K 572
           K
Sbjct: 599 K 599



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 201/400 (50%), Gaps = 3/400 (0%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           +V+T   +++ LCK   L +A     +M +    PN  TYN  I G+C+V+++ +A  L 
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M  +G+ PN VT++ ++H  C++  +  A K   +++   +     +++T   L+   
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMV---ENGCMPNLVTYNTLLSGL 122

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            +NG   +A  L ++M ++ +Q D  +Y+ L+ G C  G I  A   F         PDV
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           + Y+TL+  LCK G+LDEA   +  + +    PD +++  ++ GLC    + +A++ L +
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M +++  P    ++ +IDG  + G + +A  +   M+  G+  NV T+N+LI        
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           +  A  L +EM   G  PD+ TYN LI   C  G    A +L+ +M  +   PD+ITY+ 
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 362

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           LI G C    +  A  +F  +    +  D + F  L + Y
Sbjct: 363 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGY 402



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 9/177 (5%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I   C  GK   A  L  +M+  G  P+V+T+  L+   C  GDLE+A  ++  + 
Sbjct: 465 YTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLE 524

Query: 181 EMRPSPNCAT----YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
                 NC      Y   + G CR   +  AL L   +  +G  P    +  L+  LC+ 
Sbjct: 525 R---DENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQG 581

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
             LG A++ L E+      +  ++   + I      + G   +A AL +++     Q
Sbjct: 582 KELGKAMEVLEEMTLSRKSRPNAEAYEAVI--QELAREGRHEEANALADELLGNKGQ 636


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 241/463 (52%), Gaps = 16/463 (3%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D      +I  +C  GKI  A+ L  +M++ G  PDV+++N L+N LC  G+   A 
Sbjct: 159 IQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAV 218

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           HV ++M +    PN  TYN  I   C+   ++ A+   S M   GI P+ +T+N +VH L
Sbjct: 219 HVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGL 278

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C  G L +A +    +   +      DV+T  I++DS +K+     A    ++M  + I 
Sbjct: 279 CCLGQLNEATRLFKRM---EQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIP 335

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+V Y  +++G C  G ++ A   F +M ++G  PDV+ YNT+++ LCK   +++A  F
Sbjct: 336 PDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEF 395

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+ P+ ++Y TI+ G C  G + +A +    M+ ++V+P    +++++DG  +
Sbjct: 396 LSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQ 455

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G +S A  + + M   GV  N++T+NAL+        + +A  + + M+  G  PD+ +
Sbjct: 456 EGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHS 515

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN+LI   CN   +  A  L  +M  + +TP+ +TY  ++KG C  G + +A+E+F K+ 
Sbjct: 516 YNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMC 575

Query: 534 TLGLAIDHIPFRIL-------------KKRYRRMKESDKARDI 563
           + G+    + + IL              K ++ MKE     DI
Sbjct: 576 SSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDI 618



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 249/493 (50%), Gaps = 38/493 (7%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR   E D   +  +I  LC  G    A+ + +KM Q G  P+V+T+N +++ LCK   +
Sbjct: 190 VRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLV 249

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A   + EM      P+  TYN+ + G C + +L++A  LF  M  NG +P+ VT+NI+
Sbjct: 250 NDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNII 309

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           + +L K  L+ DA  FL E++   D     DV+T T ++      G   +A+ L+  M Q
Sbjct: 310 IDSLYKDRLVNDAADFLSEMV---DQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQ 366

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K  + D+VAYN +I+  C +  ++ A  +  +M+ RG  P+ +TY+T+L+  C  G+LDE
Sbjct: 367 KGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDE 426

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A+  +  +    V P+ +++  ++ GLC  G + +AR    +M EK V P  + +N +++
Sbjct: 427 ATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMN 486

Query: 410 GYGRCGDLSNAFSIRDLMLSFG-----------------------------------VSS 434
           GY     ++ A  + ++M+  G                                   ++ 
Sbjct: 487 GYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTP 546

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           N  T+N ++      G + DA  L K+M   G+ P + TY++L+   C  GH+  AL+L+
Sbjct: 547 NTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLF 606

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
             M  + + PDII YT LI+G    G ++ A+ +F+K+   G+      + ++ K   + 
Sbjct: 607 KSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKE 666

Query: 555 KESDKARDIHQKW 567
             SD+A ++ +KW
Sbjct: 667 GLSDEAYELFRKW 679



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 210/440 (47%), Gaps = 38/440 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC    +  A+ +  KM + G  PDV+T   L+N +C  G ++ A  +  EM    
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  +YN  I G C     + A+H+F  M  NG +PN VT+N ++ +LCK  L+ DA+
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            FL                                      ++M  + I  D + YN ++
Sbjct: 254 DFL--------------------------------------SEMVGRGIPPDAITYNSIV 275

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G ++ A   F +M + G  PDV+TYN +++ L K   +++A+ F   +   G+ 
Sbjct: 276 HGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIP 335

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y TI+ GLC  G + +A      M +K   P+   +N IID   +   +++A   
Sbjct: 336 PDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEF 395

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+  G+  N  T++ ++      G + +A  L KEM+   + P+  T+++L+   C 
Sbjct: 396 LSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQ 455

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A  +++ M  +G+ P+I TY  L+ G+C R  M EA +VF  +   G A D   
Sbjct: 456 EGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHS 515

Query: 544 FRILKKRYRRMKESDKARDI 563
           + IL   Y   +  DKA+ +
Sbjct: 516 YNILINGYCNSRRMDKAKAL 535



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 209/429 (48%), Gaps = 3/429 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL    +M +    P ++     +  + K+       ++  +M     +    + N  I 
Sbjct: 77  ALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILIN 136

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
             CR+N +D A+ ++  M   GI+P+ +T   L++ +C +G +  AV+   E++      
Sbjct: 137 CLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGH-- 194

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              DVI+   L++    +G+   A+ ++  M Q   + ++V YN +I+  C +  ++ A 
Sbjct: 195 -EPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            +  +M+ RG  PD ITYN++++ LC  G+L+EA+  +  + + G  PD ++Y  II  L
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
                +  A +FL  M+++ + P+   +  I+ G    G L+ A  +   M   G   +V
Sbjct: 314 YKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDV 373

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
             +N +I +  +   + DA     EM+  GI P+  TY+ ++   CNLG +  A QL+ E
Sbjct: 374 VAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKE 433

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M+ R + P+ +T++ L+ G C  G + EA  VF  +   G+  +   +  L   Y    +
Sbjct: 434 MVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCK 493

Query: 557 SDKARDIHQ 565
            ++AR + +
Sbjct: 494 MNEARKVFE 502



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 185/393 (47%), Gaps = 38/393 (9%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M+ M P P+   +  F+    ++ +    ++L + M   G+     + NIL++ LC+   
Sbjct: 84  MARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRL-- 141

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
             + V F                                  A+++W  MF+  IQ D++ 
Sbjct: 142 --NHVDF----------------------------------AVSVWGKMFKLGIQPDVIT 165

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           +  LING C  G I  A   + +M++ G  PDVI+YNTL+N LC  G  + A H +  + 
Sbjct: 166 FTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKME 225

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           + G  P+ ++Y TII  LC    +  A +FL  M+ + + P+   +N I+ G    G L+
Sbjct: 226 QNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLN 285

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   M   G   +V T+N +I +  +   + DA     EM+  GI PDV TY  ++
Sbjct: 286 EATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTIL 345

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C LG ++ A++L+ +M ++G  PD++ Y  +I   C    + +A E  +++   G+ 
Sbjct: 346 HGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIP 405

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            + + +  +   +  + + D+A  + ++ + RN
Sbjct: 406 PNAVTYSTILHGFCNLGQLDEATQLFKEMVGRN 438


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 132/418 (31%), Positives = 219/418 (52%), Gaps = 3/418 (0%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
             +I  L L  K   A+ L  +M+ KG  PD++T+  +VN LCK GD + A +++ +M + 
Sbjct: 805  TLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG 864

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
            +  P    YN  I G C+   +D AL+LF  M   GIRPN VT++ L+  LC  G   DA
Sbjct: 865  KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 924

Query: 243  VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
             + L +++   + K   DV T + L+D++ K G   +A  L+++M +++I   IV Y+ L
Sbjct: 925  SRLLSDMI---ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 981

Query: 303  INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            INGFC++  +  A   F  M+ +   PDV+TYNTL+   CK  +++E    +  +S+ G+
Sbjct: 982  INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 1041

Query: 363  APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
              + ++Y  +IQGL   GD   A+E    M+   V P    +N ++DG  + G L  A  
Sbjct: 1042 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 1101

Query: 423  IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
            + + +    +   ++T+N +I    + G + D + L   + L G+ PDV  YN +I   C
Sbjct: 1102 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 1161

Query: 483  NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
              G    A  L+ EM   G  P+   Y  LI+     G+ + + E+  ++++ G A D
Sbjct: 1162 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 1219



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 215/415 (51%), Gaps = 11/415 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI   C   ++  AL +  KM++ G  PD +T   LVN  C+   +  A  ++ +M E+ 
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   YNA I   C+   ++ A   F  +   GIRPN VT+  LV+ LC      DA 
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L +++     K T +VIT + L+D++ KNG   +A  L+ +M + +I  DIV Y+ LI
Sbjct: 349 RLLSDMIKK---KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 405

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG CL+  I  A   F  M+ +G L DV++YNTL+N  CK  ++++    +  +S+ G+ 
Sbjct: 406 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 465

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            + ++Y T+IQG    GD+ KA+EF   M    + P+   +N+++ G    G+L  A  I
Sbjct: 466 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 525

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M    +  ++ T+  +I    + G + +A+SL   + L G+ PD+ TY  ++   C 
Sbjct: 526 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 585

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            G +H    LY +M + G+  +  T ++        G++  + E+  K+ + G A
Sbjct: 586 KGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLSCGYA 632



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 220/447 (49%), Gaps = 8/447 (1%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D+ L + +D    M  + P    +  D+ R ++ I  L    K    + L +KM   G  
Sbjct: 166 DIKLNDAIDLFSDMVKSRPFPSIV--DFNRLLSAIVKL---KKYDVVISLGKKMEVLGIR 220

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
            D+ T N ++N  C    +  A  ++ +M ++   P+  T  + + G+CR N +  A+ L
Sbjct: 221 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 280

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   G +P+ V +N ++ +LCK   + DA  F  E+   +      +V+T T L++ 
Sbjct: 281 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI---ERKGIRPNVVTYTALVNG 337

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
              +     A  L +DM +K I  +++ Y+ L++ F  NG +  A   F +M++    PD
Sbjct: 338 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 397

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           ++TY++L+N LC   ++DEA+  + ++   G   D +SY T+I G C    +    +   
Sbjct: 398 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 457

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M ++ +V     +N +I G+ + GD+  A      M  FG+S +++T+N L+      G
Sbjct: 458 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 517

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +  A  + ++M    +  D+ TY  +I   C  G +  A  L+  +  +G+ PDI+TYT
Sbjct: 518 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 577

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGL 537
            ++ G C +G + E E ++ K++  GL
Sbjct: 578 TMMSGLCTKGLLHEVEALYTKMKQEGL 604



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 214/418 (51%), Gaps = 9/418 (2%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI---REMSEMRPSPNCA 189
           K+  A+ L   M++    P ++  N L++ + K   L+K D VI   ++M  +    +  
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVK---LKKYDVVISLGKKMEVLGIRNDLY 224

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           T+N  I  +C   ++  AL +   M   G  P+RVT   LV+  C++  + DAV  + ++
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +   +     D++    ++DS  K      A   + ++ +K I+ ++V Y  L+NG C +
Sbjct: 285 V---EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 341

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
              S A      M+K+   P+VITY+ LL+   K GK+ EA   +  + +  + PD ++Y
Sbjct: 342 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 401

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            ++I GLC+H  I +A +    M+ K  + +   +N +I+G+ +   + +   +   M  
Sbjct: 402 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 461

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+ SN  T+N LI    + G +  A     +M   GI PD++TYN+L+G  C+ G +  
Sbjct: 462 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 521

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           AL ++++M +R +  DI+TYT +I+G C  G ++EA  +F  +   GL  D + +  +
Sbjct: 522 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 579



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 215/437 (49%), Gaps = 3/437 (0%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            +I   C   ++  AL +  KM++ G  P+++T + L+N  C    + +A  ++ +M    
Sbjct: 736  LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795

Query: 184  PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              PN  T+N  I G    N+  +A+ L   M   G +P+ VT+ ++V+ LCK+G    A 
Sbjct: 796  YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855

Query: 244  KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
              L ++   + GK    V+    ++D   K      AL L+ +M  K I+ ++V Y+ LI
Sbjct: 856  NLLNKM---EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 912

Query: 304  NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            +  C  G  S A      M++R   PDV T++ L++   K+GKL EA   Y  + K  + 
Sbjct: 913  SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 972

Query: 364  PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            P  ++Y ++I G C+H  + +A++    M+ K   P+   +N +I G+ +   +     +
Sbjct: 973  PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 1032

Query: 424  RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
               M   G+  N  T+N LI    + G    A  + KEM+ DG+ P++ TYN L+   C 
Sbjct: 1033 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 1092

Query: 484  LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
             G +  A+ +++ + R  + P I TY  +I+G C  G +++  ++F  +   G+  D + 
Sbjct: 1093 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 1152

Query: 544  FRILKKRYRRMKESDKA 560
            +  +   + R    ++A
Sbjct: 1153 YNTMISGFCRKGSKEEA 1169



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 206/403 (51%), Gaps = 9/403 (2%)

Query: 169  LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
            L+ A  +  EM + RP P+   ++  ++   ++N+ D  + L   M N GI  N  T++I
Sbjct: 676  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735

Query: 229  LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
            L++  C++  L  A+  LG+++         +++T + L++ Y  +    +A+AL + MF
Sbjct: 736  LINCFCRRSQLPLALAVLGKMMKLG---YEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 792

Query: 289  QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
                Q + V +N LI+G  L+   S A A   +M+ +G  PD++TY  ++N LCK+G  D
Sbjct: 793  VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 852

Query: 349  EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
             A +    + +  + P  + Y TII GLC +  +  A      M  K + P    ++ +I
Sbjct: 853  LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 912

Query: 409  D---GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
                 YGR  D S   S    M+   ++ +VFTF+ALI A  + G + +A  L  EM+  
Sbjct: 913  SCLCNYGRWSDASRLLSD---MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 969

Query: 466  GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
             I P + TY+ LI   C    +  A Q+++ M+ +   PD++TY  LIKG C    ++E 
Sbjct: 970  SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 1029

Query: 526  EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             EVF ++   GL  + + + IL +   +  + D A++I ++ +
Sbjct: 1030 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 1072



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 213/431 (49%), Gaps = 5/431 (1%)

Query: 117  DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
            DYR  ++  R+     K+  A+ L  +M++    P ++  + L++ + K+   +    + 
Sbjct: 661  DYREKLS--RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLG 718

Query: 177  REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             +M  +    N  TY+  I  +CR ++L  AL +   M   G  PN VT + L++  C  
Sbjct: 719  EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 778

Query: 237  GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
              + +AV  + ++          + +T   L+   F +    +A+AL + M  K  Q D+
Sbjct: 779  KRISEAVALVDQMFVTG---YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 835

Query: 297  VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
            V Y V++NG C  GD   AF    +M +    P V+ YNT+++ LCK   +D+A + +  
Sbjct: 836  VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 895

Query: 357  LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
            +   G+ P+ ++Y ++I  LC +G    A   L  M+E+ + P+   ++ +ID + + G 
Sbjct: 896  METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 955

Query: 417  LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
            L  A  + D M+   +  ++ T+++LI        + +A  + + M+    FPDV TYN 
Sbjct: 956  LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 1015

Query: 477  LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            LI   C    +   ++++ EM +RG+  + +TY  LI+G    G+   A+E+F ++ + G
Sbjct: 1016 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 1075

Query: 537  LAIDHIPFRIL 547
            +  + + +  L
Sbjct: 1076 VPPNIMTYNTL 1086



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 170/364 (46%), Gaps = 38/364 (10%)

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +L+ A+ LFS M  +   P+ V  N L+ A+ K                        DV+
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKL--------------------KKYDVV 207

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
            S          G K + L + ND++          +N++IN FC    +S A +   +M
Sbjct: 208 ISL---------GKKMEVLGIRNDLY---------TFNIVINCFCCCFQVSLALSILGKM 249

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           LK G+ PD +T  +L+N  C++ ++ +A      + + G  PD ++Y  II  LC    +
Sbjct: 250 LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV 309

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A +F   +  K + P    +  +++G       S+A  +   M+   ++ NV T++AL
Sbjct: 310 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 369

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           + A  + G + +A  L +EM+   I PD+ TY+ LI   C    I  A Q++D M+ +G 
Sbjct: 370 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 429

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             D+++Y  LI G C    +++  ++F ++   GL  + + +  L + + +  + DKA++
Sbjct: 430 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 489

Query: 563 IHQK 566
              +
Sbjct: 490 FFSQ 493



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 38/283 (13%)

Query: 110  VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
            V+ +++     + ++I   C+  ++  A  +   M+ K   PDV+T+N L+   CK   +
Sbjct: 967  VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 1026

Query: 170  EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            E+   V REMS+     N  TYN  I G  +  + D A  +F  M ++G+ PN +T+N L
Sbjct: 1027 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 1086

Query: 230  VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
            +  LC                                      KNG   +A+ ++  + +
Sbjct: 1087 LDGLC--------------------------------------KNGKLEKAMVVFEYLQR 1108

Query: 290  KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
              ++  I  YN++I G C  G +   +  FC +  +G  PDV+ YNT+++  C++G  +E
Sbjct: 1109 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 1168

Query: 350  ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            A   +  + + G  P+   Y T+I+     GD   + E +  M
Sbjct: 1169 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 1211



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 4/234 (1%)

Query: 117  DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
            D   +  +I+  C   ++   + + R+M Q+G V + +T+N L+  L + GD + A  + 
Sbjct: 1009 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 1068

Query: 177  REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +EM      PN  TYN  + G C+  +L+KA+ +F  +  + + P   T+NI++  +CK 
Sbjct: 1069 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 1128

Query: 237  GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
            G + D       +          DV+    ++  + + G K +A AL+ +M +     + 
Sbjct: 1129 GKVEDGWDLFCNLSLKG---VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 1185

Query: 297  VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
              YN LI     +GD  ++     +M   GF  D  T   + N L   G+LD++
Sbjct: 1186 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 1238



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 55/123 (44%)

Query: 111  RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
            R  +E     +  +I  +C  GK+     L   +  KG  PDV+ +N +++  C+ G  E
Sbjct: 1108 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 1167

Query: 171  KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            +AD + +EM E    PN   YN  I    R  + + +  L   M + G   +  T  ++ 
Sbjct: 1168 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 1227

Query: 231  HAL 233
            + L
Sbjct: 1228 NML 1230


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 231/454 (50%), Gaps = 5/454 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            E D   +  +I  LC  GK+  AL +  +M +KG  PDV T+  +V+ LC+ G +++AD
Sbjct: 6   FEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEAD 65

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  +M E   S N   YNA I G C+   +++A  L   MA+ G  P+ +T+N ++  L
Sbjct: 66  ELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGL 125

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN--DMFQKN 291
           C+ G + +A +F   + +      + DV+    L+D+ +K G   +A  L+   DM  + 
Sbjct: 126 CRMGKVSEAKQFFDSMPSRG---YSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRK 182

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           +  D++ YN LI+GFC       A   F  ++ +G++PD +TYN++L  L ++  +DEA 
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 242

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
             +  +  +G AP+  +Y  ++ G C  G++ +  E    M EK   P+  + N +ID  
Sbjct: 243 EMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDML 302

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +   + +A  + + M   G   +V T+N L+    +   +  A  L   M+ +G  PD+
Sbjct: 303 CKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 362

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            +Y++++   C    +H A  L+D M+ R + PD++T+  L+ G C  G + EA+++   
Sbjct: 363 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDV 422

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           +    +  D +    L     R K +D+A  + Q
Sbjct: 423 MSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQ 456



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 240/489 (49%), Gaps = 18/489 (3%)

Query: 87  FNAL--DLILKENLDR----LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWL 140
           +NAL   L   EN++R    L+ M   G      E D   +  ++  LC  GK+  A   
Sbjct: 83  YNALINGLCKDENIERAYKLLEEMASKG-----YEPDNITYNTILSGLCRMGKVSEAKQF 137

Query: 141 RRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR--EMSEMRPSPNCATYNAFITGY 198
              M  +G  PDV+ +N L++ L K G + +A  + +  +M++ + +P+  TYN  I G+
Sbjct: 138 FDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGF 197

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           CRV + D+A+ LF  +   G  P+ VT+N ++  L +K  + +A +   +++   D    
Sbjct: 198 CRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV---DSGCA 254

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            +  T +I++  + + G+  + L L+ +M +K    D++  N +I+  C    +  A   
Sbjct: 255 PNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKV 314

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             +M K G +PDV+TYN LL+ LCK   +D+A   +  +   G APD +SY  ++ GLC 
Sbjct: 315 LEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCK 374

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
              +  AR     M+E+ +VP+   +N+++DG  + G L  A  + D+M    V  +  T
Sbjct: 375 TNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVT 434

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
              L+    R     +A  L + M+  G   DV  +N+++   C  G +  AL  +  M+
Sbjct: 435 CTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMV 494

Query: 499 RRG--ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           +     +PD++TYT L+      G + +A + F ++   G A D++ +  L    R+   
Sbjct: 495 KSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGR 554

Query: 557 SDKARDIHQ 565
             +A  + Q
Sbjct: 555 HIQADRLTQ 563



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 201/422 (47%), Gaps = 40/422 (9%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M+E    P+  TY+  I+G C+  ++ +AL +   M   G+ P+  T+ I+V  LC+ G 
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           + +A +   +++   +   +++ +    L++   K+ +  +A  L  +M  K  + D + 
Sbjct: 61  VDEADELFHKMI---ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNIT 117

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL- 357
           YN +++G C  G +S A  +F  M  RG+ PDV+ YN LL+ L K+GK+ EA   +  + 
Sbjct: 118 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD 177

Query: 358 -SKTGVAPDQISYKTIIQGLC----------IHGDIV----------------------- 383
            +   VAPD I+Y T+I G C          +  D++                       
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 237

Query: 384 --KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
             +A E    M++    P    +++++ G+ R G+++    + + M     S +V   NA
Sbjct: 238 MDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNA 297

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I    +   + DA  + +EM   G  PDV TYN+L+   C    +  A +L+  M+  G
Sbjct: 298 VIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 357

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
             PDI++Y+ ++ G C    + +A  +F ++    L  D + F IL     +  + D+A+
Sbjct: 358 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 417

Query: 562 DI 563
           D+
Sbjct: 418 DL 419



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 151/283 (53%), Gaps = 2/283 (0%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +K  + D+V Y+ +I+G C  G ++ A     +M ++G  PDV TY  +++ LC+ GK
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           +DEA   +  + + G + + ++Y  +I GLC   +I +A + L  M  K   P+   +N 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           I+ G  R G +S A    D M S G S +V  +N L+ A  + G + +A+ L K M +  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 467 --IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
             + PD+ TYN LI   C +     A++L+ +++ +G  PD +TY  ++ G   + NM E
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           AEE+F K+   G A +   + I+   + R+    +  +++++ 
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEM 283



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 177/354 (50%), Gaps = 14/354 (3%)

Query: 90  LDLILKENLDR----LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMI 145
           L L  K N+D      K M D+G   C    +   +  V+   C  G +   L L  +M 
Sbjct: 230 LGLARKSNMDEAEEMFKKMVDSG---CA--PNGATYSIVLSGHCRVGNMARCLELYEEMT 284

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           +K   PDVL  N +++ LCK   ++ A  V+ EMS++   P+  TYN  + G C+ N +D
Sbjct: 285 EKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 344

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           KA  LFSTM +NG  P+ V+++++++ LCK   + DA      ++   + K   DV+T  
Sbjct: 345 KAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMI---ERKLVPDVVTFN 401

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           ILMD   K G   +A  L + M + N+  D V    L++G C +     A   F  M+++
Sbjct: 402 ILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEK 461

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG--VAPDQISYKTIIQGLCIHGDIV 383
           G + DV+ +N +L  LC++GKL +A  F+  + K+    +PD ++Y T++  L   G + 
Sbjct: 462 GTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVD 521

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
           +A ++   M      P+   +N +++G  + G    A  +   M   G  S+ F
Sbjct: 522 QAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 132/418 (31%), Positives = 219/418 (52%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  L L  K   A+ L  +M+ KG  PD++T+  +VN LCK GD + A +++ +M + 
Sbjct: 191 TLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG 250

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +  P    YN  I G C+   +D AL+LF  M   GIRPN VT++ L+  LC  G   DA
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +++   + K   DV T + L+D++ K G   +A  L+++M +++I   IV Y+ L
Sbjct: 311 SRLLSDMI---ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           INGFC++  +  A   F  M+ +   PDV+TYNTL+   CK  +++E    +  +S+ G+
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             + ++Y  +IQGL   GD   A+E    M+   V P    +N ++DG  + G L  A  
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + +    +   ++T+N +I    + G + D + L   + L G+ PDV  YN +I   C
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             G    A  L+ EM   G  P+   Y  LI+     G+ + + E+  ++++ G A D
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 215/437 (49%), Gaps = 3/437 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C   ++  AL +  KM++ G  P+++T + L+N  C    + +A  ++ +M    
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T+N  I G    N+  +A+ L   M   G +P+ VT+ ++V+ LCK+G    A 
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++   + GK    V+    ++D   K      AL L+ +M  K I+ ++V Y+ LI
Sbjct: 242 NLLNKM---EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G  S A      M++R   PDV T++ L++   K+GKL EA   Y  + K  + 
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P  ++Y ++I G C+H  + +A++    M+ K   P+   +N +I G+ +   +     +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+  N  T+N LI    + G    A  + KEM+ DG+ P++ TYN L+   C 
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A+ +++ + R  + P I TY  +I+G C  G +++  ++F  +   G+  D + 
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538

Query: 544 FRILKKRYRRMKESDKA 560
           +  +   + R    ++A
Sbjct: 539 YNTMISGFCRKGSKEEA 555



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 206/403 (51%), Gaps = 9/403 (2%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           L+ A  +  EM + RP P+   ++  ++   ++N+ D  + L   M N GI  N  T++I
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L++  C++  L  A+  LG+++         +++T + L++ Y  +    +A+AL + MF
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLG---YEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
               Q + V +N LI+G  L+   S A A   +M+ +G  PD++TY  ++N LCK+G  D
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            A +    + +  + P  + Y TII GLC +  +  A      M  K + P    ++ +I
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 409 D---GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
                YGR  D S   S    M+   ++ +VFTF+ALI A  + G + +A  L  EM+  
Sbjct: 299 SCLCNYGRWSDASRLLSD---MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            I P + TY+ LI   C    +  A Q+++ M+ +   PD++TY  LIKG C    ++E 
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            EVF ++   GL  + + + IL +   +  + D A++I ++ +
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 213/431 (49%), Gaps = 5/431 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           DYR  ++  R+     K+  A+ L  +M++    P ++  + L++ + K+   +    + 
Sbjct: 47  DYREKLS--RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLG 104

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M  +    N  TY+  I  +CR ++L  AL +   M   G  PN VT + L++  C  
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             + +AV  + ++          + +T   L+   F +    +A+AL + M  K  Q D+
Sbjct: 165 KRISEAVALVDQMFVTG---YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y V++NG C  GD   AF    +M +    P V+ YNT+++ LCK   +D+A + +  
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G+ P+ ++Y ++I  LC +G    A   L  M+E+ + P+   ++ +ID + + G 
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L  A  + D M+   +  ++ T+++LI        + +A  + + M+    FPDV TYN 
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C    +   ++++ EM +RG+  + +TY  LI+G    G+   A+E+F ++ + G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461

Query: 537 LAIDHIPFRIL 547
           +  + + +  L
Sbjct: 462 VPPNIMTYNTL 472



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 38/283 (13%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V+ +++     + ++I   C+  ++  A  +   M+ K   PDV+T+N L+   CK   +
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E+   V REMS+     N  TYN  I G  +  + D A  +F  M ++G+ PN +T+N L
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LC                                      KNG   +A+ ++  + +
Sbjct: 473 LDGLC--------------------------------------KNGKLEKAMVVFEYLQR 494

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             ++  I  YN++I G C  G +   +  FC +  +G  PDV+ YNT+++  C++G  +E
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           A   +  + + G  P+   Y T+I+     GD   + E +  M
Sbjct: 555 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 4/228 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I+  C   ++   + + R+M Q+G V + +T+N L+  L + GD + A  + +EM   
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN  + G C+  +L+KA+ +F  +  + + P   T+NI++  +CK G + D 
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                 +          DV+    ++  + + G K +A AL+ +M +     +   YN L
Sbjct: 521 WDLFCNLSLKG---VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
           I     +GD  ++     +M   GF  D  T   + N L   G+LD++
Sbjct: 578 IRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 624



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 55/123 (44%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  +E     +  +I  +C  GK+     L   +  KG  PDV+ +N +++  C+ G  E
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +AD + +EM E    PN   YN  I    R  + + +  L   M + G   +  T  ++ 
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 613

Query: 231 HAL 233
           + L
Sbjct: 614 NML 616


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 243/482 (50%), Gaps = 38/482 (7%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC    +  A+ L+R M+ KG VPD+ T++ L+N  C      +A  ++ EM ++ 
Sbjct: 256 IIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG 315

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P   TYNA I G+ R  ++++A  +   M   GI  N +  N L++ +CK G +  A+
Sbjct: 316 LKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKAL 375

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + + E++   +     D  T ++L++ + +  +  +A  L ++M ++ +   ++ Y+V+I
Sbjct: 376 EIMQEMM---EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVII 432

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C  G++    A   +M+  G  P+ + Y TL+    K+G+++E+      + + G+ 
Sbjct: 433 NGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGIL 492

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY------------ 411
           PD   Y ++I G C    + +AR +L+ MLE+ + P  H +   IDGY            
Sbjct: 493 PDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRY 552

Query: 412 ---------------------GRC--GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
                                G C  G+++ AFS+   +LS  V  +V T++ LI   +R
Sbjct: 553 FNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSR 612

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G + +AF +  E+   G+ P+ FTYN LI  SC  G++  A QL +EM  +GI PDI+T
Sbjct: 613 NGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVT 672

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           Y  LI G C  G ++ A+ +F  I+  GL  + + +  +   Y + K    A  + ++ L
Sbjct: 673 YNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEML 732

Query: 569 LR 570
           LR
Sbjct: 733 LR 734



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 227/446 (50%), Gaps = 3/446 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I      G I  A  ++ +M+  G   +++  N L+N +CK G +EKA  +++EM E 
Sbjct: 325 ALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEK 384

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY+  I G+CR   + +A  L   M    + P  +T++++++ LC+ G L   
Sbjct: 385 GVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGT 444

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E++ +       + +  T LM ++ K G   ++  +   M ++ I  D+  YN L
Sbjct: 445 NAILREMVMNG---LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 501

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I GFC    +  A  Y  +ML+R   P+  TY   ++   K G+++ A  ++  +   GV
Sbjct: 502 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGV 561

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+   Y  +I+G C  G++ +A      +L + V+ +   ++V+I G  R G +  AF 
Sbjct: 562 LPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFG 621

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I   +   G+  N FT+N+LI    + G++  A  L +EM + GI PD+ TYN+LI   C
Sbjct: 622 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLC 681

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G I  A  L+D++  RG+TP+ +TY  ++ G+C   N   A ++  ++   G+  D  
Sbjct: 682 KAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAF 741

Query: 543 PFRILKKRYRRMKESDKARDIHQKWL 568
            + ++     + ++ +KA D+ Q+ L
Sbjct: 742 IYNVILNFCCKEEKFEKALDLFQEML 767



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 232/454 (51%), Gaps = 9/454 (1%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           +++ L+ ++ M + G     +E D + +  +I   C G  +  A  L  +M ++   P V
Sbjct: 371 MEKALEIMQEMMEKG-----VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTV 425

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           LT++ ++N LC+ G+L+  + ++REM      PN   Y   +T + +   ++++  +   
Sbjct: 426 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 485

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   GI P+   +N L+   CK   + +A  +L E+L   + +   +  T    +D Y K
Sbjct: 486 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEML---ERRLRPNAHTYGAFIDGYSK 542

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G+   A   +N+M    +  ++  Y  LI G C  G+++ AF+ F  +L R  L DV T
Sbjct: 543 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 602

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y+ L++ L + GK+ EA   +  L + G+ P+  +Y ++I G C  G++ KA + L  M 
Sbjct: 603 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 662

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            K + P+   +N++IDG  + G++  A ++ D +   G++ N  T+ A++    +  +  
Sbjct: 663 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 722

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            AF L +EMLL G+ PD F YN+++   C       AL L+ EML +G     +++  LI
Sbjct: 723 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLI 781

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +G+C  G ++EA  +  ++       +H+ +  L
Sbjct: 782 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 815



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 211/417 (50%), Gaps = 6/417 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I   C  G +  A  + R ++ +  + DV T++ L++ L + G + +A  +  E+ 
Sbjct: 568 YTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 627

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TYN+ I+G C+   +DKA  L   M   GI P+ VT+NIL+  LCK G + 
Sbjct: 628 EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIE 687

Query: 241 DAVKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            A     ++    +G+  T + +T   ++D Y K+ +   A  L  +M  + +  D   Y
Sbjct: 688 RAKNLFDDI----EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIY 743

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           NV++N  C       A   F +ML++GF    +++NTL+   CK GKL EA+H    + +
Sbjct: 744 NVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIE 802

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
               P+ ++Y ++I   C  G + +A+   L M E++V+P    +  ++ GY   G++S 
Sbjct: 803 KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE 862

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
             ++ + M++ G+  +  T+  +I A  R G++ +A  LK E+L+ G+   V  Y+ LI 
Sbjct: 863 VSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQ 922

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           A C        L+L +E+   G    + T + + +G    GNM EA EV   +   G
Sbjct: 923 ALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 979



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 216/460 (46%), Gaps = 42/460 (9%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P +L+ N L+ +L K   +E    V   M   +  P+  TY   I+ +C+V  +  A  +
Sbjct: 178 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 237

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   G  PN VT+N+++  LC+  LL +A++    ++   D     D+ T  IL++ 
Sbjct: 238 LLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMV---DKGLVPDLYTYDILING 294

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           +       +A  +  +M    ++ + + YN LI+GF   GDI  AF    +M+  G   +
Sbjct: 295 FCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEAN 354

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           +I +NTLLN +CK GK+++A      + + GV PD  +Y  +I+G C   ++ +A E L 
Sbjct: 355 LIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLD 414

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M ++ + P    ++VII+G  RCG+L    +I   M+  G+  N   +  L+ A  + G
Sbjct: 415 EMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEG 474

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC---------------------------- 482
            + ++  + + M   GI PDVF YN LI   C                            
Sbjct: 475 RVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYG 534

Query: 483 -------NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
                    G + +A + ++EML  G+ P++  YT LI+GHC  GN+ EA  VF  I + 
Sbjct: 535 AFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSR 594

Query: 536 GLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRN 571
            +  D   + +L     R  +  +A     ++ +K LL N
Sbjct: 595 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN 634



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 209/421 (49%), Gaps = 4/421 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+  G +P+V  +  L+   CK G++ +A  V R +   R   +  TY+  I G  R  
Sbjct: 555 EMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNG 614

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           ++ +A  +FS +   G+ PN  T+N L+   CK+G +  A + L E+          D++
Sbjct: 615 KMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG---INPDIV 671

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T  IL+D   K G+  +A  L++D+  + +  + V Y  +++G+C + + ++AF    +M
Sbjct: 672 TYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 731

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L RG  PD   YN +LN  CK+ K ++A   +  + + G A   +S+ T+I+G C  G +
Sbjct: 732 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKL 790

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A   L  M+EK  +P    +  +ID   + G +  A  +   M    V     T+ +L
Sbjct: 791 QEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSL 850

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +      G++ +  +L +EM+  GI PD  TY ++I A C  G++  A +L DE+L +G+
Sbjct: 851 LHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGM 910

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
              +  Y  LI+  C +    E  ++  +I   G  +      ++ + ++     D+A +
Sbjct: 911 PMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAE 970

Query: 563 I 563
           +
Sbjct: 971 V 971



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 179/347 (51%), Gaps = 5/347 (1%)

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           PN V  ++L+ +  K G L +AV      L   + +    +++   L+    K G+K + 
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVF---LGPKNFEFRPSLLSCNSLLGDLLK-GNKVEL 198

Query: 281 L-ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
              +++ M    +  D+  Y  +I+  C  G++  A     +M ++G  P+++TYN ++ 
Sbjct: 199 FWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIG 258

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LC+   LDEA      +   G+ PD  +Y  +I G C+     +A+  LL M++  + P
Sbjct: 259 GLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKP 318

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           EP  +N +IDG+ R GD+  AF I+D M++ G+ +N+  +N L+    + G +  A  + 
Sbjct: 319 EPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIM 378

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           +EM+  G+ PD  TY+LLI   C   ++  A +L DEM +R + P ++TY+ +I G C  
Sbjct: 379 QEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRC 438

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           GN++    +  ++   GL  + + +  L   + +    +++R I ++
Sbjct: 439 GNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 485



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 185/390 (47%), Gaps = 11/390 (2%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           SPN   ++  +  Y ++  L +A+++F    N   RP+ ++ N L+  L K    G+ V+
Sbjct: 142 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLK----GNKVE 197

Query: 245 FLGEVLADDDG----KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
              +V    DG    K   DV T T ++ ++ K G+   A  +  +M +K    ++V YN
Sbjct: 198 LFWKVF---DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYN 254

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           V+I G C    +  A      M+ +G +PD+ TY+ L+N  C + +  EA      +   
Sbjct: 255 VIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV 314

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+ I+Y  +I G    GDI +A      M+   +     IWN +++G  + G +  A
Sbjct: 315 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKA 374

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             I   M+  GV  +  T++ LI    RG ++  AF L  EM    + P V TY+++I  
Sbjct: 375 LEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIING 434

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  G++     +  EM+  G+ P+ + YT L+  H   G ++E+  +  +++  G+  D
Sbjct: 435 LCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPD 494

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWLLR 570
              +  L   + + K  ++AR    + L R
Sbjct: 495 VFCYNSLIIGFCKAKRMEEARTYLMEMLER 524



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 169/375 (45%), Gaps = 39/375 (10%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++I   C  G +  A  L  +M  KG  PD++T+N L++ LCK G++E+A ++  ++   
Sbjct: 640  SLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGR 699

Query: 183  RPSPNCATYNAFITGYCRV-----------------------------------NELDKA 207
              +PNC TY A + GYC+                                     + +KA
Sbjct: 700  GLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKA 759

Query: 208  LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
            L LF  M   G   + V+ N L+   CK G L +A   L E++   + +   + +T T L
Sbjct: 760  LDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMI---EKQFIPNHVTYTSL 815

Query: 268  MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
            +D   K G   +A  LW +M ++N+      Y  L++G+   G++S   A F +M+ +G 
Sbjct: 816  IDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGI 875

Query: 328  LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             PD +TY  +++  C++G + EA      +   G+     +Y  +IQ LC   +  +  +
Sbjct: 876  EPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLK 935

Query: 388  FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
             L  + E          +VI  G+   G++  A  +   M+ FG  SN  +   L+    
Sbjct: 936  LLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQ 995

Query: 448  RGGSIFDAFSLKKEM 462
             G +  D+ +L K+M
Sbjct: 996  NGANSEDSDNLLKQM 1010



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 4/290 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++   C       A  L  +M+ +G  PD   +N ++N  CK    EKA  + +EM 
Sbjct: 708 YAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML 767

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E +   +  ++N  I GYC+  +L +A HL   M      PN VT+  L+   CK G++G
Sbjct: 768 E-KGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMG 826

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +   E+    +        T T L+  Y   G+  +  AL+ +M  K I+ D + Y 
Sbjct: 827 EAKRLWLEM---QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYY 883

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           V+I+ +C  G++  A     ++L +G    V  Y+ L+  LCK+ +  E       + ++
Sbjct: 884 VMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGES 943

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
           G      +   I +G  I G++ +A E L SM++   V        ++DG
Sbjct: 944 GFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/424 (31%), Positives = 223/424 (52%), Gaps = 9/424 (2%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           + G   +  ++N ++  LC++G +++A  ++ +M     +P+  +Y+  I GYC + EL 
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           KAL L   M   G++PNR T+N ++  LCK G   +A K L E+++    K   D +  T
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ---KIIPDNVVYT 367

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            L+  +FK G    A   +++M  K I  D + Y  LI GF   G +      F +M+ R
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  PD +TY TL++  CK G++  A   +  + + G+ P+ ++Y  +I GLC HG++  A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E L  M +K +     I+N +++G  + G++  A  +   M   G+  +  T+  +I A
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             R G I  A  L +EML  G+ P V T+N+L+   C LG +    +L   ML +GI PD
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            ITY  L+K HC R +M    +++ +++  G+A D   + IL      +K   KAR++ +
Sbjct: 608 AITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNIL------IKGHCKARNLKE 661

Query: 566 KWLL 569
            W L
Sbjct: 662 AWFL 665



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 231/443 (52%), Gaps = 3/443 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  GK+  A  L  +M  + + PDV++++ +++  C +G+L+KA  ++ +M    
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYN+ I   C++ +  +A  +   M +  I P+ V +  L+H   K G +  A 
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTAN 383

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K+  E+L+    K + D IT T L+  + + G   +   L+++M  + ++ D V Y  LI
Sbjct: 384 KWFDEMLSK---KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLI 440

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           + +C  G++ +AF+   +M++ G  P+++TY  L++ LCK G+LD A+     + K G+ 
Sbjct: 441 DVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQ 500

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            +   Y +++ G+C  G+I +A + +  M    + P+   +  +ID Y R GD+  A  +
Sbjct: 501 LNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              ML  G+   V TFN L+      G + D   L   ML  GI PD  TYN L+   C 
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCI 620

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              ++   ++Y  M  +G+ PD  TY  LIKGHC   N+KEA  ++ ++   G       
Sbjct: 621 RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTS 680

Query: 544 FRILKKRYRRMKESDKARDIHQK 566
           +  L KR+ + ++  +AR++ ++
Sbjct: 681 YNALIKRFYKKRKFXEARELFEE 703



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 216/437 (49%), Gaps = 10/437 (2%)

Query: 111 RCTLETDYRR-------HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           R  ++ D+R        +  VI   C  G++  AL L   M  KG  P+  T+N ++  L
Sbjct: 279 RLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLL 338

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           CKIG   +A+ V+REM   +  P+   Y   I G+ ++  +  A   F  M +  I P+ 
Sbjct: 339 CKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDY 398

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           +T+  L+    + G + +      E+++        D +T T L+D Y K G+   A +L
Sbjct: 399 ITYTTLIQGFGQGGKVIEPQNLFHEMISRG---LKPDEVTYTTLIDVYCKAGEMVNAFSL 455

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            N+M Q  +  +IV Y  LI+G C +G++ +A     +M K+G   +V  YN+++N +CK
Sbjct: 456 HNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICK 515

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G +++A      +   G+ PD I+Y T+I   C  GDI KA + L  ML++ + P    
Sbjct: 516 AGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVT 575

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +NV+++G+   G L +   +   ML  G+  +  T+N L+       S+     + K M 
Sbjct: 576 FNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMR 635

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             G+ PD  TYN+LI   C   ++  A  LY EM+ +G  P + +Y  LIK    +    
Sbjct: 636 NQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFX 695

Query: 524 EAEEVFAKIQTLGLAID 540
           EA E+F +++  GL  D
Sbjct: 696 EARELFEEMRGHGLVAD 712



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 180/387 (46%), Gaps = 38/387 (9%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  DY  +  +I+    GGK+     L  +MI +G  PD +T+  L++  CK G++  A 
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM +M  +PN  TY A I G C+  ELD A  L   M   G++ N   +N +V+ +
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G +  A+K + E+   +      D IT T ++D+Y + GD  +A  L  +M  + +Q
Sbjct: 514 CKAGNIEQAIKLMKEM---EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQ 570

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             +V +NVL+NGFC+ G +         ML++G +PD ITYNTL+   C +  ++  +  
Sbjct: 571 PTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKI 630

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  +   GVAPD  +Y  +I+G C   ++ +A      M+EK  VP              
Sbjct: 631 YKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVP-------------- 676

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
                                 V ++NALI    +     +A  L +EM   G+  D   
Sbjct: 677 ---------------------TVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEI 715

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRR 500
           YN  +      G + + L L DE + +
Sbjct: 716 YNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 200/421 (47%), Gaps = 42/421 (9%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE-LDKALH 209
           P+ +  +     L +IG L +A  ++ ++          + NAF++     +E ++ A+ 
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           +F      GI  N  ++NI++++LC+ G + +A + L ++          D  +ST    
Sbjct: 248 VF---CEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQM----------DFRSST---- 290

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
                                    D+V+Y+ +I+G+C  G++  A      M  +G  P
Sbjct: 291 ------------------------PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKP 326

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           +  TYN+++  LCK GK  EA      +    + PD + Y T+I G    G +  A ++ 
Sbjct: 327 NRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWF 386

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             ML K + P+   +  +I G+G+ G +    ++   M+S G+  +  T+  LI    + 
Sbjct: 387 DEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKA 446

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + +AFSL  EM+  G+ P++ TY  LI   C  G +  A +L DEM ++G+  ++  Y
Sbjct: 447 GEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIY 506

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
             ++ G C  GN+++A ++  +++  G+  D I +  +   Y R+ + DKA  + Q+ L 
Sbjct: 507 NSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLD 566

Query: 570 R 570
           R
Sbjct: 567 R 567



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 136/278 (48%), Gaps = 3/278 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC  G++ TA  L  +M +KG   +V  +N +VN +CK G++E+A  +++EM   
Sbjct: 473 ALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVA 532

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY   I  YCR+ ++DKA  L   M + G++P  VT N+L++  C  G+L D 
Sbjct: 533 GIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDG 592

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + LG +L   +     D IT   LM  +           ++  M  + +  D   YN+L
Sbjct: 593 DRLLGWML---EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNIL 649

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G C   ++  A+  + +M+++G++P V +YN L+    K+ K  EA   +  +   G+
Sbjct: 650 IKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGL 709

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
             D   Y   +      GD+          +EK ++ E
Sbjct: 710 VADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLLNE 747


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/424 (31%), Positives = 223/424 (52%), Gaps = 9/424 (2%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           + G   +  ++N ++  LC++G +++A  ++ +M     +P+  +Y+  I GYC + EL 
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           KAL L   M   G++PNR T+N ++  LCK G   +A K L E+++    K   D +  T
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ---KIIPDNVVYT 367

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            L+  +FK G    A   +++M  K I  D + Y  LI GF   G +      F +M+ R
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  PD +TY TL++  CK G++  A   +  + + G+ P+ ++Y  +I GLC HG++  A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E L  M +K +     I+N +++G  + G++  A  +   M   G+  +  T+  +I A
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             R G I  A  L +EML  G+ P V T+N+L+   C LG +    +L   ML +GI PD
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            ITY  L+K HC R +M    +++ +++  G+A D   + IL      +K   KAR++ +
Sbjct: 608 AITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNIL------IKGHCKARNLKE 661

Query: 566 KWLL 569
            W L
Sbjct: 662 AWFL 665



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 231/443 (52%), Gaps = 3/443 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  GK+  A  L  +M  + + PDV++++ +++  C +G+L+KA  ++ +M    
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYN+ I   C++ +  +A  +   M +  I P+ V +  L+H   K G +  A 
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTAN 383

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K+  E+L+    K + D IT T L+  + + G   +   L+++M  + ++ D V Y  LI
Sbjct: 384 KWFDEMLSK---KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLI 440

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           + +C  G++ +AF+   +M++ G  P+++TY  L++ LCK G+LD A+     + K G+ 
Sbjct: 441 DVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQ 500

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            +   Y +++ G+C  G+I +A + +  M    + P+   +  +ID Y R GD+  A  +
Sbjct: 501 LNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              ML  G+   V TFN L+      G + D   L   ML  GI PD  TYN L+   C 
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCI 620

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              ++   ++Y  M  +G+ PD  TY  LIKGHC   N+KEA  ++ ++   G       
Sbjct: 621 RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTS 680

Query: 544 FRILKKRYRRMKESDKARDIHQK 566
           +  L KR+ + K+  +AR++ ++
Sbjct: 681 YNALIKRFYKKKKILEARELFEE 703



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 217/437 (49%), Gaps = 10/437 (2%)

Query: 111 RCTLETDYRR-------HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           R  ++ D+R        +  VI   C  G++  AL L   M  KG  P+  T+N ++  L
Sbjct: 279 RLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLL 338

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           CKIG   +A+ V+REM   +  P+   Y   I G+ ++  +  A   F  M +  I P+ 
Sbjct: 339 CKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDY 398

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           +T+  L+    + G + +      E+++        D +T T L+D Y K G+   A +L
Sbjct: 399 ITYTTLIQGFGQGGKVIEPQNLFHEMISRG---LKPDEVTYTTLIDVYCKAGEMVNAFSL 455

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            N+M Q  +  +IV Y  LI+G C +G++ +A     +M K+G   +V  YN+++N +CK
Sbjct: 456 HNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICK 515

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G +++A      +   G+ PD I+Y T+I   C  GDI KA + L  ML++ + P    
Sbjct: 516 AGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVT 575

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +NV+++G+   G L +   +   ML  G+  +  T+N L+       S+     + K M 
Sbjct: 576 FNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMR 635

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             G+ PD  TYN+LI   C   ++  A  LY EM+ +G  P + +Y  LIK    +  + 
Sbjct: 636 NQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKIL 695

Query: 524 EAEEVFAKIQTLGLAID 540
           EA E+F +++  GL  D
Sbjct: 696 EARELFEEMRGHGLVAD 712



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 181/387 (46%), Gaps = 38/387 (9%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  DY  +  +I+    GGK+     L  +MI +G  PD +T+  L++  CK G++  A 
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM +M  +PN  TY A I G C+  ELD A  L   M   G++ N   +N +V+ +
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G +  A+K + E+   +      D IT T ++D+Y + GD  +A  L  +M  + +Q
Sbjct: 514 CKAGNIEQAIKLMKEM---EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQ 570

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             +V +NVL+NGFC+ G +         ML++G +PD ITYNTL+   C +  ++  +  
Sbjct: 571 PTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKI 630

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  +   GVAPD  +Y  +I+G C   ++ +A      M+EK  VP              
Sbjct: 631 YKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVP-------------- 676

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
                                 V ++NALI    +   I +A  L +EM   G+  D   
Sbjct: 677 ---------------------TVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEI 715

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRR 500
           YN  +      G + + L L DE + +
Sbjct: 716 YNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 200/421 (47%), Gaps = 42/421 (9%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE-LDKALH 209
           P+ +  +     L +IG L +A  ++ ++          + NAF++     +E ++ A+ 
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           +F      GI  N  ++NI++++LC+ G + +A + L ++          D  +ST    
Sbjct: 248 VF---CEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQM----------DFRSST---- 290

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
                                    D+V+Y+ +I+G+C  G++  A      M  +G  P
Sbjct: 291 ------------------------PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKP 326

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           +  TYN+++  LCK GK  EA      +    + PD + Y T+I G    G +  A ++ 
Sbjct: 327 NRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWF 386

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             ML K + P+   +  +I G+G+ G +    ++   M+S G+  +  T+  LI    + 
Sbjct: 387 DEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKA 446

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + +AFSL  EM+  G+ P++ TY  LI   C  G +  A +L DEM ++G+  ++  Y
Sbjct: 447 GEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIY 506

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
             ++ G C  GN+++A ++  +++  G+  D I +  +   Y R+ + DKA  + Q+ L 
Sbjct: 507 NSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLD 566

Query: 570 R 570
           R
Sbjct: 567 R 567


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 228/447 (51%), Gaps = 3/447 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            V+   C   ++  ALWL  +M+ +G  PDV+++  ++N LCK+  +++A  V+ +M + 
Sbjct: 84  TVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQR 143

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY   + G+CRV +LD A+ L   M   G RPN +T+N ++H LC    L  A
Sbjct: 144 GCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSA 203

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++   E+  ++ G    DV T + ++DS  K+G    A  L   M  K    ++V Y+ L
Sbjct: 204 LQLFKEM--EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSL 261

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G C  G +  A A   +M + G  P+++TYNT+++  CK G++DEA H    +   G 
Sbjct: 262 LHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGC 321

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ ++Y  ++   C  G    A   +  M+EK  VP    +N ++D + +  ++  A  
Sbjct: 322 QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQ 381

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M+  G   NV ++N +I    +   + +   L ++ML +   PD+ T+N +I A C
Sbjct: 382 LLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC 441

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI-QTLGLAIDH 541
               + +A +L++ +   G TP+++TY  L+ G C      +AE +  ++ +  G + D 
Sbjct: 442 KTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDI 501

Query: 542 IPFRILKKRYRRMKESDKARDIHQKWL 568
           I +  +     + K  D+A  +  + L
Sbjct: 502 ITYNTVIDGLCKSKRVDRAYKLFLQML 528



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 243/473 (51%), Gaps = 8/473 (1%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L   L   K M ++G    +   D   +  ++  L   GK+  A  L   M+ KG  P+V
Sbjct: 200 LDSALQLFKEMEESG----SCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNV 255

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T++ L++ LCK G L++A  +++ M+    SPN  TYN  I G+C++  +D+A HL   
Sbjct: 256 VTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEE 315

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M + G +PN VT+ +L+ A CK G   DA+  + EV+ +       ++ T   L+D + K
Sbjct: 316 MVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLV-EVMVEK--GYVPNLFTYNSLLDMFCK 372

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
             +  +A  L + M QK    ++V+YN +I G C    +        QML    +PD++T
Sbjct: 373 KDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVT 432

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           +NT+++ +CK  ++D A   + ++ ++G  P+ ++Y +++ GLC      +A   L  M 
Sbjct: 433 FNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMT 492

Query: 394 EKS-VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
            K    P+   +N +IDG  +   +  A+ +   MLS G++ +  T++ +I +  +   +
Sbjct: 493 RKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFM 552

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +A ++ + ML +G  P   TY  LI   C  G++  AL++   +L +G  PD++T++  
Sbjct: 553 DEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIF 612

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           I     RG +++A E+   +   GL  D + +  L K +     ++ A D+ +
Sbjct: 613 IDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFE 665



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 234/457 (51%), Gaps = 6/457 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI  LC   ++  A  +  KMIQ+G  P+V+T+  LV+  C++GDL+ A  ++
Sbjct: 113 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELV 172

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV-THNILVHALCK 235
           R+M+E    PN  TYN  + G C   +LD AL LF  M  +G  P  V T++ +V +L K
Sbjct: 173 RKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVK 232

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G + DA + +  +++      + +V+T + L+    K G   +A AL   M +     +
Sbjct: 233 SGKVDDACRLVEAMVSK---GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPN 289

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           IV YN +I+G C  G I  A+    +M+  G  P+V+TY  LL+  CK GK ++A     
Sbjct: 290 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 349

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
           V+ + G  P+  +Y +++   C   ++ +A + L SM++K  VP    +N +I G  +  
Sbjct: 350 VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKAT 409

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            +     + + MLS     ++ TFN +I A  +   +  A+ L   +   G  P++ TYN
Sbjct: 410 KVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYN 469

Query: 476 LLIGASCNLGHIHLALQLYDEMLRR-GITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
            L+   C       A  L  EM R+ G +PDIITY  +I G C    +  A ++F ++ +
Sbjct: 470 SLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLS 529

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            GLA D + + I+     + +  D+A ++ +  +L+N
Sbjct: 530 DGLAPDDVTYSIVISSLCKWRFMDEANNVLE-LMLKN 565



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 218/428 (50%), Gaps = 5/428 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H +++R LC  G+   A+   R+M  K   PD +T+N ++N L K   L+ A  ++ EM 
Sbjct: 13  HKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMV 71

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   +PN  +YN  + G+C+ N ++ AL L   M   G  P+ V++  +++ LCK   + 
Sbjct: 72  DNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVD 131

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A + + +++         +VIT   L+D + + GD   A+ L   M ++  + + + YN
Sbjct: 132 EACRVMDKMIQR---GCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYN 188

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFL-PDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
            +++G C    + SA   F +M + G   PDV TY+T+++ L K GK+D+A      +  
Sbjct: 189 NIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVS 248

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G +P+ ++Y +++ GLC  G + +A   L  M      P    +N IIDG+ + G +  
Sbjct: 249 KGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDE 308

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A+ + + M+  G   NV T+  L+ A  + G   DA  L + M+  G  P++FTYN L+ 
Sbjct: 309 AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLD 368

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C    +  A QL   M+++G  P++++Y  +I G C    + E   +  ++ +     
Sbjct: 369 MFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVP 428

Query: 540 DHIPFRIL 547
           D + F  +
Sbjct: 429 DIVTFNTI 436



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 204/395 (51%), Gaps = 5/395 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G+I  A  L  +M+  G  P+V+T+  L++  CK G  E A  ++  M E 
Sbjct: 295 TIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 354

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN+ +  +C+ +E+++A  L S+M   G  PN V++N ++  LCK   + + 
Sbjct: 355 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEG 414

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V  L ++L+++      D++T   ++D+  K      A  L+N + +     ++V YN L
Sbjct: 415 VLLLEQMLSNN---CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 471

Query: 303 INGFCLNGDISSAFAYFCQML-KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           ++G C +     A     +M  K+G  PD+ITYNT+++ LCK  ++D A   +  +   G
Sbjct: 472 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 531

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           +APD ++Y  +I  LC    + +A   L  ML+    P    +  +IDG+ + G+L  A 
Sbjct: 532 LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKAL 591

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            I  L+LS G   +V TF+  I   ++ G +  A  L + ML  G+ PD  TYN L+   
Sbjct: 592 EILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGF 651

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
           C+      A+ L++ M + G  PD  TYT L+ GH
Sbjct: 652 CDASRTEDAVDLFEVMRQCGCEPDNATYTTLV-GH 685



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 225/459 (49%), Gaps = 9/459 (1%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           T   D   +  +I  L    ++  A+ L  +M+  G  P+V ++N +++  CK   +E A
Sbjct: 39  TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENA 98

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             ++ +M      P+  +Y   I G C+++++D+A  +   M   G +PN +T+  LV  
Sbjct: 99  LWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDG 158

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-N 291
            C+ G L  AV+ + ++    +     + IT   +M           AL L+ +M +  +
Sbjct: 159 FCRVGDLDGAVELVRKM---TERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGS 215

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
              D+  Y+ +++    +G +  A      M+ +G  P+V+TY++LL+ LCK GKLDEA+
Sbjct: 216 CPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEAT 275

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                ++++G +P+ ++Y TII G C  G I +A   L  M++    P    + V++D +
Sbjct: 276 ALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAF 335

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +CG   +A  + ++M+  G   N+FT+N+L+    +   +  A  L   M+  G  P+V
Sbjct: 336 CKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNV 395

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            +YN +I   C    +H  + L ++ML     PDI+T+  +I   C    +  A E+F  
Sbjct: 396 VSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNL 455

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           IQ  G   + + +  L     + +  D+A     ++LLR
Sbjct: 456 IQESGCTPNLVTYNSLVHGLCKSRRFDQA-----EYLLR 489



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 208/427 (48%), Gaps = 11/427 (2%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M +KG       H  ++  LC  G    A    REMS+  P P+  TYN  I G  + + 
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCP-PDSVTYNTMINGLSKSDR 59

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           LD A+ L   M +NG  PN  ++N ++H  CK   + +A+  L +++         DV++
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMR---GCPPDVVS 116

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            T +++   K     +A  + + M Q+  Q +++ Y  L++GFC  GD+  A     +M 
Sbjct: 117 YTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMT 176

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG-VAPDQISYKTIIQGLCIHGDI 382
           +RG+ P+ ITYN +++ LC   KLD A   +  + ++G   PD  +Y TI+  L   G +
Sbjct: 177 ERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKV 236

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A   + +M+ K   P    ++ ++ G  + G L  A ++   M   G S N+ T+N +
Sbjct: 237 DDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 296

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    + G I +A+ L +EM+  G  P+V TY +L+ A C  G    A+ L + M+ +G 
Sbjct: 297 IDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY 356

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            P++ TY  L+   C +  ++ A ++ + +   G   + + +  +      +    KA  
Sbjct: 357 VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTV------IAGLCKATK 410

Query: 563 IHQKWLL 569
           +H+  LL
Sbjct: 411 VHEGVLL 417



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 62/130 (47%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G +  AL + + ++ KG+ PDV+T +  ++ L K G L +A  ++  M   
Sbjct: 576 TLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRA 635

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  + G+C  +  + A+ LF  M   G  P+  T+  LV  L  K    D 
Sbjct: 636 GLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDL 695

Query: 243 VKFLGEVLAD 252
           +  + + + D
Sbjct: 696 LAEVSKSMVD 705


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/413 (33%), Positives = 215/413 (52%), Gaps = 4/413 (0%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE-MSEMRPSPNCATYNAF 194
           +A  L   M++ G  P+V T+N LV  LC  G  E+A  V+ + M     +PN  TYN  
Sbjct: 137 SARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTL 196

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           +  +CR  E+D A  L   M   G+RP+ VT N +V+ LCK G + DA K   E+  +  
Sbjct: 197 VAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREG- 255

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
              T D ++   L+  Y K G   +ALA++ +M QK +  D+V +  LI+  C  G++  
Sbjct: 256 --LTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLER 313

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A A   QM +RG   +  T+  L++  C+ G LD+A      + +  + P  + Y  +I 
Sbjct: 314 AVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLIN 373

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C  G + +ARE +  M  K + P+   ++ I+ GY + GD  +AF +   ML  GV  
Sbjct: 374 GYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVP 433

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +  T+++LI        + DA  L ++ML  G+ PD FTY  LI   C  G++  AL L+
Sbjct: 434 DAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLH 493

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           DEM+++G+ PD++TY+ LI G       KEA+ +  K+       D+I +  L
Sbjct: 494 DEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEAL 546



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 222/461 (48%), Gaps = 19/461 (4%)

Query: 124 VIRDLCLGGKIGTALWL-RRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++R LC  G+   AL +    M   G  P+V+T+N LV   C+ G+++ A+ ++  M E 
Sbjct: 160 LVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREG 219

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  T+N  + G C+   ++ A  +F  MA  G+ P+ V++N LV   CK G L +A
Sbjct: 220 GVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEA 279

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E+          DV+T T L+ +  + G+  +A+AL   M ++ ++ +   +  L
Sbjct: 280 LAVFAEMAQKG---VVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTAL 336

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC NG +  A     +M +    P V+ YN L+N  CK G++DEA      +   G+
Sbjct: 337 IDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGM 396

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y TI+ G C  GD   A E    ML+K VVP+   ++ +I G      L +A  
Sbjct: 397 KPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACE 456

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + ML  G+  + FT+  LI    + G++  A SL  EM+  G+ PDV TY++LI    
Sbjct: 457 LFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLS 516

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITY---------------TELIKGHCARGNMKEAEE 527
                  A +L  ++      PD I Y                 L+KG   +G M +A++
Sbjct: 517 KSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADK 576

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           V+  +      +D   + +L   + R     KA   H++ L
Sbjct: 577 VYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLL 617



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 221/459 (48%), Gaps = 53/459 (11%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C  G++  A  L   M + G  P ++T N +VN LCK G +E A  +  EM+   
Sbjct: 196 LVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREG 255

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  +YN  ++GYC+   L +AL +F+ MA  G+ P+ VT   L+HA+C+ G L  AV
Sbjct: 256 LTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAV 315

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             +G++   + G   ++  T T L+D + +NG    AL    +M +  IQ  +V YNVLI
Sbjct: 316 ALVGQM--RERGLRMNE-FTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLI 372

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG+C  G +  A     +M  +G  PDV+TY+T+L+  CK G  D A      + K GV 
Sbjct: 373 NGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVV 432

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD I+Y ++I+GLC    +  A E    ML+  + P+   +  +IDG+ + G++  A S+
Sbjct: 433 PDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSL 492

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGG--------------------------------- 450
            D M+  GV  +V T++ LI   ++                                   
Sbjct: 493 HDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRT 552

Query: 451 -------SIFDAFSLKKEM-LLDGIFPDVF---------TYNLLIGASCNLGHIHLALQL 493
                  ++   FS+K  M   D ++  +           Y++LI   C  G+I  AL  
Sbjct: 553 AEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSF 612

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           + ++LR G +P+  +   L++G    G   EA+ V  ++
Sbjct: 613 HKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 198/385 (51%), Gaps = 5/385 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           +P+   YNA +      + L  A  L ++M  +G+ PN  T+NILV ALC +G   +A+ 
Sbjct: 117 APSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALG 175

Query: 245 FLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            +G+   D  G   + +V+T   L+ ++ + G+   A  L   M +  ++  +V +N ++
Sbjct: 176 VVGD---DMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVV 232

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C  G +  A   F +M + G  PD ++YNTL++  CK G L EA   +  +++ GV 
Sbjct: 233 NGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVV 292

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +++ ++I  +C  G++ +A   +  M E+ +      +  +IDG+ R G L +A   
Sbjct: 293 PDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLA 352

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M    +  +V  +N LI    + G + +A  L  EM   G+ PDV TY+ ++   C 
Sbjct: 353 MKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCK 412

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           +G    A +L  +ML++G+ PD ITY+ LI+G C    + +A E+F K+  LGL  D   
Sbjct: 413 IGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFT 472

Query: 544 FRILKKRYRRMKESDKARDIHQKWL 568
           +  L   + +     KA  +H + +
Sbjct: 473 YTTLIDGHCKEGNVQKALSLHDEMI 497



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 183/419 (43%), Gaps = 53/419 (12%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
            R  L  D   +  ++   C  G +  AL +  +M QKG VPDV+T   L++ +C+ G+L
Sbjct: 252 AREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNL 311

Query: 170 EKADHVI-----------------------------------REMSEMRPSPNCATYNAF 194
           E+A  ++                                   +EM E R  P+   YN  
Sbjct: 312 ERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVL 371

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           I GYC++  +D+A  L   M   G++P+ VT++ ++   CK G    A +   ++L    
Sbjct: 372 INGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKG- 430

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
                D IT + L+    +      A  L+  M Q  +Q D   Y  LI+G C  G++  
Sbjct: 431 --VVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQK 488

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK---- 370
           A +   +M+K+G LPDV+TY+ L++ L K  +  EA      L      PD I Y+    
Sbjct: 489 ALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMH 548

Query: 371 -----------TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
                       +++G  + G + +A +   SML++    +  +++V+I G+ R G++  
Sbjct: 549 CCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMK 608

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           A S    +L  G S N  +  +L+      G   +A ++ +E+L      D  T   LI
Sbjct: 609 ALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALI 667



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 154/331 (46%), Gaps = 23/331 (6%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L + L  +K MR+     C ++     +  +I   C  G++  A  L  +M  KG  PDV
Sbjct: 346 LDDALLAMKEMRE-----CRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDV 400

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T++ +++  CKIGD + A  + R+M +    P+  TY++ I G C    L  A  LF  
Sbjct: 401 VTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEK 460

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G++P+  T+  L+   CK+G +  A+    E++         DV+T ++L+D   K
Sbjct: 461 MLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKG---VLPDVVTYSVLIDGLSK 517

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLIN---------------GFCLNGDISSAFAY 318
           +    +A  L   ++ ++   D + Y  L++               GF + G ++ A   
Sbjct: 518 SARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKV 577

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           +  ML R +  D   Y+ L++  C+ G + +A  F+  L + G +P+  S  ++++GL  
Sbjct: 578 YQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFE 637

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
            G  V+A   +  +L    + +      +ID
Sbjct: 638 EGMTVEADNVIQELLNCCSLADAETSKALID 668


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 217/428 (50%), Gaps = 8/428 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC    +G  + L  +++++G  PDV+T+N L++ LCK GDLE+A  +  +MS   
Sbjct: 43  IINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRG 102

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNG--IRPNRVTHNILVHALCKKGLLGD 241
             PN  TY+  I G C+V  +D+A  L   M      + PN +T+N  +  LCK+ +  +
Sbjct: 103 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 162

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A + +   L D   + + D +T + L+D   K G   +A ++++DM       +++ YN 
Sbjct: 163 ACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNA 221

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L+NG C    +  A A    M+ +G  PDVITY+ L++  CK  ++DEA      ++  G
Sbjct: 222 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 281

Query: 362 -----VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
                + PD++++  +I G C  G+  +A      M+ K++ P+   +  +IDG  + G 
Sbjct: 282 CTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 341

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A  I DLM + GV  NV T+NAL+    + G I +A    +EM+  G  PD  TY  
Sbjct: 342 VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGS 401

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L+ A C       ALQL  E+   G  PD +TY  L+ G    G  ++A  V  ++   G
Sbjct: 402 LVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKG 461

Query: 537 LAIDHIPF 544
              D   F
Sbjct: 462 HQPDSFTF 469



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 214/422 (50%), Gaps = 21/422 (4%)

Query: 153 VLTHNYLVNELCKIGDLEKADHVIR-EMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           V  +N ++  LC+ GD  +A  + R EM+    +P   TYN  I G C+ N+L   + LF
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             +   G  P+ VT+N L+ +LCK G L +A +  G++ +        +V+T ++L++  
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR---GCVPNVVTYSVLINGL 117

Query: 272 FKNGDKFQALALWNDMFQK--NIQTDIVAYNVLINGFCLNGDISSAFAYFCQM---LKRG 326
            K G   +A  L  +M +K  ++  +I+ YN  ++G C      S  A  C++   L+ G
Sbjct: 118 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQ----SMTAEACELMRSLRDG 173

Query: 327 FL---PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            L   PD +T++TL++ LCK G++DEA   +  +   G  P+ I+Y  ++ GLC    + 
Sbjct: 174 SLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKME 233

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF-----T 438
           +A   + SM++K V P+   ++V++D + +   +  A  +   M S G + NV      T
Sbjct: 234 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVT 293

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           FN LI    + G+   A +L +EM+   + PDV T+  LI   C  G +  A  + D M 
Sbjct: 294 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 353

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             G+ P+++TY  L+ G C  G ++EA +   ++ + G   D I +  L     R   +D
Sbjct: 354 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 413

Query: 559 KA 560
            A
Sbjct: 414 DA 415



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 217/461 (47%), Gaps = 47/461 (10%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  LC  G +  A  L   M  +G VP+V+T++ L+N LCK+G +++A  +I
Sbjct: 71  DVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELI 130

Query: 177 REMS---------------------------------------EMRPSPNCATYNAFITG 197
           +EM+                                        +R SP+  T++  I G
Sbjct: 131 QEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDG 190

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
            C+  ++D+A  +F  M   G  PN +T+N LV+ LCK   +  A   +  ++   D   
Sbjct: 191 LCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV---DKGV 247

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKN-----IQTDIVAYNVLINGFCLNGDI 312
           T DVIT ++L+D++ K     +AL L + M  +      +  D V +N+LI G C  G+ 
Sbjct: 248 TPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNF 307

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A A F +M+ +   PDV+T+  L++ LCK G+++ A     ++   GV P+ ++Y  +
Sbjct: 308 EQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNAL 367

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           + GLC  G I +A +FL  M+    VP+   +  ++    R     +A  +   + SFG 
Sbjct: 368 VHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGW 427

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +  T+N L+    + G    A ++ +EM+  G  PD FT+          G++   ++
Sbjct: 428 DPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTME 487

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           L   +L +G+ PD  T + ++   C  G + + + +  + +
Sbjct: 488 LLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 170/343 (49%), Gaps = 45/343 (13%)

Query: 266 ILMDSYFKNGDKFQALALW-NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           I++ S  + GD  +AL ++  +M +  +   IV YN +ING C + D+ +    F ++++
Sbjct: 6   IVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVE 65

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           RG  PDV+TYNTL++ LCK G L+EA   +G +S  G  P+ ++Y  +I GLC  G I +
Sbjct: 66  RGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDE 125

Query: 385 AREFLLSMLEKS---------------------------------------VVPEPHIWN 405
           ARE +  M  KS                                       V P+   ++
Sbjct: 126 ARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFS 185

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            +IDG  +CG +  A S+ D M++ G   NV T+NAL+    +   +  A ++ + M+  
Sbjct: 186 TLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDK 245

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI-----ITYTELIKGHCARG 520
           G+ PDV TY++L+ A C    +  AL+L   M  RG TP++     +T+  LI G C  G
Sbjct: 246 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAG 305

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           N ++A  +F ++    L  D + F  L     +  + + ARDI
Sbjct: 306 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 348



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 3/256 (1%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E L+ L  M   G     L  D      +I   C  G    A  L  +M+ K   PDV
Sbjct: 267 VDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 326

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T   L++ LCK G +E A  ++  M  +   PN  TYNA + G C+   +++A      
Sbjct: 327 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE 386

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M ++G  P+ +T+  LV+ALC+     DA++ + E+          D +T  IL+D  +K
Sbjct: 387 MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL---KSFGWDPDTVTYNILVDGLWK 443

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           +G   QA+ +  +M  K  Q D   +    +G   +G+++        +L +G LPD  T
Sbjct: 444 SGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATT 503

Query: 334 YNTLLNCLCKQGKLDE 349
            +++L+ +C+ GKLD+
Sbjct: 504 CSSILDWVCRSGKLDD 519



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 5/155 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E    L+ M  +G V      D   + +++  LC   +   AL L  ++   G  PD 
Sbjct: 377 IEEACQFLEEMVSSGCV-----PDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDT 431

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N LV+ L K G  E+A  V+ EM      P+  T+ A  +G  R   L   + L   
Sbjct: 432 VTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRV 491

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
           +   G+ P+  T + ++  +C+ G L D    + E
Sbjct: 492 VLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 137/435 (31%), Positives = 220/435 (50%), Gaps = 4/435 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A+ L   M ++  VP+V  +N L+  LCK   +  A+ +  EMS     PN  T+
Sbjct: 80  GDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTF 139

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYC+  E+D A+ L   M    + P+ +T N L+  LCK   + +A   L E+  
Sbjct: 140 NTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKC 199

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKF-QALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
           +       D  T +I+ D   K+ D    AL L+ +   K ++ D    ++L+NG C  G
Sbjct: 200 NG---FVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEG 256

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A      +++ G +P  + YNT++N  C+ G +D A      +   G+ P+ I++ 
Sbjct: 257 KVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFN 316

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           ++I   C    I KA E++  M+ K + P    +N++IDGYGR    S  F I + M   
Sbjct: 317 SVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEEN 376

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G   NV ++ +LI    + G I +A  + ++M+  G+ P+   YN+LI  SC +G +  A
Sbjct: 377 GEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREA 436

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L+ +DEM + GI   I+TY  LIKG C  G +KEAEE+F  I + G   D I +  L   
Sbjct: 437 LRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISG 496

Query: 551 YRRMKESDKARDIHQ 565
           Y     S K  ++++
Sbjct: 497 YSNAGNSQKCLELYE 511



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 216/434 (49%), Gaps = 4/434 (0%)

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
           G AL L R+ I KG   D  T + L+N LCK G +EKA+ V++ + E    P    YN  
Sbjct: 224 GAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTI 283

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           + GYC++ ++D+A+     M + G+RPN +  N ++   C+  ++  A +++ +++    
Sbjct: 284 VNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGK-- 341

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           G A S V T  IL+D Y +     +   +  +M +   + ++++Y  LIN  C +G I  
Sbjct: 342 GIAPS-VETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILE 400

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A      M+ RG LP+   YN L++  C  GKL EA  F+  +SK G+    ++Y ++I+
Sbjct: 401 AEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIK 460

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           GLC  G + +A E    +      P+   +N +I GY   G+      + + M   G+  
Sbjct: 461 GLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKP 520

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
            + TF+ LI   ++ G      +L  EML   + PD   YN +I      GH+  A  L 
Sbjct: 521 TINTFHPLISGCSKEGIKLKE-TLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQ 579

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
            EM+  G+ PD  TY  LI GH   G + E +++   ++  GL  +   + +L + +  +
Sbjct: 580 KEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDL 639

Query: 555 KESDKARDIHQKWL 568
           K+ + A   +++ L
Sbjct: 640 KDFNGAYVWYREML 653



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 218/448 (48%), Gaps = 37/448 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  GK+  A  + + +++ G VP  + +N +VN  C+IGD+++A   I +M    
Sbjct: 248 LLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRG 307

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PNC  +N+ I  +C +  +DKA      M   GI P+  T+NIL+    +  +     
Sbjct: 308 LRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCF 367

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E+   ++     +VI+   L++   K+G   +A  +  DM  + +  +   YN+LI
Sbjct: 368 QILEEM---EENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLI 424

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G +  A  +F +M K G    ++TYN+L+  LCK GKL EA   + +++ TG  
Sbjct: 425 DGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHC 484

Query: 364 PDQISYKTIIQGLCIHGDI---------------------------------VKAREFLL 390
           PD I+Y ++I G    G+                                  +K +E L 
Sbjct: 485 PDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLF 544

Query: 391 S-MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
           + ML+ ++ P+  ++N +I  Y   G +  AFS++  M+  GV  +  T+N+LIL   + 
Sbjct: 545 NEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKE 604

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + +   L  +M   G+ P+  TY+LLI   C+L   + A   Y EML  G  P++   
Sbjct: 605 GKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCIC 664

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGL 537
            EL  G    G ++EA+ + +++   G+
Sbjct: 665 NELSTGLRKDGRLQEAQSICSEMIANGM 692



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 157/370 (42%), Gaps = 39/370 (10%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+       +       + D  L LF  M   G RP+++ +                   
Sbjct: 29  PSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVY------------------- 69

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
                    G+A          M +  K GD   A+ L+  M ++ +  ++  YNVLI G
Sbjct: 70  ---------GRA----------MLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGG 110

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C    I  A   F +M  R  +P+ +T+NTL++  CK G++D A      + K  V P 
Sbjct: 111 LCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPS 170

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN-AFSIR 424
            I++ +++ GLC    I +AR  L  +     VP+   +++I DG  +  D +  A  + 
Sbjct: 171 IITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLY 230

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
              +  GV  + +T + L+    + G +  A  + K ++  G+ P    YN ++   C +
Sbjct: 231 REAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQI 290

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G +  A+   ++M  RG+ P+ I +  +I   C    + +AEE   K+   G+A     +
Sbjct: 291 GDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETY 350

Query: 545 RILKKRYRRM 554
            IL   Y R+
Sbjct: 351 NILIDGYGRL 360



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 129/283 (45%), Gaps = 1/283 (0%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           Q   L++ M Q+          +++     +    +    F +M+  GF PD + Y   +
Sbjct: 14  QVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAM 73

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
               K G L  A   +  + +  V P+   Y  +I GLC    I  A +    M  +++V
Sbjct: 74  LAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV 133

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P    +N +IDGY + G++  A  +R+ M    V  ++ TFN+L+    +   I +A  +
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193

Query: 459 KKEMLLDGIFPDVFTYNLLI-GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
             E+  +G  PD FTY+++  G   +      AL LY E + +G+  D  T + L+ G C
Sbjct: 194 LNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLC 253

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
             G +++AEEV   +   GL    + +  +   Y ++ + D+A
Sbjct: 254 KEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRA 296



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 146/312 (46%), Gaps = 12/312 (3%)

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           +I  +++    F N      L L+ +M     + D + Y   +      GD+  A   F 
Sbjct: 36  MIVESLVESKKFDN-----VLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFE 90

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            M +R  +P+V  YN L+  LCK+ ++ +A   +G +S   + P+++++ T+I G C  G
Sbjct: 91  TMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAG 150

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT-- 438
           ++  A      M ++ V P    +N ++ G  +   +  A  + + +   G   + FT  
Sbjct: 151 EVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYS 210

Query: 439 --FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
             F+ L+ ++   G+  D +   +E +  G+  D +T ++L+   C  G +  A ++   
Sbjct: 211 IIFDGLLKSDDGAGAALDLY---REAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKS 267

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           ++  G+ P  + Y  ++ G+C  G+M  A     ++++ GL  + I F  +  ++  M+ 
Sbjct: 268 LVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQM 327

Query: 557 SDKARDIHQKWL 568
            DKA +  +K +
Sbjct: 328 IDKAEEWVKKMV 339



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 3/148 (2%)

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
           +H  + +  +F   M ++  +P      +I++         N   +   M+  G   +  
Sbjct: 11  MHSQVSELYDF---MRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKL 67

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            +   +LA  + G +  A  L + M    + P+VF YN+LIG  C    I  A +L+ EM
Sbjct: 68  VYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEM 127

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEA 525
             R + P+ +T+  LI G+C  G +  A
Sbjct: 128 SVRNLVPNRVTFNTLIDGYCKAGEVDVA 155


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 140/435 (32%), Positives = 223/435 (51%), Gaps = 4/435 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +   I +LC   +   A  L +KM ++   P+ +T+N L+N   K G +  A 
Sbjct: 299 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 358

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V  EMS+   SPNC TYNA I G+C V + ++AL L   M   G+R N VT+  L++ L
Sbjct: 359 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGL 418

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK      A + L  +  +D        I  T+L+D   KNG   +A+ L  +M++  + 
Sbjct: 419 CKHEKFELAKRLLERMRVND---MVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 475

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D++ Y+ LINGFC  G+I SA    C+M + G + + I Y+TL+   C+ G + EA   
Sbjct: 476 PDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 535

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y V++  G   D  +   ++  LC  G + +A +FL  M    +VP    ++ II+GYG 
Sbjct: 536 YAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGS 595

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            GD  NAFS  D M+  G   + FT+ +L+    +GG++ +A      +       D   
Sbjct: 596 IGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVM 655

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN L+  +C  G++H A+ L+D+M++  + PD  TY+ L+ G C +G    A  +F    
Sbjct: 656 YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAM 715

Query: 534 TLG-LAIDHIPFRIL 547
             G L  +H+ +  L
Sbjct: 716 GRGTLFPNHVMYTCL 730



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 218/449 (48%), Gaps = 9/449 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC+ G +  A  L ++M + G VP ++T+N L+N  CK G  + A  +I  M    
Sbjct: 239 LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 298

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TYN FI   C  +   KA  L   M    I PN VT+N L++   K+G +G A 
Sbjct: 299 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 358

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+   D    + + +T   L+  +   GD  +AL L + M    ++ + V Y  L+
Sbjct: 359 QVFNEMSKFD---LSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLL 415

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C +     A     +M     +   I Y  L++ LCK G LDEA    G + K GV 
Sbjct: 416 NGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 475

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD I+Y ++I G C  G+I  A+E +  M    +V    I++ +I  + + G+++ A  +
Sbjct: 476 PDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 535

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
             +M   G  ++ FT N L+ +  R G + +A      M   G+ P+  TY+ +I    +
Sbjct: 536 YAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGS 595

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           +G    A   +D+M++ G  P   TY  L+KG C  GN+ EA++   ++  +  A+D + 
Sbjct: 596 IGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVM 655

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLRNK 572
           +  L      + E+ K+ ++H+   L +K
Sbjct: 656 YNTL------LAETCKSGNLHEAVALFDK 678



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 206/444 (46%), Gaps = 4/444 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  G +  A+ L   M + G  PDV+T++ L+N  C++G+++ A  +I  M 
Sbjct: 446 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMY 505

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                 N   Y+  I  +C+   + +A+ +++ M  NG   +  T N+LV +LC+ G LG
Sbjct: 506 RSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLG 565

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A KFL  +          + IT   +++ Y   GD   A + ++DM +         Y 
Sbjct: 566 EAEKFLCHM---SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYG 622

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L+ G C  G++  A  +  ++       D + YNTLL   CK G L EA   +  + + 
Sbjct: 623 SLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQN 682

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAR-EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            V PD  +Y +++ GLC  G  V A   F  +M   ++ P   ++  ++DG  + G    
Sbjct: 683 NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKA 742

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AF   + M+  G   +   FNA+I + +R G +  A      M   G+ P++ TYN+L+ 
Sbjct: 743 AFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLH 802

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                  +   L LY  M+R GI PD +T+  LI G    G      ++  K+   G   
Sbjct: 803 GFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLA 862

Query: 540 DHIPFRILKKRYRRMKESDKARDI 563
           D   F IL  +Y    +  KA D+
Sbjct: 863 DQFTFNILINKYSESGKMRKAFDL 886



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 182/397 (45%), Gaps = 3/397 (0%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P V T N ++  + K    E    + REMS+    PN  T+N  I G C    L KA
Sbjct: 193 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 252

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
            +L   M  NG  P  VT+N L++  CKKG    A++ +  ++        +DV T  + 
Sbjct: 253 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG---IEADVCTYNVF 309

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D+   N    +A  L   M ++ I  + V YN LINGF   G I  A   F +M K   
Sbjct: 310 IDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDL 369

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+ +TYN L+   C  G  +EA      +   G+  ++++Y T++ GLC H     A+ 
Sbjct: 370 SPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKR 429

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L  M    +V     + V+IDG  + G L  A  +   M   GV+ +V T+++LI    
Sbjct: 430 LLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC 489

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           R G+I  A  +   M   G+  +   Y+ LI   C  G++  A+++Y  M   G   D  
Sbjct: 490 RVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHF 549

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           T   L+   C  G + EAE+    +  +GL  + I +
Sbjct: 550 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITY 586



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 182/427 (42%), Gaps = 38/427 (8%)

Query: 111  RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
            R TL  ++  +  ++  L   G    A +   +M++KGT PD +  N +++   + G + 
Sbjct: 717  RGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMM 776

Query: 171  KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            KA+     M      PN ATYN  + G+ +   L + L L+STM   GI P+++T + L+
Sbjct: 777  KANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLI 836

Query: 231  HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
              L K G+    VK LG+                                      M  +
Sbjct: 837  LGLSKSGIPDLGVKLLGK--------------------------------------MIME 858

Query: 291  NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
                D   +N+LIN +  +G +  AF     M   G  PD  TYN + N L K+    E+
Sbjct: 859  GTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRES 918

Query: 351  SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            +     + + GV P    Y T+I G+C  GDI  A +    M            + ++ G
Sbjct: 919  TVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRG 978

Query: 411  YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
               CG   +A  + D ML   +   + TF  L+    R   I +A  LK  M L G+  D
Sbjct: 979  LLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLD 1038

Query: 471  VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
            V  YN+LI   C  G    A +LY+EM  R + P+I TY  L+    A  N+ + E++  
Sbjct: 1039 VVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLT 1098

Query: 531  KIQTLGL 537
             +Q  GL
Sbjct: 1099 DLQERGL 1105



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 191/439 (43%), Gaps = 37/439 (8%)

Query: 144  MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
            MI+ G  P   T+  L+  LCK G+L +A   +  +  +  + +   YN  +   C+   
Sbjct: 609  MIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGN 668

Query: 204  LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            L +A+ LF  M  N + P+  T++ L+  LC+KG    AV   G  +    G    + + 
Sbjct: 669  LHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGR--GTLFPNHVM 726

Query: 264  STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             T L+D   K G    A   + +M +K    D VA+N +I+     G +  A  +F  M 
Sbjct: 727  YTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR 786

Query: 324  KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
              G  P++ TYN LL+   K+  L      Y  + + G+ PD++++ ++I GL   G   
Sbjct: 787  WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 846

Query: 384  KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
               + L  M+ +  + +   +N++I+ Y   G +  AF + + M + GV  +  T+N + 
Sbjct: 847  LGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIF 906

Query: 444  LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE------- 496
                +  +  ++  +  EML +G+ P    Y  LI   C +G I  A +L DE       
Sbjct: 907  NGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG 966

Query: 497  ----------------------------MLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
                                        MLR  + P I T+T L+   C    + EA ++
Sbjct: 967  SHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1026

Query: 529  FAKIQTLGLAIDHIPFRIL 547
               ++  GL +D + + +L
Sbjct: 1027 KGVMELCGLKLDVVAYNVL 1045



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 191/414 (46%), Gaps = 8/414 (1%)

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
           ++P V   + L+    K G ++ A      +  +   P+  T N  +    +    +   
Sbjct: 161 SIPSVF--DLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVW 218

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
            LF  M++ GI PN  T NIL++ LC +G L  A   L ++   ++      ++T   L+
Sbjct: 219 SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQM---EENGFVPTIVTYNTLL 275

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           + Y K G    A+ L + M  K I+ D+  YNV I+  C N   + A+    +M K    
Sbjct: 276 NWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMIS 335

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+ +TYNTL+N   K+GK+  A+  +  +SK  ++P+ ++Y  +I G C  GD  +A   
Sbjct: 336 PNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRL 395

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  M    +      +  +++G  +      A  + + M    +      +  LI    +
Sbjct: 396 LDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCK 455

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G + +A  L   M  DG+ PDV TY+ LI   C +G+I  A ++   M R G+  + I 
Sbjct: 456 NGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKII 515

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKESDK 559
           Y+ LI   C  GN+ EA +V+A +   G   DH    +L     R  ++ E++K
Sbjct: 516 YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEK 569



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 113/256 (44%), Gaps = 3/256 (1%)

Query: 143  KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
            KMI +GT+ D  T N L+N+  + G + KA  ++  M+ +   P+  TYN    G  + +
Sbjct: 854  KMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKS 913

Query: 203  ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
               ++  +   M  NG+ P    +  L++ +C+ G +  A K   E+ A   G   S  +
Sbjct: 914  AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG---SHEV 970

Query: 263  TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
              + ++      G    A+ + + M +  +   I  +  L++ FC +  I+ A      M
Sbjct: 971  AESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVM 1030

Query: 323  LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
               G   DV+ YN L+  +C  G    A   Y  +    + P+  +Y  ++  +    ++
Sbjct: 1031 ELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNL 1090

Query: 383  VKAREFLLSMLEKSVV 398
            ++  + L  + E+ ++
Sbjct: 1091 IQGEKLLTDLQERGLI 1106



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 4/182 (2%)

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE--PHIWNVIIDGYGRCGDLSNAFSIRD 425
           S K+I++ LC  G  + ++    ++++   +    P +++++I  Y + G +  A    +
Sbjct: 130 SAKSILRHLCQMG--IGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFE 187

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
           L+   G   +V+T N ++ +  +       +SL +EM   GI P+V T+N+LI   C  G
Sbjct: 188 LVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEG 247

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           ++  A  L  +M   G  P I+TY  L+  +C +G  K A E+   +   G+  D   + 
Sbjct: 248 NLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYN 307

Query: 546 IL 547
           + 
Sbjct: 308 VF 309



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 23/175 (13%)

Query: 382 IVKAREF-----LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           +VKAR +     +L  L +  +    I+  ++D Y  C  + + F +             
Sbjct: 122 LVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDL------------- 168

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
                LI    + G I  A    + + L G  P V+T N+++ +        L   L+ E
Sbjct: 169 -----LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 223

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           M  +GI P++ T+  LI G C  GN+K+A  +  +++  G     + +  L   Y
Sbjct: 224 MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 278


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 140/435 (32%), Positives = 223/435 (51%), Gaps = 4/435 (0%)

Query: 114  LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            +E D   +   I +LC   +   A  L +KM ++   P+ +T+N L+N   K G +  A 
Sbjct: 1050 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 1109

Query: 174  HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             V  EMS+   SPNC TYNA I G+C V + ++AL L   M   G+R N VT+  L++ L
Sbjct: 1110 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGL 1169

Query: 234  CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            CK      A + L  +  +D        I  T+L+D   KNG   +A+ L  +M++  + 
Sbjct: 1170 CKHEKFELAKRLLERMRVND---MVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 1226

Query: 294  TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             D++ Y+ LINGFC  G+I SA    C+M + G + + I Y+TL+   C+ G + EA   
Sbjct: 1227 PDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 1286

Query: 354  YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
            Y V++  G   D  +   ++  LC  G + +A +FL  M    +VP    ++ II+GYG 
Sbjct: 1287 YAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGS 1346

Query: 414  CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             GD  NAFS  D M+  G   + FT+ +L+    +GG++ +A      +       D   
Sbjct: 1347 IGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVM 1406

Query: 474  YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            YN L+  +C  G++H A+ L+D+M++  + PD  TY+ L+ G C +G    A  +F    
Sbjct: 1407 YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAM 1466

Query: 534  TLG-LAIDHIPFRIL 547
              G L  +H+ +  L
Sbjct: 1467 GRGTLFPNHVMYTCL 1481



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 218/449 (48%), Gaps = 9/449 (2%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            +I  LC+ G +  A  L ++M + G VP ++T+N L+N  CK G  + A  +I  M    
Sbjct: 990  LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 1049

Query: 184  PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
               +  TYN FI   C  +   KA  L   M    I PN VT+N L++   K+G +G A 
Sbjct: 1050 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 1109

Query: 244  KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            +   E+   D    + + +T   L+  +   GD  +AL L + M    ++ + V Y  L+
Sbjct: 1110 QVFNEMSKFD---LSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLL 1166

Query: 304  NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            NG C +     A     +M     +   I Y  L++ LCK G LDEA    G + K GV 
Sbjct: 1167 NGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 1226

Query: 364  PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            PD I+Y ++I G C  G+I  A+E +  M    +V    I++ +I  + + G+++ A  +
Sbjct: 1227 PDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 1286

Query: 424  RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              +M   G  ++ FT N L+ +  R G + +A      M   G+ P+  TY+ +I    +
Sbjct: 1287 YAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGS 1346

Query: 484  LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            +G    A   +D+M++ G  P   TY  L+KG C  GN+ EA++   ++  +  A+D + 
Sbjct: 1347 IGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVM 1406

Query: 544  FRILKKRYRRMKESDKARDIHQKWLLRNK 572
            +  L      + E+ K+ ++H+   L +K
Sbjct: 1407 YNTL------LAETCKSGNLHEAVALFDK 1429



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 206/444 (46%), Gaps = 4/444 (0%)

Query: 121  HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
            +  +I  LC  G +  A+ L   M + G  PDV+T++ L+N  C++G+++ A  +I  M 
Sbjct: 1197 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMY 1256

Query: 181  EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                  N   Y+  I  +C+   + +A+ +++ M  NG   +  T N+LV +LC+ G LG
Sbjct: 1257 RSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLG 1316

Query: 241  DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            +A KFL  +          + IT   +++ Y   GD   A + ++DM +         Y 
Sbjct: 1317 EAEKFLCHM---SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYG 1373

Query: 301  VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
             L+ G C  G++  A  +  ++       D + YNTLL   CK G L EA   +  + + 
Sbjct: 1374 SLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQN 1433

Query: 361  GVAPDQISYKTIIQGLCIHGDIVKAR-EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
             V PD  +Y +++ GLC  G  V A   F  +M   ++ P   ++  ++DG  + G    
Sbjct: 1434 NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKA 1493

Query: 420  AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
            AF   + M+  G   +   FNA+I + +R G +  A      M   G+ P++ TYN+L+ 
Sbjct: 1494 AFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLH 1553

Query: 480  ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                   +   L LY  M+R GI PD +T+  LI G    G      ++  K+   G   
Sbjct: 1554 GFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLA 1613

Query: 540  DHIPFRILKKRYRRMKESDKARDI 563
            D   F IL  +Y    +  KA D+
Sbjct: 1614 DQFTFNILINKYSESGKMRKAFDL 1637



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 184/404 (45%), Gaps = 3/404 (0%)

Query: 148  GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
            G  P V T N ++  + K    E    + REMS+    PN  T+N  I G C    L KA
Sbjct: 944  GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 1003

Query: 208  LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             +L   M  NG  P  VT+N L++  CKKG    A++ +  ++        +DV T  + 
Sbjct: 1004 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG---IEADVCTYNVF 1060

Query: 268  MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
            +D+   N    +A  L   M ++ I  + V YN LINGF   G I  A   F +M K   
Sbjct: 1061 IDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDL 1120

Query: 328  LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             P+ +TYN L+   C  G  +EA      +   G+  ++++Y T++ GLC H     A+ 
Sbjct: 1121 SPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKR 1180

Query: 388  FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
             L  M    +V     + V+IDG  + G L  A  +   M   GV+ +V T+++LI    
Sbjct: 1181 LLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC 1240

Query: 448  RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
            R G+I  A  +   M   G+  +   Y+ LI   C  G++  A+++Y  M   G   D  
Sbjct: 1241 RVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHF 1300

Query: 508  TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            T   L+   C  G + EAE+    +  +GL  + I +  +   Y
Sbjct: 1301 TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 1344



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 182/427 (42%), Gaps = 38/427 (8%)

Query: 111  RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
            R TL  ++  +  ++  L   G    A +   +M++KGT PD +  N +++   + G + 
Sbjct: 1468 RGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMM 1527

Query: 171  KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            KA+     M      PN ATYN  + G+ +   L + L L+STM   GI P+++T + L+
Sbjct: 1528 KANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLI 1587

Query: 231  HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
              L K G+    VK LG+                                      M  +
Sbjct: 1588 LGLSKSGIPDLGVKLLGK--------------------------------------MIME 1609

Query: 291  NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
                D   +N+LIN +  +G +  AF     M   G  PD  TYN + N L K+    E+
Sbjct: 1610 GTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRES 1669

Query: 351  SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            +     + + GV P    Y T+I G+C  GDI  A +    M            + ++ G
Sbjct: 1670 TVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRG 1729

Query: 411  YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
               CG   +A  + D ML   +   + TF  L+    R   I +A  LK  M L G+  D
Sbjct: 1730 LLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLD 1789

Query: 471  VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
            V  YN+LI   C  G    A +LY+EM  R + P+I TY  L+    A  N+ + E++  
Sbjct: 1790 VVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLT 1849

Query: 531  KIQTLGL 537
             +Q  GL
Sbjct: 1850 DLQERGL 1856



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 191/439 (43%), Gaps = 37/439 (8%)

Query: 144  MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
            MI+ G  P   T+  L+  LCK G+L +A   +  +  +  + +   YN  +   C+   
Sbjct: 1360 MIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGN 1419

Query: 204  LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            L +A+ LF  M  N + P+  T++ L+  LC+KG    AV   G  +    G    + + 
Sbjct: 1420 LHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGR--GTLFPNHVM 1477

Query: 264  STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             T L+D   K G    A   + +M +K    D VA+N +I+     G +  A  +F  M 
Sbjct: 1478 YTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR 1537

Query: 324  KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
              G  P++ TYN LL+   K+  L      Y  + + G+ PD++++ ++I GL   G   
Sbjct: 1538 WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 1597

Query: 384  KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
               + L  M+ +  + +   +N++I+ Y   G +  AF + + M + GV  +  T+N + 
Sbjct: 1598 LGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIF 1657

Query: 444  LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE------- 496
                +  +  ++  +  EML +G+ P    Y  LI   C +G I  A +L DE       
Sbjct: 1658 NGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG 1717

Query: 497  ----------------------------MLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
                                        MLR  + P I T+T L+   C    + EA ++
Sbjct: 1718 SHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1777

Query: 529  FAKIQTLGLAIDHIPFRIL 547
               ++  GL +D + + +L
Sbjct: 1778 KGVMELCGLKLDVVAYNVL 1796



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 191/414 (46%), Gaps = 8/414 (1%)

Query: 149  TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
            ++P V   + L+    K G ++ A      +  +   P+  T N  +    +    +   
Sbjct: 912  SIPSVF--DLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVW 969

Query: 209  HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
             LF  M++ GI PN  T NIL++ LC +G L  A   L ++   ++      ++T   L+
Sbjct: 970  SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQM---EENGFVPTIVTYNTLL 1026

Query: 269  DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
            + Y K G    A+ L + M  K I+ D+  YNV I+  C N   + A+    +M K    
Sbjct: 1027 NWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMIS 1086

Query: 329  PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
            P+ +TYNTL+N   K+GK+  A+  +  +SK  ++P+ ++Y  +I G C  GD  +A   
Sbjct: 1087 PNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRL 1146

Query: 389  LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
            L  M    +      +  +++G  +      A  + + M    +      +  LI    +
Sbjct: 1147 LDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCK 1206

Query: 449  GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
             G + +A  L   M  DG+ PDV TY+ LI   C +G+I  A ++   M R G+  + I 
Sbjct: 1207 NGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKII 1266

Query: 509  YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKESDK 559
            Y+ LI   C  GN+ EA +V+A +   G   DH    +L     R  ++ E++K
Sbjct: 1267 YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEK 1320



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 192/446 (43%), Gaps = 59/446 (13%)

Query: 139  WLRRKMIQKGTVPDVLTHNYLVNE--LCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            +L+  + Q G     LTH Y +    L K    + A  ++R + +M      + + A + 
Sbjct: 847  FLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSK-SIFGALMD 905

Query: 197  GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
             Y   N +                      ++L+    K+G++  AV+   E++     K
Sbjct: 906  TYPLCNSIPSVF------------------DLLIRVYLKEGMIDYAVETF-ELVGLVGFK 946

Query: 257  ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
             +  V T  +++ S  K+       +L+ +M  K I  ++  +N+LING C+ G++  A 
Sbjct: 947  PS--VYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAG 1004

Query: 317  AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
                QM + GF+P ++TYNTLLN  CK+G+   A      +   G+  D  +Y   I  L
Sbjct: 1005 NLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNL 1064

Query: 377  CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
            C +    KA   L  M ++ + P    +N +I+G+ + G +  A  + + M  F +S N 
Sbjct: 1065 CTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNC 1124

Query: 437  FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN------------- 483
             T+NALI      G   +A  L   M   G+  +  TY  L+   C              
Sbjct: 1125 VTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLER 1184

Query: 484  -------LGHIHL---------------ALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
                   +GHI                 A+QL   M + G+ PD+ITY+ LI G C  GN
Sbjct: 1185 MRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGN 1244

Query: 522  MKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +K A+E+  ++   GL ++ I +  L
Sbjct: 1245 IKSAKEIICRMYRSGLVLNKIIYSTL 1270



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 114/259 (44%), Gaps = 3/259 (1%)

Query: 140  LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
            L  KMI +GT+ D  T N L+N+  + G + KA  ++  M+ +   P+  TYN    G  
Sbjct: 1602 LLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLN 1661

Query: 200  RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
            + +   ++  +   M  NG+ P    +  L++ +C+ G +  A K   E+ A   G   S
Sbjct: 1662 KKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG---S 1718

Query: 260  DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
              +  + ++      G    A+ + + M +  +   I  +  L++ FC +  I+ A    
Sbjct: 1719 HEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLK 1778

Query: 320  CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
              M   G   DV+ YN L+  +C  G    A   Y  +    + P+  +Y  ++  +   
Sbjct: 1779 GVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAA 1838

Query: 380  GDIVKAREFLLSMLEKSVV 398
             ++++  + L  + E+ ++
Sbjct: 1839 NNLIQGEKLLTDLQERGLI 1857



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 29/186 (15%)

Query: 382  IVKAREF-----LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
            +VKAR +     +L  L +  +    I+  ++D Y  C  + + F +             
Sbjct: 873  LVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDL------------- 919

Query: 437  FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
                 LI    + G I  A    + + L G  P V+T N+++ +        L   L+ E
Sbjct: 920  -----LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 974

Query: 497  MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL------KKR 550
            M  +GI P++ T+  LI G C  GN+K+A  +  +++  G     + +  L      K R
Sbjct: 975  MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 1034

Query: 551  YRRMKE 556
            Y+   E
Sbjct: 1035 YKAAIE 1040


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 218/418 (52%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  L L  K   A+ L  +M+ KG  PD++T+  +VN LCK GD + A  ++ +M + 
Sbjct: 191 TLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQG 250

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +  P    Y   I G C+   +D AL+LF  M   GIRPN VT++ L+  LC  G   DA
Sbjct: 251 KLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +++   + K   DV T + L+D++ K G   +A  L+++M +++I   IV Y+ L
Sbjct: 311 SRLLSDMI---ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           INGFC++  +  A   F  M+ +   PDV++Y+TL+   CK  ++DE    +  +S+ G+
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGL 427

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             + ++Y T+IQGL   GD   A+E    M+   V P    +N ++DG  + G L  A  
Sbjct: 428 VGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + +    +   ++T+N +I    + G + D + L   + L G+ PDV  YN +I   C
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             G    A  L+ EM   G  P+   Y  LI+     G+ + + E+  ++++ G A D
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 216/437 (49%), Gaps = 3/437 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C   ++  AL +  KM++ G  P+++T + L+N  C    + +A  ++ +M    
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T+N  I G    N+  +A+ L   M   G +P+ VT+ ++V+ LCK+G    A 
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++   + GK    V+  T ++D   KN     AL L+ +M  K I+ ++V Y+ LI
Sbjct: 242 ILLNKM---EQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G  S A      M++R   PDV T++ L++   K+GKL EA   Y  + K  + 
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P  ++Y ++I G C+H  + +A++    M+ K   P+   ++ +I G+ +   +     +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMEL 418

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+  N  T+  LI    + G    A  + KEM+ DG+ P++ TYN L+   C 
Sbjct: 419 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A+ +++ + R  + P I TY  +I+G C  G +++  ++F  +   G+  D + 
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538

Query: 544 FRILKKRYRRMKESDKA 560
           +  +   + R    ++A
Sbjct: 539 YNTMISGFCRKGSKEEA 555



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 213/431 (49%), Gaps = 5/431 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           DYR  ++  R+     K+  A+ L  +M++    P ++  + L++ + K+   +    + 
Sbjct: 47  DYREKLS--RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLG 104

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M  +    N  TY+  I  +CR ++L  AL +   M   G  PN VT + L++  C  
Sbjct: 105 EQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             + +AV  + ++          + +T   L+   F +    +A+AL + M  K  Q D+
Sbjct: 165 KRISEAVALVDQMFVTG---YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDL 221

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y V++NG C  GD   AF    +M +    P V+ Y T+++ LCK   +D+A + +  
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKE 281

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G+ P+ ++Y ++I  LC +G    A   L  M+E+ + P+   ++ +ID + + G 
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L  A  + D M+   +  ++ T+++LI        + +A  + + M+    FPDV +Y+ 
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYST 401

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C    +   ++L+ EM +RG+  + +TYT LI+G    G+   A+E+F ++ + G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG 461

Query: 537 LAIDHIPFRIL 547
           +  + + +  L
Sbjct: 462 VPPNIMTYNTL 472



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 204/403 (50%), Gaps = 9/403 (2%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           L+ A  +  EM + RP P+   ++  ++   ++N+ D  + L   M N G+  N  T++I
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L++  C++  L  A+  LG+++         +++T + L++ Y  +    +A+AL + MF
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLG---YEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
               Q + V +N LI+G  L+   S A A   +M+ +G  PD++TY  ++N LCK+G  D
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            A      + +  + P  + Y TII GLC +  +  A      M  K + P    ++ +I
Sbjct: 239 LAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 409 D---GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
                YGR  D S   S    M+   ++ +VFTF+ALI A  + G + +A  L  EM+  
Sbjct: 299 SCLCNYGRWSDASRLLSD---MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            I P + TY+ LI   C    +  A Q+++ M+ +   PD+++Y+ LIKG C    + E 
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEG 415

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            E+F ++   GL  + + +  L +   +  + D A++I ++ +
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMV 458



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 180/373 (48%), Gaps = 7/373 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE     +  +I  LC    +  AL L ++M  KG  P+V+T++ L++ LC  G    A 
Sbjct: 252 LEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M E + +P+  T++A I  + +  +L +A  L+  M    I P+ VT++ L++  
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C    L +A +    +++        DV++ + L+  + K     + + L+ +M Q+ + 
Sbjct: 372 CMHDRLDEAKQMFEFMVSK---HCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLV 428

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            + V Y  LI G    GD   A   F +M+  G  P+++TYNTLL+ LCK GKL++A   
Sbjct: 429 GNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  L ++ + P   +Y  +I+G+C  G +    +   ++  K V P+   +N +I G+ R
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G    A ++   M   G   N   +N LI A  R G    +  L KEM   G   D  T
Sbjct: 549 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608

Query: 474 YNLLIGASCNLGH 486
               IG   N+ H
Sbjct: 609 ----IGLVTNMLH 617



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 126/283 (44%), Gaps = 38/283 (13%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V+ +++     + ++I   C+  ++  A  +   M+ K   PDV++++ L+   CK   +
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRV 412

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++   + REMS+     N  TY   I G  +  + D A  +F  M ++G+ PN +T+N L
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LC                                      KNG   +A+ ++  + +
Sbjct: 473 LDGLC--------------------------------------KNGKLEKAMVVFEYLQR 494

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             ++  I  YN++I G C  G +   +  FC +  +G  PDV+ YNT+++  C++G  +E
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           A   +  + + G  P+   Y T+I+     GD   + E +  M
Sbjct: 555 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 4/234 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I+  C   ++   + L R+M Q+G V + +T+  L+  L + GD + A  + 
Sbjct: 395 DVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIF 454

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           +EM      PN  TYN  + G C+  +L+KA+ +F  +  + + P   T+NI++  +CK 
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + D       +          DV+    ++  + + G K +A AL+ +M +     + 
Sbjct: 515 GKVEDGWDLFCNLSLKG---VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             YN LI     +GD  ++     +M   GF  D  T   + N L   G+LD++
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 624



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 55/123 (44%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  +E     +  +I  +C  GK+     L   +  KG  PDV+ +N +++  C+ G  E
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +AD + +EM E    PN   YN  I    R  + + +  L   M + G   +  T  ++ 
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 613

Query: 231 HAL 233
           + L
Sbjct: 614 NML 616


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 211/398 (53%), Gaps = 3/398 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+ KG  PD++T+  +VN LCK GD + A +++ +M + +  P    YN  I G C+  
Sbjct: 6   RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 65

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            +D AL+LF  M   GIRPN VT++ L+  LC  G   DA + L +++   + K   DV 
Sbjct: 66  HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI---ERKINPDVF 122

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T + L+D++ K G   +A  L+++M +++I   IV Y+ LINGFC++  +  A   F  M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           + +   PDV+TYNTL+   CK  +++E    +  +S+ G+  + ++Y  +IQGL   GD 
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A+E    M+   V P    +N ++DG  + G L  A  + + +    +   ++T+N +
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    + G + D + L   + L G+ PDV  YN +I   C  G    A  L+ EM   G 
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            P+   Y  LI+     G+ + + E+  ++++ G A D
Sbjct: 363 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 400



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 174/353 (49%), Gaps = 3/353 (0%)

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + L   M   G +P+ VT+ ++V+ LCK+G    A   L ++   + GK    V+    +
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM---EQGKLEPGVLIYNTI 57

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D   K      AL L+ +M  K I+ ++V Y+ LI+  C  G  S A      M++R  
Sbjct: 58  IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 117

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PDV T++ L++   K+GKL EA   Y  + K  + P  ++Y ++I G C+H  + +A++
Sbjct: 118 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 177

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M+ K   P+   +N +I G+ +   +     +   M   G+  N  T+N LI    
Sbjct: 178 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 237

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G    A  + KEM+ DG+ P++ TYN L+   C  G +  A+ +++ + R  + P I 
Sbjct: 238 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 297

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           TY  +I+G C  G +++  ++F  +   G+  D + +  +   + R    ++A
Sbjct: 298 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 350



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 175/355 (49%), Gaps = 3/355 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC    +  AL L ++M  KG  P+V+T++ L++ LC  G    A  ++ +M E 
Sbjct: 56  TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 115

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           + +P+  T++A I  + +  +L +A  L+  M    I P+ VT++ L++  C    L +A
Sbjct: 116 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 175

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +    +++        DV+T   L+  + K     + + ++ +M Q+ +  + V YN+L
Sbjct: 176 KQMFEFMVSK---HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 232

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G    GD   A   F +M+  G  P+++TYNTLL+ LCK GKL++A   +  L ++ +
Sbjct: 233 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 292

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P   +Y  +I+G+C  G +    +   ++  K V P+   +N +I G+ R G    A +
Sbjct: 293 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 352

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
           +   M   G   N   +N LI A  R G    +  L KEM   G   D  T  L+
Sbjct: 353 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 407



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 38/283 (13%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V+ +++     + ++I   C+  ++  A  +   M+ K   PDV+T+N L+   CK   +
Sbjct: 148 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 207

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E+   V REMS+     N  TYN  I G  +  + D A  +F  M ++G+ PN +T+N L
Sbjct: 208 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 267

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LC                                      KNG   +A+ ++  + +
Sbjct: 268 LDGLC--------------------------------------KNGKLEKAMVVFEYLQR 289

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             ++  I  YN++I G C  G +   +  FC +  +G  PDV+ YNT+++  C++G  +E
Sbjct: 290 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 349

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           A   +  + + G  P+   Y T+I+     GD   + E +  M
Sbjct: 350 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 392



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 4/234 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I+  C   ++   + + R+M Q+G V + +T+N L+  L + GD + A  + 
Sbjct: 190 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 249

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           +EM      PN  TYN  + G C+  +L+KA+ +F  +  + + P   T+NI++  +CK 
Sbjct: 250 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 309

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + D       +          DV+    ++  + + G K +A AL+ +M +     + 
Sbjct: 310 GKVEDGWDLFCNLSLKG---VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 366

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             YN LI     +GD  ++     +M   GF  D  T   + N L   G+LD++
Sbjct: 367 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 419



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 55/123 (44%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  +E     +  +I  +C  GK+     L   +  KG  PDV+ +N +++  C+ G  E
Sbjct: 289 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 348

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +AD + +EM E    PN   YN  I    R  + + +  L   M + G   +  T  ++ 
Sbjct: 349 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 408

Query: 231 HAL 233
           + L
Sbjct: 409 NML 411


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 238/469 (50%), Gaps = 38/469 (8%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L+R M+ KG VPD+ T++ L+N  C      +A  ++ EM ++   P   TYNA I 
Sbjct: 260 AIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALID 319

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G+ R  ++++A  +   M   GI  N +  N L++ +CK G +  A++ + E++   +  
Sbjct: 320 GFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM---EKG 376

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D  T ++L++ + +  +  +A  L ++M ++ +   ++ Y+V+ING C  G++    
Sbjct: 377 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 436

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           A   +M+  G  P+ + Y TL+    K+G+++E+      + + G+ PD   Y ++I G 
Sbjct: 437 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 496

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY------------------------- 411
           C    + +AR +L+ MLE+ + P  H +   IDGY                         
Sbjct: 497 CKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNV 556

Query: 412 --------GRC--GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
                   G C  G+++ AFS+   +LS  V  +V T++ LI   +R G + +AF +  E
Sbjct: 557 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 616

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           +   G+ P+ FTYN LI  SC  G++  A QL +EM  +GI PDI+TY  LI G C  G 
Sbjct: 617 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 676

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           ++ A+ +F  I+  GL  + + +  +   Y + K    A  + ++ LLR
Sbjct: 677 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLR 725



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 227/446 (50%), Gaps = 3/446 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I      G I  A  ++ +M+  G   +++  N L+N +CK G +EKA  +++EM E 
Sbjct: 316 ALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEK 375

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY+  I G+CR   + +A  L   M    + P  +T++++++ LC+ G L   
Sbjct: 376 GVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGT 435

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E++ +       + +  T LM ++ K G   ++  +   M ++ I  D+  YN L
Sbjct: 436 NAILREMVMNG---LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 492

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I GFC    +  A  Y  +ML+R   P+  TY   ++   K G+++ A  ++  +   GV
Sbjct: 493 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGV 552

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+   Y  +I+G C  G++ +A      +L + V+ +   ++V+I G  R G +  AF 
Sbjct: 553 LPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFG 612

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I   +   G+  N FT+N+LI    + G++  A  L +EM + GI PD+ TYN+LI   C
Sbjct: 613 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLC 672

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G I  A  L+D++  RG+TP+ +TY  ++ G+C   N   A ++  ++   G+  D  
Sbjct: 673 KAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAF 732

Query: 543 PFRILKKRYRRMKESDKARDIHQKWL 568
            + ++     + ++ +KA D+ Q+ L
Sbjct: 733 IYNVILNFCCKEEKFEKALDLFQEML 758



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 232/454 (51%), Gaps = 9/454 (1%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           +++ L+ ++ M + G     +E D + +  +I   C G  +  A  L  +M ++   P V
Sbjct: 362 MEKALEIMQEMMEKG-----VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTV 416

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           LT++ ++N LC+ G+L+  + ++REM      PN   Y   +T + +   ++++  +   
Sbjct: 417 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 476

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   GI P+   +N L+   CK   + +A  +L E+L   + +   +  T    +D Y K
Sbjct: 477 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEML---ERRLRPNAHTYGAFIDGYSK 533

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G+   A   +N+M    +  ++  Y  LI G C  G+++ AF+ F  +L R  L DV T
Sbjct: 534 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 593

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y+ L++ L + GK+ EA   +  L + G+ P+  +Y ++I G C  G++ KA + L  M 
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 653

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            K + P+   +N++IDG  + G++  A ++ D +   G++ N  T+ A++    +  +  
Sbjct: 654 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 713

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            AF L +EMLL G+ PD F YN+++   C       AL L+ EML +G     +++  LI
Sbjct: 714 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLI 772

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +G+C  G ++EA  +  ++       +H+ +  L
Sbjct: 773 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 806



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 217/422 (51%), Gaps = 4/422 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++  +  +  +M ++G +PDV  +N L+   CK   +E+A   + EM E R  PN  TY
Sbjct: 465 GRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 524

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
            AFI GY +  E++ A   F+ M + G+ PN   +  L+   CK+G + +A      +L+
Sbjct: 525 GAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILS 584

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
               +   DV T ++L+    +NG   +A  +++++ +K +  +   YN LI+G C  G+
Sbjct: 585 R---RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGN 641

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A     +M  +G  PD++TYN L++ LCK G+++ A + +  +   G+ P+ ++Y  
Sbjct: 642 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 701

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++ G C   +   A + L  ML + V P+  I+NVI++   +      A  +   ML  G
Sbjct: 702 MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 761

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
            +S V +FN LI    + G + +A  L +EM+     P+  TY  LI  +C  G +  A 
Sbjct: 762 FASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAK 820

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +L+ EM  R + P   TYT L+ G+   GNM E   +F ++   G+  D + + ++   Y
Sbjct: 821 RLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAY 880

Query: 552 RR 553
            R
Sbjct: 881 CR 882



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 215/421 (51%), Gaps = 16/421 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I   C  G +  A  + R ++ +  + DV T++ L++ L + G + +A  +  E+ 
Sbjct: 559 YTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 618

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TYN+ I+G C+   +DKA  L   M   GI P+ VT+NIL+  LCK G + 
Sbjct: 619 EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIE 678

Query: 241 DAVKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            A     ++    +G+  T + +T   ++D Y K+ +   A  L  +M  + +  D   Y
Sbjct: 679 RAKNLFDDI----EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIY 734

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           NV++N  C       A   F +ML++GF    +++NTL+   CK GKL EA+H    + +
Sbjct: 735 NVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIE 793

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
               P+ ++Y ++I   C  G + +A+   L M E++V+P    +  ++ GY   G++S 
Sbjct: 794 KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE 853

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
             ++ + M++ G+  +  T+  +I A  R G++ +A  LK E+L+ G+ P    + L + 
Sbjct: 854 VSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGM-PMKSGFRLGL- 911

Query: 480 ASCNL--------GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            +C++        G++  A ++   M++ G   +  +  +L+ G+    N ++++ +  +
Sbjct: 912 PTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQ 971

Query: 532 I 532
           +
Sbjct: 972 M 972



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 206/475 (43%), Gaps = 88/475 (18%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP---------------NRV----- 224
           SPN   ++  +  Y ++  L +A+++F    N   RP               N+V     
Sbjct: 151 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 210

Query: 225 ---------------THNILVHALCKKGLLGDAVKFLGEV-----LADD---------DG 255
                          T+  ++ A CK G + DA + L E+     L D+         D 
Sbjct: 211 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDK 270

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               D+ T  IL++ +       +A  +  +M    ++ + + YN LI+GF   GDI  A
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 330

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           F    +M+  G   ++I +NTLLN +CK GK+++A      + + GV PD  +Y  +I+G
Sbjct: 331 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 390

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C   ++ +A E L  M ++ + P    ++VII+G  RCG+L    +I   M+  G+  N
Sbjct: 391 HCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPN 450

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC------------- 482
              +  L+ A  + G + ++  + + M   GI PDVF YN LI   C             
Sbjct: 451 AVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM 510

Query: 483 ----------------------NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
                                   G + +A + ++EML  G+ P++  YT LI+GHC  G
Sbjct: 511 EMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEG 570

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRN 571
           N+ EA  VF  I +  +  D   + +L     R  +  +A     ++ +K LL N
Sbjct: 571 NVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN 625


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 230/455 (50%), Gaps = 3/455 (0%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
            D   +  +I   C  G +G A  +   M  KG  P + T+N ++N LCK G   +A  V
Sbjct: 218 ADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGV 277

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
             EM  +  SP+  TYN  +   CR N   +A  +FS M + G+ P+ ++ + L+    +
Sbjct: 278 FNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSR 337

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G L  A+ +  ++          D +  TIL++ Y +NG   +AL + + M ++    D
Sbjct: 338 NGHLDQALMYFRDM---KTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALD 394

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           +VAYN ++NG C    ++ A A F +M++RG +PD  T+ TL++  CK+G + +A   +G
Sbjct: 395 VVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFG 454

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
           ++++  + PD ++Y  +I G C   ++ KA E    M+ + + P    + ++++GY   G
Sbjct: 455 IMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLG 514

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            +S AF + D M+  G+   + T N +I    R G +  A     +M+ +G+ PD  TYN
Sbjct: 515 FVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYN 574

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            LI       ++  A  L ++M  +G+ PD++TY  ++ G C +G M+EAE +  K+   
Sbjct: 575 TLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIER 634

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           G+  D   +  L   Y       +A   H + L R
Sbjct: 635 GIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQR 669



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 218/429 (50%), Gaps = 3/429 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A  +  ++ + G   +V T N +VN LCK   ++     + +M +     +  TY
Sbjct: 164 GWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTY 223

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I  YCR   L +A  + ++M+  G++P   T+N +++ LCKKG    A     E+L+
Sbjct: 224 NTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLS 283

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                 + D  T   L+    +N +  +A  +++DM  + +  D+++++ LI     NG 
Sbjct: 284 IG---LSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGH 340

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A  YF  M   G +PD + Y  L+N  C+ G + EA      + + G A D ++Y T
Sbjct: 341 LDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNT 400

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           I+ GLC    +  A      M+E+ VVP+   +  +I G+ + G++  A S+  +M    
Sbjct: 401 ILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKN 460

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  ++ T+N LI    +   +  A  L  EM+   IFP+  +Y +L+   CNLG +  A 
Sbjct: 461 IKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAF 520

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +L+DEM+R+GI P ++T   +IKG+C  G++ +A+E   K+ + G+  D I +  L   +
Sbjct: 521 RLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGF 580

Query: 552 RRMKESDKA 560
            + +  DKA
Sbjct: 581 VKGEYMDKA 589



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 194/362 (53%), Gaps = 3/362 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+ +G  PD+++ + L+    + G L++A    R+M      P+   Y   I GYCR   
Sbjct: 316 MLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGM 375

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           + +AL +   M   G   + V +N +++ LCKK LL DA     E++   +     D  T
Sbjct: 376 MSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMV---ERGVVPDFCT 432

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            T L+  + K G+  +AL+L+  M QKNI+ DIV YN+LI+GFC   ++  A   + +M+
Sbjct: 433 FTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMI 492

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            R   P+ I+Y  L+N  C  G + EA   +  + + G+ P  ++  T+I+G C  GD+ 
Sbjct: 493 SRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLS 552

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           KA EFL  M+ + V P+   +N +I+G+ +   +  AF + + M + G+  +V T+N ++
Sbjct: 553 KADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVIL 612

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               R G + +A  + ++M+  GI PD  TY  LI    +  ++  A + +DEML+RG  
Sbjct: 613 NGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFV 672

Query: 504 PD 505
           PD
Sbjct: 673 PD 674



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 189/360 (52%), Gaps = 3/360 (0%)

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N+ + G  ++  +D A  +++ +A +GI  N  T NI+V+ALCK   + D   FL ++  
Sbjct: 154 NSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDM-- 211

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            +     +D++T   L+++Y + G   +A  + N M  K ++  +  YN +ING C  G 
Sbjct: 212 -EQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGR 270

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A   F +ML  G  PD  TYNTLL   C+     EA   +  +   GV+PD IS+ +
Sbjct: 271 YVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSS 330

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I     +G + +A  +   M    +VP+  I+ ++I+GY R G +S A  IRD ML  G
Sbjct: 331 LIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG 390

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
            + +V  +N ++    +   + DA +L  EM+  G+ PD  T+  LI   C  G++  AL
Sbjct: 391 CALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKAL 450

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            L+  M ++ I PDI+TY  LI G C    M++A E++ ++ +  +  +HI + IL   Y
Sbjct: 451 SLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGY 510



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 138/275 (50%)

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D + +++LI  +     ++     F  + ++GFL  +   N+LL  L K G +D A   
Sbjct: 113 VDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEV 172

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  ++++G+  +  +   ++  LC    I   + FL+ M +K +  +   +N +I+ Y R
Sbjct: 173 YNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCR 232

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G L  AF + + M   G+   +FT+NA+I    + G    A  +  EML  G+ PD  T
Sbjct: 233 EGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTT 292

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN L+  SC   +   A  ++ +ML RG++PD+I+++ LI      G++ +A   F  ++
Sbjct: 293 YNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMK 352

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           T GL  D++ + IL   Y R     +A +I  K L
Sbjct: 353 TSGLVPDNVIYTILINGYCRNGMMSEALEIRDKML 387


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/391 (32%), Positives = 210/391 (53%), Gaps = 3/391 (0%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R+MI  G   +V ++N L+   C  G+LE       EM   R  PN  TYN  I  YC++
Sbjct: 192 REMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKL 251

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
             +D+A  L  +M   G+ PN +T+N++++ LC+ G + +    L E+  D  G A  D 
Sbjct: 252 KRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEM--DRKGFA-PDG 308

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T   L++ Y K G+  QAL L ++M +  +  D+V Y  LIN  C  G+++ A  +F Q
Sbjct: 309 VTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQ 368

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M  RG  P+ +TY +L+N   ++G +DEA   +  + ++G  P  ++Y  ++ G C+ G 
Sbjct: 369 MHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGR 428

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + +A   L  M  K + P+   ++ II G+ R  +L  AF +   M+  GVS +  T+++
Sbjct: 429 MEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSS 488

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI        + +A  L +EML   + PD FTY  LI   C  G ++ AL L+DEM+++G
Sbjct: 489 LIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKG 548

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
             PD +TY  LI G   +   +EA+ +  K+
Sbjct: 549 FLPDTVTYNVLINGLNKQARTREAKRLLLKL 579



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 224/429 (52%), Gaps = 18/429 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI   C   +I  A  L R M  +G  P++LT+N ++N LC++G +E+   V+ EM    
Sbjct: 244 VIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKG 303

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  TYN  + GYC+V    +AL L S M  NG+ P+ VT+  L++ +CK G L  A+
Sbjct: 304 FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAM 363

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +F  ++          + +T T L++ + + G   +A  +W++M +      IV YN L+
Sbjct: 364 EFFDQMHVRG---LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALL 420

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C++G +  A      M  +G  PDV++Y+T++   C+  +LD A      + + GV+
Sbjct: 421 NGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVS 480

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD I+Y ++IQGLC    + +A +    ML KS++P+   +  +I+GY + GDL+ A ++
Sbjct: 481 PDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNL 540

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS-- 481
            D M+  G   +  T+N LI    +     +A  L  ++  D   P+  TY+ LI +   
Sbjct: 541 HDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSD 600

Query: 482 -------------CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
                        C  G ++ A Q+++ M++R   P+   Y  +I GHC  GN+ +A ++
Sbjct: 601 IEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKL 660

Query: 529 FAKIQTLGL 537
           + ++   G 
Sbjct: 661 YKEMVDFGF 669



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 216/424 (50%), Gaps = 18/424 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR  C  G +   L    +M +   +P+V+T+N ++   CK+  +++A  ++R M    
Sbjct: 209 LIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEG 268

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYN  I G CRV  +++   + + M   G  P+ VT+N LV+  CK G    A+
Sbjct: 269 LEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQAL 328

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+L +       DV+T T L+++  K G+  +A+  ++ M  + ++ + V Y  LI
Sbjct: 329 VLHSEMLRNG---LPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLI 385

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NGF   G +  A+  + +M++ GF P ++TYN LLN  C  G+++EA      +   G++
Sbjct: 386 NGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLS 445

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +SY TII G C + ++ +A +    M+EK V P+   ++ +I G      L+ A  +
Sbjct: 446 PDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDL 505

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              ML+  +  + FT+ +LI    + G + +A +L  EM+  G  PD  TYN+LI     
Sbjct: 506 FQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNK 565

Query: 484 LGHIHLALQL-----YDEMLRRGITPDII----------TYTELIKGHCARGNMKEAEEV 528
                 A +L     YDE +  GIT D +          +   LIKG C +G M EA++V
Sbjct: 566 QARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQV 625

Query: 529 FAKI 532
           F  +
Sbjct: 626 FESM 629



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 202/422 (47%), Gaps = 39/422 (9%)

Query: 148 GTVPDVLTHNYLVNELCKI-GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           G +P VL++N +++ + +    +  A+ V REM     S N  +YN  I G+C    L+ 
Sbjct: 162 GFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEM 221

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
            L  F  M  N   PN VT+N ++ A CK   + +A K                      
Sbjct: 222 GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFK---------------------- 259

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
                           L   M  + ++ +++ YN++ING C  G I        +M ++G
Sbjct: 260 ----------------LLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKG 303

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           F PD +TYNTL+N  CK G   +A   +  + + G+ PD ++Y ++I  +C  G++ +A 
Sbjct: 304 FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAM 363

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           EF   M  + + P    +  +I+G+ + G +  A+ I D M+  G    + T+NAL+   
Sbjct: 364 EFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGH 423

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + +A  L + M   G+ PDV +Y+ +I   C    +  A Q+  EM+ +G++PD 
Sbjct: 424 CVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDA 483

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           ITY+ LI+G C +  + EA ++F ++    L  D   +  L   Y +  + ++A ++H +
Sbjct: 484 ITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDE 543

Query: 567 WL 568
            +
Sbjct: 544 MI 545



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 191/410 (46%), Gaps = 18/410 (4%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  L  D   + ++I  +C  G +  A+    +M  +G  P+ +T+  L+N   + G +
Sbjct: 335 LRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFM 394

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  +  EM      P   TYNA + G+C    +++A+ L   M   G+ P+ V+++ +
Sbjct: 395 DEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTI 454

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +   C+   L  A +   E++   +   + D IT + L+    +     +A  L+ +M  
Sbjct: 455 IAGFCRYQELDRAFQMNAEMV---EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLN 511

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K++  D   Y  LING+C  GD++ A     +M+K+GFLPD +TYN L+N L KQ +  E
Sbjct: 512 KSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTRE 571

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQ---------------GLCIHGDIVKAREFLLSMLE 394
           A      L      P+ I+Y T+I+               G C+ G + +A +   SM++
Sbjct: 572 AKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIK 631

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           ++  P   ++NVII G+ R G++  A  +   M+ FG   +  T  AL+ A    G    
Sbjct: 632 RNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQ 691

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              + +++L      D      L+  +   G+I     L  EM + G  P
Sbjct: 692 LNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLP 741


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 235/458 (51%), Gaps = 15/458 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC  G++  A+ L  +M++ G  P+ +T+  +V+ +CK+GD   A +++R+M E+
Sbjct: 182 TLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEV 241

Query: 183 -RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
            R  PN   Y+A I G  +      A +LFS M   GI PN  T+N +++  C  G   +
Sbjct: 242 SRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSE 301

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A + L E+    + K + DV+T ++L+++  K G  F+A  L+N+M  + I  + + YN 
Sbjct: 302 AQRLLREMF---ERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNS 358

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +I+GF     + +A   F  M  +G  PDVIT++ L++  C   ++D+       +S+ G
Sbjct: 359 MIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRG 418

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           +  + I+Y T+I G C  G++  A + L  M+   V P     N ++DG    G L +A 
Sbjct: 419 LVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDAL 478

Query: 422 SIRDLMLSFG-----------VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            +  +M               V  +V T+N LI      G   +A  L +EM   G+ PD
Sbjct: 479 EMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPD 538

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             TYN +I   C    +  A Q++D M  +G +PD++T+T LI G+C  G + +  EVF 
Sbjct: 539 TITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFC 598

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           ++   G+  + I +R L   + ++   + A DI Q+ +
Sbjct: 599 EMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMI 636



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 210/416 (50%), Gaps = 14/416 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  L   G+   A  L  +M +KG  P++ T+N ++N  C  G   +A  ++REM 
Sbjct: 251 YSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMF 310

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E + SP+  T++  I    +  +  +A  L++ M   GI PN +T+N ++    K+  L 
Sbjct: 311 ERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRL- 369

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA + +  ++A      + DVIT +IL+D Y         + L ++M ++ +  + + Y 
Sbjct: 370 DAAERMFYLMATKG--CSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYT 427

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+GFC  G++++A     +M+  G  P+V+T NTLL+ LC  GKL +A   + V+ K+
Sbjct: 428 TLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKS 487

Query: 361 G-----------VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
                       V PD  +Y  +I GL   G   +A E    M  + +VP+   +N +ID
Sbjct: 488 KMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVID 547

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  +   L  A  + D M S G S +V TF  LI    + G + D   +  EM   GI  
Sbjct: 548 GLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVA 607

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           +  TY  LI   C +G+I+ AL ++ EM+  G+ PD IT   ++ G  ++  +K A
Sbjct: 608 NAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 227/488 (46%), Gaps = 27/488 (5%)

Query: 64  CRSKTRHWFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRD----------TGPVRCT 113
           C    RH  + K S   G     F    L L+     +K + D          + P+ C 
Sbjct: 21  CTRSIRHTLAKKSSGKAGG----FGGERLKLQSGFHEIKGLDDAIDLFGYMVRSRPLPCV 76

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D+ + + V+  +    +    + L RKM  +    ++ +   L+   C    L  A 
Sbjct: 77  I--DFCKLLGVVVRM---ERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFAL 131

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
               +++++   P+  T++  + G C  + + +ALH F  +     +PN +    L++ L
Sbjct: 132 STFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQIC----KPNVIAFTTLMNGL 187

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ-KNI 292
           C++G + +AV  L  ++  +DG   + +   TI+ D   K GD   AL L   M +   I
Sbjct: 188 CREGRVVEAVALLDRMV--EDGLQPNQITYGTIV-DGMCKMGDTVSALNLLRKMEEVSRI 244

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           + ++V Y+ +I+G   +G  + A   F +M ++G  P++ TYN ++N  C  G+  EA  
Sbjct: 245 KPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQR 304

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               + +  ++PD +++  +I  L   G   +A E    ML + ++P    +N +IDG+ 
Sbjct: 305 LLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFS 364

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +   L  A  +  LM + G S +V TF+ LI        + D   L  EM   G+  +  
Sbjct: 365 KQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTI 424

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY  LI   C LG+++ AL L  EM+  G+ P+++T   L+ G C  G +K+A E+F  +
Sbjct: 425 TYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVM 484

Query: 533 QTLGLAID 540
           Q   + +D
Sbjct: 485 QKSKMDLD 492



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 193/415 (46%), Gaps = 55/415 (13%)

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF-LGEVLAD-- 252
           +G+  +  LD A+ LF  M  +   P        V   CK  LLG  V+    +V+    
Sbjct: 49  SGFHEIKGLDDAIDLFGYMVRSRPLP-------CVIDFCK--LLGVVVRMERPDVVISLH 99

Query: 253 ---DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
              +  +   ++ + TIL+  +        AL+ +  + +      +V ++ L++G C+ 
Sbjct: 100 RKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVE 159

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
             +S A  +F Q+ K    P+VI + TL+N LC++G++ EA      + + G+ P+QI+Y
Sbjct: 160 DRVSEALHFFHQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITY 215

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKS-VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
            TI+ G+C  GD V A   L  M E S + P   I++ IIDG  + G  ++A ++   M 
Sbjct: 216 GTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQ 275

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G+S N+FT+N +I      G   +A  L +EM    + PDV T+++LI A    G   
Sbjct: 276 EKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFF 335

Query: 489 LALQLYDEMLRRGI-----------------------------------TPDIITYTELI 513
            A +LY+EML RGI                                   +PD+IT++ LI
Sbjct: 336 EAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILI 395

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            G+C    + +  ++  ++   GL  + I +  L   + ++   + A D+ Q+ +
Sbjct: 396 DGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMI 450



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 14/277 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C   ++   + L  +M ++G V + +T+  L++  C++G+L  A  +++EM    
Sbjct: 394 LIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMAN-----------NGIRPNRVTHNILVHA 232
             PN  T N  + G C   +L  AL +F  M             N + P+  T+NIL+  
Sbjct: 454 VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICG 513

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           L  +G   +A +   E+          D IT   ++D   K     +A  +++ M  K  
Sbjct: 514 LINEGKFSEAEELYEEM---PHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGF 570

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D+V +  LING+C  G +      FC+M +RG + + ITY TL++  C+ G ++ A  
Sbjct: 571 SPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALD 630

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
            +  +  +GV PD I+ + ++ GL    ++ +A + L
Sbjct: 631 IFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 122/251 (48%), Gaps = 5/251 (1%)

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +M  R    ++ ++  L+ C C   KL  A   +G ++K G  P  +++ T++ GLC+  
Sbjct: 101 KMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVED 160

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            + +A  F   + + +V+     +  +++G  R G +  A ++ D M+  G+  N  T+ 
Sbjct: 161 RVSEALHFFHQICKPNVIA----FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 216

Query: 441 ALILAETRGGSIFDAFSLKKEML-LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
            ++    + G    A +L ++M  +  I P+V  Y+ +I      G    A  L+ EM  
Sbjct: 217 TIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQE 276

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
           +GI+P++ TY  +I G C+ G   EA+ +  ++    ++ D + F +L     +  +  +
Sbjct: 277 KGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFE 336

Query: 560 ARDIHQKWLLR 570
           A +++ + L R
Sbjct: 337 AEELYNEMLPR 347



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 6/164 (3%)

Query: 94  LKENLDRLKTMR------DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           LK+ L+  K M+      D       +E D + +  +I  L   GK   A  L  +M  +
Sbjct: 474 LKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHR 533

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VPD +T+N +++ LCK   L++A  +   M     SP+  T+   I GYC+V  +   
Sbjct: 534 GLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDG 593

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           L +F  M   GI  N +T+  L+H  C+ G +  A+    E+++
Sbjct: 594 LEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMIS 637



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 61/124 (49%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +VI  LC   ++  A  +   M  KG  PDV+T   L+N  CK+G +     V  EM   
Sbjct: 544 SVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRR 603

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N  TY   I G+C+V  ++ AL +F  M ++G+ P+ +T   ++  L  K  L  A
Sbjct: 604 GIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663

Query: 243 VKFL 246
           V+ L
Sbjct: 664 VQCL 667


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 220/418 (52%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  L L  K   A+ L  +M+ +G  PD+ T+  +VN LCK GD++ A  ++++M + 
Sbjct: 191 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 250

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +   N   YN  I G C+   +D A  LF+ M   GI+P+  T+N L+  LC  G   DA
Sbjct: 251 KIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDA 310

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +++   + K   +V+T   L+D++ K G   +A  L+++M Q++I  +IV YN L
Sbjct: 311 SRLLSDMI---ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 367

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           INGFC++  +  A   F  M+ +  LPDV+TYNTL+   CK  +++E    +  +S+ G+
Sbjct: 368 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 427

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             + ++Y T+IQGL   GD   A++    M+   V P+   +++++DG  + G L  A  
Sbjct: 428 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 487

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + +    +  N++T+N +I    + G + D + L   + L G+ P+V  Y  +I   C
Sbjct: 488 VFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 547

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             G    A  L+ EM   G  PD   Y  LI+     G+   + E+  ++++ G   D
Sbjct: 548 RKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 605



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 212/410 (51%), Gaps = 3/410 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
            C   ++  AL +  KM++ G  PD++T + L+N  C    + +A  ++ +M EM   P+
Sbjct: 126 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPD 185

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             T+N  I G    N+  +A+ L   M   G +P+  T+  +V+ LCK+G +  A+  L 
Sbjct: 186 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 245

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           ++   + GK  ++V+    ++D   K      A  L+N M  K I+ D+  YN LI+  C
Sbjct: 246 KM---EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLC 302

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G  S A      M++R   P+V+T+N+L++   K+GKL EA   +  + +  + P+ +
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 362

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y ++I G C+H  + +A++    M+ K  +P+   +N +I G+ +   +     +   M
Sbjct: 363 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREM 422

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              G+  N  T+N LI    + G    A  + K+M+ DG+ PD+ TY++L+   C  G +
Sbjct: 423 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 482

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
             AL +++ + +  + P+I TY  +I+G C  G +++  ++F  +   G+
Sbjct: 483 EKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 204/403 (50%), Gaps = 9/403 (2%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           L+ A  +  EM + RP P+   ++  ++   ++N+ D  + L   M N GI  N  T++I
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L++  C++  L  A+  LG+++         D++T + L++ Y       +A+AL + M 
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLG---YEPDIVTLSSLLNGYCHGKRISEAVALVDQMV 178

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           +   + D V +N LI+G  L+   S A A   +M+ RG  PD+ TY T++N LCK+G +D
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 238

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            A      + K  +  + + Y TII GLC +  +  A +    M  K + P+   +N +I
Sbjct: 239 LALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLI 298

Query: 409 D---GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
                YGR  D S   S    M+   ++ NV TFN+LI A  + G + +A  L  EM+  
Sbjct: 299 SCLCNYGRWSDASRLLSD---MIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 355

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            I P++ TYN LI   C    +  A Q++  M+ +   PD++TY  LIKG C    ++E 
Sbjct: 356 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEG 415

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            E+F ++   GL  + + +  L +   +  + D A+ I +K +
Sbjct: 416 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 458



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 210/431 (48%), Gaps = 5/431 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           DYR  ++  R+     K+  A+ L  +M++    P ++  + L++ + K+   +    + 
Sbjct: 47  DYREKLS--RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLG 104

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M  +    N  TY+  +  +CR ++L  AL +   M   G  P+ VT + L++  C  
Sbjct: 105 EQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 164

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             + +AV  + +++   +     D +T   L+   F +    +A+AL + M  +  Q D+
Sbjct: 165 KRISEAVALVDQMV---EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 221

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y  ++NG C  GDI  A +   +M K     +V+ YNT+++ LCK   +D+A   +  
Sbjct: 222 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNK 281

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G+ PD  +Y ++I  LC +G    A   L  M+E+ + P    +N +ID + + G 
Sbjct: 282 METKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGK 341

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L  A  + D M+   +  N+ T+N+LI        + +A  +   M+     PDV TYN 
Sbjct: 342 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 401

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C    +   ++L+ EM +RG+  + +TY  LI+G    G+   A+++F K+ + G
Sbjct: 402 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 461

Query: 537 LAIDHIPFRIL 547
           +  D I + IL
Sbjct: 462 VPPDIITYSIL 472



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 159/330 (48%), Gaps = 3/330 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   + ++I  LC  G+   A  L   MI++   P+V+T N L++   K G L +A+
Sbjct: 287 IKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAE 346

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM +    PN  TYN+ I G+C  + LD+A  +F+ M +    P+ VT+N L+   
Sbjct: 347 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGF 406

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   + + ++   E+          + +T   L+   F+ GD   A  ++  M    + 
Sbjct: 407 CKAKRVEEGMELFREM---SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 463

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DI+ Y++L++G C  G +  A   F  + K    P++ TYN ++  +CK GK+++    
Sbjct: 464 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDL 523

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  LS  GV P+ I Y T+I G C  G   +A      M E   +P+   +N +I    R
Sbjct: 524 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLR 583

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            GD + +  +   M S G   +  T + +I
Sbjct: 584 DGDKAASAELIKEMRSCGFVGDASTISMVI 613



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 141/278 (50%), Gaps = 3/278 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A  L  +MIQ+   P+++T+N L+N  C    L++A  +   M      P+  TY
Sbjct: 340 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 399

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I G+C+   +++ + LF  M+  G+  N VT+N L+  L + G    A K   ++++
Sbjct: 400 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 459

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
           D       D+IT +IL+D   K G   +AL ++  + +  ++ +I  YN++I G C  G 
Sbjct: 460 DG---VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGK 516

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +   +  FC +  +G  P+VI Y T+++  C++G  +EA   +  + + G  PD   Y T
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNT 576

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           +I+     GD   + E +  M     V +    +++I+
Sbjct: 577 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 614



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 141/298 (47%), Gaps = 7/298 (2%)

Query: 82  NPQAV-FNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
           NP  V FN+L D   KE  L   + + D    R +++ +   + ++I   C+  ++  A 
Sbjct: 323 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQ 381

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            +   M+ K  +PDV+T+N L+   CK   +E+   + REMS+     N  TYN  I G 
Sbjct: 382 QIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 441

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            +  + D A  +F  M ++G+ P+ +T++IL+  LCK G L  A+    E L     K  
Sbjct: 442 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF-EYL--QKSKME 498

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            ++ T  I+++   K G       L+  +  K ++ +++ Y  +I+GFC  G    A A 
Sbjct: 499 PNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 558

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           F +M + G LPD   YNTL+    + G    ++     +   G   D  +   +I  L
Sbjct: 559 FREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 616


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/443 (30%), Positives = 220/443 (49%), Gaps = 3/443 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I  LC+      A  L   M ++G  P  +T+N +++  CK G LE+A  +I++M 
Sbjct: 48  YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 107

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    P+  TYN  + G C+ + +++AL LF+ M   G  PNR +HN ++  LC++  + 
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A +   E+ A D      D  +  IL+D   K G   +A  L+  M    I    V YN
Sbjct: 168 QACQVFHEMEAKD---IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYN 224

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           V+I+G CL   +  A   F  M  +G  P   T+N L++  CK+GKLDEA      ++  
Sbjct: 225 VVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDD 284

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  PD ++Y T+I GLC    +  AR  L  M+++   P     N +I G  + G +  A
Sbjct: 285 GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + D M+S G S +V T+N L+    R G    A  L  +M+  G+ P+V TY  L+  
Sbjct: 345 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSG 404

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    +  A  ++ +M   G  P++ TYT LI G C+ G +    ++F ++   G++ D
Sbjct: 405 LCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464

Query: 541 HIPFRILKKRYRRMKESDKARDI 563
           H+ +  L     +   S +A +I
Sbjct: 465 HVVYGTLAAELCKSGRSARALEI 487



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 201/404 (49%), Gaps = 3/404 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M ++   PD  ++  L++ L K G L  A ++ +++     +P+   Y + I G C  N 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            D A  LF+ M   G  P+ VT+N+++ A CK+G+L +A   + +++ D       DV+T
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGH---VPDVVT 117

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              +MD   K+    +AL L+N+M +     +  ++N +I G C    I  A   F +M 
Sbjct: 118 YNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            +   PD  +Y  L++ L K GKL+EA   +  +  +G+ P  ++Y  +I G+C+   + 
Sbjct: 178 AKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLD 237

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A E   SM  K   P    +N++ID + + G L  AF +   M   G   +V T++ LI
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 297

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                   + DA  L ++M+     P V T N LI   C  G I  A ++ D M+  G +
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           PD++TY  L+ GHC  G  + A E+ + +   GLA + + +  L
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTAL 401



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 208/480 (43%), Gaps = 45/480 (9%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +L+E  D +K M + G V      D   +  V+  LC   ++  AL L  +M + G  P+
Sbjct: 95  MLEEACDLIKKMIEDGHV-----PDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPN 149

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
             +HN ++  LC+   +++A  V  EM      P+  +Y   I G  +  +L++A  LF 
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQ 209

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M ++GI P+ VT+N+++H +C    L +A++    + +           T  IL+D++ 
Sbjct: 210 RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG---CRPSRFTFNILIDAHC 266

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G   +A  L   M       D+V Y+ LI+G C    +  A      M+KR   P V+
Sbjct: 267 KRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 326

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           T NTL++ LCK G++ EA      +  +G +PD ++Y T++ G C  G   +ARE L  M
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           + + + P    +  ++ G  +   L  A  +   M S G + N+FT+ ALIL     G +
Sbjct: 387 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV 446

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASC------------------------------ 482
                L  EM+  GI PD   Y  L    C                              
Sbjct: 447 DGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYR 506

Query: 483 -------NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
                    G + +AL    +M+R G  P       L+ G C  G   EA  V  +I  L
Sbjct: 507 FAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDL 566



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 162/384 (42%), Gaps = 70/384 (18%)

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
           + D  +  IL+D   K G    A  L+  +    +    VAY  LI+G C+      A  
Sbjct: 7   SPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 66

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            F  M +RG  P  +TYN +++  CK+G L+EA      + + G  PD ++Y T++ GLC
Sbjct: 67  LFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 126

Query: 378 -------------------------IHGDIV----------KAREFLLSMLEKSVVPEPH 402
                                     H  I+          +A +    M  K + P+  
Sbjct: 127 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSW 186

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV-------------------------- 436
            + ++IDG  + G L+ A+ +   ML  G++ +                           
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 437 ---------FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
                    FTFN LI A  + G + +AF L K M  DG  PDV TY+ LI   C++  +
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A  L ++M++R   P ++T   LI G C  G +KEA EV   + + G + D + +  L
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366

Query: 548 KKRYRRMKESDKARDIHQKWLLRN 571
              + R  ++++AR++    + R 
Sbjct: 367 VHGHCRAGQTERARELLSDMVARG 390



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 132/274 (48%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M ++N+  D  +Y +LI+G    G ++ A   F ++L  G  P  + Y +L++ LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
            D+A   +  +++ G  P  ++Y  +I   C  G + +A + +  M+E   VP+   +N 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           ++DG  +   +  A  + + M   G + N  + N +IL   +   I  A  +  EM    
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           I PD ++Y +LI      G ++ A +L+  ML  GITP  +TY  +I G C    + EA 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           E+F  +++ G       F IL   + +  + D+A
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEA 274



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 35/247 (14%)

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M +R   PD  +Y  L++ L K GKL++A + +  L  +GV P  ++Y ++I GLC+   
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
              ARE    M  +   P P                                    T+N 
Sbjct: 61  FDDARELFADMNRRGCPPSP-----------------------------------VTYNV 85

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I A  + G + +A  L K+M+ DG  PDV TYN ++   C    +  AL L++EM R G
Sbjct: 86  MIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLG 145

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
            TP+  ++  +I G C +  + +A +VF +++   +  D   + IL     +  + ++A 
Sbjct: 146 CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAY 205

Query: 562 DIHQKWL 568
            + Q+ L
Sbjct: 206 KLFQRML 212


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 233/458 (50%), Gaps = 15/458 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC  G++  A+ L  +M++ G  P+ +T+  +V+ +CKIGD   A +++R+M EM
Sbjct: 183 TLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEM 242

Query: 183 RP-SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               PN   Y+A I G  +      A +L++ M   GI P+  T+N ++   C  G   +
Sbjct: 243 SHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSE 302

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A + L E+L   + K   +V+T + L+++Y K    F+A  L+++M  + I  + + YN 
Sbjct: 303 AQRLLQEML---ERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNS 359

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +I+GFC    + +A   F  M  +G  PDV T+NTL++  C   ++D+ +     +++TG
Sbjct: 360 MIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETG 419

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           +  D  +Y T+I G C+ GD+  A +    M+   V P+    N ++DG    G L +A 
Sbjct: 420 LVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 479

Query: 422 SIRDLMLSF-----------GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            +   M              GV  +V T+N LI      G   +A  L KEM   GI P+
Sbjct: 480 EMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPN 539

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             TY+ +I   C    +  A Q++D M  +  +PD++T+  L+ G+C  G + +  E+F 
Sbjct: 540 TITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFC 599

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           ++   G+  D I +  L   +R++   + A DI Q+ +
Sbjct: 600 EMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMI 637



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 209/424 (49%), Gaps = 14/424 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  L   G+   A  L  +M +KG  PD+ T+N +++  C  G   +A  +++EM 
Sbjct: 252 YSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEML 311

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E + +PN  TY+A I  Y +  +  +A  L+  M   GI PN +T+N ++   CK+  L 
Sbjct: 312 ERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRL- 370

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA + +  V+A      + DV T   L+D Y           L ++M +  +  D   YN
Sbjct: 371 DAAEHMFYVMATKG--CSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYN 428

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+GFCL GD+++A     QM+  G  PD++T NTLL+ LC  GKL +A   +  + K+
Sbjct: 429 TLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 488

Query: 361 -----------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
                      GV PD  +Y  +I GL   G  ++A E    M  + +VP    ++ +I+
Sbjct: 489 KMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMIN 548

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  +   L  A  + D M S   S +V TFN L+    + G + D   L  EM   GI  
Sbjct: 549 GLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVA 608

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D  TY  LI     +G+I+ AL ++ EM+  G+ PD IT   ++    ++  +K A  + 
Sbjct: 609 DAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAML 668

Query: 530 AKIQ 533
             +Q
Sbjct: 669 EDLQ 672



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 230/488 (47%), Gaps = 24/488 (4%)

Query: 64  CRSKTRHWFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRD----------TGPVRCT 113
           C    RH  + K  D E   +A F    L L+     +K + D          + P+   
Sbjct: 19  CTRSIRHALAKKSRDGESG-EAGFRGESLKLRSGFHEIKGLEDAIDLFSDMVRSRPLPSV 77

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D+ + + V+  +    +    + L +KM +K    DV + N L+   C    L  A 
Sbjct: 78  I--DFNKLMGVVVRM---ERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFAL 132

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
               +++++   P+  T++  + G C  + + +AL LF  M     RPN VT   L++ L
Sbjct: 133 STFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMC----RPNVVTFTTLMNGL 188

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ-KNI 292
           C++G + +AV  L  ++  +DG   + +   TI+ D   K GD   AL L   M +  +I
Sbjct: 189 CREGRVVEAVALLDRMV--EDGLQPNQITYGTIV-DGMCKIGDTVSALNLLRKMEEMSHI 245

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           + ++V Y+ +I+G   +G  S A   + +M ++G  PD+ TYN +++  C  G+  EA  
Sbjct: 246 KPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQR 305

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               + +  + P+ ++Y  +I          +A E    ML + ++P    +N +IDG+ 
Sbjct: 306 LLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFC 365

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +   L  A  +  +M + G S +VFTFN LI        I D   L  EM   G+  D  
Sbjct: 366 KQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTT 425

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TYN LI   C +G ++ AL L  +M+  G+ PDI+T   L+ G C  G +K+A E+F  +
Sbjct: 426 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 485

Query: 533 QTLGLAID 540
           Q   + +D
Sbjct: 486 QKSKMDLD 493



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 186/414 (44%), Gaps = 26/414 (6%)

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           +I  LE A  +  +M   RP P+   +N  +    R+   D  + L+  M    I  +  
Sbjct: 54  EIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVY 113

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           + NIL+   C    L  A+   G++          DV+T + L+          +AL   
Sbjct: 114 SFNILIKCFCSCSKLPFALSTFGKITK---LGFQPDVVTFSTLLHGLCVEDRVSEAL--- 167

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
            D+F +  + ++V +  L+NG C  G +  A A   +M++ G  P+ ITY T+++ +CK 
Sbjct: 168 -DLFHQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKI 226

Query: 345 G----------KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           G          K++E SH         + P+ + Y  II GL   G    A      M E
Sbjct: 227 GDTVSALNLLRKMEEMSH---------IKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQE 277

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K + P+   +N +IDG+   G  S A  +   ML   ++ NV T++ALI A  +    F+
Sbjct: 278 KGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFE 337

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L  EML  GI P+  TYN +I   C    +  A  ++  M  +G +PD+ T+  LI 
Sbjct: 338 AEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLID 397

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+C    + +  E+  ++   GL  D   +  L   +  + + + A D+ Q+ +
Sbjct: 398 GYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMI 451



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 142/293 (48%), Gaps = 7/293 (2%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP-DVITYNTLL 338
           A+ L++DM +      ++ +N L+ G  +  +         Q ++R  +P DV ++N L+
Sbjct: 61  AIDLFSDMVRSRPLPSVIDFNKLM-GVVVRMERPDLVISLYQKMERKQIPCDVYSFNILI 119

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
            C C   KL  A   +G ++K G  PD +++ T++ GLC+   + +A +    M   +VV
Sbjct: 120 KCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPNVV 179

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
                +  +++G  R G +  A ++ D M+  G+  N  T+  ++    + G    A +L
Sbjct: 180 ----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNL 235

Query: 459 KKEML-LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
            ++M  +  I P+V  Y+ +I      G    A  LY EM  +GI PD+ TY  +I G C
Sbjct: 236 LRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFC 295

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           + G   EA+ +  ++    +  + + +  L   Y + ++  +A +++ + L R
Sbjct: 296 SSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPR 348



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 9/200 (4%)

Query: 94  LKENLDRLKTMR------DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           LK+ L+  K M+      D       +E D + +  +I  L   GK   A  L ++M  +
Sbjct: 475 LKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHR 534

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VP+ +T++ ++N LCK   L++A  +   M     SP+  T+N  ++GYC+   +D  
Sbjct: 535 GIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDG 594

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           L LF  M   GI  + +T+  L+H   K G +  A+    E+++        D IT   +
Sbjct: 595 LELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMIS---SGVYPDTITIRSM 651

Query: 268 MDSYFKNGDKFQALALWNDM 287
           +   +   +  +A+A+  D+
Sbjct: 652 LTVLWSKEELKRAVAMLEDL 671


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 140/418 (33%), Positives = 221/418 (52%), Gaps = 10/418 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  LC GG++  A  L  +MI+ G  PDV+T+N L++  CK+G L++A  +     + 
Sbjct: 90  ALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKR 149

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYNA I G+C+ ++LD+A  +   M +  + P+ VT+N LV+ LCK G + +A
Sbjct: 150 GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEA 209

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ-ALALWNDMFQKNIQTDIVAYNV 301
                 +L  D G  + +VIT + L+    +   + + A  L   M     + DIV+YN 
Sbjct: 210 -----RMLIVDKG-FSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNA 263

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LI+G      +S A   F  +L++G+ P+V TYN L++ L K+ +++EA   +  L K G
Sbjct: 264 LIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHG 323

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD I+Y   I GLC  G +  A   L  M EK  VP+    N +I+G  +   +  A 
Sbjct: 324 LEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAE 383

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   M + G S N  +FN LI  + R G    A +  KEML  G+ P V TYN+L+   
Sbjct: 384 VLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGL 443

Query: 482 CNL---GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           C     G I  A+ L+D M+ +G  PD++TY+ LI G    G + +A  +   ++  G
Sbjct: 444 CKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG 501



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/426 (31%), Positives = 222/426 (52%), Gaps = 10/426 (2%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
           G V+     D   + A+I   C   K+  A  + ++M+ +  VPDV+T+N LVN LCK G
Sbjct: 145 GAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNG 204

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCR-VNELDKALHLFSTMANNGIRPNRVTH 226
            +++A  +I +      SPN  TY+  I+G CR +  L+ A  L   M  NG +P+ V++
Sbjct: 205 RVDEARMLIVDKGF---SPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSY 261

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           N L+H L ++  + +A+K  G VL         +V T  IL+D   K     +A  L++ 
Sbjct: 262 NALIHGLAREQGVSEALKLFGSVLRQG---YEPEVPTYNILIDGLLKEDRVNEAFELFSG 318

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           + +  ++ D + Y V I+G C  G +  A      M ++G +PDV+++N ++N LCK+ +
Sbjct: 319 LVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKR 378

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           +DEA      +   G +P+ IS+ T+I G C  G   KA      ML++ V P    +N+
Sbjct: 379 VDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNI 438

Query: 407 IIDGYGRC---GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           ++DG  +    G +  A ++ D M+  G   +V T++ALI    + G + DA  L   M 
Sbjct: 439 LVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAME 498

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             G  P+V+TYN LI   C L  +  AL+L+  M+ +G  PD ITY  +I   C +  + 
Sbjct: 499 AKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVD 558

Query: 524 EAEEVF 529
           +A  +F
Sbjct: 559 KALALF 564



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 208/422 (49%), Gaps = 8/422 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD  T   L+  L K G +EKA   + ++  ++   + +T+N +I+G CR + +  A  +
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLL-VKGLCDISTFNIYISGLCRASRIGDAQTV 72

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M  +G  PNR+T+N L+  LC  G + DA      ++       + DV+T   L+  
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMI---KAGYSPDVVTYNTLLHG 129

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + K G   +AL +++   ++    D+V YN LINGFC    +  A     +M+    +PD
Sbjct: 130 FCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPD 189

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH-GDIVKAREFL 389
           V+TYN+L+N LCK G++DEA      +   G +P+ I+Y T+I GLC     +  AR+ L
Sbjct: 190 VVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLL 246

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M+     P+   +N +I G  R   +S A  +   +L  G    V T+N LI    + 
Sbjct: 247 EKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKE 306

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             + +AF L   ++  G+ PD  TY + I   C  G +  AL +  +M  +G  PD++++
Sbjct: 307 DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSH 366

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
             +I G C    + EAE + + ++  G + + I F  L     R  +  KA    ++ L 
Sbjct: 367 NAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLK 426

Query: 570 RN 571
           R 
Sbjct: 427 RG 428



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 214/445 (48%), Gaps = 22/445 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R L   GKI  A     +++ KG + D+ T N  ++ LC+   +  A  V   M +  
Sbjct: 22  LLRSLLKSGKIEKAHRFVEQLLVKG-LCDISTFNIYISGLCRASRIGDAQTVFDGMRKHG 80

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYNA ++G C    +  A  L+  M   G  P+ VT+N L+H  CK G L +A+
Sbjct: 81  FWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEAL 140

Query: 244 KFLGEVLADDDGKA----TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           K         DG        DV+T   L++ + K     +A  +   M  +++  D+V Y
Sbjct: 141 KIF-------DGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTY 193

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ-GKLDEASHFYGVLS 358
           N L+NG C NG +  A      ++ +GF P+VITY+TL++ LC++  +L+ A      + 
Sbjct: 194 NSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMV 250

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G  PD +SY  +I GL     + +A +   S+L +   PE   +N++IDG  +   ++
Sbjct: 251 LNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVN 310

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            AF +   ++  G+  +  T+   I    + G + DA  + K+M   G  PDV ++N +I
Sbjct: 311 EAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVI 370

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C    +  A  L   M  +G +P+ I++  LI G C  G  K+A   F ++   G+ 
Sbjct: 371 NGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVK 430

Query: 539 IDHIPFRIL------KKRYRRMKES 557
              + + IL       ++  R+KE+
Sbjct: 431 PTVVTYNILVDGLCKARQEGRIKEA 455



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 161/305 (52%), Gaps = 10/305 (3%)

Query: 90  LDLILKENLDRLKTMRD--TGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           +D +LKE  DR+    +  +G V+  LE D   +   I  LC  G++  AL + + M +K
Sbjct: 300 IDGLLKE--DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 357

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VPDV++HN ++N LCK   +++A+ ++  M     SPN  ++N  I G CR  +  KA
Sbjct: 358 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 417

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCK---KGLLGDAVKFLGEVLADDDGKATSDVITS 264
           +  F  M   G++P  VT+NILV  LCK   +G + +A+     ++  + G+   DV+T 
Sbjct: 418 MTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI--EKGR-VPDVVTY 474

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           + L+D   K G    A  L   M  K    ++  YN LI+G C    +  A   F  M++
Sbjct: 475 SALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVE 534

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           +G +PD ITY T+++ LCKQ  +D+A   +    + GV P    Y ++I GLC    + +
Sbjct: 535 KGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDE 594

Query: 385 AREFL 389
           A + L
Sbjct: 595 ALKLL 599



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 177/344 (51%), Gaps = 16/344 (4%)

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           DK + ++S        P+  T  IL+ +L K G +  A +F+ ++L     K   D+ T 
Sbjct: 6   DKLVRIYS--------PDAYTVGILLRSLLKSGKIEKAHRFVEQLLV----KGLCDISTF 53

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
            I +    +      A  +++ M +     + + YN L++G C  G +S A A + +M+K
Sbjct: 54  NIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIK 113

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G+ PDV+TYNTLL+  CK GKLDEA   +    K G  PD ++Y  +I G C    + +
Sbjct: 114 AGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDE 173

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A+  L  M+ +S+VP+   +N +++G  + G +  A   R L++  G S NV T++ LI 
Sbjct: 174 AQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEA---RMLIVDKGFSPNVITYSTLIS 230

Query: 445 AETRG-GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
              R    +  A  L ++M+L+G  PD+ +YN LI        +  AL+L+  +LR+G  
Sbjct: 231 GLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYE 290

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           P++ TY  LI G      + EA E+F+ +   GL  D I + + 
Sbjct: 291 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVF 334



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 1/199 (0%)

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           +PD  +   +++ L   G I KA  F+  +L K +  +   +N+ I G  R   + +A +
Sbjct: 13  SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQT 71

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M   G   N  T+NAL+     GG + DA +L + M+  G  PDV TYN L+   C
Sbjct: 72  VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            +G +  AL+++D  ++RG  PD++TY  LI G C    + EA+ +  ++ +  L  D +
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 543 PFRILKKRYRRMKESDKAR 561
            +  L     +    D+AR
Sbjct: 192 TYNSLVNGLCKNGRVDEAR 210


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 134/413 (32%), Positives = 220/413 (53%), Gaps = 12/413 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AVIR       +  A  + ++M++ G  P+V T+N L+   C  G+LE       EM   
Sbjct: 176 AVIRT---KQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERN 232

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN  I  YC++ ++ +A  L   MA  G+ PN +++N++++ LC++G + + 
Sbjct: 233 GCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKET 292

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L E+      +   D +T   L++ Y   G+  QAL L  +M +  +  ++V Y  L
Sbjct: 293 SEILEEM---SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTL 349

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           IN  C  G+++ A  +  QM  RG  P+  TY TL++   +QG L +A      + + G 
Sbjct: 350 INSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  I+Y  +I G CI G +  A   L  M+E+  +P+   ++ II G+ R  +L  AF 
Sbjct: 410 TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQ 469

Query: 423 IRDLMLSFGVSSNVFTFNALILA---ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           ++  M++ G+S +V T+++LI     + R G + D F   +EML  G+ PD  TY  LI 
Sbjct: 470 LKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLF---QEMLSLGLPPDEVTYTSLIN 526

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           A C  G +  AL+L+DEM+++G +PDI+TY  LI G   +   KEA+ +  K+
Sbjct: 527 AYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 230/452 (50%), Gaps = 19/452 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C   KIG A  L R M  KG  P+++++N ++N LC+ G +++   ++ EMS+ 
Sbjct: 243 TIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKR 302

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R  P+  T+N  I GYC V    +AL L + M  NG+ PN VT+  L++++CK G L  A
Sbjct: 303 RYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA 362

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++FL ++    D     +  T T L+D + + G   QA  +  +M +      I+ YN L
Sbjct: 363 MEFLDQM---RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNAL 419

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING C+ G +  A     +M++RGF+PDV++Y+T+++  C+  +L++A      +   G+
Sbjct: 420 INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           +PD  +Y ++IQGLC    + +  +    ML   + P+   +  +I+ Y   GDL  A  
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M+  G S ++ T+N LI    +     +A  L  ++L +   P+  TYN LI    
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCN 599

Query: 483 NL---------------GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           NL               G ++ A ++ + ML++G   +   Y  +I GH   GN+++A  
Sbjct: 600 NLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYN 659

Query: 528 VFAKIQTLGLAIDHIPFRILKKR-YRRMKESD 558
           ++ ++   G A   +    L K  Y   KE +
Sbjct: 660 LYKEMLHSGFAPHSVTIMALAKSLYHEGKEVE 691



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 215/422 (50%), Gaps = 4/422 (0%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEK-ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           G +P VL++N +++ + +     K A+ + +EM E   SPN  TYN  I G+C    L+ 
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
            L  F  M  NG  PN VT+N ++ A CK   +G+A K L  ++A        ++I+  +
Sbjct: 222 GLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLL-RLMALKG--LNPNLISYNV 278

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +++   + G   +   +  +M ++    D V +N LING+C  G+   A     +M+K G
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+V+TY TL+N +CK G L+ A  F   +   G+ P+  +Y T+I G    G + +A 
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAY 398

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + +  M+E    P    +N +I+G+   G + +A  +   M+  G   +V +++ +I   
Sbjct: 399 QIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF 458

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            R   +  AF LK EM+  GI PDV TY+ LI   C    +     L+ EML  G+ PD 
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDE 518

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +TYT LI  +C  G++ +A  +  ++   G + D + + +L   + +   + +A+ +  K
Sbjct: 519 VTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLK 578

Query: 567 WL 568
            L
Sbjct: 579 LL 580



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 211/413 (51%), Gaps = 4/413 (0%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK-ALHLFSTMANN 217
           +V    ++  + KA  ++         P   +YNA +    R  +  K A  +F  M  +
Sbjct: 138 VVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES 197

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G+ PN  T+NIL+   C  G L   + F GE+   +      +V+T   ++D+Y K    
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLFFFGEM---ERNGCLPNVVTYNTIIDAYCKLRKI 254

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +A  L   M  K +  ++++YNV+ING C  G +        +M KR ++PD +T+NTL
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTL 314

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +N  C  G   +A   +  + K G++P+ ++Y T+I  +C  G++ +A EFL  M ++ +
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P    +  +IDG+ + G L  A+ I   M+  G +  + T+NALI      G + DA  
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASG 434

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L +EM+  G  PDV +Y+ +I   C    +  A QL  EM+ +GI+PD+ TY+ LI+G C
Sbjct: 435 LLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLC 494

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            +  + E  ++F ++ +LGL  D + +  L   Y    + DKA  +H + + +
Sbjct: 495 KQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK 547



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 226/460 (49%), Gaps = 18/460 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR  C  G +   L+   +M + G +P+V+T+N +++  CK+  + +A  ++R M+   
Sbjct: 209 LIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN  +YN  I G CR  ++ +   +   M+     P+RVT N L++  C  G    A+
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E++ +     + +V+T T L++S  K G+  +A+   + M  + +  +   Y  LI
Sbjct: 329 VLHAEMVKNG---LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLI 385

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GF   G +  A+    +M++ GF P +ITYN L+N  C  G++++AS     + + G  
Sbjct: 386 DGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFI 445

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +SY TII G C + ++ KA +  + M+ K + P+   ++ +I G  +   L     +
Sbjct: 446 PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDL 505

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              MLS G+  +  T+ +LI A    G +  A  L  EM+  G  PD+ TYN+LI     
Sbjct: 506 FQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNK 565

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELI---------------KGHCARGNMKEAEEV 528
                 A +L  ++L     P+ ITY  LI               KG C +G M EA+ V
Sbjct: 566 QSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRV 625

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
              +   G  ++   + ++   + ++   +KA +++++ L
Sbjct: 626 LESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEML 665



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 195/415 (46%), Gaps = 36/415 (8%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L   ++ L  MRD G     L  + R +  +I      G +  A  + ++M++ G  P +
Sbjct: 359 LNRAMEFLDQMRDRG-----LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTI 413

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N L+N  C +G +E A  +++EM E    P+  +Y+  I+G+CR  EL+KA  L   
Sbjct: 414 ITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVE 473

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   GI P+  T++ L+  LCK+  LG+      E+L+        D +T T L+++Y  
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG---LPPDEVTYTSLINAYCI 530

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            GD  +AL L ++M QK    DIV YNVLINGF        A     ++L    +P+ IT
Sbjct: 531 EGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEIT 590

Query: 334 YNTLL-NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT---IIQGLCIHGDIVKAREFL 389
           YNTL+ NC                        + + +K+   +++G C+ G + +A   L
Sbjct: 591 YNTLIDNC------------------------NNLEFKSALALMKGFCMKGLMNEADRVL 626

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
            SML+K       ++NVII G+ + G++  A+++   ML  G + +  T  AL  +    
Sbjct: 627 ESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHE 686

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           G   +   L    L      +     +LIG +   G++     +  +M   G+ P
Sbjct: 687 GKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 134/413 (32%), Positives = 220/413 (53%), Gaps = 12/413 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AVIR       +  A  + ++M++ G  P+V T+N L+   C  G+LE       EM   
Sbjct: 176 AVIRT---KQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERN 232

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN  I  YC++ ++ +A  L   MA  G+ PN +++N++++ LC++G + + 
Sbjct: 233 GCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKET 292

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L E+      +   D +T   L++ Y   G+  QAL L  +M +  +  ++V Y  L
Sbjct: 293 SEILEEM---SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTL 349

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           IN  C  G+++ A  +  QM  RG  P+  TY TL++   +QG L +A      + + G 
Sbjct: 350 INSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  I+Y  +I G CI G +  A   L  M+E+  +P+   ++ II G+ R  +L  AF 
Sbjct: 410 TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQ 469

Query: 423 IRDLMLSFGVSSNVFTFNALILA---ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           ++  M++ G+S +V T+++LI     + R G + D F   +EML  G+ PD  TY  LI 
Sbjct: 470 LKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLF---QEMLSLGLPPDEVTYTSLIN 526

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           A C  G +  AL+L+DEM+++G +PDI+TY  LI G   +   KEA+ +  K+
Sbjct: 527 AYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 230/452 (50%), Gaps = 19/452 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C   KIG A  L R M  KG  P+++++N ++N LC+ G +++   ++ EMS+ 
Sbjct: 243 TIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKR 302

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R  P+  T+N  I GYC V    +AL L + M  NG+ PN VT+  L++++CK G L  A
Sbjct: 303 RYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA 362

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++FL ++    D     +  T T L+D + + G   QA  +  +M +      I+ YN L
Sbjct: 363 MEFLDQM---RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNAL 419

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING C+ G +  A     +M++RGF+PDV++Y+T+++  C+  +L++A      +   G+
Sbjct: 420 INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           +PD  +Y ++IQGLC    + +  +    ML   + P+   +  +I+ Y   GDL  A  
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M+  G S ++ T+N LI    +     +A  L  ++L +   P+  TYN LI    
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCN 599

Query: 483 NL---------------GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           NL               G ++ A ++ + ML++G   +   Y  +I GH   GN+++A  
Sbjct: 600 NLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYN 659

Query: 528 VFAKIQTLGLAIDHIPFRILKKR-YRRMKESD 558
           ++ ++   G A   +    L K  Y   KE +
Sbjct: 660 LYKEMLHSGFAPHSVTIMALAKSLYHEGKEVE 691



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 215/422 (50%), Gaps = 4/422 (0%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEK-ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           G +P VL++N +++ + +     K A+ + +EM E   SPN  TYN  I G+C    L+ 
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
            L  F  M  NG  PN VT+N ++ A CK   +G+A K L  ++A        ++I+  +
Sbjct: 222 GLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLL-RLMALKG--LNPNLISYNV 278

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +++   + G   +   +  +M ++    D V +N LING+C  G+   A     +M+K G
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+V+TY TL+N +CK G L+ A  F   +   G+ P+  +Y T+I G    G + +A 
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAY 398

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + +  M+E    P    +N +I+G+   G + +A  +   M+  G   +V +++ +I   
Sbjct: 399 QIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF 458

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            R   +  AF LK EM+  GI PDV TY+ LI   C    +     L+ EML  G+ PD 
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDE 518

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +TYT LI  +C  G++ +A  +  ++   G + D + + +L   + +   + +A+ +  K
Sbjct: 519 VTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLK 578

Query: 567 WL 568
            L
Sbjct: 579 LL 580



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 211/413 (51%), Gaps = 4/413 (0%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK-ALHLFSTMANN 217
           +V    ++  + KA  ++         P   +YNA +    R  +  K A  +F  M  +
Sbjct: 138 VVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES 197

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G+ PN  T+NIL+   C  G L   + F GE+   +      +V+T   ++D+Y K    
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLXFFGEM---ERNGCLPNVVTYNTIIDAYCKLRKI 254

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +A  L   M  K +  ++++YNV+ING C  G +        +M KR ++PD +T+NTL
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTL 314

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +N  C  G   +A   +  + K G++P+ ++Y T+I  +C  G++ +A EFL  M ++ +
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P    +  +IDG+ + G L  A+ I   M+  G +  + T+NALI      G + DA  
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASG 434

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L +EM+  G  PDV +Y+ +I   C    +  A QL  EM+ +GI+PD+ TY+ LI+G C
Sbjct: 435 LLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLC 494

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            +  + E  ++F ++ +LGL  D + +  L   Y    + DKA  +H + + +
Sbjct: 495 KQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK 547



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 195/415 (46%), Gaps = 36/415 (8%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L   ++ L  MRD G     L  + R +  +I      G +  A  + ++M++ G  P +
Sbjct: 359 LNRAMEFLDQMRDRG-----LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTI 413

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N L+N  C +G +E A  +++EM E    P+  +Y+  I+G+CR  EL+KA  L   
Sbjct: 414 ITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVE 473

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   GI P+  T++ L+  LCK+  LG+      E+L+        D +T T L+++Y  
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG---LPPDEVTYTSLINAYCI 530

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            GD  +AL L ++M QK    DIV YNVLINGF        A     ++L    +P+ IT
Sbjct: 531 EGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEIT 590

Query: 334 YNTLL-NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT---IIQGLCIHGDIVKAREFL 389
           YNTL+ NC                        + + +K+   +++G C+ G + +A   L
Sbjct: 591 YNTLIDNC------------------------NNLEFKSALALMKGFCMKGLMNEADRVL 626

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
            SML+K       ++NVII G+ + G++  A+++   ML  G + +  T  AL  +    
Sbjct: 627 ESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHE 686

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           G   +   L    L      +     +LIG +   G++     +  +M   G+ P
Sbjct: 687 GKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 219/443 (49%), Gaps = 3/443 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I  LC+      A  L   M ++G  P  +T+N +++  CK G LE+A  +I++M 
Sbjct: 48  YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMI 107

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    P+  TYN  + G C+   +++AL LF+ M   G  PNR +HN ++  LC++  + 
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A +   E+ A D      D  +  IL+D   K G   +A  L+  M    I    V YN
Sbjct: 168 QACQVFHEMEARD---IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYN 224

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           V+I+G CL   +  A   F  M  +G  P   T+N L++  CK+GK+DEA      ++  
Sbjct: 225 VVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDD 284

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  PD ++Y T+I GLC    +  AR  L  M+++   P     N +I G  + G +  A
Sbjct: 285 GHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + D M+S G S +V T+N L+    R G    A  L  +M+  G+ P+V TY  L+  
Sbjct: 345 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSG 404

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    +  A  ++ +M   G  P++ TYT LI G C+ G +    ++F ++   G++ D
Sbjct: 405 LCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464

Query: 541 HIPFRILKKRYRRMKESDKARDI 563
           H+ +  L     +   S +A +I
Sbjct: 465 HVVYGTLAAELCKSGRSARALEI 487



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 201/404 (49%), Gaps = 3/404 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M ++   PD  ++  L++ L K G L  A  + +++     +P+   Y + I G C  N 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            D A  LF+ M   G  P+ VT+N+++ A CK+G+L +A   + +++ D       DV+T
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGH---VPDVVT 117

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              +MD   K+G   +AL L+N+M +     +  ++N +I G C    I  A   F +M 
Sbjct: 118 YNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            R   PD  +Y  L++ L K GKL+EA   +  +  +G+ P  ++Y  +I G+C+   + 
Sbjct: 178 ARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLD 237

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A E   SM  K   P    +N++ID + + G +  AF +   M   G   +V T++ LI
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLI 297

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                   + DA  L ++M+     P V T N LI   C  G I  A ++ D M+  G +
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           PD++TY  L+ GHC  G  + A E+ + +   GLA + + +  L
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTAL 401



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 196/394 (49%), Gaps = 5/394 (1%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M+E   SP+  +Y   I G  +  +L+ A  LF  + ++G+ P+ V +  L+H LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 239 LGDAVKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
             DA     E+ AD + +      +T  +++D+  K G   +A  L   M +     D+V
Sbjct: 61  FDDAR----ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVV 116

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            YN +++G C +G +  A   F +M + G  P+  ++NT++  LC+Q K+D+A   +  +
Sbjct: 117 TYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
               + PD  SY  +I GL   G + +A +    ML+  + P    +NV+I G      L
Sbjct: 177 EARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTL 236

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             A  +   M S G   + FTFN LI A  + G + +AF L K M  DG  PDV TY+ L
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTL 296

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I   C++  +  A  L ++M++R   P ++T   LI G C  G +KEA EV   + + G 
Sbjct: 297 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 356

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           + D + +  L   + R  ++++AR++    + R 
Sbjct: 357 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 210/480 (43%), Gaps = 45/480 (9%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +L+E  D +K M + G V      D   +  V+  LC  G++  AL L  +M + G  P+
Sbjct: 95  MLEEACDLIKKMIEDGHV-----PDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPN 149

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
             +HN ++  LC+   +++A  V  EM      P+  +Y   I G  +  +L++A  LF 
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFR 209

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M ++GI P+ VT+N+++H +C    L +A++    + +           T  IL+D++ 
Sbjct: 210 RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG---CRPSRFTFNILIDAHC 266

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G   +A  L   M       D+V Y+ LI+G C    +  A      M+KR   P V+
Sbjct: 267 KRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 326

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           T NTL++ LCK G++ EA      +  +G +PD ++Y T++ G C  G   +ARE L  M
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           + + + P    +  ++ G  +   L  A  +   M S G + N+FT+ ALIL     G +
Sbjct: 387 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV 446

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASC------------------------------ 482
                L  EM+  GI PD   Y  L    C                              
Sbjct: 447 DGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYR 506

Query: 483 -------NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
                  + G + +AL    +M+R G  P       L+ G C  G   EA  V  +I  L
Sbjct: 507 FAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDL 566


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 247/478 (51%), Gaps = 12/478 (2%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +L + L+  + M + G +R T+ T    +  ++   C GG++  AL L  KM ++G  P 
Sbjct: 217 LLVKALEVYRMMGEYG-IRPTVTT----YNTMLHSFCKGGEVQRALDLVPKMQERGCYPS 271

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSE--MRPSPNCATYNAFITGYCRVNELDKALHL 210
            +T N L+N L K G+L++A  +I+EM++  +R SP   TYN  I GYC+   L +AL L
Sbjct: 272 EVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSP--YTYNPLICGYCKKGLLVEALAL 329

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           +  M   G+ P   +HN +++  CK+G + DA + L ++L  +      D+I+   L+  
Sbjct: 330 WEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKN---LMPDIISYNTLIYG 386

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + + G+  +A  L +++  +N+  +IV YN LI+G C  GD+ +A      M+ RG  PD
Sbjct: 387 FCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPD 446

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+TY  L+N  CK G +  A  F+  +   G+APDQ +Y   I G    GD  KA +   
Sbjct: 447 VVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQE 506

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            ML K   P+   +NV ++G  + G+L  A  +   M+  G   +  T+ + + A    G
Sbjct: 507 EMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENG 566

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +   +  +ML  G  P V TY +LI A    G +  A+  + EM  +G+ P++ITY 
Sbjct: 567 HLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYN 626

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            LI G C    M +A + F ++Q  G+  +   + IL      M +  +A  ++ + L
Sbjct: 627 VLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQML 684



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/426 (31%), Positives = 218/426 (51%), Gaps = 8/426 (1%)

Query: 125 IRDLCLGGKIG-TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           I D+ +GG +    L +  KM++   +PDV   N ++  L     L KA  V R M E  
Sbjct: 173 IVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYG 232

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P   TYN  +  +C+  E+ +AL L   M   G  P+ VT N+L++ L KKG L  A 
Sbjct: 233 IRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAK 292

Query: 244 KFLGEVLADDDGKATSDV--ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
             + E+      KA   V   T   L+  Y K G   +ALALW +M  + +   + ++N 
Sbjct: 293 GLIQEM-----AKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNT 347

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           ++ GFC  G +S A      MLK+  +PD+I+YNTL+   C+ G + EA      L    
Sbjct: 348 IMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRN 407

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           ++ + ++Y T+I GLC  GD+  A +    M+ + + P+   + V+++G  + G++  A 
Sbjct: 408 LSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAK 467

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
              D ML  G++ + F + A I+ E + G    AF L++EML  G  PDV TYN+ +   
Sbjct: 468 EFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGL 527

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C LG++  A +L  +M+R G  PD +TYT  +  H   G+++E  E+F  + + G     
Sbjct: 528 CKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTV 587

Query: 542 IPFRIL 547
           + + +L
Sbjct: 588 VTYTVL 593



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 180/363 (49%), Gaps = 13/363 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  ++   C  GK+  A      M++K  +PD++++N L+   C++G++ +A  ++ E+ 
Sbjct: 345 HNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELR 404

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               S N  TYN  I G CR+ +L+ AL L   M N GI P+ VT+ +LV+  CK G + 
Sbjct: 405 FRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNML 464

Query: 241 DAVKFLGEVL----ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
            A +F  E+L    A D    T+ ++          K GD  +A  L  +M  K    D+
Sbjct: 465 MAKEFFDEMLHVGLAPDQFAYTARIVGE-------LKLGDTAKAFKLQEEMLTKGFPPDV 517

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH-FYG 355
           + YNV +NG C  G++  A     +M++ G +PD +TY + ++   + G L E    FY 
Sbjct: 518 ITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYD 577

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
           +LS+ G  P  ++Y  +I    ++G +  A  + L M EK VVP    +NV+I+G+ +  
Sbjct: 578 MLSR-GQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVR 636

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            +  A      M   G+  N +T+  LI      G   +A  L  +ML   I PD  T+ 
Sbjct: 637 KMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHG 696

Query: 476 LLI 478
            L+
Sbjct: 697 ALL 699



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 139/294 (47%), Gaps = 42/294 (14%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC  G + TAL L+  MI +G  PDV+T+  LVN  CK+G++  A     EM  +
Sbjct: 417 TLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHV 476

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+   Y A I G  ++ +  KA  L   M   G  P+ +T+N+ V+ LCK G L +A
Sbjct: 477 GLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEA 536

Query: 243 VKFLGEVLADD----------------------DGK----------ATSDVITSTILMDS 270
            + L +++ D                       +G+           T  V+T T+L+ +
Sbjct: 537 GELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHA 596

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           +  NG    A+A + +M +K +  +++ YNVLINGFC    +  A  +F +M ++G  P+
Sbjct: 597 HALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPN 656

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
             TY  L+N  C  GK  EA   Y  +    + PD           C HG ++K
Sbjct: 657 KYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDS----------CTHGALLK 700



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 4/222 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G    A  L+ +M+ KG  PDV+T+N  VN LCK+G+LE+A  ++++M      P+  TY
Sbjct: 496 GDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTY 555

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
            +F+  +     L +   +F  M + G  P  VT+ +L+HA    G L  A+ +  E+  
Sbjct: 556 TSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEM-- 613

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     +VIT  +L++ + K     QA   + +M +K I  +   Y +LIN  C  G 
Sbjct: 614 -QEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGK 672

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
              A   + QML +   PD  T+  LL  L K  K+ +A  F
Sbjct: 673 WQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKV-QAVQF 713



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 1/134 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I    L G++  A+    +M +KG VP+V+T+N L+N  CK+  +++A     EM 
Sbjct: 590 YTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQ 649

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TY   I   C + +  +AL L++ M    IRP+  TH  L+  L  K    
Sbjct: 650 EKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKL-DKDYKV 708

Query: 241 DAVKFLGEVLADDD 254
            AV+F+  ++ D D
Sbjct: 709 QAVQFIESLILDGD 722


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 130/395 (32%), Positives = 219/395 (55%), Gaps = 11/395 (2%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R M++ G  P+V T+N ++  +   GDLEK    +R+M +   SPN  TYN  I   C+ 
Sbjct: 196 RDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKK 255

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSD 260
            ++ +A+ L   MA  G+  N +++N +++ LC KG + +    +GE++ +  GK    D
Sbjct: 256 KKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSE----VGELVEEMRGKGLVPD 311

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
            +T   L++ + K G+  Q L L ++M  K +  ++V Y  LIN  C  G++S A   F 
Sbjct: 312 EVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFD 371

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK---TGVAPDQISYKTIIQGLC 377
           QM  RG  P+  TY TL++  C++G ++EA   Y VLS+   +G +P  ++Y  ++ G C
Sbjct: 372 QMRVRGLRPNERTYTTLIDGFCQKGLMNEA---YKVLSEMIVSGFSPSVVTYNALVHGYC 428

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G + +A   L  M+E+ + P+   ++ +I G+ R  +L  AF +++ M+  GV  +  
Sbjct: 429 FLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTV 488

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T+++LI        + +AF L +EM+  G+ PD  TY  LI A C  G +  AL+L+DEM
Sbjct: 489 TYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEM 548

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           ++RG  PD +TY+ LI G   +   K A+ +  K+
Sbjct: 549 VQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKL 583



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 214/429 (49%), Gaps = 8/429 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG-----DLEKADHVIRE 178
           V++ L   G +  AL L     + G  P VL++N +++ L +       D + A+ V R+
Sbjct: 138 VVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRD 197

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M     SPN  TYN  I G     +L+K L     M   GI PN VT+N L+ A CKK  
Sbjct: 198 MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKK 257

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           + +A+  L  +     G   +++I+   +++     G   +   L  +M  K +  D V 
Sbjct: 258 VKEAMALLRAMAV---GGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVT 314

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           YN L+NGFC  G++        +M+ +G  P+V+TY TL+NC+CK G L  A   +  + 
Sbjct: 315 YNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMR 374

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G+ P++ +Y T+I G C  G + +A + L  M+     P    +N ++ GY   G + 
Sbjct: 375 VRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQ 434

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  I   M+  G+  +V +++ +I    R   +  AF +K+EM+  G+ PD  TY+ LI
Sbjct: 435 EAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLI 494

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C    +  A  L+ EM+RRG+ PD +TYT LI  +C  G + +A  +  ++   G  
Sbjct: 495 QGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFL 554

Query: 539 IDHIPFRIL 547
            D++ + +L
Sbjct: 555 PDNVTYSVL 563



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 221/447 (49%), Gaps = 22/447 (4%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D  +  RD   VR  +  +   +  +IR +   G +   L   RKM ++G  P+V+T+N 
Sbjct: 190 DAERVFRDM--VRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNT 247

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           L++  CK   +++A  ++R M+    + N  +YN+ I G C    + +   L   M   G
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDK 277
           + P+ VT+N LV+  CK+G L   +  L E++    GK  S +V+T T L++   K G+ 
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMV----GKGLSPNVVTYTTLINCMCKAGNL 363

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +A+ +++ M  + ++ +   Y  LI+GFC  G ++ A+    +M+  GF P V+TYN L
Sbjct: 364 SRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNAL 423

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           ++  C  G++ EA      + + G+ PD +SY T+I G C   ++ KA +    M+EK V
Sbjct: 424 VHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGV 483

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           +P+   ++ +I G      L  AF +   M+  G+  +  T+ +LI A    G +  A  
Sbjct: 484 LPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALR 543

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI---- 513
           L  EM+  G  PD  TY++LI          +A +L  ++      PD +TY  LI    
Sbjct: 544 LHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCS 603

Query: 514 -----------KGHCARGNMKEAEEVF 529
                      KG C +G M EA+ VF
Sbjct: 604 NNEFKSVEGLVKGFCMKGLMNEADRVF 630



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 216/417 (51%), Gaps = 8/417 (1%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN-----ELDKALHLFST 213
           +V  L ++G + KA  ++   +    +P   +YNA +    R +     + D A  +F  
Sbjct: 138 VVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRD 197

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  NG+ PN  T+N+++  +  +G L   + F+ ++  + +G  + +V+T   L+D+  K
Sbjct: 198 MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKM--EKEG-ISPNVVTYNTLIDASCK 254

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                +A+AL   M    +  ++++YN +ING C  G +S       +M  +G +PD +T
Sbjct: 255 KKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVT 314

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YNTL+N  CK+G L +       +   G++P+ ++Y T+I  +C  G++ +A E    M 
Sbjct: 315 YNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMR 374

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            + + P    +  +IDG+ + G ++ A+ +   M+  G S +V T+NAL+      G + 
Sbjct: 375 VRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQ 434

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  + + M+  G+ PDV +Y+ +I   C    +  A Q+ +EM+ +G+ PD +TY+ LI
Sbjct: 435 EAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLI 494

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +G C +  + EA ++F ++   GL  D + +  L   Y    E  KA  +H + + R
Sbjct: 495 QGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQR 551



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 215/455 (47%), Gaps = 18/455 (3%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C   K+  A+ L R M   G   +++++N ++N LC  G + +   ++ EM      P+ 
Sbjct: 253 CKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDE 312

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN  + G+C+   L + L L S M   G+ PN VT+  L++ +CK G L  AV+   +
Sbjct: 313 VTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQ 372

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +          +  T T L+D + + G   +A  + ++M        +V YN L++G+C 
Sbjct: 373 MRVRG---LRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCF 429

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G +  A      M++RG  PDV++Y+T++   C++ +L +A      + + GV PD ++
Sbjct: 430 LGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVT 489

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y ++IQGLC+   +V+A +    M+ + + P+   +  +I+ Y   G+LS A  + D M+
Sbjct: 490 YSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMV 549

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI---------- 478
             G   +  T++ LI    +      A  L  ++  +   PD  TYN LI          
Sbjct: 550 QRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKS 609

Query: 479 -----GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
                   C  G ++ A +++  ML+R   P+   Y  +I GH   GN+ +A  ++ +++
Sbjct: 610 VEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELE 669

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
               A   +    L K   R   +D+   + Q  L
Sbjct: 670 HSSFACHTVAVIALVKALAREGMNDELSRLLQNIL 704



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 127/244 (52%), Gaps = 5/244 (2%)

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK-----LDEASHF 353
           +++++      G +  A        + GF P V++YN +L+ L ++        D+A   
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERV 194

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  + + GV+P+  +Y  II+G+   GD+ K   F+  M ++ + P    +N +ID   +
Sbjct: 195 FRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCK 254

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              +  A ++   M   GV++N+ ++N++I      G + +   L +EM   G+ PD  T
Sbjct: 255 KKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVT 314

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN L+   C  G++H  L L  EM+ +G++P+++TYT LI   C  GN+  A E+F +++
Sbjct: 315 YNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMR 374

Query: 534 TLGL 537
             GL
Sbjct: 375 VRGL 378



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 165/386 (42%), Gaps = 54/386 (13%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           NL R   + D   VR  L  + R +  +I   C  G +  A  +  +MI  G  P V+T+
Sbjct: 362 NLSRAVEIFDQMRVR-GLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTY 420

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N LV+  C +G +++A  ++R M E    P+  +Y+  I G+CR  EL KA  +   M  
Sbjct: 421 NALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVE 480

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G+ P+ VT++ L+  LC +  L +A     E++         D +T T L+++Y  +G+
Sbjct: 481 KGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRG---LPPDEVTYTSLINAYCVDGE 537

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLING------------------------------- 305
             +AL L ++M Q+    D V Y+VLING                               
Sbjct: 538 LSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNT 597

Query: 306 -------------------FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
                              FC+ G ++ A   F  ML+R   P+   YN +++   + G 
Sbjct: 598 LIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGN 657

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           + +A + Y  L  +  A   ++   +++ L   G   +    L ++L    + +  +  V
Sbjct: 658 VHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKV 717

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGV 432
           +++   + G++    ++   M   G+
Sbjct: 718 LVEVNFKEGNMDAVLNVLTEMAKDGL 743



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 138/310 (44%), Gaps = 16/310 (5%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
           G V   L  D   +  VI   C   ++G A  ++ +M++KG +PD +T++ L+  LC   
Sbjct: 442 GMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQ 501

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
            L +A  + REM      P+  TY + I  YC   EL KAL L   M   G  P+ VT++
Sbjct: 502 KLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYS 561

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI--------------LMDSYFK 273
           +L++ L KK     A + L ++  ++      DV  +T+              L+  +  
Sbjct: 562 VLINGLNKKARTKVAKRLLLKLFYEES--VPDDVTYNTLIENCSNNEFKSVEGLVKGFCM 619

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +A  ++  M Q+N + +   YN++I+G    G++  A+  + ++    F    + 
Sbjct: 620 KGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVA 679

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
              L+  L ++G  DE S     + ++    D    K +++     G++      L  M 
Sbjct: 680 VIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMA 739

Query: 394 EKSVVPEPHI 403
           +  ++P+  I
Sbjct: 740 KDGLLPDGGI 749


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 217/425 (51%), Gaps = 3/425 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LCL G++  AL L  +M++ G  PD +T+  ++N LCK G+   A  + R+M E 
Sbjct: 209 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 268

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +   Y+  I   C+    D AL LF+ M   GI+ + VT++ L+  LC  G   D 
Sbjct: 269 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 328

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K L E++  +      DV+T + L+D + K G   +A  L+N+M  + I  D + YN L
Sbjct: 329 AKMLREMIGRN---IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 385

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC    +  A   F  M+ +G  PD++TY+ L+N  CK  ++D+    +  +S  G+
Sbjct: 386 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 445

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ I+Y T++ G C  G +  A+E    M+ + V P    + +++DG    G+L+ A  
Sbjct: 446 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 505

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I + M    ++  +  +N +I        + DA+SL   +   G+ PDV TYN++IG  C
Sbjct: 506 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 565

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +  A  L+ +M   G TPD  TY  LI+ H     +  + E+  +++  G + D  
Sbjct: 566 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSS 625

Query: 543 PFRIL 547
             +++
Sbjct: 626 TIKMV 630



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 229/469 (48%), Gaps = 38/469 (8%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D      +I   C   K+  A  +  +  + G  PD +T + LVN  C  G + +A 
Sbjct: 130 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 189

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++  M EM+  P+  T +  I G C    + +AL L   M   G +P+ VT+  +++ L
Sbjct: 190 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 249

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G    A+    ++   ++    + V+  +I++DS  K+G    AL+L+N+M  K I+
Sbjct: 250 CKSGNSALALDLFRKM---EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 306

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+V Y+ LI G C +G          +M+ R  +PDV+T++ L++   K+GKL EA   
Sbjct: 307 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 366

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  +   G+APD I+Y ++I G C    + +A +    M+ K   P+   ++++I+ Y +
Sbjct: 367 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 426

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              + +   +   + S G+  N  T+N L+L   + G +  A  L +EM+  G+ P V T
Sbjct: 427 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 486

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLR---------------------------------- 499
           Y +L+   C+ G ++ AL+++++M +                                  
Sbjct: 487 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 546

Query: 500 -RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +G+ PD++TY  +I G C +G++ EA+ +F K++  G   D   + IL
Sbjct: 547 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 595



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 234/461 (50%), Gaps = 20/461 (4%)

Query: 90  LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIR----DLCLGGKIGTALWLRRKMI 145
           +D+ + + +D  ++M  + P+   ++ + R   AV R    DL LG   G  L       
Sbjct: 76  VDIKVNDAIDLFESMIQSRPLPTPIDFN-RLCSAVARTKQYDLVLGFCKGMEL------- 127

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
             G   D+ T   ++N  C+   L  A  V+    ++   P+  T++  + G+C    + 
Sbjct: 128 -NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS 186

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +A+ L   M     RP+ VT + L++ LC KG + +A+  +  ++   +     D +T  
Sbjct: 187 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV---EYGFQPDEVTYG 243

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            +++   K+G+   AL L+  M ++NI+  +V Y+++I+  C +G    A + F +M  +
Sbjct: 244 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 303

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G   DV+TY++L+  LC  GK D+ +     +    + PD +++  +I      G +++A
Sbjct: 304 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 363

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           +E    M+ + + P+   +N +IDG+ +   L  A  + DLM+S G   ++ T++ LI +
Sbjct: 364 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 423

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             +   + D   L +E+   G+ P+  TYN L+   C  G ++ A +L+ EM+ RG+ P 
Sbjct: 424 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 483

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQ----TLGLAIDHI 542
           ++TY  L+ G C  G + +A E+F K+Q    TLG+ I +I
Sbjct: 484 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 524



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 186/373 (49%), Gaps = 7/373 (1%)

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +++ A+ LF +M  +   P  +  N L  A+ +     D V  LG     +      D+ 
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQY-DLV--LGFCKGMELNGIEHDMY 135

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T TI+++ Y +      A ++    ++   + D + ++ L+NGFCL G +S A A   +M
Sbjct: 136 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 195

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           ++    PD++T +TL+N LC +G++ EA      + + G  PD+++Y  ++  LC  G+ 
Sbjct: 196 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 255

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A +    M E+++      ++++ID   + G   +A S+ + M   G+ ++V T+++L
Sbjct: 256 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 315

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I      G   D   + +EM+   I PDV T++ LI      G +  A +LY+EM+ RGI
Sbjct: 316 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 375

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA-- 560
            PD ITY  LI G C    + EA ++F  + + G   D + + IL   Y + K  D    
Sbjct: 376 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 435

Query: 561 --RDIHQKWLLRN 571
             R+I  K L+ N
Sbjct: 436 LFREISSKGLIPN 448



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 4/236 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   +  +I   C   ++   + L R++  KG +P+ +T+N LV   C+ G L  A  
Sbjct: 411 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 470

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           + +EM      P+  TY   + G C   EL+KAL +F  M  + +      +NI++H +C
Sbjct: 471 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 530

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
               + DA      +    D     DV+T  +++    K G   +A  L+  M +     
Sbjct: 531 NASKVDDAWSLFCSL---SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 587

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
           D   YN+LI        + S+     +M   GF  D  T   +++ L  + +LD++
Sbjct: 588 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR-RLDKS 642


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/383 (35%), Positives = 208/383 (54%), Gaps = 3/383 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  AL L+ +M+ KG  P V T+N  +  LCK+G +  A   + +M      P+  +Y
Sbjct: 318 GMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSY 377

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYCR+  L KA  LF  + +  + P  VT+N L+  LC++G L  A +   E++ 
Sbjct: 378 NTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI- 436

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            ++G A  D++T TIL++   K G    A   +++M  + ++ D  AY   I G    GD
Sbjct: 437 -NEGIA-PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGD 494

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
            S AF+   +ML +GF PD+I YN +++ LCK G L+EAS     +   GV PD ++Y +
Sbjct: 495 TSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           II     +G + K RE    ML K + P    + V+I G+   G L  AF     M   G
Sbjct: 555 IIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKG 614

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  NV T+N+LI    +   +  A++   EM+  GIFP+ ++Y +LI  +CN+G+   AL
Sbjct: 615 ILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEAL 674

Query: 492 QLYDEMLRRGITPDIITYTELIK 514
            LY +ML RG+ PD  T++ L+K
Sbjct: 675 SLYKQMLDRGVQPDSCTHSALLK 697



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 234/441 (53%), Gaps = 6/441 (1%)

Query: 120 RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
           R + ++RD  L  K   A+ + R M + G  P ++T+N L++  CK G +++   ++ EM
Sbjct: 204 RILRILRDKDLMSK---AVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEM 260

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
                +PN  TYN  I G  +  E ++A  L   M   G++ +  T+N L++    KG+L
Sbjct: 261 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGML 320

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +A+    E++      A+  V T    +    K G    A+   +DM   N+  D+V+Y
Sbjct: 321 AEALSLQEEMVLKG---ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSY 377

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N LI G+C  G++  AF  F ++      P ++TYNTLL+ LC+QG+L+ A      +  
Sbjct: 378 NTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMIN 437

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+APD ++Y  ++ G C  G +  A+EF   ML + +  + + +   I G  + GD S 
Sbjct: 438 EGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSR 497

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AFS+++ ML+ G   ++  +N ++    + G++ +A  L ++M+ DG+ PD  TY  +I 
Sbjct: 498 AFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIH 557

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           A    G +    +++ EML +G+TP ++TYT LI GH  +G ++ A   F+++Q  G+  
Sbjct: 558 AHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILP 617

Query: 540 DHIPFRILKKRYRRMKESDKA 560
           + I +  L     +++  D+A
Sbjct: 618 NVITYNSLINGLCKVRRMDQA 638



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/478 (30%), Positives = 238/478 (49%), Gaps = 8/478 (1%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           ++ + ++  +TM + G ++ T+ T    +  ++   C GGK+   L L  +M ++G  P+
Sbjct: 214 LMSKAVEVYRTMGEFG-IKPTIVT----YNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPN 268

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
            +T+N L+N L K G+ E+A  +I EM +     +  TYN  I GY     L +AL L  
Sbjct: 269 DVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQE 328

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M   G  P   T+N  ++ LCK G + DA++ L ++LA++      DV++   L+  Y 
Sbjct: 329 EMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN---LLPDVVSYNTLIYGYC 385

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           + G+  +A  L++++    +   IV YN L++G C  G++  A     +M+  G  PD++
Sbjct: 386 RLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 445

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TY  L+N  CK G L  A  F+  +   G+  D  +Y T I G    GD  +A      M
Sbjct: 446 TYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEM 505

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           L K   P+  I+NV++DG  + G+L  A  +   M+S GV  +  T+ ++I A    G +
Sbjct: 506 LAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRL 565

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
                +  EML  G+ P V TY +LI      G +  A   + EM  +GI P++ITY  L
Sbjct: 566 RKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSL 625

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           I G C    M +A   FA++   G+  +   + IL      M    +A  ++++ L R
Sbjct: 626 INGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDR 683



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 188/406 (46%), Gaps = 38/406 (9%)

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
           Y + + +++ L +F  M  + + P+    N ++  L  K L+  AV+     + +   K 
Sbjct: 174 YSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY-RTMGEFGIKP 232

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
           T  ++T   L+DSY K G   Q L L ++M ++    + V YNVLING    G+   A  
Sbjct: 233 T--IVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKG 290

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
              +MLK G      TYN L+     +G L EA      +   G +P   +Y + I GLC
Sbjct: 291 LIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLC 350

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G +  A + L  ML  +++P+   +N +I GY R G+L  AF + D + S  +   + 
Sbjct: 351 KLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIV 410

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T+N L+    R G +  A  LK EM+ +GI PD+ TY +L+  SC +G + +A + +DEM
Sbjct: 411 TYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEM 470

Query: 498 LR-----------------------------------RGITPDIITYTELIKGHCARGNM 522
           L                                    +G  PD+I Y  ++ G C  GN+
Sbjct: 471 LHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNL 530

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +EA E+  K+ + G+  D++ +  +   +       K R+I  + L
Sbjct: 531 EEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEML 576



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 152/286 (53%), Gaps = 3/286 (1%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  G++  A  L+ +MI +G  PD++T+  LVN  CK+G L  A     EM       +
Sbjct: 419 LCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELD 478

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
              Y   I G  ++ +  +A  L   M   G  P+ + +N++V  LCK G L +A + L 
Sbjct: 479 SYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQ 538

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           ++++D       D +T T ++ ++ +NG   +   ++ +M  K +   +V Y VLI+G  
Sbjct: 539 KMVSDG---VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHA 595

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G +  AF YF +M ++G LP+VITYN+L+N LCK  ++D+A +F+  + + G+ P++ 
Sbjct: 596 GKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKY 655

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           SY  +I   C  G+  +A      ML++ V P+    + ++   G+
Sbjct: 656 SYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 130/264 (49%)

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           ++LI  +     +    + F +M+K    PDV   N +L  L  +  + +A   Y  + +
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ P  ++Y T++   C  G + +  + L  M  +   P    +NV+I+G  + G+   
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 287

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +   ML  G+  + +T+N LI      G + +A SL++EM+L G  P V TYN  I 
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C LG +  A+Q   +ML   + PD+++Y  LI G+C  GN+ +A  +F +++++ L  
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 407

Query: 540 DHIPFRILKKRYRRMKESDKARDI 563
             + +  L     R  E + A+ +
Sbjct: 408 TIVTYNTLLDGLCRQGELEVAQQL 431



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 122/240 (50%), Gaps = 6/240 (2%)

Query: 114 LETD-YRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           LE D Y     ++ +L LG     A  L+ +M+ KG  PD++ +N +V+ LCK+G+LE+A
Sbjct: 475 LELDSYAYATRIVGELKLG-DTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEA 533

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             ++++M      P+  TY + I  +     L K   +F  M + G+ P+ VT+ +L+H 
Sbjct: 534 SELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHG 593

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
              KG L  A  +  E+    +     +VIT   L++   K     QA   + +M +K I
Sbjct: 594 HAGKGRLERAFIYFSEM---QEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGI 650

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             +  +Y +LIN  C  G+   A + + QML RG  PD  T++ LL  L K  KL +A H
Sbjct: 651 FPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKL-QAVH 709


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/383 (35%), Positives = 208/383 (54%), Gaps = 3/383 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  AL L+ +M+ KG  P V T+N  +  LCK+G +  A   + +M      P+  +Y
Sbjct: 318 GMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSY 377

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYCR+  L KA  LF  + +  + P  VT+N L+  LC++G L  A +   E++ 
Sbjct: 378 NTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI- 436

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            ++G A  D++T TIL++   K G    A   +++M  + ++ D  AY   I G    GD
Sbjct: 437 -NEGIA-PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGD 494

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
            S AF+   +ML +GF PD+I YN +++ LCK G L+EAS     +   GV PD ++Y +
Sbjct: 495 TSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           II     +G + K RE    ML K + P    + V+I G+   G L  AF     M   G
Sbjct: 555 IIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKG 614

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  NV T+N+LI    +   +  A++   EM+  GIFP+ ++Y +LI  +CN+G+   AL
Sbjct: 615 ILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEAL 674

Query: 492 QLYDEMLRRGITPDIITYTELIK 514
            LY +ML RG+ PD  T++ L+K
Sbjct: 675 SLYKQMLDRGVQPDSCTHSALLK 697



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 234/441 (53%), Gaps = 6/441 (1%)

Query: 120 RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
           R + ++RD  L  K   A+ + R M + G  P ++T+N L++  CK G +++   ++ EM
Sbjct: 204 RILRILRDKDLMSK---AVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEM 260

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
                +PN  TYN  I G  +  E ++A  L   M   G++ +  T+N L++    KG+L
Sbjct: 261 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGML 320

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +A+    E++      A+  V T    +    K G    A+   +DM   N+  D+V+Y
Sbjct: 321 AEALSLQEEMVLKG---ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSY 377

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N LI G+C  G++  AF  F ++      P ++TYNTLL+ LC+QG+L+ A      +  
Sbjct: 378 NTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMIN 437

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+APD ++Y  ++ G C  G +  A+EF   ML + +  + + +   I G  + GD S 
Sbjct: 438 EGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSR 497

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AFS+++ ML+ G   ++  +N ++    + G++ +A  L ++M+ DG+ PD  TY  +I 
Sbjct: 498 AFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIH 557

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           A    G +    +++ EML +G+TP ++TYT LI GH  +G ++ A   F+++Q  G+  
Sbjct: 558 AHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILP 617

Query: 540 DHIPFRILKKRYRRMKESDKA 560
           + I +  L     +++  D+A
Sbjct: 618 NVITYNSLINGLCKVRRMDQA 638



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/478 (30%), Positives = 238/478 (49%), Gaps = 8/478 (1%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           ++ + ++  +TM + G ++ T+ T    +  ++   C GGK+   L L  +M ++G  P+
Sbjct: 214 LMSKAVEVYRTMGEFG-IKPTIVT----YNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPN 268

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
            +T+N L+N L K G+ E+A  +I EM +     +  TYN  I GY     L +AL L  
Sbjct: 269 DVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQE 328

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M   G  P   T+N  ++ LCK G + DA++ L ++LA++      DV++   L+  Y 
Sbjct: 329 EMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN---LLPDVVSYNTLIYGYC 385

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           + G+  +A  L++++    +   IV YN L++G C  G++  A     +M+  G  PD++
Sbjct: 386 RLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 445

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TY  L+N  CK G L  A  F+  +   G+  D  +Y T I G    GD  +A      M
Sbjct: 446 TYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEM 505

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           L K   P+  I+NV++DG  + G+L  A  +   M+S GV  +  T+ ++I A    G +
Sbjct: 506 LAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRL 565

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
                +  EML  G+ P V TY +LI      G +  A   + EM  +GI P++ITY  L
Sbjct: 566 RKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSL 625

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           I G C    M +A   FA++   G+  +   + IL      M    +A  ++++ L R
Sbjct: 626 INGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDR 683



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 188/406 (46%), Gaps = 38/406 (9%)

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
           Y + + +++ L +F  M  + + P+    N ++  L  K L+  AV+     + +   K 
Sbjct: 174 YSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY-RTMGEFGIKP 232

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
           T  ++T   L+DSY K G   Q L L ++M ++    + V YNVLING    G+   A  
Sbjct: 233 T--IVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKG 290

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
              +MLK G      TYN L+     +G L EA      +   G +P   +Y + I GLC
Sbjct: 291 LIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLC 350

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G +  A + L  ML  +++P+   +N +I GY R G+L  AF + D + S  +   + 
Sbjct: 351 KLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIV 410

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T+N L+    R G +  A  LK EM+ +GI PD+ TY +L+  SC +G + +A + +DEM
Sbjct: 411 TYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEM 470

Query: 498 LR-----------------------------------RGITPDIITYTELIKGHCARGNM 522
           L                                    +G  PD+I Y  ++ G C  GN+
Sbjct: 471 LHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNL 530

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +EA E+  K+ + G+  D++ +  +   +       K R+I  + L
Sbjct: 531 EEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEML 576



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 152/286 (53%), Gaps = 3/286 (1%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  G++  A  L+ +MI +G  PD++T+  LVN  CK+G L  A     EM       +
Sbjct: 419 LCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELD 478

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
              Y   I G  ++ +  +A  L   M   G  P+ + +N++V  LCK G L +A + L 
Sbjct: 479 SYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQ 538

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           ++++D       D +T T ++ ++ +NG   +   ++ +M  K +   +V Y VLI+G  
Sbjct: 539 KMVSDG---VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHA 595

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G +  AF YF +M ++G LP+VITYN+L+N LCK  ++D+A +F+  + + G+ P++ 
Sbjct: 596 GKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKY 655

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           SY  +I   C  G+  +A      ML++ V P+    + ++   G+
Sbjct: 656 SYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 130/264 (49%)

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           ++LI  +     +    + F +M+K    PDV   N +L  L  +  + +A   Y  + +
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ P  ++Y T++   C  G + +  + L  M  +   P    +NV+I+G  + G+   
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 287

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +   ML  G+  + +T+N LI      G + +A SL++EM+L G  P V TYN  I 
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C LG +  A+Q   +ML   + PD+++Y  LI G+C  GN+ +A  +F +++++ L  
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 407

Query: 540 DHIPFRILKKRYRRMKESDKARDI 563
             + +  L     R  E + A+ +
Sbjct: 408 TIVTYNTLLDGLCRQGELEVAQQL 431



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 121/245 (49%), Gaps = 5/245 (2%)

Query: 114 LETD-YRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           LE D Y     ++ +L LG     A  L+ +M+ KG  PD++ +N +V+ LCK+G+LE+A
Sbjct: 475 LELDSYAYATRIVGELKLG-DTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEA 533

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             ++++M      P+  TY + I  +     L K   +F  M + G+ P+ VT+ +L+H 
Sbjct: 534 SELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHG 593

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
              KG L  A  +  E+    +     +VIT   L++   K     QA   + +M +K I
Sbjct: 594 HAGKGRLERAFIYFSEM---QEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGI 650

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             +  +Y +LIN  C  G+   A + + QML RG  PD  T++ LL  L K  KL     
Sbjct: 651 FPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQ 710

Query: 353 FYGVL 357
              +L
Sbjct: 711 LESLL 715


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 236/462 (51%), Gaps = 4/462 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           RC    D   H  ++      G    A+ L   M+ KG  P ++T+N ++  LC+ G  +
Sbjct: 124 RCVF-PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWD 182

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           KA  V +EM +   +P+  ++   I G+CRV E+++AL ++  M + GI+P+ V+ + L+
Sbjct: 183 KAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI 242

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
               ++G +  A+ +L E+          D +  T+++  + + G    AL + ++M   
Sbjct: 243 GLFARRGKMDHAMAYLREMRC---FGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC 299

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
               D+V YN L+NG C    +  A     +M +RG  PD+ T+ TL++  C +GKLD+A
Sbjct: 300 GCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKA 359

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +  +    + PD ++Y T+I G+C  GD+ KA +    M  + + P    ++++ID 
Sbjct: 360 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS 419

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           +   G + +AF   D M++ G+  N+ T+N++I    R G++       ++M+++ + PD
Sbjct: 420 HCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 479

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           + TYN LI        +H A +L + M +  + PD++TY  LI G    GN++EA  +F 
Sbjct: 480 LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE 539

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           K+   G+  D   +  +   +     S +A  +H + L R K
Sbjct: 540 KMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGK 581



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 177/329 (53%), Gaps = 9/329 (2%)

Query: 222 NRVTHNILVHALCKKGLLGDAVKF--LGEVLADDDGKAT-SDVITSTILMDSYFKNGDKF 278
           N  T NI+VH  CK      A++F  +  V+++ + +    DV+T  +++D+ F+ GD  
Sbjct: 94  NTYTLNIMVHNYCK------ALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAE 147

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
            A+AL + M  K ++  IV YN ++ G C +G    A+  F +M   G  PDV ++  L+
Sbjct: 148 AAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILI 207

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
              C+ G+++EA   Y  +   G+ PD +S+  +I      G +  A  +L  M    +V
Sbjct: 208 GGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLV 267

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P+  I+ ++I G+ R G +S+A  +RD M+  G   +V T+N L+    +   + DA  L
Sbjct: 268 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 327

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
             EM   G+ PD+ T+  LI   C  G +  ALQL+D ML + + PDI+TY  LI G C 
Sbjct: 328 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 387

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +G++ +A +++  + +  +  +H+ + IL
Sbjct: 388 QGDLDKANDLWDDMHSREIFPNHVTYSIL 416



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 159/309 (51%), Gaps = 2/309 (0%)

Query: 257 ATSDVITST--ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           + S+V T T  I++ +Y K  +  +  A+ ++M ++ +  D+V +NV+++     GD  +
Sbjct: 89  SNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEA 148

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A A    M+ +G  P ++TYN++L  LC+ G  D+A   +  +   GVAPD  S+  +I 
Sbjct: 149 AMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 208

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C  G+I +A +    M  + + P+   ++ +I  + R G + +A +    M  FG+  
Sbjct: 209 GFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 268

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +   +  +I    R G + DA  ++ EM+  G  PDV TYN L+   C    +  A  L 
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           +EM  RG+ PD+ T+T LI G+C  G + +A ++F  +    L  D + +  L     R 
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 388

Query: 555 KESDKARDI 563
            + DKA D+
Sbjct: 389 GDLDKANDL 397



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 134/274 (48%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           +F  N + +    N++++ +C   +     A   +M KR   PDV+T+N +++   + G 
Sbjct: 86  VFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGD 145

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
            + A      +   G+ P  ++Y ++++GLC  G   KA E    M +  V P+   + +
Sbjct: 146 AEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTI 205

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +I G+ R G++  A  I   M   G+  ++ +F+ LI    R G +  A +  +EM   G
Sbjct: 206 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 265

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           + PD   Y ++IG  C  G +  AL++ DEM+  G  PD++TY  L+ G C    + +AE
Sbjct: 266 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 325

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            +  +++  G+  D   F  L   Y    + DKA
Sbjct: 326 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKA 359



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 35/216 (16%)

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV------------- 432
           RE + S+L  S  P+P +++++I  Y +      AF    L+L   V             
Sbjct: 10  REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA 69

Query: 433 ----------------------SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
                                   N +T N ++    +        ++  EM    +FPD
Sbjct: 70  LSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 129

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V T+N+++ A    G    A+ L D M+ +G+ P I+TY  ++KG C  G   +A EVF 
Sbjct: 130 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK 189

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           ++   G+A D   F IL   + R+ E ++A  I+++
Sbjct: 190 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKE 225



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 41/96 (42%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K+  A  L   M ++   PDV+T+N L+N     G++++A  +  +M      P+  TY 
Sbjct: 495 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 554

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           + I G+       +A  L   M   G    R    +
Sbjct: 555 SMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAAGTV 590


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 217/425 (51%), Gaps = 3/425 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LCL G++  AL L  +M++ G  PD +T+  ++N LCK G+   A  + R+M E 
Sbjct: 180 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 239

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +   Y+  I   C+    D AL LF+ M   GI+ + VT++ L+  LC  G   D 
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 299

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K L E++  +      DV+T + L+D + K G   +A  L+N+M  + I  D + YN L
Sbjct: 300 AKMLREMIGRN---IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC    +  A   F  M+ +G  PD++TY+ L+N  CK  ++D+    +  +S  G+
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ I+Y T++ G C  G +  A+E    M+ + V P    + +++DG    G+L+ A  
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I + M    ++  +  +N +I        + DA+SL   +   G+ PDV TYN++IG  C
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +  A  L+ +M   G TPD  TY  LI+ H     +  + E+  +++  G + D  
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSS 596

Query: 543 PFRIL 547
             +++
Sbjct: 597 TIKMV 601



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 229/469 (48%), Gaps = 38/469 (8%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D      +I   C   K+  A  +  +  + G  PD +T + LVN  C  G + +A 
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++  M EM+  P+  T +  I G C    + +AL L   M   G +P+ VT+  +++ L
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G    A+    ++   ++    + V+  +I++DS  K+G    AL+L+N+M  K I+
Sbjct: 221 CKSGNSALALDLFRKM---EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+V Y+ LI G C +G          +M+ R  +PDV+T++ L++   K+GKL EA   
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  +   G+APD I+Y ++I G C    + +A +    M+ K   P+   ++++I+ Y +
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              + +   +   + S G+  N  T+N L+L   + G +  A  L +EM+  G+ P V T
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLR---------------------------------- 499
           Y +L+   C+ G ++ AL+++++M +                                  
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 517

Query: 500 -RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +G+ PD++TY  +I G C +G++ EA+ +F K++  G   D   + IL
Sbjct: 518 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 234/461 (50%), Gaps = 20/461 (4%)

Query: 90  LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIR----DLCLGGKIGTALWLRRKMI 145
           +D+ + + +D  ++M  + P+   ++ + R   AV R    DL LG   G  L       
Sbjct: 47  VDIKVNDAIDLFESMIQSRPLPTPIDFN-RLCSAVARTKQYDLVLGFCKGMEL------- 98

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
             G   D+ T   ++N  C+   L  A  V+    ++   P+  T++  + G+C    + 
Sbjct: 99  -NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS 157

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +A+ L   M     RP+ VT + L++ LC KG + +A+  +  ++   +     D +T  
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV---EYGFQPDEVTYG 214

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            +++   K+G+   AL L+  M ++NI+  +V Y+++I+  C +G    A + F +M  +
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G   DV+TY++L+  LC  GK D+ +     +    + PD +++  +I      G +++A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           +E    M+ + + P+   +N +IDG+ +   L  A  + DLM+S G   ++ T++ LI +
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             +   + D   L +E+   G+ P+  TYN L+   C  G ++ A +L+ EM+ RG+ P 
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQ----TLGLAIDHI 542
           ++TY  L+ G C  G + +A E+F K+Q    TLG+ I +I
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 186/373 (49%), Gaps = 7/373 (1%)

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +++ A+ LF +M  +   P  +  N L  A+ +     D V  LG     +      D+ 
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQY-DLV--LGFCKGMELNGIEHDMY 106

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T TI+++ Y +      A ++    ++   + D + ++ L+NGFCL G +S A A   +M
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           ++    PD++T +TL+N LC +G++ EA      + + G  PD+++Y  ++  LC  G+ 
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A +    M E+++      ++++ID   + G   +A S+ + M   G+ ++V T+++L
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I      G   D   + +EM+   I PDV T++ LI      G +  A +LY+EM+ RGI
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA-- 560
            PD ITY  LI G C    + EA ++F  + + G   D + + IL   Y + K  D    
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406

Query: 561 --RDIHQKWLLRN 571
             R+I  K L+ N
Sbjct: 407 LFREISSKGLIPN 419



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 4/236 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   +  +I   C   ++   + L R++  KG +P+ +T+N LV   C+ G L  A  
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           + +EM      P+  TY   + G C   EL+KAL +F  M  + +      +NI++H +C
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
               + DA      +    D     DV+T  +++    K G   +A  L+  M +     
Sbjct: 502 NASKVDDAWSLFCSL---SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
           D   YN+LI        + S+     +M   GF  D  T   +++ L  + +LD++
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR-RLDKS 613


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 228/454 (50%), Gaps = 3/454 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I   C  G +  A  L   M  KG  P V T+N ++N LCK G   +A  V+
Sbjct: 392 DVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVL 451

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM ++  SP+ ATYN  +   CR + +  A  +F  M + G+ P+ V+ + L+  L K 
Sbjct: 452 DEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 511

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A+K+  ++   + G A  +VI  TIL+  + +NG   +AL + ++M ++    D+
Sbjct: 512 GCLDQALKYFRDM--KNAGLAPDNVIY-TILIGGFCRNGVMSEALKVRDEMLEQGCXLDV 568

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YN ++NG C    +S A   F +M +RG  PD  T+ TL+N   K G +++A   + +
Sbjct: 569 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEM 628

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + +  + PD ++Y T+I G C   ++ K  E    M+ + + P    + ++I+GY   G 
Sbjct: 629 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 688

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +S AF + D M+  G  + + T N ++    R G+   A      MLL GI PD  TYN 
Sbjct: 689 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 748

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI       ++  A  L ++M   G+ PD+ITY  ++ G   +G M+EAE +  K+   G
Sbjct: 749 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 808

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +  D   +  L   +       +A  +H + L R
Sbjct: 809 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 842



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 217/429 (50%), Gaps = 3/429 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A  + +++++ G   +V T N ++N LCK   +E     + +M E    P+  TY
Sbjct: 337 GWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTY 396

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I  YCR   L++A  L  +M+  G++P   T+N +++ LCK G    A   L E+L 
Sbjct: 397 NTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK 456

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                 + D  T  IL+    +N +   A  ++++M  + +  D+V+++ LI     NG 
Sbjct: 457 IG---MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 513

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A  YF  M   G  PD + Y  L+   C+ G + EA      + + G   D ++Y T
Sbjct: 514 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNT 573

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           I+ GLC    + +A E    M E+ V P+ + +  +I+GY + G+++ A ++ ++M+   
Sbjct: 574 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRN 633

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  +V T+N LI    +G  +     L  +M+   I+P+  +Y +LI   CN+G +  A 
Sbjct: 634 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 693

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +L+DEM+ +G    IIT   ++KG+C  GN  +A+E  + +   G+  D I +  L   +
Sbjct: 694 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 753

Query: 552 RRMKESDKA 560
            + +  D+A
Sbjct: 754 IKEENMDRA 762



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 222/448 (49%), Gaps = 8/448 (1%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +L+E  + + +M   G   C    +     A+I  LC  GK   A  +  +M++ G  PD
Sbjct: 408 LLEEAFELMDSMSGKGLKPCVFTYN-----AIINGLCKTGKYLRAKGVLDEMLKIGMSPD 462

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
             T+N L+ E C+  ++  A+ +  EM      P+  +++A I    +   LD+AL  F 
Sbjct: 463 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 522

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M N G+ P+ V + IL+   C+ G++ +A+K   E+L   +     DV+T   +++   
Sbjct: 523 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEML---EQGCXLDVVTYNTILNGLC 579

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K     +A  L+ +M ++ +  D   +  LING+  +G+++ A   F  M++R   PDV+
Sbjct: 580 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVV 639

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TYNTL++  CK  ++++ +  +  +    + P+ ISY  +I G C  G + +A      M
Sbjct: 640 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 699

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +EK         N I+ GY R G+   A      ML  G+  +  T+N LI    +  ++
Sbjct: 700 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 759

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             AF+L  +M   G+ PDV TYN+++      G +  A  +  +M+ RG+ PD  TYT L
Sbjct: 760 DRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 819

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAID 540
           I GH  + N+KEA  V  ++   G   D
Sbjct: 820 INGHVTQNNLKEAFRVHDEMLQRGFVPD 847



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 187/363 (51%), Gaps = 3/363 (0%)

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N+ + G  +V  +D A  ++  +  +G++ N  T NI+++ALCK   + +   FL ++  
Sbjct: 327 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDM-- 384

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            ++     DV+T   L+++Y + G   +A  L + M  K ++  +  YN +ING C  G 
Sbjct: 385 -EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 443

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A     +MLK G  PD  TYN LL   C+   + +A   +  +   GV PD +S+  
Sbjct: 444 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 503

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I  L  +G + +A ++   M    + P+  I+ ++I G+ R G +S A  +RD ML  G
Sbjct: 504 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 563

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              +V T+N ++    +   + +A  L  EM   G+FPD +T+  LI      G+++ A+
Sbjct: 564 CXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAV 623

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            L++ M++R + PD++TY  LI G C    M++  E++  + +  +  +HI + IL   Y
Sbjct: 624 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 683

Query: 552 RRM 554
             M
Sbjct: 684 CNM 686



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 155/292 (53%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  ++ ++ +  +Q ++   N++IN  C N  I +  ++   M ++G  PDV+TYNTL+N
Sbjct: 342 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLIN 401

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C+QG L+EA      +S  G+ P   +Y  II GLC  G  ++A+  L  ML+  + P
Sbjct: 402 AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSP 461

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   +N+++    R  ++ +A  I D M S GV  ++ +F+ALI   ++ G +  A    
Sbjct: 462 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 521

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           ++M   G+ PD   Y +LIG  C  G +  AL++ DEML +G   D++TY  ++ G C  
Sbjct: 522 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKE 581

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             + EA+E+F ++   G+  D   F  L   Y +    +KA  + +  + RN
Sbjct: 582 KMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRN 633



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/196 (19%), Positives = 79/196 (40%), Gaps = 18/196 (9%)

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           S+  +I  L     +  A+  +L M+ KS V    I   ++  YG CG            
Sbjct: 238 SFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCG------------ 285

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
                 SN   F+ L+    +   + +     + +   G+   +   N L+G    +G +
Sbjct: 286 ------SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWV 339

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            LA ++Y E++R G+  ++ T   +I   C    ++  +   + ++  G+  D + +  L
Sbjct: 340 DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL 399

Query: 548 KKRYRRMKESDKARDI 563
              Y R    ++A ++
Sbjct: 400 INAYCRQGLLEEAFEL 415


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 140/453 (30%), Positives = 228/453 (50%), Gaps = 29/453 (6%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V++ LC+  ++  A  L R M + G VP+ + +  L++ L K   +++A  ++ EM  M 
Sbjct: 216 VMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMG 275

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T+N  I G+CR+N + +   L   M   G  PN +T+  L+H LCK   + +A 
Sbjct: 276 CPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQ 335

Query: 244 KFLGEVLADD-------------DGK---ATS-------------DVITSTILMDSYFKN 274
             L +V   +             +G+   AT+             DV T + L++   K 
Sbjct: 336 ALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKK 395

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G    AL L NDM  K  + ++  Y +LI+GFC  G +  A     +ML +GF  + + Y
Sbjct: 396 GLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGY 455

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N L++ LCK GK+ EA   +G +S  G  PD  ++ ++I GLC   ++  A      M+ 
Sbjct: 456 NALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVL 515

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           + V+     +N +I  + R G++  A  + + ML  G   +  T+N LI A  + G++  
Sbjct: 516 EGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEK 575

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
              L +EM+  G+ P + T N+LI   C  G +H AL+   +M+ RG +PDI+TY  LI 
Sbjct: 576 GLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLIN 635

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           G C RG ++EA  +F K+Q  G+  D I +  L
Sbjct: 636 GLCKRGRIQEALNLFEKLQAEGIQPDSITYNTL 668



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 217/438 (49%), Gaps = 10/438 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            VI   C   ++     L  +MI KG  P+ +T+ YL++ LCK   +++A  ++ ++   
Sbjct: 285 TVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKV--- 341

Query: 183 RPSPNCATYNAFITGYCRVNELDKAL-HLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
            P PN   +N  + G+ R   L++A   ++  M NNG  P+  T + LV+ LCKKGL G 
Sbjct: 342 -PGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGS 400

Query: 242 AVKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           A+    E++ D D K    ++ T TIL+D + K G   +A  +  +M  K    + V YN
Sbjct: 401 AL----ELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYN 456

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+  C +G I  A   F +M  +G  PD+ T+N+L+  LC+  ++++A   Y  +   
Sbjct: 457 ALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLE 516

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GV  + +++ T+I      G+I +A + +  ML +    +   +N +I    + G +   
Sbjct: 517 GVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKG 576

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + M+  G++ ++ T N LI      G + +A    ++M+  G  PD+ TYN LI  
Sbjct: 577 LGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLING 636

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  G I  AL L++++   GI PD ITY  LI   C  G   +A  +  +    G   +
Sbjct: 637 LCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPN 696

Query: 541 HIPFRILKKRYRRMKESD 558
            + + IL   + +   S+
Sbjct: 697 DVTWNILVYNFGKQSNSE 714



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 185/421 (43%), Gaps = 43/421 (10%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P   ++N +++ L        A +V  +M     SPN  T+   +   C VNE+D A  L
Sbjct: 173 PSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLL 232

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M  +G  PN + +  L+ AL K+  + +A+K L                        
Sbjct: 233 LRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLL------------------------ 268

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                          +MF      D+  +N +I GFC    +        +M+ +GF P+
Sbjct: 269 --------------EEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPN 314

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            +TY  L++ LCK  ++DEA     +LSK    P+ + + T++ G   +G + +A  F+ 
Sbjct: 315 DMTYGYLMHGLCKTCRIDEAQ---ALLSKVP-GPNVVHFNTLVNGFVRNGRLNEATAFVY 370

Query: 391 -SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M+    VP+   ++ +++G  + G   +A  + + M + G   N+ T+  LI    + 
Sbjct: 371 DKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKK 430

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + +A  + +EML  G   +   YN LI A C  G IH AL ++ EM  +G  PDI T+
Sbjct: 431 GQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTF 490

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
             LI G C    M++A  ++  +   G+  + + F  L   + R  E  +A  +    L 
Sbjct: 491 NSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLF 550

Query: 570 R 570
           R
Sbjct: 551 R 551



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 117/271 (43%), Gaps = 38/271 (14%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC  GKI  AL +  +M  KG  PD+ T N L+  LC++ ++E A  + R+M   
Sbjct: 457 ALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLE 516

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N  T+N  I  + R  E+ +AL L + M   G   + +T+N L+ ALCK G +   
Sbjct: 517 GVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKG 576

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E++       T  +IT  IL++ +   G    AL    DM  +    DIV YN L
Sbjct: 577 LGLFEEMIRKG---LTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSL 633

Query: 303 INGFCLNGDISSAFAYF-------------------------------CQMLKRG----F 327
           ING C  G I  A   F                               C +L RG    F
Sbjct: 634 INGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGF 693

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           +P+ +T+N L+    KQ   +  +  Y   S
Sbjct: 694 VPNDVTWNILVYNFGKQSNSEGQTITYAQFS 724


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 228/454 (50%), Gaps = 3/454 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I   C  G +  A  L   M  KG  P V T+N ++N LCK G   +A  V+
Sbjct: 288 DVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVL 347

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM ++  SP+ ATYN  +   CR + +  A  +F  M + G+ P+ V+ + L+  L K 
Sbjct: 348 DEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 407

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A+K+  ++   + G A  +VI  TIL+  + +NG   +AL + ++M ++    D+
Sbjct: 408 GCLDQALKYFRDM--KNAGLAPDNVIY-TILIGGFCRNGVMSEALKVRDEMLEQGCVLDV 464

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YN ++NG C    +S A   F +M +RG  PD  T+ TL+N   K G +++A   + +
Sbjct: 465 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEM 524

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + +  + PD ++Y T+I G C   ++ K  E    M+ + + P    + ++I+GY   G 
Sbjct: 525 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 584

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +S AF + D M+  G  + + T N ++    R G+   A      MLL GI PD  TYN 
Sbjct: 585 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 644

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI       ++  A  L ++M   G+ PD+ITY  ++ G   +G M+EAE +  K+   G
Sbjct: 645 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 704

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +  D   +  L   +       +A  +H + L R
Sbjct: 705 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 738



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 217/429 (50%), Gaps = 3/429 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A  + +++++ G   +V T N ++N LCK   +E     + +M E    P+  TY
Sbjct: 233 GWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTY 292

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I  YCR   L++A  L  +M+  G++P   T+N +++ LCK G    A   L E+L 
Sbjct: 293 NTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK 352

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                 + D  T  IL+    +N +   A  ++++M  + +  D+V+++ LI     NG 
Sbjct: 353 IG---MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 409

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A  YF  M   G  PD + Y  L+   C+ G + EA      + + G   D ++Y T
Sbjct: 410 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNT 469

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           I+ GLC    + +A E    M E+ V P+ + +  +I+GY + G+++ A ++ ++M+   
Sbjct: 470 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN 529

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  +V T+N LI    +G  +     L  +M+   I+P+  +Y +LI   CN+G +  A 
Sbjct: 530 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 589

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +L+DEM+ +G    IIT   ++KG+C  GN  +A+E  + +   G+  D I +  L   +
Sbjct: 590 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 649

Query: 552 RRMKESDKA 560
            + +  D+A
Sbjct: 650 IKEENMDRA 658



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 222/448 (49%), Gaps = 8/448 (1%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +L+E  + + +M   G   C    +     A+I  LC  GK   A  +  +M++ G  PD
Sbjct: 304 LLEEAFELMDSMSGKGLKPCVFTYN-----AIINGLCKTGKYLRAKGVLDEMLKIGMSPD 358

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
             T+N L+ E C+  ++  A+ +  EM      P+  +++A I    +   LD+AL  F 
Sbjct: 359 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 418

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M N G+ P+ V + IL+   C+ G++ +A+K   E+L   +     DV+T   +++   
Sbjct: 419 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEML---EQGCVLDVVTYNTILNGLC 475

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K     +A  L+ +M ++ +  D   +  LING+  +G+++ A   F  M++R   PDV+
Sbjct: 476 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV 535

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TYNTL++  CK  ++++ +  +  +    + P+ ISY  +I G C  G + +A      M
Sbjct: 536 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 595

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +EK         N I+ GY R G+   A      ML  G+  +  T+N LI    +  ++
Sbjct: 596 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 655

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             AF+L  +M   G+ PDV TYN+++      G +  A  +  +M+ RG+ PD  TYT L
Sbjct: 656 DRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 715

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAID 540
           I GH  + N+KEA  V  ++   G   D
Sbjct: 716 INGHVTQNNLKEAFRVHDEMLQRGFVPD 743



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 187/363 (51%), Gaps = 3/363 (0%)

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N+ + G  +V  +D A  ++  +  +G++ N  T NI+++ALCK   + +   FL ++  
Sbjct: 223 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDM-- 280

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            ++     DV+T   L+++Y + G   +A  L + M  K ++  +  YN +ING C  G 
Sbjct: 281 -EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 339

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A     +MLK G  PD  TYN LL   C+   + +A   +  +   GV PD +S+  
Sbjct: 340 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 399

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I  L  +G + +A ++   M    + P+  I+ ++I G+ R G +S A  +RD ML  G
Sbjct: 400 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 459

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              +V T+N ++    +   + +A  L  EM   G+FPD +T+  LI      G+++ A+
Sbjct: 460 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 519

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            L++ M++R + PD++TY  LI G C    M++  E++  + +  +  +HI + IL   Y
Sbjct: 520 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 579

Query: 552 RRM 554
             M
Sbjct: 580 CNM 582



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 155/292 (53%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  ++ ++ +  +Q ++   N++IN  C N  I +  ++   M ++G  PDV+TYNTL+N
Sbjct: 238 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLIN 297

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C+QG L+EA      +S  G+ P   +Y  II GLC  G  ++A+  L  ML+  + P
Sbjct: 298 AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSP 357

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   +N+++    R  ++ +A  I D M S GV  ++ +F+ALI   ++ G +  A    
Sbjct: 358 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 417

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           ++M   G+ PD   Y +LIG  C  G +  AL++ DEML +G   D++TY  ++ G C  
Sbjct: 418 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKE 477

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             + EA+E+F ++   G+  D   F  L   Y +    +KA  + +  + RN
Sbjct: 478 KMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN 529



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/186 (19%), Positives = 74/186 (39%), Gaps = 18/186 (9%)

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           S+  +I  L     +  A+  +L M+ KS V    I   ++  YG CG            
Sbjct: 134 SFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCG------------ 181

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
                 SN   F+ L+    +   + +     + +   G+   +   N L+G    +G +
Sbjct: 182 ------SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWV 235

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            LA ++Y E++R G+  ++ T   +I   C    ++  +   + ++  G+  D + +  L
Sbjct: 236 DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL 295

Query: 548 KKRYRR 553
              Y R
Sbjct: 296 INAYCR 301


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 229/460 (49%), Gaps = 4/460 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           RC    D   H  ++      G +  A+ L   M+ KG  P ++T+N ++  L + G  +
Sbjct: 188 RCVF-PDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWD 246

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           KA  V R M     +P+  ++N  I G+CR  EL++AL  +  M    + P+ V+ + L+
Sbjct: 247 KAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLI 306

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
               ++G +  A ++L E+    +     D +  T+++  + + G   +AL + ++M   
Sbjct: 307 GLFTRRGEMDHAAEYLREM---REFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAF 363

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
               D+V YN L+NG C    +S A     +M +RG  PD+ T+ TL++  C+ G +++A
Sbjct: 364 GCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKA 423

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
             F+  +S   + PD ++Y T+I G+C  GD+ KA E    M  + + P    ++++ID 
Sbjct: 424 LQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDS 483

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           +   G + NAF+  D M++ G+  N+ T+N++I    R G++        +M  D + PD
Sbjct: 484 HCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPD 543

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           + TYN LI      G +H A  L   M    + PD +TY  +I G    GNM+EA+ V+ 
Sbjct: 544 LITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYK 603

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           K+   G+  D   +  +   +     S K+  +H + L +
Sbjct: 604 KMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQK 643



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 223/438 (50%), Gaps = 6/438 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C   + G    +  +M ++   PDV+THN +V+   + GD+E A  +I  M    
Sbjct: 165 MVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKG 224

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P   TYN+ + G  R    DKA  +F  M   G+ P+  + N+L+   C+ G L +A+
Sbjct: 225 IKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEAL 284

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +F  E+      + T DV++ + L+  + + G+   A     +M +  +  D V Y ++I
Sbjct: 285 RFYKEMRGR---RVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVI 341

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            GFC  G +  A     +M+  G LPDV+TYNTLLN LCK+ +L +A      + + GV 
Sbjct: 342 GGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVP 401

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  ++ T+I G C  G+I KA +F  ++ ++ + P+   +N +IDG  R GDL  A  +
Sbjct: 402 PDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANEL 461

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M S  +  N  T++ LI +    G + +AF+   EM+  GI P++ TYN +I   C 
Sbjct: 462 WDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCR 521

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G++    Q   +M    + PD+ITY  LI G+   G M EA  +   ++   +  D + 
Sbjct: 522 SGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVT 581

Query: 544 FRILKKRYR---RMKESD 558
           + ++   +     M+E+D
Sbjct: 582 YNMIISGFSVHGNMQEAD 599



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 215/418 (51%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +V++ L   G+   A  + R M   G  PDV + N L+   C+ G+LE+A    +EM   
Sbjct: 234 SVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGR 293

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R +P+  +++  I  + R  E+D A      M   G+ P+ V + +++   C+ GL+ +A
Sbjct: 294 RVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEA 353

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++   E++A        DV+T   L++   K      A  L N+M ++ +  D+  +  L
Sbjct: 354 LRVRDEMVA---FGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTL 410

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G+C +G+I  A  +F  +  +   PD++TYNTL++ +C+QG L +A+  +  +    +
Sbjct: 411 IHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREI 470

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ ++Y  +I   C  G +  A  FL  M+ K +VP    +N II GY R G++S    
Sbjct: 471 FPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQ 530

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
               M    V  ++ T+N LI    + G + +AF+L K M  + + PD  TYN++I    
Sbjct: 531 FLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFS 590

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             G++  A  +Y +M  RGI PD  TY  +I GH   GN K++ ++  ++   GLA D
Sbjct: 591 VHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 173/326 (53%), Gaps = 3/326 (0%)

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           N  T NI+VH+ CK    G+    + E+   +      DV+T  +++D+ F+ GD   A+
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEM---EKRCVFPDVVTHNVMVDARFRAGDVEAAM 214

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
           AL + M  K I+  +V YN ++ G   NG    A   F  M   G  PDV ++N L+   
Sbjct: 215 ALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGF 274

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           C+ G+L+EA  FY  +    V PD +S+  +I      G++  A E+L  M E  ++P+ 
Sbjct: 275 CRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDG 334

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
            I+ ++I G+ R G +  A  +RD M++FG   +V T+N L+    +   + DA  L  E
Sbjct: 335 VIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNE 394

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           M   G+ PD+ T+  LI   C  G+I  ALQ +D +  + + PDI+TY  LI G C +G+
Sbjct: 395 MKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGD 454

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + +A E++  + +  +  +H+ + IL
Sbjct: 455 LGKANELWDDMHSREIFPNHVTYSIL 480



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 191/395 (48%), Gaps = 13/395 (3%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG---LLG 240
           P+P    ++  I  Y +  +  +A   F  + ++ +       N L+ AL + G   L  
Sbjct: 85  PTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTA 144

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA +    VL+ +   +  +  T  I++ SY K     +   + ++M ++ +  D+V +N
Sbjct: 145 DAYRL---VLSSN---SEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHN 198

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           V+++     GD+ +A A    M+ +G  P ++TYN++L  L + G+ D+A   +  +   
Sbjct: 199 VMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDAC 258

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GVAPD  S+  +I G C  G++ +A  F   M  + V P+   ++ +I  + R G++ +A
Sbjct: 259 GVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHA 318

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
                 M  FG+  +   +  +I    R G + +A  ++ EM+  G  PDV TYN L+  
Sbjct: 319 AEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNG 378

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    +  A +L +EM  RG+ PD+ T+T LI G+C  GN+++A + F  I    L  D
Sbjct: 379 LCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPD 438

Query: 541 HIPFRILKKRYRRMKESDKAR----DIHQKWLLRN 571
            + +  L     R  +  KA     D+H + +  N
Sbjct: 439 IVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPN 473



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 35/205 (17%)

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV------------------ 432
           S+L  S  P+P +++++I  Y +      AF    L+L   V                  
Sbjct: 79  SLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAG 138

Query: 433 -----------------SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
                              N +T N ++ +  +     +  ++  EM    +FPDV T+N
Sbjct: 139 WPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHN 198

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           +++ A    G +  A+ L D M+ +GI P ++TY  ++KG    G   +A EVF  +   
Sbjct: 199 VMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDAC 258

Query: 536 GLAIDHIPFRILKKRYRRMKESDKA 560
           G+A D   F +L   + R  E ++A
Sbjct: 259 GVAPDVRSFNMLIGGFCRAGELEEA 283


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 228/454 (50%), Gaps = 3/454 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I   C  G +  A  L   M  KG  P V T+N ++N LCK G   +A  V+
Sbjct: 131 DVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVL 190

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM ++  SP+ ATYN  +   CR + +  A  +F  M + G+ P+ V+ + L+  L K 
Sbjct: 191 DEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 250

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A+K+  ++   + G A  +VI  TIL+  + +NG   +AL + ++M ++    D+
Sbjct: 251 GCLDQALKYFRDM--KNAGLAPDNVIY-TILIGGFCRNGVMSEALKVRDEMLEQGCVLDV 307

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YN ++NG C    +S A   F +M +RG  PD  T+ TL+N   K G +++A   + +
Sbjct: 308 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEM 367

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + +  + PD ++Y T+I G C   ++ K  E    M+ + + P    + ++I+GY   G 
Sbjct: 368 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 427

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +S AF + D M+  G  + + T N ++    R G+   A      MLL GI PD  TYN 
Sbjct: 428 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 487

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI       ++  A  L ++M   G+ PD+ITY  ++ G   +G M+EAE +  K+   G
Sbjct: 488 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 547

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +  D   +  L   +       +A  +H + L R
Sbjct: 548 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 581



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 217/429 (50%), Gaps = 3/429 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A  + +++++ G   +V T N ++N LCK   +E     + +M E    P+  TY
Sbjct: 76  GWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTY 135

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I  YCR   L++A  L  +M+  G++P   T+N +++ LCK G    A   L E+L 
Sbjct: 136 NTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK 195

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                 + D  T  IL+    +N +   A  ++++M  + +  D+V+++ LI     NG 
Sbjct: 196 IG---MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 252

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A  YF  M   G  PD + Y  L+   C+ G + EA      + + G   D ++Y T
Sbjct: 253 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNT 312

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           I+ GLC    + +A E    M E+ V P+ + +  +I+GY + G+++ A ++ ++M+   
Sbjct: 313 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN 372

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  +V T+N LI    +G  +     L  +M+   I+P+  +Y +LI   CN+G +  A 
Sbjct: 373 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 432

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +L+DEM+ +G    IIT   ++KG+C  GN  +A+E  + +   G+  D I +  L   +
Sbjct: 433 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 492

Query: 552 RRMKESDKA 560
            + +  D+A
Sbjct: 493 IKEENMDRA 501



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 222/448 (49%), Gaps = 8/448 (1%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +L+E  + + +M   G   C    +     A+I  LC  GK   A  +  +M++ G  PD
Sbjct: 147 LLEEAFELMDSMSGKGLKPCVFTYN-----AIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
             T+N L+ E C+  ++  A+ +  EM      P+  +++A I    +   LD+AL  F 
Sbjct: 202 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 261

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M N G+ P+ V + IL+   C+ G++ +A+K   E+L   +     DV+T   +++   
Sbjct: 262 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEML---EQGCVLDVVTYNTILNGLC 318

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K     +A  L+ +M ++ +  D   +  LING+  +G+++ A   F  M++R   PDV+
Sbjct: 319 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV 378

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TYNTL++  CK  ++++ +  +  +    + P+ ISY  +I G C  G + +A      M
Sbjct: 379 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 438

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +EK         N I+ GY R G+   A      ML  G+  +  T+N LI    +  ++
Sbjct: 439 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 498

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             AF+L  +M   G+ PDV TYN+++      G +  A  +  +M+ RG+ PD  TYT L
Sbjct: 499 DRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 558

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAID 540
           I GH  + N+KEA  V  ++   G   D
Sbjct: 559 INGHVTQNNLKEAFRVHDEMLQRGFVPD 586



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 187/363 (51%), Gaps = 3/363 (0%)

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N+ + G  +V  +D A  ++  +  +G++ N  T NI+++ALCK   + +   FL ++  
Sbjct: 66  NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDM-- 123

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            ++     DV+T   L+++Y + G   +A  L + M  K ++  +  YN +ING C  G 
Sbjct: 124 -EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 182

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A     +MLK G  PD  TYN LL   C+   + +A   +  +   GV PD +S+  
Sbjct: 183 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 242

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I  L  +G + +A ++   M    + P+  I+ ++I G+ R G +S A  +RD ML  G
Sbjct: 243 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              +V T+N ++    +   + +A  L  EM   G+FPD +T+  LI      G+++ A+
Sbjct: 303 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 362

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            L++ M++R + PD++TY  LI G C    M++  E++  + +  +  +HI + IL   Y
Sbjct: 363 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 422

Query: 552 RRM 554
             M
Sbjct: 423 CNM 425



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 155/292 (53%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  ++ ++ +  +Q ++   N++IN  C N  I +  ++   M ++G  PDV+TYNTL+N
Sbjct: 81  AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLIN 140

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C+QG L+EA      +S  G+ P   +Y  II GLC  G  ++A+  L  ML+  + P
Sbjct: 141 AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSP 200

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   +N+++    R  ++ +A  I D M S GV  ++ +F+ALI   ++ G +  A    
Sbjct: 201 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 260

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           ++M   G+ PD   Y +LIG  C  G +  AL++ DEML +G   D++TY  ++ G C  
Sbjct: 261 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKE 320

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             + EA+E+F ++   G+  D   F  L   Y +    +KA  + +  + RN
Sbjct: 321 KMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN 372



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 17/163 (10%)

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGD-----------LSNAFSIRD------LMLSFGVSS 434
           M+ KS V    I   ++  YG CG               A  +R+      ++ S G+  
Sbjct: 1   MVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCV 60

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           ++   N+L+    + G +  A+ + +E++  G+  +V+T N++I A C    I       
Sbjct: 61  SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFL 120

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            +M  +G+ PD++TY  LI  +C +G ++EA E+   +   GL
Sbjct: 121 SDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGL 163


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 233/462 (50%), Gaps = 9/462 (1%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MR+  P R T          V++  C  GK+     L  +M+  G  PD + +N L++  
Sbjct: 1   MRECSPNRYTFRV-------VLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGY 53

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
            K G +++A+ +  EM  +   P+  TYN+ +  +C+  ++ +A+ LF TMA  G  P+ 
Sbjct: 54  AKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDV 113

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           VT++ ++  LCK G + +A++ L   + +     +++ +    L++   K+ +  +A  L
Sbjct: 114 VTYSTIISGLCKTGKVTEALEMLFHKMIERG--CSANTVAYNALINGLCKDENIERAYKL 171

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
             +M  K    D + YN +++G C  G +S A  +F  M  RG+ PDV+ YN LL+ L K
Sbjct: 172 LEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYK 231

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
           +GK DEA   +  +   G  PD ++Y +I+ GL    ++ +A E    M+     P    
Sbjct: 232 EGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGAT 291

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +++++ G+ R   + +A  + + M   G   +V T+N L+    +   +  A  L   M+
Sbjct: 292 YSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV 351

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
            +G  PD+ +Y++++   C    +H A  L+D M+ R + PD++T+  L+ G C  G + 
Sbjct: 352 DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLD 411

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           EA+++  ++   G A D++ +  L    R+     +A  + Q
Sbjct: 412 EAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQ 453



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 189/380 (49%), Gaps = 9/380 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL-WLRRKMIQKGTVPD 152
           +KE ++  KTM + G      E D   +  +I  LC  GK+  AL  L  KMI++G   +
Sbjct: 94  MKEAMELFKTMAEKG-----FEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSAN 148

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
            + +N L+N LCK  ++E+A  ++ EM+     P+  TYN  ++G CR+ ++ +A   F 
Sbjct: 149 TVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFD 208

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
           +M + G  P+ V +N L+ AL K+G   +A+K   +V+A        D +T   ++    
Sbjct: 209 SMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKG---YMPDTVTYNSILLGLA 265

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           +  +  +A  ++  M       +   Y+++++G C    +  A     +M K G +PDV+
Sbjct: 266 RKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVV 325

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TYN LL+ LCK   +D+A   +  +   G APD +SY  ++ GLC    +  AR     M
Sbjct: 326 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 385

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +E+ +VP+   +N+++DG  + G L  A  + D M   G + +   +N L+    + G  
Sbjct: 386 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRH 445

Query: 453 FDAFSLKKEMLLDGIFPDVF 472
             A  L + M   G   D F
Sbjct: 446 IQADRLTQAMKEKGFLSDCF 465


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 240/479 (50%), Gaps = 9/479 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           ++ LD L+ M     V C+   D   +  VI      GKIG A  L  +M+Q+G VPDV+
Sbjct: 96  QQALDLLRMMAKEEGV-CS--PDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVV 152

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           THN ++N LCK   ++ A+ ++R+M +    PN  TY + I GY  +   ++A  +F  M
Sbjct: 153 THNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREM 212

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G+ P+ V+ N  + +LCK G   +A +    + A        +++T  IL+  Y   
Sbjct: 213 TGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGH---RPNIVTYGILLHGYATE 269

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G     ++ +N M    I  + + + +LI+ +   G +  A     +M  +G  PDV TY
Sbjct: 270 GCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTY 329

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           +TL++ LC+ G+L +A   +  +  TGV P+ + Y ++IQG C HGD+VKA+E +  M+ 
Sbjct: 330 STLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMN 389

Query: 395 KSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
              +P P+I  +N I+    + G + +A  I DL+   G  S++  FN LI      G +
Sbjct: 390 NG-IPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEM 448

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             AFS+   M+  GI PD FTYN L+      G I   L L+ EM  + I P  +TY  +
Sbjct: 449 GKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNII 508

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           + G    G    A+++  ++   G  +    + I+ K   R   +D+A  + QK    N
Sbjct: 509 LDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMN 567



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 183/394 (46%), Gaps = 35/394 (8%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P   TY   + G CR    +  L  F  +   G++ ++   N ++  LC      DAVK 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 246 LGE-----------------------------------VLADDDGKATSDVITSTILMDS 270
           L                                     ++A ++G  + DV+T   ++  
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           +FK G   +A  L+++M Q+    D+V +N +IN  C    + +A     QM+  G  P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            +TY ++++     G+ +EA+  +  ++  G+ PD +S+ + +  LC HG   +A E   
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
           SM  K   P    + +++ GY   G  ++  S  + M   G+ +N   F  LI A  + G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A  +  EM   G+ PDVFTY+ LI A C +G +  A+  +++M+  G+ P+ + Y 
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            LI+G C  G++ +A+E+  ++   G+   +I F
Sbjct: 366 SLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAF 399



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 141/313 (45%), Gaps = 9/313 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV-PD 152
           L + +D+   M  TG     ++ +   + ++I+  C  G +  A  L  +M+  G   P+
Sbjct: 342 LADAVDKFNQMIGTG-----VQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPN 396

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           +   N +V+ +CK G +  A H+   + ++    +   +N  I GYC V E+ KA  +  
Sbjct: 397 IAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLD 456

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M + GI P+  T+N LV+   K G + D +    E+    D K     +T  I++D  F
Sbjct: 457 AMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREM---SDKKIKPTTVTYNIILDGLF 513

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           + G    A  + ++M        +  YN+++ G C N     A   F ++       ++ 
Sbjct: 514 RAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNIT 573

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           T NT++N +    + +EA   +  +S +G+ P+  +Y  +I+ L   G + +A     SM
Sbjct: 574 TLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSM 633

Query: 393 LEKSVVPEPHIWN 405
            +    P   + N
Sbjct: 634 EKSGCAPCSRLLN 646


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 135/458 (29%), Positives = 232/458 (50%), Gaps = 15/458 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC  G++  A+ L  +M++ G  P+ +T+  +V+ +CK+GD   A +++R+M E+
Sbjct: 187 TLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEV 246

Query: 183 RPS-PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               PN   YN  I G  +      A +LF  M    I P+ VT+N +++  C  G   D
Sbjct: 247 SHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSD 306

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A + L E+L   + K   DV+T + L++++ K G  F+A  L+++M  ++I    V Y+ 
Sbjct: 307 AEQLLQEML---ERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSS 363

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +I+GFC    + +A   F     +G  PD+IT+NTL+   C+  ++D+       +++ G
Sbjct: 364 MIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 423

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           +  + I+Y T+I G C  GD+  A++ L  M+   V P     N ++DG    G L +A 
Sbjct: 424 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDAL 483

Query: 422 SIRDLMLSF-----------GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            +   M              GV  +V T+N LI      G   +A  L +EM   GI PD
Sbjct: 484 EMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 543

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             TY+ +I   C    +  A Q++D M  +  +PD++T+  LI G+C  G + +  E+F 
Sbjct: 544 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFC 603

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           ++   G+  D I +  L   +R++   D A DI Q+ +
Sbjct: 604 EMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMI 641



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 208/430 (48%), Gaps = 17/430 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  L   G+   A  L  +M +K   PD++T+N ++N  C  G    A+ +++EM E 
Sbjct: 258 TIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLER 317

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           + +P+  T++A I  + +  +  +A  L+  M    I P+ VT++ ++   CK+  L  A
Sbjct: 318 KINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAA 377

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                  L    G  + D+IT   L+  Y +       + L ++M +  +  + + Y  L
Sbjct: 378 EHMF--YLTPTKG-CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTL 434

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT-- 360
           I+GFC  GD+++A     +M+  G  P+V+T NTLL+ LC  GKL +A   +  + K+  
Sbjct: 435 IHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 361 ---------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                    GV PD  +Y  +I GL   G  ++A E    M  + +VP+   ++ +IDG 
Sbjct: 495 DIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +   L  A  + D M S   S +V TFN LI    + G + D   L  EM   GI  D 
Sbjct: 555 CKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADA 614

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TY  LI     + +I  AL ++ EM+  G+ PD IT   ++ G  ++   +E E   A 
Sbjct: 615 ITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSK---EELERAVAM 671

Query: 532 IQTLGLAIDH 541
           ++ L +++ +
Sbjct: 672 LEDLQMSVGY 681



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 224/488 (45%), Gaps = 24/488 (4%)

Query: 64  CRSKTRHWFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRD----------TGPVRCT 113
           C    R   + K  D E + +A F    L L+     +K + D          + P+   
Sbjct: 23  CTRSIRDTLAKKSRDGESD-EAGFGGESLKLQSGFHEIKGLDDAIDLFGYMVRSRPLPSV 81

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D+ + + V+  +   G+    + L +KM       +  +   L+   C    L  A 
Sbjct: 82  I--DFCKLMGVVVRM---GRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFAL 136

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
               +++++   P   T+N  + G C  + + +AL LF  M     +PN VT   L++ L
Sbjct: 137 STFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMC----KPNVVTFTTLMNGL 192

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ-KNI 292
           C++G + +AV  L  +L  +DG   + +   TI+ D   K GD   AL L   M +  +I
Sbjct: 193 CREGRVVEAVALLDRML--EDGLQPNQITYGTIV-DGMCKMGDTVSALNLLRKMEEVSHI 249

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             ++V YN +I+G   +G  S A   F +M ++   PD++TYN ++N  C  G+  +A  
Sbjct: 250 IPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQ 309

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               + +  + PD +++  +I      G   +A E    ML +S++P    ++ +IDG+ 
Sbjct: 310 LLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFC 369

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +   L  A  +  L  + G S ++ TFN LI    R   + D   L  EM   G+  +  
Sbjct: 370 KQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTI 429

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY  LI   C +G ++ A  L  EM+  G+ P+++T   L+ G C  G +K+A E+F  +
Sbjct: 430 TYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 489

Query: 533 QTLGLAID 540
           Q   + ID
Sbjct: 490 QKSKMDID 497



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 191/435 (43%), Gaps = 61/435 (14%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++   +P V+    L+  + ++G  +    + ++M  +R   N  ++   +  +C  ++
Sbjct: 72  MVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSK 131

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           L  AL  F  +   G  P  VT N L+H                       G    D I+
Sbjct: 132 LPFALSTFGKITKLGFHPTVVTFNTLLH-----------------------GLCVEDRIS 168

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             +                   D+F +  + ++V +  L+NG C  G +  A A   +ML
Sbjct: 169 EAL-------------------DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRML 209

Query: 324 KRGFLPDVITYNTLLNCLCKQG----------KLDEASHFYGVLSKTGVAPDQISYKTII 373
           + G  P+ ITY T+++ +CK G          K++E SH         + P+ + Y TII
Sbjct: 210 EDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSH---------IIPNVVIYNTII 260

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            GL   G    A    + M EK + P+   +N +I+G+   G  S+A  +   ML   ++
Sbjct: 261 DGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKIN 320

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            +V TF+ALI A  + G  F+A  L  EML   I P   TY+ +I   C    +  A  +
Sbjct: 321 PDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHM 380

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           +     +G +PDIIT+  LI G+C    + +  ++  ++   GL  + I +  L   + +
Sbjct: 381 FYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 440

Query: 554 MKESDKARDIHQKWL 568
           + + + A+D+ Q+ +
Sbjct: 441 VGDLNAAQDLLQEMI 455



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 116/240 (48%), Gaps = 5/240 (2%)

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           ++  L+ C C   KL  A   +G ++K G  P  +++ T++ GLC+   I +A +    M
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
            + +VV     +  +++G  R G +  A ++ D ML  G+  N  T+  ++    + G  
Sbjct: 178 CKPNVV----TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233

Query: 453 FDAFSLKKEML-LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
             A +L ++M  +  I P+V  YN +I      G    A  L+ EM  + I PDI+TY  
Sbjct: 234 VSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNC 293

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           +I G C  G   +AE++  ++    +  D + F  L   + +  +  +A +++ + L R+
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRS 353



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 9/200 (4%)

Query: 94  LKENLDRLKTMR------DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           LK+ L+  K M+      D       +E D + +  +I  L   GK   A  L  +M  +
Sbjct: 479 LKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHR 538

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VPD +T++ +++ LCK   L++A  +   M     SP+  T+N  ITGYC+   +D  
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDG 598

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           L LF  M   GI  + +T+  L++   K   +  A+    E+++        D IT   +
Sbjct: 599 LELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMIS---SGVYPDTITIRNM 655

Query: 268 MDSYFKNGDKFQALALWNDM 287
           +   +   +  +A+A+  D+
Sbjct: 656 LTGLWSKEELERAVAMLEDL 675


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 241/457 (52%), Gaps = 14/457 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC  G++  AL L  +M+++G  PD +T+  +VN +CK+GD   A +++R+M E 
Sbjct: 15  TLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDES 74

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +   N   Y+A +   C+     KA ++F+ M   GI PN +T+N ++   C  G   DA
Sbjct: 75  QIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDA 134

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +++   +     DV+T + L++++ K G    A  L+ +M ++NI    + Y+ +
Sbjct: 135 EQLLRDMI---ERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSM 191

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN--C---------LCKQGKLDEAS 351
           I+GFC +  +  A   F  M+ +G  PD+IT NTL++  C          C+ G ++ A 
Sbjct: 192 IDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQ 251

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
             +  +   GV+PD ++  T++ GLC +G + KA E      +  +  +    N+II+G 
Sbjct: 252 DLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGM 311

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +   +  A+ + + +   GV ++V T+N LI    + G+   A  +  EML  GI P  
Sbjct: 312 CKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPST 371

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TYN ++   C    +  A Q+ D M+  G +PD++T++ LIKG+C  G + +  E+F++
Sbjct: 372 VTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSE 431

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +   GL  D I +  L   + ++ + + A+DI ++ +
Sbjct: 432 MCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMV 468



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 207/432 (47%), Gaps = 17/432 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++  LC  G    A  +  +M +KG  P+VLT+N +++  C  G    A+ ++R+M 
Sbjct: 83  YSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMI 142

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    P+  T++A I  + +  ++  A  L+  M    I P  +T++ ++   CK   L 
Sbjct: 143 ERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLE 202

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDS-----------YFKNGDKFQALALWNDMFQ 289
           DA      +++      + D+IT   L+D            + + G+   A  L+ +M  
Sbjct: 203 DAKHMFDLMVSK---GCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMIS 259

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             +  DIV  N L+ G C NG +  A   F    K     D  T N ++N +CK  K+DE
Sbjct: 260 NGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDE 319

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   +  L   GV  D ++Y  +I      G+ ++A +  L ML K ++P    +N ++D
Sbjct: 320 AWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVD 379

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G+ +   L  A  + D M+S G S +V TF+ LI    + G + D   L  EM   G+  
Sbjct: 380 GFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVA 439

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D  TYN LI   C +G ++ A  +++EM+  G+ PD IT+  ++ G C +  +++   + 
Sbjct: 440 DTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTML 499

Query: 530 AKIQTLGLAIDH 541
             +Q    ++DH
Sbjct: 500 EDLQK---SVDH 508



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 170/341 (49%), Gaps = 14/341 (4%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D     A+I      GK+  A  L R+M+++   P  +T++ +++  CK   LE A 
Sbjct: 146 IDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAK 205

Query: 174 HVIREMSEMRPSPNCATYNAFIT-----------GYCRVNELDKALHLFSTMANNGIRPN 222
           H+   M     SP+  T N  I            G+C+V  ++ A  LF  M +NG+ P+
Sbjct: 206 HMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPD 265

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
            VT N L+  LC+ G L  A++           K   D  T  I+++   K     +A  
Sbjct: 266 IVTCNTLLAGLCENGKLEKALEMFKVF---QKSKMDLDTATCNIIINGMCKGNKVDEAWD 322

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           L+N +    ++TD+V YN+LI  F   G+   A   + +ML +G +P  +TYN++++  C
Sbjct: 323 LFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFC 382

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           KQ +L+EA      +   G +PD +++ T+I+G C  G +    E    M ++ +V +  
Sbjct: 383 KQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTI 442

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            +N +I G+ + GDL+ A  I + M+S GV  +  TF +++
Sbjct: 443 TYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSML 483



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 160/316 (50%), Gaps = 11/316 (3%)

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           ++V+T T LM+   + G   QALAL + M ++  Q D V Y  ++NG C  GD  SA   
Sbjct: 8   ANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNM 67

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             +M +     +V+ Y+ +++ LCK G   +A + +  + + G+ P+ ++Y  +I G C 
Sbjct: 68  LRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCS 127

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
           +G    A + L  M+E+++ P+   ++ +I+ + + G +S A  +   ML   +     T
Sbjct: 128 YGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTIT 187

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS-----------CNLGHI 487
           ++++I    +   + DA  +   M+  G  PD+ T N LI              C +G++
Sbjct: 188 YSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNV 247

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++A  L+ EM+  G++PDI+T   L+ G C  G +++A E+F   Q   + +D     I+
Sbjct: 248 NVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNII 307

Query: 548 KKRYRRMKESDKARDI 563
                +  + D+A D+
Sbjct: 308 INGMCKGNKVDEAWDL 323



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 135/272 (49%), Gaps = 11/272 (4%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +     ++V +  L+NG C  G +  A A   +M++ G  PD +TY T++N +CK G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
              A +    + ++ +  + + Y  I+  LC  G+ +KA+     M EK + P    +N 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +IDGY   G  S+A  +   M+   +  +V TF+ALI A  + G +  A  L +EML   
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT-----------ELIKG 515
           IFP   TY+ +I   C    +  A  ++D M+ +G +PDIIT              LI G
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            C  GN+  A+++F ++ + G++ D +    L
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTL 272



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 68/138 (49%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++   C   ++  A  +   M+ +G  PDV+T + L+   CK G ++    +  EM + 
Sbjct: 376 SMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQR 435

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +  TYNA I G+C+V +L+ A  +F  M ++G+ P+ +T   ++  LC K  L   
Sbjct: 436 GLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKG 495

Query: 243 VKFLGEVLADDDGKATSD 260
           +  L ++    D +   D
Sbjct: 496 LTMLEDLQKSVDHELEDD 513



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 85/180 (47%)

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M+E         +  +++G  R G +  A ++ D M+  G   +  T+  ++    + G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
              A ++ ++M    I  +V  Y+ ++   C  G+   A  ++ EM  +GI P+++TY  
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           +I G+C+ G   +AE++   +    +  D + F  L   + +  +   A +++++ L RN
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 205/389 (52%), Gaps = 3/389 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G  P+V T+N LV  LC  G  ++A  V+R+M      PN  TYN  +  +CR  E
Sbjct: 148 MLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGE 207

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D+A  L   M   G++PN VT N +V+ +CK G + DA K   E++ +       D ++
Sbjct: 208 VDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG---LAPDGVS 264

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              L+  Y K G   +AL+++ +M +K I  D+V +  LI+  C  G++  A     +M 
Sbjct: 265 YNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMR 324

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           +RG   + IT+  L++  CK+G LD+A      + +  + P  + Y  +I G C+ G + 
Sbjct: 325 ERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMD 384

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +ARE +  M  K V P+   ++ I+  Y + GD  +AF +   ML  GV  +  T+++LI
Sbjct: 385 EARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLI 444

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                   + DA  L K M+  G+ PD  TY  LI   C  G++  AL L+DEM++ G+ 
Sbjct: 445 RVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVL 504

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKI 532
           PD++TY+ LI G       KEA+ +  K+
Sbjct: 505 PDVVTYSVLINGLSKSARTKEAQRLLFKL 533



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 149/508 (29%), Positives = 237/508 (46%), Gaps = 33/508 (6%)

Query: 54  NDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAVFNALDLIL------KENLDRLKTMRDT 107
           N ++  + D      R +F +  SD        +N L   L      KE L  L+ MR  
Sbjct: 127 NAVLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGA 186

Query: 108 G--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCK 165
           G  P   T  T       ++   C  G++  A  L   M + G  P+++T N +VN +CK
Sbjct: 187 GCDPNAVTYNT-------LVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 166 IGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
            G +E A  V  EM +   +P+  +YN  + GYC+V    +AL +F+ M   GI P+ VT
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
              L+H +CK G L  AV  + E+   + G   ++ IT T L+D + K G    AL    
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREM--RERGLQMNE-ITFTALIDGFCKKGFLDDALLAVR 356

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
           +M Q  IQ  +V YN LING+C+ G +  A     +M  +G  PDV+TY+T+L+  CK G
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
               A      + + GV PD I+Y ++I+ LC    +  A     +M+   + P+   + 
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            +IDG+ + G++  A S+ D M+  GV  +V T++ LI   ++     +A  L  ++  +
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHE 536

Query: 466 GIFPDVFTYN---------------LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
              P    Y+                L+   C  G ++ A ++Y  +L R    D   Y+
Sbjct: 537 EPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYS 596

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            LI GHC  GN+ +A     ++   G A
Sbjct: 597 VLIHGHCREGNVMKALSFHKQMLQCGFA 624



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 197/385 (51%), Gaps = 6/385 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           +P+   YNA +      + L  A   F +M ++G+ PN  T+NILV ALC +G   +A+ 
Sbjct: 120 APSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 178

Query: 245 FLGEVLADDDGKAT-SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               VL D  G     + +T   L+ ++ + G+  +A  L + M +  ++ ++V +N ++
Sbjct: 179 ----VLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVV 234

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C  G +  A   F +M+K G  PD ++YNTL+   CK G   EA   +  +++ G+ 
Sbjct: 235 NGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIM 294

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +++ ++I  +C  G++ +A   +  M E+ +      +  +IDG+ + G L +A   
Sbjct: 295 PDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLA 354

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M    +  +V  +NALI      G + +A  L +EM   G+ PDV TY+ ++ A C 
Sbjct: 355 VREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCK 414

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G  H A QL  +ML  G+ PD ITY+ LI+  C    + +A  +F  + +LGL  D + 
Sbjct: 415 NGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVT 474

Query: 544 FRILKKRYRRMKESDKARDIHQKWL 568
           +  L   + +    ++A  +H + +
Sbjct: 475 YTSLIDGHCKEGNVERALSLHDEMV 499



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 175/392 (44%), Gaps = 27/392 (6%)

Query: 97  NLDR----LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           NL+R    ++ MR+ G     L+ +     A+I   C  G +  AL   R+M Q    P 
Sbjct: 312 NLERAVGLVREMRERG-----LQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPS 366

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V+ +N L+N  C +G +++A  ++REM      P+  TY+  ++ YC+  +   A  L  
Sbjct: 367 VVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQ 426

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M  NG+ P+ +T++ L+  LC++  LGDA      +++        D +T T L+D + 
Sbjct: 427 QMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLG---LQPDEVTYTSLIDGHC 483

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G+  +AL+L ++M +  +  D+V Y+VLING   +     A     ++     +P  I
Sbjct: 484 KEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANI 543

Query: 333 TYNTLLNC---------------LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            Y+ L+ C                C +G ++EA   Y  +       D   Y  +I G C
Sbjct: 544 KYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHC 603

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G+++KA  F   ML+    P       +I G    G +  A  +   +L+    ++  
Sbjct: 604 REGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAE 663

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
              ALI    + G++     +   M  DG+ P
Sbjct: 664 ASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 140/301 (46%), Gaps = 12/301 (3%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  ++   C  G   +A  L ++M++ G +PD +T++ L+  LC+   L  A 
Sbjct: 398 VKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAH 457

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + + M  +   P+  TY + I G+C+   +++AL L   M   G+ P+ VT+++L++ L
Sbjct: 458 VLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGL 517

Query: 234 CKKGLLGDAVKFLGEVLADDDGKAT------------SDVITSTILMDSYFKNGDKFQAL 281
            K     +A + L ++  ++   A             +++ +   L+  +   G   +A 
Sbjct: 518 SKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEAD 577

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            ++  +  +N   D   Y+VLI+G C  G++  A ++  QML+ GF P+  +  +L+  L
Sbjct: 578 KVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGL 637

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
            ++G + EA      L       D  + K +I      G++    + L  M    ++P P
Sbjct: 638 FEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPSP 697

Query: 402 H 402
            
Sbjct: 698 R 698


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 146/474 (30%), Positives = 241/474 (50%), Gaps = 9/474 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E LD ++ M   G  RC+   D      VI      G++  A  L  +M+QKG  PDV+
Sbjct: 244 QEALDMVQRMAKEGG-RCS--PDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVV 300

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+N +V+ LCK   ++KA+ V+R+M +    P+  TY A I GY       ++  +F  M
Sbjct: 301 TYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKM 360

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            + G+ P  VT N  + +LCK G   DA +    +          D+++ +IL+  Y   
Sbjct: 361 TSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGH---MPDLVSYSILLHGYATE 417

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G       L++ M  K I  +   +N+LI+     G +  A   F +M  +G  PDV+TY
Sbjct: 418 GRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTY 477

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           +TL++  C+ G+L +A   +  +   G+ P+ + Y ++I G C+HGD+VKA+E +  M+ 
Sbjct: 478 STLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMS 537

Query: 395 KSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           K  +P P+I  ++ II      G + +A  + +L++  G    + TFN+LI      G +
Sbjct: 538 KG-IPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKM 596

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             AF +   M+  GI PDV TYN L+   C  G I   L L+ EML + + P  +TY+ +
Sbjct: 597 EKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIV 656

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           + G    G    A+++F ++   G A+D   ++IL K   R   +D+A  +  K
Sbjct: 657 LDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHK 710



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 187/357 (52%), Gaps = 8/357 (2%)

Query: 192 NAFITGYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           N F+   C     D+A+  L   M++ G  PN +++N ++ +LC      +A+  + + +
Sbjct: 195 NTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMV-QRM 253

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
           A + G+ + DV++   ++  +FK G+  +A  L N+M QK ++ D+V YN +++  C   
Sbjct: 254 AKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKAR 313

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A     QM+ +G  PD +TY  +++     G   E++  +  ++  G+ P  +++ 
Sbjct: 314 AMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFN 373

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY---GRCGDLSNAFSIRDLM 427
           + +  LC HG    A E    M  K  +P+   +++++ GY   GR  D++N F     M
Sbjct: 374 SFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLF---HSM 430

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              G+ +N   FN LI A  + G + +A  +  EM   G+ PDV TY+ LI A C +G +
Sbjct: 431 ADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRL 490

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
             A++ + +M+  G+ P+ + Y  LI G C  G++ +A+E+ +++ + G+   +I F
Sbjct: 491 ADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVF 547



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 209/445 (46%), Gaps = 12/445 (2%)

Query: 123 AVIRDLCLGGK---IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHVIRE 178
            ++ D C   +   +G A + R  +++ G     +  N  +  LC     ++A D ++  
Sbjct: 160 GILMDCCCRARRPDLGPAFFAR--LLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHR 217

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR--PNRVTHNILVHALCKK 236
           MS++   PN  +YN  I   C  +   +AL +   MA  G R  P+ V+ N ++H   K+
Sbjct: 218 MSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 277

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G +  A   + E++         DV+T   ++D+  K     +A  +   M  K ++ D 
Sbjct: 278 GEVSKACNLINEMVQKG---VEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDG 334

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + Y  +I+G+  +G    +   F +M  +G +P ++T+N+ ++ LCK G+  +A   +  
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQY 394

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           ++  G  PD +SY  ++ G    G          SM +K +V   H +N++I  + + G 
Sbjct: 395 MTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGM 454

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A  +   M   GV  +V T++ LI A  R G + DA     +M+  G+ P+   Y+ 
Sbjct: 455 MDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHS 514

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGIT-PDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           LI   C  G +  A +L  EM+ +GI  P+I+ ++ +I   C  G + +A +VF  +  +
Sbjct: 515 LIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHI 574

Query: 536 GLAIDHIPFRILKKRYRRMKESDKA 560
           G     + F  L   Y  + + +KA
Sbjct: 575 GDRPTIVTFNSLIDGYCLVGKMEKA 599



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/503 (22%), Positives = 210/503 (41%), Gaps = 79/503 (15%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+ M D G     +E D   + A+I      G    +  + RKM  KG +P ++T N  +
Sbjct: 322 LRQMVDKG-----VEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFM 376

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           + LCK G  + A+ + + M+     P+  +Y+  + GY          +LF +MA+ GI 
Sbjct: 377 SSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIV 436

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
            N    NIL+ A  K+G++ +A+    E+          DV+T + L+ ++ + G    A
Sbjct: 437 ANCHCFNILISAHAKRGMMDEAMLVFTEMQGQG---VRPDVVTYSTLISAFCRMGRLADA 493

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF------------- 327
           +  ++ M    ++ + V Y+ LI+GFC++GD+  A     +M+ +G              
Sbjct: 494 MEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIH 553

Query: 328 -----------------------LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
                                   P ++T+N+L++  C  GK+++A      +   G+ P
Sbjct: 554 SLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEP 613

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D ++Y T++ G C  G I         ML K V P    +++++DG    G  S A  + 
Sbjct: 614 DVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMF 673

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL-------------------------- 458
             M+  G + ++ T+  L+    R     +A +L                          
Sbjct: 674 HEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKV 733

Query: 459 -KKEMLLD--------GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
            ++E   D        G+ P+V TY ++I      G +  A  ++  M + G  P     
Sbjct: 734 RRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLL 793

Query: 510 TELIKGHCARGNMKEAEEVFAKI 532
            ++I+    +G++ +A    +K+
Sbjct: 794 NDIIRMLLQKGDIVKAGYYMSKV 816



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 4/156 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ LC       A+ L  K+       D+   N ++N L K+   E+A+ +   +S   
Sbjct: 691 LLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSG 750

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN +TY   I    +   +++A  +FS+M  +G  P+    N ++  L +K   GD V
Sbjct: 751 LVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQK---GDIV 807

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
           K  G  ++  DG   S   ++T L+ S F +  K +
Sbjct: 808 K-AGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHR 842



 Score = 38.5 bits (88), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 47/99 (47%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VP+V T+  +++ L K G +E+AD +   M +   +P+    N  I    +  ++ KA
Sbjct: 750 GLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 809

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
            +  S +    I     T ++L+     KG   + +KFL
Sbjct: 810 GYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKFL 848


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 244/495 (49%), Gaps = 33/495 (6%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
           G +    + + R    +I   C    +G AL L  +M ++  VP  +++  ++N LC   
Sbjct: 304 GMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK 363

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           DL  A+ ++ +M+     PN   Y+  I GY     +++A  L   M+ +G+ P+   +N
Sbjct: 364 DLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYN 423

Query: 228 ILVHALCK----------------KGLLGDAVKFLGEVLA-DDDGKATSDV--------- 261
            ++  L K                +GL  DAV F   +L     GK T            
Sbjct: 424 AIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDH 483

Query: 262 ------ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
                    T+L++ +FK G+  +AL+++  +    +  D+   +  I+G   NG +  A
Sbjct: 484 GLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEA 543

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F ++ ++G +PDV TY++L++  CKQG++++A   +  +   G+AP+   Y  ++ G
Sbjct: 544 LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDG 603

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           LC  GDI +AR+    M EK + P+   ++ +IDGY +  +++ AFS+   M S GV  +
Sbjct: 604 LCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 663

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
            F +NAL+    + G +  A +L +EML  G F    ++N LI   C    I  A QL+ 
Sbjct: 664 SFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQ 722

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
           EM+ + I PD +TYT +I  HC  G M+EA  +F ++Q   L +D + +  L   Y ++ 
Sbjct: 723 EMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLG 782

Query: 556 ESDKARDIHQKWLLR 570
           +S +   + +K + +
Sbjct: 783 QSSEVFALFEKMVAK 797



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 213/410 (51%), Gaps = 4/410 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G +  AL + R +   G +PDV T +  ++ L K G +++A  V  E+ E    P+  T
Sbjct: 502 AGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 561

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y++ I+G+C+  E++KA  L   M   GI PN   +N LV  LCK G +  A K    + 
Sbjct: 562 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM- 620

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
              +     D +T + ++D Y K+ +  +A +L+++M  K +Q     YN L++G C  G
Sbjct: 621 --PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 678

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           D+  A   F +ML++GF    +++NTL++  CK  K+ EAS  +  +    + PD ++Y 
Sbjct: 679 DMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 737

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T+I   C  G + +A      M E++++ +   +  ++ GY + G  S  F++ + M++ 
Sbjct: 738 TVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK 797

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV  +  T+  +I A  +  ++ +AF L+ E++  G+      ++LLI A C    +  A
Sbjct: 798 GVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 857

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            +L DEM   G+ P +   + L++     G M EA  VF  +++LGL  D
Sbjct: 858 SKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 907



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 228/470 (48%), Gaps = 8/470 (1%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
            + M+ TG     L+ DY    A+I      G I   L ++  M+  G   +++T+N L+
Sbjct: 232 FEEMQKTG-----LKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLI 286

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           + LCK G +EKA  +++ M  +   PN  T+   I GYCR + + +AL L   M    + 
Sbjct: 287 HGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLV 346

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P+ V++  +++ LC    L  A K L ++     G   + V+ ST++M  Y   G   +A
Sbjct: 347 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFS--GLKPNVVVYSTLIM-GYASEGRIEEA 403

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
             L + M    +  DI  YN +I+     G +  A  Y  ++  RG  PD +T+   +  
Sbjct: 404 RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG 463

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
             K GK+ EA+ ++  +   G+ P+   Y  +I G    G++++A      +    V+P+
Sbjct: 464 YSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPD 523

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
               +  I G  + G +  A  +   +   G+  +VFT+++LI    + G +  AF L  
Sbjct: 524 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHD 583

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           EM L GI P++F YN L+   C  G I  A +L+D M  +G+ PD +TY+ +I G+C   
Sbjct: 584 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 643

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           N+ EA  +F ++ + G+      +  L     +  + +KA ++ ++ L +
Sbjct: 644 NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK 693



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 216/445 (48%), Gaps = 38/445 (8%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R M +KG VP+  T+  +   LC+   + +A     EM +    P+    +A I G+ R 
Sbjct: 198 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMRE 257

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            ++D+ L +   M + GI  N +T+N+L+H LCK G +  A + L  ++         + 
Sbjct: 258 GDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLG---CKPNS 314

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
            T  +L++ Y +  +  +AL L ++M ++N+    V+Y  +ING C   D+S A     +
Sbjct: 315 RTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 374

Query: 322 MLKRGFLPDVITYNTL-----------------------------------LNCLCKQGK 346
           M   G  P+V+ Y+TL                                   ++CL K GK
Sbjct: 375 MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 434

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           ++EAS +   +   G+ PD +++   I G    G + +A ++   ML+  ++P   ++ V
Sbjct: 435 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 494

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +I+G+ + G+L  A SI   + + GV  +V T +A I    + G + +A  +  E+   G
Sbjct: 495 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 554

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           + PDVFTY+ LI   C  G +  A +L+DEM  +GI P+I  Y  L+ G C  G+++ A 
Sbjct: 555 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 614

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRY 551
           ++F  +   GL  D + +  +   Y
Sbjct: 615 KLFDGMPEKGLEPDSVTYSTMIDGY 639



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 216/434 (49%), Gaps = 4/434 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A     +M+  G +P+   +  L+N   K G+L +A  + R +  +   P+  T 
Sbjct: 468 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 527

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +AFI G  +   + +AL +FS +   G+ P+  T++ L+   CK+G +  A +   E+  
Sbjct: 528 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 587

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   ++     L+D   K+GD  +A  L++ M +K ++ D V Y+ +I+G+C + +
Sbjct: 588 KG---IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN 644

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           ++ AF+ F +M  +G  P    YN L++  CK+G +++A + +  + + G A   +S+ T
Sbjct: 645 VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNT 703

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G C    I +A +    M+ K ++P+   +  +ID + + G +  A  +   M    
Sbjct: 704 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERN 763

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  +  T+ +L+    + G   + F+L ++M+  G+ PD  TY L+I A C   ++  A 
Sbjct: 764 LIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAF 823

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +L DE++ +G+      +  LI   C R ++ EA ++  ++  LGL         L + +
Sbjct: 824 KLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSF 883

Query: 552 RRMKESDKARDIHQ 565
               + D+A  + +
Sbjct: 884 HEAGKMDEATRVFE 897



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 177/401 (44%), Gaps = 36/401 (8%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E L     +++ G V      D   + ++I   C  G++  A  L  +M  KG  P++
Sbjct: 540 VQEALKVFSELKEKGLV-----PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 594

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
             +N LV+ LCK GD+++A  +   M E    P+  TY+  I GYC+   + +A  LF  
Sbjct: 595 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 654

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD-----------DGKATS--- 259
           M + G++P+   +N LVH  CK+G +  A+    E+L              DG   S   
Sbjct: 655 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKI 714

Query: 260 -----------------DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                            D +T T ++D + K G   +A  L+ +M ++N+  D V Y  L
Sbjct: 715 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 774

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + G+   G  S  FA F +M+ +G  PD +TY  ++   CK+  L EA      +   G+
Sbjct: 775 MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 834

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
                 +  +I  LC   D+ +A + L  M E  + P     + ++  +   G +  A  
Sbjct: 835 LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATR 894

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           + + + S G+  +  T   L+          DA +L K+++
Sbjct: 895 VFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 3/279 (1%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +K +  +   Y ++  G C    ++ A   F +M K G  PD    + L++   ++G 
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           +DE      V+   G+  + I+Y  +I GLC  G + KA E L  M+     P    + +
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +I+GY R  ++  A  + D M    +  +  ++ A+I        +  A  L ++M   G
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           + P+V  Y+ LI    + G I  A +L D M   G+ PDI  Y  +I      G M+EA 
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 439

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYR---RMKESDKARD 562
               +IQ  GL  D + F      Y    +M E+ K  D
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFD 478



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 18/248 (7%)

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGV------------------LSKTGVAPDQISYKTII 373
           + ++ L++   + G LDEA++ + V                  + + G+ P+  +Y  I 
Sbjct: 157 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIIT 216

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            GLC    + +A+     M +  + P+ +  + +IDG+ R GD+     I+D+M+S G+ 
Sbjct: 217 AGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIP 276

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            N+ T+N LI    + G +  A  + K M+  G  P+  T+ LLI   C   ++  AL+L
Sbjct: 277 INLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALEL 336

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
            DEM +R + P  ++Y  +I G C   ++  A ++  K+   GL  + + +  L   Y  
Sbjct: 337 LDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYAS 396

Query: 554 MKESDKAR 561
               ++AR
Sbjct: 397 EGRIEEAR 404



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 18/189 (9%)

Query: 401 PHIWNVIIDGYGRCGDLSNAFSI------RDLMLSF------------GVSSNVFTFNAL 442
           P +++++ID Y R G L  A ++        +++S             G+  N +T+  +
Sbjct: 156 PVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTII 215

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
                R   + +A    +EM   G+ PD    + LI      G I   L++ D M+  GI
Sbjct: 216 TAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGI 275

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             ++ITY  LI G C  G M++A E+   + TLG   +   F +L + Y R     +A +
Sbjct: 276 PINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALE 335

Query: 563 IHQKWLLRN 571
           +  +   RN
Sbjct: 336 LLDEMEKRN 344


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 216/421 (51%), Gaps = 3/421 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++   C   ++G  L L  ++ +KG  P+  T+N +++ LCK G + +A+ V+
Sbjct: 286 DVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVL 345

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           R M   R  P+   Y   I+G+ +   +     LF  M    I P+ VT+  ++H LC+ 
Sbjct: 346 RVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQA 405

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A K   E+L+        D +T T L+D Y K G+  +A +L N M +K +  ++
Sbjct: 406 GKVVEARKLFSEMLSKG---LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNV 462

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  L++G C  G++  A     +M ++G  P+V TYN L+N LCK G +++A      
Sbjct: 463 VTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEE 522

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G  PD I+Y TI+   C  G++ KA E L  ML+K + P    +NV+++G+   G 
Sbjct: 523 MDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGM 582

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L +   +   ML  G+  N  TFN+L+       ++     + K M   G+ PD  TYN+
Sbjct: 583 LEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNI 642

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C   ++  A  L+ EM+ +G +    +Y  LIKG   R   +EA ++F +++T G
Sbjct: 643 LIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHG 702

Query: 537 L 537
            
Sbjct: 703 F 703



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 229/443 (51%), Gaps = 3/443 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  GK+  A  L  +M  +G VPDV++++ +V+  C++  L K   ++ E+    
Sbjct: 258 ILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKG 317

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYN+ I+  C+   + +A  +   M N  I P+ V +  L+    K G +    
Sbjct: 318 LKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEY 377

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K   E+      K   D +T T ++    + G   +A  L+++M  K ++ D V Y  LI
Sbjct: 378 KLFDEM---KRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALI 434

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+C  G++  AF+   QM+++G  P+V+TY  L++ LCK G++D A+     +S+ G+ 
Sbjct: 435 DGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQ 494

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+  +Y  +I GLC  G+I +A + +  M      P+   +  I+D Y + G+++ A  +
Sbjct: 495 PNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHEL 554

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
             +ML  G+   + TFN L+      G + D   L K ML  GI P+  T+N L+   C 
Sbjct: 555 LRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCI 614

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
             ++   +++Y  M  +G+ PD  TY  LIKGHC   NMKEA  +  ++   G ++    
Sbjct: 615 RNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAAS 674

Query: 544 FRILKKRYRRMKESDKARDIHQK 566
           +  L K + + K+ ++AR + ++
Sbjct: 675 YNSLIKGFYKRKKFEEARKLFEE 697



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 200/418 (47%), Gaps = 3/418 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L+ +   + ++I  LC  G++  A  + R M  +   PD + +  L++   K G++ 
Sbjct: 315 RKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVS 374

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
               +  EM   +  P+  TY + I G C+  ++ +A  LFS M + G++P+ VT+  L+
Sbjct: 375 VEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALI 434

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
              CK G + +A     +++   +   T +V+T T L+D   K G+   A  L ++M +K
Sbjct: 435 DGYCKAGEMKEAFSLHNQMV---EKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEK 491

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            +Q ++  YN LING C  G+I  A     +M   GF PD ITY T+++  CK G++ +A
Sbjct: 492 GLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKA 551

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                ++   G+ P  +++  ++ G C+ G +      +  ML+K ++P    +N ++  
Sbjct: 552 HELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQ 611

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           Y    ++     I   M + GV  +  T+N LI    +  ++ +A+ L KEM+  G    
Sbjct: 612 YCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLT 671

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
             +YN LI           A +L++EM   G   +   Y   +  +   GN +   E+
Sbjct: 672 AASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLEL 729



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 181/380 (47%), Gaps = 3/380 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I      G +     L  +M +K  VPD +T+  +++ LC+ G + +A  +  EM 
Sbjct: 360 YTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEML 419

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  TY A I GYC+  E+ +A  L + M   G+ PN VT+  LV  LCK G + 
Sbjct: 420 SKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVD 479

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A + L E+    +     +V T   L++   K G+  QA+ L  +M       D + Y 
Sbjct: 480 IANELLHEM---SEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYT 536

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +++ +C  G+++ A      ML +G  P ++T+N L+N  C  G L++       +   
Sbjct: 537 TIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDK 596

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+  ++ ++++  CI  ++    E    M  + VVP+ + +N++I G+ +  ++  A
Sbjct: 597 GIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEA 656

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           + +   M+  G S    ++N+LI    +     +A  L +EM   G   +   Y++ +  
Sbjct: 657 WFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDV 716

Query: 481 SCNLGHIHLALQLYDEMLRR 500
           +   G+    L+L DE + +
Sbjct: 717 NYEEGNWENTLELCDEAIEK 736



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 155/314 (49%), Gaps = 7/314 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   + A+I   C  G++  A  L  +M++KG  P+V+T+  LV+ LCK G+++ A+
Sbjct: 423 LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIAN 482

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EMSE    PN  TYNA I G C+V  +++A+ L   M   G  P+ +T+  ++ A 
Sbjct: 483 ELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAY 542

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG--DKFQALALWNDMFQKN 291
           CK G +  A + L  +L   D      ++T  +LM+ +  +G  +  + L  W  M  K 
Sbjct: 543 CKMGEMAKAHELLRIML---DKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKW--MLDKG 597

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           I  +   +N L+  +C+  ++ +    +  M  +G +PD  TYN L+   CK   + EA 
Sbjct: 598 IMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAW 657

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
             +  + + G +    SY ++I+G        +AR+    M     + E  I+++ +D  
Sbjct: 658 FLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVN 717

Query: 412 GRCGDLSNAFSIRD 425
              G+  N   + D
Sbjct: 718 YEEGNWENTLELCD 731



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 169/329 (51%), Gaps = 6/329 (1%)

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L  T  + G  P  +  ++    L + GLL +A K   ++L  + G   S V +  + + 
Sbjct: 170 LIYTYKDWGAHP--LVFDVFFQVLVEAGLLLEAGKLFDKLL--NYGVLVS-VDSCNLFLA 224

Query: 270 SYFKNGDKFQ-ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
               + D  + A  ++ +  +  +  + V+YN++++  C  G +  A +   QM  RG +
Sbjct: 225 RLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNV 284

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           PDV++Y+ +++  C+  +L +       L + G+ P+Q +Y +II  LC  G +V+A + 
Sbjct: 285 PDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQV 344

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  M  + + P+  ++  +I G+G+ G++S  + + D M    +  +  T+ ++I    +
Sbjct: 345 LRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQ 404

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G + +A  L  EML  G+ PD  TY  LI   C  G +  A  L+++M+ +G+TP+++T
Sbjct: 405 AGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVT 464

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           YT L+ G C  G +  A E+  ++   GL
Sbjct: 465 YTALVDGLCKCGEVDIANELLHEMSEKGL 493



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 3/278 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++  LC  G++  A  L  +M +KG  P+V T+N L+N LCK+G++E+A  ++ EM 
Sbjct: 465 YTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMD 524

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  TY   +  YC++ E+ KA  L   M + G++P  VT N+L++  C  G+L 
Sbjct: 525 LAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLE 584

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           D  + +  +L   D     +  T   LM  Y    +    + ++  M  + +  D   YN
Sbjct: 585 DGERLIKWML---DKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYN 641

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI G C   ++  A+    +M+++GF     +YN+L+    K+ K +EA   +  +   
Sbjct: 642 ILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTH 701

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           G   ++  Y   +      G+     E     +EK +V
Sbjct: 702 GFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCLV 739



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 1/271 (0%)

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ-GKLDEASHFYG 355
           + ++V        G +  A   F ++L  G L  V + N  L  L      +  A   + 
Sbjct: 182 LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFR 241

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
             S+ GV  + +SY  I+  LC  G + +A   L+ M  +  VP+   ++VI+DGY +  
Sbjct: 242 EYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVE 301

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            L     + + +   G+  N +T+N++I    + G + +A  + + M    IFPD   Y 
Sbjct: 302 QLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYT 361

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            LI      G++ +  +L+DEM R+ I PD +TYT +I G C  G + EA ++F+++ + 
Sbjct: 362 TLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSK 421

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           GL  D + +  L   Y +  E  +A  +H +
Sbjct: 422 GLKPDEVTYTALIDGYCKAGEMKEAFSLHNQ 452


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 235/460 (51%), Gaps = 4/460 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           RC    D   H  ++      G    A+ L   M+ KG  P ++T+N ++  LC+ G  +
Sbjct: 185 RCVF-PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWD 243

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           KA  V +EM +   +P+  ++   I G+CRV E+++AL ++  M + GI+P+ V+ + L+
Sbjct: 244 KAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI 303

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
               ++G +  A+ +L E+          D +  T+++  + + G    AL + ++M   
Sbjct: 304 GLFARRGKMDHAMAYLREMRC---FGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC 360

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
               D+V YN L+NG C    +  A     +M +RG  PD+ T+ TL++  C +GKLD+A
Sbjct: 361 GCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKA 420

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +  +    + PD ++Y T+I G+C  GD+ KA +    M  + + P    ++++ID 
Sbjct: 421 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS 480

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           +   G + +AF   D M++ G+  N+ T+N++I    R G++       ++M+++ + PD
Sbjct: 481 HCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 540

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           + TYN LI        +H A +L + M +  + PD++TY  LI G    GN++EA  +F 
Sbjct: 541 LITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE 600

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           K+   G+  D   +  +   +     S +A  +H + L R
Sbjct: 601 KMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 640



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 209/405 (51%), Gaps = 3/405 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M ++   PDV+THN +V+   + GD E A  ++  M      P   TYN+ + G CR  
Sbjct: 181 EMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSG 240

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
             DKA  +F  M + G+ P+  +  IL+   C+ G + +A+K   E+          D++
Sbjct: 241 MWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG---IKPDLV 297

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           + + L+  + + G    A+A   +M    +  D V Y ++I GFC  G +S A     +M
Sbjct: 298 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 357

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           +  G LPDV+TYNTLLN LCK+ +L +A      + + GV PD  ++ T+I G CI G +
Sbjct: 358 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 417

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA +   +ML + + P+   +N +IDG  R GDL  A  + D M S  +  N  T++ L
Sbjct: 418 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 477

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I +    G + DAF    EM+  GI P++ TYN +I   C  G++    +   +M+   +
Sbjct: 478 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 537

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +PD+ITY  LI G+     M +A ++   ++   +  D + + +L
Sbjct: 538 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNML 582



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 177/329 (53%), Gaps = 9/329 (2%)

Query: 222 NRVTHNILVHALCKKGLLGDAVKF--LGEVLADDDGKAT-SDVITSTILMDSYFKNGDKF 278
           N  T NI+VH  CK      A++F  +  V+++ + +    DV+T  +++D+ F+ GD  
Sbjct: 155 NTYTLNIMVHNYCK------ALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAE 208

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
            A+AL + M  K ++  IV YN ++ G C +G    A+  F +M   G  PDV ++  L+
Sbjct: 209 AAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILI 268

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
              C+ G+++EA   Y  +   G+ PD +S+  +I      G +  A  +L  M    +V
Sbjct: 269 GGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLV 328

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P+  I+ ++I G+ R G +S+A  +RD M+  G   +V T+N L+    +   + DA  L
Sbjct: 329 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 388

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
             EM   G+ PD+ T+  LI   C  G +  ALQL+D ML + + PDI+TY  LI G C 
Sbjct: 389 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 448

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +G++ +A +++  + +  +  +H+ + IL
Sbjct: 449 QGDLDKANDLWDDMHSREIFPNHVTYSIL 477



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 187/385 (48%), Gaps = 13/385 (3%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG---LLG 240
           P+P    ++  I  Y +  +  +A   F  + ++ +       N L+ AL + G   L  
Sbjct: 82  PTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAA 141

Query: 241 DAVKFLGEVLADDDGKATSDVITST--ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           DA + +          + S+V T T  I++ +Y K  +  +  A+ ++M ++ +  D+V 
Sbjct: 142 DAYRLVFS--------SNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVT 193

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           +NV+++     GD  +A A    M+ +G  P ++TYN++L  LC+ G  D+A   +  + 
Sbjct: 194 HNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 253

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             GVAPD  S+  +I G C  G+I +A +    M  + + P+   ++ +I  + R G + 
Sbjct: 254 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 313

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           +A +    M  FG+  +   +  +I    R G + DA  ++ EM+  G  PDV TYN L+
Sbjct: 314 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLL 373

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C    +  A  L +EM  RG+ PD+ T+T LI G+C  G + +A ++F  +    L 
Sbjct: 374 NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 433

Query: 539 IDHIPFRILKKRYRRMKESDKARDI 563
            D + +  L     R  + DKA D+
Sbjct: 434 PDIVTYNTLIDGMCRQGDLDKANDL 458



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 146/315 (46%), Gaps = 38/315 (12%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  VI   C  G +  AL +R +M+  G +PDV+T+N L+N LCK   L  A+ ++ EM 
Sbjct: 334 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR 393

Query: 181 E-----------------------------------MRPSPNCATYNAFITGYCRVNELD 205
           E                                    R  P+  TYN  I G CR  +LD
Sbjct: 394 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLD 453

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           KA  L+  M +  I PN VT++IL+ + C+KG + DA  FL E++   +     +++T  
Sbjct: 454 KANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI---NKGILPNIMTYN 510

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            ++  Y ++G+  +       M    +  D++ YN LI+G+     +  AF     M K 
Sbjct: 511 SIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKE 570

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
              PDV+TYN L+N     G + EA   +  +   G+ PD+ +Y ++I G    G+  +A
Sbjct: 571 KVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEA 630

Query: 386 REFLLSMLEKSVVPE 400
            +    ML++   P+
Sbjct: 631 FQLHDEMLQRGFAPD 645



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 35/216 (16%)

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV------------- 432
           RE + S+L  S  P+P +++++I  Y +      AF    L+L   V             
Sbjct: 71  REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA 130

Query: 433 ----------------------SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
                                   N +T N ++    +        ++  EM    +FPD
Sbjct: 131 LSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 190

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V T+N+++ A    G    A+ L D M+ +G+ P I+TY  ++KG C  G   +A EVF 
Sbjct: 191 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK 250

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           ++   G+A D   F IL   + R+ E ++A  I+++
Sbjct: 251 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKE 286


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 226/447 (50%), Gaps = 3/447 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+  +  + A+I      G  G A  ++ +M+ +G   ++ T+N LV  +CK GD+EKAD
Sbjct: 337 LKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKAD 396

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM  +   P+  TYN  I GY +     +   L S M  + + P   T  ++++ L
Sbjct: 397 ALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGL 456

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C+ G + DA +   E++     K   + +  T L+  + + G   +A+ +   M +K +Q
Sbjct: 457 CRHGSIEDASRVF-EIMVSLGVKP--NAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQ 513

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D++ YN +I G C +  +  A  Y  +M++RG  P+V TY  L++  CK G++  A  +
Sbjct: 514 PDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRY 573

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  +   G+AP+ +    +I G C  G   +A      ML +SV P+   ++ +I G  R
Sbjct: 574 FKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLR 633

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G L  A  +    L  G+  +VFT+N++I    + G I  AF L + M   GI P++ T
Sbjct: 634 NGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIIT 693

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN LI   C  G I  A +L+D +  +G+  + +TY  +I G+C  GN+ +A  +F ++ 
Sbjct: 694 YNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMT 753

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKA 560
             G+  D   +  L    R+   ++KA
Sbjct: 754 LKGVPPDSFVYSALIDGCRKEGNTEKA 780



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 220/443 (49%), Gaps = 6/443 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+     G+   A+ + + M +KG  PDVL +N ++  LCK   +E+A   + EM 
Sbjct: 484 YTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMI 543

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TY A I GYC+  E+  A   F  M   GI PN V    L+   CK+G   
Sbjct: 544 ERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTT 603

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A      +L         DV T + L+    +NG    A+ L ++  +K +  D+  YN
Sbjct: 604 EATSIFRCMLGRS---VHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYN 660

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I+GFC  G I  AF     M ++G  P++ITYN L+N LCK G+++ A   +  +   
Sbjct: 661 SIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGK 720

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+A + ++Y TII G C  G++ KA      M  K V P+  +++ +IDG  + G+   A
Sbjct: 721 GLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKA 780

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
            S+    +  G +S   + NAL+    + G + +A  L ++M+   + PD  TY +LI  
Sbjct: 781 LSLFLESVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDY 839

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  G +  A Q + +M +R + P+ +TYT L+ G+   G   E   +F ++    +  D
Sbjct: 840 HCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPD 899

Query: 541 HIPFRILKKRYRRMKESDKARDI 563
            + + ++   +  +KE D  + +
Sbjct: 900 GVTWSVMIDAH--LKEGDHVKTL 920



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 224/482 (46%), Gaps = 38/482 (7%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC  G++  A  L++ M +KG V DV T++ L++   K     +A  ++ EM    
Sbjct: 277 VIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKG 336

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P    Y A I G+ R  +  +A  +   M   G++ N  T+N LV  +CK G +  A 
Sbjct: 337 LKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKAD 396

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E++         D  T   +++ Y K  +  +   L ++M + N+        ++I
Sbjct: 397 ALLNEMIMVG---IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMII 453

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C +G I  A   F  M+  G  P+ + Y TL+    ++G+  EA     V+ K GV 
Sbjct: 454 NGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQ 513

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL------ 417
           PD + Y ++I GLC    + +A+++L+ M+E+ + P  + +  +I GY + G++      
Sbjct: 514 PDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRY 573

Query: 418 -----------------------------SNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
                                        + A SI   ML   V  +V T++ALI    R
Sbjct: 574 FKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLR 633

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +  A  L  E L  G+ PDVFTYN +I   C  G I  A QL++ M ++GI+P+IIT
Sbjct: 634 NGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIIT 693

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           Y  LI G C  G ++ A E+F  I   GLA + + +  +   Y +     KA  +  +  
Sbjct: 694 YNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMT 753

Query: 569 LR 570
           L+
Sbjct: 754 LK 755



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 203/426 (47%), Gaps = 3/426 (0%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           + G V  +L  N L+++L K   LE        M E     +  TY   I  + R     
Sbjct: 194 RNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAK 253

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +   L   M   G  P+ VT+N+++  LC+ G + +A +   + L D  G   +DV T +
Sbjct: 254 EGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFEL--KKLMDKKG-LVADVFTYS 310

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           IL+D + K     +A  +  +MF K ++   VAY  LI+GF   GD   AF    +ML R
Sbjct: 311 ILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLAR 370

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G   ++ TYN L+  +CK G +++A      +   G+ PD  +Y  +I+G     +  + 
Sbjct: 371 GVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRV 430

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           ++ L  M + ++VP  +   +II+G  R G + +A  + ++M+S GV  N   +  LI  
Sbjct: 431 KDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKG 490

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G   +A  + K M   G+ PDV  YN +I   C    +  A     EM+ RG+ P+
Sbjct: 491 HVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPN 550

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           + TY  LI G+C  G M+ A+  F ++   G+A + +    L   Y +   + +A  I +
Sbjct: 551 VYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFR 610

Query: 566 KWLLRN 571
             L R+
Sbjct: 611 CMLGRS 616



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 195/417 (46%), Gaps = 12/417 (2%)

Query: 103  TMRDTGPVRCTL----ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
            T   T   RC L      D R + A+I  L   GK+  A+ L  + ++KG VPDV T+N 
Sbjct: 602  TTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNS 661

Query: 159  LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
            +++  CK G + KA  +   M +   SPN  TYNA I G C+  E+++A  LF  +   G
Sbjct: 662  IISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKG 721

Query: 219  IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
            +  N VT+  ++   CK G L  A +   E+          D    + L+D   K G+  
Sbjct: 722  LAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKG---VPPDSFVYSALIDGCRKEGNTE 778

Query: 279  QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
            +AL+L+ +  QK   +   + N L++GFC +G +  A      M+ +   PD +TY  L+
Sbjct: 779  KALSLFLESVQKGFAS-TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILI 837

Query: 339  NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
            +  CK G L EA  F+  + K  + P+ ++Y  ++ G  + G   +       M+ K + 
Sbjct: 838  DYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIE 897

Query: 399  PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG--VSSNVFTFNALILAETRGGSIFDAF 456
            P+   W+V+ID + + GD      + D ML  G  VS NV   + LI    R   + +  
Sbjct: 898  PDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNV--CHVLIDPLCRKEHVSEVL 955

Query: 457  SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
             + +++   G+   + T + L+      G +  A ++   M+R    PD     +LI
Sbjct: 956  KVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 133/268 (49%)

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           +L+D Y K G   +A++ +    +      ++  N L++       +   + ++  ML+ 
Sbjct: 171 LLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEA 230

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
             L DV TY  L+N   + G   E       + + G +P  ++Y  +I GLC  G++ +A
Sbjct: 231 NVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEA 290

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E    M +K +V +   ++++IDG+G+    + A  + + M S G+      + ALI  
Sbjct: 291 FELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDG 350

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             R G   +AF +K+EML  G+  ++FTYN L+   C  G +  A  L +EM+  GI PD
Sbjct: 351 FMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPD 410

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQ 533
             TY  +I+G+    N    +++ ++++
Sbjct: 411 TQTYNNMIEGYLKEQNTSRVKDLLSEMK 438



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 7/219 (3%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            A++   C  GK+  A  L   M+ K   PD +T+  L++  CK G L++A+    +M + 
Sbjct: 800  ALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKR 859

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               PN  TY A ++GY       +   LF  M    I P+ VT ++++ A  K+G   D 
Sbjct: 860  NLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEG---DH 916

Query: 243  VKFLGEVLADDDGKATSDVITST--ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            VK L   L DD  K   +V  +   +L+D   +     + L +   + ++ +   +   +
Sbjct: 917  VKTLK--LVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCS 974

Query: 301  VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
             L+  F   G +  A      M++  ++PD    N L+N
Sbjct: 975  TLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLIN 1013



 Score = 39.3 bits (90), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 53/128 (41%)

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            F  LI    + G   +A S       +G    +   N L+        + L  + Y+ M
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGM 227

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
           L   +  D+ TYT LI  H   GN KE + +  +++  G +   + + ++     R  E 
Sbjct: 228 LEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEV 287

Query: 558 DKARDIHQ 565
           D+A ++ +
Sbjct: 288 DEAFELKK 295


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 233/490 (47%), Gaps = 50/490 (10%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L+     +  ++  LC  G++  A  L+ +M Q G  P V+T   L+N L +     
Sbjct: 39  RAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFG 98

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +   V++EM ++  SPN   YN  I  +CR     +AL LF  M    ++P  VT+N++ 
Sbjct: 99  EVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIA 158

Query: 231 HALCKKGLLGDAVKFLGEVLA------------------------DDDGKATSDVITS-- 264
            ALCK+G +  A + L ++L+                        +     T++++T   
Sbjct: 159 KALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGM 218

Query: 265 -------TILMDSYFKNGDKFQALALW-----------------NDMFQKNIQTDIVAYN 300
                  T  M    K G   +A+ +W                   M  K I+ D + YN
Sbjct: 219 RPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYN 278

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           ++I G C +  +  A      M +RGF PD+ T+NTLL+  C  GK++E  H    +   
Sbjct: 279 IMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTE 338

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ PD +SY TII G C   DI KA+E+L  ++++ + P   I+N +I GYGR GD+S A
Sbjct: 339 GLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGA 398

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
               + M S G+     T+ +L+      G + +A ++  +   + +   V  Y ++I  
Sbjct: 399 IDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQG 458

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C LG +  A+  ++EM  RGI+P+ +TYT L+  +   GN +EA ++F ++   G+  D
Sbjct: 459 YCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPD 518

Query: 541 HIPFRILKKR 550
           +I +  L  R
Sbjct: 519 NITYGTLIAR 528



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 181/398 (45%), Gaps = 33/398 (8%)

Query: 182 MRPSPNCA----TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           MR S N A    +Y A I   C+  ++D    + + +   G++P  VT+N+L+ ALCK G
Sbjct: 1   MRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSG 60

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL-WNDMFQKNIQTDI 296
            + +A +  G +   + G  T  V+T  IL++     G++F  + +   +M Q  +  + 
Sbjct: 61  RVEEAFRLKGRM---EQGGMTPSVVTFGILING-LARGERFGEVGIVLQEMEQLGVSPNE 116

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YN LI   C  G  S A   F +M+ +   P  +TYN +   LCK+G+++ A      
Sbjct: 117 VIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILED 176

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS----MLEKSVVPEPHIWNVIIDGYG 412
           +   G+      + T++  L       +  E ++S    M+ + + P   +    +    
Sbjct: 177 MLSIGMTVHCGLFNTVVAWLL---QRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELC 233

Query: 413 RCGD-----------------LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
           + G                  +  A  +   ML+ G+  +  T+N +I    +   + +A
Sbjct: 234 KGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEA 293

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             L  +M   G  PD+FT+N L+ A CNLG +     L D+M   G+ PDI++Y  +I G
Sbjct: 294 IKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDG 353

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           HC   ++++A+E   ++   GL  +   +  L   Y R
Sbjct: 354 HCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGR 391



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 176/408 (43%), Gaps = 57/408 (13%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G    AL L  +M+ K   P  +T+N +   LCK G++E+A+ ++ +M  +  + +C
Sbjct: 127 CRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHC 186

Query: 189 ATYNA---------------------FITGYCRVNE------------------------ 203
             +N                       +T   R N+                        
Sbjct: 187 GLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWF 246

Query: 204 --------LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
                   + +A  +  TM N GI  + +T+NI++   CK   + +A+K  G++      
Sbjct: 247 KTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRG-- 304

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               D+ T   L+ +Y   G   +   L + M  + +Q DIV+Y  +I+G C   DI  A
Sbjct: 305 -FKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKA 363

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
             Y  +++ RG  P+V  YN L+    + G +  A      +   G+ P  ++Y +++  
Sbjct: 364 KEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYW 423

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           +C  G + +A+       E +V      + ++I GY + G +  A +  + M S G+S N
Sbjct: 424 MCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPN 483

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
             T+  L+ A ++ G+  +A  L  EM+  G+ PD  TY  LI A C+
Sbjct: 484 KLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI-ARCS 530



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 141/280 (50%), Gaps = 8/280 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           +KE    ++TM + G     +E D   +  +IR  C   K+  A+ L   M ++G  PD+
Sbjct: 255 MKEATKVIQTMLNKG-----IELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDL 309

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T N L++  C +G +E+  H++ +M      P+  +Y   I G+C+  ++ KA    + 
Sbjct: 310 FTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTE 369

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           + + G++PN   +N L+    + G +  A+  + E +  +  + T+  +T   LM     
Sbjct: 370 LMDRGLKPNVFIYNALIGGYGRNGDISGAIDAV-ETMKSNGIQPTN--VTYGSLMYWMCH 426

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +A  +++   + N+   ++ Y ++I G+C  G +  A AYF +M  RG  P+ +T
Sbjct: 427 AGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLT 486

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
           Y TL+    K G  +EAS  +  +  +GV PD I+Y T+I
Sbjct: 487 YTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 4/219 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  GK+     L  +M  +G  PD++++  +++  CK  D+ KA   + E+ +    PN 
Sbjct: 320 CNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNV 379

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             YNA I GY R  ++  A+    TM +NGI+P  VT+  L++ +C  GL+ +A     +
Sbjct: 380 FIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQ 439

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
              ++       VI  TI++  Y K G   +A+A + +M  + I  + + Y  L+  +  
Sbjct: 440 ARENN---VDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSK 496

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLL-NCLCKQGK 346
           +G+   A   F +M+  G +PD ITY TL+  C  K GK
Sbjct: 497 SGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKGGK 535



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/293 (22%), Positives = 129/293 (44%), Gaps = 18/293 (6%)

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           +N+  +  +Y  +I   C  G + + F    ++ + G  P V+TYN L++ LCK G+++E
Sbjct: 5   RNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEE 64

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A    G + + G+ P  +++  +I GL       +    L  M +  V P   I+N +I 
Sbjct: 65  AFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIG 124

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
            + R G  S A  + D M+   +     T+N +  A  + G +  A  + ++ML  G+  
Sbjct: 125 WHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTV 184

Query: 470 DVFTYNLLIGASCN-LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN------- 521
               +N ++         +   + + +EM+ RG+ P+    T  ++  C  G        
Sbjct: 185 HCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGI 244

Query: 522 ----------MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
                     MKEA +V   +   G+ +D I + I+ +   +  + ++A  +H
Sbjct: 245 WFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLH 297



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/223 (21%), Positives = 95/223 (42%), Gaps = 30/223 (13%)

Query: 98  LDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           +D ++TM+  G  P   T       + +++  +C  G +  A  +  +  +      V+ 
Sbjct: 399 IDAVETMKSNGIQPTNVT-------YGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIG 451

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +  ++   CK+G + +A     EM     SPN  TY   +  Y +    ++A  LF  M 
Sbjct: 452 YTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMV 511

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
            +G+ P+ +T+  L+    +KG  G   ++  E+  D      S ++++  +MD+    G
Sbjct: 512 GSGVIPDNITYGTLIARCSEKG--GKTTQYGQELHCD-----LSKLLSADWIMDTQVHFG 564

Query: 276 DKFQAL--------ALW------NDMFQKNIQTDIVAYNVLIN 304
            + + L        A W      +  FQK+ Q  + A  V+ N
Sbjct: 565 HQLKHLESQCMDDNARWLLNHNTSCKFQKDCQHTMAAQCVVGN 607


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 222/425 (52%), Gaps = 7/425 (1%)

Query: 114 LETDYR----RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +E  YR        +I  L L  K   A+ L  +M+Q+G  P+++T+  +VN LCK GD 
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 203

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           + A +++ +M   +   +   +N  I   C+   +D AL+LF  M   GIRPN VT++ L
Sbjct: 204 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 263

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LC  G   DA + L +++   + K   +++T   L+D++ K G   +A  L++DM +
Sbjct: 264 ISCLCSYGRWSDASQLLSDMI---EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 320

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           ++I  DI  YN L+NGFC++  +  A   F  M+ +   PDV+TYNTL+   CK  ++++
Sbjct: 321 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 380

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
            +  +  +S  G+  D ++Y T+IQGL   GD   A++    M+   V P+   +++++D
Sbjct: 381 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 440

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G    G L  A  + D M    +  +++ +  +I    + G + D + L   + L G+ P
Sbjct: 441 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 500

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +V TYN +I   C+   +  A  L  +M   G  P+  TY  LI+ H   G+   + E+ 
Sbjct: 501 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 560

Query: 530 AKIQT 534
            ++++
Sbjct: 561 REMRS 565



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 224/446 (50%), Gaps = 16/446 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C   +I  AL L  KM++ G  P ++T + L+N  C    +  A  ++ +M EM 
Sbjct: 88  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T+   I G    N+  +A+ L   M   G +PN VT+ ++V+ LCK+G    A+
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++ A    K  +DV+    ++DS  K      AL L+ +M  K I+ ++V Y+ LI
Sbjct: 208 NLLNKMEA---AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 264

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G  S A      M+++   P+++T+N L++   K+GK  EA   Y  + K  + 
Sbjct: 265 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 324

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y +++ G C+H  + KA++    M+ K   P+   +N +I G+ +   + +   +
Sbjct: 325 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 384

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+  +  T+  LI      G   +A  + K+M+ DG+ PD+ TY++L+   CN
Sbjct: 385 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 444

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  AL+++D M +  I  DI  YT +I+G C  G + +  ++F  +   G+  + + 
Sbjct: 445 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 504

Query: 544 F----------RILKKRY---RRMKE 556
           +          R+L++ Y   ++MKE
Sbjct: 505 YNTMISGLCSKRLLQEAYALLKKMKE 530



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 213/431 (49%), Gaps = 6/431 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           DYR    ++R+     K+  A+ L   M++   +P ++  N L++ + K+   +    + 
Sbjct: 14  DYRE---ILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLG 70

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M  +       TYN  I  +CR +++  AL L   M   G  P+ VT + L++  C  
Sbjct: 71  EKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 130

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             + DAV  + +++   +     D IT T L+   F +    +A+AL + M Q+  Q ++
Sbjct: 131 KRISDAVALVDQMV---EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 187

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y V++NG C  GD   A     +M       DV+ +NT+++ LCK   +D+A + +  
Sbjct: 188 VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 247

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G+ P+ ++Y ++I  LC +G    A + L  M+EK + P    +N +ID + + G 
Sbjct: 248 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 307

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
              A  + D M+   +  ++FT+N+L+        +  A  + + M+    FPDV TYN 
Sbjct: 308 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 367

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C    +    +L+ EM  RG+  D +TYT LI+G    G+   A++VF ++ + G
Sbjct: 368 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 427

Query: 537 LAIDHIPFRIL 547
           +  D + + IL
Sbjct: 428 VPPDIMTYSIL 438



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 139/315 (44%), Gaps = 44/315 (13%)

Query: 82  NPQAV-FNAL-DLILKEN--LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTA 137
           NP  V FNAL D  +KE   ++  K   D   ++ +++ D   + +++   C+  ++  A
Sbjct: 289 NPNLVTFNALIDAFVKEGKFVEAEKLYDDM--IKRSIDPDIFTYNSLVNGFCMHDRLDKA 346

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
             +   M+ K   PDV+T+N L+   CK   +E    + REMS      +  TY   I G
Sbjct: 347 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 406

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
                + D A  +F  M ++G+ P+ +T++IL+  LC                       
Sbjct: 407 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC----------------------- 443

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
                           NG   +AL +++ M +  I+ DI  Y  +I G C  G +   + 
Sbjct: 444 ---------------NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 488

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            FC +  +G  P+V+TYNT+++ LC +  L EA      + + G  P+  +Y T+I+   
Sbjct: 489 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 548

Query: 378 IHGDIVKAREFLLSM 392
             GD   + E +  M
Sbjct: 549 RDGDKAASAELIREM 563



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 39/237 (16%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I+ L   G    A  + ++M+  G  PD++T++ L++ LC  G LEKA 
Sbjct: 393 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 452

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V   M +     +   Y   I G C+  ++D    LF +++  G++PN VT+N ++  L
Sbjct: 453 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 512

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C K LL                                       +A AL   M +    
Sbjct: 513 CSKRLLQ--------------------------------------EAYALLKKMKEDGPL 534

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            +   YN LI     +GD +++     +M    F+ D  T   + N L   G+LD++
Sbjct: 535 PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 590


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 220/417 (52%), Gaps = 3/417 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  L L  K   A+ L  +M+Q+G  PD++T+  +VN LCK GD++ A  ++++M + +
Sbjct: 191 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGK 250

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +   YN  I G C+   +D A  LF+ M   GIRP+  T+N L+  LC  G   DA 
Sbjct: 251 IEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDAS 310

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L  ++   + K   +V+T + L+D++ K G   +A  L+++M +++I  DI  Y+ LI
Sbjct: 311 RLLSNMI---ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NGFC++  +  A   F  M+ +   P+V+TYNTL+   CK  +++E    +  +S+ G+ 
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            + ++Y T+IQGL   GD   A++    M+   V P+   +++++DG  + G L  A  +
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + +    +  +++T+N +I    + G + D + L   + L G+ P+V  Y  +I   C 
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            G    A  L+ EM   G  PD   Y  LI+     G+   + E+  ++++ G   D
Sbjct: 548 KGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 604



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 213/421 (50%), Gaps = 3/421 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C   ++  AL +  KM++ G  PD++T + L+N  C    +  A  ++ +M EM 
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T+N  I G    N+  +A+ L   M   G +P+ VT+  +V+ LCK+G +  A+
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++   + GK  +DV+    ++D   K      A AL+N M  K I+ D+  YN LI
Sbjct: 241 SLLKKM---EKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G  S A      M++R   P+V+T++ L++   K+GKL EA   Y  + K  + 
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y ++I G C+H  + +A+     M+ K   P    +N +I G+ +   +     +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+  N  T+N LI    + G    A  + K+M+ DG+ PD+ TY++L+   C 
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  AL +++ + +  + PDI TY  +I+G C  G +++  ++F  +   G+  + I 
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537

Query: 544 F 544
           +
Sbjct: 538 Y 538



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 219/431 (50%), Gaps = 5/431 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           DYR  ++  R+  L  K+  A+ L  +M+Q   +P ++  N L++ + K+   +    + 
Sbjct: 46  DYREKLS--RNALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLG 103

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M  +R S +  +YN  I  +CR ++L  AL +   M   G  P+ VT + L++  C  
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHS 163

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             + DAV  + +++   +     D +T   L+   F +    +A+AL + M Q+  Q D+
Sbjct: 164 KRISDAVALVDQMV---EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 220

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  ++NG C  GDI  A +   +M K     DV+ YNT+++ LCK   +D+A   +  
Sbjct: 221 VTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNK 280

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G+ PD  +Y ++I  LC +G    A   L +M+E+ + P    ++ +ID + + G 
Sbjct: 281 METKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGK 340

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L  A  + D M+   +  ++FT+++LI        + +A  + + M+    FP+V TYN 
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C    +   ++L+ EM +RG+  + +TY  LI+G    G+   A+++F K+ + G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460

Query: 537 LAIDHIPFRIL 547
           +  D I + IL
Sbjct: 461 VPPDIITYSIL 471



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 202/396 (51%), Gaps = 3/396 (0%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D+ ++N L+N  C+   L  A  V+ +M ++   P+  T ++ + GYC    +  A+ L 
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 173

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M   G +P+ VT N L+H L       +AV  + +++         D++T   +++  
Sbjct: 174 DQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRG---CQPDLVTYGAVVNGL 230

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K GD   AL+L   M +  I+ D+V YN +I+G C    I  AFA F +M  +G  PDV
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDV 290

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            TYN+L++CLC  G+  +AS     + +  + P+ +++  +I      G +V+A +    
Sbjct: 291 FTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M+++S+ P+   ++ +I+G+     L  A  + +LM+S     NV T+N LI    +   
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + +   L +EM   G+  +  TYN LI      G   +A +++ +M+  G+ PDIITY+ 
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           L+ G C  G +++A  VF  +Q   +  D   + I+
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 209/418 (50%), Gaps = 14/418 (3%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           L+ N L+N       L+ A  +  EM + RP P+   +N  ++   ++ + D  + L   
Sbjct: 51  LSRNALLNL-----KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGER 105

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M N  I  +  ++NIL++  C++  L  A+  LG+++         D++T + L++ Y  
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLG---YEPDIVTLSSLLNGYCH 162

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           +     A+AL + M +   + D V +N LI+G  L+   S A A   QM++RG  PD++T
Sbjct: 163 SKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 222

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y  ++N LCK+G +D A      + K  +  D + Y TII GLC +  I  A      M 
Sbjct: 223 YGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKME 282

Query: 394 EKSVVPEPHIWNVIID---GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            K + P+   +N +I     YGR  D S   S    M+   ++ NV TF+ALI A  + G
Sbjct: 283 TKGIRPDVFTYNSLISCLCNYGRWSDASRLLSN---MIERKINPNVVTFSALIDAFVKEG 339

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A  L  EM+   I PD+FTY+ LI   C    +  A  +++ M+ +   P+++TY 
Sbjct: 340 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            LIKG C    ++E  E+F ++   GL  + + +  L +   +  + D A+ I +K +
Sbjct: 400 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 193/373 (51%), Gaps = 7/373 (1%)

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +LD A+ LF  M  +   P+ V  N L+ A+ K     D V  LGE +   + + + D+ 
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKF-DLVISLGERM--QNLRISYDLY 116

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           +  IL++ + +      ALA+   M +   + DIV  + L+NG+C +  IS A A   QM
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 176

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           ++ G+ PD +T+NTL++ L    K  EA      + + G  PD ++Y  ++ GLC  GDI
Sbjct: 177 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDI 236

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A   L  M +  +  +  I+N IIDG  +   + +AF++ + M + G+  +VFT+N+L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSL 296

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I      G   DA  L   M+   I P+V T++ LI A    G +  A +LYDEM++R I
Sbjct: 297 ISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA-- 560
            PDI TY+ LI G C    + EA+ +F  + +     + + +  L K + + K  ++   
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416

Query: 561 --RDIHQKWLLRN 571
             R++ Q+ L+ N
Sbjct: 417 LFREMSQRGLVGN 429



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 183/385 (47%), Gaps = 7/385 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  +I  LC    I  A  L  KM  KG  PDV T+N L++ LC  G    A 
Sbjct: 251 IEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDAS 310

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++  M E + +PN  T++A I  + +  +L +A  L+  M    I P+  T++ L++  
Sbjct: 311 RLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C    L D  K + E++   D     +V+T   L+  + K     + + L+ +M Q+ + 
Sbjct: 371 CMHDRL-DEAKHMFELMISKD--CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            + V YN LI G    GD   A   F +M+  G  PD+ITY+ LL+ LCK GKL++A   
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  L K+ + PD  +Y  +I+G+C  G +    +   S+  K V P   I+  +I G+ R
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G    A ++   M   G   +   +N LI A  R G    +  L KEM   G   D  T
Sbjct: 548 KGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 607

Query: 474 YNLLIGASCNLGHIHLALQLYDEML 498
            +++I    N+ H     + Y EML
Sbjct: 608 ISMVI----NMLHDGRLEKSYLEML 628



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 151/331 (45%), Gaps = 42/331 (12%)

Query: 82  NPQAV-FNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
           NP  V F+AL D  +KE  L   + + D   ++ +++ D   + ++I   C+  ++  A 
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            +   MI K   P+V+T+N L+   CK   +E+   + REMS+     N  TYN  I G 
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            +  + D A  +F  M ++G+ P+ +T++IL+  LCK G L                   
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE------------------ 482

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
                               +AL ++  + +  ++ DI  YN++I G C  G +   +  
Sbjct: 483 --------------------KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           FC +  +G  P+VI Y T+++  C++G  +EA   +  + + G  PD   Y T+I+    
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLR 582

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
            GD   + E +  M     V +    +++I+
Sbjct: 583 DGDKAASAELIKEMRSCGFVGDASTISMVIN 613


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 231/464 (49%), Gaps = 15/464 (3%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D      ++  LC  G++  A+ L  +M++ G  PD +T+   V+ +CK+GD   A +++
Sbjct: 181 DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLL 240

Query: 177 REMSEMRP-SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           R+M E+    PN   Y+A I G C+      + +LF  M + GI PN VT+N ++   C 
Sbjct: 241 RKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCI 300

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G    A + L E+L   + K + +V+T   L++++ K G  F+A  L+++M  + I  +
Sbjct: 301 SGRWSAAQRLLQEML---ERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
            + YN +I+GFC    + +A   F  M  +G  PDV T+ TL++  C   ++D+      
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + + G+  + ++Y T+I G C+ GD+  A +    M+   V P+    N ++DG    G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 416 DLSNAFSIRDLMLSF-----------GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
            L +A  +   M              GV  +V T+N LI      G   +A  L +EM  
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 537

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            GI PD  TY+ +I   C    +  A Q++  M  +  +P+++T+  LI G+C  G + +
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 597

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             E+F ++   G+  D I +  L   +R++   + A DI Q+ +
Sbjct: 598 GLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI 641



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/424 (31%), Positives = 213/424 (50%), Gaps = 14/424 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  LC  G+   +  L  +M  KG  P+++T+N ++   C  G    A  +++EM 
Sbjct: 256 YSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEML 315

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E + SPN  TYNA I  + +  +  +A  L+  M   GI PN +T+N ++   CK+  L 
Sbjct: 316 ERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL- 374

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA + +  ++A      + DV T T L+D Y         + L ++M ++ +  + V YN
Sbjct: 375 DAAEDMFYLMATK--GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYN 432

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+GFCL GD+++A     QM+  G  PD++T NTLL+ LC  GKL +A   +  + K+
Sbjct: 433 TLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492

Query: 361 -----------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
                      GV PD ++Y  +I GL   G  ++A E    M  + +VP+   ++ +ID
Sbjct: 493 KMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  +   L  A  +   M S   S NV TFN LI    + G + D   L  EM   GI  
Sbjct: 553 GLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVA 612

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D   Y  LI     +G+I+ AL ++ EM+  G+ PD IT   ++ G  ++  ++ A  + 
Sbjct: 613 DAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAML 672

Query: 530 AKIQ 533
             +Q
Sbjct: 673 EDLQ 676



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 221/487 (45%), Gaps = 22/487 (4%)

Query: 64  CRSKTRHWFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVA 123
           C    RH  + K  D E   +A F    L L+     +K + D       L +D  R   
Sbjct: 23  CTGSIRHALAEKSRDGESG-EAGFRGESLKLRSGSYEIKGLEDA----IDLFSDMLRSRP 77

Query: 124 VIRDLCLGGKIGTALWLRR---------KMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           +   +     +G  + + R         KM +K    D+ +   L+   C    L  A  
Sbjct: 78  LPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALS 137

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
              +++++   P+  T+   + G C  + + +AL LF  +     RP+ +T   L++ LC
Sbjct: 138 TFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC----RPDVLTFTTLMNGLC 193

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ-KNIQ 293
           ++G + +AV  L  ++   +     D IT    +D   K GD   AL L   M +  +I+
Sbjct: 194 REGRVVEAVALLDRMV---ENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIK 250

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++V Y+ +I+G C +G  S +   F +M  +G  P+++TYN ++   C  G+   A   
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + +  ++P+ ++Y  +I      G   +A E    ML + ++P    +N +IDG+ +
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              L  A  +  LM + G S +VFTF  LI        I D   L  EM   G+  +  T
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN LI   C +G ++ AL L  +M+  G+ PDI+T   L+ G C  G +K+A E+F  +Q
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 534 TLGLAID 540
              + +D
Sbjct: 491 KSKMDLD 497



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 189/414 (45%), Gaps = 26/414 (6%)

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           +I  LE A  +  +M   RP P+   +N  +    R+   D  + L+  M    IR +  
Sbjct: 58  EIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIY 117

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           +  IL+   C    L  A+   G++          DV+T T L+     +    +AL   
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTK---LGLHPDVVTFTTLLHGLCLDHRVSEAL--- 171

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
            D+F +  + D++ +  L+NG C  G +  A A   +M++ G  PD ITY T ++ +CK 
Sbjct: 172 -DLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKM 230

Query: 345 G----------KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           G          K++E SH         + P+ + Y  II GLC  G    +    + M +
Sbjct: 231 GDTVSALNLLRKMEEISH---------IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQD 281

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K + P    +N +I G+   G  S A  +   ML   +S NV T+NALI A  + G  F+
Sbjct: 282 KGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFE 341

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L  EML  GI P+  TYN +I   C    +  A  ++  M  +G +PD+ T+T LI 
Sbjct: 342 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 401

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+C    + +  E+  ++   GL  + + +  L   +  + + + A D+ Q+ +
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 148/332 (44%), Gaps = 41/332 (12%)

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L DA+    ++L     +    VI    LM +  +       ++L+  M +K I+ DI +
Sbjct: 62  LEDAIDLFSDMLR---SRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYS 118

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           + +LI  FC    +  A + F ++ K G  PDV+T+ TLL+ LC   ++ EA   +  + 
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC 178

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           +    PD +++ T++ GLC  G +V+A   L  M+E  + P+   +   +DG  + GD  
Sbjct: 179 R----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           +A ++                                  L+K   +  I P+V  Y+ +I
Sbjct: 235 SALNL----------------------------------LRKMEEISHIKPNVVIYSAII 260

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G    +  L+ EM  +GI P+I+TY  +I G C  G    A+ +  ++    ++
Sbjct: 261 DGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKIS 320

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            + + +  L   + +  +  +A +++ + L R
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPR 352



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 9/208 (4%)

Query: 94  LKENLDRLKTMR------DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           LK+ L+  K M+      D       +E D   +  +I  L   GK   A  L  +M  +
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 538

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VPD +T++ +++ LCK   L++A  +   M     SPN  T+N  I GYC+   +D  
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           L LF  M   GI  + + +  L++   K G +  A+    E+++        D IT   +
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS---SGVYPDTITIRNM 655

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTD 295
           +  ++   +  +A+A+  D+ +  ++ +
Sbjct: 656 LTGFWSKEELERAVAMLEDLQRYQLEDE 683


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 222/425 (52%), Gaps = 7/425 (1%)

Query: 114 LETDYR----RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +E  YR        +I  L L  K   A+ L  +M+Q+G  P+++T+  +VN LCK GD 
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           + A +++ +M   +   +   +N  I   C+   +D AL+LF  M   GIRPN VT++ L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LC  G   DA + L +++   + K   +++T   L+D++ K G   +A  L++DM +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMI---EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           ++I  DI  YN L+NGFC++  +  A   F  M+ +   PDV+TYNTL+   CK  ++++
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
            +  +  +S  G+  D ++Y T+IQGL   GD   A++    M+   V P+   +++++D
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G    G L  A  + D M    +  +++ +  +I    + G + D + L   + L G+ P
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +V TYN +I   C+   +  A  L  +M   G  P+  TY  LI+ H   G+   + E+ 
Sbjct: 539 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598

Query: 530 AKIQT 534
            ++++
Sbjct: 599 REMRS 603



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 224/446 (50%), Gaps = 16/446 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C   +I  AL L  KM++ G  P ++T + L+N  C    +  A  ++ +M EM 
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T+   I G    N+  +A+ L   M   G +PN VT+ ++V+ LCK+G    A+
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++ A    K  +DV+    ++DS  K      AL L+ +M  K I+ ++V Y+ LI
Sbjct: 246 NLLNKMEA---AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G  S A      M+++   P+++T+N L++   K+GK  EA   Y  + K  + 
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y +++ G C+H  + KA++    M+ K   P+   +N +I G+ +   + +   +
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+  +  T+  LI      G   +A  + K+M+ DG+ PD+ TY++L+   CN
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  AL+++D M +  I  DI  YT +I+G C  G + +  ++F  +   G+  + + 
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 542

Query: 544 F----------RILKKRY---RRMKE 556
           +          R+L++ Y   ++MKE
Sbjct: 543 YNTMISGLCSKRLLQEAYALLKKMKE 568



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 229/474 (48%), Gaps = 15/474 (3%)

Query: 74  NKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGK 133
           +++   +GNP+   +++DL           M   G    +   DYR    ++R+     K
Sbjct: 18  HRNLQGKGNPRIAPSSIDLC---------GMCYWGRAFSSGSGDYRE---ILRNGLHDMK 65

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           +  A+ L   M++   +P ++  N L++ + K+   +    +  +M  +       TYN 
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            I  +CR +++  AL L   M   G  P+ VT + L++  C    + DAV  + +++   
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV--- 182

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
           +     D IT T L+   F +    +A+AL + M Q+  Q ++V Y V++NG C  GD  
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A     +M       DV+ +NT+++ LCK   +D+A + +  +   G+ P+ ++Y ++I
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
             LC +G    A + L  M+EK + P    +N +ID + + G    A  + D M+   + 
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            ++FT+N+L+        +  A  + + M+    FPDV TYN LI   C    +    +L
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + EM  RG+  D +TYT LI+G    G+   A++VF ++ + G+  D + + IL
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 139/315 (44%), Gaps = 44/315 (13%)

Query: 82  NPQAV-FNAL-DLILKEN--LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTA 137
           NP  V FNAL D  +KE   ++  K   D   ++ +++ D   + +++   C+  ++  A
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDM--IKRSIDPDIFTYNSLVNGFCMHDRLDKA 384

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
             +   M+ K   PDV+T+N L+   CK   +E    + REMS      +  TY   I G
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
                + D A  +F  M ++G+ P+ +T++IL+  LC                       
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC----------------------- 481

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
                           NG   +AL +++ M +  I+ DI  Y  +I G C  G +   + 
Sbjct: 482 ---------------NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            FC +  +G  P+V+TYNT+++ LC +  L EA      + + G  P+  +Y T+I+   
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 586

Query: 378 IHGDIVKAREFLLSM 392
             GD   + E +  M
Sbjct: 587 RDGDKAASAELIREM 601



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 39/237 (16%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I+ L   G    A  + ++M+  G  PD++T++ L++ LC  G LEKA 
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V   M +     +   Y   I G C+  ++D    LF +++  G++PN VT+N ++  L
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C K LL                                       +A AL   M +    
Sbjct: 551 CSKRLLQ--------------------------------------EAYALLKKMKEDGPL 572

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            +   YN LI     +GD +++     +M    F+ D  T   + N L   G+LD++
Sbjct: 573 PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 628


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 224/464 (48%), Gaps = 36/464 (7%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G +  A   + KM++ G    ++T++ L+N L K+    +A+ V++E  E  
Sbjct: 287 LIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKG 346

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN   YN  I GYC++  L  AL +   M + GI PN VT N ++   CK G +  A 
Sbjct: 347 FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAE 406

Query: 244 KFLGEVLAD----DDGKATSDVITSTILMDSYF--------------------------- 272
             L E+L+     + G  T+  I   + M+S F                           
Sbjct: 407 CILEEMLSRGFSINPGAFTT--IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVG 464

Query: 273 ---KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K G    A+ LW  + +K    ++V  N LI+G C  G++  A     +ML+RGF+ 
Sbjct: 465 GLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL 524

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           D ITYNTL++  CK+GK++E     G + K G+ PD  +Y  +I G+C  G + +A    
Sbjct: 525 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 584

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
                + +VP  + + V+IDGY +   +     +   +L+  +  N   +N LI A  R 
Sbjct: 585 NECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRN 644

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G+  +AF L  +M   GI P   TY+ LI   CN+G +  A  L DEM + G+ P+++ Y
Sbjct: 645 GNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCY 704

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           T LI G+C  G M +   V  ++ +  +  + I + ++   Y +
Sbjct: 705 TALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSK 748



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 224/465 (48%), Gaps = 15/465 (3%)

Query: 87  FNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQ 146
           FN  + +LKE L++  T  +   V  TL   Y          C  G +G AL +R  M+ 
Sbjct: 332 FNEANSVLKETLEKGFTPNEV--VYNTLIDGY----------CKMGNLGDALRIRGDMVS 379

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           KG  P+ +T N ++   CKIG +E+A+ ++ EM     S N   +   I   C  +  + 
Sbjct: 380 KGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFES 439

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           AL     M    +RPN      LV  LCK+G   DAV+    +L    G   ++++T+  
Sbjct: 440 ALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFG---ANLVTTNA 496

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+    K G+  +A+ L   M ++    D + YN LI+G C  G +   F    +M+K+G
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PD  TYN L++ +C+ GKLDEA + +       + P+  +Y  +I G C    I +  
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 616

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           +    +L +++     ++N +I  Y R G+   AF + D M S G+     T+++LI   
Sbjct: 617 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 676

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + DA  L  EM  +G+ P+V  Y  LIG  C LG +   + +  EM    I P+ 
Sbjct: 677 CNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNK 736

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           ITYT +I G+   G+MK A ++  ++   G+  D + + +L   +
Sbjct: 737 ITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGF 781



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 215/441 (48%), Gaps = 4/441 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  L    ++  + W+   M Q G  PDV   +  +N  CK G +E A  +  +M ++ 
Sbjct: 218 LLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLG 276

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SPN  TYN  I G C+   LD+A      M  +G+    +T+++L++ L K     +A 
Sbjct: 277 VSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEAN 336

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E L  + G   ++V+ +T L+D Y K G+   AL +  DM  K I  + V  N +I
Sbjct: 337 SVLKETL--EKGFTPNEVVYNT-LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSII 393

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            GFC  G +  A     +ML RGF  +   + T+++ LC   + + A  F   +    + 
Sbjct: 394 QGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMR 453

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+     T++ GLC  G    A E    +LEK         N +I G  + G++  A  +
Sbjct: 454 PNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRL 513

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              ML  G   +  T+N LI    + G + + F L+ EM+  GI PD FTYNLLI   C 
Sbjct: 514 LKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCR 573

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           +G +  A+ L++E   R + P++ TY  +I G+C    ++E E++F ++ T  L ++ + 
Sbjct: 574 IGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVV 633

Query: 544 FRILKKRYRRMKESDKARDIH 564
           +  L + Y R   + +A  +H
Sbjct: 634 YNTLIRAYCRNGNTVEAFKLH 654



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 184/393 (46%), Gaps = 3/393 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC+  +  +AL   R+M+ +   P+      LV  LCK G    A  +   + E 
Sbjct: 426 TIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK 485

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N  T NA I G C+   + +A+ L   M   G   +++T+N L+   CK+G + + 
Sbjct: 486 GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEG 545

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K  GE++         D  T  +L+    + G   +A+ LWN+   +++  ++  Y V+
Sbjct: 546 FKLRGEMVKQG---IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVM 602

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G+C    I      F ++L +    + + YNTL+   C+ G   EA   +  +   G+
Sbjct: 603 IDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGI 662

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P   +Y ++I G+C  G +  A+  +  M ++ ++P    +  +I GY + G +    +
Sbjct: 663 PPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVN 722

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M S+ +  N  T+  +I   ++ G +  A  L  EM+  GI PD  TYN+L    C
Sbjct: 723 VLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC 782

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             G I    ++ D M + G+  D ITYT L+ G
Sbjct: 783 KEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 147/317 (46%), Gaps = 43/317 (13%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E +  LK M + G V      D   +  +I   C  GK+     LR +M+++G  PD 
Sbjct: 507 MQEAVRLLKKMLERGFV-----LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDT 561

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+N L++ +C+IG L++A ++  E       PN  TY   I GYC+ +++++   LF+ 
Sbjct: 562 FTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTE 621

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           +    +  N V +N L+ A C+ G   +A K   ++ +      T+   T + L+     
Sbjct: 622 LLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA---TYSSLIHGMCN 678

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC-------------------------- 307
            G    A  L ++M ++ +  ++V Y  LI G+C                          
Sbjct: 679 IGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKIT 738

Query: 308 ---------LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
                     +GD+ +A     +M+ +G +PD +TYN L N  CK+GK++E       +S
Sbjct: 739 YTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMS 798

Query: 359 KTGVAPDQISYKTIIQG 375
           + G+  D+I+Y T++ G
Sbjct: 799 QEGLPLDEITYTTLVHG 815


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 231/464 (49%), Gaps = 15/464 (3%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D      ++  LC  G++  A+ L  +M++ G  PD +T+   V+ +CK+GD   A +++
Sbjct: 181 DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLL 240

Query: 177 REMSEMRP-SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           R+M E+    PN   Y+A I G C+      + +LF  M + GI PN VT+N ++   C 
Sbjct: 241 RKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCI 300

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G    A + L E+L   + K + +V+T   L++++ K G  F+A  L+++M  + I  +
Sbjct: 301 SGRWSAAQRLLQEML---ERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
            + YN +I+GFC    + +A   F  M  +G  PDV T+ TL++  C   ++D+      
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + + G+  + ++Y T+I G C+ GD+  A +    M+   V P+    N ++DG    G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 416 DLSNAFSIRDLMLSF-----------GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
            L +A  +   M              GV  +V T+N LI      G   +A  L +EM  
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 537

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            GI PD  TY+ +I   C    +  A Q++  M  +  +P+++T+  LI G+C  G + +
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 597

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             E+F ++   G+  D I +  L   +R++   + A DI Q+ +
Sbjct: 598 GLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI 641



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 218/432 (50%), Gaps = 17/432 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  LC  G+   +  L  +M  KG  P+++T+N ++   C  G    A  +++EM 
Sbjct: 256 YSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEML 315

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E + SPN  TYNA I  + +  +  +A  L+  M   GI PN +T+N ++   CK+  L 
Sbjct: 316 ERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL- 374

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA + +  ++A      + DV T T L+D Y         + L ++M ++ +  + V YN
Sbjct: 375 DAAEDMFYLMATK--GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYN 432

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+GFCL GD+++A     QM+  G  PD++T NTLL+ LC  GKL +A   +  + K+
Sbjct: 433 TLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492

Query: 361 -----------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
                      GV PD ++Y  +I GL   G  ++A E    M  + +VP+   ++ +ID
Sbjct: 493 KMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  +   L  A  +   M S   S NV TFN LI    + G + D   L  EM   GI  
Sbjct: 553 GLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVA 612

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D   Y  LI     +G+I+ AL ++ EM+  G+ PD IT   ++ G  ++   +E E   
Sbjct: 613 DAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK---EELERAV 669

Query: 530 AKIQTLGLAIDH 541
           A ++ L +++ +
Sbjct: 670 AMLEDLQMSVGY 681



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 221/487 (45%), Gaps = 22/487 (4%)

Query: 64  CRSKTRHWFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVA 123
           C    RH  + K  D E   +A F    L L+     +K + D       L +D  R   
Sbjct: 23  CTGSIRHALAEKSRDGESG-EAGFRGESLKLRSGSYEIKGLEDA----IDLFSDMLRSRP 77

Query: 124 VIRDLCLGGKIGTALWLRR---------KMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           +   +     +G  + + R         KM +K    D+ +   L+   C    L  A  
Sbjct: 78  LPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALS 137

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
              +++++   P+  T+   + G C  + + +AL LF  +     RP+ +T   L++ LC
Sbjct: 138 TFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC----RPDVLTFTTLMNGLC 193

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ-KNIQ 293
           ++G + +AV  L  ++   +     D IT    +D   K GD   AL L   M +  +I+
Sbjct: 194 REGRVVEAVALLDRMV---ENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIK 250

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++V Y+ +I+G C +G  S +   F +M  +G  P+++TYN ++   C  G+   A   
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + +  ++P+ ++Y  +I      G   +A E    ML + ++P    +N +IDG+ +
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              L  A  +  LM + G S +VFTF  LI        I D   L  EM   G+  +  T
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN LI   C +G ++ AL L  +M+  G+ PDI+T   L+ G C  G +K+A E+F  +Q
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 534 TLGLAID 540
              + +D
Sbjct: 491 KSKMDLD 497



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 189/414 (45%), Gaps = 26/414 (6%)

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           +I  LE A  +  +M   RP P+   +N  +    R+   D  + L+  M    IR +  
Sbjct: 58  EIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIY 117

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           +  IL+   C    L  A+   G++          DV+T T L+     +    +AL   
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKL---GLHPDVVTFTTLLHGLCLDHRVSEAL--- 171

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
            D+F +  + D++ +  L+NG C  G +  A A   +M++ G  PD ITY T ++ +CK 
Sbjct: 172 -DLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKM 230

Query: 345 G----------KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           G          K++E SH         + P+ + Y  II GLC  G    +    + M +
Sbjct: 231 GDTVSALNLLRKMEEISH---------IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQD 281

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K + P    +N +I G+   G  S A  +   ML   +S NV T+NALI A  + G  F+
Sbjct: 282 KGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFE 341

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L  EML  GI P+  TYN +I   C    +  A  ++  M  +G +PD+ T+T LI 
Sbjct: 342 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 401

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+C    + +  E+  ++   GL  + + +  L   +  + + + A D+ Q+ +
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 148/333 (44%), Gaps = 41/333 (12%)

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L DA+    ++L     +    VI    LM +  +       ++L+  M +K I+ DI +
Sbjct: 62  LEDAIDLFSDMLRS---RPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYS 118

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           + +LI  FC    +  A + F ++ K G  PDV+T+ TLL+ LC   ++ EA   +  + 
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC 178

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           +    PD +++ T++ GLC  G +V+A   L  M+E  + P+   +   +DG  + GD  
Sbjct: 179 R----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           +A ++                                  L+K   +  I P+V  Y+ +I
Sbjct: 235 SALNL----------------------------------LRKMEEISHIKPNVVIYSAII 260

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G    +  L+ EM  +GI P+I+TY  +I G C  G    A+ +  ++    ++
Sbjct: 261 DGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKIS 320

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            + + +  L   + +  +  +A +++ + L R 
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRG 353



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 9/200 (4%)

Query: 94  LKENLDRLKTMR------DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           LK+ L+  K M+      D       +E D   +  +I  L   GK   A  L  +M  +
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 538

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VPD +T++ +++ LCK   L++A  +   M     SPN  T+N  I GYC+   +D  
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           L LF  M   GI  + + +  L++   K G +  A+    E+++        D IT   +
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS---SGVYPDTITIRNM 655

Query: 268 MDSYFKNGDKFQALALWNDM 287
           +  ++   +  +A+A+  D+
Sbjct: 656 LTGFWSKEELERAVAMLEDL 675


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 226/464 (48%), Gaps = 36/464 (7%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G +  A   + KM++ G    ++T++ L+N L K+    +A+ V++E  E  
Sbjct: 354 LIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKG 413

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN   YN  I GYC++  L  AL +   M + GI PN VT N ++   CK G +  A 
Sbjct: 414 FTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAE 473

Query: 244 KFLGEVLAD----DDGKATSDVITSTILMDSYFKNGDKF--------------------- 278
             L E+L+     + G  T+  I   + M+S F++  +F                     
Sbjct: 474 CILEEMLSRGFSINPGAFTT--IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVG 531

Query: 279 ---------QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
                     A+ LW  + +K    ++V  N LI+G C  G++  A     +ML+RGF+ 
Sbjct: 532 GLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL 591

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           D ITYNTL++  CK+GK++E     G + K G+ PD  +Y  +I G+C  G + +A    
Sbjct: 592 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 651

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
                + +VP  + + V+IDGY +   +     +   +L+  +  N   +N LI A  R 
Sbjct: 652 NECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRN 711

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G+  +AF L  +M   GI P   TY+ LI   CN+G +  A  L DEM + G+ P+++ Y
Sbjct: 712 GNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCY 771

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           T LI G+C  G M +   V  ++ +  +  + I + ++   Y +
Sbjct: 772 TALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSK 815



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 224/465 (48%), Gaps = 15/465 (3%)

Query: 87  FNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQ 146
           FN  + +LKE L++  T  +   V  TL   Y          C  G +G AL +R  M+ 
Sbjct: 399 FNEANSVLKETLEKGFTPNEV--VYNTLIDGY----------CKMGNLGDALRIRGDMVS 446

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           KG  P+ +T N ++   CKIG +E+A+ ++ EM     S N   +   I   C  +  + 
Sbjct: 447 KGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFES 506

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           AL     M    +RPN      LV  LCK+G   DAV+    +L    G   ++++T+  
Sbjct: 507 ALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFG---ANLVTTNA 563

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+    K G+  +A+ L   M ++    D + YN LI+G C  G +   F    +M+K+G
Sbjct: 564 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 623

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PD  TYN L++ +C+ GKLDEA + +       + P+  +Y  +I G C    I +  
Sbjct: 624 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 683

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           +    +L +++     ++N +I  Y R G+   AF + D M S G+     T+++LI   
Sbjct: 684 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 743

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + DA  L  EM  +G+ P+V  Y  LIG  C LG +   + +  EM    I P+ 
Sbjct: 744 CNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNK 803

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           ITYT +I G+   G+MK A ++  ++   G+  D + + +L   +
Sbjct: 804 ITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGF 848



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 215/441 (48%), Gaps = 4/441 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  L    ++  + W+   M Q G  PDV   +  +N  CK G +E A  +  +M ++ 
Sbjct: 285 LLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLG 343

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SPN  TYN  I G C+   LD+A      M  +G+    +T+++L++ L K     +A 
Sbjct: 344 VSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEAN 403

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E L  + G   ++V+ +T L+D Y K G+   AL +  DM  K I  + V  N +I
Sbjct: 404 SVLKETL--EKGFTPNEVVYNT-LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSII 460

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            GFC  G +  A     +ML RGF  +   + T+++ LC   + + A  F   +    + 
Sbjct: 461 QGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMR 520

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+     T++ GLC  G    A E    +LEK         N +I G  + G++  A  +
Sbjct: 521 PNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRL 580

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              ML  G   +  T+N LI    + G + + F L+ EM+  GI PD FTYNLLI   C 
Sbjct: 581 LKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCR 640

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           +G +  A+ L++E   R + P++ TY  +I G+C    ++E E++F ++ T  L ++ + 
Sbjct: 641 IGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVV 700

Query: 544 FRILKKRYRRMKESDKARDIH 564
           +  L + Y R   + +A  +H
Sbjct: 701 YNTLIRAYCRNGNTVEAFKLH 721



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 19/87 (21%), Positives = 44/87 (50%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I   C  G++   + + ++M      P+ +T+  +++   K GD++ A  ++ EM 
Sbjct: 771 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 830

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKA 207
                P+  TYN    G+C+  ++++ 
Sbjct: 831 GKGIVPDTVTYNVLTNGFCKEGKIEEG 857


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 216/436 (49%), Gaps = 4/436 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVP-DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           G +G A+ + R+M + G  P +  ++N ++  + + G    A  V  EM+E    PN  T
Sbjct: 178 GDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHIT 237

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I G+ +  +L+    L   M  +G++PN +T+N+L+  LC+ G +G+    L E+ 
Sbjct: 238 YNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 297

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
           +    K   D  T +IL D   +NGD    L+L+    +  +       ++L+NG C +G
Sbjct: 298 SQ---KMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 354

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +S A      ++  G +P  + YNTL+N  C+ G+L+ A   +G +    + PD I+Y 
Sbjct: 355 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 414

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +I GLC    I  A++ L+ M +  V P    +N +ID YGR G L   F +   M   
Sbjct: 415 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 474

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+  NV ++ +++ A  + G I +A ++  +M    + P+   YN +I A    G    A
Sbjct: 475 GLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQA 534

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
             L ++M   GI+P I+TY  LIKG C +  + EAEE+   +    L  D + +  L   
Sbjct: 535 FILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISA 594

Query: 551 YRRMKESDKARDIHQK 566
                  DKA D+ Q+
Sbjct: 595 CCYRGNIDKALDLQQR 610



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 216/440 (49%), Gaps = 3/440 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           GG +     LR +M+  G  P+ +T+N L++ LC+ G + +   ++ EM+  +  P+  T
Sbjct: 248 GGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFT 307

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y+    G  R  +    L LF     NG+     T +IL++ LCK G +  A + L  ++
Sbjct: 308 YSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLV 367

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             + G   + VI +T L++ Y + G+   A + +  M  ++I+ D + YN LING C   
Sbjct: 368 --NAGLVPTRVIYNT-LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 424

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            I++A     +M   G  P V T+NTL++   + G+L++       + + G+ P+ +SY 
Sbjct: 425 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG 484

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           +I+   C +G I +A   L  M  K V+P   ++N IID Y   G    AF + + M S 
Sbjct: 485 SIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 544

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+S ++ T+N LI        I +A  +   +    + PD  +YN LI A C  G+I  A
Sbjct: 545 GISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKA 604

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L L   M + GI   + TY +LI G    G + E E ++ K+    +   +    I+ + 
Sbjct: 605 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 664

Query: 551 YRRMKESDKARDIHQKWLLR 570
           Y +     KA D+ ++ L +
Sbjct: 665 YSKYGNEIKAEDLRKEMLQK 684



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 164/340 (48%), Gaps = 3/340 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  GK+  A  + + ++  G VP  + +N L+N  C+ G+LE A     +M    
Sbjct: 346 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 405

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYNA I G C+   +  A  L   M +NG+ P   T N L+ A  + G L    
Sbjct: 406 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 465

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E+    +     +V++   +++++ KNG   +A+A+ +DMF K++  +   YN +I
Sbjct: 466 IVLSEM---QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 522

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           + +  +G    AF    +M   G  P ++TYN L+  LC Q ++ EA      LS   + 
Sbjct: 523 DAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLI 582

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +SY T+I   C  G+I KA +    M +  +      ++ +I G G  G L+    +
Sbjct: 583 PDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYL 642

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
              M+   V  +    N ++ A ++ G+   A  L+KEML
Sbjct: 643 YQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 682



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 160/354 (45%), Gaps = 37/354 (10%)

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  +A+ G RP+    N  V A    G LG+AV  L  +    DG    +  +  +++  
Sbjct: 152 FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRM--GRDGAPPPNAFSYNVVIAG 209

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
            ++ G    A+ ++++M ++ +  + + YN +I+G    GD+ + F    QM+  G  P+
Sbjct: 210 MWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPN 269

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY--------------------- 369
            ITYN LL+ LC+ G++ E S     ++   + PD  +Y                     
Sbjct: 270 AITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFG 329

Query: 370 --------------KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
                           ++ GLC  G +  A E L S++   +VP   I+N +I+GY + G
Sbjct: 330 KYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG 389

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
           +L  AFS    M S  +  +  T+NALI    +   I +A  L  EM  +G+ P V T+N
Sbjct: 390 ELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFN 449

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            LI A    G +     +  EM   G+ P++++Y  ++   C  G + EA  + 
Sbjct: 450 TLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 503



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 135/315 (42%), Gaps = 38/315 (12%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D+  + A+I  LC   +I  A  L  +M   G  P V T N L++   + G LEK  
Sbjct: 406 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 465

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V+ EM E    PN  +Y + +  +C+  ++ +A+ +   M +  + PN   +N ++   
Sbjct: 466 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII--- 522

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
                                              D+Y ++G   QA  L   M    I 
Sbjct: 523 -----------------------------------DAYVEHGPNDQAFILVEKMKSNGIS 547

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             IV YN+LI G C    IS A      +     +PD ++YNTL++  C +G +D+A   
Sbjct: 548 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 607

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + K G+     +Y  +I GL   G + +       M++ +VVP   I N++++ Y +
Sbjct: 608 QQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 667

Query: 414 CGDLSNAFSIRDLML 428
            G+   A  +R  ML
Sbjct: 668 YGNEIKAEDLRKEML 682



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 3/217 (1%)

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           R  LP + + N LL  L   G+  +    +G+L+  G  PD  ++   +Q     GD+ +
Sbjct: 123 RAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGE 182

Query: 385 AREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
           A   L  M  +   P P+   +NV+I G  R G   +A  + D M    V  N  T+N +
Sbjct: 183 AVGMLRRM-GRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTM 241

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    +GG +   F L+ +M+  G+ P+  TYN+L+   C  G +     L DEM  + +
Sbjct: 242 IDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 301

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
            PD  TY+ L  G    G+ K    +F K    G+ I
Sbjct: 302 VPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 338



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 4/191 (2%)

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS-NVF 437
           H D+ +A   L S   +   P+   WN  +      GDL  A  +   M   G    N F
Sbjct: 145 HADVRRAFGILASAGAR---PDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAF 201

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           ++N +I    R G   DA  +  EM    + P+  TYN +I      G +    +L D+M
Sbjct: 202 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 261

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
           +  G+ P+ ITY  L+ G C  G M E   +  ++ +  +  D   + IL     R  +S
Sbjct: 262 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 321

Query: 558 DKARDIHQKWL 568
                +  K+L
Sbjct: 322 KAMLSLFGKYL 332



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 106/245 (43%), Gaps = 43/245 (17%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  M++ G     L+ +   + +++   C  GKI  A+ +   M  K  +P+   +N ++
Sbjct: 468 LSEMQENG-----LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 522

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           +   + G  ++A  ++ +M     SP+  TYN  I G C  +++ +A  + ++++N+ + 
Sbjct: 523 DAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLI 582

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P+ V++N L+ A C +G                                    N DK  A
Sbjct: 583 PDAVSYNTLISACCYRG------------------------------------NIDK--A 604

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           L L   M +  I++ +  Y+ LI+G    G ++     + +M++   +P    +N ++  
Sbjct: 605 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 664

Query: 341 LCKQG 345
             K G
Sbjct: 665 YSKYG 669


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/405 (35%), Positives = 209/405 (51%), Gaps = 3/405 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  LE     +  +IR  C  G++  A  L  +M+ +G VP ++T+N ++  LCK G +
Sbjct: 252 LRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRV 311

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A  ++  M      P+  +YN  I GY R+  + +A  LF+ +   G+ P+ VT+N L
Sbjct: 312 SDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTL 371

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LC+ G L  A++   E++         DV T TIL+  + K G+   A  L+++M  
Sbjct: 372 IDGLCRMGDLDVAMRLKDEMIKHG---PDPDVFTFTILVRGFCKLGNLPMAKELFDEMLN 428

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           + +Q D  AY   I G    GD S AF    +ML RGF PD+ITYN  ++ L K G L E
Sbjct: 429 RGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKE 488

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           AS     +   G+ PD ++Y +II    + G + KAR   L ML K + P    + V+I 
Sbjct: 489 ASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIH 548

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
            Y   G L  A      M   GV  NV T+NALI    +   +  A+    EM   GI P
Sbjct: 549 SYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISP 608

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           + +TY +LI  +CNLGH   AL+LY +ML R I PD  T++ L+K
Sbjct: 609 NKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLK 653



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 142/451 (31%), Positives = 227/451 (50%), Gaps = 38/451 (8%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V C +      +  ++   C  GK+  AL L  +M + G +P+ +T+N LVN L   G+L
Sbjct: 182 VECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGEL 241

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E+A  +I+EM  +    +  TY+  I GYC   +LD+A  L   M + G  P  VT+N +
Sbjct: 242 EQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTI 301

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           ++ LCK G + DA K L             DV                         M  
Sbjct: 302 MYGLCKWGRVSDARKLL-------------DV-------------------------MVN 323

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           KN+  D+V+YN LI G+   G+I  AF  F ++  RG +P V+TYNTL++ LC+ G LD 
Sbjct: 324 KNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDV 383

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A      + K G  PD  ++  +++G C  G++  A+E    ML + + P+   +   I 
Sbjct: 384 AMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIV 443

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  + GD S AF +++ ML+ G   ++ T+N  I    + G++ +A  L K+ML +G+ P
Sbjct: 444 GELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVP 503

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D  TY  +I A    GH+  A  ++ EML +GI P ++TYT LI  +  RG +K A   F
Sbjct: 504 DHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHF 563

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            ++   G+  + I +  L     ++++ D+A
Sbjct: 564 FEMHEKGVHPNVITYNALINGLCKVRKMDQA 594



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 115/345 (33%), Positives = 181/345 (52%), Gaps = 3/345 (0%)

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R + +D A  +++ M   GIRP  VT+N ++ + CK+G + +A++ L ++     G   +
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQM--QKMGCLPN 224

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DV T  +L++    +G+  QA  L  +M +  ++     Y+ LI G+C  G +  A    
Sbjct: 225 DV-TYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLG 283

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +ML RG +P ++TYNT++  LCK G++ +A     V+    + PD +SY T+I G    
Sbjct: 284 EEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRL 343

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G+I +A      +  + +VP    +N +IDG  R GDL  A  ++D M+  G   +VFTF
Sbjct: 344 GNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTF 403

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
             L+    + G++  A  L  EML  G+ PD F Y   I     LG    A  + +EML 
Sbjct: 404 TILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLA 463

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           RG  PD+ITY   I G    GN+KEA E+  K+   GL  DH+ +
Sbjct: 464 RGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 508



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 190/393 (48%), Gaps = 40/393 (10%)

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
             G + + +T+ +++  L + GL+  A   + +V++        DV+   +L+  Y K  
Sbjct: 74  QTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKS 133

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFC-LNGDISSAFAYFCQMLKRGFLPDVITY 334
              + L ++  M  K +  D+   N ++      +  I  A   +  M++ G  P V+TY
Sbjct: 134 MLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTY 193

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           NT+L+  CKQGK+ EA      + K G  P+ ++Y  ++ GL   G++ +A+E +  ML 
Sbjct: 194 NTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLR 253

Query: 395 -----------------------------------KSVVPEPHIWNVIIDGYGRCGDLSN 419
                                              +  VP    +N I+ G  + G +S+
Sbjct: 254 LGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSD 313

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  + D+M++  +  ++ ++N LI   TR G+I +AF L  E+   G+ P V TYN LI 
Sbjct: 314 ARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLID 373

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C +G + +A++L DEM++ G  PD+ T+T L++G C  GN+  A+E+F ++   GL  
Sbjct: 374 GLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQP 433

Query: 540 DHIPF--RILKKRYRRMKESDKARDIHQKWLLR 570
           D   +  RI+ +   ++ +  KA  + ++ L R
Sbjct: 434 DRFAYITRIVGE--LKLGDPSKAFGMQEEMLAR 464



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 129/289 (44%), Gaps = 38/289 (13%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM--- 179
            +I  LC  G +  A+ L+ +MI+ G  PDV T   LV   CK+G+L  A  +  EM   
Sbjct: 370 TLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNR 429

Query: 180 --------------SEMR---PS---------------PNCATYNAFITGYCRVNELDKA 207
                          E++   PS               P+  TYN FI G  ++  L +A
Sbjct: 430 GLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEA 489

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M  NG+ P+ VT+  ++HA    G L  A     E+L+         V+T T+L
Sbjct: 490 SELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKG---IFPSVVTYTVL 546

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           + SY   G    A+  + +M +K +  +++ YN LING C    +  A+ +F +M  +G 
Sbjct: 547 IHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGI 606

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            P+  TY  L+N  C  G   EA   Y  +    + PD  ++  +++ L
Sbjct: 607 SPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL 655



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 108/227 (47%), Gaps = 3/227 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G    A  ++ +M+ +G  PD++T+N  ++ L K+G+L++A  ++++M      P+  TY
Sbjct: 449 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 508

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
            + I  +     L KA  +F  M + GI P+ VT+ +L+H+   +G L  A+    E+  
Sbjct: 509 TSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEM-- 566

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     +VIT   L++   K     QA   + +M  K I  +   Y +LIN  C  G 
Sbjct: 567 -HEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGH 625

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
              A   +  ML R   PD  T++ LL  L K  K     H   V++
Sbjct: 626 WQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYKSHVVRHLENVIA 672



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 8/175 (4%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           LKE  + +K M   G     L  D+  + ++I    + G +  A  +  +M+ KG  P V
Sbjct: 486 LKEASELVKKMLYNG-----LVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSV 540

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+  L++     G L+ A     EM E    PN  TYNA I G C+V ++D+A   F+ 
Sbjct: 541 VTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTE 600

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           M   GI PN+ T+ IL++  C  G   +A++   ++L   D +   D  T + L+
Sbjct: 601 MQAKGISPNKYTYTILINENCNLGHWQEALRLYKDML---DREIQPDSCTHSALL 652



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 60/115 (52%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I    + G++  A+    +M +KG  P+V+T+N L+N LCK+  +++A     EM 
Sbjct: 543 YTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQ 602

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
               SPN  TY   I   C +    +AL L+  M +  I+P+  TH+ L+  L K
Sbjct: 603 AKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNK 657


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 216/436 (49%), Gaps = 4/436 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVP-DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           G +G A+ + R+M + G  P +  ++N ++  + + G    A  V  EM+E    PN  T
Sbjct: 41  GDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHIT 100

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I G+ +  +L+    L   M  +G++PN +T+N+L+  LC+ G +G+    L E+ 
Sbjct: 101 YNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 160

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
           +    K   D  T +IL D   +NGD    L+L+    +  +       ++L+NG C +G
Sbjct: 161 SQ---KMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 217

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +S A      ++  G +P  + YNTL+N  C+ G+L+ A   +G +    + PD I+Y 
Sbjct: 218 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 277

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +I GLC    I  A++ L+ M +  V P    +N +ID YGR G L   F +   M   
Sbjct: 278 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 337

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+  NV ++ +++ A  + G I +A ++  +M    + P+   YN +I A    G    A
Sbjct: 338 GLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQA 397

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
             L ++M   GI+P I+TY  LIKG C +  + EAEE+   +    L  D + +  L   
Sbjct: 398 FILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISA 457

Query: 551 YRRMKESDKARDIHQK 566
                  DKA D+ Q+
Sbjct: 458 CCYRGNIDKALDLQQR 473



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 216/440 (49%), Gaps = 3/440 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           GG +     LR +M+  G  P+ +T+N L++ LC+ G + +   ++ EM+  +  P+  T
Sbjct: 111 GGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFT 170

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y+    G  R  +    L LF     NG+     T +IL++ LCK G +  A + L  ++
Sbjct: 171 YSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLV 230

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             + G   + VI +T L++ Y + G+   A + +  M  ++I+ D + YN LING C   
Sbjct: 231 --NAGLVPTRVIYNT-LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 287

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            I++A     +M   G  P V T+NTL++   + G+L++       + + G+ P+ +SY 
Sbjct: 288 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG 347

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           +I+   C +G I +A   L  M  K V+P   ++N IID Y   G    AF + + M S 
Sbjct: 348 SIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 407

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+S ++ T+N LI        I +A  +   +    + PD  +YN LI A C  G+I  A
Sbjct: 408 GISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKA 467

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L L   M + GI   + TY +LI G    G + E E ++ K+    +   +    I+ + 
Sbjct: 468 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 527

Query: 551 YRRMKESDKARDIHQKWLLR 570
           Y +     KA D+ ++ L +
Sbjct: 528 YSKYGNEIKAEDLRKEMLQK 547



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 164/340 (48%), Gaps = 3/340 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  GK+  A  + + ++  G VP  + +N L+N  C+ G+LE A     +M    
Sbjct: 209 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 268

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYNA I G C+   +  A  L   M +NG+ P   T N L+ A  + G L    
Sbjct: 269 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 328

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E+    +     +V++   +++++ KNG   +A+A+ +DMF K++  +   YN +I
Sbjct: 329 IVLSEM---QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 385

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           + +  +G    AF    +M   G  P ++TYN L+  LC Q ++ EA      LS   + 
Sbjct: 386 DAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLI 445

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +SY T+I   C  G+I KA +    M +  +      ++ +I G G  G L+    +
Sbjct: 446 PDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYL 505

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
              M+   V  +    N ++ A ++ G+   A  L+KEML
Sbjct: 506 YQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 545



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 160/354 (45%), Gaps = 37/354 (10%)

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  +A+ G RP+    N  V A    G LG+AV  L  +    DG    +  +  +++  
Sbjct: 15  FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRM--GRDGAPPPNAFSYNVVIAG 72

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
            ++ G    A+ ++++M ++ +  + + YN +I+G    GD+ + F    QM+  G  P+
Sbjct: 73  MWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPN 132

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY--------------------- 369
            ITYN LL+ LC+ G++ E S     ++   + PD  +Y                     
Sbjct: 133 AITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFG 192

Query: 370 --------------KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
                           ++ GLC  G +  A E L S++   +VP   I+N +I+GY + G
Sbjct: 193 KYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG 252

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
           +L  AFS    M S  +  +  T+NALI    +   I +A  L  EM  +G+ P V T+N
Sbjct: 253 ELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFN 312

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            LI A    G +     +  EM   G+ P++++Y  ++   C  G + EA  + 
Sbjct: 313 TLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 366



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 135/315 (42%), Gaps = 38/315 (12%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D+  + A+I  LC   +I  A  L  +M   G  P V T N L++   + G LEK  
Sbjct: 269 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 328

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V+ EM E    PN  +Y + +  +C+  ++ +A+ +   M +  + PN   +N ++   
Sbjct: 329 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII--- 385

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
                                              D+Y ++G   QA  L   M    I 
Sbjct: 386 -----------------------------------DAYVEHGPNDQAFILVEKMKSNGIS 410

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             IV YN+LI G C    IS A      +     +PD ++YNTL++  C +G +D+A   
Sbjct: 411 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 470

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + K G+     +Y  +I GL   G + +       M++ +VVP   I N++++ Y +
Sbjct: 471 QQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 530

Query: 414 CGDLSNAFSIRDLML 428
            G+   A  +R  ML
Sbjct: 531 YGNEIKAEDLRKEML 545



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 3/210 (1%)

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            L   G+  +    +G+L+  G  PD  ++   +Q     GD+ +A   L  M  +   P
Sbjct: 1   ALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRM-GRDGAP 59

Query: 400 EPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P+   +NV+I G  R G   +A  + D M    V  N  T+N +I    +GG +   F 
Sbjct: 60  PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFR 119

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L+ +M+  G+ P+  TYN+L+   C  G +     L DEM  + + PD  TY+ L  G  
Sbjct: 120 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 179

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             G+ K    +F K    G+ I      IL
Sbjct: 180 RNGDSKAMLSLFGKYLKNGVTIGDYTCSIL 209



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 4/191 (2%)

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS-NVF 437
           H D+ +A   L S   +   P+   WN  +      GDL  A  +   M   G    N F
Sbjct: 8   HADVRRAFGILASAGAR---PDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAF 64

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           ++N +I    R G   DA  +  EM    + P+  TYN +I      G +    +L D+M
Sbjct: 65  SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 124

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
           +  G+ P+ ITY  L+ G C  G M E   +  ++ +  +  D   + IL     R  +S
Sbjct: 125 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 184

Query: 558 DKARDIHQKWL 568
                +  K+L
Sbjct: 185 KAMLSLFGKYL 195



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 106/245 (43%), Gaps = 43/245 (17%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  M++ G     L+ +   + +++   C  GKI  A+ +   M  K  +P+   +N ++
Sbjct: 331 LSEMQENG-----LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 385

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           +   + G  ++A  ++ +M     SP+  TYN  I G C  +++ +A  + ++++N+ + 
Sbjct: 386 DAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLI 445

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P+ V++N L+ A C +G                                    N DK  A
Sbjct: 446 PDAVSYNTLISACCYRG------------------------------------NIDK--A 467

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           L L   M +  I++ +  Y+ LI+G    G ++     + +M++   +P    +N ++  
Sbjct: 468 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 527

Query: 341 LCKQG 345
             K G
Sbjct: 528 YSKYG 532


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 221/418 (52%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  L L  K   A+ L  +M+ +G  PD+ T+  +VN LCK GD++ A  ++++M + 
Sbjct: 174 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 233

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +   +   Y   I   C    ++ AL+LF+ M N GIRPN VT+N L+  LC  G   DA
Sbjct: 234 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 293

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +++   + K   +V+T + L+D++ K G   +A  L+++M +++I  DI  Y+ L
Sbjct: 294 SRLLSDMI---ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 350

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           INGFC++  +  A   F  M+ +   P+V+TYNTL+   CK  +++E    +  +S+ G+
Sbjct: 351 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 410

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             + ++Y T+IQGL   GD   A++    M+   V P+   +++++DG  + G L  A  
Sbjct: 411 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 470

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + +    +  +++T+N +I    + G + D + L   + L G+ P+V  Y  +I   C
Sbjct: 471 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 530

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             G    A  L+ EM   G  P+  TY  LI+     G+   + E+  ++++ G   D
Sbjct: 531 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 588



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 242/491 (49%), Gaps = 16/491 (3%)

Query: 85  AVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKM 144
           A  N  DL++    +R++ +R        +  D   +  +I   C   ++  AL +  KM
Sbjct: 75  AKMNKFDLVISLG-ERMQNLR--------ISYDLYSYNILINCFCRRSQLPLALAVLGKM 125

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           ++ G  PD++T + L+N  C    + +A  ++ +M  M   PN  T+N  I G    N+ 
Sbjct: 126 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKA 185

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
            +A+ L   M   G +P+  T+  +V+ LCK+G +  A+  L ++   + GK  +DV+  
Sbjct: 186 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM---EKGKIEADVVIY 242

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T ++D+     +   AL L+ +M  K I+ ++V YN LI   C  G  S A      M++
Sbjct: 243 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 302

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           R   P+V+T++ L++   K+GKL EA   Y  + K  + PD  +Y ++I G C+H  + +
Sbjct: 303 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 362

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A+     M+ K   P    +N +I G+ +   +     +   M   G+  N  T+N LI 
Sbjct: 363 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 422

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              + G    A  + K+M+ DG+ PD+ TY++L+   C  G +  AL +++ + +  + P
Sbjct: 423 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 482

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR--MKESDKA-- 560
           DI TY  +I+G C  G +++  ++F  +   G+  + I +  +   + R  +KE   A  
Sbjct: 483 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 542

Query: 561 RDIHQKWLLRN 571
           R++ +   L N
Sbjct: 543 REMKEDGTLPN 553



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 223/458 (48%), Gaps = 8/458 (1%)

Query: 90  LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
           LDL L + +D    M  + P+   +E  + + ++ I  +    K    + L  +M     
Sbjct: 41  LDLKLDDAVDLFGEMVQSRPLPSIVE--FNKLLSAIAKM---NKFDLVISLGERMQNLRI 95

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
             D+ ++N L+N  C+   L  A  V+ +M ++   P+  T ++ + GYC    + +A+ 
Sbjct: 96  SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 155

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L   M     +PN VT N L+H L       +AV  +  ++A        D+ T   +++
Sbjct: 156 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG---CQPDLFTYGTVVN 212

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K GD   AL+L   M +  I+ D+V Y  +I+  C   +++ A   F +M  +G  P
Sbjct: 213 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 272

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           +V+TYN+L+ CLC  G+  +AS     + +  + P+ +++  +I      G +V+A +  
Sbjct: 273 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 332

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M+++S+ P+   ++ +I+G+     L  A  + +LM+S     NV T+N LI    + 
Sbjct: 333 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 392

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             + +   L +EM   G+  +  TYN LI      G   +A +++ +M+  G+ PDIITY
Sbjct: 393 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 452

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + L+ G C  G +++A  VF  +Q   +  D   + I+
Sbjct: 453 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 490



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 217/431 (50%), Gaps = 5/431 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           DYR  ++  R++ L  K+  A+ L  +M+Q   +P ++  N L++ + K+   +    + 
Sbjct: 30  DYREKLS--RNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLG 87

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M  +R S +  +YN  I  +CR ++L  AL +   M   G  P+ VT + L++  C  
Sbjct: 88  ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 147

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             + +AV  + ++   +      + +T   L+   F +    +A+AL + M  +  Q D+
Sbjct: 148 KRISEAVALVDQMFVME---YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 204

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y  ++NG C  GDI  A +   +M K     DV+ Y T+++ LC    +++A + +  
Sbjct: 205 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 264

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G+ P+ ++Y ++I+ LC +G    A   L  M+E+ + P    ++ +ID + + G 
Sbjct: 265 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 324

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L  A  + D M+   +  ++FT+++LI        + +A  + + M+    FP+V TYN 
Sbjct: 325 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 384

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C    +   ++L+ EM +RG+  + +TY  LI+G    G+   A+++F K+ + G
Sbjct: 385 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444

Query: 537 LAIDHIPFRIL 547
           +  D I + IL
Sbjct: 445 VPPDIITYSIL 455



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 202/403 (50%), Gaps = 9/403 (2%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           L+ A  +  EM + RP P+   +N  ++   ++N+ D  + L   M N  I  +  ++NI
Sbjct: 45  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L++  C++  L  A+  LG+++         D++T + L++ Y       +A+AL + MF
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMK---LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 161

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
               Q + V +N LI+G  L+   S A A   +M+ RG  PD+ TY T++N LCK+G +D
Sbjct: 162 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 221

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            A      + K  +  D + Y TII  LC + ++  A      M  K + P    +N +I
Sbjct: 222 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 281

Query: 409 D---GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
                YGR  D S   S    M+   ++ NV TF+ALI A  + G + +A  L  EM+  
Sbjct: 282 RCLCNYGRWSDASRLLSD---MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 338

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            I PD+FTY+ LI   C    +  A  +++ M+ +   P+++TY  LIKG C    ++E 
Sbjct: 339 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 398

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            E+F ++   GL  + + +  L +   +  + D A+ I +K +
Sbjct: 399 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 441



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 145/287 (50%), Gaps = 3/287 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I      GK+  A  L  +MI++   PD+ T++ L+N  C    L++A H+   M   
Sbjct: 314 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 373

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN  I G+C+   +++ + LF  M+  G+  N VT+N L+  L + G    A
Sbjct: 374 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 433

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   ++++D       D+IT +IL+D   K G   +AL ++  + +  ++ DI  YN++
Sbjct: 434 QKIFKKMVSDG---VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 490

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G C  G +   +  FC +  +G  P+VI Y T+++  C++G  +EA   +  + + G 
Sbjct: 491 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 550

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
            P+  +Y T+I+     GD   + E +  M     V +    +++I+
Sbjct: 551 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 597



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 143/298 (47%), Gaps = 7/298 (2%)

Query: 82  NPQAV-FNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
           NP  V F+AL D  +KE  L   + + D   ++ +++ D   + ++I   C+  ++  A 
Sbjct: 306 NPNVVTFSALIDAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDRLDEAK 364

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            +   MI K   P+V+T+N L+   CK   +E+   + REMS+     N  TYN  I G 
Sbjct: 365 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 424

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            +  + D A  +F  M ++G+ P+ +T++IL+  LCK G L  A+    E L     K  
Sbjct: 425 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF-EYL--QKSKME 481

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            D+ T  I+++   K G       L+  +  K ++ +++ Y  +I+GFC  G    A A 
Sbjct: 482 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 541

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           F +M + G LP+  TYNTL+    + G    ++     +   G   D  +   +I  L
Sbjct: 542 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 599


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 216/436 (49%), Gaps = 4/436 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVP-DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           G +G A+ + R+M + G  P +  ++N ++  + + G    A  V  EM+E    PN  T
Sbjct: 174 GDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHIT 233

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I G+ +  +L+    L   M  +G++PN +T+N+L+  LC+ G +G+    L E+ 
Sbjct: 234 YNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 293

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
           +    K   D  T +IL D   +NGD    L+L+    +  +       ++L+NG C +G
Sbjct: 294 SQ---KMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDG 350

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +S A      ++  G +P  + YNTL+N  C+ G+L+ A   +G +    + PD I+Y 
Sbjct: 351 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 410

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +I GLC    I  A++ L+ M +  V P    +N +ID YGR G L   F +   M   
Sbjct: 411 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 470

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+  NV ++ +++ A  + G I +A ++  +M    + P+   YN +I A    G    A
Sbjct: 471 GLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQA 530

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
             L ++M   GI+P I+TY  LIKG C +  + EAEE+   +    L  D + +  L   
Sbjct: 531 FILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISA 590

Query: 551 YRRMKESDKARDIHQK 566
                  DKA D+ Q+
Sbjct: 591 CCYRGNIDKALDLQQR 606



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 216/440 (49%), Gaps = 3/440 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           GG +     LR +M+  G  P+ +T+N L++ LC+ G + +   ++ EM+  +  P+  T
Sbjct: 244 GGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFT 303

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y+    G  R  +    L LF     NG+     T +IL++ LCK G +  A + L  ++
Sbjct: 304 YSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLV 363

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             + G   + VI +T L++ Y + G+   A + +  M  ++I+ D + YN LING C   
Sbjct: 364 --NAGLVPTRVIYNT-LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 420

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            I++A     +M   G  P V T+NTL++   + G+L++       + + G+ P+ +SY 
Sbjct: 421 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG 480

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           +I+   C +G I +A   L  M  K V+P   ++N IID Y   G    AF + + M S 
Sbjct: 481 SIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 540

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+S ++ T+N LI        I +A  +   +    + PD  +YN LI A C  G+I  A
Sbjct: 541 GISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKA 600

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L L   M + GI   + TY +LI G    G + E E ++ K+    +   +    I+ + 
Sbjct: 601 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEA 660

Query: 551 YRRMKESDKARDIHQKWLLR 570
           Y +     KA D+ ++ L +
Sbjct: 661 YSKYGNEIKAEDLRKEMLQK 680



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 163/340 (47%), Gaps = 3/340 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  GK+  A  + + ++  G VP  + +N L+N  C+ G+LE A     +M    
Sbjct: 342 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 401

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYNA I G C+   +  A  L   M +NG+ P   T N L+ A  + G L    
Sbjct: 402 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 461

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E+    +     +V++   +++++ KNG   +A+A+ +DMF K++  +   YN +I
Sbjct: 462 IVLSEM---QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 518

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           + +  +G    AF    +M   G  P ++TYN L+  LC Q ++ EA      LS   + 
Sbjct: 519 DAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLI 578

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +SY T+I   C  G+I KA +    M +  +      ++ +I G G  G L     +
Sbjct: 579 PDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYL 638

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
              M+   V  +    N ++ A ++ G+   A  L+KEML
Sbjct: 639 YQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 678



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 136/315 (43%), Gaps = 38/315 (12%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D+  + A+I  LC   +I  A  L  +M   G  P V T N L++   + G LEK  
Sbjct: 402 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 461

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V+ EM E    PN  +Y + +  +C+  ++ +A+ +   M +  + PN   +N ++   
Sbjct: 462 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII--- 518

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
                                              D+Y ++G   QA  L   M    I 
Sbjct: 519 -----------------------------------DAYVEHGPNDQAFILVEKMKSNGIS 543

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             IV YN+LI G C    IS A      +     +PD ++YNTL++  C +G +D+A   
Sbjct: 544 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 603

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + K G+     +Y  +I GL   G +++       M++ +VVP   I N++++ Y +
Sbjct: 604 QQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 663

Query: 414 CGDLSNAFSIRDLML 428
            G+   A  +R  ML
Sbjct: 664 YGNEIKAEDLRKEML 678



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 3/225 (1%)

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           R  LP + + N LL  L   G+  +    +G+L+  G  PD  ++   +Q     GD+ +
Sbjct: 119 RAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGE 178

Query: 385 AREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
           A   L  M  +   P P+   +NV+I G  R G   +A  + D M    V  N  T+N +
Sbjct: 179 AVGMLRRM-GRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTM 237

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    +GG +   FSL+ +M+  G+ P+  TYN+L+   C  G +     L DEM  + +
Sbjct: 238 IDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 297

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            PD  TY+ L  G    G+ K    +F K    G+ I      IL
Sbjct: 298 VPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSIL 342



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 107/225 (47%), Gaps = 8/225 (3%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  M++ G     L+ +   + +++   C  GKI  A+ +   M  K  +P+   +N ++
Sbjct: 464 LSEMQENG-----LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 518

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           +   + G  ++A  ++ +M     SP+  TYN  I G C  +++ +A  + ++++N+ + 
Sbjct: 519 DAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLI 578

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P+ V++N L+ A C +G +  A+  L + +     K+T  V T   L+      G   + 
Sbjct: 579 PDAVSYNTLISACCYRGNIDKALD-LQQRMHKYGIKST--VRTYHQLISGLGGAGRLIEM 635

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
             L+  M Q N+      +N+++  +   G+   A     +ML++
Sbjct: 636 EYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 221/418 (52%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  L L  K   A+ L  +M+ +G  PD+ T+  +VN LCK GD++ A  ++++M + 
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +   +   Y   I   C    ++ AL+LF+ M N GIRPN VT+N L+  LC  G   DA
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 309

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +++   + K   +V+T + L+D++ K G   +A  L+++M +++I  DI  Y+ L
Sbjct: 310 SRLLSDMI---ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           INGFC++  +  A   F  M+ +   P+V+TYNTL+   CK  +++E    +  +S+ G+
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             + ++Y T+IQGL   GD   A++    M+   V P+   +++++DG  + G L  A  
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + +    +  +++T+N +I    + G + D + L   + L G+ P+V  Y  +I   C
Sbjct: 487 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 546

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             G    A  L+ EM   G  P+  TY  LI+     G+   + E+  ++++ G   D
Sbjct: 547 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 604



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 242/491 (49%), Gaps = 16/491 (3%)

Query: 85  AVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKM 144
           A  N  DL++    +R++ +R        +  D   +  +I   C   ++  AL +  KM
Sbjct: 91  AKMNKFDLVISLG-ERMQNLR--------ISYDLYSYNILINCFCRRSQLPLALAVLGKM 141

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           ++ G  PD++T + L+N  C    + +A  ++ +M  M   PN  T+N  I G    N+ 
Sbjct: 142 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKA 201

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
            +A+ L   M   G +P+  T+  +V+ LCK+G +  A+  L ++   + GK  +DV+  
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM---EKGKIEADVVIY 258

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T ++D+     +   AL L+ +M  K I+ ++V YN LI   C  G  S A      M++
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           R   P+V+T++ L++   K+GKL EA   Y  + K  + PD  +Y ++I G C+H  + +
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A+     M+ K   P    +N +I G+ +   +     +   M   G+  N  T+N LI 
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              + G    A  + K+M+ DG+ PD+ TY++L+   C  G +  AL +++ + +  + P
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR--MKESDKA-- 560
           DI TY  +I+G C  G +++  ++F  +   G+  + I +  +   + R  +KE   A  
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558

Query: 561 RDIHQKWLLRN 571
           R++ +   L N
Sbjct: 559 REMKEDGTLPN 569



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 223/458 (48%), Gaps = 8/458 (1%)

Query: 90  LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
           LDL L + +D    M  + P+   +E  + + ++ I  +    K    + L  +M     
Sbjct: 57  LDLKLDDAVDLFGEMVQSRPLPSIVE--FNKLLSAIAKM---NKFDLVISLGERMQNLRI 111

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
             D+ ++N L+N  C+   L  A  V+ +M ++   P+  T ++ + GYC    + +A+ 
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 171

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L   M     +PN VT N L+H L       +AV  +  ++A        D+ T   +++
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG---CQPDLFTYGTVVN 228

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K GD   AL+L   M +  I+ D+V Y  +I+  C   +++ A   F +M  +G  P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           +V+TYN+L+ CLC  G+  +AS     + +  + P+ +++  +I      G +V+A +  
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M+++S+ P+   ++ +I+G+     L  A  + +LM+S     NV T+N LI    + 
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             + +   L +EM   G+  +  TYN LI      G   +A +++ +M+  G+ PDIITY
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + L+ G C  G +++A  VF  +Q   +  D   + I+
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 217/431 (50%), Gaps = 5/431 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           DYR  ++  R++ L  K+  A+ L  +M+Q   +P ++  N L++ + K+   +    + 
Sbjct: 46  DYREKLS--RNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLG 103

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M  +R S +  +YN  I  +CR ++L  AL +   M   G  P+ VT + L++  C  
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 163

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             + +AV  + ++   +      + +T   L+   F +    +A+AL + M  +  Q D+
Sbjct: 164 KRISEAVALVDQMFVME---YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL 220

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y  ++NG C  GDI  A +   +M K     DV+ Y T+++ LC    +++A + +  
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G+ P+ ++Y ++I+ LC +G    A   L  M+E+ + P    ++ +ID + + G 
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L  A  + D M+   +  ++FT+++LI        + +A  + + M+    FP+V TYN 
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C    +   ++L+ EM +RG+  + +TY  LI+G    G+   A+++F K+ + G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460

Query: 537 LAIDHIPFRIL 547
           +  D I + IL
Sbjct: 461 VPPDIITYSIL 471



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 202/403 (50%), Gaps = 9/403 (2%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           L+ A  +  EM + RP P+   +N  ++   ++N+ D  + L   M N  I  +  ++NI
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L++  C++  L  A+  LG+++         D++T + L++ Y       +A+AL + MF
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLG---YEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
               Q + V +N LI+G  L+   S A A   +M+ RG  PD+ TY T++N LCK+G +D
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            A      + K  +  D + Y TII  LC + ++  A      M  K + P    +N +I
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297

Query: 409 D---GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
                YGR  D S   S    M+   ++ NV TF+ALI A  + G + +A  L  EM+  
Sbjct: 298 RCLCNYGRWSDASRLLSD---MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            I PD+FTY+ LI   C    +  A  +++ M+ +   P+++TY  LIKG C    ++E 
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            E+F ++   GL  + + +  L +   +  + D A+ I +K +
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 145/287 (50%), Gaps = 3/287 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I      GK+  A  L  +MI++   PD+ T++ L+N  C    L++A H+   M   
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN  I G+C+   +++ + LF  M+  G+  N VT+N L+  L + G    A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   ++++D       D+IT +IL+D   K G   +AL ++  + +  ++ DI  YN++
Sbjct: 450 QKIFKKMVSDG---VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G C  G +   +  FC +  +G  P+VI Y T+++  C++G  +EA   +  + + G 
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
            P+  +Y T+I+     GD   + E +  M     V +    +++I+
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 143/298 (47%), Gaps = 7/298 (2%)

Query: 82  NPQAV-FNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
           NP  V F+AL D  +KE  L   + + D   ++ +++ D   + ++I   C+  ++  A 
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            +   MI K   P+V+T+N L+   CK   +E+   + REMS+     N  TYN  I G 
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            +  + D A  +F  M ++G+ P+ +T++IL+  LCK G L  A+    E L     K  
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF-EYL--QKSKME 497

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            D+ T  I+++   K G       L+  +  K ++ +++ Y  +I+GFC  G    A A 
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           F +M + G LP+  TYNTL+    + G    ++     +   G   D  +   +I  L
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 241/471 (51%), Gaps = 19/471 (4%)

Query: 114 LETDYRRHV----AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
            ET  R +V     ++  LC  G+I  A+ L  +M++ G  P  +T+  +V+ +CKIGD 
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDT 235

Query: 170 EKADHVIREMSEMRPS-PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
             A  ++R+M E+    PN   Y+A I   C+      A +LF+ M   GI P+  T+N 
Sbjct: 236 VSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++   C  G   DA + L E+L   + K + DV+T   L++++ K G  F+A  L+++M 
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEML---ERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            + I  + + Y+ +I+GFC    + +A   F  M  +G  P++IT+NTL++  C   ++D
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           +       +++TG+  D  +Y T+I G  + GD+  A + L  M+   + P+    + ++
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 409 DGYGRCGDLSNAFSI--------RDLMLSF---GVSSNVFTFNALILAETRGGSIFDAFS 457
           DG    G L +A  +        +DL  S    GV  +V T+N LI      G   +A  
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L +EM   GI PD  TY+ +I   C    +  A Q++D M  +  +P+++T+T LI G+C
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             G + +  E+F ++   G+  + I +  L   +R++   + A DI Q+ +
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 234/500 (46%), Gaps = 52/500 (10%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +RC    D      +I+  C   K+  AL    K+ + G  PDV+T N L++ LC    +
Sbjct: 110 IRC----DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRV 165

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A ++  +M E    PN  T+   + G CR   + +A+ L   M  +G++P ++T+  +
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL------ 283
           V  +CK G    A+  L ++  ++      +V+  + ++DS  K+G    A  L      
Sbjct: 226 VDGMCKIGDTVSALDLLRKM--EEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 284 ----------------------WND-------MFQKNIQTDIVAYNVLINGFCLNGDISS 314
                                 W+D       M ++ I  D+V YN LIN F   G    
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A   + +ML RG +P+ ITY+++++  CKQ +LD A H + +++  G +P+ I++ T+I 
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C    I    E L  M E  +V +   +N +I G+   GDL+ A  +   M+S G+  
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEML-----------LDGIFPDVFTYNLLIGASCN 483
           ++ T + L+      G + DA  + K M             +G+ PDV TYN+LI    N
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G    A +LY+EM  RGI PD ITY+ +I G C +  + EA ++F  + +   + + + 
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583

Query: 544 FRILKKRYRRMKESDKARDI 563
           F  L   Y +    D   ++
Sbjct: 584 FTTLINGYCKAGRVDDGLEL 603



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 213/424 (50%), Gaps = 14/424 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  LC  G+   A  L  +M +KG  PD+ T+N ++   C  G    A+ +++EM 
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E + SP+  TYNA I  + +  +  +A  L+  M   GI PN +T++ ++   CK+  L 
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL- 376

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA + +  ++A      + ++IT   L+D Y         + L ++M +  +  D   YN
Sbjct: 377 DAAEHMFYLMATK--GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+GF L GD+++A     +M+  G  PD++T +TLL+ LC  GKL +A   + V+ K+
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494

Query: 361 -----------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
                      GV PD  +Y  +I GL   G  ++A E    M  + +VP+   ++ +ID
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  +   L  A  + D M S   S NV TF  LI    + G + D   L  EM   GI  
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +  TY  LI     +G+I+ AL ++ EM+  G+ PD IT   ++ G  ++  +K A  + 
Sbjct: 615 NAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674

Query: 530 AKIQ 533
            K+Q
Sbjct: 675 EKLQ 678



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 197/398 (49%), Gaps = 4/398 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            + L +KM +K    D+ +   L+   C    L  A     +++++   P+  T+N  + 
Sbjct: 98  VISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLH 157

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C  + + +AL+LF  M     RPN VT   L++ LC++G + +AV  L  ++  +DG 
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM--EDGL 215

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSA 315
             + +   TI+ D   K GD   AL L   M +  +I  ++V Y+ +I+  C +G  S A
Sbjct: 216 QPTQITYGTIV-DGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDA 274

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F +M ++G  PD+ TYN+++   C  G+  +A      + +  ++PD ++Y  +I  
Sbjct: 275 QNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
               G   +A E    ML + ++P    ++ +IDG+ +   L  A  +  LM + G S N
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           + TFN LI        I D   L  EM   G+  D  TYN LI     +G ++ AL L  
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           EM+  G+ PDI+T   L+ G C  G +K+A E+F  +Q
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 188/414 (45%), Gaps = 22/414 (5%)

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           +I  LE A  +  +M   RP P+   +   +    R+   D  + L+  M    IR +  
Sbjct: 56  EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIY 115

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           +  IL+   C    L  A+   G++          DV+T   L+          +AL L+
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITK---LGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           + MF+   + ++V +  L+NG C  G I  A A   +M++ G  P  ITY T+++ +CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKI 232

Query: 345 G----------KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           G          K++E SH         + P+ + Y  II  LC  G    A+     M E
Sbjct: 233 GDTVSALDLLRKMEEISH---------IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K + P+   +N +I G+   G  S+A  +   ML   +S +V T+NALI A  + G  F+
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L  EML  GI P+  TY+ +I   C    +  A  ++  M  +G +P++IT+  LI 
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+C    + +  E+  ++   GL  D   +  L   +  + + + A D+ Q+ +
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 165/342 (48%), Gaps = 16/342 (4%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   + A+I      GK   A  L  +M+ +G +P+ +T++ +++  CK   L+ A+
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           H+   M+    SPN  T+N  I GYC    +D  + L   M   G+  +  T+N L+H  
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN-- 291
              G L  A+  L E+++        D++T   L+D    NG    AL ++  M QK+  
Sbjct: 441 YLVGDLNAALDLLQEMIS---SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM-QKSKK 496

Query: 292 ----------IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
                     ++ D+  YN+LI+G    G    A   + +M  RG +PD ITY+++++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CKQ +LDEA+  +  +     +P+ +++ T+I G C  G +    E    M  + +V   
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
             +  +I G+ + G+++ A  I   M+S GV  +  T   ++
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 140/292 (47%), Gaps = 34/292 (11%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            ++L+  M +K I+ DI ++ +LI  FC    +  A + F ++ K G  PDV+T+NTLL+
Sbjct: 98  VISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLH 157

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LC + ++ EA + +  + +T   P+ +++ T++ GLC  G IV+A   L  M+E  + P
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +  I+DG  + GD  +A  +                                  L+
Sbjct: 218 TQITYGTIVDGMCKIGDTVSALDL----------------------------------LR 243

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           K   +  I P+V  Y+ +I + C  G    A  L+ EM  +GI PD+ TY  +I G C+ 
Sbjct: 244 KMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           G   +AE++  ++    ++ D + +  L   + +  +  +A +++ + L R 
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 138/342 (40%), Gaps = 73/342 (21%)

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLP-------------------------------- 329
           L +GF     +  A   F  ML+   LP                                
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 330 ---DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI-------- 378
              D+ ++  L+ C C   KL  A   +G ++K G+ PD +++ T++ GLC+        
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 379 ---------------------------HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                                       G IV+A   L  M+E  + P    +  I+DG 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 412 GRCGDLSNAFSIRDLMLSFG-VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            + GD  +A  +   M     +  NV  ++A+I +  + G   DA +L  EM   GIFPD
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           +FTYN +I   C+ G    A QL  EML R I+PD++TY  LI      G   EAEE++ 
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           ++   G+  + I +  +   + +    D A   H  +L+  K
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAE--HMFYLMATK 389



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 6/164 (3%)

Query: 94  LKENLDRLKTMR------DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           LK+ L+  K M+      D       +E D + +  +I  L   GK   A  L  +M  +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VPD +T++ +++ LCK   L++A  +   M     SPN  T+   I GYC+   +D  
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           L LF  M   GI  N +T+  L+    K G +  A+    E+++
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMIS 644


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 207/408 (50%), Gaps = 3/408 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M ++G  P+V  +N L+  LC+   +  A+ +  EM  +    +  TYN  I GYC+V E
Sbjct: 202 MRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGE 261

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           LD A  +   M    + PN +T N L+  LCK   + +A   L E+  +       D  T
Sbjct: 262 LDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNG---FMPDGYT 318

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            +IL D   +  D   A+ L+    +K I+ +    ++L+NG C  G +  A     +  
Sbjct: 319 YSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFT 378

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           + G + D + YNT +N  C+ G +++A      +   G+ P+ I++ ++I   C   ++ 
Sbjct: 379 ENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMD 438

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           KA E++  M EK V P    +N +IDGYG+       F I + M   GV  NV ++ +LI
Sbjct: 439 KAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLI 498

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G I +A  + ++M+  G+ P+   YN+LI  SC +G +  AL+ +DEM+R  I+
Sbjct: 499 NCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEIS 558

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           P ++TY  LI G C +G + EAE+   +I + G + D I +  L   Y
Sbjct: 559 PTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGY 606



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 227/446 (50%), Gaps = 4/446 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G++  A  +R +M +K   P+++T N L++ LCK+  +++A  +++EM   
Sbjct: 251 TLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVN 310

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY+    G  R ++ + A+ L+      GIR N  T +IL++ LCK+G +  A
Sbjct: 311 GFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKA 370

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +    ++G    +VI +T  ++ Y + GD  +A+     M    ++ + + +N L
Sbjct: 371 EEILKKF--TENGLVADEVIYNT-FVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSL 427

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+ FC   ++  A  +  +M ++G  P V TYNTL++   K    D        + + GV
Sbjct: 428 IDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGV 487

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ +SY ++I  LC  G I++A   L  M+ + V+P   ++N++IDG    G + +A  
Sbjct: 488 KPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALR 547

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
             D M+   +S  + T+N LI    + G + +A     ++   G  PDV TYN LI    
Sbjct: 548 FFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYA 607

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           N G++   L LY+ M   GI P + TY  LI G C++  ++  E+++ ++  + L  D +
Sbjct: 608 NAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRV 666

Query: 543 PFRILKKRYRRMKESDKARDIHQKWL 568
            +  +   Y  +  + KA  +HQ  L
Sbjct: 667 VYNAMIHCYAEIGNTQKAYSLHQGML 692



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 210/420 (50%), Gaps = 4/420 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L  +  +KG   +  T + L+N LCK G +EKA+ ++++ +E     +   YN F+ 
Sbjct: 335 AMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVN 394

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           GYCR+ +++KA+     M + G+RPN +T N L+   C    +  A +++ ++    +  
Sbjct: 395 GYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMA---EKG 451

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
            T  V T   L+D Y K     +   +   M +  ++ ++V+Y  LIN  C +G I  A 
Sbjct: 452 VTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAE 511

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
                M+ RG LP+   YN L++  C  GK+ +A  F+  + ++ ++P  ++Y  +I GL
Sbjct: 512 IVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGL 571

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G + +A +FL  +      P+   +N +I GY   G++S    + + M + G+   V
Sbjct: 572 CKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTV 631

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T++ LI   ++ G I     L  EML   + PD   YN +I     +G+   A  L+  
Sbjct: 632 RTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQG 690

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           ML +GI PD +TY  LI GH   G +   +++   ++   LA     + IL K +  +K+
Sbjct: 691 MLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKD 750



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 212/456 (46%), Gaps = 38/456 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  GK+  A  + +K  + G V D + +N  VN  C+IGD+ KA   I  M    
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG 416

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T+N+ I  +C + E+DKA      MA  G+ P+  T+N L+    K        
Sbjct: 417 LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCF 476

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L ++   ++     +V++   L++   K+G   +A  +  DM  + +  +   YN+LI
Sbjct: 477 QILEQM---EEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLI 533

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C+ G +  A  +F +M++    P ++TYN L++ LCK+GKL EA  F   ++ +G +
Sbjct: 534 DGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHS 593

Query: 364 PDQISYKTIIQGLCIHGDIVK----------------------------------AREFL 389
           PD I+Y ++I G    G++ K                                    +  
Sbjct: 594 PDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLY 653

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             ML+ +++P+  ++N +I  Y   G+   A+S+   ML  G+  +  T+N+LIL   R 
Sbjct: 654 NEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFRE 713

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + +   L   M    + P   TY++L+   C+L     A   Y EM+     P+    
Sbjct: 714 GKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASIC 773

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            EL  G    G ++E + + +++   G+ I+H P +
Sbjct: 774 NELTAGLEQEGRLQEVQVICSEMNVKGI-INHWPSK 808



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 136/287 (47%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            +   + M ++ ++ ++  YNVLI G C    I  A   F +M     +  ++TYNTL++
Sbjct: 195 GMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLID 254

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             CK G+LD A      + +  VAP+ I++ +++ GLC    + +AR  L  M     +P
Sbjct: 255 GYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMP 314

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           + + ++++ DG  RC D + A  + +     G+  N +T + L+    + G +  A  + 
Sbjct: 315 DGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEIL 374

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           K+   +G+  D   YN  +   C +G ++ A+   + M   G+ P+ IT+  LI   C  
Sbjct: 375 KKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDM 434

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             M +AEE   K+   G+      +  L   Y ++   D+   I ++
Sbjct: 435 KEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQ 481



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 140/297 (47%), Gaps = 8/297 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC  GKI  A  + R MI +G +P+   +N L++  C +G ++ A     EM   
Sbjct: 496 SLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRS 555

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SP   TYN  I G C+  +L +A    + + ++G  P+ +T+N L+         G+ 
Sbjct: 556 EISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANA---GNV 612

Query: 243 VKFLG--EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            K LG  E + +   K T  V T   L+    K G +     L+N+M Q N+  D V YN
Sbjct: 613 SKCLGLYETMKNLGIKPT--VRTYHPLISGCSKEGIEL-VEKLYNEMLQMNLLPDRVVYN 669

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I+ +   G+   A++    ML +G  PD +TYN+L+    ++GKL         +   
Sbjct: 670 AMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAK 729

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
            +AP   +Y  +++G C   D   A  +   M+E + +P   I N +  G  + G L
Sbjct: 730 ELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRL 786



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 4/213 (1%)

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +  +G   D   Y   IQ      ++    EFL SM ++ V P   I+NV+I G  R   
Sbjct: 167 IENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKR 226

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           + +A  + D M +  +  ++ T+N LI    + G +  AF +++ M    + P++ T+N 
Sbjct: 227 IRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNS 286

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG--HCARGNMKEAEEVFAKIQT 534
           L+   C +  +  A  L  EM   G  PD  TY+ L  G   C  GN   A E++ +   
Sbjct: 287 LLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGN--GAMELYEQATE 344

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
            G+ I++    IL     +  + +KA +I +K+
Sbjct: 345 KGIRINNYTGSILLNGLCKQGKVEKAEEILKKF 377


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 237/448 (52%), Gaps = 4/448 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC    +  A  L  KM   G  P+V+ ++ L+      G +E+A  ++  MS  
Sbjct: 443 AMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCS 502

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+   YNA I+   +  ++++A      +   G++P+ VT    +    K G + +A
Sbjct: 503 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 562

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K+  E+L  D G   ++ +  T+L++ +FK G+  +AL+++  +    +  D+   +  
Sbjct: 563 AKYFDEML--DHGLMPNNPLY-TVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAF 619

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G   NG +  A   F ++ ++G +PDV TY++L++  CKQG++++A   +  +   G+
Sbjct: 620 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 679

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           AP+   Y  ++ GLC  GDI +AR+    M EK + P+   ++ +IDGY +  +++ AFS
Sbjct: 680 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 739

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M S GV  + F +NAL+    + G +  A +L +EML  G F    ++N LI   C
Sbjct: 740 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYC 798

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               I  A QL+ EM+ + I PD +TYT +I  HC  G M+EA  +F ++Q   L +D +
Sbjct: 799 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV 858

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLR 570
            +  L   Y ++ +S +   + +K + +
Sbjct: 859 TYTSLMYGYNKLGQSSEVFALFEKMVAK 886



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 226/463 (48%), Gaps = 38/463 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  +C  G I  A+ L+R M +KG VP+  T+  +   LC+   + +A     EM +  
Sbjct: 269 VIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTG 328

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+    +A I G+ R  ++D+ L +   M + GI  N +T+N+L+H LCK G +  A 
Sbjct: 329 LKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAA 388

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L  ++         +  T  +L++ Y +  +  +AL L ++M ++N+    V+Y  +I
Sbjct: 389 EILKGMVTLG---CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMI 445

Query: 304 NGFCLNGDISSA-----------------------FAYFCQ------------MLKRGFL 328
           NG C   D+S A                        AY  +            M   G  
Sbjct: 446 NGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVA 505

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           PD+  YN +++CL K GK++EAS +   +   G+ PD +++   I G    G + +A ++
Sbjct: 506 PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKY 565

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              ML+  ++P   ++ V+I+G+ + G+L  A SI   + + GV  +V T +A I    +
Sbjct: 566 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLK 625

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G + +A  +  E+   G+ PDVFTY+ LI   C  G +  A +L+DEM  +GI P+I  
Sbjct: 626 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 685

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           Y  L+ G C  G+++ A ++F  +   GL  D + +  +   Y
Sbjct: 686 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 728



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 213/410 (51%), Gaps = 4/410 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G +  AL + R++   G +PDV T +  ++ L K G +++A  V  E+ E    P+  T
Sbjct: 591 AGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 650

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y++ I+G+C+  E++KA  L   M   GI PN   +N LV  LCK G +  A K    + 
Sbjct: 651 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM- 709

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
              +     D +T + ++D Y K+ +  +A +L+++M  K +Q     YN L++G C  G
Sbjct: 710 --PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 767

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           D+  A   F +ML++GF    +++NTL++  CK  K+ EAS  +  +    + PD ++Y 
Sbjct: 768 DMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 826

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T+I   C  G + +A      M E++++ +   +  ++ GY + G  S  F++ + M++ 
Sbjct: 827 TVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK 886

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV  +  T+  +I A  +  ++ +AF L+ E++  G+      ++LLI A C    +  A
Sbjct: 887 GVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 946

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            +L DEM   G+ P +     L++     G M EA  VF  +++LGL  D
Sbjct: 947 SKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 996



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 222/475 (46%), Gaps = 16/475 (3%)

Query: 71  WFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETD-----YRRHVAVI 125
           WF N      G+   VF+    IL ++  R+  + +   V    + D       R  +++
Sbjct: 149 WFRNYG----GSSPVVFD----ILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLL 200

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           +DL   G +     +   M+      DV T+ YLV  LCK GDL  A  V+ EM E   +
Sbjct: 201 KDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLN 260

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           PN   Y+  I G C+V ++D+A+ L  +M   G+ PN  T+ I+   LC+   + +A K 
Sbjct: 261 PNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEA-KL 319

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             E +     K   D    + L+D + + GD  + L + + M    I  +++ YNVLI+G
Sbjct: 320 TFEEMQKTGLKP--DYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHG 377

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C  G +  A      M+  G  P+  T+  L+   C++  +  A      + K  + P 
Sbjct: 378 LCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPS 437

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            +SY  +I GLC   D+  A + L  M    + P   +++++I  Y   G +  A  + D
Sbjct: 438 AVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLD 497

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   GV+ ++F +NA+I   ++ G + +A +   E+   G+ PD  T+   I      G
Sbjct: 498 GMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTG 557

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            +  A + +DEML  G+ P+   YT LI GH   GN+ EA  +F ++  LG+  D
Sbjct: 558 KMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPD 612



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 216/434 (49%), Gaps = 4/434 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A     +M+  G +P+   +  L+N   K G+L +A  + R +  +   P+  T 
Sbjct: 557 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTC 616

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +AFI G  +   + +AL +FS +   G+ P+  T++ L+   CK+G +  A +   E+  
Sbjct: 617 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 676

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   ++     L+D   K+GD  +A  L++ M +K ++ D V Y+ +I+G+C + +
Sbjct: 677 KG---IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN 733

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           ++ AF+ F +M  +G  P    YN L++  CK+G +++A + +  + + G A   +S+ T
Sbjct: 734 VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNT 792

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G C    I +A +    M+ K ++P+   +  +ID + + G +  A  +   M    
Sbjct: 793 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERN 852

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  +  T+ +L+    + G   + F+L ++M+  G+ PD  TY L+I A C   ++  A 
Sbjct: 853 LIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAF 912

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +L DE++ +G+      +  LI   C R ++ EA ++  ++  LGL         L + +
Sbjct: 913 KLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSF 972

Query: 552 RRMKESDKARDIHQ 565
               + D+A  + +
Sbjct: 973 HEAGKMDEATRVFE 986



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 177/401 (44%), Gaps = 36/401 (8%)

Query: 94   LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
            ++E L     +++ G V      D   + ++I   C  G++  A  L  +M  KG  P++
Sbjct: 629  VQEALKVFSELKEKGLV-----PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 683

Query: 154  LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
              +N LV+ LCK GD+++A  +   M E    P+  TY+  I GYC+   + +A  LF  
Sbjct: 684  FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 743

Query: 214  MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD-----------DGKATS--- 259
            M + G++P+   +N LVH  CK+G +  A+    E+L              DG   S   
Sbjct: 744  MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKI 803

Query: 260  -----------------DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                             D +T T ++D + K G   +A  L+ +M ++N+  D V Y  L
Sbjct: 804  QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 863

Query: 303  INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            + G+   G  S  FA F +M+ +G  PD +TY  ++   CK+  L EA      +   G+
Sbjct: 864  MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 923

Query: 363  APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
                  +  +I  LC   D+ +A + L  M E  + P     N ++  +   G +  A  
Sbjct: 924  LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATR 983

Query: 423  IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
            + + + S G+  +  T   L+          DA +L K+++
Sbjct: 984  VFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 172/366 (46%), Gaps = 7/366 (1%)

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
           T Y   + LD  L  F      G  P  V  +IL+ +  + G+L +A       +A +D 
Sbjct: 135 TPYSSSSILDSVLFWFRNYG--GSSP--VVFDILIDSYKRMGMLDEAANVF--FVAKNDS 188

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
              S +  +++L D   K G       ++N M    +  D+  Y  L+   C  GD+  A
Sbjct: 189 ILISLIRCNSLLKD-LLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGA 247

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                +M ++G  P+   Y+ ++  +C+ G +DEA      + + G+ P+  +Y  I  G
Sbjct: 248 KRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAG 307

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           LC    + +A+     M +  + P+ +  + +IDG+ R GD+     I+D+M+S G+  N
Sbjct: 308 LCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPIN 367

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           + T+N LI    + G +  A  + K M+  G  P+  T+ LLI   C   ++  AL+L D
Sbjct: 368 LITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLD 427

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
           EM +R + P  ++Y  +I G C   ++  A ++  K+   GL  + + + IL   Y    
Sbjct: 428 EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEG 487

Query: 556 ESDKAR 561
             ++AR
Sbjct: 488 RIEEAR 493



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 127/275 (46%)

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V +++LI+ +   G +  A   F        L  +I  N+LL  L K G ++     Y  
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +    +  D  +Y  ++  LC  GD+  A+  L+ M EK + P   I++++I+G  + GD
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A  ++  M   G+  N +T+  +     R   + +A    +EM   G+ PD    + 
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI      G I   L++ D M+  GI  ++ITY  LI G C  G M++A E+   + TLG
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
              +   F +L + Y R     +A ++  +   RN
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 433


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 217/412 (52%), Gaps = 3/412 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  L L  K   A+ L  +M+Q+G  P+++T+  +VN LCK GD++ A +++ +M   
Sbjct: 119 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 178

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +   +   +N  I   C+   +D AL+LF  M   GIRPN VT++ L+  LC  G   DA
Sbjct: 179 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 238

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +++   + K   +++T   L+D++ K G   +A  L +DM +++I  DI  YN L
Sbjct: 239 SQLLSDMI---EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 295

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           INGFC++  +  A   F  M+ +   PD+ TYNTL+   CK  ++++ +  +  +S  G+
Sbjct: 296 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 355

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D ++Y T+IQGL   GD   A++    M+   V P+   +++++DG    G L  A  
Sbjct: 356 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 415

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M    +  +++ +  +I    + G + D + L   + L G+ P+V TYN +I   C
Sbjct: 416 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 475

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           +   +  A  L  +M   G  PD  TY  LI+ H   G+   + E+  ++++
Sbjct: 476 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 527



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 219/433 (50%), Gaps = 16/433 (3%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           +L L  KM++ G  P ++T + L+N  C    +  A  ++ +M EM   P+  T+   I 
Sbjct: 63  SLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 122

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G    N+  +A+ L   M   G +PN VT+ ++V+ LCK+G +  A   L ++ A    K
Sbjct: 123 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA---AK 179

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
             +DV+    ++DS  K      AL L+ +M  K I+ ++V Y+ LI+  C  G  S A 
Sbjct: 180 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 239

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
                M+++   P+++T+N L++   K+GK  EA   +  + K  + PD  +Y ++I G 
Sbjct: 240 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 299

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C+H  + KA++    M+ K   P+   +N +I G+ +   + +   +   M   G+  + 
Sbjct: 300 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 359

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+  LI      G   +A  + K+M+ DG+ PD+ TY++L+   CN G +  AL+++D 
Sbjct: 360 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 419

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF----------RI 546
           M +  I  DI  YT +I+G C  G + +  ++F  +   G+  + + +          R+
Sbjct: 420 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 479

Query: 547 LKKRY---RRMKE 556
           L++ Y   ++MKE
Sbjct: 480 LQEAYALLKKMKE 492



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 188/402 (46%), Gaps = 40/402 (9%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK--ALHLFSTMANNGIRPNRVTH 226
           L+ A  +   M + RP P+   +N  ++   ++ + D   +L L   M   G  P+ VT 
Sbjct: 23  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTL 82

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           + L++  C    + DAV  + +++   +     D IT T L+   F +    +A+AL + 
Sbjct: 83  SSLLNGYCHGKRISDAVALVDQMV---EMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 139

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M Q+  Q ++V Y V++NG C  GDI  AF    +M       DV+ +NT+++ LCK   
Sbjct: 140 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 199

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           +D+A + +  +   G+ P+ ++Y ++I  LC +G    A + L  M+EK + P       
Sbjct: 200 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP------- 252

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
                                       N+ TFNALI A  + G   +A  L  +M+   
Sbjct: 253 ----------------------------NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 284

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           I PD+FTYN LI   C    +  A Q+++ M+ +   PD+ TY  LIKG C    +++  
Sbjct: 285 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 344

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           E+F ++   GL  D + +  L +      + D A+ + ++ +
Sbjct: 345 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 386



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 164/349 (46%), Gaps = 3/349 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D      +I  LC    +  AL L ++M  KG  P+V+T++ L++ LC  G    A 
Sbjct: 180 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 239

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M E + +PN  T+NA I  + +  +  +A  L   M    I P+  T+N L++  
Sbjct: 240 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 299

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C    L D  K + E +   D     D+ T   L+  + K+        L+ +M  + + 
Sbjct: 300 CMHDRL-DKAKQMFEFMVSKD--CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 356

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D V Y  LI G   +GD  +A   F QM+  G  PD++TY+ LL+ LC  GKL++A   
Sbjct: 357 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 416

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  + K+ +  D   Y T+I+G+C  G +    +   S+  K V P    +N +I G   
Sbjct: 417 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 476

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
              L  A+++   M   G   +  T+N LI A  R G    +  L +EM
Sbjct: 477 KRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 525



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 138/315 (43%), Gaps = 44/315 (13%)

Query: 82  NPQAV-FNAL-DLILKEN--LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTA 137
           NP  V FNAL D  +KE   ++  K   D   ++ +++ D   + ++I   C+  ++  A
Sbjct: 251 NPNLVTFNALIDAFVKEGKFVEAEKLHDDM--IKRSIDPDIFTYNSLINGFCMHDRLDKA 308

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
             +   M+ K   PD+ T+N L+   CK   +E    + REMS      +  TY   I G
Sbjct: 309 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 368

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
                + D A  +F  M ++G+ P+ +T++IL+  LC                       
Sbjct: 369 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC----------------------- 405

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
                           NG   +AL +++ M +  I+ DI  Y  +I G C  G +   + 
Sbjct: 406 ---------------NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 450

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            FC +  +G  P+V+TYNT+++ LC +  L EA      + + G  PD  +Y T+I+   
Sbjct: 451 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 510

Query: 378 IHGDIVKAREFLLSM 392
             GD   + E +  M
Sbjct: 511 RDGDKAASAELIREM 525



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 2/262 (0%)

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE--ASHFYGVLSKTGVAPDQISY 369
           +  A   F  M+K   LP +  +N LL+ + K  K D   +    G + K G  P  ++ 
Sbjct: 23  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTL 82

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            +++ G C    I  A   +  M+E    P+   +  +I G       S A ++ D M+ 
Sbjct: 83  SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G   N+ T+  ++    + G I  AF+L  +M    I  DV  +N +I + C   H+  
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 202

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           AL L+ EM  +GI P+++TY+ LI   C+ G   +A ++ + +    +  + + F  L  
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 262

Query: 550 RYRRMKESDKARDIHQKWLLRN 571
            + +  +  +A  +H   + R+
Sbjct: 263 AFVKEGKFVEAEKLHDDMIKRS 284



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 39/237 (16%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I+ L   G    A  + ++M+  G  PD++T++ L++ LC  G LEKA 
Sbjct: 355 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 414

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V   M +     +   Y   I G C+  ++D    LF +++  G++PN VT+N ++  L
Sbjct: 415 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 474

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C K LL                                       +A AL   M +    
Sbjct: 475 CSKRLLQ--------------------------------------EAYALLKKMKEDGPL 496

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            D   YN LI     +GD +++     +M    F+ D  T   + N L   G+LD++
Sbjct: 497 PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 552


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 217/412 (52%), Gaps = 3/412 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  L L  K   A+ L  +M+Q+G  P+++T+  +VN LCK GD++ A +++ +M   
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +   +   +N  I   C+   +D AL+LF  M   GIRPN VT++ L+  LC  G   DA
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +++   + K   +++T   L+D++ K G   +A  L +DM +++I  DI  YN L
Sbjct: 240 SQLLSDMI---EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           INGFC++  +  A   F  M+ +   PD+ TYNTL+   CK  ++++ +  +  +S  G+
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D ++Y T+IQGL   GD   A++    M+   V P+   +++++DG    G L  A  
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M    +  +++ +  +I    + G + D + L   + L G+ P+V TYN +I   C
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           +   +  A  L  +M   G  PD  TY  LI+ H   G+   + E+  ++++
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 224/446 (50%), Gaps = 16/446 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C   +I  AL L  KM++ G  P ++T + L+N  C    +  A  ++ +M EM 
Sbjct: 51  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 110

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T+   I G    N+  +A+ L   M   G +PN VT+ ++V+ LCK+G +  A 
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++ A    K  +DV+    ++DS  K      AL L+ +M  K I+ ++V Y+ LI
Sbjct: 171 NLLNKMEA---AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G  S A      M+++   P+++T+N L++   K+GK  EA   +  + K  + 
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y ++I G C+H  + KA++    M+ K   P+   +N +I G+ +   + +   +
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+  +  T+  LI      G   +A  + K+M+ DG+ PD+ TY++L+   CN
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  AL+++D M +  I  DI  YT +I+G C  G + +  ++F  +   G+  + + 
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 467

Query: 544 F----------RILKKRY---RRMKE 556
           +          R+L++ Y   ++MKE
Sbjct: 468 YNTMISGLCSKRLLQEAYALLKKMKE 493



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 204/404 (50%), Gaps = 3/404 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++   +P +   N L++ + K+   +    +  +M  +  S N  TYN  I  +CR ++
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +  AL L   M   G  P+ VT + L++  C    + DAV  + +++   +     D IT
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV---EMGYRPDTIT 117

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            T L+   F +    +A+AL + M Q+  Q ++V Y V++NG C  GDI  AF    +M 
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
                 DV+ +NT+++ LCK   +D+A + +  +   G+ P+ ++Y ++I  LC +G   
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A + L  M+EK + P    +N +ID + + G    A  + D M+   +  ++FT+N+LI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                   +  A  + + M+    FPD+ TYN LI   C    +    +L+ EM  RG+ 
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            D +TYT LI+G    G+   A++VF ++ + G+  D + + IL
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 164/349 (46%), Gaps = 3/349 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D      +I  LC    +  AL L ++M  KG  P+V+T++ L++ LC  G    A 
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M E + +PN  T+NA I  + +  +  +A  L   M    I P+  T+N L++  
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C    L D  K + E +   D     D+ T   L+  + K+        L+ +M  + + 
Sbjct: 301 CMHDRL-DKAKQMFEFMVSKD--CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D V Y  LI G   +GD  +A   F QM+  G  PD++TY+ LL+ LC  GKL++A   
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  + K+ +  D   Y T+I+G+C  G +    +   S+  K V P    +N +I G   
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
              L  A+++   M   G   +  T+N LI A  R G    +  L +EM
Sbjct: 478 KRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 138/315 (43%), Gaps = 44/315 (13%)

Query: 82  NPQAV-FNAL-DLILKEN--LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTA 137
           NP  V FNAL D  +KE   ++  K   D   ++ +++ D   + ++I   C+  ++  A
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDM--IKRSIDPDIFTYNSLINGFCMHDRLDKA 309

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
             +   M+ K   PD+ T+N L+   CK   +E    + REMS      +  TY   I G
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
                + D A  +F  M ++G+ P+ +T++IL+  LC                       
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC----------------------- 406

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
                           NG   +AL +++ M +  I+ DI  Y  +I G C  G +   + 
Sbjct: 407 ---------------NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            FC +  +G  P+V+TYNT+++ LC +  L EA      + + G  PD  +Y T+I+   
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511

Query: 378 IHGDIVKAREFLLSM 392
             GD   + E +  M
Sbjct: 512 RDGDKAASAELIREM 526



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 119/251 (47%)

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +M + G   ++ TYN L+NC C++ ++  A    G + K G  P  ++  +++ G C   
Sbjct: 35  KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 94

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            I  A   +  M+E    P+   +  +I G       S A ++ D M+  G   N+ T+ 
Sbjct: 95  RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            ++    + G I  AF+L  +M    I  DV  +N +I + C   H+  AL L+ EM  +
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           GI P+++TY+ LI   C+ G   +A ++ + +    +  + + F  L   + +  +  +A
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274

Query: 561 RDIHQKWLLRN 571
             +H   + R+
Sbjct: 275 EKLHDDMIKRS 285



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 39/234 (16%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I+ L   G    A  + ++M+  G  PD++T++ L++ LC  G LEKA  V 
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M +     +   Y   I G C+  ++D    LF +++  G++PN VT+N ++  LC K
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
            LL                                       +A AL   M +     D 
Sbjct: 479 RLLQ--------------------------------------EAYALLKKMKEDGPLPDS 500

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             YN LI     +GD +++     +M    F+ D  T   + N L   G+LD++
Sbjct: 501 GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 553


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 139/438 (31%), Positives = 221/438 (50%), Gaps = 43/438 (9%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D +    VI  LC  G+I  A  L  +M+ +G   D LT+ YL++ LC++G +++A  
Sbjct: 272 EPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARA 331

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL-FSTMANNGIRPNRVTHNILVHAL 233
           ++ ++    P+PN   YN  I+GY      ++A  L ++ M   G  P+  T NI++  L
Sbjct: 332 LLNKI----PNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGL 387

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            KKG L  A++ L E++A    +   +VIT TIL++ + K G   +A  + N M  K + 
Sbjct: 388 VKKGYLVSALELLNEMVAK---RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLS 444

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            + V YN LI   C +G+I  A   F +M  +G  PD+ T+N+L+N LCK  K++EA   
Sbjct: 445 LNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSL 504

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  +   GV  + ++Y T++    +   I                               
Sbjct: 505 YHDMFLEGVIANTVTYNTLVHAFLMRDSI------------------------------- 533

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
                 AF + D ML  G   +  T+N LI A  + G++     L +EML  GIFP + +
Sbjct: 534 ----QQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIIS 589

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            N+LI   C  G ++ AL+   +M+ RG+TPDI+TY  LI G C  G+++EA  +F K+Q
Sbjct: 590 CNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQ 649

Query: 534 TLGLAIDHIPFRILKKRY 551
           + G+  D I +  L  R+
Sbjct: 650 SEGIRPDAITYNTLISRH 667



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 202/423 (47%), Gaps = 16/423 (3%)

Query: 151 PDVLTHNYLVNELCKIGDLEK-ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
           P   ++N +++ L   GD  + A +V  +M     SP   T+   +   C V+E+D A  
Sbjct: 168 PTFKSYNVVLDILVD-GDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACS 226

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL---ADDDGKATSDVITSTI 266
           L   MA +G  PN V +  L+HALC+   + +A++ L ++     + D +  +DVI    
Sbjct: 227 LLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLC 286

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
                 + G   +A  L + M  +   TD + Y  L++G C  G +  A A    +L + 
Sbjct: 287 ------RAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARA----LLNKI 336

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHF-YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
             P+ + YNTL++     G+ +EA    Y  +   G  PD  ++  +I GL   G +V A
Sbjct: 337 PNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSA 396

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E L  M+ K   P    + ++I+G+ + G L  A  I + M + G+S N   +N LI A
Sbjct: 397 LELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICA 456

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G+I +A  L  EM   G  PD++T+N LI   C    +  AL LY +M   G+  +
Sbjct: 457 LCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIAN 516

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            +TY  L+     R ++++A ++  ++   G  +D+I +  L K   +    +K   + +
Sbjct: 517 TVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFE 576

Query: 566 KWL 568
           + L
Sbjct: 577 EML 579



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 162/320 (50%), Gaps = 4/320 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            E +   +  +I   C  G++  A  +   M  KG   + + +N L+  LCK G++E+A 
Sbjct: 408 FEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEAL 467

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EMS     P+  T+N+ I G C+ +++++AL L+  M   G+  N VT+N LVHA 
Sbjct: 468 QLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAF 527

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
             +  +  A K + E+L         D IT   L+ +  K G   + L L+ +M  K I 
Sbjct: 528 LMRDSIQQAFKLVDEMLFRG---CPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIF 584

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             I++ N+LI+G C  G ++ A  +   M+ RG  PD++TYN+L+N LCK G + EAS+ 
Sbjct: 585 PTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNL 644

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  L   G+ PD I+Y T+I   C  G    A   L   ++   +P    W+++I+   +
Sbjct: 645 FNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704

Query: 414 CGDLSNAFSIRDLMLSFGVS 433
                  FS +D  +  GVS
Sbjct: 705 KIPWGARFS-KDFTVECGVS 723


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 226/426 (53%), Gaps = 8/426 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKG--TVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           VI  LC  G +  A  L  +MI+KG  + PD++T+N L+N   +   + +A     +M  
Sbjct: 138 VISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKA 197

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
              +P+  T N  ++G C+  ++++AL +   M   G  P+ +T+N ++HALC  G + +
Sbjct: 198 AGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVE 257

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A + L  +        + D++T   L+D + K G   +AL +  +M ++NI  D++ Y +
Sbjct: 258 AAEILKTM------SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTI 311

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L+NG C  G +  AF    +++++G++PDVI Y +L++ LCK G+++EA      +S  G
Sbjct: 312 LVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRG 371

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
                + Y +++ G C  G++ KARE L  M+  ++VP    +N+++ G  + G +S A 
Sbjct: 372 CRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAV 431

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           S+   +++ G   +V T+N LI    +   + +A  L  EM   G FP+  T   ++   
Sbjct: 432 SLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGL 491

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C +G +  A  L  EM R+   P+++ YT LI G C    M +A  V   ++  G+A+D 
Sbjct: 492 CRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDD 551

Query: 542 IPFRIL 547
             +R L
Sbjct: 552 FAYRKL 557



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 209/406 (51%), Gaps = 4/406 (0%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           + ++  G  P+++T   L+   CK G   +A   +R + E   +P+   +N  I G  + 
Sbjct: 51  KDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKD 110

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
              D+A+ LF  M ++ ++P  VT+N ++  LCK G L  A + L E++    GK+  D+
Sbjct: 111 GNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIR-KGGKSAPDI 169

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T   L++++++     +A A    M    I  D++  N+L++G C +GD+  A      
Sbjct: 170 VTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDG 229

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M   G +PDVITYN++++ LC  GK+ EA+    +L     +PD +++ T++ G C  G 
Sbjct: 230 MKLAGPVPDVITYNSIIHALCVAGKVVEAAE---ILKTMSCSPDLVTFNTLLDGFCKAGM 286

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + +A E L  M  ++++P+   + ++++G  R G +  AF + + ++  G   +V  + +
Sbjct: 287 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 346

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           L+    + G I +A  L KEM + G    V  Y+ L+   C  G++H A ++  EM+   
Sbjct: 347 LVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSIN 406

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + P + TY  ++ G    G++ +A  + + +   G   D + +  L
Sbjct: 407 MVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTL 452



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 200/404 (49%), Gaps = 8/404 (1%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           Q G   DV ++N+L++ L K G   +   V +++     SPN  T+   I G C+  +  
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAM 79

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +AL     +    + P+    N+L+H L K G    AVK    +   +  +   +++T  
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENM---ESSRVKPEIVTYN 136

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQT--DIVAYNVLINGFCLNGDISSAFAYFCQML 323
            ++    K+G+  +A  L  +M +K  ++  DIV YN LIN F     I  A A+  +M 
Sbjct: 137 TVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMK 196

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  PDV+T N L++ +CK G ++EA      +   G  PD I+Y +II  LC+ G +V
Sbjct: 197 AAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVV 256

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A E L +M   S  P+   +N ++DG+ + G L  A  + + M    +  +V T+  L+
Sbjct: 257 EAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILV 313

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               R G +  AF L +E++  G  PDV  Y  L+   C  G I  A +L  EM  RG  
Sbjct: 314 NGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCR 373

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             ++ Y+ L+ G+C  GN+ +A E+ A++ ++ +      + I+
Sbjct: 374 TGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIV 417



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 183/356 (51%), Gaps = 8/356 (2%)

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           ++  + ++G  PN VT  IL+   CK G    A++FL    A D+     DV    +L+ 
Sbjct: 49  VYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFL---RALDEFSVAPDVYIFNVLIH 105

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG--F 327
             FK+G+  QA+ L+ +M    ++ +IV YN +I+G C +G++  A     +M+++G   
Sbjct: 106 GLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKS 165

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PD++TYNTL+N   +  ++ EA  F   +   G+ PD ++   ++ G+C  GD+ +A E
Sbjct: 166 APDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALE 225

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L  M     VP+   +N II      G +  A  I   M     S ++ TFN L+    
Sbjct: 226 ILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFC 282

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G +  A  + +EM  + I PDV TY +L+   C +G + +A  L +E++R+G  PD+I
Sbjct: 283 KAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI 342

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            YT L+ G C  G ++EA ++  ++   G     + +  L   Y R     KAR+I
Sbjct: 343 AYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREI 398



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 196/388 (50%), Gaps = 11/388 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E L+ L  M+  GPV      D   + ++I  LC+ GK+  A  + + M      PD+
Sbjct: 220 VEEALEILDGMKLAGPV-----PDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDL 271

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T N L++  CK G L +A  V+ EM      P+  TY   + G CRV ++  A +L   
Sbjct: 272 VTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEE 331

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           +   G  P+ + +  LV  LCK G + +A K + E+     G  T  V+ S+ L+  Y +
Sbjct: 332 IVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVR--GCRTGVVMYSS-LVSGYCR 388

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G+  +A  +  +M   N+   +  YN+++ G   +G IS A +    ++ RG++PDV+T
Sbjct: 389 AGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVT 448

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YNTL++ LCK  ++ EA      ++  G  P+ ++  +++ GLC  G +  A   ++ M 
Sbjct: 449 YNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMS 508

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            K   P   ++  +IDG  +   + +A  + D M   GV+ + F +  LI++ + GG + 
Sbjct: 509 RKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVA 568

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           +A ++  EM+  G  PD  T   L  A+
Sbjct: 569 EAMAMYDEMVARGFLPDGSTSKTLEEAA 596



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 199/417 (47%), Gaps = 6/417 (1%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           +I  A   R KM   G  PDVLT N LV+ +CK GD+E+A  ++  M    P P+  TYN
Sbjct: 184 RIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYN 243

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
           + I   C   ++ +A  +  TM+ +   P+ VT N L+   CK G+L  A++ L E+  +
Sbjct: 244 SIIHALCVAGKVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 300

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
           +      DVIT TIL++   + G    A  L  ++ ++    D++AY  L++G C +G+I
Sbjct: 301 N---ILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEI 357

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A     +M  RG    V+ Y++L++  C+ G + +A      +    + P   +Y  +
Sbjct: 358 EEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIV 417

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           + GL   G I KA   +  ++ +  VP+   +N +IDG  +   +  A  + D M S G 
Sbjct: 418 LGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGC 477

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             N  T  +++    R G + DA+SL  EM      P+V  Y  LI   C    +  A  
Sbjct: 478 FPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACM 537

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           + D M  +G+  D   Y +LI      G + EA  ++ ++   G   D    + L++
Sbjct: 538 VLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEE 594



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 157/345 (45%), Gaps = 34/345 (9%)

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DV +   L+D   K+G  F+   ++ D+       ++V + +LI G C  G    A  + 
Sbjct: 26  DVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFL 85

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             + +    PDV  +N L++ L K G  D+A   +  +  + V P+ ++Y T+I GLC  
Sbjct: 86  RALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKS 145

Query: 380 GDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
           G++ KARE L  M+ K     P I  +N +I+ + R   +  A + R+ M + G++ +V 
Sbjct: 146 GNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVL 205

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA----------------- 480
           T N L+    + G + +A  +   M L G  PDV TYN +I A                 
Sbjct: 206 TCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM 265

Query: 481 ---------------SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
                           C  G +  AL++ +EM R  I PD+ITYT L+ G C  G ++ A
Sbjct: 266 SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVA 325

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
             +  +I   G   D I +  L     +  E ++A  + ++  +R
Sbjct: 326 FYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVR 370


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 221/438 (50%), Gaps = 6/438 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           +R L   G++         M+ +G +PD++    L+   C+IG  +KA  V+  + +   
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+  TYN  I+GYC+  E+D AL +   M    + P+ VT+N ++  LC  G L  A++
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L   L  +      DVIT TIL+++  K     QA+ L ++M  K  + D+V YNVLIN
Sbjct: 238 VLDRQLQKE---CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLIN 294

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G +  A  +   M   G  P+VIT+N +L  +C  G+  +A      + + G +P
Sbjct: 295 GICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 354

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
             +++  +I  LC  G + +A + L  M      P    +N ++ G+ +   +  A    
Sbjct: 355 SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 414

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           D+M+S G   ++ T+N L+ A  + G +  A  +  ++   G  P + TYN +I     +
Sbjct: 415 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV 474

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G    A++L DEM R+G+ PDIITY+ L+ G    G + EA + F  ++ LG+  + I +
Sbjct: 475 GKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITY 534

Query: 545 RILKKRYRRMKESDKARD 562
             +     + +++D+A D
Sbjct: 535 NSIMLGLCKSRQTDRAID 552



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 210/449 (46%), Gaps = 35/449 (7%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS- 180
            ++IR  C  GK   A W+   + Q G VPDV+T+N L++  CK G+++ A  V+  M+ 
Sbjct: 153 TSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNV 212

Query: 181 -------------------------------EMRPSPNCATYNAFITGYCRVNELDKALH 209
                                          +    P+  TY   I   C+ + + +A+ 
Sbjct: 213 APDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMK 272

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L   M N G +P+ VT+N+L++ +CK+G L +A+KFL  + +        +VIT  I++ 
Sbjct: 273 LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG---CQPNVITHNIILR 329

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
           S    G    A  L +DM +K     +V +N+LIN  C  G +  A     +M   G  P
Sbjct: 330 SMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTP 389

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           + ++YN LL+  CK+ K+D A  +  ++   G  PD ++Y T++  LC  G +  A E L
Sbjct: 390 NSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 449

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             +  K   P    +N +IDG  + G    A  + D M   G+  ++ T+++L+   +R 
Sbjct: 450 NQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSRE 509

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + +A     ++   GI P+  TYN ++   C       A+     M+ +   P   TY
Sbjct: 510 GKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATY 569

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLA 538
           T LI+G    G  KEA ++  ++ + GL 
Sbjct: 570 TILIEGIAYEGLAKEALDLLNELCSRGLV 598



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 189/392 (48%), Gaps = 3/392 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  +  D   +  ++R LC  GK+  A+ +  + +QK   PDV+T+  L+   CK   + 
Sbjct: 209 RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVG 268

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  ++ EM      P+  TYN  I G C+   LD+A+   + M + G +PN +THNI++
Sbjct: 269 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 328

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
            ++C  G   DA K L ++L       +  V+T  IL++   + G   +A+ +   M   
Sbjct: 329 RSMCSTGRWMDAEKLLSDMLRKG---CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH 385

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
               + ++YN L++GFC    +  A  Y   M+ RG  PD++TYNTLL  LCK GK+D A
Sbjct: 386 GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 445

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                 LS  G +P  I+Y T+I GL   G   +A + L  M  K + P+   ++ ++ G
Sbjct: 446 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSG 505

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             R G +  A      +   G+  N  T+N+++L   +      A      M+     P 
Sbjct: 506 LSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPT 565

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
             TY +LI      G    AL L +E+  RG+
Sbjct: 566 EATYTILIEGIAYEGLAKEALDLLNELCSRGL 597



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 149/289 (51%), Gaps = 5/289 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  ++R +C  G+   A  L   M++KG  P V+T N L+N LC+ G L +A  ++ +M 
Sbjct: 324 HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMP 383

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               +PN  +YN  + G+C+  ++D+A+     M + G  P+ VT+N L+ ALCK G + 
Sbjct: 384 MHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 443

Query: 241 DAVKFLGEVLADDDGKATSDV-ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            AV+ L ++      K  S V IT   ++D   K G   +A+ L ++M +K ++ DI+ Y
Sbjct: 444 VAVEILNQL----SSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITY 499

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           + L++G    G +  A  +F  +   G  P+ ITYN+++  LCK  + D A  F   +  
Sbjct: 500 SSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMIS 559

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
               P + +Y  +I+G+   G   +A + L  +  + +V +     V +
Sbjct: 560 KRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAV 608



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 3/258 (1%)

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           NG++   F +   M+ RG +PD+I   +L+   C+ GK  +A+    +L ++G  PD I+
Sbjct: 127 NGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVIT 186

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I G C  G+I  A + L  M   +V P+   +N I+      G L  A  + D  L
Sbjct: 187 YNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQL 243

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
                 +V T+  LI A  +   +  A  L  EM   G  PDV TYN+LI   C  G + 
Sbjct: 244 QKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD 303

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A++  + M   G  P++IT+  +++  C+ G   +AE++ + +   G +   + F IL 
Sbjct: 304 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 363

Query: 549 KRYRRMKESDKARDIHQK 566
               R     +A DI +K
Sbjct: 364 NFLCRQGLLGRAIDILEK 381


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 130/413 (31%), Positives = 221/413 (53%), Gaps = 5/413 (1%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           TA+ L  ++  KG  P ++T N LVN  C +G++  A  +  ++ ++   P   T+N  I
Sbjct: 77  TAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLI 136

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   +L +ALH    +   G   ++V++  L++ LCK G    A++ L ++    +G
Sbjct: 137 NGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKI----EG 192

Query: 256 K-ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           K   +DV+   I+++S  K+     A  L+++M  K I  D+V +N LI GFC+ G +  
Sbjct: 193 KLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKE 252

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           AF  F +M+ +   PDV T++ L++ LCK G +  A +   V+ K GV PD ++Y +++ 
Sbjct: 253 AFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMD 312

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C+  ++ KA+    +M    V P  H +N++I+G G+   +  A S+   M   G++ 
Sbjct: 313 GYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAP 372

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +  T+N+LI    + G I  A+ L  EM  +GI  D+ TYN LI   C   HI  A+ L 
Sbjct: 373 DTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALV 432

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            ++  +GI P + TY  LI G C  G +K A++VF  +   G +++   + I+
Sbjct: 433 KKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIM 485



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 235/442 (53%), Gaps = 3/442 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G++  A  +  K+++ G  P  +T N L+N +C  G L++A H    +  +    + 
Sbjct: 105 CHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQ 164

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            +Y   I G C++ E   AL +   +    +  + V +NI++++LCK   + DA +   E
Sbjct: 165 VSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSE 224

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           ++     + + DV+T   L+  +   G   +A  L+++M  KNI  D+  +++L++  C 
Sbjct: 225 MITK---RISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCK 281

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           +G+I+ A      M+K+G +PDV+TY++L++  C   ++++A H +  +S+ GVAP   S
Sbjct: 282 DGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHS 341

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I GL     + +A      M  K + P+   +N +IDG  + G +S A+ + D M 
Sbjct: 342 YNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMH 401

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           + G+ +++ T+N+LI    +   I  A +L K++   GI P ++TYN+LI   C  G + 
Sbjct: 402 NNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLK 461

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A  ++ ++L +G + +  TY  +I G C  G   EAE + +K++  G+  D + +  + 
Sbjct: 462 NAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETII 521

Query: 549 KRYRRMKESDKARDIHQKWLLR 570
           +   R  E++KA  + ++ ++R
Sbjct: 522 RALFRKDENEKAEKLLREMIIR 543



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 181/313 (57%), Gaps = 2/313 (0%)

Query: 256 KATSDVITSTILMDSYFK--NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
           + T  ++    ++ S  K  N     A++L + +  K I   IV +N+L+N +C  G+++
Sbjct: 52  RPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMT 111

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            AF+ F ++LK G+ P  IT+NTL+N +C  GKL EA HF+  +   G   DQ+SY+T+I
Sbjct: 112 FAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLI 171

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            GLC  G+   A + L  +  K V  +  ++N+II+   +   +S+A+ +   M++  +S
Sbjct: 172 NGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRIS 231

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            +V TFN+LIL     G + +AF L  EM+L  I PDV+T+++L+ A C  G+I  A  +
Sbjct: 232 PDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNM 291

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
              M+++G+ PD++TY+ L+ G+C    + +A+ VF+ +  LG+A     + I+     +
Sbjct: 292 LAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGK 351

Query: 554 MKESDKARDIHQK 566
           +K  D+A  + ++
Sbjct: 352 IKMVDEALSLFKE 364



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 170/346 (49%), Gaps = 38/346 (10%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C+ G++  A  L  +M+ K   PDV T + LV+ LCK G++ +A +++  M + 
Sbjct: 239 SLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQ 298

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY++ + GYC VNE++KA H+FSTM+  G+ P+  ++NI+++ L K       
Sbjct: 299 GVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGK------- 351

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K + E                               AL+L+ +M  K I  D V YN L
Sbjct: 352 IKMVDE-------------------------------ALSLFKEMCCKGIAPDTVTYNSL 380

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C  G IS A+    +M   G   D++TYN+L++ LCK   +D+A      +   G+
Sbjct: 381 IDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGI 440

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P   +Y  +I GLC  G +  A++    +L K        +N++I+G  + G  + A  
Sbjct: 441 QPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEV 500

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           +   M + G+  +  T+  +I A  R      A  L +EM++ G+ 
Sbjct: 501 LLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 109/279 (39%), Gaps = 72/279 (25%)

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           N F +N D+SS    F +ML+    P ++ +N +L  + K       +H+   +S     
Sbjct: 34  NDFDVNNDVSS----FHRMLRMRPTPSIVEFNKILGSIVKANN----NHYTTAIS----- 80

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
              +S++  ++G                     + P    +N++++ Y   G+++ AFSI
Sbjct: 81  ---LSHQLELKG---------------------ITPTIVTFNILVNCYCHLGEMTFAFSI 116

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              +L  G      TFN LI      G + +A      ++  G   D  +Y  LI   C 
Sbjct: 117 FAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCK 176

Query: 484 LGHIHLAL-----------------------------------QLYDEMLRRGITPDIIT 508
           +G    AL                                   QLY EM+ + I+PD++T
Sbjct: 177 IGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVT 236

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +  LI G C  G +KEA  +F ++    +  D   F IL
Sbjct: 237 FNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSIL 275



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 72/137 (52%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   + ++I  LC    I  A+ L +K+  +G  P + T+N L++ LCK G L+ A 
Sbjct: 405 IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQ 464

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V +++     S N  TYN  I G C+    ++A  L S M NNGI P+ VT+  ++ AL
Sbjct: 465 DVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRAL 524

Query: 234 CKKGLLGDAVKFLGEVL 250
            +K     A K L E++
Sbjct: 525 FRKDENEKAEKLLREMI 541


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 220/442 (49%), Gaps = 3/442 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  A  +   M  KG  P + T+N ++N LCK G   +A  ++ EM  +  SP+ 
Sbjct: 164 CREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDT 223

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN  +   CR +   +A  +F  M   G+ P+ V+ + L+    +   L  A+ +  +
Sbjct: 224 TTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRD 283

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +          D +  T+LM  Y +NG+  +AL + ++M ++    D++AYN ++NG C 
Sbjct: 284 M---KKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCK 340

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
              ++ A   F +M++RG LPD  T+ TL++  C+ G + +A   +G +++  + PD ++
Sbjct: 341 EKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVA 400

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y T+I G C  G++ KA E    M+ + + P    + ++I+ Y   G +S AF + D+M+
Sbjct: 401 YNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMI 460

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G+   + T N +I    R G    A      M+  G+ PD  +YN LI       ++ 
Sbjct: 461 EKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMD 520

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A    ++M + G+ PDIITY  ++ G C +G M+EAE V  K+   G+  D   +  L 
Sbjct: 521 KAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALI 580

Query: 549 KRYRRMKESDKARDIHQKWLLR 570
             +      ++A   H + L R
Sbjct: 581 NGHVTQDNLNEAFRFHDEMLQR 602



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 224/425 (52%), Gaps = 5/425 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A  + R++++ G   +V T N +VN LCK G  +     + EM       +  TYN  I 
Sbjct: 102 AWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIG 161

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            YCR   L++A  + ++MA+ G++P+  T+N +++ LCKKG    A   L E+L  + G 
Sbjct: 162 AYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML--NIGL 219

Query: 257 ATSDVITSTILMDSYFKNGDKF-QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           +      +T+L++S  +  D F +A  ++ +M ++ +  D+V+++ LI  F  N  +  A
Sbjct: 220 SPDTTTYNTLLVESCRR--DNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQA 277

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
             YF  M K G +PD + Y  L++  C+ G + EA      + + G   D I+Y TI+ G
Sbjct: 278 LVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNG 337

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           LC    +  A +    M+E+  +P+ + +  +I G+ + G+++ A S+   M    +  +
Sbjct: 338 LCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPD 397

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           +  +N LI    + G +  A  L   M+   IFP+  TY +LI A C++GH+  A +L+D
Sbjct: 398 IVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWD 457

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
            M+ +GI P ++T   +IKG+C  G+  +A+E   ++   G+A DHI +  L   + R  
Sbjct: 458 VMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVRED 517

Query: 556 ESDKA 560
             DKA
Sbjct: 518 NMDKA 522



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 225/450 (50%), Gaps = 8/450 (1%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +L+E  + + +M D G     L+     + A+I  LC  G+   A  +  +M+  G  PD
Sbjct: 168 LLEEAFEIMNSMADKG-----LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPD 222

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
             T+N L+ E C+  +  +A  +  EM      P+  ++++ I  + R   LD+AL  F 
Sbjct: 223 TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFR 282

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M   G+ P+ V + +L+H  C+ G + +A+K   E+L   +     DVI    +++   
Sbjct: 283 DMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEML---EQGCVLDVIAYNTILNGLC 339

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K      A  L+++M ++    D   +  LI+G C +G+++ A + F  M +R   PD++
Sbjct: 340 KEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIV 399

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            YNTL++  CK G++++AS  +  +    + P+ I+Y  +I   C  G + +A      M
Sbjct: 400 AYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM 459

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +EK + P     N +I GY R GD S A      M++ GV+ +  ++N LI    R  ++
Sbjct: 460 IEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNM 519

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             AF    +M  +G+ PD+ TYN+++   C  G +  A  +  +M+ +GI PD  TYT L
Sbjct: 520 DKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTAL 579

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           I GH  + N+ EA     ++   G A D +
Sbjct: 580 INGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 184/360 (51%), Gaps = 3/360 (0%)

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N+ + G  +++ ++ A  +   +  +GI  N  T NI+V+ALCK G   D   FL E+  
Sbjct: 87  NSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEM-- 144

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            +     +D++T   L+ +Y + G   +A  + N M  K ++  +  YN +ING C  G 
Sbjct: 145 -EGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGR 203

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
            + A     +ML  G  PD  TYNTLL   C++    EA   +G + + GV PD +S+ +
Sbjct: 204 YARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSS 263

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I     +  + +A  +   M +  +VP+  I+ V++ GY R G++  A  IRD ML  G
Sbjct: 264 LIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG 323

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              +V  +N ++    +   + DA  L  EM+  G  PD +T+  LI   C  G++  AL
Sbjct: 324 CVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 383

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            L+  M +R I PDI+ Y  LI G C  G M++A E++  + +  +  +HI + IL   Y
Sbjct: 384 SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 443



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 142/290 (48%)

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           G   ++ +   +L+ +Y +     +    +  +  K     I A N L+ G      +  
Sbjct: 42  GNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVEL 101

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A+    ++++ G   +V T N ++N LCK GK D+   F   +   G+  D ++Y T+I 
Sbjct: 102 AWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIG 161

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
             C  G + +A E + SM +K + P    +N II+G  + G  + A  I   ML+ G+S 
Sbjct: 162 AYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSP 221

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +  T+N L++   R  +  +A  +  EML  G+ PD+ +++ LI       H+  AL  +
Sbjct: 222 DTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYF 281

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            +M + G+ PD + YT L+ G+C  GNM EA ++  ++   G  +D I +
Sbjct: 282 RDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAY 331



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 132/275 (48%), Gaps = 3/275 (1%)

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
           N  T+ + +++LI  +     +      F  +  +G+L  +   N+LL  L K   ++ A
Sbjct: 43  NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELA 102

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +  + ++G+  +  +   ++  LC  G     + FL  M    +  +   +N +I  
Sbjct: 103 WEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGA 162

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           Y R G L  AF I + M   G+  ++FT+NA+I    + G    A  +  EML  G+ PD
Sbjct: 163 YCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPD 222

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             TYN L+  SC   +   A +++ EMLR+G+ PD+++++ LI       ++ +A   F 
Sbjct: 223 TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFR 282

Query: 531 KIQTLGLAIDHIPFRILKKRYRR---MKESDKARD 562
            ++  GL  D++ + +L   Y R   M E+ K RD
Sbjct: 283 DMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRD 317



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 124/267 (46%), Gaps = 17/267 (6%)

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +++ F  +  +S A A   +M++R  +  V     L++ +C  G     +  + +L +T 
Sbjct: 1   MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMC--GNCGTNNLVFDLLIRTY 58

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V   ++   T          I++++ +L+S+         +  N ++ G  +   +  A+
Sbjct: 59  VQARKLREGTEAF------RILRSKGYLVSI---------NACNSLLGGLVKIDWVELAW 103

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   ++  G+  NV+T N ++ A  + G   D  S   EM  +GI+ D+ TYN LIGA 
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C  G +  A ++ + M  +G+ P + TY  +I G C +G    A+ +  ++  +GL+ D 
Sbjct: 164 CREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDT 223

Query: 542 IPFRILKKRYRRMKESDKARDIHQKWL 568
             +  L     R     +A++I  + L
Sbjct: 224 TTYNTLLVESCRRDNFSEAKEIFGEML 250


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 221/438 (50%), Gaps = 6/438 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           +R L   G++         M+ +G +PD++    L+   C+IG  +KA  V+  + +   
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+  TYN  I+GYC+  E+D AL +   M    + P+ VT+N ++  LC  G L  A++
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L   L  +      DVIT TIL+++  K     QA+ L ++M  K  + D+V YNVLIN
Sbjct: 181 VLDRQLQKE---CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLIN 237

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G +  A  +   M   G  P+VIT+N +L  +C  G+  +A      + + G +P
Sbjct: 238 GICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 297

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
             +++  +I  LC  G + +A + L  M      P    +N ++ G+ +   +  A    
Sbjct: 298 SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 357

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           D+M+S G   ++ T+N L+ A  + G +  A  +  ++   G  P + TYN +I     +
Sbjct: 358 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV 417

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G    A++L DEM R+G+ PDIITY+ L+ G    G + EA + F  ++ LG+  + I +
Sbjct: 418 GKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITY 477

Query: 545 RILKKRYRRMKESDKARD 562
             +     + +++D+A D
Sbjct: 478 NSIMLGLCKSRQTDRAID 495



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 210/448 (46%), Gaps = 35/448 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS-- 180
           ++IR  C  GK   A W+   + Q G VPDV+T+N L++  CK G+++ A  V+  M+  
Sbjct: 97  SLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVA 156

Query: 181 ------------------------------EMRPSPNCATYNAFITGYCRVNELDKALHL 210
                                         +    P+  TY   I   C+ + + +A+ L
Sbjct: 157 PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKL 216

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M N G +P+ VT+N+L++ +CK+G L +A+KFL  + +        +VIT  I++ S
Sbjct: 217 LDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG---CQPNVITHNIILRS 273

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
               G    A  L +DM +K     +V +N+LIN  C  G +  A     +M   G  P+
Sbjct: 274 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 333

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            ++YN LL+  CK+ K+D A  +  ++   G  PD ++Y T++  LC  G +  A E L 
Sbjct: 334 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 393

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            +  K   P    +N +IDG  + G    A  + D M   G+  ++ T+++L+   +R G
Sbjct: 394 QLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG 453

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A     ++   GI P+  TYN ++   C       A+     M+ +   P   TYT
Sbjct: 454 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYT 513

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            LI+G    G  KEA ++  ++ + GL 
Sbjct: 514 ILIEGIAYEGLAKEALDLLNELCSRGLV 541



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 189/392 (48%), Gaps = 3/392 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  +  D   +  ++R LC  GK+  A+ +  + +QK   PDV+T+  L+   CK   + 
Sbjct: 152 RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVG 211

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  ++ EM      P+  TYN  I G C+   LD+A+   + M + G +PN +THNI++
Sbjct: 212 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 271

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
            ++C  G   DA K L ++L       +  V+T  IL++   + G   +A+ +   M   
Sbjct: 272 RSMCSTGRWMDAEKLLSDMLRKG---CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH 328

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
               + ++YN L++GFC    +  A  Y   M+ RG  PD++TYNTLL  LCK GK+D A
Sbjct: 329 GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 388

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                 LS  G +P  I+Y T+I GL   G   +A + L  M  K + P+   ++ ++ G
Sbjct: 389 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSG 448

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             R G +  A      +   G+  N  T+N+++L   +      A      M+     P 
Sbjct: 449 LSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPT 508

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
             TY +LI      G    AL L +E+  RG+
Sbjct: 509 EATYTILIEGIAYEGLAKEALDLLNELCSRGL 540



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 149/289 (51%), Gaps = 5/289 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  ++R +C  G+   A  L   M++KG  P V+T N L+N LC+ G L +A  ++ +M 
Sbjct: 267 HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMP 326

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               +PN  +YN  + G+C+  ++D+A+     M + G  P+ VT+N L+ ALCK G + 
Sbjct: 327 MHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 386

Query: 241 DAVKFLGEVLADDDGKATSDV-ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            AV+ L ++      K  S V IT   ++D   K G   +A+ L ++M +K ++ DI+ Y
Sbjct: 387 VAVEILNQL----SSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITY 442

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           + L++G    G +  A  +F  +   G  P+ ITYN+++  LCK  + D A  F   +  
Sbjct: 443 SSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMIS 502

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
               P + +Y  +I+G+   G   +A + L  +  + +V +     V +
Sbjct: 503 KRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAV 551



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 3/258 (1%)

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           NG++   F +   M+ RG +PD+I   +L+   C+ GK  +A+    +L ++G  PD I+
Sbjct: 70  NGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVIT 129

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I G C  G+I  A + L  M   +V P+   +N I+      G L  A  + D  L
Sbjct: 130 YNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQL 186

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
                 +V T+  LI A  +   +  A  L  EM   G  PDV TYN+LI   C  G + 
Sbjct: 187 QKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD 246

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A++  + M   G  P++IT+  +++  C+ G   +AE++ + +   G +   + F IL 
Sbjct: 247 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 306

Query: 549 KRYRRMKESDKARDIHQK 566
               R     +A DI +K
Sbjct: 307 NFLCRQGLLGRAIDILEK 324


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 224/429 (52%), Gaps = 3/429 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A  L  +M+Q+G  PD+ T+N +VN LCK   ++KA+ ++R+M +    P+  TY
Sbjct: 230 GDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTY 289

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N+ I GY    +  +A+ +   M + GI P+ VT N L+ +LCK G + DA      +  
Sbjct: 290 NSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAM 349

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
              G+ T D+ +  I+++ Y   G       L+N M    I  D   +NVLI  +   G 
Sbjct: 350 K--GQKT-DIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGM 406

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F +M ++G  PDV+TY+T++  LC+ GK+D+A   +  +   GVAP   +Y  
Sbjct: 407 LDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHF 466

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +IQG C HGD++KA++ +L M+ K + P+   +N II+   + G + +A +I D  +S G
Sbjct: 467 LIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIG 526

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  NV  +N L+      G + +A  +   M+  GI P+V  Y  L+   C +G I   L
Sbjct: 527 LHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGL 586

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            L+ E+L +GI P    Y  ++ G    G    A+  F ++   G+A+D   + I+    
Sbjct: 587 SLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGL 646

Query: 552 RRMKESDKA 560
            +   SD+A
Sbjct: 647 FKNSCSDEA 655



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 180/348 (51%), Gaps = 2/348 (0%)

Query: 194 FITGYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
            + G C      +AL  L   M + G  P+  ++ I++ +LC     G A + L  ++A+
Sbjct: 149 LLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELL-RMMAE 207

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                  + +    ++D +FK GD  +A  L+N+M Q+ I  D+  YN ++N  C    +
Sbjct: 208 GGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAM 267

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A A   QM+ +G LPD  TYN+L+      G+  EA      ++  G+ PD ++  ++
Sbjct: 268 DKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSL 327

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           +  LC HG I  AR+   SM  K    +   + ++++GY   G L +   + +LMLS G+
Sbjct: 328 MASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGI 387

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           + +   FN LI A  + G +  A  +  EM   G+ PDV TY+ +I A C +G +  A++
Sbjct: 388 APDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVE 447

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            +++M+ +G+ P I TY  LI+G C  G++ +A+++  ++   G+  D
Sbjct: 448 KFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPD 495



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/415 (23%), Positives = 183/415 (44%), Gaps = 48/415 (11%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G  PD    N L+    K G L++A  +  EM E    P+  TY+  I   CR+ +
Sbjct: 382 MLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGK 441

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A+  F+ M + G+ P+  T++ L+   C  G   D +K    VL   +     D+  
Sbjct: 442 MDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHG---DLLKAKDLVLQMMNKGMRPDIGC 498

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              ++++  K G    A  +++      +  +++ YN L++G+CL G + +A   F  M+
Sbjct: 499 FNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMV 558

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  P+V+ Y TL+N  CK G++DE    +  +   G+ P    Y  I+ GL   G  V
Sbjct: 559 SAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTV 618

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGR--CGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
            A+     M E  +  + + +++++ G  +  C D                         
Sbjct: 619 PAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSD------------------------- 653

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
                       +A  L KE+    +  D+ T N++I     +  +  A  L+  + R G
Sbjct: 654 ------------EAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSG 701

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA------IDHIPFRILKKR 550
           + P ++TY+ ++      G ++EA+++F+ ++  G        ++H+   +L+KR
Sbjct: 702 LVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKR 756



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 121/239 (50%), Gaps = 3/239 (1%)

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA-SHFYGVLSKTGVAPDQISYKTIIQ 374
            A+F Q+LK G   D I  + LL  LC+  +  EA       +   G  PD  SY  +++
Sbjct: 128 LAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLK 187

Query: 375 GLCIHGDIVKAREFLLSMLEKSVV--PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
            LC      +A E L  M E   V  P    +N +IDG+ + GD++ A  + + M+  G+
Sbjct: 188 SLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGI 247

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           S ++ T+N ++ A  +  ++  A ++ ++M+  G+ PD +TYN LI    + G    A++
Sbjct: 248 SPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVR 307

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +  +M  +GI PD++T   L+   C  G +K+A +VF  +   G   D   ++I+   Y
Sbjct: 308 VSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGY 366



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 63/119 (52%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  L   G+   A     +M + G   D  T++ ++  L K    ++A  + +E+  M 
Sbjct: 607 ILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMN 666

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              +  T N  I G  ++  +++A  LF++++ +G+ P+ VT++I++  L K+GL+ +A
Sbjct: 667 VKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEA 725


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 231/475 (48%), Gaps = 38/475 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  L   GK+G A  L  +M Q+G  P+V+T+N +++ LCK   ++KA  ++R+M    
Sbjct: 217 VVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNG 276

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYN  I GY  + +  +A+ +F  M + G+ PN VT +  V  LCK G + +A 
Sbjct: 277 VQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAR 336

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +F   +LA        ++I+ + L+  Y   G       L+N M +  I  +   +N+L+
Sbjct: 337 EFFDSMLAKGH---KLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILV 393

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG+   G +  A   F  M KRG  PDV+TY  +++  C+ G +D+A   +  +   GV 
Sbjct: 394 NGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVE 453

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP------------------------ 399
           P+   Y+ +IQG C HGD+VKA E +  +  K + P                        
Sbjct: 454 PNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRI 513

Query: 400 -----------EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
                      + +I+  +IDGY   G +S AF + D M+S G+  ++ T+  L+    +
Sbjct: 514 FDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCK 573

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G I D   L +E+L  G+ P  FTY +++    + G    A +++ EM+  GI   I T
Sbjct: 574 NGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPT 633

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           Y+ L+ G C     +EA  VF K+  + +  D +   I+  +  + +  ++A  +
Sbjct: 634 YSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGL 688



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 205/445 (46%), Gaps = 41/445 (9%)

Query: 123 AVIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR-EMS 180
           +++R LC   +   A+  L  +M + G VPD ++++ ++  +C  G  + A  ++R  + 
Sbjct: 143 SLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVK 202

Query: 181 EMRPSP-NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
           +    P N   Y+  + G  +  ++ +A  LF  M   G+ PN VT+N ++HALCK    
Sbjct: 203 QGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKA--- 259

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
                                            +  DK Q +     M    +Q D V Y
Sbjct: 260 ---------------------------------RAVDKAQGI--LRQMVGNGVQPDNVTY 284

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N LI+G+   G    A   F +M  RG +P+ +T +T +  LCK G+++EA  F+  +  
Sbjct: 285 NTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLA 344

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G   + ISY T++ G    G +V        M+   +VP  H++N++++GY +CG +  
Sbjct: 345 KGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVRE 404

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  I + M   G++ +V T+ A+I A  R GS+ DA      M+  G+ P+   Y  LI 
Sbjct: 405 AMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQ 464

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C  G +  A +L  E+  +G+ P I+++  LI   C  G + EA+ +F  I   G   
Sbjct: 465 GFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKA 524

Query: 540 DHIPFRILKKRYRRMKESDKARDIH 564
           D   F  L   Y  + +  +A  +H
Sbjct: 525 DVNIFTSLIDGYCLIGKMSEAFRVH 549



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 179/384 (46%), Gaps = 8/384 (2%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++ G VP+    N LVN   K G + +A  +  +M +   +P+  TY A I  +CR+  
Sbjct: 377 MVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGS 436

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A+  F+ M + G+ PN   +  L+   C  G L  A + + E+     G     +++
Sbjct: 437 MDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPC---ILS 493

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              L++   K G  F+A  +++ + +   + D+  +  LI+G+CL G +S AF     M+
Sbjct: 494 FASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMV 553

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  PD++TY TL+N  CK G++D+    +  L   GV P   +Y  I+ GL   G   
Sbjct: 554 SVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTA 613

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A+E    M+E  +      +++++ G  R      A ++   + +  V  ++   N +I
Sbjct: 614 AAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMI 673

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               +     +A  L   +   G+ P V TY +++      G +  A  ++  ML+ G++
Sbjct: 674 SKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLS 733

Query: 504 P-----DIITYTELIKGHCARGNM 522
           P     ++I  T L KG   +  +
Sbjct: 734 PTSHFINVIVRTLLEKGEIVKAGI 757



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 145/327 (44%), Gaps = 8/327 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + + +D+   M D G     +E ++  +  +I+  C  G +  A  L  ++  KG  P +
Sbjct: 437 MDDAMDKFNHMIDKG-----VEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCI 491

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           L+   L+N LCK G + +A  +   +       +   + + I GYC + ++ +A  +   
Sbjct: 492 LSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDA 551

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M + GI P+ VT+  LV+  CK G + D +    E+L       T    T  I++D  F 
Sbjct: 552 MVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTT---FTYGIILDGLFH 608

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G    A  ++ +M +  I   I  Y++L+ G C N     A   F ++       D++ 
Sbjct: 609 AGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVI 668

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
            N +++ + K  + +EA   +  +   G+ P   +Y  +++ L   G + +A      ML
Sbjct: 669 LNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVML 728

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           +  + P  H  NVI+      G++  A
Sbjct: 729 KSGLSPTSHFINVIVRTLLEKGEIVKA 755



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 112/258 (43%), Gaps = 10/258 (3%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   +E D   +  ++   C  G+I   L L R+++ KG  P   T+  +++ L   G  
Sbjct: 553 VSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRT 612

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A  + +EM E   +    TY+  +TG CR N  ++A+ +F  +    ++ + V  NI+
Sbjct: 613 AAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIM 672

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  + K     +A      +    D      V T TI+M++  K G   +A  +++ M +
Sbjct: 673 ISKMFKARRREEAEGLFASI---PDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLK 729

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK--- 346
             +       NV++      G+I  A  Y C++  +  L +  T + LL+    +GK   
Sbjct: 730 SGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHRE 789

Query: 347 ----LDEASHFYGVLSKT 360
               L     F+G  SK+
Sbjct: 790 HLNLLPAKYQFFGGGSKS 807


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 229/473 (48%), Gaps = 4/473 (0%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
            D+  T+      RC    D   H  +I      G +  A+ L   M  KG  P ++T N
Sbjct: 173 FDKADTVISEMEKRCVF-PDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFN 231

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            ++  LCK    +KA  V R M +   +P+  ++N  I G+CRV E+++A+  +  M   
Sbjct: 232 SVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQR 291

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G+ P+ V+ + L+     +G +  A  +L E+          D +  T+++  + + G  
Sbjct: 292 GVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG---LVPDGVIYTMVIGGFCRAGSM 348

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +AL + ++M       D+V YN L+NG C    +  A     +M +RG  PD+ T+ TL
Sbjct: 349 SEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTL 408

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           ++  C+ G  ++A   +  L    + PD ++Y ++I G+C  GD+ KA E    M  + +
Sbjct: 409 IHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREI 468

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P    ++++ID +   G +  AF   D M+S G   N+ T+N++I    R G++     
Sbjct: 469 FPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQ 528

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
             ++M+ D I PD+ T+N LI       ++H A  +++ M +  + PD +TY  +I G  
Sbjct: 529 FLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFS 588

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            +GNM+EA  VF K+   G+  D   +  L   +     S +A  +H + + R
Sbjct: 589 EQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHR 641



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 218/395 (55%), Gaps = 3/395 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           +C++  D R    +I   C  G++  A+   ++M Q+G  PDV++ + L+      G ++
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMD 314

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A   +REM  +   P+   Y   I G+CR   + +AL +   M   G  P+ VT+N L+
Sbjct: 315 HAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLL 374

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           + LCK+  L DA + L E+    +   T D+ T T L+  Y ++G+  +AL L++ +  +
Sbjct: 375 NGLCKQHRLLDAEELLNEM---KERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQ 431

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            ++ D+VAYN LI+G C  GD++ A   +  M  R   P+ +TY+ L++  C++G+++EA
Sbjct: 432 RLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEA 491

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
             F   +   G  P+ ++Y +II+G C  G++ K ++FL  M++ +++P+   +N +I G
Sbjct: 492 FGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHG 551

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           Y +  ++  AF++ ++M    V  +  T+N +I   +  G++ +A  + K+M   GI PD
Sbjct: 552 YIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPD 611

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
            +TY  LI      G+   A QL+DEM+ RG  PD
Sbjct: 612 RYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 200/400 (50%), Gaps = 3/400 (0%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           +  T N +V+  CK  + +KAD VI EM +    P+  T+N  I    R  ++D A+ L 
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
            +MAN G++P  VT N ++  LCK      A +      A D      DV +  IL+  +
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVF---RAMDQCSVAPDVRSFNILIGGF 272

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            + G+  +A+  + +M Q+ +  D+V+++ LI  F   G +  A AY  +M   G +PD 
Sbjct: 273 CRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDG 332

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           + Y  ++   C+ G + EA      +   G  PD ++Y T++ GLC    ++ A E L  
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNE 392

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M E+ V P+   +  +I GY R G+   A  + D +L   +  +V  +N+LI    R G 
Sbjct: 393 MKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGD 452

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           +  A  L  +M    IFP+  TY++LI + C  G +  A    DEM+ +G  P+I+TY  
Sbjct: 453 LAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNS 512

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +IKG+C  GN+K+ ++   K+    +  D I F  L   Y
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGY 552



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 193/392 (49%), Gaps = 7/392 (1%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P+P    ++  I  Y +  +  +A   F  + ++ +       N L+ AL + G    A 
Sbjct: 83  PTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAE 142

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +    VL+ D   +  +  T  I++ SY K+ +  +A  + ++M ++ +  D+V +NVLI
Sbjct: 143 EAYRLVLSSD---SEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLI 199

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +     GD+ +A A    M  +G  P ++T+N++L  LCK  + D+A   +  + +  VA
Sbjct: 200 DARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVA 259

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  S+  +I G C  G++ +A +F   M ++ V P+   ++ +I  +   G + +A + 
Sbjct: 260 PDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAY 319

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+  +   +  +I    R GS+ +A  ++ EM+  G  PDV TYN L+   C 
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCK 379

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              +  A +L +EM  RG+TPD+ T+T LI G+C  GN ++A ++F  +    L  D + 
Sbjct: 380 QHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVA 439

Query: 544 FRILKKRYRRMKESDKAR----DIHQKWLLRN 571
           +  L     R  +  KA     D+H + +  N
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREIFPN 471



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 35/220 (15%)

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV------------- 432
           RE + S+L  S  P+P +++++I  Y +      AF    L+L   V             
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAA 131

Query: 433 ----------------------SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
                                   N +T N ++ +  +      A ++  EM    +FPD
Sbjct: 132 LSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPD 191

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V T+N+LI A    G +  A+ L D M  +G+ P I+T+  ++KG C      +A+EVF 
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFR 251

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            +    +A D   F IL   + R+ E ++A   +++   R
Sbjct: 252 AMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQR 291


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 229/447 (51%), Gaps = 5/447 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   ++G  + L  +++++G  PDV+T+N L++ LCK GDLE+A  +   MS   
Sbjct: 87  IINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRG 146

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNG--IRPNRVTHNILVHALCKKGLLGD 241
             PN  TY+  I G C+V  +D+A  L   M      + PN +T+N  +  LCK+ +  +
Sbjct: 147 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 206

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A + +   L D   + + D +T + L+D   K G   +A    +DM       ++V YN 
Sbjct: 207 ACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNA 263

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L+NG C    +  A A    M+ +G  PDVITY+ L++  CK  ++DEA      ++  G
Sbjct: 264 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 323

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             P+ +++ +II GLC      +A +  L +  + +VP+   +N++I G  + G+   A 
Sbjct: 324 CTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQAS 383

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           ++ + M++  +  +V TF ALI    + G +  A  +   M   G+ P+V TYN+L+   
Sbjct: 384 ALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGL 443

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C  G I    +  +EM+  G  P+ +TY  L+   C      +A ++ +K+++ G   D 
Sbjct: 444 CKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDT 503

Query: 542 IPFRILKKRYRRMKESDKARDIHQKWL 568
           + + IL     +  ++++A  + ++ +
Sbjct: 504 VTYNILVDGLWKSGKTEQAITVLEEMV 530



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 201/419 (47%), Gaps = 45/419 (10%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E  + ++++RD G +R  +  D      +I  LC  G+   A      MI  G VP+V+T
Sbjct: 206 EACELMRSLRD-GSLR--VSPDTVTFSTLIDGLCKCGQTDEAC--NDDMIAGGYVPNVVT 260

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +N LVN LCK   +E+A  +I  M +   +P+  TY+  +  +C+ + +D+AL L   MA
Sbjct: 261 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 320

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           + G  PN VT N ++  LCK                       SD            ++G
Sbjct: 321 SRGCTPNVVTFNSIIDGLCK-----------------------SD------------RSG 345

Query: 276 DKFQ-ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           + FQ AL ++N M    +  D V +N+LI G C  G+   A A F +M+ +   PDV+T+
Sbjct: 346 EAFQIALQVYNRM----LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTF 401

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
             L++ LCK G+++ A     ++   GV P+ ++Y  ++ GLC  G I +  EFL  M+ 
Sbjct: 402 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVS 461

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
              VPE   +  ++    R     +A  +   + SFG   +  T+N L+    + G    
Sbjct: 462 SGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQ 521

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           A ++ +EM+  G  PD FT+    G     G++   ++L   +L +G+ PD  T + ++
Sbjct: 522 AITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 168/346 (48%), Gaps = 42/346 (12%)

Query: 266 ILMDSYFKNGDKFQALALW-NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           I++ S  + G+  +AL ++  +M +  +   IV YN +ING C + ++ +    F +++K
Sbjct: 50  IVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVK 109

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           RG  PDV+TYNTL++ LCK G L+EA   +G +S  G  P+ ++Y  +I GLC  G I +
Sbjct: 110 RGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDE 169

Query: 385 AREFLLSMLEKS---------------------------------------VVPEPHIWN 405
           ARE +  M  KS                                       V P+   ++
Sbjct: 170 ARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFS 229

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            +IDG  +CG    A    D M++ G   NV T+NAL+    +   +  A ++ + M+  
Sbjct: 230 TLIDGLCKCGQTDEA--CNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDK 287

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G+ PDV TY++L+ A C    +  AL+L   M  RG TP+++T+  +I G C      EA
Sbjct: 288 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEA 347

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            ++  ++    L  D + F IL     +    ++A  + ++ + +N
Sbjct: 348 FQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 393


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 244/473 (51%), Gaps = 8/473 (1%)

Query: 94   LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
            L   L+  K M ++G    +   D   +  ++  L   GK+  A  L   M+ KG  P+V
Sbjct: 928  LDSALELFKEMEESG----SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNV 983

Query: 154  LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            +T++ L++ LCK G L++A  +++ M+    SPN  TYN  I G+C++  +D+A HL   
Sbjct: 984  VTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEE 1043

Query: 214  MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
            M + G +PN VT+ +L+ A CK G   DA+  + EV+ +       ++ T   L+D + K
Sbjct: 1044 MVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLV-EVMVEKG--YVPNLFTYNSLLDMFCK 1100

Query: 274  NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
              +  +A  L + M QK    ++V+YN +I G C    +        QML    +PD++T
Sbjct: 1101 KDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVT 1160

Query: 334  YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
            +NT+++ +CK  ++D A   + ++ ++G  P+ ++Y +++ GLC      +A   L  M 
Sbjct: 1161 FNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMT 1220

Query: 394  EKS-VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
             K    P+   +N +IDG  +   +  A+ +   MLS G++ +  T++ +I +  +   +
Sbjct: 1221 RKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFM 1280

Query: 453  FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             +A ++ + ML +G  P   TY  LI   C  G++  AL++   +L +G  PD++T++  
Sbjct: 1281 DEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIF 1340

Query: 513  IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            I     RG +++A E+   +   GL  D + +  L K +     ++ A D+ +
Sbjct: 1341 IDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFE 1393



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 217/430 (50%), Gaps = 3/430 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+   C   ++  ALWL  +M+ +G  PDV+++  ++N LCK+  +++A  V+ +M +  
Sbjct: 271 VLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRG 330

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY   + G+CRV +LD A+ L   M   G RPN +T+N ++H  C++  +  A 
Sbjct: 331 CQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAH 390

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L  ++         D I  + ++  + K G   +A  L   M ++  + D+   + LI
Sbjct: 391 QVLQMMI---QTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLI 447

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C    I SA       +     PDV+ Y+ L++ LCK  +L EA  +  V+ K    
Sbjct: 448 DALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCY 507

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y +++ GLC    I  A      M    V+P+   ++++I  + +  +L +AF +
Sbjct: 508 PDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKM 567

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M       +V T++ALI    + G++  AF + +EML  G  P++ TYN LI   C 
Sbjct: 568 LERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCK 627

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           +  +  A ++ + M ++  TPD ITYT LI G C    ++EA  V  +++  G   D + 
Sbjct: 628 INKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMT 687

Query: 544 FRILKKRYRR 553
           +  L +  ++
Sbjct: 688 YGTLLRALQK 697



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 214/438 (48%), Gaps = 4/438 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GKI  A  L  +M +KG       H  ++  LC  G    A    REMS+  P P+  T
Sbjct: 174 AGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCP-PDSVT 232

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I G  + + LD A+ L   M +NG  PN  ++N ++H  CK   + +A+  L +++
Sbjct: 233 YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV 292

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                    DV++ T +++   K     +A  + + M Q+  Q +++ Y  L++GFC  G
Sbjct: 293 TRG---CPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVG 349

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           D+  A     +M +RG+ P+ ITYN +++  C++  ++ A     ++ +TG  PD I+Y 
Sbjct: 350 DLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYS 409

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           TII G C  G + +A + L  M+ +   P+    + +ID   +   + +A  +  + +  
Sbjct: 410 TIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGM 469

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
             + +V  ++ LI A  +   + +A S    M+ +  +PDV TYN ++   C    I+ A
Sbjct: 470 DCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDA 529

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
             L+D M   G+ PD++TY+ +I   C   N+  A ++  +++      D + +  L   
Sbjct: 530 FLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALING 589

Query: 551 YRRMKESDKARDIHQKWL 568
             +    DKA D+ Q+ L
Sbjct: 590 LCKAGTVDKAFDVFQEML 607



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 216/444 (48%), Gaps = 5/444 (1%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            +I  LC  G IGTA  L ++M + G   +V+ HN ++  LC    L+ A  + +EM E  
Sbjct: 883  LIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESG 942

Query: 184  P-SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               P+  TY+  +    +  ++D A  L   M + G  PN VT++ L+H LCK G L +A
Sbjct: 943  SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 1002

Query: 243  VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
               L  +        + +++T   ++D + K G   +A  L  +M     Q ++V Y VL
Sbjct: 1003 TALLQRMTR---SGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVL 1059

Query: 303  INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            ++ FC  G    A      M+++G++P++ TYN+LL+  CK+ +++ A      + + G 
Sbjct: 1060 LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGC 1119

Query: 363  APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             P+ +SY T+I GLC    + +    L  ML  + VP+   +N IID   +   +  A+ 
Sbjct: 1120 VPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYE 1179

Query: 423  IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL-DGIFPDVFTYNLLIGAS 481
            + +L+   G + N+ T+N+L+    +      A  L +EM    G  PD+ TYN +I   
Sbjct: 1180 LFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGL 1239

Query: 482  CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
            C    +  A +L+ +ML  G+ PD +TY+ +I   C    M EA  V   +   G     
Sbjct: 1240 CKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGA 1299

Query: 542  IPFRILKKRYRRMKESDKARDIHQ 565
            I +  L   + +    DKA +I Q
Sbjct: 1300 ITYGTLIDGFCKTGNLDKALEILQ 1323



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 207/418 (49%), Gaps = 3/418 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI  LC   ++  A  +  KMIQ+G  P+V+T+  LV+  C++GDL+ A  ++
Sbjct: 299 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELV 358

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           R+M+E    PN  TYN  +  +CR N++++A  +   M   G  P+ + ++ ++   CK 
Sbjct: 359 RKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKA 418

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L +A   L +++         DV   + L+D+  K      A  L       +   D+
Sbjct: 419 GKLREAHDLLEQMIRRG---CRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDV 475

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           VAY++LI+  C    +  A ++   M+K    PDV+TYN++++ LCK  ++++A   +  
Sbjct: 476 VAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDR 535

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   GV PD ++Y  +I   C   ++  A + L  M E   VP+   ++ +I+G  + G 
Sbjct: 536 MRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGT 595

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  AF +   ML  G + N+ T+N LI    +   +  A  + + M      PD  TY  
Sbjct: 596 VDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTC 655

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           LI   CN   +  A ++  EM  +G  PD +TY  L++      N++  E++  +++ 
Sbjct: 656 LINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 222/443 (50%), Gaps = 4/443 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H +++R LC  G+   A+   R+M  K   PD +T+N ++N L K   L+ A  ++ EM 
Sbjct: 199 HKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMV 257

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   +PN  +YN  + G+C+ N ++ AL L   M   G  P+ V++  +++ LCK   + 
Sbjct: 258 DNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVD 317

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A + + +++         +VIT   L+D + + GD   A+ L   M ++  + + + YN
Sbjct: 318 EACRVMDKMIQRG---CQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYN 374

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +++ FC   D+  A      M++ G  PD I Y+T+++  CK GKL EA      + + 
Sbjct: 375 NIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRR 434

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  PD     T+I  LC    I  A+E L   +     P+   ++++I    +   L  A
Sbjct: 435 GCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEA 494

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
            S  D+M+      +V T+N+++    +   I DAF L   M   G+ PDV TY+++I +
Sbjct: 495 ESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHS 554

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C   ++  A ++ + M      PD++TY+ LI G C  G + +A +VF ++   G A +
Sbjct: 555 FCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPN 614

Query: 541 HIPFRILKKRYRRMKESDKARDI 563
            + +  L     ++ + ++A ++
Sbjct: 615 LVTYNTLIDGLCKINKVEQAAEM 637



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 204/394 (51%), Gaps = 5/394 (1%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            +I   C  G+I  A  L  +M+  G  P+V+T+  L++  CK G  E A  ++  M E  
Sbjct: 1024 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 1083

Query: 184  PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              PN  TYN+ +  +C+ +E+++A  L S+M   G  PN V++N ++  LCK   + + V
Sbjct: 1084 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 1143

Query: 244  KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
              L ++L+++      D++T   ++D+  K      A  L+N + +     ++V YN L+
Sbjct: 1144 LLLEQMLSNN---CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 1200

Query: 304  NGFCLNGDISSAFAYFCQML-KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            +G C +     A     +M  K+G  PD+ITYNT+++ LCK  ++D A   +  +   G+
Sbjct: 1201 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 1260

Query: 363  APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            APD ++Y  +I  LC    + +A   L  ML+    P    +  +IDG+ + G+L  A  
Sbjct: 1261 APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALE 1320

Query: 423  IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
            I  L+LS G   +V TF+  I   ++ G +  A  L + ML  G+ PD  TYN L+   C
Sbjct: 1321 ILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 1380

Query: 483  NLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            +      A+ L++ M + G  PD  TYT L+ GH
Sbjct: 1381 DASLTEDAVDLFEVMRQCGCEPDNATYTTLV-GH 1413



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 204/416 (49%), Gaps = 5/416 (1%)

Query: 146  QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
            Q+G   D  T N L+  L ++   + A  V R  +++  SPN  T+   I G CR  ++ 
Sbjct: 837  QEGYNHDTYTCNCLLQALLRLKRPKDALQVYR--NKLCCSPNMFTFTILIHGLCRAGDIG 894

Query: 206  KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
             A  L   M  +G+  N + HN+++  LC    L  A++   E+  ++ G    DV T +
Sbjct: 895  TAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEM--EESGSCPPDVFTYS 952

Query: 266  ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
             ++DS  K+G    A  L  DM  K    ++V Y+ L++G C  G +  A A   +M + 
Sbjct: 953  TIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS 1012

Query: 326  GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
            G  P+++TYNT+++  CK G++DEA H    +   G  P+ ++Y  ++   C  G    A
Sbjct: 1013 GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDA 1072

Query: 386  REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
               +  M+EK  VP    +N ++D + +  ++  A  +   M+  G   NV ++N +I  
Sbjct: 1073 IGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAG 1132

Query: 446  ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
              +   + +   L ++ML +   PD+ T+N +I A C    + +A +L++ +   G TP+
Sbjct: 1133 LCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPN 1192

Query: 506  IITYTELIKGHCARGNMKEAEEVFAKI-QTLGLAIDHIPFRILKKRYRRMKESDKA 560
            ++TY  L+ G C      +AE +  ++ +  G + D I +  +     + K  D+A
Sbjct: 1193 LVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 1248



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 126/521 (24%), Positives = 230/521 (44%), Gaps = 65/521 (12%)

Query: 97   NLDR-LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
            NLD   K +      +C    D   + A+I  LC  G +  A  + ++M+  G  P+++T
Sbjct: 560  NLDSAFKMLERMKEAKCV--PDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVT 617

Query: 156  HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
            +N L++ LCKI  +E+A  ++  M +   +P+  TY   I G C  + L++A  +   M 
Sbjct: 618  YNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMK 677

Query: 216  NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD--------------- 260
            + G  P+R+T+  L+ AL K   L    + L E+ A ++G+  ++               
Sbjct: 678  DKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNANGARLHRFVIRGDVLM 737

Query: 261  ---------VITSTILMDSYFKNGD------KFQALAL-------------------WN- 285
                     + + T ++DS  + G       +++  A+                   W  
Sbjct: 738  MAMAVPMAALTSQTRVLDSKDQQGQFSPRPHQYRVTAVATQGGFHHKIVRILNSRFAWEY 797

Query: 286  -----DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
                 + F   + T +V    ++ G   NGD +  F +     + G+  D  T N LL  
Sbjct: 798  AETALERFTGKLTTTVVGK--VLQGV-RNGDAALGF-FDWATSQEGYNHDTYTCNCLLQA 853

Query: 341  LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
            L +  +  +A   Y   +K   +P+  ++  +I GLC  GDI  A E L  M    V   
Sbjct: 854  LLRLKRPKDALQVY--RNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQN 911

Query: 401  PHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
              + NV+I G      L +A  + +++  S     +VFT++ ++ +  + G + DA  L 
Sbjct: 912  VILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLV 971

Query: 460  KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            ++M+  G  P+V TY+ L+   C  G +  A  L   M R G +P+I+TY  +I GHC  
Sbjct: 972  EDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKL 1031

Query: 520  GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            G + EA  +  ++   G   + + + +L   + +  +++ A
Sbjct: 1032 GRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDA 1072



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 208/427 (48%), Gaps = 30/427 (7%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            +I  +C   ++  A  L   + + G  P+++T+N LV+ LCK    ++A++++REM+  +
Sbjct: 1164 IIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQ 1223

Query: 184  P-SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              SP+  TYN  I G C+   +D+A  LF  M ++G+ P+ VT++I++ +LCK   + +A
Sbjct: 1224 GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEA 1283

Query: 243  VKFLGEVLAD--DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
               L  +L +  D G      IT   L+D + K G+  +AL +   +  K    D+V ++
Sbjct: 1284 NNVLELMLKNGFDPG-----AITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFS 1338

Query: 301  VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            + I+     G +  A      ML+ G +PD +TYNTLL   C     ++A   + V+ + 
Sbjct: 1339 IFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQC 1398

Query: 361  GVAPDQISYKTIIQGLC---IHGDIV------------KAREFLLSMLEKSVVPEPHI-- 403
            G  PD  +Y T++  L     + D++            K    L S LE S+  E  +  
Sbjct: 1399 GCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRL 1458

Query: 404  WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
               I+D +G+CG   +A  + + M       NV  ++A++           AF L + M 
Sbjct: 1459 GCAIVDMFGKCGSPQDARKVFEGM----DQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMG 1514

Query: 464  LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR-RGITPDIITYTELIKGHCARGNM 522
            L+G+ PD  T+  L+   C+ G +  A+  +  + R  G+ P +  ++ +I      G +
Sbjct: 1515 LEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLV 1574

Query: 523  KEAEEVF 529
             EAE++ 
Sbjct: 1575 NEAEDLM 1581



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 144/311 (46%), Gaps = 1/311 (0%)

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           ++     L++   K     QA  L+    +     D V Y+ LI+GF   G I  A+  F
Sbjct: 125 EIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELF 184

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M ++G       + ++L  LC  G+  +A   +  +SKT   PD ++Y T+I GL   
Sbjct: 185 DEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKS 243

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
             +  A   L  M++    P    +N ++ G+ +   + NA  + + M++ G   +V ++
Sbjct: 244 DRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSY 303

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
             +I    +   + +A  +  +M+  G  P+V TY  L+   C +G +  A++L  +M  
Sbjct: 304 TTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE 363

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
           RG  P+ ITY  ++   C R +M+ A +V   +   G   D I +  +   + +  +  +
Sbjct: 364 RGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLRE 423

Query: 560 ARDIHQKWLLR 570
           A D+ ++ + R
Sbjct: 424 AHDLLEQMIRR 434



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 134/273 (49%), Gaps = 1/273 (0%)

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           Q +I   N L+N        S A   F   ++  +  D +TY+TL++   + GK+  A  
Sbjct: 123 QHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYE 182

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            +  +++ G+      +K+I++GLC  G    A      M  K+  P+   +N +I+G  
Sbjct: 183 LFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLS 241

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +   L +A  + + M+  G + NVF++N ++    +   + +A  L ++M+  G  PDV 
Sbjct: 242 KSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVV 301

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           +Y  +I   C L  +  A ++ D+M++RG  P++ITY  L+ G C  G++  A E+  K+
Sbjct: 302 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 361

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
              G   + I +  +   + R  + ++A  + Q
Sbjct: 362 TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQ 394



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 154/369 (41%), Gaps = 41/369 (11%)

Query: 88   NALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
            N L+L+LK   D         P   T  T       +I   C  G +  AL + + ++ K
Sbjct: 1285 NVLELMLKNGFD---------PGAITYGT-------LIDGFCKTGNLDKALEILQLLLSK 1328

Query: 148  GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
            G+ PDV+T +  ++ L K G L +A  ++  M      P+  TYN  + G+C  +  + A
Sbjct: 1329 GSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDA 1388

Query: 208  LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK----------- 256
            + LF  M   G  P+  T+  LV  L  K    D +  + + + D   K           
Sbjct: 1389 VDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEA 1448

Query: 257  ---ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
                 +DV     ++D + K G    A  ++  M Q+N    +V ++ ++  +  +    
Sbjct: 1449 SIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRN----VVLWSAMLGVYVFHKQEE 1504

Query: 314  SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA-SHFYGVLSKTGVAPDQISYKTI 372
             AF  +  M   G  PD +T+ +LL   C  G LD A   F  +    G+ P    +  +
Sbjct: 1505 QAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCV 1564

Query: 373  IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL---MLS 429
            I  L   G + +A + +L M  K   P    WN ++  Y  CGD   A  + +L     S
Sbjct: 1565 IDLLGRLGLVNEAEDLMLGMPCK---PSAATWNCLLSAYKICGDFERALRVAELNPTQAS 1621

Query: 430  FGVSSNVFT 438
            + + SN++ 
Sbjct: 1622 YLLLSNMYA 1630



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 1/135 (0%)

Query: 433  SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
            S N+FTF  LI    R G I  A+ L KEM   G+  +V  +N++I   C+   +  AL+
Sbjct: 874  SPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALE 933

Query: 493  LYDEMLRRG-ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            L+ EM   G   PD+ TY+ ++      G + +A  +   + + G + + + +  L    
Sbjct: 934  LFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGL 993

Query: 552  RRMKESDKARDIHQK 566
             +  + D+A  + Q+
Sbjct: 994  CKAGKLDEATALLQR 1008


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 223/418 (53%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  L L  K   A+ L  +M+Q+G  PD++T+  +VN LCK GD++ A  ++++M + 
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +   +   YN  I G C+   +D AL+LF+ M N GIRP+  T++ L+  LC  G   DA
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +++   + K   +V+T + L+D++ K G   +A  L+++M +++I  DI  Y+ L
Sbjct: 313 SRLLSDMI---ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           INGFC++  +  A   F  M+ +   P+V+TY+TL+   CK  +++E    +  +S+ G+
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             + ++Y T+I G     D   A+     M+   V P    +N+++DG  + G L+ A  
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 489

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + +    +  +++T+N +I    + G + D + L   + L G+ P+V  YN +I   C
Sbjct: 490 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFC 549

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             G    A  L  +M   G  P+  TY  LI+     G+ + + E+  ++++ G A D
Sbjct: 550 RKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 221/450 (49%), Gaps = 3/450 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +   I   C   ++  AL +  KM++ G  PD++T + L+N  C    +  A  ++
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M EM   P+  T+   I G    N+  +A+ L   M   G +P+ VT+  +V+ LCK+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G +  A+  L ++   + GK  +DV+    ++D   K      AL L+ +M  K I+ D+
Sbjct: 237 GDIDLALSLLKKM---EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y+ LI+  C  G  S A      M++R   P+V+T++ L++   K+GKL EA   Y  
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + K  + PD  +Y ++I G C+H  + +A+     M+ K   P    ++ +I G+ +   
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +     +   M   G+  N  T+  LI    +     +A  + K+M+  G+ P++ TYN+
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L+   C  G +  A+ +++ + R  + PDI TY  +I+G C  G +++  E+F  +   G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           ++ + I +  +   + R    ++A  + +K
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKK 563



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 210/415 (50%), Gaps = 3/415 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K+  A+ L   M++    P ++  N L++ + K+   E    +  +M  +  S +  TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
            FI  +CR ++L  AL + + M   G  P+ VT + L++  C    + DAV  + +++  
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV-- 180

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
            +     D  T T L+   F +    +A+AL + M Q+  Q D+V Y  ++NG C  GDI
Sbjct: 181 -EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A +   +M K     DV+ YNT+++ LCK   +D+A + +  +   G+ PD  +Y ++
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I  LC +G    A   L  M+E+ + P    ++ +ID + + G L  A  + D M+   +
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             ++FT+++LI        + +A  + + M+    FP+V TY+ LI   C    +   ++
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           L+ EM +RG+  + +TYT LI G     +   A+ VF ++ ++G+  + + + IL
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 214/437 (48%), Gaps = 14/437 (3%)

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
           G+  W R      G   ++L      N L  I  ++ A  +  +M + RP P+   +N  
Sbjct: 35  GSGCWERSFASASGDYREILR-----NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKL 89

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           ++   ++N+ +  + L   M   GI  +  T++I ++  C++  L  A+  L +++    
Sbjct: 90  LSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK--- 146

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
                D++T + L++ Y  +     A+AL + M +   + D   +  LI+G  L+   S 
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A A   QM++RG  PD++TY T++N LCK+G +D A      + K  +  D + Y TII 
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID---GYGRCGDLSNAFSIRDLMLSFG 431
           GLC +  +  A      M  K + P+   ++ +I     YGR  D S   S    M+   
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD---MIERK 323

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           ++ NV TF+ALI A  + G + +A  L  EM+   I PD+FTY+ LI   C    +  A 
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            +++ M+ +   P+++TY+ LIKG C    ++E  E+F ++   GL  + + +  L   +
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443

Query: 552 RRMKESDKARDIHQKWL 568
            + ++ D A+ + ++ +
Sbjct: 444 FQARDCDNAQMVFKQMV 460



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 180/373 (48%), Gaps = 7/373 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  +I  LC    +  AL L  +M  KG  PDV T++ L++ LC  G    A 
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M E + +PN  T++A I  + +  +L +A  L+  M    I P+  T++ L++  
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C    L D  K + E++   D     +V+T + L+  + K     + + L+ +M Q+ + 
Sbjct: 374 CMHDRL-DEAKHMFELMISKD--CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            + V Y  LI+GF    D  +A   F QM+  G  P+++TYN LL+ LCK GKL +A   
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  L ++ + PD  +Y  +I+G+C  G +    E   ++  K V P    +N +I G+ R
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G    A S+   M   G   N  T+N LI A  R G    +  L KEM   G   D  T
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610

Query: 474 YNLLIGASCNLGH 486
               IG   N+ H
Sbjct: 611 ----IGLVTNMLH 619



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 144/314 (45%), Gaps = 42/314 (13%)

Query: 82  NPQAV-FNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
           NP  V F+AL D  +KE  L   + + D   ++ +++ D   + ++I   C+  ++  A 
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            +   MI K   P+V+T++ L+   CK   +E+   + REMS+     N  TY   I G+
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            +  + D A  +F  M + G+ PN +T+NIL+  LCK G L                   
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA------------------ 485

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
                               +A+ ++  + +  ++ DI  YN++I G C  G +   +  
Sbjct: 486 --------------------KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           FC +  +G  P+VI YNT+++  C++G  +EA      + + G  P+  +Y T+I+    
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585

Query: 379 HGDIVKAREFLLSM 392
            GD   + E +  M
Sbjct: 586 DGDREASAELIKEM 599



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 110/231 (47%), Gaps = 6/231 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+  C   ++   + L R+M Q+G V + +T+  L++   +  D + A  V ++M 
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            +   PN  TYN  + G C+  +L KA+ +F  +  + + P+  T+NI++  +CK G + 
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520

Query: 241 DAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           D      E+  +   K  S +VI    ++  + + G K +A +L   M +     +   Y
Sbjct: 521 DG----WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
           N LI     +GD  ++     +M   GF  D  T   + N L   G+LD++
Sbjct: 577 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 626



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 60/123 (48%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R T+E D   +  +I  +C  GK+     L   +  KG  P+V+ +N +++  C+ G  E
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +AD ++++M E  P PN  TYN  I    R  + + +  L   M + G   +  T  ++ 
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 615

Query: 231 HAL 233
           + L
Sbjct: 616 NML 618


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 224/454 (49%), Gaps = 3/454 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++   C  G +  A  L   M  KG  P + T+N L+N LCK G  E+A  V+
Sbjct: 258 DLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVL 317

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM  +   PN AT+N  +   CR  ++ +A  +F+ M   G+ P+ ++ + +V    + 
Sbjct: 318 DEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRN 377

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G LG A+ +  ++          D +  TIL++ Y +N D   AL + N+M ++    D+
Sbjct: 378 GELGRALAYFEKM---KGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDV 434

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YN L+NG C    +  A   F +M++RG  PD  T  TL++  CK G + +A   +  
Sbjct: 435 VTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFET 494

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           ++   + PD ++Y T++ G C  G++ KA+E    M+ + + P    ++++I+G+   G 
Sbjct: 495 MTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGL 554

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +S AF + D M   G+   + T N +I    R G++  A      M+ +G+ PD  TYN 
Sbjct: 555 VSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNT 614

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI +     +   A  L + M  RG+ P+++TY  ++ G    G M+EAE V  K+   G
Sbjct: 615 LINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKG 674

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +  D   +  L   Y       +A  +H + L R
Sbjct: 675 INPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQR 708



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 227/444 (51%), Gaps = 7/444 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A  +    ++ G + +V T N +VN LCK G L+     + EM E     +  TY
Sbjct: 203 GWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTY 262

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  +  YCR   + +A  L   MA  G++P   T+N L++ LCK+G    A + L E+L 
Sbjct: 263 NTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLG 322

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
              G   +    + +L++S  K  D ++A  ++N+M Q+ +  D+++++ ++  F  NG+
Sbjct: 323 --VGLCPNAATFNPMLVESCRKE-DVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGE 379

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A AYF +M   G +PD + Y  L+N  C+   +  A      + + G   D ++Y T
Sbjct: 380 LGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNT 439

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++ GLC    +  A E    M+E+ V P+ +    +I GY + G+++ A S+ + M    
Sbjct: 440 LLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRS 499

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  +V T+N L+    + G +  A  L  +M+   IFP   ++++LI   C+LG +  A 
Sbjct: 500 LKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAF 559

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +L+DEM  +GI P ++T   +IKG+   GN+ +A +    + + G+  D I +  L   +
Sbjct: 560 RLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSF 619

Query: 552 RRMKESDKA----RDIHQKWLLRN 571
            + +  D+A     ++ ++ LL N
Sbjct: 620 VKEENFDRAFFLINNMEERGLLPN 643



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 188/356 (52%), Gaps = 3/356 (0%)

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           NA +    +V  +D A  ++     +G   N  T NI+V+ALCK G L +   +L E+  
Sbjct: 193 NALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEM-- 250

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            ++    +D++T   L+++Y + G   +A  L + M  K ++  +  YN LING C  G 
Sbjct: 251 -EEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGS 309

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A     +ML  G  P+  T+N +L   C++  + EA   +  + + GV PD IS+ +
Sbjct: 310 YERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSS 369

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           I+     +G++ +A  +   M    +VP+  I+ ++I+GY R  D+S A  +R+ M+  G
Sbjct: 370 IVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERG 429

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              +V T+N L+    RG  + DA  L KEM+  G+FPD +T   LI   C  G++  AL
Sbjct: 430 CVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKAL 489

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            L++ M  R + PD++TY  L+ G C  G M++A+E++  + +  +   +I F IL
Sbjct: 490 SLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSIL 545



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 164/311 (52%), Gaps = 3/311 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I   C    +  AL +R +M+++G V DV+T+N L+N LC+   L+ AD + +EM 
Sbjct: 402 YTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMV 461

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    P+  T    I GYC+   + KAL LF TM    ++P+ VT+N L+   CK G + 
Sbjct: 462 ERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEME 521

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A +   ++++ +        I+ +IL++ +   G   +A  LW++M +K I+  +V  N
Sbjct: 522 KAKELWYDMISRE---IFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCN 578

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I G+   G++S A  +   M+  G  PD ITYNTL+N   K+   D A      + + 
Sbjct: 579 TIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEER 638

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+ ++Y  I+ G   HG + +A   L  M++K + P+   +  +I+GY    ++  A
Sbjct: 639 GLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEA 698

Query: 421 FSIRDLMLSFG 431
           F + D ML  G
Sbjct: 699 FRVHDEMLQRG 709



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 148/310 (47%)

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           V+   +L+ +Y +     +    +  + ++     I A N L+      G +  A+  + 
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
             +K G + +V T N ++N LCK GKLD    +   + + GV  D ++Y T++   C  G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            + +A   +  M  K + P    +N +I+G  + G    A  + D ML  G+  N  TFN
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            +++   R   +++A  +  EML  G+ PD+ +++ ++G     G +  AL  +++M   
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G+ PD + YT LI G+C   ++  A ++  ++   G  +D + +  L     R K  D A
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453

Query: 561 RDIHQKWLLR 570
            ++ ++ + R
Sbjct: 454 DELFKEMVER 463



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 124/249 (49%), Gaps = 3/249 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D+     +I   C  G +  AL L   M  +   PDV+T+N L++  CK+G++EKA  + 
Sbjct: 468 DFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELW 527

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M      P+  +++  I G+C +  + +A  L+  M   GI+P  VT N ++    + 
Sbjct: 528 YDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRA 587

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A  FL  ++++       D IT   L++S+ K  +  +A  L N+M ++ +  ++
Sbjct: 588 GNLSKANDFLNTMISEG---VPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNL 644

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YN ++ GF  +G +  A     +M+ +G  PD  TY +L+N    +  + EA   +  
Sbjct: 645 VTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDE 704

Query: 357 LSKTGVAPD 365
           + + G  PD
Sbjct: 705 MLQRGFVPD 713



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 113/234 (48%), Gaps = 4/234 (1%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           N+ +  ++ +T  +R +L+ D   +  ++   C  G++  A  L   MI +   P  ++ 
Sbjct: 484 NMTKALSLFETMTLR-SLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISF 542

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           + L+N  C +G + +A  +  EM E    P   T N  I GY R   L KA    +TM +
Sbjct: 543 SILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMIS 602

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G+ P+ +T+N L+++  K+     A   +  +   ++     +++T   ++  + ++G 
Sbjct: 603 EGVPPDCITYNTLINSFVKEENFDRAFFLINNM---EERGLLPNLVTYNAILGGFSRHGR 659

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             +A  + + M  K I  D   Y  LING+    ++  AF    +ML+RGF+PD
Sbjct: 660 MQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 237/487 (48%), Gaps = 20/487 (4%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E LD    M +T     T   +      ++  LC  G+I  A+ L  +M++ G  P  
Sbjct: 165 VSEALDFFHQMFET-----TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPS-PNCATYNAFITGYCRVNELDKALHLFS 212
           +T+  +V+ +CK GD   A +++R+M E+    PN   Y+A I   C+      A +LF+
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M   GI P+  T+N ++   C  G   DA + L E+L   + K + DV+T   L++++ 
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML---ERKISPDVVTYNALINAFV 336

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G  F+A  L+++M  + I  + + YN +I+GFC    + +A   F  M  +G  PDV 
Sbjct: 337 KEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF 396

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           T+ TL++  C   ++D+       + + G+  + ++Y T+I G C+ GD+  A +    M
Sbjct: 397 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 456

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF-----------GVSSNVFTFNA 441
           +   V P+    N ++DG    G L +A  +   M              GV  +V T+N 
Sbjct: 457 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNI 516

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI      G   +A  L +EM   GI PD  TY+ +I   C    +  A Q++  M  + 
Sbjct: 517 LICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS 576

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
            +P+++T+  LI G+C  G + +  E+F ++   G+  D I +  L   +R++   + A 
Sbjct: 577 FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGAL 636

Query: 562 DIHQKWL 568
           DI Q+ +
Sbjct: 637 DIFQEMI 643



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 222/462 (48%), Gaps = 15/462 (3%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D      ++  LC+  ++  AL    +M +    P+V+T   L+N LC+ G + +A 
Sbjct: 145 LHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN-NGIRPNRVTHNILVHA 232
            ++  M E    P   TY   + G C+  +   AL+L   M   + I PN V ++ ++ +
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LCK G   DA     E+    +     D+ T   ++  +  +G    A  L  +M ++ I
Sbjct: 265 LCKDGRHSDAQNLFTEM---QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D+V YN LIN F   G    A   + +ML RG +P+ ITYN++++  CKQ +LD A  
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 381

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            + +++  G +PD  ++ T+I G C    I    E L  M  + +V     +N +I G+ 
Sbjct: 382 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 441

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL-----KKEMLLD-- 465
             GDL+ A  +   M+S GV  ++ T N L+      G + DA  +     K +M LD  
Sbjct: 442 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS 501

Query: 466 ----GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
               G+ PDV TYN+LI    N G    A +LY+EM  RGI PD ITY+ +I G C +  
Sbjct: 502 HPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           + EA ++F  + +   + + + F  L   Y +    D   ++
Sbjct: 562 LDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLEL 603



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 219/432 (50%), Gaps = 17/432 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  LC  G+   A  L  +M +KG  PD+ T+N ++   C  G    A+ +++EM 
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E + SP+  TYNA I  + +  +  +A  L+  M   GI PN +T+N ++   CK+  L 
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL- 376

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA + +  ++A      + DV T T L+D Y         + L ++M ++ +  + V YN
Sbjct: 377 DAAEDMFYLMATK--GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYN 434

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+GFCL GD+++A     QM+  G  PD++T NTLL+ LC  GKL +A   +  + K+
Sbjct: 435 TLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 494

Query: 361 -----------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
                      GV PD ++Y  +I GL   G  ++A E    M  + +VP+   ++ +ID
Sbjct: 495 KMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  +   L  A  +   M S   S NV TFN LI    + G + D   L  EM   GI  
Sbjct: 555 GLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVA 614

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D   Y  LI     +G+I+ AL ++ EM+  G+ PD IT   ++ G  ++   +E E   
Sbjct: 615 DAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK---EELERAV 671

Query: 530 AKIQTLGLAIDH 541
           A ++ L +++ +
Sbjct: 672 AMLEDLQMSVGY 683



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 199/405 (49%), Gaps = 4/405 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            + L +KM +K    D+ + N L+   C    L  A     +++++   P+  T+   + 
Sbjct: 98  VISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLH 157

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C  + + +AL  F  M     RPN VT   L++ LC++G + +AV  L  ++  +DG 
Sbjct: 158 GLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM--EDGL 215

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSA 315
             + +   TI+ D   K GD   AL L   M +  +I  ++V Y+ +I+  C +G  S A
Sbjct: 216 QPTQITYGTIV-DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA 274

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F +M ++G  PD+ TYN+++   C  G+  +A      + +  ++PD ++Y  +I  
Sbjct: 275 QNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
               G   +A E    ML + ++P    +N +IDG+ +   L  A  +  LM + G S +
Sbjct: 335 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 394

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           VFTF  LI        I D   L  EM   G+  +  TYN LI   C +G ++ AL L  
Sbjct: 395 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 454

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           +M+  G+ PDI+T   L+ G C  G +K+A E+F  +Q   + +D
Sbjct: 455 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 499



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 202/411 (49%), Gaps = 16/411 (3%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM-RPSPNCATY--NA 193
           A+ L   M++   +P V+    L+  + +   +E+ D VI    +M R    C  Y  N 
Sbjct: 63  AIDLFSDMLRSRPLPSVVDFCKLMGVVVR---MERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            I  +C  ++L  AL  F  +   G+ P+ VT   L+H LC +  + +A+ F  ++    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF--- 176

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
           +     +V+T T LM+   + G   +A+AL + M +  +Q   + Y  +++G C  GD  
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 314 SAFAYFCQMLKRG-FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           SA     +M +    +P+V+ Y+ +++ LCK G+  +A + +  + + G+ PD  +Y ++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I G C  G    A + L  MLE+ + P+   +N +I+ + + G    A  + D ML  G+
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 356

Query: 433 SSNVFTFNALI---LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
             N  T+N++I     + R  +  D F L   M   G  PDVFT+  LI   C    I  
Sbjct: 357 IPNTITYNSMIDGFCKQDRLDAAEDMFYL---MATKGCSPDVFTFTTLIDGYCGAKRIDD 413

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            ++L  EM RRG+  + +TY  LI G C  G++  A ++  ++ + G+  D
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 464



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 191/414 (46%), Gaps = 22/414 (5%)

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           +I  LE A  +  +M   RP P+   +   +    R+   D  + L+  M    IR +  
Sbjct: 56  EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIY 115

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           + NIL+   C    L  A+   G++          DV+T T L+          +AL  +
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITK---LGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           + MF+   + ++V +  L+NG C  G I  A A   +M++ G  P  ITY T+++ +CK+
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 345 G----------KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           G          K++E SH         + P+ + Y  II  LC  G    A+     M E
Sbjct: 233 GDTVSALNLLRKMEEVSH---------IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K + P+   +N +I G+   G  S+A  +   ML   +S +V T+NALI A  + G  F+
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L  EML  GI P+  TYN +I   C    +  A  ++  M  +G +PD+ T+T LI 
Sbjct: 344 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 403

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+C    + +  E+  ++   GL  + + +  L   +  + + + A D+ Q+ +
Sbjct: 404 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 457



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 166/342 (48%), Gaps = 16/342 (4%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   + A+I      GK   A  L  +M+ +G +P+ +T+N +++  CK   L+ A+
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 380

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M+    SP+  T+   I GYC    +D  + L   M   G+  N VT+N L+H  
Sbjct: 381 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 440

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN-- 291
           C  G L  A+    ++++        D++T   L+D    NG    AL ++  M QK+  
Sbjct: 441 CLVGDLNAALDLSQQMIS---SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM-QKSKM 496

Query: 292 ----------IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
                     ++ D++ YN+LI G    G    A   + +M  RG +PD ITY+++++ L
Sbjct: 497 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CKQ +LDEA+  +  +     +P+ +++ T+I G C  G +    E    M  + +V + 
Sbjct: 557 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADA 616

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            I+  +I G+ + G+++ A  I   M+S GV  +  T   ++
Sbjct: 617 IIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 141/292 (48%), Gaps = 34/292 (11%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            ++L+  M +K I+ DI ++N+LI  FC    +  A + F ++ K G  PDV+T+ TLL+
Sbjct: 98  VISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLH 157

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LC + ++ EA  F+  + +T   P+ +++ T++ GLC  G IV+A   L  M+E  + P
Sbjct: 158 GLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +  I+DG  + GD  +A ++                                  L+
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNL----------------------------------LR 243

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           K   +  I P+V  Y+ +I + C  G    A  L+ EM  +GI PD+ TY  +I G C+ 
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           G   +AE++  ++    ++ D + +  L   + +  +  +A +++ + L R 
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRG 355


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 221/446 (49%), Gaps = 5/446 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGT-VPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++   + G +  A+ + R+M   G   P+  ++N ++  L K G    A  +  EM E 
Sbjct: 158 AVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEK 217

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN  I G+ +  +L+    L+S M  +G++PN +T+N+L+  LC+ G +G+ 
Sbjct: 218 AVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGET 277

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E+ +    K   D  T +IL D + + GD    L+L+ +  +K ++      ++L
Sbjct: 278 AAVLDEMASR---KMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSIL 334

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +NG C +G IS A      ++  G L   + YNTL+N  C+ G L+ A   +  +    +
Sbjct: 335 LNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLI 394

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD I+Y  +I GL     I +A + ++ M +  V P    +N +ID YGR G L   F 
Sbjct: 395 RPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFI 454

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I   M   G+  NV ++ +++ A  + G I +A ++  +M +  + P    YN +I A  
Sbjct: 455 ILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYI 514

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G    A  L ++M   G+ P I+TY  LIKG C +  + EAEE+   ++  GLA D I
Sbjct: 515 ECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVI 574

Query: 543 PFRILKKRYRRMKESDKARDIHQK-W 567
            +  L         +D+A ++ ++ W
Sbjct: 575 SYNTLISACCYRSNTDRALELEKEMW 600



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 217/439 (49%), Gaps = 11/439 (2%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G + +   L  +M++ G  P+V+T+N L++ LC+ G + +   V+ EM+  +  P+  TY
Sbjct: 237 GDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTY 296

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +    G+ R  +    L LF      G++    T +IL++ LCK G +  A + L  ++ 
Sbjct: 297 SILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLV- 355

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            + G   + VI +T L++ Y + GD   A +++  M  + I+ D + YN LING      
Sbjct: 356 -NSGLLQTTVIYNT-LINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVER 413

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I+ A     +M K G  P V T+NTL++   + G+L++       + + G+ P+ +SY +
Sbjct: 414 ITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGS 473

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           I+   C +G I++A   L  M  K V+P   ++N IID Y  CG    AF + + M S G
Sbjct: 474 IVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSG 533

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           V  ++ T+N LI    +   I +A  L   +   G+ PDV +YN LI A C   +   AL
Sbjct: 534 VPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRAL 593

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP----FRIL 547
           +L  EM + GI P   TY  L       G + E E ++ ++    L  D +P    + I+
Sbjct: 594 ELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQM----LDKDVVPCSGIYNIM 649

Query: 548 KKRYRRMKESDKARDIHQK 566
              Y +  E  K   + ++
Sbjct: 650 VDAYAKCGEESKVEALRKE 668



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 165/338 (48%), Gaps = 8/338 (2%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+T+ ++G ++ T+      +  +I   C  G +  A  + ++M  +   PD +T+N L+
Sbjct: 351 LQTLVNSGLLQTTV-----IYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALI 405

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           N L K+  + +A  ++ EM +   +P+  T+N  I  Y R  +L+K   + S M   G++
Sbjct: 406 NGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLK 465

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           PN V++  +V+A CK G + +AV  L ++   D             ++D+Y + G   QA
Sbjct: 466 PNVVSYGSIVNAFCKNGKILEAVAILDDMFIKD---VLPGAQVYNAIIDAYIECGSTDQA 522

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
             L   M    +   IV YN+LI G C    IS A      +   G  PDVI+YNTL++ 
Sbjct: 523 FMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISA 582

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
            C +   D A      + K G+ P   +Y+ +   L   G + +       ML+K VVP 
Sbjct: 583 CCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPC 642

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
             I+N+++D Y +CG+ S   ++R  M   G++   +T
Sbjct: 643 SGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVGDYT 680



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 36/243 (14%)

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLL--------------------------------- 390
           PD  ++   +Q   + GD+ +A   L                                  
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209

Query: 391 ---SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M EK+VVP    +N +IDG+ + GDL + F +   ML  G+  NV T+N L+    
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLC 269

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           R G + +  ++  EM    + PD FTY++L       G     L L++E +++G+     
Sbjct: 270 RAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAY 329

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           T + L+ G C  G + +AEEV   +   GL    + +  L   Y ++ + + A  I Q+ 
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389

Query: 568 LLR 570
             R
Sbjct: 390 KSR 392


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 245/487 (50%), Gaps = 20/487 (4%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E LD    M +T     T   +      ++  LC  G+I  A+ L  +M++ G  P  
Sbjct: 165 VSEALDFFHQMFET-----TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPS-PNCATYNAFITGYCRVNELDKALHLFS 212
           +T+  +V+ +CK GD   A +++R+M E+    PN   Y+A I   C+      A +LF+
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M   GI P+  T+N ++   C  G   DA + L E+L   + K + DV+T   L++++ 
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML---ERKISPDVVTYNALINAFV 336

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G  F+A  L+++M  + I  + + Y+ +I+GFC    + +A   F  M  +G  P++I
Sbjct: 337 KEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLI 396

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           T+NTL++  C   ++D+       +++TG+  D  +Y T+I G  + GD+  A + L  M
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI--------RDLMLSF---GVSSNVFTFNA 441
           +   + P+    + ++DG    G L +A  +        +DL  S    GV  +V T+N 
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI      G   +A  L +EM   GI PD  TY+ +I   C    +  A Q++D M  + 
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
            +P+++T+T LI G+C  G + +  E+F ++   G+  + I +  L   +R++   + A 
Sbjct: 577 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGAL 636

Query: 562 DIHQKWL 568
           DI Q+ +
Sbjct: 637 DIFQEMI 643



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 223/462 (48%), Gaps = 15/462 (3%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D      ++  LC+  ++  AL    +M +    P+V+T   L+N LC+ G + +A 
Sbjct: 145 LHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN-NGIRPNRVTHNILVHA 232
            ++  M E    P   TY   + G C+  +   AL+L   M   + I PN V ++ ++ +
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LCK G   DA     E+    +     D+ T   ++  +  +G    A  L  +M ++ I
Sbjct: 265 LCKDGRHSDAQNLFTEM---QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D+V YN LIN F   G    A   + +ML RG +P+ ITY+++++  CKQ +LD A H
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            + +++  G +P+ I++ T+I G C    I    E L  M E  +V +   +N +I G+ 
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML--------- 463
             GDL+ A  +   M+S G+  ++ T + L+      G + DA  + K M          
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501

Query: 464 --LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
              +G+ PDV TYN+LI    N G    A +LY+EM  RGI PD ITY+ +I G C +  
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           + EA ++F  + +   + + + F  L   Y +    D   ++
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 603



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 213/424 (50%), Gaps = 14/424 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  LC  G+   A  L  +M +KG  PD+ T+N ++   C  G    A+ +++EM 
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E + SP+  TYNA I  + +  +  +A  L+  M   GI PN +T++ ++   CK+  L 
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL- 376

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA + +  ++A      + ++IT   L+D Y         + L ++M +  +  D   YN
Sbjct: 377 DAAEHMFYLMATK--GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+GF L GD+++A     +M+  G  PD++T +TLL+ LC  GKL +A   + V+ K+
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494

Query: 361 -----------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
                      GV PD  +Y  +I GL   G  ++A E    M  + +VP+   ++ +ID
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  +   L  A  + D M S   S NV TF  LI    + G + D   L  EM   GI  
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +  TY  LI     +G+I+ AL ++ EM+  G+ PD IT   ++ G  ++  +K A  + 
Sbjct: 615 NAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674

Query: 530 AKIQ 533
            K+Q
Sbjct: 675 EKLQ 678



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 195/398 (48%), Gaps = 4/398 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            + L +KM +K    D+ + N L+   C    L  A     +++++   P+  T+   + 
Sbjct: 98  VISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLH 157

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C  + + +AL  F  M     RPN VT   L++ LC++G + +AV  L  ++  +DG 
Sbjct: 158 GLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM--EDGL 215

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSA 315
             + +   TI+ D   K GD   AL L   M +  +I  ++V Y+ +I+  C +G  S A
Sbjct: 216 QPTQITYGTIV-DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA 274

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F +M ++G  PD+ TYN+++   C  G+  +A      + +  ++PD ++Y  +I  
Sbjct: 275 QNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
               G   +A E    ML + ++P    ++ +IDG+ +   L  A  +  LM + G S N
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           + TFN LI        I D   L  EM   G+  D  TYN LI     +G ++ AL L  
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           EM+  G+ PDI+T   L+ G C  G +K+A E+F  +Q
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 190/414 (45%), Gaps = 22/414 (5%)

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           +I  LE A  +  +M   RP P+   +   +    R+   D  + L+  M    IR +  
Sbjct: 56  EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIY 115

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           + NIL+   C    L  A+   G++          DV+T T L+          +AL  +
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITK---LGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           + MF+   + ++V +  L+NG C  G I  A A   +M++ G  P  ITY T+++ +CK+
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 345 G----------KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           G          K++E SH         + P+ + Y  II  LC  G    A+     M E
Sbjct: 233 GDTVSALNLLRKMEEVSH---------IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K + P+   +N +I G+   G  S+A  +   ML   +S +V T+NALI A  + G  F+
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L  EML  GI P+  TY+ +I   C    +  A  ++  M  +G +P++IT+  LI 
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+C    + +  E+  ++   GL  D   +  L   +  + + + A D+ Q+ +
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 165/342 (48%), Gaps = 16/342 (4%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   + A+I      GK   A  L  +M+ +G +P+ +T++ +++  CK   L+ A+
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           H+   M+    SPN  T+N  I GYC    +D  + L   M   G+  +  T+N L+H  
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN-- 291
              G L  A+  L E+++        D++T   L+D    NG    AL ++  M QK+  
Sbjct: 441 YLVGDLNAALDLLQEMIS---SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM-QKSKK 496

Query: 292 ----------IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
                     ++ D+  YN+LI+G    G    A   + +M  RG +PD ITY+++++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CKQ +LDEA+  +  +     +P+ +++ T+I G C  G +    E    M  + +V   
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
             +  +I G+ + G+++ A  I   M+S GV  +  T   ++
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 141/292 (48%), Gaps = 34/292 (11%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            ++L+  M +K I+ DI ++N+LI  FC    +  A + F ++ K G  PDV+T+ TLL+
Sbjct: 98  VISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLH 157

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LC + ++ EA  F+  + +T   P+ +++ T++ GLC  G IV+A   L  M+E  + P
Sbjct: 158 GLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +  I+DG  + GD  +A ++                                  L+
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNL----------------------------------LR 243

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           K   +  I P+V  Y+ +I + C  G    A  L+ EM  +GI PD+ TY  +I G C+ 
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           G   +AE++  ++    ++ D + +  L   + +  +  +A +++ + L R 
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 6/164 (3%)

Query: 94  LKENLDRLKTMR------DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           LK+ L+  K M+      D       +E D + +  +I  L   GK   A  L  +M  +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VPD +T++ +++ LCK   L++A  +   M     SPN  T+   I GYC+   +D  
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           L LF  M   GI  N +T+  L+    K G +  A+    E+++
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMIS 644


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 241/471 (51%), Gaps = 19/471 (4%)

Query: 114 LETDYRRHV----AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
            ET  R +V     ++  LC  G+I  A+ L  +M++ G  P  +T+  +V+ +CK GD 
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235

Query: 170 EKADHVIREMSEMRPS-PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
             A +++R+M E+    PN   Y+A I   C+      A +LF+ M   GI P+  T+N 
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++   C  G   DA + L E+L   + K + DV+T   L++++ K G  F+A  L+++M 
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEML---ERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            + I  + + Y+ +I+GFC    + +A   F  M  +G  P++IT+NTL++  C   ++D
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           +       +++TG+  D  +Y T+I G  + GD+  A + L  M+   + P+    + ++
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 409 DGYGRCGDLSNAFSI--------RDLMLSF---GVSSNVFTFNALILAETRGGSIFDAFS 457
           DG    G L +A  +        +DL  S    GV  +V T+N LI      G   +A  
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L +EM   GI PD  TY+ +I   C    +  A Q++D M  +  +P+++T+T LI G+C
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             G + +  E+F ++   G+  + I +  L   +R++   + A DI Q+ +
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 235/500 (47%), Gaps = 52/500 (10%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +RC    D      +I+  C   K+  AL    K+ + G  PDV+T N L++ LC    +
Sbjct: 110 IRC----DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRV 165

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A ++  +M E    PN  T+   + G CR   + +A+ L   M  +G++P ++T+  +
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL------ 283
           V  +CKKG    A+  L ++  ++      +V+  + ++DS  K+G    A  L      
Sbjct: 226 VDGMCKKGDTVSALNLLRKM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 284 ----------------------WND-------MFQKNIQTDIVAYNVLINGFCLNGDISS 314
                                 W+D       M ++ I  D+V YN LIN F   G    
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A   + +ML RG +P+ ITY+++++  CKQ +LD A H + +++  G +P+ I++ T+I 
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C    I    E L  M E  +V +   +N +I G+   GDL+ A  +   M+S G+  
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEML-----------LDGIFPDVFTYNLLIGASCN 483
           ++ T + L+      G + DA  + K M             +G+ PDV TYN+LI    N
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G    A +LY+EM  RGI PD ITY+ +I G C +  + EA ++F  + +   + + + 
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583

Query: 544 FRILKKRYRRMKESDKARDI 563
           F  L   Y +    D   ++
Sbjct: 584 FTTLINGYCKAGRVDDGLEL 603



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 213/424 (50%), Gaps = 14/424 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  LC  G+   A  L  +M +KG  PD+ T+N ++   C  G    A+ +++EM 
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E + SP+  TYNA I  + +  +  +A  L+  M   GI PN +T++ ++   CK+  L 
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL- 376

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA + +  ++A      + ++IT   L+D Y         + L ++M +  +  D   YN
Sbjct: 377 DAAEHMFYLMATK--GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+GF L GD+++A     +M+  G  PD++T +TLL+ LC  GKL +A   + V+ K+
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494

Query: 361 -----------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
                      GV PD  +Y  +I GL   G  ++A E    M  + +VP+   ++ +ID
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  +   L  A  + D M S   S NV TF  LI    + G + D   L  EM   GI  
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +  TY  LI     +G+I+ AL ++ EM+  G+ PD IT   ++ G  ++  +K A  + 
Sbjct: 615 NAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674

Query: 530 AKIQ 533
            K+Q
Sbjct: 675 EKLQ 678



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 197/398 (49%), Gaps = 4/398 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            + L +KM +K    D+ +   L+   C    L  A     +++++   P+  T+N  + 
Sbjct: 98  VISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLH 157

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C  + + +AL+LF  M     RPN VT   L++ LC++G + +AV  L  ++  +DG 
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM--EDGL 215

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSA 315
             + +   TI+ D   K GD   AL L   M +  +I  ++V Y+ +I+  C +G  S A
Sbjct: 216 QPTQITYGTIV-DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA 274

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F +M ++G  PD+ TYN+++   C  G+  +A      + +  ++PD ++Y  +I  
Sbjct: 275 QNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
               G   +A E    ML + ++P    ++ +IDG+ +   L  A  +  LM + G S N
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           + TFN LI        I D   L  EM   G+  D  TYN LI     +G ++ AL L  
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           EM+  G+ PDI+T   L+ G C  G +K+A E+F  +Q
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 189/414 (45%), Gaps = 22/414 (5%)

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           +I  LE A  +  +M   RP P+   +   +    R+   D  + L+  M    IR +  
Sbjct: 56  EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIY 115

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           +  IL+   C    L  A+   G++          DV+T   L+          +AL L+
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKLTKL---GLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           + MF+   + ++V +  L+NG C  G I  A A   +M++ G  P  ITY T+++ +CK+
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 345 G----------KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           G          K++E SH         + P+ + Y  II  LC  G    A+     M E
Sbjct: 233 GDTVSALNLLRKMEEVSH---------IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K + P+   +N +I G+   G  S+A  +   ML   +S +V T+NALI A  + G  F+
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L  EML  GI P+  TY+ +I   C    +  A  ++  M  +G +P++IT+  LI 
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+C    + +  E+  ++   GL  D   +  L   +  + + + A D+ Q+ +
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 165/342 (48%), Gaps = 16/342 (4%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   + A+I      GK   A  L  +M+ +G +P+ +T++ +++  CK   L+ A+
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           H+   M+    SPN  T+N  I GYC    +D  + L   M   G+  +  T+N L+H  
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN-- 291
              G L  A+  L E+++        D++T   L+D    NG    AL ++  M QK+  
Sbjct: 441 YLVGDLNAALDLLQEMIS---SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM-QKSKK 496

Query: 292 ----------IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
                     ++ D+  YN+LI+G    G    A   + +M  RG +PD ITY+++++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CKQ +LDEA+  +  +     +P+ +++ T+I G C  G +    E    M  + +V   
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
             +  +I G+ + G+++ A  I   M+S GV  +  T   ++
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 141/291 (48%), Gaps = 34/291 (11%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            ++L+  M +K I+ DI ++ +LI  FC    +  A + F ++ K G  PDV+T+NTLL+
Sbjct: 98  VISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLH 157

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LC + ++ EA + +  + +T   P+ +++ T++ GLC  G IV+A   L  M+E  + P
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +  I+DG  + GD  +A ++                                  L+
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNL----------------------------------LR 243

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           K   +  I P+V  Y+ +I + C  G    A  L+ EM  +GI PD+ TY  +I G C+ 
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           G   +AE++  ++    ++ D + +  L   + +  +  +A +++ + L R
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 140/342 (40%), Gaps = 73/342 (21%)

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLP-------------------------------- 329
           L +GF     +  A   F  ML+   LP                                
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 330 ---DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI-------- 378
              D+ ++  L+ C C   KL  A   +G L+K G+ PD +++ T++ GLC+        
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 379 ---------------------------HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                                       G IV+A   L  M+E  + P    +  I+DG 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 412 GRCGDLSNAFS-IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            + GD  +A + +R +     +  NV  ++A+I +  + G   DA +L  EM   GIFPD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           +FTYN +I   C+ G    A QL  EML R I+PD++TY  LI      G   EAEE++ 
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           ++   G+  + I +  +   + +    D A   H  +L+  K
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAE--HMFYLMATK 389



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 6/164 (3%)

Query: 94  LKENLDRLKTMR------DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           LK+ L+  K M+      D       +E D + +  +I  L   GK   A  L  +M  +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VPD +T++ +++ LCK   L++A  +   M     SPN  T+   I GYC+   +D  
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           L LF  M   GI  N +T+  L+    K G +  A+    E+++
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMIS 644


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/405 (34%), Positives = 206/405 (50%), Gaps = 3/405 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  LE     +  +IR  C  G+I  A  L  +M+ +G VP V+T+N ++  LCK G +
Sbjct: 264 LRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRV 323

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A  ++  M      P+  +YN  I GY R+  + +A  LF+ +    + P+ VT+N L
Sbjct: 324 SDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTL 383

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LC+ G L  A++   E++         DV T T  +  + K G+   A  L+++M  
Sbjct: 384 IDGLCRLGDLDVAMRLKDEMIKHG---PDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLN 440

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           + +Q D  AY   I G    GD S AF    +ML RGF PD+ITYN  ++ L K G L E
Sbjct: 441 RGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKE 500

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           AS     +   G+ PD ++Y +II    + G + KAR   L ML K + P    + V+I 
Sbjct: 501 ASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIH 560

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
            Y   G L  A      M   GV  NV T+NALI    +   +  A++   EM   GI P
Sbjct: 561 SYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISP 620

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           + +TY +LI  +CNLGH   AL+LY +ML R I PD  T+  L+K
Sbjct: 621 NKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLK 665



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 220/417 (52%), Gaps = 3/417 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++ G  P V+T+N +++  CK G +++A  ++ +M  M  SPN  TYN  + G     E
Sbjct: 193 MVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGE 252

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +++A  L   M   G+  +  T++ L+   C+KG + +A +   E+L+     A   V+T
Sbjct: 253 MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRG---AVPTVVT 309

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              +M    K G    A  L + M  KN+  D+V+YN LI G+   G+I  AF  F ++ 
Sbjct: 310 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 369

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            R   P V+TYNTL++ LC+ G LD A      + K G  PD  ++ T ++G C  G++ 
Sbjct: 370 YRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLP 429

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A+E    ML + + P+   +   I G  + GD S AF +++ ML+ G   ++ T+N  I
Sbjct: 430 MAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFI 489

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G++ +A  L K+ML +G+ PD  TY  +I A    GH+  A  L+ EML +GI 
Sbjct: 490 DGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIF 549

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           P ++TYT LI  +  RG +K A   F ++   G+  + I +  L     ++++ D+A
Sbjct: 550 PSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQA 606



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/438 (31%), Positives = 224/438 (51%), Gaps = 3/438 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V C +      +  ++   C  G +  AL L  +M   G  P+ +T+N LVN L   G++
Sbjct: 194 VECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEM 253

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E+A  +I++M  +    +  TY+  I GYC   ++++A  L   M + G  P  VT+N +
Sbjct: 254 EQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTI 313

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           ++ LCK G + DA K L +V+ + +     D+++   L+  Y + G+  +A  L+ ++  
Sbjct: 314 MYGLCKWGRVSDARKLL-DVMVNKN--LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRY 370

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           +++   +V YN LI+G C  GD+  A     +M+K G  PDV T+ T +   CK G L  
Sbjct: 371 RSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPM 430

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   +  +   G+ PD+ +Y T I G    GD  KA      ML +   P+   +NV ID
Sbjct: 431 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 490

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  + G+L  A  +   ML  G+  +  T+ ++I A    G +  A +L  EML  GIFP
Sbjct: 491 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFP 550

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            V TY +LI +    G + LA+  + EM  +G+ P++ITY  LI G C    M +A   F
Sbjct: 551 SVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFF 610

Query: 530 AKIQTLGLAIDHIPFRIL 547
           A++Q  G++ +   + IL
Sbjct: 611 AEMQAKGISPNKYTYTIL 628



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/345 (34%), Positives = 183/345 (53%), Gaps = 3/345 (0%)

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R N +D A  +++ M   GI P  VT+N ++ + CKKG++ +A++ L ++ A   G + +
Sbjct: 179 RDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAM--GCSPN 236

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DV T  +L++    +G+  QA  L  DM +  ++  +  Y+ LI G+C  G I  A    
Sbjct: 237 DV-TYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLG 295

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +ML RG +P V+TYNT++  LCK G++ +A     V+    + PD +SY T+I G    
Sbjct: 296 EEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRL 355

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G+I +A      +  +S+ P    +N +IDG  R GDL  A  ++D M+  G   +VFTF
Sbjct: 356 GNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTF 415

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
              +    + G++  A  L  EML  G+ PD F Y   I     LG    A  + +EML 
Sbjct: 416 TTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLA 475

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           RG  PD+ITY   I G    GN+KEA E+  K+   GL  DH+ +
Sbjct: 476 RGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 520



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 192/405 (47%), Gaps = 52/405 (12%)

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST---------- 265
             G + + +++++++  L + GL+  A   + +V++        DV++S+          
Sbjct: 74  QTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLI 133

Query: 266 --ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC-LNGDISSAFAYFCQM 322
             +L+  Y K     + L ++  M  K +  D+   N ++      + +I  A   +  M
Sbjct: 134 LDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVM 193

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           ++ G  P V+TYNT+L+  CK+G + EA      +   G +P+ ++Y  ++ GL   G++
Sbjct: 194 VECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEM 253

Query: 383 VKAREFLL-----------------------------------SMLEKSVVPEPHIWNVI 407
            +A+E +                                     ML +  VP    +N I
Sbjct: 254 EQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTI 313

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           + G  + G +S+A  + D+M++  +  ++ ++N LI   TR G+I +AF L  E+    +
Sbjct: 314 MYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSL 373

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            P V TYN LI   C LG + +A++L DEM++ G  PD+ T+T  ++G C  GN+  A+E
Sbjct: 374 APSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKE 433

Query: 528 VFAKIQTLGLAIDHIPF--RILKKRYRRMKESDKARDIHQKWLLR 570
           +F ++   GL  D   +  RI+ +   ++ +  KA  + ++ L R
Sbjct: 434 LFDEMLNRGLQPDRFAYITRIVGE--LKLGDPSKAFGMQEEMLAR 476



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 130/289 (44%), Gaps = 38/289 (13%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM--- 179
            +I  LC  G +  A+ L+ +MI+ G  PDV T    V   CK+G+L  A  +  EM   
Sbjct: 382 TLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNR 441

Query: 180 --------------SEMR---PS---------------PNCATYNAFITGYCRVNELDKA 207
                          E++   PS               P+  TYN FI G  ++  L +A
Sbjct: 442 GLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEA 501

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M  NG+ P+ VT+  ++HA    G L  A     E+L+         V+T T+L
Sbjct: 502 SELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKG---IFPSVVTYTVL 558

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           + SY   G    A+  + +M +K +  +++ YN LING C    +  A+ +F +M  +G 
Sbjct: 559 IHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGI 618

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            P+  TY  L+N  C  G   EA   Y  +    + PD  +++++++ L
Sbjct: 619 SPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHL 667



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 3/227 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G    A  ++ +M+ +G  PD++T+N  ++ L K+G+L++A  ++++M      P+  TY
Sbjct: 461 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 520

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
            + I  +     L KA  LF  M + GI P+ VT+ +L+H+   +G L  A+    E+  
Sbjct: 521 TSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEM-- 578

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     +VIT   L++   K     QA   + +M  K I  +   Y +LIN  C  G 
Sbjct: 579 -HEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGH 637

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
              A   +  ML R   PD  T+ +LL  L K  KL    H   V++
Sbjct: 638 WQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHLENVIA 684



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 5/157 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           LKE  + +K M   G     L  D+  + ++I    + G +  A  L  +M+ KG  P V
Sbjct: 498 LKEASELVKKMLYNG-----LVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSV 552

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+  L++     G L+ A     EM E    PN  TYNA I G C+V ++D+A + F+ 
Sbjct: 553 VTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAE 612

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           M   GI PN+ T+ IL++  C  G   +A++   ++L
Sbjct: 613 MQAKGISPNKYTYTILINENCNLGHWQEALRLYKDML 649



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 1/131 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I    + G++  A+    +M +KG  P+V+T+N L+N LCK+  +++A +   EM 
Sbjct: 555 YTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQ 614

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               SPN  TY   I   C +    +AL L+  M +  I+P+  TH  L+  L K   L 
Sbjct: 615 AKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKL- 673

Query: 241 DAVKFLGEVLA 251
             V+ L  V+A
Sbjct: 674 HVVRHLENVIA 684


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 241/471 (51%), Gaps = 19/471 (4%)

Query: 114 LETDYRRHV----AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
            ET  R +V     ++  LC  G+I  A+ L  +M++ G  P  +T+  +V+ +CK GD 
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235

Query: 170 EKADHVIREMSEMRPS-PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
             A +++R+M E+    PN   Y+A I   C+      A +LF+ M   GI P+  T+N 
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++   C  G   DA + L E+L   + K + DV+T   L++++ K G  F+A  L+++M 
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEML---ERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            + I  + + Y+ +I+GFC    + +A   F  M  +G  P++IT+NTL++  C   ++D
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           +       +++TG+  D  +Y T+I G  + GD+  A + L  M+   + P+    + ++
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 409 DGYGRCGDLSNAF--------SIRDLMLSF---GVSSNVFTFNALILAETRGGSIFDAFS 457
           DG    G L +A         S +DL  S    GV  +V T+N LI      G   +A  
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L +EM   GI PD  TY+ +I   C    +  A Q++D M  +  +P+++T+T LI G+C
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             G + +  E+F ++   G+  + I +  L   +R++   + A DI Q+ +
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 235/500 (47%), Gaps = 52/500 (10%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +RC    D      +I+  C   K+  AL    K+ + G  PDV+T N L++ LC    +
Sbjct: 110 IRC----DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRV 165

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A ++  +M E    PN  T+   + G CR   + +A+ L   M  +G++P ++T+  +
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL------ 283
           V  +CKKG    A+  L ++  ++      +V+  + ++DS  K+G    A  L      
Sbjct: 226 VDGMCKKGDTVSALNLLRKM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 284 ----------------------WND-------MFQKNIQTDIVAYNVLINGFCLNGDISS 314
                                 W+D       M ++ I  D+V YN LIN F   G    
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A   + +ML RG +P+ ITY+++++  CKQ +LD A H + +++  G +P+ I++ T+I 
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C    I    E L  M E  +V +   +N +I G+   GDL+ A  +   M+S G+  
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEML-----------LDGIFPDVFTYNLLIGASCN 483
           ++ T + L+      G + DA  + K M             +G+ PDV TYN+LI    N
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G    A +LY+EM  RGI PD ITY+ +I G C +  + EA ++F  + +   + + + 
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583

Query: 544 FRILKKRYRRMKESDKARDI 563
           F  L   Y +    D   ++
Sbjct: 584 FTTLINGYCKAGRVDDGLEL 603



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 213/424 (50%), Gaps = 14/424 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  LC  G+   A  L  +M +KG  PD+ T+N ++   C  G    A+ +++EM 
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E + SP+  TYNA I  + +  +  +A  L+  M   GI PN +T++ ++   CK+  L 
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL- 376

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA + +  ++A      + ++IT   L+D Y         + L ++M +  +  D   YN
Sbjct: 377 DAAEHMFYLMATK--GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+GF L GD+++A     +M+  G  PD++T +TLL+ LC  GKL +A   + V+ K+
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494

Query: 361 -----------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
                      GV PD  +Y  +I GL   G  ++A E    M  + +VP+   ++ +ID
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  +   L  A  + D M S   S NV TF  LI    + G + D   L  EM   GI  
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +  TY  LI     +G+I+ AL ++ EM+  G+ PD IT   ++ G  ++  +K A  + 
Sbjct: 615 NAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674

Query: 530 AKIQ 533
            K+Q
Sbjct: 675 EKLQ 678



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 197/398 (49%), Gaps = 4/398 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            + L +KM +K    D+ +   L+   C    L  A     +++++   P+  T+N  + 
Sbjct: 98  VISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLH 157

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C  + + +AL+LF  M     RPN VT   L++ LC++G + +AV  L  ++  +DG 
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM--EDGL 215

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSA 315
             + +   TI+ D   K GD   AL L   M +  +I  ++V Y+ +I+  C +G  S A
Sbjct: 216 QPTQITYGTIV-DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA 274

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F +M ++G  PD+ TYN+++   C  G+  +A      + +  ++PD ++Y  +I  
Sbjct: 275 QNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
               G   +A E    ML + ++P    ++ +IDG+ +   L  A  +  LM + G S N
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           + TFN LI        I D   L  EM   G+  D  TYN LI     +G ++ AL L  
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           EM+  G+ PDI+T   L+ G C  G +K+A E+F  +Q
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 189/414 (45%), Gaps = 22/414 (5%)

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           +I  LE A  +  +M   RP P+   +   +    R+   D  + L+  M    IR +  
Sbjct: 56  EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIY 115

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           +  IL+   C    L  A+   G++          DV+T   L+          +AL L+
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKL---GLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           + MF+   + ++V +  L+NG C  G I  A A   +M++ G  P  ITY T+++ +CK+
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 345 G----------KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           G          K++E SH         + P+ + Y  II  LC  G    A+     M E
Sbjct: 233 GDTVSALNLLRKMEEVSH---------IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K + P+   +N +I G+   G  S+A  +   ML   +S +V T+NALI A  + G  F+
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L  EML  GI P+  TY+ +I   C    +  A  ++  M  +G +P++IT+  LI 
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+C    + +  E+  ++   GL  D   +  L   +  + + + A D+ Q+ +
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 165/342 (48%), Gaps = 16/342 (4%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   + A+I      GK   A  L  +M+ +G +P+ +T++ +++  CK   L+ A+
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           H+   M+    SPN  T+N  I GYC    +D  + L   M   G+  +  T+N L+H  
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN-- 291
              G L  A+  L E+++        D++T   L+D    NG    AL ++  M QK+  
Sbjct: 441 YLVGDLNAALDLLQEMIS---SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM-QKSKK 496

Query: 292 ----------IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
                     ++ D+  YN+LI+G    G    A   + +M  RG +PD ITY+++++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CKQ +LDEA+  +  +     +P+ +++ T+I G C  G +    E    M  + +V   
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
             +  +I G+ + G+++ A  I   M+S GV  +  T   ++
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 141/291 (48%), Gaps = 34/291 (11%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            ++L+  M +K I+ DI ++ +LI  FC    +  A + F ++ K G  PDV+T+NTLL+
Sbjct: 98  VISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLH 157

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LC + ++ EA + +  + +T   P+ +++ T++ GLC  G IV+A   L  M+E  + P
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +  I+DG  + GD  +A ++                                  L+
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNL----------------------------------LR 243

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           K   +  I P+V  Y+ +I + C  G    A  L+ EM  +GI PD+ TY  +I G C+ 
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           G   +AE++  ++    ++ D + +  L   + +  +  +A +++ + L R
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 140/342 (40%), Gaps = 73/342 (21%)

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLP-------------------------------- 329
           L +GF     +  A   F  ML+   LP                                
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 330 ---DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI-------- 378
              D+ ++  L+ C C   KL  A   +G ++K G+ PD +++ T++ GLC+        
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 379 ---------------------------HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                                       G IV+A   L  M+E  + P    +  I+DG 
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 412 GRCGDLSNAFS-IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            + GD  +A + +R +     +  NV  ++A+I +  + G   DA +L  EM   GIFPD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           +FTYN +I   C+ G    A QL  EML R I+PD++TY  LI      G   EAEE++ 
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           ++   G+  + I +  +   + +    D A   H  +L+  K
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAE--HMFYLMATK 389



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 6/164 (3%)

Query: 94  LKENLDRLKTMR------DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           LK+ L+  K M+      D       +E D + +  +I  L   GK   A  L  +M  +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VPD +T++ +++ LCK   L++A  +   M     SPN  T+   I GYC+   +D  
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           L LF  M   GI  N +T+  L+    K G +  A+    E+++
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMIS 644


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 241/471 (51%), Gaps = 19/471 (4%)

Query: 114 LETDYRRHV----AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
            ET  R +V     ++  LC  G+I  A+ L  +M++ G  P  +T+  +V+ +CK GD 
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235

Query: 170 EKADHVIREMSEMRPS-PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
             A +++R+M E+    PN   Y+A I   C+      A +LF+ M   GI P+  T+N 
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++   C  G   DA + L E+L   + K + DV+T   L++++ K G  F+A  L+++M 
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEML---ERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            + I  + + Y+ +I+GFC    + +A   F  M  +G  P++IT+NTL++  C   ++D
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           +       +++TG+  D  +Y T+I G  + GD+  A + L  M+   + P+    + ++
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 409 DGYGRCGDLSNAF--------SIRDLMLSF---GVSSNVFTFNALILAETRGGSIFDAFS 457
           DG    G L +A         S +DL  S    GV  +V T+N LI      G   +A  
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L +EM   GI PD  TY+ +I   C    +  A Q++D M  +  +P+++T+T LI G+C
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             G + +  E+F ++   G+  + I +  L   +R++   + A DI Q+ +
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 224/462 (48%), Gaps = 15/462 (3%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D      ++  LC+  ++  AL L  +M +    P+V+T   L+N LC+ G + +A 
Sbjct: 145 LHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN-NGIRPNRVTHNILVHA 232
            ++  M E    P   TY   + G C+  +   AL+L   M   + I PN V ++ ++ +
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LCK G   DA     E+    +     D+ T   ++  +  +G    A  L  +M ++ I
Sbjct: 265 LCKDGRHSDAQNLFTEM---QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKI 321

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D+V YN LIN F   G    A   + +ML RG +P+ ITY+++++  CKQ +LD A H
Sbjct: 322 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            + +++  G +P+ I++ T+I G C    I    E L  M E  +V +   +N +I G+ 
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY 441

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML--------- 463
             GDL+ A  +   M+S G+  ++ T + L+      G + DA  + K M          
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501

Query: 464 --LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
              +G+ PDV TYN+LI    N G    A +LY+EM  RGI PD ITY+ +I G C +  
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           + EA ++F  + +   + + + F  L   Y +    D   ++
Sbjct: 562 LDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 603



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 213/424 (50%), Gaps = 14/424 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  LC  G+   A  L  +M +KG  PD+ T+N ++   C  G    A+ +++EM 
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E + SP+  TYNA I  + +  +  +A  L+  M   GI PN +T++ ++   CK+  L 
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL- 376

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA + +  ++A      + ++IT   L+D Y         + L ++M +  +  D   YN
Sbjct: 377 DAAEHMFYLMATK--GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+GF L GD+++A     +M+  G  PD++T +TLL+ LC  GKL +A   + V+ K+
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494

Query: 361 -----------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
                      GV PD  +Y  +I GL   G  ++A E    M  + +VP+   ++ +ID
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  +   L  A  + D M S   S NV TF  LI    + G + D   L  EM   GI  
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +  TY  LI     +G+I+ AL ++ EM+  G+ PD IT   ++ G  ++  +K A  + 
Sbjct: 615 NAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674

Query: 530 AKIQ 533
            K+Q
Sbjct: 675 EKLQ 678



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 197/398 (49%), Gaps = 4/398 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            + L +KM +K    D+ + N L+   C    L  A     +++++   P+  T+   + 
Sbjct: 98  VISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLH 157

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C  + + +AL+LF  M     RPN VT   L++ LC++G + +AV  L  ++  +DG 
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMM--EDGL 215

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSA 315
             + +   TI+ D   K GD   AL L   M +  +I  ++V Y+ +I+  C +G  S A
Sbjct: 216 QPTQITYGTIV-DGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA 274

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F +M ++G  PD+ TYN+++   C  G+  +A      + +  ++PD ++Y  +I  
Sbjct: 275 QNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINA 334

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
               G   +A E    ML + ++P    ++ +IDG+ +   L  A  +  LM + G S N
Sbjct: 335 FVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           + TFN LI        I D   L  EM   G+  D  TYN LI     +G ++ AL L  
Sbjct: 395 LITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQ 454

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           EM+  G+ PDI+T   L+ G C  G +K+A E+F  +Q
Sbjct: 455 EMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 191/414 (46%), Gaps = 22/414 (5%)

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           +I  LE A  +  +M   RP P+   +   +    R+   D  + L+  M    IR +  
Sbjct: 56  EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIY 115

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           + NIL+   C    L  A+   G++          DV+T T L+          +AL L+
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKL---GLHPDVVTFTTLLHGLCVEDRVSEALNLF 172

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           + MF+   + ++V +  L+NG C  G I  A A   +M++ G  P  ITY T+++ +CK+
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 345 G----------KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           G          K++E SH         + P+ + Y  II  LC  G    A+     M E
Sbjct: 233 GDTVSALNLLRKMEEVSH---------IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K + P+   +N +I G+   G  S+A  +   ML   +S +V T+NALI A  + G  F+
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L  EML  GI P+  TY+ +I   C    +  A  ++  M  +G +P++IT+  LI 
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+C    + +  E+  ++   GL  D   +  L   +  + + + A D+ Q+ +
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 165/342 (48%), Gaps = 16/342 (4%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   + A+I      GK   A  L  +M+ +G +P+ +T++ +++  CK   L+ A+
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           H+   M+    SPN  T+N  I GYC    +D  + L   M   G+  +  T+N L+H  
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN-- 291
              G L  A+  L E+++        D++T   L+D    NG    AL ++  M QK+  
Sbjct: 441 YLVGDLNAALDLLQEMIS---SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM-QKSKK 496

Query: 292 ----------IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
                     ++ D+  YN+LI+G    G    A   + +M  RG +PD ITY+++++ L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CKQ +LDEA+  +  +     +P+ +++ T+I G C  G +    E    M  + +V   
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 616

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
             +  +I G+ + G+++ A  I   M+S GV  +  T   ++
Sbjct: 617 ITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 141/291 (48%), Gaps = 34/291 (11%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            ++L+  M +K I+ DI ++N+LI  FC    +  A + F ++ K G  PDV+T+ TLL+
Sbjct: 98  VISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLH 157

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LC + ++ EA + +  + +T   P+ +++ T++ GLC  G IV+A   L  M+E  + P
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQP 217

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +  I+DG  + GD  +A ++                                  L+
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNL----------------------------------LR 243

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           K   +  I P+V  Y+ +I + C  G    A  L+ EM  +GI PD+ TY  +I G C+ 
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           G   +AE++  ++    ++ D + +  L   + +  +  +A +++ + L R
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 6/164 (3%)

Query: 94  LKENLDRLKTMR------DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           LK+ L+  K M+      D       +E D + +  +I  L   GK   A  L  +M  +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VPD +T++ +++ LCK   L++A  +   M     SPN  T+   I GYC+   +D  
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           L LF  M   GI  N +T+  L+    K G +  A+    E+++
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMIS 644


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 215/402 (53%), Gaps = 3/402 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           +   A+ L  +M+ KG  PD++T+  +VN LCK GD++ A  ++++M + +  P    YN
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I   C    ++ AL+LF+ M N GIRPN VT+N L+  LC  G   DA + L +++  
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI-- 318

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
            + K   +V+T + L+D++ K G   +A  L+++M +++I  DI  Y+ LINGFC++  +
Sbjct: 319 -ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A   F  M+ +   P+V+TYNTL+   CK  ++DE    +  +S+ G+  + ++Y T+
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I G     +   A+     M+   V+P+   +++++DG    G +  A  + + +    +
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +++T+N +I    + G + D + L   + L G+ P+V TY  ++   C  G    A  
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           L+ EM   G  PD  TY  LI+ H   G+   + E+  ++++
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 219/437 (50%), Gaps = 3/437 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C   ++  AL +  KM++ G  PD++T N L+N  C    +  A  ++ +M EM 
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T+N  I G  R N   +A+ L   M   G +P+ VT+ I+V+ LCK+G +  A+
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++   + GK    V+    ++D+     +   AL L+ +M  K I+ ++V YN LI
Sbjct: 242 SLLKKM---EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
              C  G  S A      M++R   P+V+T++ L++   K+GKL EA   Y  + K  + 
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y ++I G C+H  + +A+     M+ K   P    +N +I G+ +   +     +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+  N  T+  LI    +     +A  + K+M+ DG+ PD+ TY++L+   CN
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  AL +++ + R  + PDI TY  +I+G C  G +++  ++F  +   G+  + + 
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538

Query: 544 FRILKKRYRRMKESDKA 560
           +  +   + R    ++A
Sbjct: 539 YTTMMSGFCRKGLKEEA 555



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 222/445 (49%), Gaps = 12/445 (2%)

Query: 104 MRDTGPVRCTLETDYRR-HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNE 162
           +RD   VR     DYR+  +  + DL    K+  A+ L   M++    P ++  + L++ 
Sbjct: 39  VRDFSGVR----YDYRKISINRLNDL----KLDDAVNLFGDMVKSRPFPSIVEFSKLLSA 90

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           + K+   +    +  +M  +  S N  TY+  I  +CR ++L  AL + + M   G  P+
Sbjct: 91  IAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPD 150

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
            VT N L++  C    + DAV  +G+++   +     D  T   L+   F++    +A+A
Sbjct: 151 IVTLNSLLNGFCHGNRISDAVSLVGQMV---EMGYQPDSFTFNTLIHGLFRHNRASEAVA 207

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           L + M  K  Q D+V Y +++NG C  GDI  A +   +M +    P V+ YNT+++ LC
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
               +++A + +  +   G+ P+ ++Y ++I+ LC +G    A   L  M+E+ + P   
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            ++ +ID + + G L  A  + D M+   +  ++FT+++LI        + +A  + + M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           +    FP+V TYN LI   C    +   ++L+ EM +RG+  + +TYT LI G       
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRIL 547
             A+ VF ++ + G+  D + + IL
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSIL 472



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 192/407 (47%), Gaps = 42/407 (10%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           L+ A ++  +M + RP P+   ++  ++   ++N+ D  + L   M N GI  N  T++I
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L++  C++  L                                        ALA+   M 
Sbjct: 122 LINCFCRRSQLS--------------------------------------LALAVLAKMM 143

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           +   + DIV  N L+NGFC    IS A +   QM++ G+ PD  T+NTL++ L +  +  
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA      +   G  PD ++Y  ++ GLC  GDI  A   L  M +  + P   I+N II
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           D      ++++A ++   M + G+  NV T+N+LI      G   DA  L  +M+   I 
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P+V T++ LI A    G +  A +LYDEM++R I PDI TY+ LI G C    + EA+ +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRN 571
           F  + +     + + +  L K + + K  D+     R++ Q+ L+ N
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 144/314 (45%), Gaps = 42/314 (13%)

Query: 82  NPQAV-FNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
           NP  V F+AL D  +KE  L   + + D   ++ +++ D   + ++I   C+  ++  A 
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            +   MI K   P+V+T+N L+   CK   +++   + REMS+     N  TY   I G+
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            +  E D A  +F  M ++G+ P+ +T++IL+  LC                        
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC------------------------ 477

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
                          NG    AL ++  + +  ++ DI  YN++I G C  G +   +  
Sbjct: 478 --------------NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           FC +  +G  P+V+TY T+++  C++G  +EA   +  + + G  PD  +Y T+I+    
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583

Query: 379 HGDIVKAREFLLSM 392
            GD   + E +  M
Sbjct: 584 DGDKAASAELIREM 597


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 222/433 (51%), Gaps = 3/433 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D      +I  LCL  K+  A+ L  +M++ G  P+V+T+N +VN +CK GD   A  
Sbjct: 132 EPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALD 191

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++R+M E     +  TY+  I   CR   +D A+ LF  M   GI+ + VT+N LV  LC
Sbjct: 192 LLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLC 251

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K G   D V+ L ++ +    K   +VIT  +L+D + K G   +A  L+ +M  K I  
Sbjct: 252 KAGKWNDGVQLLKDMTSR---KIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISP 308

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           + + YN L++G+C+   +S A      M++    PD++T+ +L+   CK  ++DE    +
Sbjct: 309 NTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLF 368

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +SK G+  + ++Y  ++QG C  G +  A E    M+   V+P+   + +++DG    
Sbjct: 369 RKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDN 428

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G L  A  I + +    ++ ++  +  +I    +GG + DA++L   +   G+ P+V TY
Sbjct: 429 GKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 488

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
            ++I   C  G +  A  L  +M   G  P+  TY  LI+ H   G++  + ++  ++++
Sbjct: 489 TVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 548

Query: 535 LGLAIDHIPFRIL 547
            G + D    +++
Sbjct: 549 CGFSADASSIKMV 561



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 215/406 (52%), Gaps = 3/406 (0%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           +KM   G   ++ T N ++N  C+      A  V+ ++ ++   P+  T+N  I G C  
Sbjct: 89  KKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLE 148

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
           +++ +A+ L + M  NG +PN VT+N +V+ +CK G    A+  L ++   D+    +DV
Sbjct: 149 SKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKM---DERNVKADV 205

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
            T + ++DS  ++G    A++L+ +M  K I++ +V YN L+ G C  G  +        
Sbjct: 206 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKD 265

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M  R  +P+VIT+N L++   K+GKL EA+  Y  +   G++P+ I+Y +++ G C+   
Sbjct: 266 MTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNR 325

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + +A   L  M+  +  P+   +  +I GY +   +     +   +   G+ +N  T++ 
Sbjct: 326 LSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSI 385

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           L+    + G +  A  L +EM+  G+ PDV TY +L+   C+ G +  AL++++++ +  
Sbjct: 386 LVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 445

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +  DI+ YT +I+G C  G +++A  +F  +   G+  + + + ++
Sbjct: 446 MNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 491



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 182/365 (49%), Gaps = 3/365 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I  LC  G I  A+ L ++M  KG    ++T+N LV  LCK G      
Sbjct: 201 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGV 260

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++++M+  +  PN  T+N  I  + +  +L +A  L+  M   GI PN +T+N L+   
Sbjct: 261 QLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGY 320

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C +  L +A   L  ++ ++    + D++T T L+  Y K     + + L+  + ++ + 
Sbjct: 321 CMQNRLSEANNMLDLMVRNN---CSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLV 377

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            + V Y++L+ GFC +G +  A   F +M+  G LPDV+TY  LL+ LC  GKL++A   
Sbjct: 378 ANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEI 437

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  L K+ +  D + Y  II+G+C  G +  A     S+  K V P    + V+I G  +
Sbjct: 438 FEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 497

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G LS A  +   M   G   N  T+N LI A  R G +  +  L +EM   G   D  +
Sbjct: 498 KGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 557

Query: 474 YNLLI 478
             ++I
Sbjct: 558 IKMVI 562



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 179/405 (44%), Gaps = 40/405 (9%)

Query: 166 IGDLEKADHV--IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           I D+++ D +   +EM   RP P+   ++ F +G     + +  L     M  NGI  N 
Sbjct: 41  IVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNI 100

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
            T NI+++  C+      A   LG+V+                                 
Sbjct: 101 YTLNIMINCFCRCCKTCFAYSVLGKVM--------------------------------- 127

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
                +   + D   +N LING CL   +S A     +M++ G  P+V+TYN+++N +CK
Sbjct: 128 -----KLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICK 182

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G    A      + +  V  D  +Y TII  LC  G I  A      M  K +      
Sbjct: 183 SGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVT 242

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N ++ G  + G  ++   +   M S  +  NV TFN LI    + G + +A  L KEM+
Sbjct: 243 YNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMI 302

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             GI P+  TYN L+   C    +  A  + D M+R   +PDI+T+T LIKG+C    + 
Sbjct: 303 TKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVD 362

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           E  ++F KI   GL  + + + IL + + +  + + A ++ Q+ +
Sbjct: 363 EGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMV 407



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 32/277 (11%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A  L ++MI KG  P+ +T+N L++  C    L +A++++  M     SP+  T+
Sbjct: 289 GKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTF 348

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE--- 248
            + I GYC+V  +D+ + LF  ++  G+  N VT++ILV   C+ G L  A +   E   
Sbjct: 349 TSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVS 408

Query: 249 --VLAD------------DDGKATS---------------DVITSTILMDSYFKNGDKFQ 279
             VL D            D+GK                  D++  TI+++   K G    
Sbjct: 409 LGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVED 468

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  L+  +  K ++ +++ Y V+I+G C  G +S A     +M + G  P+  TYNTL+ 
Sbjct: 469 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIR 528

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
              + G L  ++     +   G + D  S K +I  L
Sbjct: 529 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/291 (20%), Positives = 121/291 (41%), Gaps = 35/291 (12%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A+ L+ +M +      +V ++   +G       +    +  +M   G   ++ T N ++N
Sbjct: 49  AIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMIN 108

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           C C+  K   A    G + K G  PD  ++ T+I GLC+   +                 
Sbjct: 109 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKV----------------- 151

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
                             S A  +   M+  G   NV T+N+++    + G    A  L 
Sbjct: 152 ------------------SEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLL 193

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           ++M    +  DVFTY+ +I + C  G I  A+ L+ EM  +GI   ++TY  L+ G C  
Sbjct: 194 RKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKA 253

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           G   +  ++   + +  +  + I F +L   + +  +  +A +++++ + +
Sbjct: 254 GKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITK 304



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 59/117 (50%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  +C GGK+  A  L   +  KG  P+V+T+  +++ LCK G L +A+ ++
Sbjct: 449 DIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 508

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           R+M E    PN  TYN  I  + R  +L  +  L   M + G   +  +  +++  L
Sbjct: 509 RKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565



 Score = 45.1 bits (105), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 53/112 (47%)

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           K+M L+GI  +++T N++I   C       A  +  ++++ G  PD  T+  LI G C  
Sbjct: 89  KKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLE 148

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             + EA  + A++   G   + + +  +     +  ++  A D+ +K   RN
Sbjct: 149 SKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERN 200


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 232/471 (49%), Gaps = 39/471 (8%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E  + ++++RD G +R  +  D      +I  LC  G+I  A  +   MI  G VP+V+T
Sbjct: 341 EACELMRSLRD-GSLR--VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVIT 397

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +N LVN LCK   +E+A  +I  M +   +P+  TY+  +  +C+ + +D+AL L   MA
Sbjct: 398 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 457

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           + G  PN VT N ++  LCK    G+A +   + +A   G    D IT   L+D  F+ G
Sbjct: 458 SRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDD-MALKHG-LVPDKITYCTLIDGLFRTG 515

Query: 276 -------------------------------DKFQALALWNDMFQKNIQTDIVAYNVLIN 304
                                          D  +AL ++N M +  +  D V +N+LI 
Sbjct: 516 RAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIA 575

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G+   A A F +M+ +   PDV+T+  L++ LCK G+++ A     ++   GV P
Sbjct: 576 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 635

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           + ++Y  ++ GLC  G I +A +FL  M+    VP+   +  ++    R     +A  + 
Sbjct: 636 NVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLV 695

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
             + SFG   +  T+N L+    + G    A ++ +EM+  G  PDV TYN LI + C  
Sbjct: 696 SELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKA 755

Query: 485 GHIHLALQLYDEM---LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           G +  A +L+ +M   + R   P+++TY+ LI G C  G + EA E+  ++
Sbjct: 756 GDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEM 806



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 229/449 (51%), Gaps = 14/449 (3%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  AL +  +M++   VPD +T N L+   CK G+ E+A  +  EM      P+  T+
Sbjct: 546 GDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTF 605

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
            A I G C+  +++ A  +   M N G+ PN VT+N LVH LCK G + +A +FL E+++
Sbjct: 606 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVS 665

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   D IT   L+ +  +      AL L +++       D V YN+L++G   +G 
Sbjct: 666 S---GCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQ 722

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT---GVAPDQIS 368
              A     +M+ +G  PDV+TYNTL++ LCK G L+EA   +G +S        P+ ++
Sbjct: 723 TEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVT 782

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKS--VVPEPHIWNVIIDGYGRCGDLSNAF----S 422
           Y  +I GLC  G I +ARE +  M+ KS  V+P    +N  +DG  +   ++ A     S
Sbjct: 783 YSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRS 842

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +RD   S  VS +  TF+ LI    + G   +A ++  +M+  G  P+V TYN+L+   C
Sbjct: 843 LRDG--SLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLC 900

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               +  A  + + M+ +G+TPD+ITY+ L+   C   ++ EA E+   + + G   + +
Sbjct: 901 KTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVV 960

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLRN 571
            F  +     +  +S +A  +     L++
Sbjct: 961 TFNSIIDGLCKSDQSGEAFQMFDDMTLKH 989



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 216/445 (48%), Gaps = 11/445 (2%)

Query: 124 VIRDLCLGGKIGTALWL-RRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           V++ LC  G+   AL + R +M + G  P ++T+N ++N LCK  +L     +  E+ E 
Sbjct: 186 VLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVER 245

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  I   C+  +L++A  L   M++    PN VT+++L++ LCK G + +A
Sbjct: 246 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEA 305

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT--DIVAYN 300
            + + E +         ++IT    +D   K     +A  L   +   +++   D V ++
Sbjct: 306 RELIQE-MTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFS 364

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G C  G I  A + F  M+  G++P+VITYN L+N LCK  K++ A      +   
Sbjct: 365 TLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDK 424

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GV PD I+Y  ++   C    + +A E L  M  +   P    +N IIDG  +      A
Sbjct: 425 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEA 484

Query: 421 FSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF-PDVFTYNLLI 478
           F +  D+ L  G+  +  T+  LI    R G    A     E LLD +  PD + +N  I
Sbjct: 485 FQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQA-----EALLDAMPDPDTYAFNCCI 539

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
                LG +  ALQ+Y+ ML   + PD +T+  LI G C  GN ++A  +F ++    L 
Sbjct: 540 NGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQ 599

Query: 539 IDHIPFRILKKRYRRMKESDKARDI 563
            D + F  L     +  + + ARDI
Sbjct: 600 PDVMTFGALIDGLCKAGQVEAARDI 624



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 233/519 (44%), Gaps = 74/519 (14%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  LC  G +  A  L   M  +  VP+V+T++ L+N LCK+G +++A  +I
Sbjct: 250 DVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELI 309

Query: 177 REMS---------------------------------------EMRPSPNCATYNAFITG 197
           +EM+                                        +R SP+  T++  I G
Sbjct: 310 QEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDG 369

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
            C+  ++D+A  +F  M   G  PN +T+N LV+ LCK   +  A   +  ++   D   
Sbjct: 370 LCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV---DKGV 426

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
           T DVIT ++L+D++ K     +AL L + M  +    ++V +N +I+G C +     AF 
Sbjct: 427 TPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQ 486

Query: 318 YFCQM-LKRGFLPDVITYNTLL---------------------------NC----LCKQG 345
            F  M LK G +PD ITY TL+                           NC    L K G
Sbjct: 487 MFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLG 546

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
            +  A   Y  + +  + PD++++  +I G C  G+  +A      M+ K++ P+   + 
Sbjct: 547 DVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFG 606

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            +IDG  + G +  A  I DLM + GV  NV T+NAL+    + G I +A    +EM+  
Sbjct: 607 ALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSS 666

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G  PD  TY  L+ A C       ALQL  E+   G  PD +TY  L+ G    G  ++A
Sbjct: 667 GCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQA 726

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
             V  ++   G   D + +  L     +  + ++AR +H
Sbjct: 727 ITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLH 765



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 206/405 (50%), Gaps = 16/405 (3%)

Query: 132  GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS----PN 187
            G+   A+ +  +M+ KG  PDV+T+N L++ LCK GDLE+A  +  +MS  R S    PN
Sbjct: 721  GQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSS-RVSRCCVPN 779

Query: 188  CATYNAFITGYCRVNELDKALHLFSTMANNG--IRPNRVTHNILVHALCKKGLLGDAVKF 245
              TY+  I G C+V  +D+A  L   M      + PN +T+N  +  LCK+ ++ +A + 
Sbjct: 780  VVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACEL 839

Query: 246  LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
            +   L D   + + D +T + L+D   K G   +A  +++DM       ++V YNVL+NG
Sbjct: 840  M-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNG 898

Query: 306  FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
             C    +  A A    M+ +G  PDVITY+ L++  CK   +DEA      ++  G  P+
Sbjct: 899  LCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPN 958

Query: 366  QISYKTIIQGLCIHGDIVKAREFLLSM-LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
             +++ +II GLC      +A +    M L+  + P+   +  +IDG  R G    A  + 
Sbjct: 959  VVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLL 1018

Query: 425  DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
            D M       + + FN  I   ++ G +  A     E+ L    PD  T+N+LI  +C  
Sbjct: 1019 DAM----PDPDTYAFNCCINGLSKLGDVSRALHRMLELEL---VPDKVTFNILIAGACKA 1071

Query: 485  GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            G+   A  L++EM+ + + PD++T+  LI G C  G ++   ++ 
Sbjct: 1072 GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 227/481 (47%), Gaps = 47/481 (9%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            A++  LC  G+I  A     +M+  G VPD +T+  LV  LC+    + A  ++ E+   
Sbjct: 642  ALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF 701

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               P+  TYN  + G  +  + ++A+ +   M   G  P+ VT+N L+ +LCK G L +A
Sbjct: 702  GWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEA 761

Query: 243  VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK--NIQTDIVAYN 300
             +  G++ +        +V+T ++L++   K G   +A  L  +M +K  ++  +I+ YN
Sbjct: 762  RRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYN 821

Query: 301  VLINGFCLNGDISSAFAYFCQM---LKRGFL---PDVITYNTLLNCLCKQGKLDEASHFY 354
              ++G C      S  A  C++   L+ G L   PD +T++TL++ LCK G+ DEA + +
Sbjct: 822  SFLDGLCKQ----SMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVF 877

Query: 355  GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
              +   G  P+ ++Y  ++ GLC    + +A   + SM++K V P+   ++V++D + + 
Sbjct: 878  DDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 937

Query: 415  GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM------------ 462
              +  A  +   M S G + NV TFN++I    +     +AF +  +M            
Sbjct: 938  SHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKIT 997

Query: 463  ---LLDGIF-----------------PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
               L+DG+F                 PD + +N  I     LG +  AL     ML   +
Sbjct: 998  YCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALH---RMLELEL 1054

Query: 503  TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             PD +T+  LI G C  GN ++A  +F ++    L  D + F  L     +  + +   D
Sbjct: 1055 VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWD 1114

Query: 563  I 563
            I
Sbjct: 1115 I 1115



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 195/413 (47%), Gaps = 45/413 (10%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           ++N ++    +     KA+ LF +      RPN  T++ L+ A  K G  GD  + LG  
Sbjct: 113 SFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAG--GDVERTLG-- 168

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALW-NDMFQKNIQTDIVAYNVLINGFCL 308
                  ++  V    I++ S  + G+  +AL ++  +M +  +   IV YN +ING C 
Sbjct: 169 FFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCK 228

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           + ++ +    F ++++RG  PDV+TYNTL++ LCK G L+EA   +G +S     P+ ++
Sbjct: 229 SNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVT 288

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKS-------------------------------- 396
           Y  +I GLC  G I +ARE +  M  KS                                
Sbjct: 289 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRS 348

Query: 397 -------VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
                  V P+   ++ +IDG  +CG +  A S+ D M++ G   NV T+NAL+    + 
Sbjct: 349 LRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKA 408

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             +  A ++ + M+  G+ PDV TY++L+ A C    +  AL+L   M  RG TP+++T+
Sbjct: 409 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTF 468

Query: 510 TELIKGHCARGNMKEAEEVFAKIQ-TLGLAIDHIPFRILKKRYRRMKESDKAR 561
             +I G C      EA ++F  +    GL  D I +  L     R   + +A 
Sbjct: 469 NSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAE 521



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 133/342 (38%), Gaps = 74/342 (21%)

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL------------------ 337
           I ++N  +N    +G  + A   F   L     P+  TY+TL                  
Sbjct: 111 IFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFF 170

Query: 338 ----------------LNCLCKQGKLDEASH-FYGVLSKTGVAPDQISYKTIIQGLCIHG 380
                           L  LC+ G+   A   F G +++ GVAP  ++Y TII GLC   
Sbjct: 171 RRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSN 230

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
           ++    E    ++E+   P+   +N +ID   + GDL  A  +   M S     NV T++
Sbjct: 231 ELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYS 290

Query: 441 ALILAETRGGSIFDAFSLKKEM----------------LLDG------------------ 466
            LI    + G I +A  L +EM                 LDG                  
Sbjct: 291 VLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR 350

Query: 467 -----IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
                + PD  T++ LI   C  G I  A  ++D+M+  G  P++ITY  L+ G C    
Sbjct: 351 DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADK 410

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           M+ A  +   +   G+  D I + +L   + +    D+A ++
Sbjct: 411 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 452



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 5/226 (2%)

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           N ++ + F  +   L  GF   + ++N  LN L K G   +A   +         P+  +
Sbjct: 90  NAELGTQFYDWAAALP-GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFT 148

Query: 369 YKTIIQGLC-IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDL 426
           Y T+++      GD+ +   F   +   S       +N+++    R G+ + A  I R  
Sbjct: 149 YSTLLRATYKAGGDVERTLGFFRRIRSSSRSVAD--YNIVLQSLCRAGETARALEIFRGE 206

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M   GV+  + T+N +I    +   +     L +E++  G  PDV TYN LI + C  G 
Sbjct: 207 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 266

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           +  A +L+ +M  R   P+++TY+ LI G C  G + EA E+  ++
Sbjct: 267 LEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEM 312



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 16/217 (7%)

Query: 101  LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
            +++M D G     +  D   +  ++   C    +  AL L   M  +G  P+V+T N ++
Sbjct: 912  IESMVDKG-----VTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSII 966

Query: 161  NELCKIGDLEKADHVIREMS-EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
            + LCK     +A  +  +M+ +   +P+  TY   I G  R     +A  L   M +   
Sbjct: 967  DGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD--- 1023

Query: 220  RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
             P+    N  ++ L K   LGD  + L  +L   + +   D +T  IL+    K G+  Q
Sbjct: 1024 -PDTYAFNCCINGLSK---LGDVSRALHRML---ELELVPDKVTFNILIAGACKAGNFEQ 1076

Query: 280  ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
            A AL+ +M  KN+Q D++ +  LI+G C  G + + +
Sbjct: 1077 ASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATW 1113


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 140/450 (31%), Positives = 236/450 (52%), Gaps = 8/450 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I   C+ GK+  AL L   M+ K   P+V T+N LV+ LCK G +++A  V+  M 
Sbjct: 171 YSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVML 230

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +     N  TY+  + GY  V E+ KA H+F+ M+  G+ P+  ++NI+++  CK   + 
Sbjct: 231 KACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVD 290

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A+    E++          +I    ++DS+ K      A++L + +  K IQ D+   N
Sbjct: 291 KALNLFKEMILS----RFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLN 346

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LIN FC  G I+  F+   ++LKRG+ P  +T NTL+  LC +G++ +A HF+  L   
Sbjct: 347 ILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 406

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G   +Q+SY T+I G+C  GD   A + L  +  +   P   +++ IID   +   +S A
Sbjct: 407 GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 466

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           + +   M   G+S++V T++ LI      G + +A  L  EM+L  I PDV TY +L+ A
Sbjct: 467 YGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDA 526

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
               G +  A  +   ML+  + PD+ TY  L+ G+     +K+A+ VF  +  +G+  D
Sbjct: 527 LGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPD 586

Query: 541 HIPFRILKKRYRRMKESDKA----RDIHQK 566
              + IL   + + K  D+A    +++HQK
Sbjct: 587 VHTYTILINGFCKSKMVDEALNLFKEMHQK 616



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 215/433 (49%), Gaps = 10/433 (2%)

Query: 105 RDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC 164
           R   P   TL T       +I+ LCL G++  AL    K++ +G   + +++  L+N +C
Sbjct: 371 RGYPPSTVTLNT-------LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 423

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           KIGD   A  ++R++      PN   Y+  I   C+   + +A  LFS M   GI  + V
Sbjct: 424 KIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 483

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           T++ L++  C  G L +A+  L E++         DV T TIL+D+  K G   +A ++ 
Sbjct: 484 TYSTLIYGFCIVGKLKEAIGLLNEMVLKT---INPDVRTYTILVDALGKEGKVKEAKSVL 540

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
             M +  ++ D+  YN L+NG+ L  ++  A   F  M   G  PDV TY  L+N  CK 
Sbjct: 541 AVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKS 600

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
             +DEA + +  + +  + PD ++Y +++ GLC  G I    + +  M ++    +   +
Sbjct: 601 KMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITY 660

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           N +IDG  + G L  A ++ + M   G+  N FTF  L+    +GG + DA  + +++L 
Sbjct: 661 NSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLT 720

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            G   DV+ YN++I   C  G +  AL +  +M   G  P+ +T+  +I     +    +
Sbjct: 721 KGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDK 780

Query: 525 AEEVFAKIQTLGL 537
           AE++  ++   GL
Sbjct: 781 AEKLLRQMIARGL 793



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 222/447 (49%), Gaps = 3/447 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G+I     +  K++++G  P  +T N L+  LC  G ++KA H   ++    
Sbjct: 348 LINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 407

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  +Y   I G C++ +   A+ L   +     +PN   ++ ++ ALCK  L+ +A 
Sbjct: 408 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 467

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+        ++DV+T + L+  +   G   +A+ L N+M  K I  D+  Y +L+
Sbjct: 468 GLFSEMTVKG---ISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILV 524

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +     G +  A +    MLK    PDV TYNTL+N      ++ +A H +  +S  GV 
Sbjct: 525 DALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVT 584

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y  +I G C    + +A      M +K++VP+   ++ ++DG  + G +S  + +
Sbjct: 585 PDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDL 644

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M   G  ++V T+N+LI    + G +  A +L  +M   GI P+ FT+ +L+   C 
Sbjct: 645 IDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCK 704

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A +++ ++L +G   D+  Y  +I GHC +G ++EA  + +K++  G   + + 
Sbjct: 705 GGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVT 764

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           F I+     +  E+DKA  + ++ + R
Sbjct: 765 FDIIINALFKKDENDKAEKLLRQMIAR 791



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 190/364 (52%), Gaps = 8/364 (2%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  T N  I G C   ++ +ALH    +   G + N+V++  L++ +C+ G    A+KF
Sbjct: 61  PDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKF 120

Query: 246 LGEVLADDDGK-ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
           L ++    DG+ A  +V     ++D+  K     +A  L+++M  K I  ++V Y+ LI 
Sbjct: 121 LRKI----DGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIY 176

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           GFC+ G +  A      M+ +   P+V TYN L++ LCK+GK+ EA     V+ K  V  
Sbjct: 177 GFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKS 236

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI- 423
           + I+Y T++ G  +  ++ KA+    +M    V P+ H +N++I+G+ +   +  A ++ 
Sbjct: 237 NVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLF 296

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
           ++++LS      +  FN ++ +  +      A SL   + L GI PD+FT N+LI   C+
Sbjct: 297 KEMILSR--FPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCH 354

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           +G I     +  ++L+RG  P  +T   LIKG C +G +K+A     K+   G  ++ + 
Sbjct: 355 MGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVS 414

Query: 544 FRIL 547
           +  L
Sbjct: 415 YATL 418



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 156/305 (51%), Gaps = 8/305 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           LKE +  L  M     V  T+  D R +  ++  L   GK+  A  +   M++    PDV
Sbjct: 498 LKEAIGLLNEM-----VLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDV 552

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+N L+N    + +++KA HV   MS M  +P+  TY   I G+C+   +D+AL+LF  
Sbjct: 553 FTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKE 612

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M    + P+ VT++ LV  LCK G +      + E+   D G+  +DVIT   L+D   K
Sbjct: 613 MHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEM--RDRGQP-ADVITYNSLIDGLCK 669

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           NG   +A+AL+N M  + I+ +   + +L++G C  G +  A   F  +L +G+  DV  
Sbjct: 670 NGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYI 729

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN ++   CKQG L+EA      + + G  P+ +++  II  L    +  KA + L  M+
Sbjct: 730 YNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMI 789

Query: 394 EKSVV 398
            + ++
Sbjct: 790 ARGLL 794



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 143/261 (54%)

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           N D + + +   ++LKRG+ PD +T NTL+  LC +G++ EA HF+  L   G   +Q+S
Sbjct: 41  NVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVS 100

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y T+I G+C  GD   A +FL  +  +   P   ++N IID   +   +S A+ +   M 
Sbjct: 101 YATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMT 160

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G+S+NV T++ LI      G + +A  L   M+L  I P+V TYN+L+ A C  G + 
Sbjct: 161 VKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVK 220

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A  +   ML+  +  ++ITY+ L+ G+     +K+A+ VF  +  +G+  D   + I+ 
Sbjct: 221 EAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMI 280

Query: 549 KRYRRMKESDKARDIHQKWLL 569
             + ++K  DKA ++ ++ +L
Sbjct: 281 NGFCKIKRVDKALNLFKEMIL 301



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 168/362 (46%), Gaps = 4/362 (1%)

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           +L + + +   G  P+ VT N L+  LC KG + +A+ F  ++LA   G   + V  +T 
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQ--GFQLNQVSYAT- 103

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L++   + GD   A+     +  +  + ++  YN +I+  C    +S A+  F +M  +G
Sbjct: 104 LINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKG 163

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
              +V+TY+TL+   C  GKL EA     V+    + P+  +Y  ++  LC  G + +A+
Sbjct: 164 ISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAK 223

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             L  ML+  V      ++ ++DGY    ++  A  + + M   GV+ +V ++N +I   
Sbjct: 224 SVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGF 283

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            +   +  A +L KEM+L   FP +  +N ++ +   + H   A+ L   +  +GI PD+
Sbjct: 284 CKIKRVDKALNLFKEMILSR-FPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDL 342

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            T   LI   C  G +     V AKI   G     +    L K      +  KA   H K
Sbjct: 343 FTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDK 402

Query: 567 WL 568
            L
Sbjct: 403 LL 404


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 218/397 (54%), Gaps = 3/397 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A  L  +M+++G  PD+LT N L++ LCK G++++++ +  ++ +    PN  T+N FI 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G CR   +D+A  L  ++ + G+ P+ +++N L+   CK   L +A  +L +++  + G 
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMV--NSGV 317

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
             ++   +TI+ + + K G    A  +  D   K    D   Y+ LING C +GD++ A 
Sbjct: 318 EPNEFTYNTII-NGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           A F + +++GF   +I YNTL+  L KQG + +A      + + G +PD  +Y  ++ GL
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G +  A   L   + K  +P+   +N +IDGY +  ++  A  I D MLS G++ +V
Sbjct: 437 CKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+N L+    +   + +     K ML  G  P++ TYN+LI + C    +  A++L+ E
Sbjct: 497 ITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKE 556

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           M  RG+TPDI+T   LI G C+ G + +A E+F  I+
Sbjct: 557 MKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 215/456 (47%), Gaps = 3/456 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E   + + A++  L   G    A  +  +M   G  PDV TH   +   C  G    A  
Sbjct: 108 EPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALR 167

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++  M       N  +Y A I+G+ + N   +A HLF  M   GI P+ +T N L+H LC
Sbjct: 168 LLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLC 227

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           KKG + ++ K   +V+         ++ T  I +    + G   +A  L   +  + +  
Sbjct: 228 KKGNVQESEKLFSKVMKRG---VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTP 284

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D+++YN LI GFC +  +  A  Y  +M+  G  P+  TYNT++N  CK G +  A    
Sbjct: 285 DVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKIL 344

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
                 G  PD+ +Y ++I GLC  GD+ +A       +EK       ++N ++ G  + 
Sbjct: 345 RDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQ 404

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G +  A  +   M+  G S +++T+N ++    + G + DA  +  + +  G  PD+FT+
Sbjct: 405 GLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTF 464

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N LI   C   ++  A+++ D ML  GITPD+ITY  L+ G C    +    + F  +  
Sbjct: 465 NTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLE 524

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            G   + I + IL + + + ++  +A ++ ++   R
Sbjct: 525 KGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR 560



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 221/438 (50%), Gaps = 10/438 (2%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           M+D G     +  D   H   ++  C+ G+   AL L   M  +G   + +++  +++  
Sbjct: 137 MKDIG-----IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGF 191

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
            K     +A H+  EM +    P+  T+N  I   C+   + ++  LFS +   G+ PN 
Sbjct: 192 YKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNL 251

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
            T NI +  LC+KG + +A + L  ++++     T DVI+   L+  + K+    +A   
Sbjct: 252 FTFNIFIQGLCRKGAIDEAARLLESIVSEG---LTPDVISYNTLICGFCKHSKLVEAECY 308

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            + M    ++ +   YN +INGFC  G + +A       + +GF+PD  TY++L+N LC 
Sbjct: 309 LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368

Query: 344 QGKLDEA-SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
            G ++ A + FY  + K G     I Y T+++GL   G +++A + +  M+E    P+  
Sbjct: 369 DGDMNRAMAVFYEAMEK-GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIW 427

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +N++++G  + G LS+A  I +  ++ G   ++FTFN LI    +  ++  A  +   M
Sbjct: 428 TYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTM 487

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           L  GI PDV TYN L+   C    +   +  +  ML +G TP+IITY  LI+  C    +
Sbjct: 488 LSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKV 547

Query: 523 KEAEEVFAKIQTLGLAID 540
            EA E+F +++T GL  D
Sbjct: 548 SEAMELFKEMKTRGLTPD 565



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 205/435 (47%), Gaps = 39/435 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G +  +  L  K++++G  P++ T N  +  LC+ G +++A  ++  +    
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  +YN  I G+C+ ++L +A      M N+G+ PN  T+N +++  CK G++ +A 
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD 341

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L + +         D  T + L++    +GD  +A+A++ +  +K  +  I+ YN L+
Sbjct: 342 KILRDAMFKG---FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G    G +  A      M++ G  PD+ TYN ++N LCK G L +A+         G  
Sbjct: 399 KGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI 458

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  ++ T+I G C   ++ KA E L +ML   + P+   +N +++G  +   L N    
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDT 518

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT---------- 473
              ML  G + N+ T+N LI +  +   + +A  L KEM   G+ PD+ T          
Sbjct: 519 FKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCS 578

Query: 474 --------------------------YNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
                                     +N++I A C   ++ +A +L+ +M      PD  
Sbjct: 579 NGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNY 638

Query: 508 TYTELIKGHCARGNM 522
           TY  +I  +C  GN+
Sbjct: 639 TYRVMIDSYCKTGNI 653



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 187/384 (48%), Gaps = 4/384 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G +  A  + R  + KG +PD  T++ L+N LC  GD+ +A  V  E  E 
Sbjct: 326 TIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +   YN  + G  +   + +AL L   M  +G  P+  T+N++V+ LCK G L DA
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L + +A        D+ T   L+D Y K  +  +A+ + + M    I  D++ YN L
Sbjct: 446 NGILNDAIAKG---CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +NG C    + +    F  ML++G  P++ITYN L+   CK  K+ EA   +  +   G+
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSM-LEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
            PD ++  T+I GLC +G++ KA E  +++  E        I+N++I+ +    ++S A 
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAE 622

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   M     + + +T+  +I +  + G+I  A +   E +  G+ P   T   ++   
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682

Query: 482 CNLGHIHLALQLYDEMLRRGITPD 505
           C    +  A+ + + M++ GI P+
Sbjct: 683 CVTHRLSEAVVIINLMVQNGIVPE 706



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 118/246 (47%), Gaps = 2/246 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C    +  A+ +   M+  G  PDV+T+N L+N LCK   L+      + M E 
Sbjct: 466 TLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK 525

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +PN  TYN  I  +C+  ++ +A+ LF  M   G+ P+ VT   L+  LC  G L  A
Sbjct: 526 GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKA 585

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +    V  + + K +       I+++++    +   A  L++ M   +   D   Y V+
Sbjct: 586 YELF--VTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVM 643

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+ +C  G+I  A  +  + + +G +P   T   +LNCLC   +L EA     ++ + G+
Sbjct: 644 IDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGI 703

Query: 363 APDQIS 368
            P++++
Sbjct: 704 VPEEVN 709



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 38/251 (15%)

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE--PHIW 404
           L+    F  V ++ G      +YK +I+ L +HG   +A E +L+ + K+V  +    ++
Sbjct: 21  LNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKF-EAMEDVLAEMRKNVDSKMLEGVY 79

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
             I+  YGR G +  A ++ + M  +    +V ++NA++      G    A  +   M  
Sbjct: 80  IGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKD 139

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQ-------------------------------- 492
            GI+PDV+T+ + + + C  G    AL+                                
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199

Query: 493 ---LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
              L+DEML++GI PDI+T+ +LI   C +GN++E+E++F+K+   G+  +   F I  +
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 550 RYRRMKESDKA 560
              R    D+A
Sbjct: 260 GLCRKGAIDEA 270


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 145/461 (31%), Positives = 228/461 (49%), Gaps = 43/461 (9%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            V++ LC+  ++  A  L R M + G VP+ + +  L++ L K   + +A  ++ EM  M
Sbjct: 213 VVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLM 272

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  T+N  I G CR+N + +   L   M   G  PN +T+ +L++ LC+ G + +A
Sbjct: 273 GCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEA 332

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA-LWNDMFQKNIQTDIVAYNV 301
              L +V   +D       +  TIL++ Y K+G   +A A L++ M +   + D+  +N 
Sbjct: 333 QVLLNKVPTPND-------VHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNT 385

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LI+G C  G + SA      M   G  P++ITY TLL+  CK+ +L+EA +    +S  G
Sbjct: 386 LIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKG 445

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
              + + Y  +++ LC +G + KA + L  M +K   P+   +N +I G  +     +A 
Sbjct: 446 FELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDAL 505

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           ++   ML  GV +N  T+N LI A  RGG+I +A  L  +ML  G   D  TYN LI A 
Sbjct: 506 ALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAF 565

Query: 482 CNLGHIHLALQLYDEMLR-----------------------------------RGITPDI 506
           C LG    AL L+DEM+R                                   RG+ PD+
Sbjct: 566 CKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDV 625

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +TY  LI G C  GN++EA  +F K+Q  G+  D I +  L
Sbjct: 626 VTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTL 666



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/403 (32%), Positives = 210/403 (52%), Gaps = 8/403 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC   +I     L  +M+ +G  P+ +T+  L+N LC++G +++A  ++ ++    
Sbjct: 284 VIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKV---- 339

Query: 184 PSPNCATYNAFITGYCRVNELDKA-LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           P+PN   +   I GY +   LD+A   L+  M  NG RP+  T N L+H LCKKGL+G A
Sbjct: 340 PTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSA 399

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V  + ++ A+     T ++IT T L+D + K     +A  + N+M  K  + +I+ YNVL
Sbjct: 400 VDMVNDMSANG---CTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVL 456

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +   C NG +  A     +M  +G  PD+ T+NTL+  LCK  + ++A   Y  +   GV
Sbjct: 457 LRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGV 516

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             + ++Y T+I      G I +A + +  ML +    +   +N +I  + + G    A  
Sbjct: 517 IANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALG 576

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M+   +  +  + N LI    R G + +A  L ++M+  G+ PDV TYN LI   C
Sbjct: 577 LFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLC 636

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            +G+I  A  L++++   GI PD ITY  LI  HC  G   +A
Sbjct: 637 KMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDA 679



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 157/291 (53%), Gaps = 3/291 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++   C   ++  A ++  +M  KG   +++ +N L+  LCK G + KA  ++ EMS
Sbjct: 418 YTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMS 477

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    P+  T+N  I G C+V+  + AL L+  M  +G+  N VT+N L+HA  + G + 
Sbjct: 478 DKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQ 537

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+K + ++L         D IT   L+ ++ K G   +AL L+++M +K++    ++ N
Sbjct: 538 EALKLVNDMLFRG---CPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCN 594

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LING C  G + +A      M+ RG  PDV+TYN+L+N LCK G + EA + +  L   
Sbjct: 595 LLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAE 654

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
           G+ PD I+Y T+I   C  G    A   LL  +E + +P    W +++  +
Sbjct: 655 GIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNF 705



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 142/285 (49%), Gaps = 5/285 (1%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  ++ +M  K +   +  + V++   C+  ++ +A +    M K G +P+ + Y TL++
Sbjct: 192 AANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIH 251

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            L K+ +++EA      +   G  PD  ++  +I GLC    I +  + +  ML +   P
Sbjct: 252 ALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTP 311

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS-L 458
               + V+++G  R G +  A     ++L+   + N   F  LI    + G + +A + L
Sbjct: 312 NDITYGVLMNGLCRVGKVDEA----QVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFL 367

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
             +M+ +G  PDVFT+N LI   C  G +  A+ + ++M   G TP++ITYT L+ G C 
Sbjct: 368 YDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCK 427

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           +  ++EA  V  ++   G  ++ + + +L +   +  +  KA D+
Sbjct: 428 KNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDM 472



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/429 (22%), Positives = 187/429 (43%), Gaps = 15/429 (3%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           QKG       ++ L+++L    + +  D ++ ++ E   +   + +   +  Y R N   
Sbjct: 95  QKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPG 154

Query: 206 KALHLFSTMANNGI---RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +A  +   M   G+    P   ++N+++  L        A     E+L+         V 
Sbjct: 155 QATRMLLDM--KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKG---VIPTVY 209

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T  ++M +     +   A +L  DM +     + V Y  LI+       ++ A     +M
Sbjct: 210 TFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEM 269

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
              G LPDV T+N ++  LC+  ++ E +     +   G  P+ I+Y  ++ GLC  G +
Sbjct: 270 FLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKV 329

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG--DLSNAFSIRDLMLSFGVSSNVFTFN 440
            +A+     +L K   P    + ++I+GY + G  D +NAF + D M+  G   +VFTFN
Sbjct: 330 DEAQ----VLLNKVPTPNDVHFTILINGYVKSGRLDEANAF-LYDKMIKNGCRPDVFTFN 384

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            LI    + G +  A  +  +M  +G  P++ TY  L+   C    +  A  + +EM  +
Sbjct: 385 TLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAK 444

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G   +I+ Y  L++  C  G + +A ++  ++   G   D   F  L     ++   + A
Sbjct: 445 GFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDA 504

Query: 561 RDIHQKWLL 569
             +++  LL
Sbjct: 505 LALYRDMLL 513



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 124/248 (50%), Gaps = 10/248 (4%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           LD L  M D G      + D      +I  LC   +   AL L R M+  G + + +T+N
Sbjct: 470 LDMLGEMSDKG-----CKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYN 524

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSP-NCATYNAFITGYCRVNELDKALHLFSTMAN 216
            L++   + G +++A  ++ +M   R  P +  TYN  I  +C++   +KAL LF  M  
Sbjct: 525 TLIHAFLRGGAIQEALKLVNDML-FRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVR 583

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
             + P+ ++ N+L++ LC+ G + +A++ L +++         DV+T   L++   K G+
Sbjct: 584 KDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRG---LAPDVVTYNSLINGLCKMGN 640

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A  L+N +  + IQ D + YN LI   C  G    A+    + ++  F+P+ +T+  
Sbjct: 641 IREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYI 700

Query: 337 LLNCLCKQ 344
           L++   K+
Sbjct: 701 LVSNFIKE 708



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 4/208 (1%)

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P   SY  ++  L        A      ML K V+P  + + V++       ++ NA S+
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G   N   +  LI A ++   + +A  L +EM L G  PDV T+N +I   C 
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           L  IH   +L D ML RG TP+ ITY  L+ G C  G + EA+ +  K+ T     + + 
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVH 346

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLRN 571
           F IL   Y +    D+A       +++N
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKN 374


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 222/412 (53%), Gaps = 3/412 (0%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T + L ++M  KG VPD++T + L+N  C +G +  +  V+ ++ ++   PN    N  +
Sbjct: 28  TVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLM 87

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   E+ K+LH    +   G + ++V++ IL++ LCK G    A+K L  +   +D 
Sbjct: 88  KGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTI---EDR 144

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               DV+  + ++D   K+    +A  L+++M  + I  D++ Y  LI GFCL G +  A
Sbjct: 145 STRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEA 204

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           F    +M+ +   P++ TYNTL++ LCK+GK+ E+ +   V++K GV PD + Y  ++ G
Sbjct: 205 FGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDG 264

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C+ G++ KA++  L M++  V P+ + +N+II+G  +   +  A ++   ML   +  +
Sbjct: 265 YCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPD 324

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             T+++LI    + G I     L KEM   G   ++ TYN L+   C   ++  A+ L+ 
Sbjct: 325 TVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFM 384

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +M  RGI P+  TYT LI G C  G +K+ + +F  +   G  ID   + ++
Sbjct: 385 KMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVM 436



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 216/423 (51%), Gaps = 7/423 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +++ LCL G++  +L    K++ +G   D +++  L+N LCKIG+   A  ++R + + 
Sbjct: 85  TLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDR 144

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   Y+  I G C+   +D+A  L+S M   GI P+ +T+  L+   C  G L +A
Sbjct: 145 STRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEA 204

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E++  +      ++ T   L+D+  K G   ++  L   M +K ++ D+V Y++L
Sbjct: 205 FGLLNEMILKN---INPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSIL 261

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+CL G++  A   F  M++ G  PDV +YN ++N LCK  ++DEA +    +    +
Sbjct: 262 MDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNM 321

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y ++I GLC  G I    +    M  +        +N ++DG  +  +L  A +
Sbjct: 322 IPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIA 381

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M   G+  N +T+ ALI    +GG +    +L + +L+ G   DV+TY ++I   C
Sbjct: 382 LFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLC 441

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G    AL +  +M   G  P+ +T+  +I+    +    +AE++  ++   GL    +
Sbjct: 442 KEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGL----L 497

Query: 543 PFR 545
           PFR
Sbjct: 498 PFR 500



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 197/427 (46%), Gaps = 38/427 (8%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M  +R  P    +   +    ++      + L   M   GI P+ VT +IL++  C  G 
Sbjct: 1   MLLLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQ 60

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           +  +   LG++L    G   + +I +T LM      G+  ++L   + +  +  Q D V+
Sbjct: 61  MAFSFSVLGKIL--KLGYQPNTIILNT-LMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVS 117

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y +L+NG C  G+   A      +  R   PDV+ Y+T+++ LCK   +DEA   Y  ++
Sbjct: 118 YGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMN 177

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKA--------------------------------- 385
             G+ PD I+Y T+I G C+ G +++A                                 
Sbjct: 178 ARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVK 237

Query: 386 --REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
             +  L  M +K V P+  I+++++DGY   G++  A  I  +M+  GV+ +V+++N +I
Sbjct: 238 ESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIII 297

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               +G  + +A +L +EML   + PD  TY+ LI   C LG I   L L  EM  RG  
Sbjct: 298 NGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQP 357

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            +++TY  L+ G C   N+ +A  +F K++  G+  +   +  L     +     K + +
Sbjct: 358 ANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQAL 417

Query: 564 HQKWLLR 570
            Q  L++
Sbjct: 418 FQHLLVK 424



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 161/292 (55%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            ++L   M  K I  D+V  ++LIN FC  G ++ +F+   ++LK G+ P+ I  NTL+ 
Sbjct: 29  VISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMK 88

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LC +G++ ++ HF+  +   G   DQ+SY  ++ GLC  G+   A + L ++ ++S  P
Sbjct: 89  GLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRP 148

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +  +++ IIDG  +   +  A+ +   M + G+  +V T+  LI      G + +AF L 
Sbjct: 149 DVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLL 208

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            EM+L  I P+++TYN LI   C  G +  +  L   M ++G+ PD++ Y+ L+ G+C  
Sbjct: 209 NEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLV 268

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           G +++A+++F  +   G+  D   + I+     + K  D+A ++ ++ L +N
Sbjct: 269 GEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKN 320



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 148/292 (50%), Gaps = 3/292 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I   CL G++  A  L  +MI K   P++ T+N L++ LCK G ++++ +++
Sbjct: 184 DVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLL 243

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M++    P+   Y+  + GYC V E+ KA  +F  M   G+ P+  ++NI+++ LCK 
Sbjct: 244 AVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKG 303

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             + +A+  L E+L  +      D +T + L+D   K G     L L  +M  +    ++
Sbjct: 304 KRVDEAMNLLREMLHKN---MIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANL 360

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YN L++G C N ++  A A F +M +RG  P+  TY  L++ LCK G+L +    +  
Sbjct: 361 VTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQH 420

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           L   G   D  +Y  +I GLC  G   +A      M +   +P    + +II
Sbjct: 421 LLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIII 472



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 166/353 (47%), Gaps = 3/353 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  LC    +  A  L  +M  +G  PDV+T+  L+   C  G L +A  ++
Sbjct: 149 DVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLL 208

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM     +PN  TYN  I   C+  ++ ++ +L + M   G++P+ V ++IL+   C  
Sbjct: 209 NEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYC-- 266

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
            L+G+  K     L         DV +  I+++   K     +A+ L  +M  KN+  D 
Sbjct: 267 -LVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDT 325

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y+ LI+G C  G I++      +M  RG   +++TYN+LL+ LCK   LD+A   +  
Sbjct: 326 VTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMK 385

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + + G+ P++ +Y  +I GLC  G + K +     +L K    +   + V+I G  + G 
Sbjct: 386 MKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGM 445

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
              A +++  M   G   N  TF  +I +         A  L  EM+  G+ P
Sbjct: 446 FDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 38/255 (14%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V+  +  D   +  +I  LC G ++  A+ L R+M+ K  +PD +T++ L++ LCK+G +
Sbjct: 282 VQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRI 341

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
                + +EM       N  TYN+ + G C+   LDKA+ LF  M   GI+PN+ T+  L
Sbjct: 342 TTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTAL 401

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LCK G L                                 K G      AL+  +  
Sbjct: 402 IDGLCKGGRL---------------------------------KKGQ-----ALFQHLLV 423

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K    D+  Y V+I+G C  G    A A   +M   G +P+ +T+  ++  L ++ + D+
Sbjct: 424 KGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDK 483

Query: 350 ASHFYGVLSKTGVAP 364
           A      +   G+ P
Sbjct: 484 AEKLLHEMIAKGLLP 498



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 13/162 (8%)

Query: 74  NKDSDNEGNPQ--AVFNAL--DLILKENLDR----LKTMRDTGPVRCTLETDYRRHVAVI 125
            K+  + G P     +N+L   L   +NLD+       M++ G     ++ +   + A+I
Sbjct: 348 TKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERG-----IQPNKYTYTALI 402

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
             LC GG++     L + ++ KG   DV T+  +++ LCK G  ++A  +  +M +    
Sbjct: 403 DGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCI 462

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           PN  T+   I      +E DKA  L   M   G+ P R  H+
Sbjct: 463 PNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLPFRNFHS 504


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 216/412 (52%), Gaps = 3/412 (0%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           TA+ L ++M  KG  PD++T + L+N  C +G +  +  V+ ++ ++   PN       +
Sbjct: 150 TAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLM 209

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   E+ K+LH    +   G + N+V++  L++ LCK G    A+K L  +   +D 
Sbjct: 210 KGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMI---EDR 266

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               DV+    ++D   K+    +A   + +M  + I  D++ Y+ LI GFCL G +  A
Sbjct: 267 STRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGA 326

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           F+   +M  +   PDV TY  L++ LCK+GKL EA +  GV++K GV P+ ++Y T++ G
Sbjct: 327 FSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDG 386

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C+ G++  A++   +M++  V P    +N++I+G  +   +  A ++   ML   V  N
Sbjct: 387 YCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPN 446

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             T+N+LI    + G I  A  L KE+   G   DV TY  L+   C   ++  A+ L+ 
Sbjct: 447 TVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFM 506

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +M  RGI P+  TYT LI G C    +K A+++F  I   G  ID   + ++
Sbjct: 507 KMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVM 558



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 220/457 (48%), Gaps = 3/457 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D      +I   C  G++  +  +  K+++ G  P+ +    L+  LC  G+++K+ 
Sbjct: 163 IEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSL 222

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           H   ++       N  +Y   + G C++ E   A+ L   + +   RP+ V +N ++  L
Sbjct: 223 HFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGL 282

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK  L+ +A  F  E+   +      DVIT + L+  +   G    A +L N+M  KNI 
Sbjct: 283 CKDKLVNEAYDFYTEM---NSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNIN 339

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+  Y +LI+  C  G +  A      M K G  P+V+TY+TL++  C  G++  A   
Sbjct: 340 PDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQI 399

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  + +T V P   SY  +I GLC    + +A   L  ML K+VVP    +N +IDG  +
Sbjct: 400 FHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCK 459

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G +++A  +   +   G  ++V T+ +L+    +  ++  A +L  +M   GI P+ +T
Sbjct: 460 SGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYT 519

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  LI   C    +  A +L+  +L +G   D+ TY  +I G C  G + EA  + +K++
Sbjct: 520 YTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKME 579

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
             G   D + F I+ +      E+DKA  +  + + +
Sbjct: 580 DNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 616



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 215/415 (51%), Gaps = 3/415 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +++ LCL G++  +L    K++ +G   + +++  L+N LCKIG+   A  ++R + + 
Sbjct: 207 TLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDR 266

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   YN  I G C+   +++A   ++ M + GI P+ +T++ L+   C  G L  A
Sbjct: 267 STRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGA 326

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E+   +      DV T TIL+D+  K G   +A  L   M ++ ++ ++V Y+ L
Sbjct: 327 FSLLNEMTLKN---INPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTL 383

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+CL G++ +A   F  M++    P V +YN ++N LCK   +DEA +    +    V
Sbjct: 384 MDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNV 443

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ ++Y ++I GLC  G I  A + +  +  +    +   +  ++DG  +  +L  A +
Sbjct: 444 VPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIA 503

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M   G+  N +T+ ALI    +G  + +A  L + +L+ G   DV+TYN++IG  C
Sbjct: 504 LFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLC 563

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
             G +  AL +  +M   G  PD +T+  +I+    +    +AE++  ++   GL
Sbjct: 564 KEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 196/424 (46%), Gaps = 38/424 (8%)

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
           MR +P+   +   +    ++     A+ L   M   GI P+ VT +IL++  C  G +  
Sbjct: 126 MRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAF 185

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           +   LG++L    G   + +I +T LM      G+  ++L   + +  +  Q + V+Y  
Sbjct: 186 SFSVLGKIL--KLGYQPNTIILTT-LMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGT 242

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L+NG C  G+   A      +  R   PDV+ YNT+++ LCK   ++EA  FY  ++  G
Sbjct: 243 LLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRG 302

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD I+Y T+I G C+ G ++ A   L  M  K++ P+ + + ++ID   + G L  A 
Sbjct: 303 IFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAK 362

Query: 422 SIRDLMLSFGVSSNVFT--------------------FNALILAET-------------- 447
           ++  +M   GV  NV T                    F+A++  E               
Sbjct: 363 NLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGL 422

Query: 448 -RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            +G S+ +A +L +EML   + P+  TYN LI   C  G I  AL L  E+  RG   D+
Sbjct: 423 CKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADV 482

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           ITYT L+ G C   N+ +A  +F K++  G+  +   +  L     +      A+ + Q 
Sbjct: 483 ITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQH 542

Query: 567 WLLR 570
            L++
Sbjct: 543 ILVK 546



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 218/447 (48%), Gaps = 31/447 (6%)

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           KG VP+++T + L+N L  +G +  +  V+ ++ ++   PN  T    + G  R      
Sbjct: 5   KGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRC----- 59

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKG---------------------LLGDAV-K 244
           A+ L   + +   RP     + L H++                         ++ DAV +
Sbjct: 60  AIKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQ 119

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
           F G +L     + T  +I    ++ S  K      A++L   M  K I+ D+V  ++LIN
Sbjct: 120 FNGMLLM----RNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILIN 175

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
            FC  G ++ +F+   ++LK G+ P+ I   TL+  LC +G++ ++ HF+  +   G   
Sbjct: 176 CFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQM 235

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           +Q+SY T++ GLC  G+   A + L  + ++S  P+  ++N IIDG  +   ++ A+   
Sbjct: 236 NQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFY 295

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
             M S G+  +V T++ LI      G +  AFSL  EM L  I PDV+TY +LI A C  
Sbjct: 296 TEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKE 355

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G +  A  L   M + G+ P+++TY+ L+ G+C  G +  A+++F  +    +      +
Sbjct: 356 GKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSY 415

Query: 545 RILKKRYRRMKESDKARDIHQKWLLRN 571
            I+     + K  D+A ++ ++ L +N
Sbjct: 416 NIMINGLCKGKSVDEAMNLLREMLHKN 442



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 151/285 (52%), Gaps = 3/285 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   +  +I  LC  GK+  A  L   M ++G  P+V+T++ L++  C +G++  A 
Sbjct: 338 INPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAK 397

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M +   +P+  +YN  I G C+   +D+A++L   M +  + PN VT+N L+  L
Sbjct: 398 QIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGL 457

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G +  A+  + E+     G+  +DVIT T L+D   KN +  +A+AL+  M ++ IQ
Sbjct: 458 CKSGRITSALDLMKEL--HHRGQP-ADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQ 514

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +   Y  LI+G C    + +A   F  +L +G   DV TYN ++  LCK+G LDEA   
Sbjct: 515 PNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAM 574

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
              +   G  PD ++++ II+ L    +  KA + L  M+ K ++
Sbjct: 575 KSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 13/160 (8%)

Query: 75  KDSDNEGNPQAVFNALDLI----LKENLDR----LKTMRDTGPVRCTLETDYRRHVAVIR 126
           K+  + G P  V     L+      +NLD+       M++ G     ++ +   + A+I 
Sbjct: 471 KELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERG-----IQPNKYTYTALID 525

Query: 127 DLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
            LC G ++  A  L + ++ KG   DV T+N ++  LCK G L++A  +  +M +    P
Sbjct: 526 GLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIP 585

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           +  T+   I      +E DKA  L   M   G+   R  H
Sbjct: 586 DAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLHFRNFH 625


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 218/397 (54%), Gaps = 3/397 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A  L  +M+++G  PD+LT N L++ LCK G++++++ +  ++ +    PN  T+N FI 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G CR   +D+A  L  ++ + G+ P+ +++N L+   CK   L +A  +L +++  + G 
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMV--NSGV 317

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
             ++   +TI+ + + K G    A  +  D   K    D   Y+ LING C +GD++ A 
Sbjct: 318 EPNEFTYNTII-NGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           A F + +++GF   +I YNTL+  L KQG + +A      + + G +PD  +Y  ++ GL
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G +  A   L   + K  +P+   +N +IDGY +  ++  A  I D MLS G++ +V
Sbjct: 437 CKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+N L+    +   + +     K ML  G  P++ TYN+LI + C    +  A++L+ E
Sbjct: 497 ITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKE 556

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           M  RG+TPDI+T   LI G C+ G + +A E+F  I+
Sbjct: 557 MKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 215/456 (47%), Gaps = 3/456 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E   + + A++  L   G    A  +  +M   G  PDV TH   +   C  G    A  
Sbjct: 108 EPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALR 167

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++  M       N  +Y A I+G+ + N   +A HLF  M   GI P+ +T N L+H LC
Sbjct: 168 LLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLC 227

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           KKG + ++ K   +V+         ++ T  I +    + G   +A  L   +  + +  
Sbjct: 228 KKGNVQESEKLFSKVMKRG---VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTP 284

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D+++YN LI GFC +  +  A  Y  +M+  G  P+  TYNT++N  CK G +  A    
Sbjct: 285 DVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKIL 344

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
                 G  PD+ +Y ++I GLC  GD+ +A       +EK       ++N ++ G  + 
Sbjct: 345 RDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQ 404

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G +  A  +   M+  G S +++T+N ++    + G + DA  +  + +  G  PD+FT+
Sbjct: 405 GLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTF 464

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N LI   C   ++  A+++ D ML  GITPD+ITY  L+ G C    +    + F  +  
Sbjct: 465 NTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLE 524

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            G   + I + IL + + + ++  +A ++ ++   R
Sbjct: 525 KGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR 560



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 221/438 (50%), Gaps = 10/438 (2%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           M+D G     +  D   H   ++  C+ G+   AL L   M  +G   + +++  +++  
Sbjct: 137 MKDIG-----IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGF 191

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
            K     +A H+  EM +    P+  T+N  I   C+   + ++  LFS +   G+ PN 
Sbjct: 192 YKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNL 251

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
            T NI +  LC+KG + +A + L  ++++     T DVI+   L+  + K+    +A   
Sbjct: 252 FTFNIFIQGLCRKGAIDEAARLLESIVSEG---LTPDVISYNTLICGFCKHSKLVEAECY 308

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            + M    ++ +   YN +INGFC  G + +A       + +GF+PD  TY++L+N LC 
Sbjct: 309 LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368

Query: 344 QGKLDEA-SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
            G ++ A + FY  + K G     I Y T+++GL   G +++A + +  M+E    P+  
Sbjct: 369 DGDMNRAMAVFYEAMEK-GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIW 427

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +N++++G  + G LS+A  I +  ++ G   ++FTFN LI    +  ++  A  +   M
Sbjct: 428 TYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTM 487

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           L  GI PDV TYN L+   C    +   +  +  ML +G TP+IITY  LI+  C    +
Sbjct: 488 LSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKV 547

Query: 523 KEAEEVFAKIQTLGLAID 540
            EA E+F +++T GL  D
Sbjct: 548 SEAMELFKEMKTRGLTPD 565



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 205/435 (47%), Gaps = 39/435 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G +  +  L  K++++G  P++ T N  +  LC+ G +++A  ++  +    
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  +YN  I G+C+ ++L +A      M N+G+ PN  T+N +++  CK G++ +A 
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD 341

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L + +         D  T + L++    +GD  +A+A++ +  +K  +  I+ YN L+
Sbjct: 342 KILRDAMFKG---FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G    G +  A      M++ G  PD+ TYN ++N LCK G L +A+         G  
Sbjct: 399 KGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI 458

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  ++ T+I G C   ++ KA E L +ML   + P+   +N +++G  +   L N    
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDT 518

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT---------- 473
              ML  G + N+ T+N LI +  +   + +A  L KEM   G+ PD+ T          
Sbjct: 519 FKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCS 578

Query: 474 --------------------------YNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
                                     +N++I A C   ++ +A +L+ +M      PD  
Sbjct: 579 NGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNY 638

Query: 508 TYTELIKGHCARGNM 522
           TY  +I  +C  GN+
Sbjct: 639 TYRVMIDSYCKTGNI 653



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 192/397 (48%), Gaps = 4/397 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   +E +   +  +I   C  G +  A  + R  + KG +PD  T++ L+N LC  GD+
Sbjct: 313 VNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDM 372

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A  V  E  E     +   YN  + G  +   + +AL L   M  +G  P+  T+N++
Sbjct: 373 NRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLV 432

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           V+ LCK G L DA   L + +A        D+ T   L+D Y K  +  +A+ + + M  
Sbjct: 433 VNGLCKMGCLSDANGILNDAIAKG---CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLS 489

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             I  D++ YN L+NG C    + +    F  ML++G  P++ITYN L+   CK  K+ E
Sbjct: 490 HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSE 549

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM-LEKSVVPEPHIWNVII 408
           A   +  +   G+ PD ++  T+I GLC +G++ KA E  +++  E        I+N++I
Sbjct: 550 AMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMI 609

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           + +    ++S A  +   M     + + +T+  +I +  + G+I  A +   E +  G+ 
Sbjct: 610 NAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLV 669

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
           P   T   ++   C    +  A+ + + M++ GI P+
Sbjct: 670 PSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 119/246 (48%), Gaps = 2/246 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C    +  A+ +   M+  G  PDV+T+N L+N LCK   L+      + M E 
Sbjct: 466 TLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK 525

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +PN  TYN  I  +C+  ++ +A+ LF  M   G+ P+ VT   L+  LC  G L  A
Sbjct: 526 GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKA 585

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +    V  + + K +       I+++++ +  +   A  L++ M   +   D   Y V+
Sbjct: 586 YELF--VTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVM 643

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+ +C  G+I  A  +  + + +G +P   T   +LNCLC   +L EA     ++ + G+
Sbjct: 644 IDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGI 703

Query: 363 APDQIS 368
            P++++
Sbjct: 704 VPEEVN 709



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 38/251 (15%)

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE--PHIW 404
           L+    F  V ++ G      +YK +I+ L +HG   +A E +L+ + K+V  +    ++
Sbjct: 21  LNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKF-EAMEDVLAEMRKNVDSKMLEGVY 79

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
             I+  YGR G +  A ++ + M  +    +V ++NA++      G    A  +   M  
Sbjct: 80  IGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKD 139

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQ-------------------------------- 492
            GI+PDV+T+ + + + C  G    AL+                                
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199

Query: 493 ---LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
              L+DEML++GI PDI+T+ +LI   C +GN++E+E++F+K+   G+  +   F I  +
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 550 RYRRMKESDKA 560
              R    D+A
Sbjct: 260 GLCRKGAIDEA 270


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 223/461 (48%), Gaps = 14/461 (3%)

Query: 94  LKENLDRLKTMRDTG-----PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKG 148
           L + L R K  R+ G      +  + E D   +  VI   C  G +  AL L  +M   G
Sbjct: 83  LLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAG 142

Query: 149 TVPDVLTHNYLVNELCKIGDLEKA-DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
             PD  TH  ++  +   GDL+ A DH    +  M   PN  TY A I  + R  +L++A
Sbjct: 143 FAPDAFTHTPIITAMANAGDLDGAMDH----LRSMGCDPNVVTYTALIAAFARAKKLEEA 198

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + L   M   G  PN VT+N+LV ALCK  ++G A   + +++   +G    +V+T   L
Sbjct: 199 MKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI---EGGFAPNVMTFNSL 255

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D + K G+   A  L   M  K ++ ++V Y+ LI+G C +     A     +M  RG 
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGV 315

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PD  TY+ L++ LCK  K++EA      ++ +G  PD + Y +II   C  G +++A++
Sbjct: 316 TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQK 375

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG-VSSNVFTFNALILAE 446
            L  M ++   P+   +N +IDG  + G ++ A  I + M   G V  +V T++ +I   
Sbjct: 376 TLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGL 435

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            +   + +A  L   M   G  PDV TY  +I   C  G +  A  L   M R G  P++
Sbjct: 436 CKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNV 495

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +TYT LI G C    + EAE V  +++  G   + + +  +
Sbjct: 496 VTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTM 536



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 212/417 (50%), Gaps = 6/417 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I       K+  A+ L  +M ++G  P+++T+N LV+ LCK+  +  A  V+++M 
Sbjct: 182 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 241

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   +PN  T+N+ + G+C+   +D A  L   M   G+RPN VT++ L+  LCK     
Sbjct: 242 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 301

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A + L E+        T D  T + L+    K     +A  +   M       D+V Y+
Sbjct: 302 EAKEVLEEM---KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 358

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I+ FC +G +  A     +M K+   PDV+TYNT+++ LCK GK+ EA      + ++
Sbjct: 359 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQES 418

Query: 361 G-VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
           G V PD ++Y T+I GLC    +V+A++ L  M +    P+   +  IIDG  +CG L  
Sbjct: 419 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEE 478

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +   M   G + NV T+  LI    +   + +A  + +EM   G  P++ TYN ++ 
Sbjct: 479 AEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVN 538

Query: 480 ASCNLGHIHLALQLYDEML--RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
             C  G I  A QL   M   R   +PD  TY  ++    +   ++EAE++  ++++
Sbjct: 539 GLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 102/222 (45%), Gaps = 3/222 (1%)

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           GF     ++N+LL  L +  K  EA   +         PD  SY  +I G C  GD+  A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E L  M      P+      II      GDL  A    D + S G   NV T+ ALI A
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVTYTALIAA 188

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             R   + +A  L +EM   G  P++ TYN+L+ A C L  +  A  +  +M+  G  P+
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++T+  L+ G C RGN+ +A ++   +   G+  + + +  L
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSAL 290



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 135/305 (44%), Gaps = 51/305 (16%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           KE L+ +KT R   P       D   + A+I  LC   KI  A  + R+M   G  PDV+
Sbjct: 304 KEVLEEMKT-RGVTP-------DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVV 355

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
            ++ +++  CK G L +A   ++EM + R SP+  TYN  I G C++ ++ +A  +   M
Sbjct: 356 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQM 415

Query: 215 ANNG-IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
             +G + P+ VT++ +++ LCK  +L +A K L  +          DV+T T ++D   K
Sbjct: 416 QESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMC---KAGCNPDVVTYTTIIDGLCK 472

Query: 274 NGDKFQALALWNDMFQ----KNIQT-------------------------------DIVA 298
            G   +A  L   M +     N+ T                               ++V 
Sbjct: 473 CGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVT 532

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFL---PDVITYNTLLNCLCKQGKLDEASHFYG 355
           YN ++NG C++G I  A     Q +K G     PD  TY T++N L     + EA     
Sbjct: 533 YNTMVNGLCVSGRIKEA-QQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLE 591

Query: 356 VLSKT 360
            +  T
Sbjct: 592 QMKST 596



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 12/165 (7%)

Query: 415 GDLSNAFSIRDLMLSF---------GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
           G + N+     L L+F         G S   F++N+L+    R     +A  L +  LL 
Sbjct: 47  GRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLA 106

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
              PDV +YN++I   CN G +H AL+L +EM   G  PD  T+T +I      G++  A
Sbjct: 107 SCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA 166

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            +    ++++G   + + +  L   + R K+ ++A  + ++   R
Sbjct: 167 MD---HLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRER 208



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 3/165 (1%)

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           WN ++    RC     A  +    L      +V ++N +I      G +  A  L +EM 
Sbjct: 80  WNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMK 139

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             G  PD FT+  +I A  N G +  A+   D +   G  P+++TYT LI        ++
Sbjct: 140 SAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVTYTALIAAFARAKKLE 196

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           EA ++  +++  G   + + + +L     ++     A+D+ +K +
Sbjct: 197 EAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 241


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 203/389 (52%), Gaps = 3/389 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G  P+V T+N LV  LC  G  ++A  ++R+M      PN  TYN  +  + R  E
Sbjct: 181 MLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGE 240

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A  L   M   G++PN VT N +V+ +CK G + DA K   E++ +       D ++
Sbjct: 241 VDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREG---LAPDGVS 297

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              L+  Y K G   +AL+++ +M QK I  D+V +  LI+  C  G++  A     QM 
Sbjct: 298 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMR 357

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           +RG   + +T+  L++  CK+G LD+A      + +  + P  + Y  +I G C+ G + 
Sbjct: 358 ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMD 417

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +ARE L  M  K + P+   ++ II  Y +  D  +AF +   ML  GV  +  T+++LI
Sbjct: 418 EARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 477

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                   + DA  L K M+  G+ PD FTY  LI   C  G++  AL L+D+M++ G+ 
Sbjct: 478 RVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVL 537

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKI 532
           PD++TY+ LI G        EA+++  K+
Sbjct: 538 PDVVTYSVLINGLSKSARAMEAQQLLFKL 566



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 235/508 (46%), Gaps = 33/508 (6%)

Query: 54  NDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAVFNALDLIL------KENLDRLKTMRDT 107
           N ++  + D   +  R +F +  SD        +N L   L      KE L  L+ MR  
Sbjct: 160 NAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGA 219

Query: 108 G--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCK 165
           G  P   T  T       ++      G++  A  L   M + G  P+++T N +VN +CK
Sbjct: 220 GCGPNVVTYNT-------LVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272

Query: 166 IGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
            G +E A  V  EM     +P+  +YN  + GYC+     +AL +F+ M   GI P+ VT
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
              L+H +CK G L  AV  + ++   + G   ++V T T L+D + K G    AL    
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQM--RERGLQMNEV-TFTALIDGFCKKGFLDDALLAVR 389

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M Q  I+  +V YN LING+C+ G +  A     +M  +G  PDV+TY+T+++  CK  
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
               A      + + GV PD I+Y ++I+ LC    +  A     +M++  + P+   + 
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            +IDG+ + G++ +A S+ D M+  GV  +V T++ LI   ++     +A  L  ++  +
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 569

Query: 466 GIFPDVFTYN---------------LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
              P    Y+                L+   C  G ++ A ++Y  ML R    D   Y+
Sbjct: 570 DPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYS 629

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            LI GHC  GN+ +A     ++   G A
Sbjct: 630 VLIHGHCRAGNVMKALSFHKQMLQGGFA 657



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 192/383 (50%), Gaps = 4/383 (1%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+   YNA +      + L  A   F +M ++G+ PN  T+NILV ALC +G   +A+  
Sbjct: 154 PSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L ++     G    +V+T   L+ ++F+ G+   A  L   M +  ++ ++V +N ++NG
Sbjct: 213 LRDMRGAGCGP---NVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C  G +  A   F +M++ G  PD ++YNTL+   CK G   EA   +  +++ G+ PD
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            +++ ++I  +C  G++ +A   +  M E+ +      +  +IDG+ + G L +A     
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M    +  +V  +NALI      G + +A  L  EM   G+ PDV TY+ +I A C   
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
             H A +L  +ML +G+ PD ITY+ LI+  C    + +A  +F  +  LGL  D   + 
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509

Query: 546 ILKKRYRRMKESDKARDIHQKWL 568
            L   + +    + A  +H K +
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMV 532



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 202/443 (45%), Gaps = 18/443 (4%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR  L  D   +  ++   C  G    AL +  +M QKG +PDV+T   L++ +CK G+L
Sbjct: 287 VREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNL 346

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E+A  ++R+M E     N  T+ A I G+C+   LD AL     M    I+P+ V +N L
Sbjct: 347 ERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNAL 406

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           ++  C  G + +A + L E+ A        DV+T + ++ +Y KN D   A  L   M +
Sbjct: 407 INGYCMVGRMDEARELLHEMEAKG---LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLE 463

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K +  D + Y+ LI   C    +S A   F  M+K G  PD  TY +L++  CK+G ++ 
Sbjct: 464 KGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVES 523

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI-- 407
           A   +  + K GV PD ++Y  +I GL      ++A++ L  +  +  +P    ++ +  
Sbjct: 524 ALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMH 583

Query: 408 -------------IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
                        + G+   G ++ A  +   ML    + +   ++ LI    R G++  
Sbjct: 584 CCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMK 643

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A S  K+ML  G  P+  +   LI      G +  A Q+  ++L      D      LI 
Sbjct: 644 ALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALID 703

Query: 515 GHCARGNMKEAEEVFAKIQTLGL 537
            +   GN+    +V   +   GL
Sbjct: 704 LNLNEGNVDAVLDVLHGMAKDGL 726



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 139/300 (46%), Gaps = 12/300 (4%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  +I   C      +A  L ++M++KG +PD +T++ L+  LC    L  A 
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAH 490

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + + M ++   P+  TY + I G+C+   ++ AL L   M   G+ P+ VT+++L++ L
Sbjct: 491 VLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGL 550

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATS------------DVITSTILMDSYFKNGDKFQAL 281
            K     +A + L ++  +D   A +            ++ +   L+  +   G   +A 
Sbjct: 551 SKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEAD 610

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            ++  M  +N   D   Y+VLI+G C  G++  A ++  QML+ GF P+  +  +L+  L
Sbjct: 611 KVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGL 670

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
            + G + EA      L       D  + K +I      G++    + L  M +  ++P P
Sbjct: 671 FENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPSP 730


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 243/496 (48%), Gaps = 44/496 (8%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + ++I   C  GK   A  L  +M+  G   DV T + L++ LCK G + +A+ ++
Sbjct: 155 DVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELL 214

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M +     +  TY+  I G C  + + +A  LF +M   G RP+ + +  L+  LC+ 
Sbjct: 215 EVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQT 274

Query: 237 GLLGDAVKFLGEVLADDDG---KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           G +  A++   E+L D      K    +I+ +I++D   K+  + +A  L+ +M  + I 
Sbjct: 275 GNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIM 334

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+++Y  LI+GFCL+G    A   F +ML  G  PDV T + L++ LCK+GK+ EA+  
Sbjct: 335 PDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKL 394

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP-------------- 399
             V+ + G  PD ++  T+++GLC+   I KA +  L M +   +P              
Sbjct: 395 LEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 454

Query: 400 -------------------------EPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
                                    +P+   +++IIDG  +CG    A  +   M + GV
Sbjct: 455 SGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 514

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +V ++ +LI    R G   DA  L  EM+  G+ PDV T+++LI   C  G +  A +
Sbjct: 515 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 574

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           L + M++RG  P+ +TYT L+KG C    + EA ++F K+Q LG   D + +  L K   
Sbjct: 575 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 634

Query: 553 RMKESDKARDIHQKWL 568
           +      A ++H+K L
Sbjct: 635 QTGNIKTALELHKKML 650



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 221/426 (51%), Gaps = 11/426 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I   CL GK   A  L  +M+  G  PDV T + L++ LCK G + +A+ ++
Sbjct: 336 DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLL 395

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             + +    P+  T    + G C  + + KA  LF  M   G  PN VT   L+  LC+ 
Sbjct: 396 EVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQS 455

Query: 237 GLLGDAVKFLGEVLADDDG---KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           G +  A++    +L+D          + I+ +I++D   K G + +A  L+ +M    + 
Sbjct: 456 GNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVI 515

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+++Y  LI+GFC +G    A   F +M+  G  PDV T++ L++ LCK+GK+ EA+  
Sbjct: 516 PDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANEL 575

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             V+ + G  P+ ++Y T+++GLC++  I +A +  + M +   +P+   +  ++ G  +
Sbjct: 576 LEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 635

Query: 414 CGDLSNAFSIRDLMLS----FGVS--SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
            G++  A  +   MLS    +G +   +V +++ +I    + G   +A  L KEM   G+
Sbjct: 636 TGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGV 695

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            P+V +Y  LI   C  G +  A  L++EM+ +G+  + +TY+ +I G C  G + +A  
Sbjct: 696 IPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA-- 753

Query: 528 VFAKIQ 533
           +F K++
Sbjct: 754 LFQKME 759



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 234/488 (47%), Gaps = 50/488 (10%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQK------GTVPDVLTHNYLVNELCKIGDLEKADHVI 176
            +++ LC  G I TAL L ++M+           P +++++ +++ LCK    ++A  + 
Sbjct: 266 TLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF 325

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           +EM      P+  +Y   I G+C   + +KA  LF+ M + GI+P+  T ++L+  LCKK
Sbjct: 326 KEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKK 385

Query: 237 GLLGDAVKFL--------------------GEVLADDDGKATS------------DVITS 264
           G + +A K L                    G  +     KAT             +V+T 
Sbjct: 386 GKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTC 445

Query: 265 TILMDSYFKNGDKFQALALWNDMFQK------NIQTDIVAYNVLINGFCLNGDISSAFAY 318
             LM    ++G+   AL L  +M         N + + ++Y+++I+G C  G    A   
Sbjct: 446 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 505

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           F +M   G +PDVI+Y +L++  C+ GK  +A + +  +   GV PD  ++  +I  LC 
Sbjct: 506 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 565

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G +++A E L  M+++  +P    +  ++ G      +S A  +   M   G   +V T
Sbjct: 566 EGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVT 625

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLD------GIFPDVFTYNLLIGASCNLGHIHLALQ 492
           +  L+    + G+I  A  L K+ML D         PDV +Y+++I   C  G    A +
Sbjct: 626 YGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARE 685

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           L+ EM   G+ P++I+YT LI G C  G +++A+ +F ++   G+ ++ + + ++   + 
Sbjct: 686 LFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFC 745

Query: 553 RMKESDKA 560
           +  + DKA
Sbjct: 746 KEGQIDKA 753



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 236/467 (50%), Gaps = 15/467 (3%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D      +I   C  GK+  A  L   M+Q+G + D++T++ L+  LC    + +A 
Sbjct: 6   IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEAT 65

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN----GI--RPNRVTHN 227
            +   M ++   P+   Y   + G C+  +++ ALHL   M N+    GI  +P  V+++
Sbjct: 66  QLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYS 125

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           I++  LCK     +A +   E+ A        DVI+ T L+  + ++G   +A  L+N+M
Sbjct: 126 IIIDGLCKDRREDEARELFKEMKAQG---MMPDVISYTSLIHGFCRSGKWEKAKCLFNEM 182

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
               I++D+   ++LI+  C  G +  A      M++RG + D++TY+TL+  LC + ++
Sbjct: 183 LDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRI 242

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS----VVPEPHI 403
            EA+  +  + K G  PD I+Y T+++GLC  G+I  A +    ML  +    +  +P +
Sbjct: 243 SEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTL 302

Query: 404 --WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +++IIDG  +      A  +   M + G+  +V ++  LI      G    A  L  E
Sbjct: 303 ISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 362

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           ML  GI PDV T ++LI   C  G +  A +L + +++RG  PD++T T L+KG C +  
Sbjct: 363 MLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHR 422

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           + +A ++F K+Q LG   + +    L K   +      A ++H+  L
Sbjct: 423 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNML 469



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 221/500 (44%), Gaps = 56/500 (11%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I+ LC+  +I  A  L   M + G  PD + +  L+  LC+ G++  A  + 
Sbjct: 225 DIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLH 284

Query: 177 REMSE------MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +EM        ++  P   +Y+  I G C+    D+A  LF  M   GI P+ +++  L+
Sbjct: 285 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLI 344

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           H  C  G    A     E+L   D     DV TS++L+D   K G   +A  L   + Q+
Sbjct: 345 HGFCLSGKWEKAKCLFNEML---DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQR 401

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL------------ 338
               D+V    L+ G C+   IS A   F +M K G +P+V+T  TL+            
Sbjct: 402 GCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIA 461

Query: 339 ----------------NC-------------LCKQGKLDEASHFYGVLSKTGVAPDQISY 369
                           NC             LCK G+ DEA   +  +   GV PD ISY
Sbjct: 462 LELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISY 521

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            ++I G C  G    A+     M++  V P+   ++V+ID   + G +  A  + ++M+ 
Sbjct: 522 TSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQ 581

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G   N  T+  L+        I +A  L  +M   G  PDV TY  L+   C  G+I  
Sbjct: 582 RGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKT 641

Query: 490 ALQLYDEMLR------RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           AL+L+ +ML           PD+I+Y+ +I G C  G   EA E+F +++ LG+  + I 
Sbjct: 642 ALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVIS 701

Query: 544 FRILKKRYRRMKESDKARDI 563
           +  L   + R  + + A+ +
Sbjct: 702 YTSLIHGFCRSGKLEDAKHL 721



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 147/288 (51%), Gaps = 6/288 (2%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M    IQ D+    VLI+ FC  G +  A      M++RG + D++TY+TL+  LC + +
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA----REFLLSMLEKSVVPEPH 402
           + EA+  +  + K G  PD I+Y T+++GLC  G I  A    +E L    +  +  +P 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 403 I--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
           +  +++IIDG  +      A  +   M + G+  +V ++ +LI    R G    A  L  
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           EML  GI  DV T ++LI   C  G +  A +L + M++RG   DI+TY+ LIKG C + 
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            + EA  +F  +Q LG   D I +  L K   +    + A  +HQ+ L
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEML 288



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 141/288 (48%), Gaps = 9/288 (3%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           + DT P     + +   +  +I  LC  G+   A  L ++M   G +PDV+++  L++  
Sbjct: 469 LSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 528

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           C+ G  + A ++  EM ++   P+  T++  I   C+  ++ +A  L   M   G  PN 
Sbjct: 529 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNT 588

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           VT+  LV  LC    + +A +   ++          DV+T   LM    + G+   AL L
Sbjct: 589 VTYTTLVKGLCMNDRISEATQLFMKM---QKLGCLPDVVTYGTLMKGLCQTGNIKTALEL 645

Query: 284 WNDM------FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
              M      +  N + D+++Y+++I+G C +G    A   F +M   G +P+VI+Y +L
Sbjct: 646 HKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSL 705

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           ++  C+ GKL++A H +  +   GV  + ++Y  +I G C  G I KA
Sbjct: 706 IHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 2/116 (1%)

Query: 102 KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           K + DTG      + D   +  +I  LC  G+   A  L ++M   G +P+V+++  L++
Sbjct: 648 KMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIH 707

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
             C+ G LE A H+  EM +     N  TY+  I G+C+  ++DKA  LF  M  N
Sbjct: 708 GFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 761


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 238/473 (50%), Gaps = 7/473 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E LD ++ M   G  RC+   D      VI      G++  A  L  +M+QKG VPDV 
Sbjct: 212 QEALDMVQRMAKEGG-RCS--PDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVG 268

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+N +V+ LCK   ++KA+ V+R+M +    P+  TYNA I GY       ++  +F  M
Sbjct: 269 TYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKM 328

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            + G+ P+ VT +  + +LCK G   DA +    +          D+++ +IL+  Y   
Sbjct: 329 TSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGH---MPDIVSYSILLHGYATE 385

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G       L++ M  K I ++    N+LI+     G +  A   F +M  +G  P+V+TY
Sbjct: 386 GRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTY 445

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           +TL++  C+ G+L +A   +  +   G+ P+   Y ++I G C+HGD+VKA+EF+  M+ 
Sbjct: 446 STLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMS 505

Query: 395 KSV-VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           K +  P    ++ II      G + +A  + +L++  G    + TFN+LI      G + 
Sbjct: 506 KGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKME 565

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            AF +   M+  GI PDV T N L+   C  G I   L L+ EML + + P  +TY  ++
Sbjct: 566 KAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVL 625

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            G    G    A+++F ++   G A+D   ++IL K   R   +D+A  +  K
Sbjct: 626 DGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHK 678



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 182/357 (50%), Gaps = 8/357 (2%)

Query: 192 NAFITGYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
             F+   C     D+A+  L   M+     P+ +++N ++ +LC      +A+  + + +
Sbjct: 163 TTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMV-QRM 221

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
           A + G+ + DV++   ++  +FK G+  +A  L+N+M QK +  D+  YN +++  C   
Sbjct: 222 AKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKAR 281

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A     QM+ +G  PD +TYN +++     G   E++  +  ++  G+ PD +++ 
Sbjct: 282 AMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFS 341

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY---GRCGDLSNAFSIRDLM 427
           + +  LC HG    A E    M  K  +P+   +++++ GY   GR  D++N F     M
Sbjct: 342 SFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLF---HSM 398

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              G+ SN    N LI A  + G + +A  +  EM   G+ P+V TY+ LI A C +G +
Sbjct: 399 ADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRL 458

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
             A++ + +M+  GI P+   Y  LI G C  G++ +A+E  +++ + GL   +I F
Sbjct: 459 ADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVF 515



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 206/448 (45%), Gaps = 12/448 (2%)

Query: 120 RHVAVIRDLCLGGK---IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHV 175
           R   ++ D C   +   +G A   R  +++ G     +     +  LC     ++A D +
Sbjct: 125 RTYGILMDCCCRARRPDLGPAFVAR--LLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVL 182

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR--PNRVTHNILVHAL 233
           +  MSE+   P+  +YN  I   C  +   +AL +   MA  G R  P+ V+ N ++H  
Sbjct: 183 LHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 242

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K+G +  A     E++         DV T   ++D+  K     +A  +   M  K ++
Sbjct: 243 FKQGEVSKACNLFNEMVQKG---VVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVE 299

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D V YN +I+G+  +G    +   F +M  +G +PD +T+++ ++ LCK G+  +A   
Sbjct: 300 PDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEI 359

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  ++  G  PD +SY  ++ G    G          SM +K +V   H  N++I  + +
Sbjct: 360 FQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAK 419

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G +  A  +   M   GV  NV T++ LI A  R G + DA     +M+  GI P+   
Sbjct: 420 RGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAV 479

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGI-TPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           Y+ LI   C  G +  A +   EM+ +G+  P+I+ ++ +I   C  G + +A++VF  +
Sbjct: 480 YHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLV 539

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKA 560
             +G     + F  L   Y  + + +KA
Sbjct: 540 IHIGDRPTIVTFNSLIDGYCLVGKMEKA 567



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 180/393 (45%), Gaps = 2/393 (0%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L   M  KG V +    N L++   K G +++A  V  EM      PN  TY+  I+ +C
Sbjct: 394 LFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFC 453

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R+  L  A+  FS M + GI PN   ++ L+H  C  G L  A +F+ E+++   G    
Sbjct: 454 RMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSK--GLHRP 511

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +++  + ++ S    G    A  ++N +     +  IV +N LI+G+CL G +  AF   
Sbjct: 512 NIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVL 571

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M+  G  PDV+T NTL++  CK GK+D+    +  +    V P  ++Y  ++ GL   
Sbjct: 572 DAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRA 631

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G    A++    M++     +   + +++ G  R      A ++   + +     ++   
Sbjct: 632 GRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITIL 691

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N +I A  +     +A  L   +   G+ P+V TY ++I      G +  A  ++  M +
Sbjct: 692 NTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEK 751

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            G  P      ++I+    +G++ +A    +K+
Sbjct: 752 SGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKV 784



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 134/267 (50%), Gaps = 3/267 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC+ G++  A  +   +I  G  P ++T N L++  C +G +EKA  V+  M  +
Sbjct: 518 SIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSV 577

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  T N  ++GYC+  ++D  L LF  M +  ++P  VT+NI++  L + G    A
Sbjct: 578 GIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAA 637

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   E++  D G A  D+ T  IL+    +N    +A+ L++ +   + + DI   N +
Sbjct: 638 KKMFHEMI--DSGTAV-DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTM 694

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           IN          A   F  +   G +P+V TY  ++  L K+G ++EA   +  + K+G 
Sbjct: 695 INALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGC 754

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFL 389
           AP       II+ L   GDIVKA  ++
Sbjct: 755 APSSRLLNDIIRMLLQKGDIVKAGYYM 781



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 150/328 (45%), Gaps = 9/328 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT-VPD 152
           L + +++   M   G     +E +   + ++I   C+ G +  A     +M+ KG   P+
Sbjct: 458 LADAMEKFSQMISIG-----IEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPN 512

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           ++  + +++ LC  G +  A  V   +  +   P   T+N+ I GYC V +++KA  +  
Sbjct: 513 IVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLD 572

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M + GI P+ VT+N LV   CK G + D +    E+L     K     +T  I++D   
Sbjct: 573 AMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHK---KVKPTTVTYNIVLDGLL 629

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           + G    A  ++++M       DI  Y +L+ G C N     A   F ++       D+ 
Sbjct: 630 RAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDIT 689

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
             NT++N L K  + +EA+  +  +S +G+ P+  +Y  +I+ L   G + +A     SM
Sbjct: 690 ILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSM 749

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            +    P   + N II    + GD+  A
Sbjct: 750 EKSGCAPSSRLLNDIIRMLLQKGDIVKA 777



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/362 (22%), Positives = 152/362 (41%), Gaps = 18/362 (4%)

Query: 193 AFITGYCRVNE----LDKALHLFSTMANNGIRPNRVTHNILVHAL--------CKKGLLG 240
           AF+    RV       D A HLF  +   G   +  + N  + AL        C  G   
Sbjct: 43  AFVAAIARVRAGTFCTDDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGP-A 101

Query: 241 DAVKFLGEVLADDDGKATSDVITST--ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
             +     +  ++ G   + +   T  ILMD   +        A    + +  ++T  + 
Sbjct: 102 LVLALFNRICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQ 161

Query: 299 YNVLINGFCLNGDISSAF-AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
               +   C       A      +M +   +PD I+YNT++  LC   +  EA      +
Sbjct: 162 ATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRM 221

Query: 358 SKTG--VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
           +K G   +PD +S+ T+I G    G++ KA      M++K VVP+   +N I+D   +  
Sbjct: 222 AKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKAR 281

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            +  A  +   M+  GV  +  T+NA+I   +  G   ++  + ++M   G+ PD  T++
Sbjct: 282 AMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFS 341

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
             + + C  G    A +++  M  +G  PDI++Y+ L+ G+   G   +   +F  +   
Sbjct: 342 SFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADK 401

Query: 536 GL 537
           G+
Sbjct: 402 GI 403



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 4/154 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ LC       A+ L  K+       D+   N ++N L K+   E+A+ +   +S   
Sbjct: 659 LLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSG 718

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN +TY   I    +   +++A  +FS+M  +G  P+    N ++  L +K   GD V
Sbjct: 719 LVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQK---GDIV 775

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           K  G  ++  DG   S   ++T L+ S F +  K
Sbjct: 776 K-AGYYMSKVDGTIISLEASTTSLLMSLFSSKGK 808


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 204/389 (52%), Gaps = 3/389 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G  P+V T+N L+  LC  G  ++A  ++R+M      PN  TYN  +  + R  E
Sbjct: 141 MLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGE 200

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A  L   M + G++PN VT N +V+ +CK G + DA K   E++ +       D ++
Sbjct: 201 VDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREG---LAPDGVS 257

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              L+  Y K G   +AL+++ +M QK I  D+V +  LI+  C  G++  A     QM 
Sbjct: 258 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMR 317

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           +RG   + +T+  L++  CK+G LD+A      + +  + P  + Y  +I G C+ G + 
Sbjct: 318 ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMD 377

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +ARE L  M  K + P+   ++ II  Y +  D  +AF +   ML  GV  +  T+++LI
Sbjct: 378 EARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 437

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                   + DA  L K M+  G+ PD FTY  LI   C  G++  AL L+D+M++ G+ 
Sbjct: 438 RVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVL 497

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKI 532
           PD++TY+ LI G        EA+++  K+
Sbjct: 498 PDVVTYSVLINGLSKSARAMEAQQLLFKL 526



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 234/508 (46%), Gaps = 33/508 (6%)

Query: 54  NDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAVFNALDLIL------KENLDRLKTMRDT 107
           N ++  + D   +  R +F +  SD        +N L   L      KE L  L+ MR  
Sbjct: 120 NAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGA 179

Query: 108 G--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCK 165
           G  P   T  T       ++      G++  A  L   M+  G  P+++T N +VN +CK
Sbjct: 180 GCGPNVVTYNT-------LVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232

Query: 166 IGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
            G +E A  V  EM     +P+  +YN  + GYC+     +AL +F+ M   GI P+ VT
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
              L+H +CK G L  AV  + ++   + G   ++V T T L+D + K G    AL    
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQM--RERGLQMNEV-TFTALIDGFCKKGFLDDALLAVR 349

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M Q  I+  +V YN LING+C+ G +  A     +M  +G  PDV+TY+T+++  CK  
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
               A      + + GV PD I+Y ++I+ LC    +  A     +M++  + P+   + 
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            +IDG+ + G++  A S+ D M+  GV  +V T++ LI   ++     +A  L  ++  +
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 529

Query: 466 GIFPDVFTYN---------------LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
              P    Y+                L+   C  G ++ A ++Y  ML R    D   Y+
Sbjct: 530 EPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYS 589

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            LI GHC  GN+ +A     ++   G A
Sbjct: 590 VLIHGHCRAGNVMKALSFHKQMLQRGFA 617



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 191/383 (49%), Gaps = 4/383 (1%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+   YNA +      + L  A   F +M ++G+ PN  T+NIL+ ALC +G   +A+  
Sbjct: 114 PSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L ++     G    +V+T   L+ ++F+ G+   A  L   M    ++ ++V +N ++NG
Sbjct: 173 LRDMRGAGCGP---NVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C  G +  A   F +M++ G  PD ++YNTL+   CK G   EA   +  +++ G+ PD
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            +++ ++I  +C  G++  A   +  M E+ +      +  +IDG+ + G L +A     
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M    +  +V  +NALI      G + +A  L  EM   G+ PDV TY+ +I A C   
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
             H A +L  +ML +G+ PD ITY+ LI+  C    + +A  +F  +  LGL  D   + 
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469

Query: 546 ILKKRYRRMKESDKARDIHQKWL 568
            L   + +    ++A  +H K +
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMV 492



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 201/443 (45%), Gaps = 18/443 (4%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  L  D   +  ++   C  G    AL +  +M QKG +PDV+T   L++ +CK G+L
Sbjct: 247 MREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNL 306

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E A  ++R+M E     N  T+ A I G+C+   LD AL     M    I+P+ V +N L
Sbjct: 307 EWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNAL 366

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           ++  C  G + +A + L E+ A        DV+T + ++ +Y KN D   A  L   M +
Sbjct: 367 INGYCMVGRMDEARELLHEMEAKG---LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLE 423

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K +  D + Y+ LI   C    +S A   F  M+K G  PD  TY +L++  CK+G ++ 
Sbjct: 424 KGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVER 483

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI-- 407
           A   +  + K GV PD ++Y  +I GL      ++A++ L  +  +  +P    ++ +  
Sbjct: 484 ALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMH 543

Query: 408 -------------IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
                        + G+   G ++ A  +   ML    + +   ++ LI    R G++  
Sbjct: 544 CCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMK 603

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A S  K+ML  G  P+  +   LI      G +  A Q+  ++L      D      LI 
Sbjct: 604 ALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALID 663

Query: 515 GHCARGNMKEAEEVFAKIQTLGL 537
            +   GN+    +V   +   GL
Sbjct: 664 LNLNEGNVDAVLDVLHGMAKDGL 686



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 142/300 (47%), Gaps = 12/300 (4%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  +I   C      +A  L ++M++KG +PD +T++ L+  LC+   L  A 
Sbjct: 391 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAH 450

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + + M ++   P+  TY + I G+C+   +++AL L   M   G+ P+ VT+++L++ L
Sbjct: 451 VLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGL 510

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATS------------DVITSTILMDSYFKNGDKFQAL 281
            K     +A + L ++  ++   A +            ++ +   L+  +   G   +A 
Sbjct: 511 SKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEAD 570

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            ++  M  +N   D   Y+VLI+G C  G++  A ++  QML+RGF P+  +  +L+  L
Sbjct: 571 KVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGL 630

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
            + G + EA      L       D  + K +I      G++    + L  M +  ++P P
Sbjct: 631 FENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPSP 690



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 36/168 (21%)

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G   +V  +NA++LA +   S+  A      ML DG+ P+V+TYN+LI A C  GH   A
Sbjct: 111 GYVPSVLAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 491 L-----------------------------------QLYDEMLRRGITPDIITYTELIKG 515
           L                                   +L   ML  G+ P+++T+  ++ G
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            C  G M++A +VF ++   GLA D + +  L   Y +   S +A  +
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSV 277


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 209/417 (50%), Gaps = 3/417 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           G K+     +  +M+ +G  PDV T N L+  LC+   +  A  ++ EM     SP+  T
Sbjct: 189 GNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKT 248

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           +   + G+     ++ AL +   M   G   + VT N+LVH  CK+G + + + F+ E+ 
Sbjct: 249 FTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEM- 307

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             ++G    D  T   L++   + G    AL + + M Q+    DI  YN LI G C  G
Sbjct: 308 -SNEG-FRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLG 365

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           ++  A     QM+ R F P+ +TYNTL++ LCK+ +++EA+    VL+  G+ PD  ++ 
Sbjct: 366 EVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 425

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           ++IQGLC+  +   A E    M  K   P+   +N++ID     G L  A S+   M S 
Sbjct: 426 SLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESS 485

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G S NV T+N LI    +   I +A  +  EM L GI  +V TYN LI   C    +  A
Sbjct: 486 GCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEA 545

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            QL D+ML  G+ PD  TY  L+   C  G++K+A ++   + + G   D + +  L
Sbjct: 546 AQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTL 602



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 211/428 (49%), Gaps = 4/428 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++   C  G+I   L    +M  +G  PD  T N LVN LC+IG ++ A  ++  M + 
Sbjct: 286 VLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQE 345

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN+ I G C++ E+++A+ + + M      PN VT+N L+  LCK+  + +A
Sbjct: 346 GFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEA 405

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L  VL         DV T   L+       +   A+ L+ +M  K    D   YN+L
Sbjct: 406 TE-LARVLTSKG--ILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNML 462

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+  C  G +  A +   +M   G   +V+TYNTL++  CK  +++EA   +  +   G+
Sbjct: 463 IDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGI 522

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           + + ++Y T+I GLC +  + +A + +  ML + + P+   +N ++  + R GD+  A  
Sbjct: 523 SRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAAD 582

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I   M S G   +  T+  LIL  ++ G +  A  L + + L G+     TYN +I A  
Sbjct: 583 IVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALF 642

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN-MKEAEEVFAKIQTLGLAIDH 541
                  A++L+ EM+ +G  PD +TY  + +G C+ G  + EA +   ++   G   D 
Sbjct: 643 REKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDF 702

Query: 542 IPFRILKK 549
             F +L +
Sbjct: 703 SSFLMLAE 710



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 201/398 (50%), Gaps = 6/398 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  LC  G +  AL +   M+Q+G  PD+ T+N L+  LCK+G++E+A  ++ +M   
Sbjct: 321 SLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILR 380

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SPN  TYN  I+  C+ N++++A  L   + + GI P+  T N L+  LC    L + 
Sbjct: 381 DFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC----LTNN 436

Query: 243 VKFLGEVLADDDGKAT-SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
            +   E+  +   K    D  T  +L+DS    G   +AL+L  +M       ++V YN 
Sbjct: 437 HRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNT 496

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LI+GFC N  I  A   F +M  +G   +V+TYNTL++ LCK  +++EA+     +   G
Sbjct: 497 LIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEG 556

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD+ +Y +++   C  GDI KA + + +M      P+   +  +I G  + G +  A 
Sbjct: 557 LKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELAS 616

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   +   G+     T+N +I A  R     +A  L +EM+  G  PD  TY ++    
Sbjct: 617 RLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGL 676

Query: 482 CNLG-HIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
           C+ G  I  A+    EM  +G  PD  ++  L +G CA
Sbjct: 677 CSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCA 714



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 203/440 (46%), Gaps = 6/440 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC   +I  A+ +  +M   G  PD  T   L+    + G++  A  +  +M    
Sbjct: 217 LIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAG 276

Query: 184 -PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
            PS N  T N  + GYC+   +++ L     M+N G RP+R T N LV+ LC+ G +  A
Sbjct: 277 CPSSN-VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHA 335

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++ L  +L +       D+ T   L+    K G+  +A+ + N M  ++   + V YN L
Sbjct: 336 LEILDVMLQEG---FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTL 392

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+  C    +  A      +  +G LPDV T+N+L+  LC       A   +  +   G 
Sbjct: 393 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGC 452

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD+ +Y  +I  LC  G + +A   L  M           +N +IDG+ +   +  A  
Sbjct: 453 HPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEE 512

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I D M   G+S NV T+N LI    +   + +A  L  +ML++G+ PD FTYN L+   C
Sbjct: 513 IFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFC 572

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G I  A  +   M   G  PD +TY  LI G    G ++ A  +   +Q  G+ +   
Sbjct: 573 RAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQ 632

Query: 543 PFR-ILKKRYRRMKESDKAR 561
            +  ++K  +R  + S+  R
Sbjct: 633 TYNPVIKALFREKRTSEAVR 652



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 200/422 (47%), Gaps = 20/422 (4%)

Query: 81  GNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWL 140
           G+ +     LD++L+E  D                 D   + ++I  LC  G++  A+ +
Sbjct: 330 GHVKHALEILDVMLQEGFD----------------PDIFTYNSLIFGLCKLGEVEEAVEI 373

Query: 141 RRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCR 200
             +MI +   P+ +T+N L++ LCK   +E+A  + R ++     P+  T+N+ I G C 
Sbjct: 374 LNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 433

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
            N    A+ LF  M   G  P+  T+N+L+ +LC +G L +A+  L E+   +    + +
Sbjct: 434 TNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEM---ESSGCSRN 490

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           V+T   L+D + KN    +A  ++++M  + I  ++V YN LI+G C N  +  A     
Sbjct: 491 VVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMD 550

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           QML  G  PD  TYN+LL   C+ G + +A+     ++  G  PD ++Y T+I GL   G
Sbjct: 551 QMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAG 610

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            +  A   L ++  K +V  P  +N +I    R    S A  +   M+  G   +  T+ 
Sbjct: 611 RVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYK 670

Query: 441 ALILAE-TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
            +     + GG I +A     EM   G  PD  ++ +L    C L      ++L + +++
Sbjct: 671 VVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMK 730

Query: 500 RG 501
           + 
Sbjct: 731 QA 732



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 212/443 (47%), Gaps = 7/443 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE-M 182
           V+R L   G  G+   + ++M   G      T   L+    K    ++A  V+  M E  
Sbjct: 111 VLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEF 170

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +  TYN  +      N+L     + S M + GI+P+  T NIL+ ALC+   +  A
Sbjct: 171 GLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPA 230

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  + E+        + D  T T LM  + + G+   AL +   M      +  V  NVL
Sbjct: 231 ILMMEEM---GSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVL 287

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+C  G I    ++  +M   GF PD  T+N+L+N LC+ G +  A     V+ + G 
Sbjct: 288 VHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGF 347

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  +Y ++I GLC  G++ +A E L  M+ +   P    +N +I    +   +  A  
Sbjct: 348 DPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATE 407

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +  ++ S G+  +V TFN+LI       +   A  L +EM   G  PD FTYN+LI + C
Sbjct: 408 LARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLC 467

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           + G +  AL L  EM   G + +++TY  LI G C    ++EAEE+F +++  G++ + +
Sbjct: 468 SRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVV 527

Query: 543 PFRILKK---RYRRMKESDKARD 562
            +  L     + RR++E+ +  D
Sbjct: 528 TYNTLIDGLCKNRRVEEAAQLMD 550



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 202/427 (47%), Gaps = 6/427 (1%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           Q   VP  + +  ++ +L K G       V++EM          T+   I  Y +    D
Sbjct: 98  QPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFD 157

Query: 206 KALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVIT 263
           +A+ +   M    G++ +  T+N L++ L      G+ +K +  V +    +    DV T
Sbjct: 158 EAVAVVDIMEEEFGLKLDAFTYNFLLNVLVD----GNKLKLVEIVNSRMVSRGIKPDVTT 213

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             IL+ +  +      A+ +  +M    +  D   +  L+ GF   G+++ A     QM+
Sbjct: 214 FNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMV 273

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G     +T N L++  CK+G+++E   F   +S  G  PD+ ++ +++ GLC  G + 
Sbjct: 274 AAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVK 333

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A E L  ML++   P+   +N +I G  + G++  A  I + M+    S N  T+N LI
Sbjct: 334 HALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLI 393

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               +   + +A  L + +   GI PDV T+N LI   C   +  LA++L++EM  +G  
Sbjct: 394 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCH 453

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PD  TY  LI   C+RG ++EA  +  ++++ G + + + +  L   + + K  ++A +I
Sbjct: 454 PDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEI 513

Query: 564 HQKWLLR 570
             +  L+
Sbjct: 514 FDEMELQ 520



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 133/313 (42%), Gaps = 6/313 (1%)

Query: 263 TSTILMDSYFKNGDKFQALAL--WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           T   L D+  +  D+   L L  W    Q N     V Y  ++     +G   S      
Sbjct: 71  TPKQLRDALRRQSDEDSILDLLDWASK-QPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQ 129

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT-GVAPDQISYKTIIQGLCIH 379
           +M   G      T+  L+    K    DEA     ++ +  G+  D  +Y  ++  L + 
Sbjct: 130 EMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVL-VD 188

Query: 380 GDIVKAREFLLS-MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
           G+ +K  E + S M+ + + P+   +N++I    R   +  A  + + M S+G+S +  T
Sbjct: 189 GNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKT 248

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           F  L+      G++  A  ++++M+  G      T N+L+   C  G I   L   DEM 
Sbjct: 249 FTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMS 308

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             G  PD  T+  L+ G C  G++K A E+   +   G   D   +  L     ++ E +
Sbjct: 309 NEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVE 368

Query: 559 KARDIHQKWLLRN 571
           +A +I  + +LR+
Sbjct: 369 EAVEILNQMILRD 381


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/427 (30%), Positives = 214/427 (50%), Gaps = 39/427 (9%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  LC GG++  A  L  +MI+ G  PDV+T+N L++  CK+G+L++A  +     + 
Sbjct: 15  ALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKR 74

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL--- 239
              P+  TYNA I G+C+ ++LD+A  +   M +  + P+ VT+N LV+ LCK G +   
Sbjct: 75  GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEA 134

Query: 240 ------------------------------GDAVKFLGEVLADDDGKATSDVITSTILMD 269
                                          +A+K  G VL         +V T  IL+D
Sbjct: 135 RMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQG---YEPEVPTYNILID 191

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K     +A  L++ + +  ++ D + Y V I+G C  G +  A      M ++G +P
Sbjct: 192 GLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVP 251

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           DV+++N ++N LCK+ ++DEA      +   G +P+ IS+ T+I G C  G   KA    
Sbjct: 252 DVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTF 311

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRC---GDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             ML++ V P    +N+++DG  +    G +  A ++ D M+  G   +V T++ALI   
Sbjct: 312 KEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGL 371

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G + DA  L   M   G  P+V+TYN LI   C L  +  AL+L+  M+ +G  PD 
Sbjct: 372 GKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDT 431

Query: 507 ITYTELI 513
           ITY  +I
Sbjct: 432 ITYGTII 438



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/398 (33%), Positives = 208/398 (52%), Gaps = 12/398 (3%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M + G  P+ +T+N L++ LC  G +  A  +   M +   SP+  TYN  + G+C+V E
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           LD+AL +F      G  P+ VT+N L++  CK   L +A + L  +++++      DV+T
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSEN---LVPDVVT 117

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC--LNGDISSAFAYFCQ 321
              L++   KNG   +A  L  D   K    +++ Y+ LI+G C  L G +S A   F  
Sbjct: 118 YNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRG-VSEALKLFGS 173

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           +LK+G+ P+V TYN L++ L K+ +++EA   +  L K G+ PD I+Y   I GLC  G 
Sbjct: 174 VLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 233

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           +  A   L  M EK  VP+    N +I+G  +   +  A  +   M + G S N  +FN 
Sbjct: 234 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT 293

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL---GHIHLALQLYDEML 498
           LI  + R G    A +  KEML  G+ P V TYN+L+   C     G I  A+ L+D M+
Sbjct: 294 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 353

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            +G  PD++TY+ LI G    G + +A  +   ++  G
Sbjct: 354 EKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG 391



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 189/377 (50%), Gaps = 10/377 (2%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
           G V+     D   + A+I   C   K+  A  + ++M+ +  VPDV+T+N LVN LCK G
Sbjct: 70  GAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNG 129

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCR-VNELDKALHLFSTMANNGIRPNRVTH 226
            +++A  +I +      SPN  TY+  I+G CR +  + +AL LF ++   G  P   T+
Sbjct: 130 RVDEARMLIVDKGF---SPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTY 186

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           NIL+  L K+  + +A +    ++         D IT T+ +D   K G    AL +  D
Sbjct: 187 NILIDGLLKEDRVNEAFELFSGLVKHG---LEPDAITYTVFIDGLCKAGRVEDALLMLKD 243

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +K    D+V++N +ING C    +  A      M  +G  P+ I++NTL+   C+ GK
Sbjct: 244 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 303

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCI---HGDIVKAREFLLSMLEKSVVPEPHI 403
             +A   +  + K GV P  ++Y  ++ GLC     G I +A     +M+EK  VP+   
Sbjct: 304 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 363

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           ++ +IDG G+ G L +A  +   M + G   NV+T+N+LI        + +A  L   M+
Sbjct: 364 YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMV 423

Query: 464 LDGIFPDVFTYNLLIGA 480
             G  PD  TY  +I A
Sbjct: 424 EKGCVPDTITYGTIISA 440



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 179/352 (50%), Gaps = 15/352 (4%)

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  +G  PNR+T+N L+  LC  G + DA      ++       + DV+T   L+  + K
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMI---KAGYSPDVVTYNTLLHGFCK 57

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G+  +AL +++   ++    D+V YN LINGFC    +  A     +M+    +PDV+T
Sbjct: 58  VGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVT 117

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC--IHGDIVKAREFLLS 391
           YN+L+N LCK G++DEA      +   G +P+ I+Y T+I GLC  + G + +A +   S
Sbjct: 118 YNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRG-VSEALKLFGS 173

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           +L++   PE   +N++IDG  +   ++ AF +   ++  G+  +  T+   I    + G 
Sbjct: 174 VLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 233

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + DA  + K+M   G  PDV ++N +I   C    +  A  L   M  +G +P+ I++  
Sbjct: 234 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT 293

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL------KKRYRRMKES 557
           LI G C  G  K+A   F ++   G+    + + IL       ++  R+KE+
Sbjct: 294 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 345



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 142/287 (49%), Gaps = 39/287 (13%)

Query: 90  LDLILKENLDRLKTMRD--TGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           +D +LKE  DR+    +  +G V+  LE D   +   I  LC  G++  AL + + M +K
Sbjct: 190 IDGLLKE--DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 247

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VPDV++HN ++N LCK   +++A+ ++  M     SPN  ++N  I G CR  +  KA
Sbjct: 248 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 307

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           +  F  M   G++P  VT+NILV  LCK               A  +G+           
Sbjct: 308 MTTFKEMLKRGVKPTVVTYNILVDGLCK---------------ARQEGRIK--------- 343

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
                      +A+ L++ M +K    D+V Y+ LI+G    G +  A      M  +G 
Sbjct: 344 -----------EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGC 392

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           +P+V TYN+L++ LC   K+DEA   +  + + G  PD I+Y TII 
Sbjct: 393 IPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 70/135 (51%)

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M   G   N  T+NAL+     GG + DA +L + M+  G  PDV TYN L+   C +G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  AL+++D  ++RG  PD++TY  LI G C    + EA+ +  ++ +  L  D + +  
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 547 LKKRYRRMKESDKAR 561
           L     +    D+AR
Sbjct: 121 LVNGLCKNGRVDEAR 135



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 56/106 (52%)

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G +P+  TYN L+   CN G +  A  LY+ M++ G +PD++TY  L+ G C  G + EA
Sbjct: 5   GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEA 64

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            ++F      G   D + +  L   + +  + D+A+ I Q+ +  N
Sbjct: 65  LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSEN 110


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 229/511 (44%), Gaps = 72/511 (14%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++  A   + KM ++   P ++T+  L+N L K+   ++A+ +++EMS+  
Sbjct: 238 IIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRG 297

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN   YN  I GYCR+  +  AL +   M +NGI PN VT N L+   CK   +  A 
Sbjct: 298 YAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAE 357

Query: 244 KFLGEVLADDDGKATSDVITS---------------------------------TILMDS 270
             L E +    G       TS                                 T+L+  
Sbjct: 358 HLL-EEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSG 416

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             +NG + +A+ LW  + +K    + V  N LI+G C  G    A     +ML+RG + D
Sbjct: 417 LCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLD 476

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            I+YNTL+   CK+GK++E       + + G+ PD  +Y  ++ GLC  G I +A     
Sbjct: 477 SISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWH 536

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRC-----------------------------------G 415
              +    P+ + + ++IDGY +                                    G
Sbjct: 537 ECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENG 596

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
           ++  AF +RD M S G+     T+++LI   +  G +  A  L  EM  +G+ P+V  Y 
Sbjct: 597 NMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYT 656

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            LIG  C LG +H    +  EM    + P+ ITYT +I GHC  GNMK A ++  ++   
Sbjct: 657 ALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQK 716

Query: 536 GLAIDHIPFRILKKRY---RRMKESDKARDI 563
           G+  D + +  L   +    +M+E+ K  D+
Sbjct: 717 GIVPDAVTYNALTNGFCKEGKMEEALKVCDL 747



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 222/496 (44%), Gaps = 50/496 (10%)

Query: 87  FNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQ 146
           F+  + ILKE  DR        P      T       +I   C  G I TAL +R  MI 
Sbjct: 283 FDEANCILKEMSDR-----GYAPNNVVYNT-------LIDGYCRIGNISTALQIRDDMIS 330

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
            G  P+ +T N L+   CK   +E A+H++ EM       N  T+ + I   C     D 
Sbjct: 331 NGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDS 390

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           AL     M     +PN     +LV  LC+ G   +A++    +L  + G A ++ +TS  
Sbjct: 391 ALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLL--EKGFA-ANTVTSNA 447

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+    + G K +A  L  +M ++ +  D ++YN LI   C  G +   F    +M++RG
Sbjct: 448 LIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRG 507

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PD+ TYN LL+ LC  GK++EA   +    K G  PD  +Y  +I G C    + +  
Sbjct: 508 IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGE 567

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV-------------- 432
           +    M+   +     ++  +I  Y   G++  AF +RD M S G+              
Sbjct: 568 KLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGL 627

Query: 433 ---------------------SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
                                S NV  + ALI    + G +    S+ +EM ++ + P+ 
Sbjct: 628 SNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNK 687

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TY ++I   C LG++  A +L +EM ++GI PD +TY  L  G C  G M+EA +V   
Sbjct: 688 ITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDL 747

Query: 532 IQTLGLAIDHIPFRIL 547
           + T G+++D I +  L
Sbjct: 748 MSTGGISLDDITYTTL 763



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 212/434 (48%), Gaps = 3/434 (0%)

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
           G    L   +  KG  P + T N+L++ L K  +++ +  V   M     +P+   ++  
Sbjct: 144 GVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTM 203

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           +  +C    +D A+ LF  M   G+ PN VT+N ++H LCK G L +A +F  ++   + 
Sbjct: 204 VNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKM---EK 260

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
            +    ++T  +L++   K     +A  +  +M  +    + V YN LI+G+C  G+IS+
Sbjct: 261 ERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNIST 320

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A      M+  G  P+ +T N+L+   CK  +++ A H    +   G   +Q ++ ++I 
Sbjct: 321 ALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIH 380

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
            LC+      A  F++ ML ++  P   +  +++ G  + G  S A  +   +L  G ++
Sbjct: 381 RLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAA 440

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           N  T NALI      GS  +A  L KEML  G+  D  +YN LI A C  G +    +L 
Sbjct: 441 NTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLK 500

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           +EM+RRGI PD+ TY  L+ G C  G ++EA  ++ + +  G   D   + I+   Y + 
Sbjct: 501 EEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKA 560

Query: 555 KESDKARDIHQKWL 568
              ++   + Q+ +
Sbjct: 561 NRVEEGEKLFQEMV 574



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 177/392 (45%), Gaps = 38/392 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  GK   A+ L  ++++KG   + +T N L++ LC+ G  E+A  +++EM E  
Sbjct: 413 LVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERG 472

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  +YN  I   C+  ++++   L   M   GI+P+  T+N+L+H LC  G + +A 
Sbjct: 473 LVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAG 532

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E   + +     D  T  I++D Y K     +   L+ +M    I+ + V Y  LI
Sbjct: 533 GLWHECKKNGN---FPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLI 589

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
             +C NG++  AF     M  RG      TY++L++ L   G +D A+     + K G++
Sbjct: 590 RAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLS 649

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ + Y  +I G C  G + K    L  M   +V P    + ++I+G+ + G++      
Sbjct: 650 PNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMK----- 704

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
                                          A  L  EM   GI PD  TYN L    C 
Sbjct: 705 ------------------------------AAAKLLNEMAQKGIVPDAVTYNALTNGFCK 734

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            G +  AL++ D M   GI+ D ITYT LI G
Sbjct: 735 EGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 134/266 (50%), Gaps = 3/266 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR  ++ D   +  ++  LC  GKI  A  L  +  + G  PD  T+  +++  CK   +
Sbjct: 504 VRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRV 563

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E+ + + +EM  M+   N   Y   I  YC    + +A  L   M + GI     T++ L
Sbjct: 564 EEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSL 623

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +H L   GL+  A + L E+  +     + +V+  T L+  Y K G   +  ++  +M  
Sbjct: 624 IHGLSNIGLVDSANQLLDEMRKEG---LSPNVVCYTALIGGYCKLGQMHKVDSILQEMSI 680

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
            N+  + + Y ++ING C  G++ +A     +M ++G +PD +TYN L N  CK+GK++E
Sbjct: 681 NNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEE 740

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQG 375
           A     ++S  G++ D I+Y T+I G
Sbjct: 741 ALKVCDLMSTGGISLDDITYTTLIDG 766



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 149/319 (46%), Gaps = 8/319 (2%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E    LK M + G     L  D   +  +I   C  GK+     L+ +M+++G  PD+ 
Sbjct: 459 EEAAKLLKEMLERG-----LVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMY 513

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+N L++ LC +G +E+A  +  E  +    P+  TY   I GYC+ N +++   LF  M
Sbjct: 514 TYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEM 573

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
               I  N V +  L+ A C+ G + +A +   ++ +    + ++   T + L+      
Sbjct: 574 VTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSA---TYSSLIHGLSNI 630

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G    A  L ++M ++ +  ++V Y  LI G+C  G +    +   +M      P+ ITY
Sbjct: 631 GLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITY 690

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
             ++N  CK G +  A+     +++ G+ PD ++Y  +  G C  G + +A +    M  
Sbjct: 691 TIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMST 750

Query: 395 KSVVPEPHIWNVIIDGYGR 413
             +  +   +  +IDG+ +
Sbjct: 751 GGISLDDITYTTLIDGWHK 769



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 118/257 (45%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
            F  F  +  +G  P + T N LL+ L K  ++  +   + ++   GV PD   + T++ 
Sbjct: 146 VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVN 205

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
             C  G +  A E    M +  V P    +N II G  + G L  AF  ++ M    V  
Sbjct: 206 AFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKP 265

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           ++ T+  LI    +     +A  + KEM   G  P+   YN LI   C +G+I  ALQ+ 
Sbjct: 266 SLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIR 325

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           D+M+  GI+P+ +T   LI+G+C    M+ AE +  ++ T G  I+   F  +  R    
Sbjct: 326 DDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLK 385

Query: 555 KESDKARDIHQKWLLRN 571
              D A     + LLRN
Sbjct: 386 CRFDSALLFIMEMLLRN 402


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 208/427 (48%), Gaps = 3/427 (0%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           LRR        P+  ++N ++  + + G    A  V  EM+E    PN  TYN  I G+ 
Sbjct: 2   LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 61

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +  +L+    L   M  +G++PN +T+N+L+  LC+ G +G+    L E+ +    K   
Sbjct: 62  KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ---KMVP 118

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           D  T +IL D   +NGD    L+L+    +  +       ++L+NG C +G +S A    
Sbjct: 119 DGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL 178

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             ++  G +P  + YNTL+N  C+ G+L+ A   +G +    + PD I+Y  +I GLC  
Sbjct: 179 QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA 238

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
             I  A++ L+ M +  V P    +N +ID YGR G L   F +   M   G+  NV ++
Sbjct: 239 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 298

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
            +++ A  + G I +A ++  +M    + P+   YN +I A    G    A  L ++M  
Sbjct: 299 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 358

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            GI+P I+TY  LIKG C +  + EAEE+   +    L  D + +  L          DK
Sbjct: 359 NGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK 418

Query: 560 ARDIHQK 566
           A D+ Q+
Sbjct: 419 ALDLQQR 425



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 216/440 (49%), Gaps = 3/440 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           GG +     LR +M+  G  P+ +T+N L++ LC+ G + +   ++ EM+  +  P+  T
Sbjct: 63  GGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFT 122

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y+    G  R  +    L LF     NG+     T +IL++ LCK G +  A + L  ++
Sbjct: 123 YSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLV 182

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             + G   + VI +T L++ Y + G+   A + +  M  ++I+ D + YN LING C   
Sbjct: 183 --NAGLVPTRVIYNT-LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAE 239

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            I++A     +M   G  P V T+NTL++   + G+L++       + + G+ P+ +SY 
Sbjct: 240 RITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG 299

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           +I+   C +G I +A   L  M  K V+P   ++N IID Y   G    AF + + M S 
Sbjct: 300 SIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN 359

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+S ++ T+N LI        I +A  +   +    + PD  +YN LI A C  G+I  A
Sbjct: 360 GISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKA 419

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L L   M + GI   + TY +LI G    G + E E ++ K+    +   +    I+ + 
Sbjct: 420 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 479

Query: 551 YRRMKESDKARDIHQKWLLR 570
           Y +     KA D+ ++ L +
Sbjct: 480 YSKYGNEIKAEDLRKEMLQK 499



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 164/340 (48%), Gaps = 3/340 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  GK+  A  + + ++  G VP  + +N L+N  C+ G+LE A     +M    
Sbjct: 161 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 220

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYNA I G C+   +  A  L   M +NG+ P   T N L+ A  + G L    
Sbjct: 221 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 280

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E+    +     +V++   +++++ KNG   +A+A+ +DMF K++  +   YN +I
Sbjct: 281 IVLSEM---QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 337

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           + +  +G    AF    +M   G  P ++TYN L+  LC Q ++ EA      LS   + 
Sbjct: 338 DAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLI 397

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +SY T+I   C  G+I KA +    M +  +      ++ +I G G  G L+    +
Sbjct: 398 PDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYL 457

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
              M+   V  +    N ++ A ++ G+   A  L+KEML
Sbjct: 458 YQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 497



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 135/315 (42%), Gaps = 38/315 (12%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D+  + A+I  LC   +I  A  L  +M   G  P V T N L++   + G LEK  
Sbjct: 221 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 280

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V+ EM E    PN  +Y + +  +C+  ++ +A+ +   M +  + PN   +N ++   
Sbjct: 281 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII--- 337

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
                                              D+Y ++G   QA  L   M    I 
Sbjct: 338 -----------------------------------DAYVEHGPNDQAFILVEKMKSNGIS 362

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             IV YN+LI G C    IS A      +     +PD ++YNTL++  C +G +D+A   
Sbjct: 363 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 422

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + K G+     +Y  +I GL   G + +       M++ +VVP   I N++++ Y +
Sbjct: 423 QQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 482

Query: 414 CGDLSNAFSIRDLML 428
            G+   A  +R  ML
Sbjct: 483 YGNEIKAEDLRKEML 497



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 106/245 (43%), Gaps = 43/245 (17%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  M++ G     L+ +   + +++   C  GKI  A+ +   M  K  +P+   +N ++
Sbjct: 283 LSEMQENG-----LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 337

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           +   + G  ++A  ++ +M     SP+  TYN  I G C  +++ +A  + ++++N+ + 
Sbjct: 338 DAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLI 397

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P+ V++N L+ A C +G                                    N DK  A
Sbjct: 398 PDAVSYNTLISACCYRG------------------------------------NIDK--A 419

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           L L   M +  I++ +  Y+ LI+G    G ++     + +M++   +P    +N ++  
Sbjct: 420 LDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 479

Query: 341 LCKQG 345
             K G
Sbjct: 480 YSKYG 484



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 60/134 (44%)

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           N F++N +I    R G   DA  +  EM    + P+  TYN +I      G +    +L 
Sbjct: 14  NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 73

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           D+M+  G+ P+ ITY  L+ G C  G M E   +  ++ +  +  D   + IL     R 
Sbjct: 74  DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 133

Query: 555 KESDKARDIHQKWL 568
            +S     +  K+L
Sbjct: 134 GDSKAMLSLFGKYL 147


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/408 (30%), Positives = 214/408 (52%), Gaps = 3/408 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K   A+ L  +M+ KG  PD++T+  ++N LCK G+ + A +++ +M + +   +   Y+
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I   C+   +D AL+LF+ M N GIRP+  T++ L+  LC  G   DA + L ++L  
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML-- 302

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
            + K   +V+T   L+D++ K G   +A  L+++M Q++I  +IV YN LINGFC++  +
Sbjct: 303 -ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A   F  M+ +  LPDV+TYNTL+N  CK  K+ +    +  +S+ G+  + ++Y T+
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I G     D   A+     M+   V P    +N ++DG  + G L  A  + + +    +
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +++T+N +     + G + D + L   + L G+ PDV  YN +I   C  G    A  
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           L+ +M   G  PD  TY  LI+ H   G+   + E+  ++++   A D
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 589



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 214/438 (48%), Gaps = 5/438 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++   C G +I  A+ L  +M++ G  PD +T   LV+ L +     +A  ++  M   
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY A I G C+  E D AL+L + M    I  + V ++ ++ +LCK   + DA
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E+   D+     DV T + L+      G    A  L +DM ++ I  ++V +N L
Sbjct: 260 LNLFTEM---DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+ F   G +  A   F +M++R   P+++TYN+L+N  C   +LDEA   + ++     
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y T+I G C    +V   E    M  + +V     +  +I G+ +  D  NA  
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M+S GV  N+ T+N L+    + G +  A  + + +    + PD++TYN++    C
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +     L+  +  +G+ PD+I Y  +I G C +G  +EA  +F K++  G   D  
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556

Query: 543 PFRILKKRYRRMKESDKA 560
            +  L + +  +++ DKA
Sbjct: 557 TYNTLIRAH--LRDGDKA 572



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 220/424 (51%), Gaps = 3/424 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   ++  AL +  KM++ G  P ++T N L+N  C    + +A  ++ +M EM 
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T+   + G  + N+  +A+ L   M   G +P+ VT+  +++ LCK+G    A+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++   + GK  +DV+  + ++DS  K      AL L+ +M  K I+ D+  Y+ LI
Sbjct: 226 NLLNKM---EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G  S A      ML+R   P+V+T+N+L++   K+GKL EA   +  + +  + 
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y ++I G C+H  + +A++    M+ K  +P+   +N +I+G+ +   + +   +
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+  N  T+  LI    +     +A  + K+M+ DG+ P++ TYN L+   C 
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A+ +++ + +  + PDI TY  + +G C  G +++  ++F  +   G+  D I 
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522

Query: 544 FRIL 547
           +  +
Sbjct: 523 YNTM 526



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 203/420 (48%), Gaps = 5/420 (1%)

Query: 118 YRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR 177
           YR  ++  R+  L  K+  A+ L  +M++    P ++  + L++ + K+   +       
Sbjct: 32  YREKLS--RNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGE 89

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           +M  +  S N  TYN  I   CR ++L  AL +   M   G  P+ VT N L++  C   
Sbjct: 90  KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 149

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            + +AV  + +++   +     D +T T L+   F++    +A+AL   M  K  Q D+V
Sbjct: 150 RISEAVALVDQMV---EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 206

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            Y  +ING C  G+   A     +M K     DV+ Y+T+++ LCK   +D+A + +  +
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
              G+ PD  +Y ++I  LC +G    A   L  MLE+ + P    +N +ID + + G L
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             A  + D M+   +  N+ T+N+LI        + +A  +   M+     PDV TYN L
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I   C    +   ++L+ +M RRG+  + +TYT LI G     +   A+ VF ++ + G+
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 180/364 (49%), Gaps = 3/364 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  VI  LC    +  AL L  +M  KG  PDV T++ L++ LC  G    A 
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M E + +PN  T+N+ I  + +  +L +A  LF  M    I PN VT+N L++  
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C    L +A +    +++ D      DV+T   L++ + K       + L+ DM ++ + 
Sbjct: 356 CMHDRLDEAQQIFTLMVSKD---CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            + V Y  LI+GF    D  +A   F QM+  G  P+++TYNTLL+ LCK GKL++A   
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  L K+ + PD  +Y  + +G+C  G +    +   S+  K V P+   +N +I G+ +
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G    A+++   M   G   +  T+N LI A  R G    +  L KEM       D  T
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST 592

Query: 474 YNLL 477
           Y L+
Sbjct: 593 YGLV 596



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 197/403 (48%), Gaps = 9/403 (2%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           L++A  +  EM + RP P+   ++  ++   ++ + D  +     M   G+  N  T+NI
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           +++ LC++  L  A+  LG+++    G +   ++T   L++ +       +A+AL + M 
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPS---IVTLNSLLNGFCHGNRISEAVALVDQMV 162

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           +   Q D V +  L++G   +   S A A   +M+ +G  PD++TY  ++N LCK+G+ D
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            A +    + K  +  D + Y T+I  LC +  +  A      M  K + P+   ++ +I
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282

Query: 409 D---GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
                YGR  D S   S    ML   ++ NV TFN+LI A  + G + +A  L  EM+  
Sbjct: 283 SCLCNYGRWSDASRLLSD---MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            I P++ TYN LI   C    +  A Q++  M+ +   PD++TY  LI G C    + + 
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            E+F  +   GL  + + +  L   + +  + D A+ + ++ +
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 153/328 (46%), Gaps = 32/328 (9%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   + ++I  LC  G+   A  L   M+++   P+V+T N L++   K G L +A+
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM +    PN  TYN+ I G+C  + LD+A  +F+ M +    P+ VT+N L++  
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390

Query: 234 CK----------------KGLLGDAVKFL----GEVLADDDGKAT------------SDV 261
           CK                +GL+G+ V +     G   A D   A              ++
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T   L+D   KNG   +A+ ++  + +  ++ DI  YN++  G C  G +   +  FC 
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           +  +G  PDVI YNT+++  CK+G  +EA   +  + + G  PD  +Y T+I+     GD
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIID 409
              + E +  M       +   + ++ D
Sbjct: 571 KAASAELIKEMRSCRFAGDASTYGLVTD 598



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 136/312 (43%), Gaps = 39/312 (12%)

Query: 82  NPQAV-FNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
           NP  V FN+L D   KE  L   + + D    R +++ +   + ++I   C+  ++  A 
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQ 365

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            +   M+ K  +PDV+T+N L+N  CK   +     + R+MS      N  TY   I G+
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV---KFLGEVLADDD- 254
            + ++ D A  +F  M ++G+ PN +T+N L+  LCK G L  A+   ++L +   + D 
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485

Query: 255 -------------GKAT---------------SDVITSTILMDSYFKNGDKFQALALWND 286
                        GK                  DVI    ++  + K G K +A  L+  
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +     D   YN LI     +GD +++     +M    F  D  TY  + + L   G+
Sbjct: 546 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGR 604

Query: 347 LDEASHFYGVLS 358
           LD+   F  VLS
Sbjct: 605 LDKG--FLEVLS 614


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/383 (33%), Positives = 209/383 (54%), Gaps = 7/383 (1%)

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
           G   ++ R+MI++    +V++ N +VN LCK+G L +A  VI +M     SPN  TYN  
Sbjct: 137 GDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTL 196

Query: 195 ITGYC---RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           I GYC   R+ ++ KA  +   M   GI PN VT+NIL+   CK   +  A++  GE+  
Sbjct: 197 IDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQR 256

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   +V+T  IL++    +G   +A+AL + M   +++ ++V +NVLINGFC N  
Sbjct: 257 QG---LRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKT 313

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           ++ A   F  M K+G  P+ +TY TL++  CK G++++A   Y ++   G+ P+  +Y  
Sbjct: 314 VNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNC 373

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC  GD+  AR  +  M+ K +  +   +N++ID   + G+   A  + D M   G
Sbjct: 374 LIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKG 433

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           ++ +  T+N L+    R G++  A  ++  M   G   +V T+N+LI   C  G +  A 
Sbjct: 434 LNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDAN 493

Query: 492 QLYDEMLRRGITPDIITYTELIK 514
            L +EML RG+ P+  TY E+IK
Sbjct: 494 GLLNEMLERGLVPNRTTY-EIIK 515



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/386 (32%), Positives = 201/386 (52%), Gaps = 22/386 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCK---IGDLEKADHVIREMS 180
           V+  LC  GK+  A  +   M   G  P+V+T+N L++  CK   IG + KAD +++EM 
Sbjct: 161 VVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMV 220

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  TYN  I G+C+   +  A+ +F  M   G+RPN VT+NIL++ LC  G + 
Sbjct: 221 AKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVD 280

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +AV    ++++ D      +V+T  +L++ + KN    +A+ L+NDM ++ +  + + Y 
Sbjct: 281 EAVALRDQMVSSD---LEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYT 337

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+ +C +G +  AFA +  M+ RG  P+V TYN L+  LC++G +  A      +   
Sbjct: 338 TLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSK 397

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            ++ D ++Y  +I  LC  G+  KA + L  M EK + P    +N ++DGY R G+L  A
Sbjct: 398 KLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAA 457

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +R  M   G  +NV T N LI      G + DA  L  EML  G+ P+  TY +    
Sbjct: 458 LIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEI---- 513

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDI 506
                       + +EM+ +G  PDI
Sbjct: 514 ------------IKEEMMEKGFVPDI 527



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 214/401 (53%), Gaps = 6/401 (1%)

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           +++ N L++ L K  +    + V REM + +   N  ++N  + G C+V +L++A  +  
Sbjct: 120 LISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIE 179

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVK---FLGEVLADDDGKATSDVITSTILMD 269
            M   G+ PN +T+N L+   CK G +G   K    L E++A        + +T  IL+D
Sbjct: 180 DMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKG---ICPNEVTYNILID 236

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
            + K+ +   A+ ++ +M ++ ++ ++V YN+LING C +G +  A A   QM+     P
Sbjct: 237 GFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEP 296

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           +V+T+N L+N  CK   ++EA + +  + K GV P+ ++Y T+I   C  G +  A    
Sbjct: 297 NVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALY 356

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M+++ + PE   +N +I G  R GD+  A S+ + M+S  +S++V T+N LI +  + 
Sbjct: 357 NMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKK 416

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G    A  L  EM   G+ P   TYN L+   C  G++  AL +   M R+G   +++T+
Sbjct: 417 GESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTH 476

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
             LIKG C +G +++A  +  ++   GL  +   + I+K+ 
Sbjct: 477 NVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEE 517



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 181/370 (48%), Gaps = 6/370 (1%)

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N    +  +  + R  ++ +    F    + G + + ++ N L+  L K+   GD     
Sbjct: 84  NSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVY 143

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            E++     K   +VI+  I+++   K G   +A  +  DM    +  +++ YN LI+G+
Sbjct: 144 REMIKR---KIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGY 200

Query: 307 CLNGDISSAF---AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           C  G I   +   A   +M+ +G  P+ +TYN L++  CK   +  A   +G + + G+ 
Sbjct: 201 CKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLR 260

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y  +I GLC  G + +A      M+   + P     NV+I+G+ +   ++ A ++
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINL 320

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   GV  N  T+  LI A  + G + DAF+L   M+  GIFP+V TYN LI   C 
Sbjct: 321 FNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCR 380

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A  L +EM+ + ++ D++TY  LI   C +G  ++A ++  ++   GL   H+ 
Sbjct: 381 KGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVT 440

Query: 544 FRILKKRYRR 553
           +  L   Y R
Sbjct: 441 YNTLMDGYCR 450



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 157/303 (51%), Gaps = 3/303 (0%)

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           +I+   L+    K  +      ++ +M ++ I+ +++++N+++NG C  G ++ A     
Sbjct: 120 LISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIE 179

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK---TGVAPDQISYKTIIQGLC 377
            M   G  P+VITYNTL++  CK G++ +      +L +    G+ P++++Y  +I G C
Sbjct: 180 DMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFC 239

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
              ++  A      M  + + P    +N++I+G    G +  A ++RD M+S  +  NV 
Sbjct: 240 KDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVV 299

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T N LI    +  ++ +A +L  +M   G+ P+  TY  LI A C  G +  A  LY+ M
Sbjct: 300 THNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMM 359

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
           + RGI P++ TY  LI G C +G++K A  +  ++ +  L+ D + + IL     +  ES
Sbjct: 360 IDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGES 419

Query: 558 DKA 560
            KA
Sbjct: 420 RKA 422



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 62/128 (48%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I  LC  G+   A+ L  +M +KG  P  +T+N L++  C+ G+L  A 
Sbjct: 399 LSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAAL 458

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V   M       N  T+N  I G+C    L+ A  L + M   G+ PNR T+ I+   +
Sbjct: 459 IVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEM 518

Query: 234 CKKGLLGD 241
            +KG + D
Sbjct: 519 MEKGFVPD 526


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 225/438 (51%), Gaps = 6/438 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           +R L   G++   L    +MI +G +PDV+    L+   C+ G  +KA  ++  +     
Sbjct: 113 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGA 172

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+  TYN  I GYC+  E+DKAL +   M+   + P+ VT+N ++ +LC  G L +A++
Sbjct: 173 VPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAME 229

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L   L  +      DVIT TIL+++   +    QA+ L ++M +K  + D+V YNVLIN
Sbjct: 230 VLDRQLQRE---CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G +  A  +   M   G  P+VIT+N +L  +C  G+  +A      + + G +P
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
             +++  +I  LC    + +A + L  M +   VP    +N ++ G+ +   +  A    
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYL 406

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           ++M+S G   ++ T+N L+ A  + G +  A  +  ++   G  P + TYN +I     +
Sbjct: 407 EIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 466

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G    A++L +EM R+G+ PDIITY+ L++G    G + EA ++F  ++ L +    + +
Sbjct: 467 GKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTY 526

Query: 545 RILKKRYRRMKESDKARD 562
             +     + +++ +A D
Sbjct: 527 NAIMLGLCKAQQTSRAID 544



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 203/427 (47%), Gaps = 24/427 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G+I  AL +  +M      PDV+T+N ++  LC  G L++A  V+    +  
Sbjct: 182 LIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRE 238

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY   I   C  + + +A+ L   M   G +P+ VT+N+L++ +CK+G L +A+
Sbjct: 239 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAI 298

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           KFL  + +        +VIT  I++ S    G    A  L +DM +K     +V +N+LI
Sbjct: 299 KFLNNMPSYG---CKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILI 355

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           N  C    +  A     +M K G +P+ ++YN LL+  C++ K+D A  +  ++   G  
Sbjct: 356 NFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCY 415

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y T++  LC  G +  A E L  +  K   P    +N +IDG  + G    A  +
Sbjct: 416 PDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVEL 475

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   G+  ++ T++ L+    R G + +A  +  +M    I P   TYN ++   C 
Sbjct: 476 LEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCK 535

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKG----------------HCARGNMKE--A 525
                 A+     M+ +G  P   TYT LI+G                 C+RG +K+  A
Sbjct: 536 AQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIADEGLAEEALELLNELCSRGFVKKSSA 595

Query: 526 EEVFAKI 532
           E+V  K+
Sbjct: 596 EQVVVKM 602



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 197/407 (48%), Gaps = 6/407 (1%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N  + +L + G+LE+    +  M      P+     + I G+CR  +  KA  +   + N
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
           +G  P+ +T+N+L+   CK G +  A++ L  +          DV+T   ++ S   +G 
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERM------SVAPDVVTYNTILRSLCDSGK 223

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A+ + +   Q+    D++ Y +LI   C +  +  A     +M K+G  PDV+TYN 
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L+N +CK+G+LDEA  F   +   G  P+ I++  I++ +C  G  + A   L  ML K 
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P    +N++I+   R   L  A  + + M   G   N  ++N L+    +   +  A 
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
              + M+  G +PD+ TYN L+ A C  G +  A+++ +++  +G +P +ITY  +I G 
Sbjct: 404 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGL 463

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
              G  + A E+  +++  GL  D I +  L +   R  + D+A  I
Sbjct: 464 TKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKI 510



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 149/307 (48%), Gaps = 3/307 (0%)

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
           +G  + +   S I +    +NG+  + L     M  +    D++A   LI GFC +G   
Sbjct: 99  NGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTK 158

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A      +   G +PDVITYN L+   CK G++D+A     VL +  VAPD ++Y TI+
Sbjct: 159 KATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALE---VLERMSVAPDVVTYNTIL 215

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
           + LC  G + +A E L   L++   P+   + ++I+       +  A  + D M   G  
Sbjct: 216 RSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCK 275

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            +V T+N LI    + G + +A      M   G  P+V T+N+++ + C+ G    A +L
Sbjct: 276 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERL 335

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
             +MLR+G +P ++T+  LI   C +  +  A +V  K+   G   + + +  L   + +
Sbjct: 336 LSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQ 395

Query: 554 MKESDKA 560
            K+ D+A
Sbjct: 396 EKKMDRA 402



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 130/257 (50%), Gaps = 5/257 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  ++R +C  G+   A  L   M++KG  P V+T N L+N LC+   L +A  V+ +M 
Sbjct: 316 HNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP 375

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  +YN  + G+C+  ++D+A+     M + G  P+ VT+N L+ ALCK G + 
Sbjct: 376 KHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVD 435

Query: 241 DAVKFLGEVLADDDGKATSDV-ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            AV+ L ++      K  S V IT   ++D   K G    A+ L  +M +K ++ DI+ Y
Sbjct: 436 AAVEILNQL----SSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITY 491

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           + L+ G    G +  A   F  M      P  +TYN ++  LCK  +   A  F   + +
Sbjct: 492 STLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVE 551

Query: 360 TGVAPDQISYKTIIQGL 376
            G  P + +Y  +I+G+
Sbjct: 552 KGCKPTEATYTILIEGI 568



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 127/270 (47%), Gaps = 3/270 (1%)

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
           A N+ +     NG++     +  +M+ +G +PDVI   +L+   C+ GK  +A+    +L
Sbjct: 108 ASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEIL 167

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
             +G  PD I+Y  +I G C  G+I KA E L  M   SV P+   +N I+      G L
Sbjct: 168 ENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKL 224

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             A  + D  L      +V T+  LI A      +  A  L  EM   G  PDV TYN+L
Sbjct: 225 KEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVL 284

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I   C  G +  A++  + M   G  P++IT+  +++  C+ G   +AE + + +   G 
Sbjct: 285 INGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGC 344

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           +   + F IL     R +   +A D+ +K 
Sbjct: 345 SPSVVTFNILINFLCRKRLLGRAIDVLEKM 374


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 223/434 (51%), Gaps = 3/434 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A+ L   M + G  P V  +N ++  LCK   ++ A+ +  EM + R +PN  TY
Sbjct: 196 GDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITY 255

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYC+V +L++A ++   M    + P  +T N L++ LC+  ++ +A + L E+  
Sbjct: 256 NTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEM-- 313

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            +      D  T T L D + K G+   ++ L  +  +K +Q      ++L+N  C  G+
Sbjct: 314 -EVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGN 372

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A     + L+ G  P  + +NT++N  C+ G +++A      +   G+ P+ ++Y +
Sbjct: 373 MEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNS 432

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +++  C   ++ +A + +  M+EK V+P    +N +IDGYGR       F I + M   G
Sbjct: 433 LVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKG 492

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  NV ++  LI    +  +I +A  +  +M+  G+ P+   YN+LI  SC  G +  A 
Sbjct: 493 LKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAF 552

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           + +DEM+ R I P ++TY  LI G C +G + EAE + ++I   GL+ D I +  L   Y
Sbjct: 553 RFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGY 612

Query: 552 RRMKESDKARDIHQ 565
                  KA ++++
Sbjct: 613 SSAGNVQKALELYE 626



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 227/460 (49%), Gaps = 11/460 (2%)

Query: 105 RDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC 164
           R   P R T  T       +I   C  G++  A  +R +M  +   P ++T N L+N LC
Sbjct: 246 RRVAPNRITYNT-------LIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLC 298

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           +   +E+A  V+ EM      P+  TY     G+ +   +D ++ L       G++    
Sbjct: 299 RAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDY 358

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           T +IL++ALCK+G +  A + L + L  ++G A   V  +TI+ + Y + GD  +A    
Sbjct: 359 TCSILLNALCKEGNMEKAEEVLKKFL--ENGLAPVGVFFNTIV-NGYCQVGDINKAYTTI 415

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
             M    ++ + V YN L+  FC   ++  A     +M+++G LP+V TYNTL++   + 
Sbjct: 416 EKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRS 475

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
              D        + K G+ P+ ISY  +I  LC   +I++A   L  M+ + VVP   I+
Sbjct: 476 CLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIY 535

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           N++IDG    G L +AF   D M++  +   + T+N LI    + G + +A +L  E+  
Sbjct: 536 NMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITR 595

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            G+  DV TYN LI    + G++  AL+LY+ M + GI P + TY  LI G C +  +  
Sbjct: 596 KGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVL 654

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
            E+++ ++  + L  D + +  L   Y    +  KA  +H
Sbjct: 655 VEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLH 694



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 198/414 (47%), Gaps = 4/414 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++   C  G I  A     KM   G  P+ +T+N LV + C++ ++E+A+  I++M E 
Sbjct: 397 TIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEK 456

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN  I GY R    D+   +   M   G++PN +++  L++ LCK   + +A
Sbjct: 457 GVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEA 516

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              LG+++         +     +L+D     G    A   +++M  + I   +V YN+L
Sbjct: 517 EVILGDMVHRG---VVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNIL 573

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING C  G +  A     ++ ++G   DVITYN+L++     G + +A   Y  + K+G+
Sbjct: 574 INGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGI 633

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P   +Y  +I G C    +V   +    ML+ ++VP+  I+N +I  Y   GD+  A S
Sbjct: 634 KPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACS 692

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M + G+  +  T+N LIL   + G +    +L  +M + G+ P   TY++LI   C
Sbjct: 693 LHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHC 752

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            L     A   Y EM   G TP +     LI G    G   +A+ + +++   G
Sbjct: 753 KLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 211/429 (49%), Gaps = 4/429 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  ++ L  + ++KG      T + L+N LCK G++EKA+ V+++  E   +P    +
Sbjct: 336 GNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFF 395

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  + GYC+V +++KA      M   G+RPN VT+N LV   C+   + +A K + +++ 
Sbjct: 396 NTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMV- 454

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     +V T   L+D Y ++    +   +  +M +K ++ ++++Y  LIN  C + +
Sbjct: 455 --EKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDAN 512

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I  A      M+ RG +P+   YN L++  C  GKL +A  F+  +    + P  ++Y  
Sbjct: 513 ILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNI 572

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC  G +++A      +  K +  +   +N +I GY   G++  A  + + M   G
Sbjct: 573 LINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSG 632

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +   + T++ LI    + G +     + +EML   + PD   YN LI      G +  A 
Sbjct: 633 IKPTLNTYHRLIAGCGKEGLVL-VEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKAC 691

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            L+  M  +GI PD +TY  LI GH   G M + + +   ++  GL      + IL   +
Sbjct: 692 SLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGH 751

Query: 552 RRMKESDKA 560
            ++K+ D A
Sbjct: 752 CKLKDFDGA 760



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 190/424 (44%), Gaps = 53/424 (12%)

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           + + + +V+E  ++  L K D V+         P+ A+ N F+         +  L LFS
Sbjct: 121 ICSESKMVSESAELYMLMKKDGVL---------PSVASLNLFLESLVSTKRYEDTLQLFS 171

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            +  +G+RP++  +   + A  K G L  A++ +        G  +  V    +++    
Sbjct: 172 EIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELM---TCMKRGGVSPGVFVYNVVIGGLC 228

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K      A  L+++M  + +  + + YN LI+G+C  G +  AF    +M      P +I
Sbjct: 229 KEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTII 288

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG----------------- 375
           T+N+LLN LC+   ++EA      +   G  PD+ +Y T+  G                 
Sbjct: 289 TFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEA 348

Query: 376 ------------------LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
                             LC  G++ KA E L   LE  + P    +N I++GY + GD+
Sbjct: 349 VRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDI 408

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
           + A++  + M + G+  N  T+N+L+       ++ +A    K+M+  G+ P+V TYN L
Sbjct: 409 NKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTL 468

Query: 478 I---GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           I   G SC         Q+ +EM ++G+ P++I+Y  LI   C   N+ EAE +   +  
Sbjct: 469 IDGYGRSCLFDR---CFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVH 525

Query: 535 LGLA 538
            G+ 
Sbjct: 526 RGVV 529



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/424 (23%), Positives = 193/424 (45%), Gaps = 23/424 (5%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E     HV  ++ L   G+  TA  L R M+   +     +H Y +  L           
Sbjct: 57  EQARHEHVQKLQTLLQQGRTETARRLIRSMLLPKSPFSSPSHLYTLFSLSS--------- 107

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNEL-DKALHLFSTMANNGIRPNRVTHNILVHAL 233
                + M+P      ++  +   C  +++  ++  L+  M  +G+ P+  + N+ + +L
Sbjct: 108 -----TPMKP-----LFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESL 157

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
                  D ++   E++   +     D       + +  K GD  +A+ L   M +  + 
Sbjct: 158 VSTKRYEDTLQLFSEIV---ESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVS 214

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             +  YNV+I G C    +  A   F +ML R   P+ ITYNTL++  CK G+L+EA + 
Sbjct: 215 PGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNI 274

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +    V P  I++ +++ GLC    + +A+  L  M     VP+   +  + DG+ +
Sbjct: 275 RERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLK 334

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
           CG++  + ++ +  +  GV    +T + L+ A  + G++  A  + K+ L +G+ P    
Sbjct: 335 CGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVF 394

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +N ++   C +G I+ A    ++M   G+ P+ +TY  L+K  C   NM+EAE+   K+ 
Sbjct: 395 FNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMV 454

Query: 534 TLGL 537
             G+
Sbjct: 455 EKGV 458



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 131/289 (45%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           ++  L+  M +  +   + + N+ +               F ++++ G  PD   Y   +
Sbjct: 130 ESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAI 189

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
               K G L  A      + + GV+P    Y  +I GLC    +  A +    ML++ V 
Sbjct: 190 QAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVA 249

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P    +N +IDGY + G L  AF+IR+ M    V   + TFN+L+    R   + +A  +
Sbjct: 250 PNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRV 309

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            +EM + G  PD FTY  L       G++  ++ L +E +R+G+     T + L+   C 
Sbjct: 310 LEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCK 369

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
            GNM++AEEV  K    GLA   + F  +   Y ++ + +KA    +K 
Sbjct: 370 EGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKM 418



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 152/320 (47%), Gaps = 1/320 (0%)

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +L   DG   S V +  + ++S          L L++++ +  ++ D   Y   I     
Sbjct: 136 MLMKKDGVLPS-VASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVK 194

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            GD+  A      M + G  P V  YN ++  LCK+ ++ +A   +  +    VAP++I+
Sbjct: 195 LGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRIT 254

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y T+I G C  G + +A      M  ++V P    +N +++G  R   +  A  + + M 
Sbjct: 255 YNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEME 314

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
            +G   + FT+  L     + G++  + +L +E +  G+    +T ++L+ A C  G++ 
Sbjct: 315 VYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNME 374

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A ++  + L  G+ P  + +  ++ G+C  G++ +A     K++ +GL  +H+ +  L 
Sbjct: 375 KAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLV 434

Query: 549 KRYRRMKESDKARDIHQKWL 568
           K++  MK  ++A    +K +
Sbjct: 435 KKFCEMKNMEEAEKCIKKMV 454



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 76/155 (49%)

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +S +  +  LM   GV  +V + N  + +        D   L  E++  G+ PD F Y  
Sbjct: 128 VSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGK 187

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            I A+  LG +  A++L   M R G++P +  Y  +I G C    MK+AE++F ++    
Sbjct: 188 AIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRR 247

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           +A + I +  L   Y ++ + ++A +I ++  + N
Sbjct: 248 VAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVEN 282


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 239/488 (48%), Gaps = 19/488 (3%)

Query: 88  NALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           +A+D++L+  +  L  M D     CT+         +++ LC   +   AL L   M   
Sbjct: 140 DAMDIVLRR-MTELSCMPDV--FSCTI---------LLKGLCDENRSQEALELPHMMADG 187

Query: 148 ---GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
              G+ PDV+++  ++N   K GD  KA     EM + R SP+  TY++ I   C+   +
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAM 247

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD---DGKATSDV 261
           DKA+ + ++M  NG+ PN  T+  ++H  C  G   +A+ FL +V +D    DG    D+
Sbjct: 248 DKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDG-LEPDI 306

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
            T   L+  Y   G      AL + M +  I  D   YN+LI  +   G +  A   F +
Sbjct: 307 ATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSK 366

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M ++G  PD +TY  ++  LCK G++++A  ++  +   G++P  I Y ++I GLC    
Sbjct: 367 MRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 426

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
             +A E +L ML++ +      +N IID + + G +  +  + DLM+  GV  ++ T++ 
Sbjct: 427 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 486

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI      G + +A  L   M+  G+ P+  TY  LI   C +  +  AL L+ EM   G
Sbjct: 487 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSG 546

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
           ++PDIITY  +++G         A+E++ +I   G  I+   + I+     + K +D A 
Sbjct: 547 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 606

Query: 562 DIHQKWLL 569
            + Q   L
Sbjct: 607 RMFQNLCL 614



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 182/392 (46%), Gaps = 13/392 (3%)

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           + +P   TY   I   CR + LD        +   G R   +T   L+  LC      DA
Sbjct: 82  KVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ---KNIQTDIVAY 299
           +  +   + +       DV + TIL+          +AL L + M          D+V+Y
Sbjct: 142 MDIVLRRMTEL--SCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSY 199

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
             +INGF   GD   A++ + +ML R   PDV+TY++++  LCK   +D+A      + K
Sbjct: 200 TTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVK 259

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP---EPHI--WNVIIDGYGRC 414
            GV P+  +Y +I+ G C  G   +A  FL  +    V P   EP I  +  ++ GY   
Sbjct: 260 NGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATK 319

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G L    ++ DLM+  G+  + + +N LI A  + G + +A  +  +M   G+ PD  TY
Sbjct: 320 GALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTY 379

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
             +IG  C  G +  A+  +++M+  G++P  I Y  LI G C     + AEE+  ++  
Sbjct: 380 GAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD 439

Query: 535 LGLAIDHIPFRILKKRY---RRMKESDKARDI 563
            G+ ++ I F  +   +    R+ ES+K  D+
Sbjct: 440 RGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 471



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 213/479 (44%), Gaps = 19/479 (3%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           KE +  LK +R  G     LE D   +  +++     G +     L   M++ G  PD  
Sbjct: 283 KEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHY 342

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
            +N L+    K G +++A  V  +M +   +P+  TY A I   C+   ++ A+  F  M
Sbjct: 343 VYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQM 402

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            + G+ P  + +N L+H LC       A + + E+L  D G   + +  ++I+ DS+ K 
Sbjct: 403 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML--DRGICLNTIFFNSII-DSHCKE 459

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   ++  L++ M +  ++ DI+ Y+ LI+G+CL G +  A      M+  G  P+ +TY
Sbjct: 460 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 519

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
            TL+N  CK  ++ +A   +  +  +GV+PD I+Y  I+QGL        A+E  + + E
Sbjct: 520 RTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 579

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
                E   +N+I+ G  +     +A  +   +    +     TFN +I A  + G   +
Sbjct: 580 SGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGE 639

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L      +G+ P+ +TY L+       G +    QL+  M   G T D      +++
Sbjct: 640 AKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVR 699

Query: 515 GHCARGNMKEAEEVFAKI---------QTLGLAIDHIP-------FRILKKRYRRMKES 557
               RG +  A    + I          T  L ID +         R L ++Y+   ES
Sbjct: 700 ELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYHRFLPEKYKSFIES 758



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 134/299 (44%), Gaps = 12/299 (4%)

Query: 280 ALALWNDMFQKN---IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
           A++ +N M +     +   +  Y +LI   C    +   FA    ++K+GF  + IT+  
Sbjct: 68  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTP 127

Query: 337 LLNCLCKQGKLDEASHFY-GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE- 394
           LL  LC   +  +A       +++    PD  S   +++GLC      +A E    M + 
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADG 187

Query: 395 --KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
                 P+   +  +I+G+ + GD   A+S    ML   +S +V T++++I A  +G ++
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAM 247

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY-----DEMLRRGITPDII 507
             A  +   M+ +G+ P+  TY  ++   C+ G    A+        D +   G+ PDI 
Sbjct: 248 DKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIA 307

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           TY  L++G+  +G +     +   +   G+  DH  + IL   Y +  + D+A  +  K
Sbjct: 308 TYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSK 366



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 4/119 (3%)

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG---IFPDVFTYN 475
           +A  + D +L  G  ++++  N   LA+    S   A S    M   G   + P V TY 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNR-ALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 91

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           +LIG  C    + L       ++++G   + IT+T L+KG CA     +A ++  +  T
Sbjct: 92  ILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/457 (31%), Positives = 234/457 (51%), Gaps = 10/457 (2%)

Query: 120 RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
           R + V+RD  L  K      +   M Q G  P V+T+N +++  CK G +++A  ++ EM
Sbjct: 185 RILRVLRDENLLSKAKNVYGM---MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEM 241

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
            E    PN  TYN  + G  +  EL++A  L   M N+G+  +  T+N L++  C+KGL 
Sbjct: 242 QERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLF 301

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +A   + E++   + +A   + T   LM    K          ++DM +     DIV++
Sbjct: 302 VEAFDLVEEMV---NRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSF 358

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N L+ G+C  G IS AF  F ++  R  +P VITYNTL++ LC  G LD A      ++ 
Sbjct: 359 NSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTD 418

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ PD  +Y  ++ G    G +  AR F   ML K + P+   +N  I G  +  D S 
Sbjct: 419 QGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSV 478

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AFS+++ ML+ G   +V T+N  + A  + G+  +A  L + M+ DG+ PD  TY  +I 
Sbjct: 479 AFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIIN 538

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                GH+  A ++++EML +G+ P ++TYT LI  H A+  +  A   F+K+    +  
Sbjct: 539 GFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPA 598

Query: 540 DHIPFRILKK---RYRRMKESDKARD-IHQKWLLRNK 572
           + I +  +       RRM E+ K  D + +K +L NK
Sbjct: 599 NVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNK 635



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 214/423 (50%), Gaps = 4/423 (0%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           + D+ + G +   L +  KMI+ G +PDV   N ++  L     L KA +V   M +   
Sbjct: 153 VVDVLIAGHV-XCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGI 211

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P   TYN  +  YC+   +D+AL L S M   G  PN VT+N+LV+ L KKG L  A  
Sbjct: 212 KPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKG 271

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            + E+L   +        T   L++ + + G   +A  L  +M  +     +  YN L+ 
Sbjct: 272 LIEEML---NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMY 328

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C    ++     F  MLK  F PD++++N+LL   C+ G + EA   +  L    + P
Sbjct: 329 GLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVP 388

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
             I+Y T+I GLC+ G +  A      M ++ + P+   + ++++G  + G +S A    
Sbjct: 389 TVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFF 448

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           + MLS G+  + F +N  I+ E +      AFS+++EML  G  PDV TYN+ + A C  
Sbjct: 449 NEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQ 508

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G+   A  L + M+  G+ PD +TYT +I G    G++++A EVF ++ + G+A   + +
Sbjct: 509 GNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTY 568

Query: 545 RIL 547
            +L
Sbjct: 569 TVL 571



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 214/445 (48%), Gaps = 9/445 (2%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G++  AL L  +M ++G  P+ +T+N LVN L K G+LE+A  +I EM     + + 
Sbjct: 226 CKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSA 285

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN  I G+C+     +A  L   M N    P   T+N L++ LCK       V+  G 
Sbjct: 286 YTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCK------WVQVTGV 339

Query: 249 VLADDD---GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
            L   D    K T D+++   L+  Y + G   +A  L++++  +++   ++ YN LI+G
Sbjct: 340 RLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHG 399

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C+ G + +A     +M  +G  PD+ TY  L+N   K G +  A  F+  +   G+ PD
Sbjct: 400 LCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPD 459

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
           + +Y T I G     D   A      ML     P+   +NV +    + G+   A  + +
Sbjct: 460 RFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLE 519

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M+S G+  +  T+ ++I    + G +  A  +  EML  G+ P V TY +LI A     
Sbjct: 520 NMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQ 579

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            + LA   + +ML + +  ++ITY  +I G C    M EA + F +++  G+  +   + 
Sbjct: 580 MLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYT 639

Query: 546 ILKKRYRRMKESDKARDIHQKWLLR 570
           IL      M   ++A  ++++ L R
Sbjct: 640 ILINESCNMGYWEEALRLYREMLDR 664



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 167/390 (42%), Gaps = 38/390 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G    A  L  +M+ +   P + T+N L+  LCK   +        +M + +
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  ++N+ + GYCR   + +A  LF  +    + P  +T+N L+H LC  G L  A+
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD-------- 295
           +   E+    D     D+ T TIL++  FK G    A   +N+M  K ++ D        
Sbjct: 411 RLKKEM---TDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRI 467

Query: 296 ---------------------------IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
                                      ++ YNV ++  C  G+   A      M+  G +
Sbjct: 468 VGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLI 527

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           PD +TY +++N   K G L +A   +  +   GVAP  ++Y  +I        +  A  +
Sbjct: 528 PDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMY 587

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              MLEKSV      +N II+G      +  A+   D M   G+  N F++  LI     
Sbjct: 588 FSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCN 647

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            G   +A  L +EML   I PD FT+++ +
Sbjct: 648 MGYWEEALRLYREMLDRKIQPDSFTHSVFL 677



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 8/175 (4%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
            +E  D L+ M   G     L  D+  + ++I      G +  A  +  +M+ KG  P V
Sbjct: 511 FEEACDLLENMVSDG-----LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+  L++       L+ A     +M E     N  TYNA I G C    +D+A   F  
Sbjct: 566 VTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDE 625

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           M   GI PN+ ++ IL++  C  G   +A++   E+L   D K   D  T ++ +
Sbjct: 626 MEEKGILPNKFSYTILINESCNMGYWEEALRLYREML---DRKIQPDSFTHSVFL 677



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 24/108 (22%), Positives = 56/108 (51%)

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           +M+ +G+ PDV   N ++    +   +  A  +Y  M + GI P ++TY  ++  +C  G
Sbjct: 170 KMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEG 229

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            + +A E+ +++Q  G   + + + +L     +  E ++A+ + ++ L
Sbjct: 230 RVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEML 277


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 227/427 (53%), Gaps = 10/427 (2%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYL 159
           LK MRD   V   L T    +  VI   C  G++  A  + R+M+ + G  PDV+T+  +
Sbjct: 32  LKEMRDGKSVAPDLVT----YSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSV 87

Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
           V+ LC+ G +++A  ++REM      P+  T++A ITG+C   ++D+AL L+  +  +  
Sbjct: 88  VDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSC 147

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
           R + V+ + L+  LC++  +G+A +   E+   +DG    DV+T T L+D + K+G+  +
Sbjct: 148 RLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEK 207

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A+ +   M  +    ++V Y+ L++G C  GD+  A   F +M  +G +P+V+TY TL++
Sbjct: 208 AMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIH 267

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LC   K+D A      ++ T    D +SY  ++ G C  G I +A++    M  KS +P
Sbjct: 268 GLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLP 327

Query: 400 EPHIWNVIIDGYGRCGDLSNA-FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           +   +  ++ G+     L  A F + ++  + G+  +V T++ ++   +R     +A   
Sbjct: 328 DRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEF 387

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            +EM+   + P+  TY+ LI   C  G ++ A+    E+L+    PD++TYT +I+G C 
Sbjct: 388 IQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM----EVLKNVDKPDVVTYTIVIEGLCG 443

Query: 519 RGNMKEA 525
               +EA
Sbjct: 444 TDRTEEA 450



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 193/403 (47%), Gaps = 9/403 (2%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP-SPNCATYNAFITGYCRVNELDKALH 209
           P+  T+N +VN LCK     KA  V++EM + +  +P+  TY+  I G+C+  E+D+A  
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 210 LFSTMAN-NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           +   M   +G+ P+ VT+  +V  LC+ G +  A + + E+          D  T + L+
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKG---VEPDKFTFSALI 123

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR--- 325
             +       +AL L+ ++   + + D V+ + LI G C    I  A+  F +M  R   
Sbjct: 124 TGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDG 183

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
            + PDV+TY  L++  CK G L++A    GV+      P+ ++Y +++ GLC  GD+ +A
Sbjct: 184 AWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 243

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            +    M  K  VP    +  +I G      +  A  + D M +    ++  ++NAL+  
Sbjct: 244 LDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDG 303

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM-LRRGITP 504
             R G I +A  L KEM      PD  TY  L+   CN   +  A  L + M    GI P
Sbjct: 304 YCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDP 363

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           D++TY+ ++ G+       EA E   ++    +A + + +  L
Sbjct: 364 DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSL 406



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 189/392 (48%), Gaps = 7/392 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMAN-NGIRPNRVTHNILVHALCKKGLLGDAV 243
           +PN  TYN  + G C+     KA  +   M +   + P+ VT++ +++  CK+G +  A 
Sbjct: 6   APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 65

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E++  D G A  DV+T T ++D   ++G   +A  +  +M  K ++ D   ++ LI
Sbjct: 66  EILREMVTRD-GMA-PDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALI 123

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS--KTG 361
            G+C    +  A   + ++L      D ++ + L+  LC++ ++ EA   +  +   + G
Sbjct: 124 TGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDG 183

Query: 362 V-APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
              PD ++Y  +I G C  G++ KA + L  M  +  VP    ++ ++ G  + GDL  A
Sbjct: 184 AWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 243

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +   M S G   NV T+  LI        +  A  L  EM       D  +YN L+  
Sbjct: 244 LDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDG 303

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT-LGLAI 539
            C LG I  A QL+ EM  +   PD ITYT L++G C    ++EA  +   ++T  G+  
Sbjct: 304 YCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDP 363

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           D + + I+   Y R K   +A +  Q+ + RN
Sbjct: 364 DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN 395



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 158/342 (46%), Gaps = 42/342 (12%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + +++  LC  G +  AL L R+M  KG VP+V+T+  L++ LC    ++ A  ++ EM+
Sbjct: 227 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT 286

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                 +  +YNA + GYCR+  +++A  LF  MA     P+R+T+  LV   C    L 
Sbjct: 287 ATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLE 346

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +FL E +    G    DV+T +I++  Y +     +A     +M  +N+  + V Y+
Sbjct: 347 EA-RFLLENMKTAAG-IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYS 404

Query: 301 VLINGFCLNGDIS-------------------------------SAFAYFCQMLKRGFLP 329
            LI+G C  G ++                                A     +M+ +   P
Sbjct: 405 SLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEP 464

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
            V T+N+++  LC+ G +DEA      ++  G+ P  ++Y T+++G    G +  A E  
Sbjct: 465 SVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELF 524

Query: 390 LSMLEKS--------VVPEPHIWNVIIDGYGRCGDLSNAFSI 423
             M  K+        +VPE   ++ +I G  +  ++  A ++
Sbjct: 525 EVMRRKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAV 565



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 138/307 (44%), Gaps = 17/307 (5%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++   C  G+I  A  L ++M  K  +PD +T+  LV   C    LE+A  ++  M   
Sbjct: 299 ALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTA 358

Query: 183 RP-SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               P+  TY+  + GY R     +A      M    + PN VT++ L+  LCK G +  
Sbjct: 359 AGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNH 418

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+    EVL + D     DV+T TI+++         +AL L  +M  K ++  +  +N 
Sbjct: 419 AM----EVLKNVD---KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNS 471

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL---- 357
           +I   C  GD+  A+     M   G  P ++TY TLL    + G+++ A   + V+    
Sbjct: 472 VIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKA 531

Query: 358 ----SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
               S   + P+Q ++  +I+GLC   +I KA   +  +  +   P       I+DG  R
Sbjct: 532 KKSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLR 590

Query: 414 CGDLSNA 420
            G    A
Sbjct: 591 AGRTEEA 597



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 14/228 (6%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           ++MI +   P+ +T++ L++ LCK G +  A  V++ + +    P+  TY   I G C  
Sbjct: 389 QEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGT 444

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
           +  ++AL L   M N  + P+  T N ++ ALC+ G + +A K L  + A         +
Sbjct: 445 DRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG---LEPGM 501

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA-------YNVLINGFCLNGDISS 314
           +T T L++ + + G    A  L+  M +K  ++   A       ++ LI G C   +I  
Sbjct: 502 VTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDK 561

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           A A   ++  R   P       +++ L + G+ +EA      +SK G+
Sbjct: 562 AMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 88/177 (49%), Gaps = 2/177 (1%)

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
           V P    +NV+++G  +    S A+ + +++     V+ ++ T++ +I    + G +  A
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 456 FSLKKEMLL-DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
             + +EM+  DG+ PDV TY  ++   C  G +  A ++  EM  +G+ PD  T++ LI 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           G C    + EA +++ +I T    +D +    L     R +   +A ++ Q+  +R 
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRE 181



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 63/175 (36%), Gaps = 42/175 (24%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI  LC   +   AL L  +M+ K   P V T N ++  LC++GD+++A  ++
Sbjct: 430 DVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLL 489

Query: 177 REMSEMRPSPNCATY------------------------------------------NAF 194
             M+     P   TY                                          +A 
Sbjct: 490 VAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSAL 549

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           I G C+  E+DKA+ +   + +    P       +V  L + G   +A K +  +
Sbjct: 550 IRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 604


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/433 (32%), Positives = 225/433 (51%), Gaps = 7/433 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M Q G  P V+T+N +++  CK G +++A  ++ EM E    PN  TYN  + G  +  E
Sbjct: 206 MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           L++A  L   M N+G+  +  T+N L++  C+KGL  +A   + E++   + +A   + T
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMV---NRRAFPTLST 322

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              LM    K          ++DM +     DIV++N L+ G+C  G IS AF  F ++ 
Sbjct: 323 YNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELK 382

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            R  +P VITYNTL++ LC  G LD A      ++  G+ PD  +Y  ++ G    G + 
Sbjct: 383 CRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVS 442

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            AR F   ML K + P+   +N  I G  +  D S AFS+++ ML+ G   +V T+N  +
Sbjct: 443 MARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFV 502

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            A  + G+  +A  L + M+ DG+ PD  TY  +I      GH+  A ++++EML +G+ 
Sbjct: 503 HALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVA 562

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKESDKA 560
           P ++TYT LI  H A+  +  A   F+K+    +  + I +  +       RRM E+ K 
Sbjct: 563 PSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKY 622

Query: 561 RD-IHQKWLLRNK 572
            D + +K +L NK
Sbjct: 623 FDEMEEKGILPNK 635



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 214/423 (50%), Gaps = 4/423 (0%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           + D+ + G +   L +  KMI+ G +PDV   N ++  L     L KA +V   M +   
Sbjct: 153 VVDVLIAGHV-XCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGI 211

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P   TYN  +  YC+   +D+AL L S M   G  PN VT+N+LV+ L KKG L  A  
Sbjct: 212 KPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKG 271

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            + E+L   +        T   L++ + + G   +A  L  +M  +     +  YN L+ 
Sbjct: 272 LIEEML---NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMY 328

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C    ++     F  MLK  F PD++++N+LL   C+ G + EA   +  L    + P
Sbjct: 329 GLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVP 388

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
             I+Y T+I GLC+ G +  A      M ++ + P+   + ++++G  + G +S A    
Sbjct: 389 TVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFF 448

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           + MLS G+  + F +N  I+ E +      AFS+++EML  G  PDV TYN+ + A C  
Sbjct: 449 NEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQ 508

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G+   A  L + M+  G+ PD +TYT +I G    G++++A EVF ++ + G+A   + +
Sbjct: 509 GNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTY 568

Query: 545 RIL 547
            +L
Sbjct: 569 TVL 571



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 214/445 (48%), Gaps = 9/445 (2%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G++  AL L  +M ++G  P+ +T+N LVN L K G+LE+A  +I EM     + + 
Sbjct: 226 CKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSA 285

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN  I G+C+     +A  L   M N    P   T+N L++ LCK       V+  G 
Sbjct: 286 YTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCK------WVQVTGV 339

Query: 249 VLADDD---GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
            L   D    K T D+++   L+  Y + G   +A  L++++  +++   ++ YN LI+G
Sbjct: 340 RLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHG 399

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C+ G + +A     +M  +G  PD+ TY  L+N   K G +  A  F+  +   G+ PD
Sbjct: 400 LCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPD 459

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
           + +Y T I G     D   A      ML     P+   +NV +    + G+   A  + +
Sbjct: 460 RFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLE 519

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M+S G+  +  T+ ++I    + G +  A  +  EML  G+ P V TY +LI A     
Sbjct: 520 NMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQ 579

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            + LA   + +ML + +  ++ITY  +I G C    M EA + F +++  G+  +   + 
Sbjct: 580 MLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYT 639

Query: 546 ILKKRYRRMKESDKARDIHQKWLLR 570
           IL      M   ++A  ++++ L R
Sbjct: 640 ILINESCNMGYWEEALRLYREMLDR 664



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 167/390 (42%), Gaps = 38/390 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G    A  L  +M+ +   P + T+N L+  LCK   +        +M + +
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  ++N+ + GYCR   + +A  LF  +    + P  +T+N L+H LC  G L  A+
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD-------- 295
           +   E+    D     D+ T TIL++  FK G    A   +N+M  K ++ D        
Sbjct: 411 RLKKEM---TDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRI 467

Query: 296 ---------------------------IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
                                      ++ YNV ++  C  G+   A      M+  G +
Sbjct: 468 VGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLI 527

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           PD +TY +++N   K G L +A   +  +   GVAP  ++Y  +I        +  A  +
Sbjct: 528 PDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMY 587

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              MLEKSV      +N II+G      +  A+   D M   G+  N F++  LI     
Sbjct: 588 FSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCN 647

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            G   +A  L +EML   I PD FT+++ +
Sbjct: 648 MGYWEEALRLYREMLDRKIQPDSFTHSVFL 677



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 8/175 (4%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
            +E  D L+ M   G     L  D+  + ++I      G +  A  +  +M+ KG  P V
Sbjct: 511 FEEACDLLENMVSDG-----LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+  L++       L+ A     +M E     N  TYNA I G C    +D+A   F  
Sbjct: 566 VTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDE 625

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           M   GI PN+ ++ IL++  C  G   +A++   E+L   D K   D  T ++ +
Sbjct: 626 MEEKGILPNKFSYTILINESCNMGYWEEALRLYREML---DRKIQPDSFTHSVFL 677



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 24/108 (22%), Positives = 56/108 (51%)

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           +M+ +G+ PDV   N ++    +   +  A  +Y  M + GI P ++TY  ++  +C  G
Sbjct: 170 KMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEG 229

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            + +A E+ +++Q  G   + + + +L     +  E ++A+ + ++ L
Sbjct: 230 RVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEML 277


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 216/431 (50%), Gaps = 3/431 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI   C  G++   L L  +M  KG  P+  T+N ++  LCK G + +A+ V+
Sbjct: 287 DVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVL 346

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           REM     +P+   Y   I G+C++  +  A  LF  M    I P+ +T+  ++  LC+ 
Sbjct: 347 REMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQT 406

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A K   E++     +   D +T T L+D Y K G   +A +L N M Q  +  +I
Sbjct: 407 GRVMEADKLFHEMVCK---RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNI 463

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  L +G C  G++ +A     +M ++G   ++ TYN+L+N LCK G +D+A      
Sbjct: 464 VTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKD 523

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G  PD ++Y T++   C   ++V+A E L  ML++ + P    +NV+++G+   G 
Sbjct: 524 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGM 583

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L +   +   ML  G+  N  T+N+LI       ++     + + M   G+ PD  TYN+
Sbjct: 584 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 643

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C   ++  A  L+ +M+ +G    + +Y  LIKG   R    EA E+F +++  G
Sbjct: 644 LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 703

Query: 537 LAIDHIPFRIL 547
           L  D   + I 
Sbjct: 704 LVADREIYNIF 714



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 223/443 (50%), Gaps = 3/443 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +   LC  G++  A  L  +M  +G +PDV++++ ++N  C++G+L++   +I EM    
Sbjct: 259 ITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKG 318

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYN  I   C+  ++ +A  +   M + GI P+ V +  L+   CK G +  A 
Sbjct: 319 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY 378

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+      K + D IT T ++    + G   +A  L+++M  K ++ D V Y  LI
Sbjct: 379 RLFDEM---QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALI 435

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+C  G +  AF+   QML+ G  P+++TY  L + LCK G++D A+     + + G+ 
Sbjct: 436 DGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLE 495

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            +  +Y +++ GLC  G+I +A + +  M      P+   +  ++D Y +  ++  A  +
Sbjct: 496 LNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHEL 555

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              ML   +   V TFN L+      G + D   L K ML  GI P+  TYN LI   C 
Sbjct: 556 LRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCI 615

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
             ++    ++Y  M  +G+ PD  TY  LIKGHC   NMKEA  +   +   G  +    
Sbjct: 616 RNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSS 675

Query: 544 FRILKKRYRRMKESDKARDIHQK 566
           +  L K + + K+  +AR++ ++
Sbjct: 676 YNALIKGFYKRKKFLEARELFEQ 698



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 223/436 (51%), Gaps = 9/436 (2%)

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           I  AL +  +  + G   +  ++N + + LC++G + +A  ++ +M      P+  +Y+ 
Sbjct: 234 IKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYST 293

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            I GYC+V EL + L L   M   G++PN  T+N ++  LCK G + +A + L E+++  
Sbjct: 294 VINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMIS-- 351

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
           +G A   VI +T L+D + K G+   A  L+++M ++ I  D + Y  +I G C  G + 
Sbjct: 352 EGIAPDGVIYTT-LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVM 410

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A   F +M+ +   PD +TY  L++  CK+GK+ EA   +  + + G+ P+ ++Y  + 
Sbjct: 411 EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALA 470

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            GLC  G++  A E L  M  K +    + +N +++G  + G++  A  +   M   G  
Sbjct: 471 DGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 530

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            +  T+  L+ A  +   +  A  L ++ML   + P V T+N+L+   C  G +    +L
Sbjct: 531 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 590

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
              ML +GI P+  TY  LIK +C R NM+   E++  +   G+  D   + IL      
Sbjct: 591 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNIL------ 644

Query: 554 MKESDKARDIHQKWLL 569
           +K   KAR++ + W L
Sbjct: 645 IKGHCKARNMKEAWFL 660



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 199/421 (47%), Gaps = 38/421 (9%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            VI  LC  GK+  A  + R+MI +G  PD + +  L++  CK+G++  A  +  EM + 
Sbjct: 328 GVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKR 387

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           + SP+  TY A I G C+   + +A  LF  M    + P+ VT+  L+   CK+G + +A
Sbjct: 388 KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEA 447

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                ++L       T +++T T L D   K G+   A  L ++M +K ++ +I  YN L
Sbjct: 448 FSLHNQML---QMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 504

Query: 303 INGFCLNGDISSAFAY----------------------FC-------------QMLKRGF 327
           +NG C  G+I  A                         +C             QML R  
Sbjct: 505 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 564

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P V+T+N L+N  C  G L++       + + G+ P+  +Y ++I+  CI  ++    E
Sbjct: 565 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 624

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M  K VVP+ + +N++I G+ +  ++  A+ +   M+  G +  V ++NALI    
Sbjct: 625 IYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFY 684

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +     +A  L ++M  +G+  D   YN+    + + G + L L+L DE + + +  DI 
Sbjct: 685 KRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQ 744

Query: 508 T 508
           T
Sbjct: 745 T 745



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 179/383 (46%), Gaps = 4/383 (1%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            ++ F         LD+A  LF  M N G+  +  + N+ +  L +     D +K   +V
Sbjct: 184 VFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDL---DGIKIALKV 240

Query: 250 LAD-DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
             +  +     +  +  I+  S  + G   +A  L   M  +    D+++Y+ +ING+C 
Sbjct: 241 FVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQ 300

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G++        +M  +G  P+  TYN ++  LCK GK+ EA      +   G+APD + 
Sbjct: 301 VGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 360

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y T+I G C  G++  A      M ++ + P+   +  +I G  + G +  A  +   M+
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 420

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
              +  +  T+ ALI    + G + +AFSL  +ML  G+ P++ TY  L    C  G + 
Sbjct: 421 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 480

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A +L  EM R+G+  +I TY  L+ G C  GN+ +A ++   ++  G   D + +  L 
Sbjct: 481 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 540

Query: 549 KRYRRMKESDKARDIHQKWLLRN 571
             Y + +E  +A ++ ++ L R 
Sbjct: 541 DAYCKSREMVRAHELLRQMLDRE 563



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 142/296 (47%), Gaps = 3/296 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE D   + A+I   C  GK+  A  L  +M+Q G  P+++T+  L + LCK G+++ A+
Sbjct: 424 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 483

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM       N  TYN+ + G C+   +D+A+ L   M   G  P+ VT+  L+ A 
Sbjct: 484 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 543

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   +  A + L ++L   D +    V+T  +LM+ +  +G       L   M +K I 
Sbjct: 544 CKSREMVRAHELLRQML---DRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIM 600

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +   YN LI  +C+  ++ +    +  M  +G +PD  TYN L+   CK   + EA   
Sbjct: 601 PNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFL 660

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           +  +   G      SY  +I+G       ++ARE    M  + +V +  I+N+  D
Sbjct: 661 HRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 716


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 220/433 (50%), Gaps = 3/433 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D      +I  LCL GK+  A+ L  +M++ G  PD++T+N +VN +C+ GD   A  
Sbjct: 155 EPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFD 214

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++R+M E     +  TY+  I   CR   +D A+ LF  M   GI+ + VT+N LV  LC
Sbjct: 215 MLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K G   D    L ++++ +      +VIT  +L+D + K G   +A  L+ +M  + I  
Sbjct: 275 KAGKWNDGALLLKDMVSRE---IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           +I+ YN L++G+C+   +S A      M++    PD++T+ +L+   C   ++D+    +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +SK G+  + ++Y  ++QG C  G I  A E    M+   V+P+   + +++DG    
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G L  A  I + +    +   +  +  +I    +GG + DA++L   +   G+ P+V TY
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
            ++I   C  G +  A  L  +M   G  P+  TY  LI+ H   G++  + ++  ++++
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571

Query: 535 LGLAIDHIPFRIL 547
            G + D    +++
Sbjct: 572 CGFSADASSIKMV 584



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 192/384 (50%), Gaps = 5/384 (1%)

Query: 166 IGDLEKADHV--IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           I D++K D +   +EM   RP P    ++ F +   R  + +  L     +  NGI  N 
Sbjct: 64  IVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI 123

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
            T NI+++  C+      A   LG+V+         D  T   L++     G   +A+ L
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLG---YEPDTTTFNTLINGLCLEGKVSKAVVL 180

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            + M +   Q D+V YN ++NG C +GD S AF    +M +R    DV TY+T+++ LC+
Sbjct: 181 VDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCR 240

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G +D A   +  +   G+    ++Y ++++GLC  G        L  M+ + +VP    
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +NV++D + + G L  A  +   M++ G+S N+ T+N L+        + +A ++   M+
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
            +   PD+ T+  LI   C +  +   ++++  + +RG+  + +TY+ L++G C  G +K
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420

Query: 524 EAEEVFAKIQTLGLAIDHIPFRIL 547
            AEE+F ++ + G+  D + + IL
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGIL 444



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 183/386 (47%), Gaps = 38/386 (9%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G   ++ T N ++N  C+      A  V+ ++ ++   P+  T+N  I G C   ++ KA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKA 177

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + L   M  NG +P+ VT+N +V+ +C+                                
Sbjct: 178 VVLVDRMVENGCQPDMVTYNSIVNGICR-------------------------------- 205

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
                 +GD   A  +   M ++N++ D+  Y+ +I+  C +G I +A + F +M  +G 
Sbjct: 206 ------SGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
              V+TYN+L+  LCK GK ++ +     +    + P+ I++  ++      G + +A E
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M+ + + P    +N ++DGY     LS A ++ DLM+    S ++ TF +LI    
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
               + D   + + +   G+  +  TY++L+   C  G I LA +L+ EM+  G+ PD++
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQ 533
           TY  L+ G C  G +++A E+F  +Q
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQ 465



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 180/365 (49%), Gaps = 3/365 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I  LC  G I  A+ L ++M  KG    V+T+N LV  LCK G      
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++++M      PN  T+N  +  + +  +L +A  L+  M   GI PN +T+N L+   
Sbjct: 284 LLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 343

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C +  L +A   L  ++ +   K + D++T T L+  Y         + ++ ++ ++ + 
Sbjct: 344 CMQNRLSEANNMLDLMVRN---KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            + V Y++L+ GFC +G I  A   F +M+  G LPDV+TY  LL+ LC  GKL++A   
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  L K+ +    + Y TII+G+C  G +  A     S+  K V P    + V+I G  +
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G LS A  +   M   G + N  T+N LI A  R G +  +  L +EM   G   D  +
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580

Query: 474 YNLLI 478
             ++I
Sbjct: 581 IKMVI 585



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 151/284 (53%), Gaps = 4/284 (1%)

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           I  +I   N++IN FC       A++   +++K G+ PD  T+NTL+N LC +GK+ +A 
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAV 178

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                + + G  PD ++Y +I+ G+C  GD   A + L  M E++V  +   ++ IID  
Sbjct: 179 VLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSL 238

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            R G +  A S+   M + G+ S+V T+N+L+    + G   D   L K+M+   I P+V
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            T+N+L+      G +  A +LY EM+ RGI+P+IITY  L+ G+C +  + EA  +   
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRN 571
           +     + D + F  L K Y  +K  D      R+I ++ L+ N
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 402



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 146/299 (48%), Gaps = 7/299 (2%)

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
           K  A+AL+ +M +      +V ++   +        +    +  Q+   G   ++ T N 
Sbjct: 69  KDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           ++NC C+  K   A    G + K G  PD  ++ T+I GLC+ G + KA   +  M+E  
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENG 188

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P+   +N I++G  R GD S AF +   M    V ++VFT++ +I +  R G I  A 
Sbjct: 189 CQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
           SL KEM   GI   V TYN L+   C  G  +    L  +M+ R I P++IT+  L+   
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARDIHQKWLLRNK 572
              G ++EA E++ ++ T G++ + I +  L   Y    R+ E++   D+    ++RNK
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL----MVRNK 363



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 139/295 (47%), Gaps = 39/295 (13%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A  L ++MI +G  P+++T+N L++  C    L +A++++  M   + SP+  T+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
            + I GYC V  +D  + +F  ++  G+  N VT++ILV   C+ G +  A +   E+++
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ---------------------- 289
                   DV+T  IL+D    NG   +AL ++ D+ +                      
Sbjct: 432 HG---VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488

Query: 290 -------------KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
                        K ++ +++ Y V+I+G C  G +S A     +M + G  P+  TYNT
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           L+    + G L  ++     +   G + D  S K +I  L + G++ K+   +LS
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML-LSGELDKSFLDMLS 602



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 110/241 (45%), Gaps = 4/241 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR     D     ++I+  C+  ++   + + R + ++G V + +T++ LV   C+ G +
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           + A+ + +EM      P+  TY   + G C   +L+KAL +F  +  + +    V +  +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  +CK G + DA      +          +V+T T+++    K G   +A  L   M +
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKG---VKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
                +   YN LI     +GD++++     +M   GF  D  +   +++ L   G+LD+
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL-SGELDK 595

Query: 350 A 350
           +
Sbjct: 596 S 596


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/414 (32%), Positives = 208/414 (50%), Gaps = 8/414 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M   G  PDV   N ++  L      +    V  EM ++   P+  TYN  +  + +  
Sbjct: 192 EMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEG 251

Query: 203 ELDKALHLFSTMAN--NGIRPNRVTHNILVHALCKKGLLGDAVKFL-GEVLADDDGKATS 259
             DK   L   M    +G  PN VTHN+++  L +KG L +A + + G  L+      T 
Sbjct: 252 RNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTY 311

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           + + + +L   + K  D  Q      +M  + I   +V YN +I+G   +G + +A   F
Sbjct: 312 NPLITGLLAKGFVKKADDLQL-----EMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKF 366

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M   G  PDVITYN+LLN  CK G L EA   +G L   G+AP  ++Y  +I G C  
Sbjct: 367 VEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRL 426

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           GD+ +AR     M+E+  +P+   + +++ G      L+ A    D MLS G+  + F +
Sbjct: 427 GDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAY 486

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N  I AE   G+I  AF L++ M+L+GI  D  TYN+LI   C  G+++ A  L  +M+ 
Sbjct: 487 NTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVH 546

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
            G+ PD ITYT LI  HC RG ++EA + F  + + GLA   + + +    Y R
Sbjct: 547 NGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCR 600



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/404 (33%), Positives = 202/404 (50%), Gaps = 4/404 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  L   G +  A  L+ +M  +G +P V+T+N +++ L + G +E A     EM  M 
Sbjct: 314 LITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMG 373

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYN+ + GYC+   L +AL LF  + + G+ P  +T+NIL+   C+ G L +A 
Sbjct: 374 LQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEAR 433

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E++   +     DV T TILM           A   +++M  K +Q D  AYN  I
Sbjct: 434 RLKEEMV---EQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRI 490

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
                 G I+ AF     M+  G   D +TYN L++ LCK G L++A      +   G+ 
Sbjct: 491 RAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQ 550

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD I+Y  +I   C  G + +AR+F   M+   + P    + V I  Y R G+L +A+  
Sbjct: 551 PDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGW 610

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              ML  GV  N  T+N LI A  R G    A+    EML  G+ P+ +TY LLI  +C 
Sbjct: 611 FRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCK 670

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            G+   A++ Y EM + GI PD +T+  L KG    G+M  A E
Sbjct: 671 EGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF-DEGHMNHAIE 713



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 210/408 (51%), Gaps = 8/408 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS---PNCATYNAFITGYC 199
           +M+Q G  P ++T+N L++   K G  +K   +++EM E R S   PN  T+N  ITG  
Sbjct: 227 EMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEM-ETRGSGCLPNDVTHNVVITGLA 285

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R  +L++A  +   M  +  + +  T+N L+  L  KG +  A     E+  +++G   +
Sbjct: 286 RKGDLEEAAEMVEGMRLSK-KASSFTYNPLITGLLAKGFVKKADDLQLEM--ENEGIMPT 342

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
            V+T   ++    ++G    A   + +M    +Q D++ YN L+NG+C  G +  A   F
Sbjct: 343 -VVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLF 401

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             +   G  P V+TYN L++  C+ G L+EA      + + G  PD  +Y  +++G    
Sbjct: 402 GDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNA 461

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
             +  AREF   ML K + P+   +N  I      G ++ AF +R++M+  G+SS+  T+
Sbjct: 462 CSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTY 521

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N LI    + G++ DA  L+ +M+ +G+ PD  TY  LI A C  G +  A + + +M+ 
Sbjct: 522 NILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMIS 581

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G+ P  +TYT  I  +C RGN+  A   F K+   G+  + I + +L
Sbjct: 582 DGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVL 629



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 213/440 (48%), Gaps = 41/440 (9%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G +P+ +THN ++  L + GDLE+A  ++  M  +    +  TYN  ITG      + KA
Sbjct: 269 GCLPNDVTHNVVITGLARKGDLEEAAEMVEGM-RLSKKASSFTYNPLITGLLAKGFVKKA 327

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA-VKFLGEVLADDDGKATSDVITSTI 266
             L   M N GI P  VT+N ++H L + G +  A VKF+ E+ A        DVIT   
Sbjct: 328 DDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFV-EMRAMG---LQPDVITYNS 383

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF---------- 316
           L++ Y K G   +AL L+ D+    +   ++ YN+LI+G+C  GD+  A           
Sbjct: 384 LLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG 443

Query: 317 -------------------------AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
                                     +F +ML +G  PD   YNT +      G + +A 
Sbjct: 444 CLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAF 503

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
               V+   G++ D ++Y  +I GLC  G++  A++  + M+   + P+   +  +I  +
Sbjct: 504 RLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAH 563

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
              G L  A      M+S G++ +  T+   I A  R G+++ A+   ++ML +G+ P+ 
Sbjct: 564 CERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNE 623

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TYN+LI A C  G   LA + + EML RG+ P+  TYT LI G+C  GN ++A   + +
Sbjct: 624 ITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFE 683

Query: 532 IQTLGLAIDHIPFRILKKRY 551
           +   G+  D++  + L K +
Sbjct: 684 MHQNGIHPDYLTHKALFKGF 703



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 175/370 (47%), Gaps = 4/370 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  L   G++  A     +M   G  PDV+T+N L+N  CK G L++A  +  ++   
Sbjct: 348 AMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHA 407

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P   TYN  I GYCR+ +L++A  L   M   G  P+  T+ IL+        L  A
Sbjct: 408 GLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMA 467

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +F  E+L+        D       + +    G   +A  L   M  + I +D V YN+L
Sbjct: 468 REFFDEMLSKG---LQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNIL 524

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C  G+++ A     +M+  G  PD ITY  L++  C++G L EA  F+  +   G+
Sbjct: 525 IDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGL 584

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           AP  ++Y   I   C  G++  A  +   MLE+ V P    +NV+I    R G    A+ 
Sbjct: 585 APSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYR 644

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
               ML  G+  N +T+  LI    + G+  DA     EM  +GI PD  T+  L     
Sbjct: 645 HFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALF-KGF 703

Query: 483 NLGHIHLALQ 492
           + GH++ A++
Sbjct: 704 DEGHMNHAIE 713



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 154/330 (46%), Gaps = 3/330 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   + +++   C  G +  AL L   +   G  P VLT+N L++  C++GDLE+A 
Sbjct: 374 LQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEAR 433

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM E    P+  TY   + G      L  A   F  M + G++P+   +N  + A 
Sbjct: 434 RLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAE 493

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
              G +  A + L EV+  +    +SD +T  IL+D   K G+   A  L   M    +Q
Sbjct: 494 LTLGAIAKAFR-LREVMMLEG--ISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQ 550

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D + Y  LI+  C  G +  A  +F  M+  G  P  +TY   ++  C++G L  A  +
Sbjct: 551 PDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGW 610

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  + + GV P++I+Y  +I  LC  G    A      MLE+ +VP  + + ++IDG  +
Sbjct: 611 FRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCK 670

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            G+  +A      M   G+  +  T  AL 
Sbjct: 671 EGNWEDAMRFYFEMHQNGIHPDYLTHKALF 700



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 163/363 (44%), Gaps = 6/363 (1%)

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           L  F  MA++G+ P+    N ++  L       D      E+L          ++T   L
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEML---QLGIEPSIVTYNTL 243

Query: 268 MDSYFKNGDKFQALALWNDMFQKN--IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           +DS+ K G   +   L  +M  +      + V +NV+I G    GD+  A A   + ++ 
Sbjct: 244 LDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEA-AEMVEGMRL 302

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
                  TYN L+  L  +G + +A      +   G+ P  ++Y  +I GL   G +  A
Sbjct: 303 SKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAA 362

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           +   + M    + P+   +N +++GY + G L  A  +   +   G++  V T+N LI  
Sbjct: 363 QVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDG 422

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             R G + +A  LK+EM+  G  PDV TY +L+  S N   + +A + +DEML +G+ PD
Sbjct: 423 YCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPD 482

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
              Y   I+     G + +A  +   +   G++ D + + IL     +    + A+D+  
Sbjct: 483 CFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQM 542

Query: 566 KWL 568
           K +
Sbjct: 543 KMV 545



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 4/196 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G +  A  L+ KM+  G  PD +T+  L++  C+ G L +A    ++M    
Sbjct: 524 LIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDG 583

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  TY  FI  YCR   L  A   F  M   G+ PN +T+N+L+HALC+ G    A 
Sbjct: 584 LAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAY 643

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+L   +     +  T T+L+D   K G+   A+  + +M Q  I  D + +  L 
Sbjct: 644 RHFHEML---ERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALF 700

Query: 304 NGFCLNGDISSAFAYF 319
            GF   G ++ A  Y 
Sbjct: 701 KGF-DEGHMNHAIEYL 715


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 219/417 (52%), Gaps = 3/417 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  GK G A+ L   M+ +G  PDV T+  ++N LCKIG+   A  + R+M E  
Sbjct: 198 LINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAG 257

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY+  I   C+   +++AL +FS M   GI PN  T+N L+  LC      +A 
Sbjct: 258 CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREAS 317

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E+++ +      +++T ++L++ + K G+ F+A  +   M +  ++ ++V Y+ L+
Sbjct: 318 AMLNEMMSLN---IMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLM 374

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG+ L  ++  A   F  M+ +G  PDV +YN L+N  CK  ++ EA   +  +   G+ 
Sbjct: 375 NGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLT 434

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +SY T+I GLC  G + +A +   +ML    +P+   +++++DG+ + G L+ AF +
Sbjct: 435 PDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRL 494

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M S  +  N+  +N LI A  +  ++ +A  L  E+ + G+ P+V  Y  +I   C 
Sbjct: 495 FRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCK 554

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            G +  AL+ +  M   G  P+  +Y  +I+G     +   A ++  +++  G   D
Sbjct: 555 EGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVAD 611



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 210/402 (52%), Gaps = 3/402 (0%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
             + L ++M   G  PD  T + L+N   ++  ++    V+ ++ ++       T+N  I
Sbjct: 140 AVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLI 199

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C+V +  +A+ LF  M   G +P+  T+  +++ LCK   +G+ V   G      + 
Sbjct: 200 NGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCK---IGETVAAAGLFRKMGEA 256

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               DV+T + ++DS  K+    +AL +++ M  K I  +I  YN LI G C       A
Sbjct: 257 GCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREA 316

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
            A   +M+    +P+++T++ L+N  CK+G + EA      +++ GV P+ ++Y +++ G
Sbjct: 317 SAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNG 376

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
             +  ++V+AR+    M+ K   P+   +N++I+GY +   +  A  + + M+  G++ +
Sbjct: 377 YSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPD 436

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           + ++N LI    + G + +A  L K ML +G  PD+ TY++L+   C  G++  A +L+ 
Sbjct: 437 IVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFR 496

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            M    + P+++ Y  LI   C   N+KEA ++F+++   GL
Sbjct: 497 AMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGL 538



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 196/394 (49%), Gaps = 3/394 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   +  +I  LC  G+   A  L RKM + G  PDV+T++ +++ LCK   + +A  
Sbjct: 224 QPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 283

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +   M     SPN  TYN+ I G C  +   +A  + + M +  I PN VT ++L++  C
Sbjct: 284 IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 343

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G + +A   L  +    +     +V+T + LM+ Y    +  +A  L++ M  K  + 
Sbjct: 344 KEGNVFEARGVLKTM---TEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKP 400

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D+ +YN+LING+C    I  A   F +M+ +G  PD+++YNTL++ LC+ G+L EA   +
Sbjct: 401 DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF 460

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G  PD  +Y  ++ G C  G + KA     +M    + P   ++N++ID   + 
Sbjct: 461 KNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 520

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
            +L  A  +   +   G+  NV  +  +I    + G + +A    + M  DG  P+ F+Y
Sbjct: 521 RNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSY 580

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
           N++I           A+QL  EM  +G   D+ T
Sbjct: 581 NVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 212/430 (49%), Gaps = 7/430 (1%)

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP-SPNCATYN 192
           I  AL     M+ +   P ++  N L++ + K+     A   + +  E+   SP+  T +
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I  + ++  +D    + + +   G++   VT N L++ LCK G  G AV+   +++A 
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                  DV T T +++   K G+   A  L+  M +   Q D+V Y+ +I+  C +  +
Sbjct: 222 G---YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRV 278

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           + A   F  M  +G  P++ TYN+L+  LC   +  EAS     +    + P+ +++  +
Sbjct: 279 NEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLL 338

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I   C  G++ +AR  L +M E  V P    ++ +++GY    ++  A  + D+M++ G 
Sbjct: 339 INIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGC 398

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +VF++N LI    +   I +A  L  EM+  G+ PD+ +YN LI   C LG +  A  
Sbjct: 399 KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHD 458

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK--- 549
           L+  ML  G  PD+ TY+ L+ G C +G + +A  +F  +Q+  L  + + + IL     
Sbjct: 459 LFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMC 518

Query: 550 RYRRMKESDK 559
           + R +KE+ K
Sbjct: 519 KSRNLKEARK 528



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 95/184 (51%), Gaps = 3/184 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I  LC  G++  A  L + M+  G +PD+ T++ L++  CK G L KA 
Sbjct: 433 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAF 492

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + R M      PN   YN  I   C+   L +A  LFS +   G++PN   +  +++ L
Sbjct: 493 RLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGL 552

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+GLL +A++    +  ++DG   ++  +  +++  + ++ D+ +A+ L  +M +K   
Sbjct: 553 CKEGLLDEALEAFRNM--EEDGCPPNE-FSYNVIIRGFLQHKDESRAVQLIGEMREKGFV 609

Query: 294 TDIV 297
            D+ 
Sbjct: 610 ADVA 613


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 145/506 (28%), Positives = 239/506 (47%), Gaps = 45/506 (8%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E LD L  +R T    C+   D   +  VI  L + G+I  A  L  +M+QKG VP+V+
Sbjct: 253 QEALDML--LRMTKGDGCS--PDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVV 308

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+N +V+ LCK   ++KA+ V+R+M +    P+  TY A I GY  +    +A  +F  M
Sbjct: 309 TYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEM 368

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G+ P+ VT N L+ +LCK     +A +    +          D+I+ +IL+  Y   
Sbjct: 369 TREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGH---KPDIISYSILLHGYATE 425

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G       L++ M    I  D   +N+LIN     G +  A   F +M  +G  P+V+TY
Sbjct: 426 GRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTY 485

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
            T++  LC+ G+L +A      +   G+ P+ + Y ++IQG C HGD++KA+E +  M++
Sbjct: 486 ATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMD 545

Query: 395 KSVVPEPHI-------------------------------------WNVIIDGYGRCGDL 417
           +  +P P+I                                     +N +IDGY   G +
Sbjct: 546 QG-IPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKM 604

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             AF + D M+S G   +V T++ LI    + G I D   L +EML   + P   TY+L+
Sbjct: 605 DKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLV 664

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           +      G    A +++ EM+  G    I TYT +++G C      EA  +F K+  + L
Sbjct: 665 LDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNL 724

Query: 538 AIDHIPFRILKKRYRRMKESDKARDI 563
             +      +     ++K  ++A D+
Sbjct: 725 KFEIAILNTMIHALYKVKRREEAHDL 750



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 209/490 (42%), Gaps = 82/490 (16%)

Query: 106 DTGP------VRCTLETDYRRHVAVIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNY 158
           D GP      +R  L TD       ++ LC   +   AL  L  +M + G VPD  ++N 
Sbjct: 182 DLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNT 241

Query: 159 LVNELCKIGDLEKA-DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
           ++  LC     ++A D ++R       SP+  +Y   I G     E+ KA +LF+ M   
Sbjct: 242 VIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQK 301

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G+ PN VT+N +VHALCK                    +A          MD        
Sbjct: 302 GVVPNVVTYNSIVHALCK-------------------ARA----------MD-------- 324

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +A  +   MF  +IQ D V Y  +I+G+   G    A   F +M + G +PD++T+N+L
Sbjct: 325 -KAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           ++ LCK  +  EA+  +  ++  G  PD ISY  ++ G    G  V       SM +  +
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           V + H +N++I+ + + G +  A  I   M   GVS NV T+  +I A  R G + DA  
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAME 503

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT-------------- 503
              +M+  G+ P+   Y+ LI   C  G +  A +L  EM+ +GI               
Sbjct: 504 KLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSL 563

Query: 504 ----------------------PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
                                 PDI T+  LI G+C  G M +A  V   + + G   D 
Sbjct: 564 CNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDV 623

Query: 542 IPFRILKKRY 551
           + +  L   Y
Sbjct: 624 VTYSTLINGY 633



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/462 (22%), Positives = 213/462 (46%), Gaps = 39/462 (8%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           +++ D   + A+I      G+   A  + ++M ++G +PD++T N L++ LCK    ++A
Sbjct: 337 SIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEA 396

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYC--------------------------------- 199
             +   ++     P+  +Y+  + GY                                  
Sbjct: 397 AEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINA 456

Query: 200 --RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
             +   +D+AL +F+ M   G+ PN VT+  ++ ALC+ G L DA++ L ++++   G  
Sbjct: 457 HAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISI--GLK 514

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI-QTDIVAYNVLINGFCLNGDISSAF 316
            + V+  + L+  +  +GD  +A  L ++M  + I + +I  ++ +I+  C  G + +A 
Sbjct: 515 PNTVVYHS-LIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQ 573

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F  ++  G  PD+ T+N+L++  C  GK+D+A      +   G  PD ++Y T+I G 
Sbjct: 574 DVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGY 633

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
              G I         ML K V P    +++++DG  R G  S A  +   M+  G + ++
Sbjct: 634 FKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSI 693

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+  ++    R     +A +L  ++    +  ++   N +I A   +     A  L+  
Sbjct: 694 STYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFAS 753

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
           +   G+ P+  TY  +I      G+++EA+ +F+ ++  G A
Sbjct: 754 VSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCA 795



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 191/412 (46%), Gaps = 45/412 (10%)

Query: 173 DHVIREMSEMRPSP-NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           + + RE +  R  P    TY   +   CR    D     F+ +   G+R + +  N  + 
Sbjct: 149 NRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLK 208

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            LC      +A+  L   +++       D  +   ++ S        +AL +   M + +
Sbjct: 209 CLCYAKRTDEALSMLLHRMSELG--CVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGD 266

Query: 292 -IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ------ 344
               D+V+Y ++I+G  + G+IS A   F +M+++G +P+V+TYN++++ LCK       
Sbjct: 267 GCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKA 326

Query: 345 -----------------------------GKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                                        G+  EA+  +  +++ G+ PD +++ +++  
Sbjct: 327 ELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDS 386

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY---GRCGDLSNAFSIRDLMLSFGV 432
           LC H    +A E   S+  K   P+   +++++ GY   GR  D++N F     M   G+
Sbjct: 387 LCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLF---HSMTDNGI 443

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
            ++   FN LI A  + G + +A  +  EM   G+ P+V TY  +I A C +G +  A++
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAME 503

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
              +M+  G+ P+ + Y  LI+G C  G++ +A+E+ +++   G+   +I F
Sbjct: 504 KLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITF 555



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 145/336 (43%), Gaps = 39/336 (11%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  VI  LC  G++  A+    +MI  G  P+ + ++ L+   C  GDL KA  ++ EM 
Sbjct: 485 YATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMM 544

Query: 181 EM---RPS---------------------------------PNCATYNAFITGYCRVNEL 204
           +    RP+                                 P+  T+N+ I GYC V ++
Sbjct: 545 DQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKM 604

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           DKA  +   M + G  P+ VT++ L++   K G + D +    E+L     +     +T 
Sbjct: 605 DKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCK---RVKPTTVTY 661

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           ++++D  F+ G    A  ++++M +      I  Y +++ G C N     A   F ++  
Sbjct: 662 SLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGA 721

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
                ++   NT+++ L K  + +EA   +  +S +G+ P+  +Y  +I  L   G + +
Sbjct: 722 MNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEE 781

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           A     SM +    P   + N II    + G++  A
Sbjct: 782 ADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKA 817



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 130/267 (48%), Gaps = 3/267 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC  G++  A  +   +I  G  PD+ T N L++  C +G ++KA  V+  M   
Sbjct: 558 SIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSA 617

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY+  I GY +   +D  L LF  M    ++P  VT+++++  L + G    A
Sbjct: 618 GTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAA 677

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   E++  + G A S + T TI++    +N    +A+ L++ +   N++ +I   N +
Sbjct: 678 KKMFHEMI--ESGTAMS-ISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTM 734

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+          A   F  +   G +P+  TY  ++  L K+G ++EA   +  + KTG 
Sbjct: 735 IHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGC 794

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFL 389
           AP       II+ L   G+IVKA  ++
Sbjct: 795 APSSRLLNDIIRMLLQKGEIVKAGYYM 821



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 72/159 (45%), Gaps = 4/159 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +++ LC       A+ L  K+       ++   N +++ L K+   E+A  +   +S
Sbjct: 696 YTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVS 755

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN +TY   I    +   +++A  +FS+M   G  P+    N ++  L +KG + 
Sbjct: 756 ASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIV 815

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            A  ++ +V    DG   S   ++T L+ S F +  +++
Sbjct: 816 KAGYYMSKV----DGTIISLEASTTSLLISLFASKGRYR 850



 Score = 38.9 bits (89), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 45/99 (45%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VP+  T+  ++  L K G +E+AD +   M +   +P+    N  I    +  E+ KA
Sbjct: 758 GLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKA 817

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
            +  S +    I     T ++L+     KG   + +KFL
Sbjct: 818 GYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKFL 856


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 210/405 (51%), Gaps = 3/405 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M ++   PDV+THN L++   + GD++ A  ++  M+     P   TYN+ + G C+  
Sbjct: 182 EMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHR 241

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
             DKA  +F TM    + P+  + NIL+   C+ G + +AVKF  E+        T DV+
Sbjct: 242 RFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEM---QHRYVTPDVV 298

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           + + L+  + + G+   A A   +M    +  D V Y ++I GFC  G +S A     +M
Sbjct: 299 SFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM 358

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           +  G LPDV+TYNTLLN LCKQ +L +A      + + GV PD  ++ T+I G C  G+ 
Sbjct: 359 VGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNF 418

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A +   ++L + + P+   +N +IDG  R GDL+ A  + D M +  +  N  T++ L
Sbjct: 419 ENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSIL 478

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I +    G + DAF    EM+  G  P++ TYN +I   C  G++    Q   +M +  +
Sbjct: 479 IDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNV 538

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            PD+IT+  LI G+    NM  A  VF  ++   +  D + + ++
Sbjct: 539 FPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMI 583



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 124/395 (31%), Positives = 215/395 (54%), Gaps = 3/395 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           +C++  D R    +I   C  G++  A+   ++M  +   PDV++ + L+    + G+++
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMD 314

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A   +REM  +   P+   Y   I G+CR   + +AL +   M   G  P+ VT+N L+
Sbjct: 315 HAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLL 374

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           + LCK+  L DA K L E+   ++   T D+ T T L+  Y + G+   AL L++ + ++
Sbjct: 375 NGLCKQHRLLDAEKLLNEM---EERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQ 431

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            ++ D+V YN LI+G C  GD++ A   +  M  R  LP+ ITY+ L++  C++G++++A
Sbjct: 432 RLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDA 491

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
             F   + K G  P+  +Y +II+G C  G++ K ++FL  M + +V P+   +N +I G
Sbjct: 492 FGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHG 551

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           Y +  ++  AF++ ++M    V  +  T+N +I   +  G++ DA  + K M   GI PD
Sbjct: 552 YIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPD 611

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
            +TY  LI      G+   A QL+DEM+ RG  PD
Sbjct: 612 RYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 227/460 (49%), Gaps = 4/460 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           RC    D   H  +I      G +  A+ L   M  +G  P ++T+N ++  LCK    +
Sbjct: 186 RCVF-PDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFD 244

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           KA  V R M +   +P+  ++N  I G+CRV E+ +A+  +  M +  + P+ V+ + L+
Sbjct: 245 KAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI 304

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
               ++G +  A  +L E+          D +  T+++  + + G   +AL + ++M   
Sbjct: 305 GLFSRRGEMDHAGAYLREMKGLG---LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGF 361

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
               D+V YN L+NG C    +  A     +M +RG  PD+ T+ TL++  C+QG  + A
Sbjct: 362 GCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENA 421

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +  L +  + PD ++Y ++I G+C  GD+ KA E    M  + ++P    ++++ID 
Sbjct: 422 LQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDS 481

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           +   G + +AF   D M+  G   N+ T+N++I    R G++       ++M  D +FPD
Sbjct: 482 HCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPD 541

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           + T+N LI       ++H A  +++ M +  + PD +TY  +I G   +GNM++A  VF 
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFK 601

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            +   G+  D   +  L   +     S +A  +H + + R
Sbjct: 602 GMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHR 641



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 202/400 (50%), Gaps = 3/400 (0%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           +  T N +V+  CK  + + AD VI EM +    P+  T+N  I    R  ++D A+ L 
Sbjct: 156 NAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
            +MAN G++P  VT+N ++  LCK      A +    +   D      DV +  IL+  +
Sbjct: 216 DSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM---DQCSVAPDVRSFNILIGGF 272

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            + G+  +A+  + +M  + +  D+V+++ LI  F   G++  A AY  +M   G +PD 
Sbjct: 273 CRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDG 332

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           + Y  ++   C+ G + EA      +   G  PD ++Y T++ GLC    ++ A + L  
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNE 392

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M E+ V P+   +  +I GY R G+  NA  + D +L   +  +V T+N+LI    R G 
Sbjct: 393 MEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGD 452

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           +  A  L  +M    I P+  TY++LI + C  G +  A    DEM+++G  P+I TY  
Sbjct: 453 LAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNS 512

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +IKG+C  GN+K+ ++   K++   +  D I F  L   Y
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGY 552



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 208/418 (49%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +V++ LC   +   A  + R M Q    PDV + N L+   C++G++++A    +EM   
Sbjct: 232 SVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHR 291

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  +++  I  + R  E+D A      M   G+ P+ V + +++   C+ G + +A
Sbjct: 292 YVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEA 351

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++   E++         DV+T   L++   K      A  L N+M ++ +  D+  +  L
Sbjct: 352 LRVRDEMVG---FGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTL 408

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G+C  G+  +A   F  +L++   PDV+TYN+L++ +C++G L +A+  +  +    +
Sbjct: 409 IHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREI 468

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ I+Y  +I   C  G +  A  FL  M++K  +P    +N II GY R G++     
Sbjct: 469 LPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQ 528

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
               M    V  ++ TFN LI    +  ++  AF++   M  + + PD  TYN++I    
Sbjct: 529 FLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFS 588

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             G++  A +++  M   GI PD  TY  LI GH   GN K+A ++  ++   G A D
Sbjct: 589 EQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 183/364 (50%), Gaps = 4/364 (1%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P P  A+ NA +    R      A   +  + ++    N  T NI+VH+ CK      A 
Sbjct: 119 PVPASAS-NALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGAD 177

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             + E+   +      DV+T  +L+D+ F+ GD   A+AL + M  + ++  IV YN ++
Sbjct: 178 TVISEM---EKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVL 234

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C +     A   F  M +    PDV ++N L+   C+ G++ EA  FY  +    V 
Sbjct: 235 KGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVT 294

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +S+  +I      G++  A  +L  M    +VP+  I+ ++I G+ R G +S A  +
Sbjct: 295 PDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV 354

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
           RD M+ FG   +V T+N L+    +   + DA  L  EM   G+ PD+ T+  LI   C 
Sbjct: 355 RDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCR 414

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G+   ALQL+D +LR+ + PD++TY  LI G C +G++ +A E++  +    +  +HI 
Sbjct: 415 QGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHIT 474

Query: 544 FRIL 547
           + IL
Sbjct: 475 YSIL 478



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 192/392 (48%), Gaps = 7/392 (1%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P+P    ++  I  Y +  +  +A   F  + ++ +       N L+  L + G    A 
Sbjct: 83  PTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQ 142

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +    VL+ D   +  +  T  I++ SY K  +   A  + ++M ++ +  D+V +NVLI
Sbjct: 143 EAYRLVLSSD---SEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLI 199

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +     GD+ +A A    M  RG  P ++TYN++L  LCK  + D+A   +  + +  VA
Sbjct: 200 DARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVA 259

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  S+  +I G C  G++ +A +F   M  + V P+   ++ +I  + R G++ +A + 
Sbjct: 260 PDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAY 319

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+  +   +  +I    R GS+ +A  ++ EM+  G  PDV TYN L+   C 
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCK 379

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              +  A +L +EM  RG+TPD+ T+T LI G+C +GN + A ++F  +    L  D + 
Sbjct: 380 QHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVT 439

Query: 544 FRILKKRYRRMKESDKAR----DIHQKWLLRN 571
           +  L     R  +  KA     D+H + +L N
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREILPN 471



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 106/256 (41%), Gaps = 38/256 (14%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  L  D   + ++I  +C  G +  A  L   M  +  +P+ +T++ L++  C+ G +
Sbjct: 429 LRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQV 488

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E A   + EM +    PN  TYN+ I GYCR   + K       M  + + P+ +T N L
Sbjct: 489 EDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTL 548

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +H                                       Y K  +   A  ++N M +
Sbjct: 549 IHG--------------------------------------YIKEENMHGAFNVFNIMEK 570

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           + ++ D V YN++INGF   G++  A   F  M   G  PD  TY +L+N     G   +
Sbjct: 571 EMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQ 630

Query: 350 ASHFYGVLSKTGVAPD 365
           A   +  +   G APD
Sbjct: 631 AFQLHDEMIHRGFAPD 646



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 96/220 (43%), Gaps = 35/220 (15%)

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           RE + S+L  S  P+P +++++I  Y +      AF    L+L   V       NAL+  
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAV 131

Query: 446 ETRGG----------------SIFDAFSLK-------KEMLLDG------------IFPD 470
            +R G                S  +A++L        K +  DG            +FPD
Sbjct: 132 LSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPD 191

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V T+N+LI A    G +  A+ L D M  RG+ P I+TY  ++KG C      +A+EVF 
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFR 251

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            +    +A D   F IL   + R+ E  +A   +++   R
Sbjct: 252 TMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHR 291


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 246/497 (49%), Gaps = 51/497 (10%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQ-------KGTVPDVLTHNYLVNELCKIGDLEKADHV 175
            +++ LC  GKI  AL L ++M+        K   PDV T + L++ LCK G + +A+ +
Sbjct: 310 TLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANEL 369

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           +  M +     +  TY+  I G C  + + +A  LF +M   G RP+ +T+  L+  LC+
Sbjct: 370 LEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQ 429

Query: 236 KGLLGDAVKFLGEVLADDDG---KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
            G +  A++   E+L D      K    +I+ +I++D   K+  + +A  L+ +M  + I
Sbjct: 430 TGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGI 489

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D+++Y  LI+GFCL+G    A   F +ML  G  PDV T + L++ LCK+GK+ EA+ 
Sbjct: 490 MPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANK 549

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP------------- 399
              V+ + G   D ++  T+++GLC+   I KA +  L M +   +P             
Sbjct: 550 LLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLC 609

Query: 400 --------------------------EPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
                                     +P+   +++IIDG  +CG    A  +   M + G
Sbjct: 610 QSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALG 669

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           V  +V ++ +LI    R G   DA  L  EM+  G+ PDV T+++LI   C  G +  A 
Sbjct: 670 VIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEAN 729

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +L + M++RG  P+ +TYT L+KG C    + EA ++F K+Q LG   D + +  L K  
Sbjct: 730 ELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGL 789

Query: 552 RRMKESDKARDIHQKWL 568
            +      A ++H+K L
Sbjct: 790 CQTGNIKTALELHKKML 806



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 223/500 (44%), Gaps = 56/500 (11%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I+ LC+  +I  A WL   M + G  PD +T+  L+  LC+ G++  A  + 
Sbjct: 381 DIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLH 440

Query: 177 REMSE------MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +EM        ++  P   +Y+  I G C+    D+A  LF  M   GI P+ +++  L+
Sbjct: 441 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLI 500

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           H  C  G    A     E+L   D     DV TS++L+D   K G   +A  L   + Q+
Sbjct: 501 HGFCLSGKWEKAKCLFNEML---DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQR 557

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL------------ 338
               D+V    L+ G C+   IS A   F +M K G +P+V+T  TL+            
Sbjct: 558 GCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIA 617

Query: 339 ----------------NC-------------LCKQGKLDEASHFYGVLSKTGVAPDQISY 369
                           NC             LCK G+ DEA   +  +   GV PD ISY
Sbjct: 618 LELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISY 677

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            ++I G C  G    A+     M++  V P+   ++V+ID   + G +  A  + ++M+ 
Sbjct: 678 TSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQ 737

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G   N  T+  L+        I +A  L  +M   G  PDV TY  L+   C  G+I  
Sbjct: 738 RGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKT 797

Query: 490 ALQLYDEMLR------RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           AL+L+ +ML           PD+I+Y+ +I G C  G   EA E+F +++ LG+  + I 
Sbjct: 798 ALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVIS 857

Query: 544 FRILKKRYRRMKESDKARDI 563
           +  L   + R  + + A+ +
Sbjct: 858 YTSLIHGFCRSGKLEDAKHL 877



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 220/426 (51%), Gaps = 11/426 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I   CL GK   A  L  +M+  G  PDV T + L++ LCK G + +A+ ++
Sbjct: 492 DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLL 551

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             + +     +  T    + G C  + + KA  LF  M   G  PN VT   L+  LC+ 
Sbjct: 552 EVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQS 611

Query: 237 GLLGDAVKFLGEVLADDDG---KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           G +  A++    +L+D          + I+ +I++D   K G + +A  L+ +M    + 
Sbjct: 612 GNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVI 671

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+++Y  LI+GFC +G    A   F +M+  G  PDV T++ L++ LCK+GK+ EA+  
Sbjct: 672 PDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANEL 731

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             V+ + G  P+ ++Y T+++GLC++  I +A +  + M +   +P+   +  ++ G  +
Sbjct: 732 LEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 791

Query: 414 CGDLSNAFSIRDLMLS----FGVS--SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
            G++  A  +   MLS    +G +   +V +++ +I    + G   +A  L KEM   G+
Sbjct: 792 TGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGV 851

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            P+V +Y  LI   C  G +  A  L++EM+ +G+  + +TY+ +I G C  G + +A  
Sbjct: 852 IPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA-- 909

Query: 528 VFAKIQ 533
           +F K++
Sbjct: 910 LFQKME 915



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 232/488 (47%), Gaps = 50/488 (10%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKG------TVPDVLTHNYLVNELCKIGDLEKADHVI 176
            +++ LC  G I  AL L ++M+           P +++++ +++ LCK    ++A  + 
Sbjct: 422 TLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF 481

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P+  +Y   I G+C   + +KA  LF+ M + GI+P+  T ++L+  LCKK
Sbjct: 482 EEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKK 541

Query: 237 GLLGDAVKFL--------------------GEVLADDDGKATS------------DVITS 264
           G + +A K L                    G  +     KAT             +V+T 
Sbjct: 542 GKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTC 601

Query: 265 TILMDSYFKNGDKFQALALWNDMFQK------NIQTDIVAYNVLINGFCLNGDISSAFAY 318
             LM    ++G+   AL L  +M         N + + ++Y+++I+G C  G    A   
Sbjct: 602 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 661

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           F +M   G +PDVI+Y +L++  C+ GK  +A + +  +   GV PD  ++  +I  LC 
Sbjct: 662 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 721

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G +++A E L  M+++  +P    +  ++ G      +S A  +   M   G   +V T
Sbjct: 722 EGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVT 781

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLD------GIFPDVFTYNLLIGASCNLGHIHLALQ 492
           +  L+    + G+I  A  L K+ML D         PDV +Y+++I   C  G    A +
Sbjct: 782 YGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARE 841

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           L+ EM   G+ P++I+YT LI G C  G +++A+ +F ++   G+ ++ + + ++   + 
Sbjct: 842 LFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFC 901

Query: 553 RMKESDKA 560
           +  + DKA
Sbjct: 902 KEGQIDKA 909



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 200/422 (47%), Gaps = 10/422 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + ++I   C  GK   A  L  +M+  G  PDV T   L++  CK G + +A+ ++
Sbjct: 199 DVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELL 258

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M       +  TY+  I G C  + + +A  LF +M   G RP+ + +  L+  LC+ 
Sbjct: 259 EVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQT 318

Query: 237 GLLGDAVKFLGEVLADDDGKATS----DVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           G +  A+    E+L D           DV TS++L+D   K G   +A  L   M Q+  
Sbjct: 319 GKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGC 378

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             DIV Y+ LI G C+   IS A   F  M K G  PD ITY TL+  LC+ G ++ A  
Sbjct: 379 ILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQ 438

Query: 353 FYG-VLSKTG-----VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
            +  +L+ TG       P  ISY  II GLC      +ARE    M  + ++P+   +  
Sbjct: 439 LHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTT 498

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +I G+   G    A  + + ML  G+  +V T + LI    + G + +A  L + ++  G
Sbjct: 499 LIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG 558

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
              DV T   L+   C    I  A QL+ +M + G  P+++T   L+KG C  GN+K A 
Sbjct: 559 CILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIAL 618

Query: 527 EV 528
           E+
Sbjct: 619 EL 620



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 232/475 (48%), Gaps = 22/475 (4%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           ++  D      +I  LC  GK+  A  L   MIQ+G + D++T++ L+  LC    + +A
Sbjct: 49  SIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEA 108

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN----GI--RPNRVTH 226
             +   M ++   P+  TY   + G C+   ++ AL L   M N+    GI  +P  +++
Sbjct: 109 TWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISY 168

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           +I++  LCK     +A +   E+ A        DVI+ T L+  +  +G   +A  L+N+
Sbjct: 169 SIIIDGLCKDRREDEARELFKEMKAQG---MMPDVISYTSLIHGFCHSGKWEKAKCLFNE 225

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M    IQ D+    VLI+ FC  G +  A      M+ RG + D++TY+TL+  LC + +
Sbjct: 226 MLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHR 285

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE-------KSVVP 399
           + EA+  +  + K G  PD I+Y T+++GLC  G I  A      ML        K + P
Sbjct: 286 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRP 345

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +    +++ID   + G +  A  + ++M+  G   ++ T++ LI        I +A  L 
Sbjct: 346 DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLF 405

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML----RRGI--TPDIITYTELI 513
             M   G  PD  TY  L+   C  G+I++ALQL+ EML    R GI   P +I+Y+ +I
Sbjct: 406 MSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIII 465

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            G C      EA E+F +++  G+  D I +  L   +    + +KA+ +  + L
Sbjct: 466 DGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 520



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 172/357 (48%), Gaps = 35/357 (9%)

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G+ P+  T NIL++ LC        VK + E LA   G          I+   Y      
Sbjct: 5   GLFPDSFTFNILINCLCN-------VKRVNEGLAAMAG----------IMRRGYIP---- 43

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
                   D+   +I+ D+   ++LI+  C  G +  A      M++RG + D++TY+TL
Sbjct: 44  --------DIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTL 95

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS- 396
           +  LC + ++ EA+  +  + K G  PD I+Y T+++GLC  G+I  A +    ML  + 
Sbjct: 96  IKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTG 155

Query: 397 ---VVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
              +  +P +  +++IIDG  +      A  +   M + G+  +V ++ +LI      G 
Sbjct: 156 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGK 215

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
              A  L  EML  GI PDV T  +LI   C  G +  A +L + M+ RG   DI+TY+ 
Sbjct: 216 WEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYST 275

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           LIKG C +  + EA ++F  ++ LG   D I +  L K   +  + + A  +HQ+ L
Sbjct: 276 LIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEML 332



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 141/288 (48%), Gaps = 9/288 (3%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           + DT P     + +   +  +I  LC  G+   A  L ++M   G +PDV+++  L++  
Sbjct: 625 LSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 684

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           C+ G  + A ++  EM ++   P+  T++  I   C+  ++ +A  L   M   G  PN 
Sbjct: 685 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNT 744

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           VT+  LV  LC    + +A +   ++          DV+T   LM    + G+   AL L
Sbjct: 745 VTYTTLVKGLCMNDRISEATQLFMKM---QKLGCLPDVVTYGTLMKGLCQTGNIKTALEL 801

Query: 284 WNDM------FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
              M      +  N + D+++Y+++I+G C +G    A   F +M   G +P+VI+Y +L
Sbjct: 802 HKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSL 861

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           ++  C+ GKL++A H +  +   GV  + ++Y  +I G C  G I KA
Sbjct: 862 IHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 2/116 (1%)

Query: 102 KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           K + DTG      + D   +  +I  LC  G+   A  L ++M   G +P+V+++  L++
Sbjct: 804 KMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIH 863

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
             C+ G LE A H+  EM +     N  TY+  I G+C+  ++DKA  LF  M  N
Sbjct: 864 GFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 917



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 9/97 (9%)

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY---------TEL 512
           M L G+FPD FT+N+LI   CN+  ++  L     ++RRG  PDI+TY         + L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           I   C  G + EA E+   +   G  +D + +  L K
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIK 97


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/419 (31%), Positives = 216/419 (51%), Gaps = 6/419 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI      G++  A  L  +M+Q+G VPDV+T++  ++ LCK   ++KA+ V+R+M    
Sbjct: 233 VIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNG 292

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYN  I GY  + +  +   +F  M   G+ P+  T N  + +LCK G   +A 
Sbjct: 293 FEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAA 352

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +F   + A        D++T ++L+  Y   G     L L+N M    I  D   YN+LI
Sbjct: 353 EFFDSMAAKGH---KPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILI 409

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           + +   G +  A   F QM +RG +PD  TY T++    + G+L +A   +  +   G+ 
Sbjct: 410 DAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLK 469

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH--IWNVIIDGYGRCGDLSNAF 421
           PD I Y ++IQG C+HG++VKA+E +  M+ +  +P P+   +N II+   + G +  A 
Sbjct: 470 PDTIVYNSLIQGFCMHGNLVKAKELISEMMSRG-IPRPNTVFFNSIINSLCKEGRVVEAQ 528

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            I DL++  G   +V TFN+LI      G +  AF +   M+  GI PDV TY+ L+   
Sbjct: 529 DIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGY 588

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           C  G I   L L+ EML +G+ P  ITY  ++ G    G    A+++  ++   G  +D
Sbjct: 589 CRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMD 647



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 210/478 (43%), Gaps = 44/478 (9%)

Query: 123 AVIRDLCLGGKIGTALW---LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
           A  RD   G  +  AL+    R +   +  +P V T+N L++  C+         +    
Sbjct: 89  ATCRD---GPSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRF 145

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGL 238
            +     +    N  +   C     D A++ L   M   G+ P+ ++++ ++ +LC+   
Sbjct: 146 LKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSR 205

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
              A+  L   +    G  + +V++   ++  +F+ G+  +A  L+++M Q+ +  D+V 
Sbjct: 206 SQRALDLL-HTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVT 264

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL--------------------- 337
           Y+  I+  C    +  A     QM+  GF PD +TYN +                     
Sbjct: 265 YSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMT 324

Query: 338 --------------LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
                         ++ LCK GK  EA+ F+  ++  G  PD ++Y  ++ G    G +V
Sbjct: 325 RRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVV 384

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
                  SM    +V +  ++N++ID YG+ G +  A  I   M   GV  + +T+  +I
Sbjct: 385 DMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVI 444

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            A +R G + DA     +M+  G+ PD   YN LI   C  G++  A +L  EM+ RGI 
Sbjct: 445 AAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIP 504

Query: 504 -PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            P+ + +  +I   C  G + EA+++F  +  +G   D I F  L   Y  + + +KA
Sbjct: 505 RPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKA 562



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 180/401 (44%), Gaps = 2/401 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +   L L   M   G V D   +N L++   K G +++A  +  +M E    P+  TY
Sbjct: 381 GYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTY 440

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I  + R+  L  A+  F+ M   G++P+ + +N L+   C  G L  A + + E+++
Sbjct: 441 GTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMS 500

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
              G    + +    +++S  K G   +A  +++ +     + D++ +N LI+G+ L G 
Sbjct: 501 R--GIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGK 558

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  AF     M+  G  PDV+TY+ LL+  C+ G++D+    +  +   GV P  I+Y  
Sbjct: 559 MEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGI 618

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           I+ GL   G  V A++    M+E     +     +I+ G  R      A ++   + +  
Sbjct: 619 ILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMN 678

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           V  N+   N +I A  +     +A  L   +   G+ P+  TY ++I      G +  A 
Sbjct: 679 VKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEAD 738

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            ++  M + G  P       +I+    +G + +A    +K+
Sbjct: 739 NMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKV 779



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 145/293 (49%), Gaps = 3/293 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC  G++  A  +   +I  G  PDV+T N L++    +G +EKA  V+  M  +
Sbjct: 513 SIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISV 572

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY+A + GYCR   +D  L LF  M + G++P  +T+ I++H L   G    A
Sbjct: 573 GIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGA 632

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   E++   +   T D+ T  I++    +N    +A+AL+  +   N++ +I   N +
Sbjct: 633 KKMCHEMI---ESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTM 689

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+          A   F  +   G +P+  TY  ++  L K+G ++EA + + ++ K+G 
Sbjct: 690 IDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGC 749

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
           AP       II+ L   G+I KA  +L  +  K++  E    ++++  + R G
Sbjct: 750 APSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKG 802



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 101/236 (42%), Gaps = 3/236 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   + A++   C  G+I   L L R+M+ KG  P  +T+  +++ L   G    A 
Sbjct: 574 IEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAK 633

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM E   + + +T    + G CR N  D+A+ LF  +    ++ N    N ++ A+
Sbjct: 634 KMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAM 693

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K     +A +    + A        +  T  +++ +  K G   +A  +++ M +    
Sbjct: 694 YKVRKREEANELFDSISATG---LVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCA 750

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
                 N +I      G+IS A  Y  ++  +    +  T + +L+   ++GK  E
Sbjct: 751 PSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYRE 806


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/434 (29%), Positives = 217/434 (50%), Gaps = 8/434 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G    AL L  +M+ K   P  +T+N +   LCK G++E+A+ ++ +M  +  + +C
Sbjct: 337 CRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHC 396

Query: 189 ATYNAFITGYC-RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             +N  +     R   L+  + + + M   G+RPN       +  LCK G   +AV    
Sbjct: 397 GLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWF 456

Query: 248 EVLADDDGK--ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           + L    G   ATS+ +   +    Y K     +A  +   M  K I+ D + YN++I G
Sbjct: 457 KTLNKGLGVNLATSNALIHGLCEGKYMK-----EATKVIQTMLNKGIELDSITYNIMIRG 511

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C +  +  A      M +RGF PD+ T+NTLL+  C  GK++E  H    +   G+ PD
Sbjct: 512 CCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPD 571

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            +SY TII G C   DI KA+E+L  ++++ + P   I+N +I GYGR GD+S A    +
Sbjct: 572 IVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVE 631

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M S G+     T+ +L+      G + +A ++  +   + +   V  Y ++I   C LG
Sbjct: 632 TMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLG 691

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  A+  ++EM  RGI+P+ +TYT L+  +   GN +EA ++F ++   G+  D+I + 
Sbjct: 692 KMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYG 751

Query: 546 ILKKRYRRMKESDK 559
            L  R   +   DK
Sbjct: 752 TLIARCSEVNSLDK 765



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 220/486 (45%), Gaps = 33/486 (6%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L+     +  ++  LC  G++  A  L+ +M Q G  P V+T   L+N L +     
Sbjct: 249 RAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFG 308

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +   V++EM ++  SPN   YN  I  +CR     +AL LF  M    ++P  VT+N++ 
Sbjct: 309 EVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIA 368

Query: 231 HALCKKGLLGDAVKFLGEVLA------------------------DDDGKATSDVITS-- 264
            ALCK+G +  A + L ++L+                        +     T++++T   
Sbjct: 369 KALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGM 428

Query: 265 -------TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
                  T  M    K G   +A+ +W     K +  ++   N LI+G C    +  A  
Sbjct: 429 RPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATK 488

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
               ML +G   D ITYN ++   CK  K++EA   +G +++ G  PD  ++ T++   C
Sbjct: 489 VIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYC 548

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G + +    L  M  + + P+   +  IIDG+ +  D+  A      ++  G+  NVF
Sbjct: 549 NLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVF 608

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            +NALI    R G I  A    + M  +GI P   TY  L+   C+ G +  A  ++ + 
Sbjct: 609 IYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQA 668

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
               +   +I YT +I+G+C  G M EA   F ++++ G++ + + +  L   Y +   S
Sbjct: 669 RENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNS 728

Query: 558 DKARDI 563
           ++A  +
Sbjct: 729 EEASKL 734



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 198/450 (44%), Gaps = 42/450 (9%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP-SPNCATYNAFITGYCR 200
           R +  +G  P + T N  +  L + G L+ A  V  EM E R  + N  +Y A I   C+
Sbjct: 174 RVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCK 233

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
             ++D    + + +   G++P  VT+N+L+ ALCK G + +A +  G +   + G  T  
Sbjct: 234 AGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM---EQGGMTPS 290

Query: 261 VITSTILMDSYFKNGDKFQALAL-WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           V+T  IL++     G++F  + +   +M Q  +  + V YN LI   C  G  S A   F
Sbjct: 291 VVTFGILING-LARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLF 349

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY------------------------- 354
            +M+ +   P  +TYN +   LCK+G+++ A                             
Sbjct: 350 DEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQR 409

Query: 355 -----GVLSKT------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
                 V+S T      G+ P+       ++ LC  G   +A       L K +      
Sbjct: 410 TRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLAT 469

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
            N +I G      +  A  +   ML+ G+  +  T+N +I    +   + +A  L  +M 
Sbjct: 470 SNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMT 529

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             G  PD+FT+N L+ A CNLG +     L D+M   G+ PDI++Y  +I GHC   +++
Sbjct: 530 RRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIR 589

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           +A+E   ++   GL  +   +  L   Y R
Sbjct: 590 KAKEYLTELMDRGLKPNVFIYNALIGGYGR 619



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 179/393 (45%), Gaps = 3/393 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           ++ + + +  +M+ +G  P+       + ELCK G  ++A  +  +        N AT N
Sbjct: 412 RLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSN 471

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
           A I G C    + +A  +  TM N GI  + +T+NI++   CK   + +A+K  G++   
Sbjct: 472 ALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRR 531

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                  D+ T   L+ +Y   G   +   L + M  + +Q DIV+Y  +I+G C   DI
Sbjct: 532 G---FKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDI 588

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A  Y  +++ RG  P+V  YN L+    + G +  A      +   G+ P  ++Y ++
Sbjct: 589 RKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSL 648

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           +  +C  G + +A+       E +V      + ++I GY + G +  A +  + M S G+
Sbjct: 649 MYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGI 708

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           S N  T+  L+ A ++ G+  +A  L  EM+  G+ PD  TY  LI     +  +   + 
Sbjct: 709 SPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIG 768

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
              E+    +T D   Y  L  G  A    KEA
Sbjct: 769 HTAELSSGALTKDDRMYNILSNGINAPWCQKEA 801



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 166/356 (46%), Gaps = 3/356 (0%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
            A +R+LC GGK   A+ +  K + KG   ++ T N L++ LC+   +++A  VI+ M  
Sbjct: 436 TACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLN 495

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
                +  TYN  I G C+ +++++A+ L   M   G +P+  T N L+HA C  G + +
Sbjct: 496 KGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEE 555

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
               L ++  +       D+++   ++D + K  D  +A     ++  + ++ ++  YN 
Sbjct: 556 TFHLLDQMKTEG---LQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNA 612

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LI G+  NGDIS A      M   G  P  +TY +L+  +C  G ++EA   +    +  
Sbjct: 613 LIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENN 672

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V    I Y  +IQG C  G +V+A  +   M  + + P    +  ++  Y + G+   A 
Sbjct: 673 VDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEAS 732

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
            + D M+  GV  +  T+  LI   +   S+        E+    +  D   YN+L
Sbjct: 733 KLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNIL 788



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 141/280 (50%), Gaps = 8/280 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           +KE    ++TM + G     +E D   +  +IR  C   K+  A+ L   M ++G  PD+
Sbjct: 483 MKEATKVIQTMLNKG-----IELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDL 537

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T N L++  C +G +E+  H++ +M      P+  +Y   I G+C+  ++ KA    + 
Sbjct: 538 FTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTE 597

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           + + G++PN   +N L+    + G +  A+  + E +  +  + T+  +T   LM     
Sbjct: 598 LMDRGLKPNVFIYNALIGGYGRNGDISGAIDAV-ETMKSNGIQPTN--VTYGSLMYWMCH 654

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +A  +++   + N+   ++ Y ++I G+C  G +  A AYF +M  RG  P+ +T
Sbjct: 655 AGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLT 714

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
           Y TL+    K G  +EAS  +  +  +GV PD I+Y T+I
Sbjct: 715 YTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 754



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 177/417 (42%), Gaps = 46/417 (11%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D L H ++ +     G L +A    R +S     P+  T NAF+    R  +LD A  +F
Sbjct: 151 DFLIHTFITSP--AQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVF 208

Query: 212 STM-ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
             M  +  +  N  ++  ++ ALCK G +    + L E                      
Sbjct: 209 DEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAE---------------------- 246

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                       LW    +  +Q  +V YNVL++  C +G +  AF    +M + G  P 
Sbjct: 247 ------------LW----RAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPS 290

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+T+  L+N L +  +  E       + + GV+P+++ Y  +I   C  G   +A     
Sbjct: 291 VVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFD 350

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN---ALILAET 447
            M+ K + P    +N+I     + G++  A  I + MLS G++ +   FN   A +L  T
Sbjct: 351 EMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRT 410

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           R   +    S+  EM+  G+ P+       +   C  G    A+ ++ + L +G+  ++ 
Sbjct: 411 R--RLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLA 468

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
           T   LI G C    MKEA +V   +   G+ +D I + I+ +   +  + ++A  +H
Sbjct: 469 TSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLH 525



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 3/248 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  GK+     L  +M  +G  PD++++  +++  CK  D+ KA   + E+ +    PN 
Sbjct: 548 CNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNV 607

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             YNA I GY R  ++  A+    TM +NGI+P  VT+  L++ +C  GL+ +A     +
Sbjct: 608 FIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQ 667

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
              ++       VI  TI++  Y K G   +A+A + +M  + I  + + Y  L+  +  
Sbjct: 668 ARENN---VDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSK 724

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           +G+   A   F +M+  G +PD ITY TL+    +   LD+       LS   +  D   
Sbjct: 725 SGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRM 784

Query: 369 YKTIIQGL 376
           Y  +  G+
Sbjct: 785 YNILSNGI 792



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 7/229 (3%)

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE-KSVVPEPH 402
           QG L  A+  + VLS  G  P   +    ++ L   G +  ARE    M E ++V    +
Sbjct: 163 QGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEY 222

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +  +I    + G +   F +   +   G+   V T+N L+ A  + G + +AF LK  M
Sbjct: 223 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 282

Query: 463 LLDGIFPDVFTYNLLIGASCN---LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
              G+ P V T+ +LI         G + + LQ   EM + G++P+ + Y ELI  HC +
Sbjct: 283 EQGGMTPSVVTFGILINGLARGERFGEVGIVLQ---EMEQLGVSPNEVIYNELIGWHCRK 339

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+  +A  +F ++    +    + + ++ K   +  E ++A  I +  L
Sbjct: 340 GHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDML 388



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 3/194 (1%)

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML-SFGVSSNVF 437
            G + +A +    +  +   P     N  ++   R G L  A  + D M  S  V+ N +
Sbjct: 163 QGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEY 222

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           ++ A+I A  + G +   F +  E+   G+ P V TYN+L+ A C  G +  A +L   M
Sbjct: 223 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 282

Query: 498 LRRGITPDIITYTELIKGHCARGN-MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
            + G+TP ++T+  LI G  ARG    E   V  +++ LG++ + + +  L   + R   
Sbjct: 283 EQGGMTPSVVTFGILING-LARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGH 341

Query: 557 SDKARDIHQKWLLR 570
             +A  +  + +L+
Sbjct: 342 CSQALRLFDEMVLK 355



 Score = 43.1 bits (100), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+  C  GK+  A+    +M  +G  P+ LT+  L+    K G+ E+A  +  EM 
Sbjct: 680 YTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMV 739

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL----CKK 236
                P+  TY   I     VN LDK +   + +++  +  +   +NIL + +    C+K
Sbjct: 740 GSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILSNGINAPWCQK 799


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 220/439 (50%), Gaps = 3/439 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC  G +  +  L  +M + G  PDV+T+N L++   K+G LE+   +  EM ++
Sbjct: 294 VMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDV 353

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  I  YC+  ++ +A   FS M NNG++PN VT++ L+ A CK+G++  A
Sbjct: 354 GCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGA 413

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K   ++          +  T T L+D+  K G+  +A  L NDM Q  ++ +IV Y  L
Sbjct: 414 IKLFVDM---RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 470

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G C  G +  A   F  MLK G  P+   Y  L++   K  ++++A      +++  +
Sbjct: 471 LDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI 530

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD I Y +II G C    + + +  L  M  + +   P I   IID Y + G  S+A +
Sbjct: 531 KPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALN 590

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
               M   GV + + T+  LI    + G +  A      ML  G+ P+V  Y  LI   C
Sbjct: 591 FFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLC 650

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               I  A +L+DEM  RG+TPDI  +T LI G+   GN++EA  + +++  L +  D  
Sbjct: 651 KNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLH 710

Query: 543 PFRILKKRYRRMKESDKAR 561
            +  L   + +  E  +AR
Sbjct: 711 VYTSLVSGFSQCGELHQAR 729



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 197/411 (47%), Gaps = 9/411 (2%)

Query: 138 LWLRRKMIQKGT-VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           LW  R +   G+ V DVL   ++     ++G LE+A+     M   R  P   + N  + 
Sbjct: 208 LWSTRNICVSGSGVFDVLFSVFV-----ELGLLEEANECFSRMRNFRTLPKARSCNFLLH 262

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
              +          F+ M   GI P+  T+N+++  LCK+G L ++ +   ++    +  
Sbjct: 263 RLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQM---REMG 319

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
            + DV+T   L+D Y K G   +  +L+N+M       DI+ YN LIN +C    +  AF
Sbjct: 320 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAF 379

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            YF +M   G  P+V+TY+TL++  CK+G +  A   +  + +TG+ P++ +Y ++I   
Sbjct: 380 EYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDAN 439

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G++ +A + L  ML+  V      +  ++DG  + G +  A  +   ML  G+S N 
Sbjct: 440 CKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQ 499

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
             + AL+    +   + DA  + K+M    I PD+  Y  +I   C+   +     + +E
Sbjct: 500 QVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEE 559

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           M  RGI+ + +  T +I  +   G   +A   F ++Q +G+    + + +L
Sbjct: 560 MKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 610



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 186/378 (49%), Gaps = 3/378 (0%)

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             ++   + +  +  L++A   FS M N    P   + N L+H L K G      KF  +
Sbjct: 220 GVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFND 279

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           ++    G A S V T  +++D   K GD   +  L+  M +  +  D+V YN LI+G+  
Sbjct: 280 MIGA--GIAPS-VFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGK 336

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G +    + F +M   G +PD+ITYN L+NC CK  K+  A  ++  +   G+ P+ ++
Sbjct: 337 VGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVT 396

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y T+I   C  G +  A +  + M    ++P    +  +ID   + G+L+ A+ + + ML
Sbjct: 397 YSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML 456

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             GV  N+ T+ AL+    + G + +A  + + ML DGI P+   Y  L+        + 
Sbjct: 457 QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERME 516

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A+++  +M    I PD+I Y  +I GHC++  ++E + +  ++++ G++ + +    + 
Sbjct: 517 DAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTII 576

Query: 549 KRYRRMKESDKARDIHQK 566
             Y +  +S  A +  Q+
Sbjct: 577 DAYFKAGKSSDALNFFQE 594



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 181/370 (48%), Gaps = 8/370 (2%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MR TG     L  +   + ++I   C  G +  A  L   M+Q G   +++T+  L++ L
Sbjct: 420 MRRTG-----LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 474

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           CK G + +A+ V R M +   SPN   Y A + GY +   ++ A+ +   M    I+P+ 
Sbjct: 475 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL 534

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           + +  ++   C +  L +    L E+     G + + VI++TI+ D+YFK G    AL  
Sbjct: 535 ILYGSIIWGHCSQRKLEETKLILEEM--KSRGISANPVISTTII-DAYFKAGKSSDALNF 591

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           + +M    ++  IV Y VLI+G C  G +  A  YFC+ML  G  P+V  Y +L++ LCK
Sbjct: 592 FQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCK 651

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
              ++ A   +  +   G+ PD  ++  +I G   HG++ +A   +  M E ++  + H+
Sbjct: 652 NNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHV 711

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +  ++ G+ +CG+L  A    + M+  G+         L+    + G + +A  LK EM 
Sbjct: 712 YTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEME 771

Query: 464 LDGIFPDVFT 473
             G+  +  T
Sbjct: 772 RMGLITESAT 781



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/395 (23%), Positives = 181/395 (45%), Gaps = 3/395 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ +   +  +I   C  G +  A+ L   M + G +P+  T+  L++  CK G+L +A 
Sbjct: 390 LKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAW 449

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M +     N  TY A + G C+   + +A  +F +M  +GI PN+  +  LVH  
Sbjct: 450 KLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGY 509

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K   + DA+K L ++    +     D+I    ++  +       +   +  +M  + I 
Sbjct: 510 IKAERMEDAMKILKQM---TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGIS 566

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            + V    +I+ +   G  S A  +F +M   G    ++TY  L++ LCK G ++ A  +
Sbjct: 567 ANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDY 626

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  +   G+ P+   Y ++I GLC +  I  A++    M  + + P+   +  +IDG  +
Sbjct: 627 FCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLK 686

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G+L  A  +   M    +  ++  + +L+   ++ G +  A     EM+  GI P+   
Sbjct: 687 HGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVL 746

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
              L+      G +  A++L +EM R G+  +  T
Sbjct: 747 CICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 137/439 (31%), Positives = 220/439 (50%), Gaps = 3/439 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC  G +  +  L  +M + G  PDV+T+N L++   K+G LE+   +  EM ++
Sbjct: 235 VMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDV 294

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  I  YC+  ++ +A   FS M NNG++PN VT++ L+ A CK+G++  A
Sbjct: 295 GCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGA 354

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K L ++          +  T T L+D+  K G+  +A  L NDM Q  ++ +IV Y  L
Sbjct: 355 IKLLXDMRRTG---LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 411

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G C  G +  A   F  MLK G  P+   Y  L++   K  ++++A      +++  +
Sbjct: 412 LDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI 471

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD I Y +II G C    + + +  L  M  + +   P I   IID Y + G  S+A +
Sbjct: 472 KPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALN 531

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
               M   GV + + T+  LI      G +  A      ML  G+ P+V  Y  LI   C
Sbjct: 532 FFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLC 591

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               I  A +L+DEM  RG+TPDI  +T LI G+   GN++EA  + +++  L +  D  
Sbjct: 592 XNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLH 651

Query: 543 PFRILKKRYRRMKESDKAR 561
            +  L   + +  E  +AR
Sbjct: 652 VYTSLVSGFSQCGELHQAR 670



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 186/378 (49%), Gaps = 3/378 (0%)

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             ++   + +  +  L++A   FS M N    P   + N L+H L K G      KF  +
Sbjct: 161 GVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFND 220

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           ++    G A S V T  +++D   K GD   +  L+  M +  +  D+V YN LI+G+  
Sbjct: 221 MIGA--GIAPS-VFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGK 277

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G +    + F +M   G +PD+ITYN L+NC CK  K+  A  ++  +   G+ P+ ++
Sbjct: 278 VGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVT 337

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y T+I   C  G +  A + L  M    ++P    +  +ID   + G+L+ A+ + + ML
Sbjct: 338 YSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML 397

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             GV  N+ T+ AL+    + G + +A  + + ML DGI P+   Y  L+        + 
Sbjct: 398 QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERME 457

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A+++  +M    I PD+I Y  +I GHC++  ++E + +  ++++ G++ + +    + 
Sbjct: 458 DAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTII 517

Query: 549 KRYRRMKESDKARDIHQK 566
             Y +  +S  A +  Q+
Sbjct: 518 DAYFKAGKSSDALNFFQE 535



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 196/411 (47%), Gaps = 9/411 (2%)

Query: 138 LWLRRKMIQKGT-VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           LW  R +   G+ V DVL   ++     ++G LE+A+     M   R  P   + N  + 
Sbjct: 149 LWSTRNICVSGSGVFDVLFSVFV-----ELGLLEEANECFSRMRNFRTLPKARSCNFLLH 203

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
              +          F+ M   GI P+  T+N+++  LCK+G L ++ +   ++    +  
Sbjct: 204 RLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQM---REMG 260

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
            + DV+T   L+D Y K G   +  +L+N+M       DI+ YN LIN +C    +  AF
Sbjct: 261 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAF 320

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            YF +M   G  P+V+TY+TL++  CK+G +  A      + +TG+ P++ +Y ++I   
Sbjct: 321 EYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDAN 380

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G++ +A + L  ML+  V      +  ++DG  + G +  A  +   ML  G+S N 
Sbjct: 381 CKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQ 440

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
             + AL+    +   + DA  + K+M    I PD+  Y  +I   C+   +     + +E
Sbjct: 441 QVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEE 500

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           M  RGI+ + +  T +I  +   G   +A   F ++Q +G+    + + +L
Sbjct: 501 MKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 551



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 177/362 (48%), Gaps = 8/362 (2%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  MR TG     L  +   + ++I   C  G +  A  L   M+Q G   +++T+  L+
Sbjct: 358 LXDMRRTG-----LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALL 412

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           + LCK G + +A+ V R M +   SPN   Y A + GY +   ++ A+ +   M    I+
Sbjct: 413 DGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIK 472

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P+ + +  ++   C +  L +    L E+     G + + VI++TI+ D+YFK G    A
Sbjct: 473 PDLILYGSIIWGHCSQRKLEETKLILEEM--KSRGISANPVISTTII-DAYFKAGKSSDA 529

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           L  + +M    ++  IV Y VLI+G C  G +  A  YFC+ML  G  P+V  Y +L++ 
Sbjct: 530 LNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDG 589

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           LC    ++ A   +  +   G+ PD  ++  +I G   HG++ +A   +  M E ++  +
Sbjct: 590 LCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFD 649

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
            H++  ++ G+ +CG+L  A    + M+  G+         L+    + G + +A  LK 
Sbjct: 650 LHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKN 709

Query: 461 EM 462
           EM
Sbjct: 710 EM 711


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 133/419 (31%), Positives = 216/419 (51%), Gaps = 6/419 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  L   G++  A  L  +M+Q+G VPDV+T+  +++ LCK   ++KA+ V+R+M    
Sbjct: 233 VIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNG 292

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYN  I GY    +  +   +F  M + G+ PN VT N  + +LCK G   +A 
Sbjct: 293 FQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAA 352

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +F   + A        +++T ++L+  Y   G     L L+N M    I  D   +N++I
Sbjct: 353 EFFDSMAAKGH---KPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVI 409

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           + +   G +      F QM ++G +PD  TY  ++    + G+L +A   +  +   G+ 
Sbjct: 410 DAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLK 469

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAF 421
           P+ I Y ++IQG C+HG++VKA+E +  M+ +  +P P+I  +N II+   + G +  A 
Sbjct: 470 PEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRG-IPRPNIVFFNSIINSLCKEGRVVEAH 528

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            I D ++  G   +V TFN+LI      G I  AF +   M+  GI PDV +YN LI   
Sbjct: 529 DIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGY 588

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           C  G I   L L+ EML +G+ P  ITY  ++ G    G    A+++  ++   G  +D
Sbjct: 589 CRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMD 647



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 169/335 (50%), Gaps = 1/335 (0%)

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L   M   G+ P+ +++N +V  LC+      A+  L   +    G  + +V+T   ++ 
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLL-HTMVKKSGGCSPNVVTYNTVIH 235

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
             F+ G+  +A  L+++M Q+ +  D+V Y  +I+  C    +  A     QM+  GF P
Sbjct: 236 GLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQP 295

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           + +TYN +++     G+  E +  +  ++  G+ P+ ++  + +  LC HG   +A EF 
Sbjct: 296 NKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFF 355

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
            SM  K   P    ++V++ GY   G   +  ++ + M   G+ ++   FN +I A  + 
Sbjct: 356 DSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKR 415

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + +   +  +M   G+ PD  TY ++I A   +G +  A+  +++M+  G+ P+ I Y
Sbjct: 416 GMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVY 475

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
             LI+G C  GN+ +A+E+ +++ + G+   +I F
Sbjct: 476 HSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVF 510



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 185/416 (44%), Gaps = 2/416 (0%)

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
           L L   M   G V D    N +++   K G +++   +  +M E    P+  TY   I  
Sbjct: 387 LNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAA 446

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
           + R+  L  A+  F+ M   G++P  + ++ L+   C  G L  A + + E+++   G  
Sbjct: 447 FSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSR--GIP 504

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
             +++    +++S  K G   +A  +++ +     + D++ +N LI+G+ L G I  AF 
Sbjct: 505 RPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFG 564

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
               M+  G  PDV++YNTL++  C+ G++D+    +G +   GV P  I+Y  I+ GL 
Sbjct: 565 VLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLF 624

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G  V A++    M+E     +     +I+ G  R      A ++   + +  V  N+ 
Sbjct: 625 NDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIA 684

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
             N +I A  +     +A  L   +   G+ P+  TY ++I      G +  A  ++  M
Sbjct: 685 IINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLM 744

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
            + G  P       +I+    +G + +A     K+    ++++     +L   + R
Sbjct: 745 EKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSR 800



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 143/293 (48%), Gaps = 3/293 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC  G++  A  +   +I  G  PDV+T N L++    +G +EKA  V+  M   
Sbjct: 513 SIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISA 572

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  +YN  I GYCR   +D  L LF  M + G++P  +T+ I++H L   G    A
Sbjct: 573 GIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGA 632

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   E++   +   T D+ T  I++    +N    +A+A++  +   N++ +I   N +
Sbjct: 633 KKMCHEMI---ESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTM 689

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+          A   F  +   G +P+  TY  ++  L K+G ++EA + + ++ K+G 
Sbjct: 690 IDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGC 749

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
           AP       II+ L   G+IVKA  ++  +  K +  E    ++++  + R G
Sbjct: 750 APSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREG 802



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/244 (21%), Positives = 95/244 (38%), Gaps = 38/244 (15%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +   +E D   +  +I   C  G+I   L L  +M+ KG  P  +T+  +++ L   G  
Sbjct: 570 ISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRT 629

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A  +  EM E   + + +T    + G CR N  D+A+ +F  +    ++ N    N +
Sbjct: 630 VGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTM 689

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           + A+ K             V   ++ K   D I++T L+                     
Sbjct: 690 IDAMYK-------------VRKREEAKELFDSISATGLV--------------------- 715

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
            N  T    Y V+I      G +  A   F  M K G  P     N ++  L ++G++ +
Sbjct: 716 PNAST----YGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVK 771

Query: 350 ASHF 353
           A ++
Sbjct: 772 AGNY 775


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 220/433 (50%), Gaps = 3/433 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D      +I+ L L GK+  A+ L  +M++ G  PDV+T+N +VN +C+ GD   A  
Sbjct: 145 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 204

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++R+M E     +  TY+  I   CR   +D A+ LF  M   GI+ + VT+N LV  LC
Sbjct: 205 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 264

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K G   D    L ++++ +      +VIT  +L+D + K G   +A  L+ +M  + I  
Sbjct: 265 KAGKWNDGALLLKDMVSRE---IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 321

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           +I+ YN L++G+C+   +S A      M++    PD++T+ +L+   C   ++D+    +
Sbjct: 322 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 381

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +SK G+  + ++Y  ++QG C  G I  A E    M+   V+P+   + +++DG    
Sbjct: 382 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 441

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G L  A  I + +    +   +  +  +I    +GG + DA++L   +   G+ P+V TY
Sbjct: 442 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 501

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
            ++I   C  G +  A  L  +M   G  P+  TY  LI+ H   G++  + ++  ++++
Sbjct: 502 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 561

Query: 535 LGLAIDHIPFRIL 547
            G + D    +++
Sbjct: 562 CGFSADASSIKMV 574



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 192/384 (50%), Gaps = 5/384 (1%)

Query: 166 IGDLEKADHV--IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           I D++K D +   +EM   RP P+   ++ F +   R  + +  L     +  NGI  N 
Sbjct: 54  IVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI 113

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
            T NI+++  C+      A   LG+V+         D  T   L+   F  G   +A+ L
Sbjct: 114 YTLNIMINCFCRCCKTCFAYSVLGKVMKLG---YEPDTTTFNTLIKGLFLEGKVSEAVVL 170

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            + M +   Q D+V YN ++NG C +GD S A     +M +R    DV TY+T+++ LC+
Sbjct: 171 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 230

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G +D A   +  +   G+    ++Y ++++GLC  G        L  M+ + +VP    
Sbjct: 231 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 290

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +NV++D + + G L  A  +   M++ G+S N+ T+N L+        + +A ++   M+
Sbjct: 291 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 350

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
            +   PD+ T+  LI   C +  +   ++++  + +RG+  + +TY+ L++G C  G +K
Sbjct: 351 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 410

Query: 524 EAEEVFAKIQTLGLAIDHIPFRIL 547
            AEE+F ++ + G+  D + + IL
Sbjct: 411 LAEELFQEMVSHGVLPDVMTYGIL 434



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 186/381 (48%), Gaps = 8/381 (2%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           LD L+ M +       ++ D   +  +I  LC  G I  A+ L ++M  KG    V+T+N
Sbjct: 203 LDLLRKMEER-----NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 257

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            LV  LCK G       ++++M      PN  T+N  +  + +  +L +A  L+  M   
Sbjct: 258 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 317

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           GI PN +T+N L+   C +  L +A   L  ++ +   K + D++T T L+  Y      
Sbjct: 318 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN---KCSPDIVTFTSLIKGYCMVKRV 374

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
              + ++ ++ ++ +  + V Y++L+ GFC +G I  A   F +M+  G LPDV+TY  L
Sbjct: 375 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 434

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           L+ LC  GKL++A   +  L K+ +    + Y TII+G+C  G +  A     S+  K V
Sbjct: 435 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 494

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P    + V+I G  + G LS A  +   M   G + N  T+N LI A  R G +  +  
Sbjct: 495 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 554

Query: 458 LKKEMLLDGIFPDVFTYNLLI 478
           L +EM   G   D  +  ++I
Sbjct: 555 LIEEMKSCGFSADASSIKMVI 575



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 194/397 (48%), Gaps = 3/397 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L ++MI+   +P ++  +   + + +           +++     + N  T N  I 
Sbjct: 62  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 121

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            +CR  +   A  +   +   G  P+  T N L+  L  +G + +AV  +  ++   +  
Sbjct: 122 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV---ENG 178

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              DV+T   +++   ++GD   AL L   M ++N++ D+  Y+ +I+  C +G I +A 
Sbjct: 179 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 238

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           + F +M  +G    V+TYN+L+  LCK GK ++ +     +    + P+ I++  ++   
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
              G + +A E    M+ + + P    +N ++DGY     LS A ++ DLM+    S ++
Sbjct: 299 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 358

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            TF +LI        + D   + + +   G+  +  TY++L+   C  G I LA +L+ E
Sbjct: 359 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 418

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           M+  G+ PD++TY  L+ G C  G +++A E+F  +Q
Sbjct: 419 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 455



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 149/284 (52%), Gaps = 4/284 (1%)

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           I  +I   N++IN FC       A++   +++K G+ PD  T+NTL+  L  +GK+ EA 
Sbjct: 109 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 168

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                + + G  PD ++Y +I+ G+C  GD   A + L  M E++V  +   ++ IID  
Sbjct: 169 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 228

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            R G +  A S+   M + G+ S+V T+N+L+    + G   D   L K+M+   I P+V
Sbjct: 229 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 288

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            T+N+L+      G +  A +LY EM+ RGI+P+IITY  L+ G+C +  + EA  +   
Sbjct: 289 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 348

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRN 571
           +     + D + F  L K Y  +K  D      R+I ++ L+ N
Sbjct: 349 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 392



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 109/473 (23%), Positives = 207/473 (43%), Gaps = 78/473 (16%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A  L ++MI +G  P+++T+N L++  C    L +A++++  M   + SP+  T+
Sbjct: 302 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 361

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
            + I GYC V  +D  + +F  ++  G+  N VT++ILV   C+ G +  A +   E+++
Sbjct: 362 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 421

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ---------------------- 289
                   DV+T  IL+D    NG   +AL ++ D+ +                      
Sbjct: 422 HG---VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 478

Query: 290 -------------KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
                        K ++ +++ Y V+I+G C  G +S A     +M + G  P+  TYNT
Sbjct: 479 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 538

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII-------QGLCIHGDIVKAREFL 389
           L+    + G L  ++     +   G + D  S K +I       + L +   + K  +  
Sbjct: 539 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSR 598

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             +LE S   +  + ++       C  ++ + ++ + + + G++S     +   L + R 
Sbjct: 599 QDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNV-NTIEARGMNSAELNRD---LRKLRR 654

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL-------------GH---------- 486
            S+   F  +   +L  +  ++ T+ L   A C+L              H          
Sbjct: 655 SSVLKKFKNRDVRVL--VTNELLTWGLE-DAECDLMVDLELPTDAVHYAHRAGRMRRPGR 711

Query: 487 ---IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
              +  A +L+ EM++RGI P+ ITY+ LI G C    + EA ++   + T G
Sbjct: 712 KMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 145/299 (48%), Gaps = 7/299 (2%)

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
           K  A+AL+ +M +      +V ++   +        +    +  Q+   G   ++ T N 
Sbjct: 59  KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 118

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           ++NC C+  K   A    G + K G  PD  ++ T+I+GL + G + +A   +  M+E  
Sbjct: 119 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 178

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P+   +N I++G  R GD S A  +   M    V ++VFT++ +I +  R G I  A 
Sbjct: 179 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 238

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
           SL KEM   GI   V TYN L+   C  G  +    L  +M+ R I P++IT+  L+   
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARDIHQKWLLRNK 572
              G ++EA E++ ++ T G++ + I +  L   Y    R+ E++   D+    ++RNK
Sbjct: 299 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL----MVRNK 353



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 126/311 (40%), Gaps = 49/311 (15%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  +C GGK+  A  L   +  KG  P+V+T+  +++ LCK G L +A+ ++R+M 
Sbjct: 466 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 525

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   +PN  TYN  I  + R  +L  +  L   M + G   +  +  +++       LL 
Sbjct: 526 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM-----LLS 580

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL-WNDMFQKNIQTDIVAY 299
              +           K+  D++             +K +  +L +  MF  N  T  +  
Sbjct: 581 AMKRLTLRYCLSKGSKSRQDLLE--------LSGSEKIRLSSLTFVKMFPCNTITTSLNV 632

Query: 300 NVL----INGFCLNGDI-----SSAFAYF----------------------CQMLKRGFL 328
           N +    +N   LN D+     SS    F                      C ++    L
Sbjct: 633 NTIEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLEL 692

Query: 329 P-DVITYNTLLNCLCKQGK---LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           P D + Y      + + G+   +  A   +  + + G+AP+ I+Y ++I G C    + +
Sbjct: 693 PTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDE 752

Query: 385 AREFLLSMLEK 395
           A + L  M+ K
Sbjct: 753 ANQMLDLMVTK 763


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 217/424 (51%), Gaps = 3/424 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LCL G++     L      +G VP  + +N L++  C+ GD+ +   ++ EM    
Sbjct: 282 MVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKG 341

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P   TY A I    R ++L K   L   M   G+ PN   +N +++ALCK      A+
Sbjct: 342 IMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQAL 401

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L +++A    +   DV+T   L+ ++ + GD  +AL L  +  ++ ++ + ++Y  LI
Sbjct: 402 AVLNQMVAS---RFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLI 458

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GFC+ G++  A     +M+ RG  PDV+T   L++ L   G++DEA      +++  V 
Sbjct: 459 HGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVM 518

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD   Y  +I GLC    +  A+  L+ MLE+ V P+  ++  +IDG+ R   LS+A  I
Sbjct: 519 PDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKI 578

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   G   ++  +NA+I    + G + +A      M   G  PD FTY  LI     
Sbjct: 579 FEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAK 638

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G I  AL+   +M++R   P+I+TY  LI G+C  GN   AE +FA +Q+ GL  + + 
Sbjct: 639 KGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVH 698

Query: 544 FRIL 547
           + +L
Sbjct: 699 YTVL 702



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 183/383 (47%), Gaps = 6/383 (1%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           KI + LW   +M ++G  P+V  +N ++  LCK     +A  V+ +M   R  P+  T+N
Sbjct: 364 KIESLLW---EMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFN 420

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I  +CR  ++++AL L        + PN++++  L+H  C +G +  A   L E++  
Sbjct: 421 TLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGR 480

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                T DV+T   L+     +G   +AL +   M ++ +  D   YNVLI+G C    +
Sbjct: 481 GH---TPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRML 537

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           S+A     +ML++   PD   Y TL++   +  KL +A   +  + + G   D ++Y  +
Sbjct: 538 SAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAM 597

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I+G C  G + +A   + SM +   +P+   +  +IDGY + GD+  A      M+    
Sbjct: 598 IKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRC 657

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             N+ T+ +LI      G+   A  L   M  +G+FP+V  Y +LIG+         A  
Sbjct: 658 KPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAA 717

Query: 493 LYDEMLRRGITPDIITYTELIKG 515
            ++ ML    +P+  T   L+ G
Sbjct: 718 YFEHMLLNHCSPNDATMHYLVNG 740



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 192/416 (46%), Gaps = 24/416 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G +  AL L R+ I++   P+ L++  L++  C  G++  A  ++ EM    
Sbjct: 422 LIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRG 481

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  T  A I G     ++D+AL +   MA   + P+   +N+L+  LCKK +L  A 
Sbjct: 482 HTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAK 541

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E+L   + K   D    T L+D + ++     A  ++  M +K    DIVAYN +I
Sbjct: 542 NLLVEML---EQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMI 598

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G+C +G ++ A      M K G +PD  TY TL++   K+G +  A  F   + K    
Sbjct: 599 KGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCK 658

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y ++I G C  G+   A     SM  + + P    + V+I    +      A + 
Sbjct: 659 PNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAY 718

Query: 424 RDLMLSFGVSSNVFTFNALI--LAETRGG----------------SIFDAFSLKKEMLLD 465
            + ML    S N  T + L+  L   R G                ++ D F   K ++ D
Sbjct: 719 FEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVF---KGLISD 775

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           G+ P +  YN +I + C    +  A++L ++M  +G  PD +T+  L+ G  + G 
Sbjct: 776 GLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGK 831



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 167/362 (46%), Gaps = 28/362 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  L + G++  AL +R KM ++  +PD   +N L++ LCK   L  A +++ EM E 
Sbjct: 491 ALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQ 550

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +  P+   Y   I G+ R ++L  A  +F  M   G   + V +N ++   CK G++ +A
Sbjct: 551 KVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEA 610

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V  +  +          D  T T L+D Y K GD   AL    DM ++  + +IV Y  L
Sbjct: 611 VMCMSSM---RKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASL 667

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G+C  G+  SA   F  M   G  P+V+ Y  L+  L K+ K  +A+ ++  +     
Sbjct: 668 ICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHC 727

Query: 363 APDQISYKTIIQGL--CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           +P+  +   ++ GL  C +G I             S   + H  + ++D +         
Sbjct: 728 SPNDATMHYLVNGLTNCRYGMINS---------NCSDTDQAHKKSALLDVFKG------- 771

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY-NLLIG 479
                 ++S G+   +  +NA+I +  R   +  A  LK++M   G  PD  T+ +LL G
Sbjct: 772 ------LISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYG 825

Query: 480 AS 481
            S
Sbjct: 826 FS 827



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 143/345 (41%), Gaps = 36/345 (10%)

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A +  GE+LA D  +  +D  ++ +++      G   +   L    + +      V YNV
Sbjct: 258 ARRLYGEMLARDR-EGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNV 316

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVIT---------------------------- 333
           LI+G+C  GD+        +M  +G +P V+T                            
Sbjct: 317 LIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERG 376

Query: 334 -------YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
                  YNT++  LCK     +A      +  +   PD +++ T+I   C  GD+ +A 
Sbjct: 377 LSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEAL 436

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + L   + + + P    +  +I G+   G++  A  +   M+  G + +V T  ALI   
Sbjct: 437 KLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGL 496

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + +A  ++++M    + PD   YN+LI   C    +  A  L  EML + + PD 
Sbjct: 497 VVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDK 556

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
             YT LI G      + +A ++F  ++  G   D + +  + K Y
Sbjct: 557 FVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGY 601



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 12/236 (5%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I+  C  G +  A+     M + G +PD  T+  L++   K GD++ A   + +M + 
Sbjct: 596 AMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKR 655

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R  PN  TY + I GYC +   D A  LF++M + G+ PN V + +L+ +L KK     A
Sbjct: 656 RCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQA 715

Query: 243 VKFLGEVLAD--DDGKATSDVITSTI------LMDSYFKNGDKFQALALWNDMFQ----K 290
             +   +L +      AT   + + +      +++S   + D+    +   D+F+     
Sbjct: 716 AAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISD 775

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
            +   I AYN +I   C +  +  A     +M  +G LPD +T+ +LL      GK
Sbjct: 776 GLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGK 831



 Score = 39.7 bits (91), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 15/105 (14%)

Query: 151 PDVLTHNYLVNEL--CKIG-------DLEKADH------VIREMSEMRPSPNCATYNAFI 195
           P+  T +YLVN L  C+ G       D ++A        V + +      P  + YNA I
Sbjct: 729 PNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAII 788

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
              CR N L KA+ L   M+N G  P+ VT   L++     G  G
Sbjct: 789 FSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSG 833


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 243/479 (50%), Gaps = 12/479 (2%)

Query: 87  FNALDLILKENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKM 144
           F   D+  ++  + L+ M   G  P   T  T        I  LC  G + +AL   R +
Sbjct: 264 FGEADIDTRQATEILEEMERNGESPTVVTYST-------YIYGLCRVGYVESALDFVRSL 316

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           I    + +V  +N +++ LCK G+L++A  V+ EM     SP+  TY+  I G+C+  ++
Sbjct: 317 ISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDV 376

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           +K L+L   M  + + P+ V+++ L H LCKK L   ++    ++ A        D    
Sbjct: 377 EKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGA---AGYKYDQTAY 433

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           +IL+  +   GD   A  L  +M + N+  D   +  L++GFC  G   +A  +F  ML+
Sbjct: 434 SILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLE 493

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G LP + T N +++  C++G+++EA +    +   G+ P+  +Y  +I  LC      +
Sbjct: 494 GGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSER 553

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A E    ML+++V+P   +++ +IDG+ +  +   A  +   ML  GV+ ++  +  LI 
Sbjct: 554 ALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILIN 613

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
                  + +A++L K+M  +G+ PD  +Y  +I   C +G +  A  L++EML+RG  P
Sbjct: 614 ILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLP 673

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            ++TYT L+ G+C    +  A+ +  +++  G+  D + + +L   +RR    DKA ++
Sbjct: 674 TVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEM 732



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 212/440 (48%), Gaps = 15/440 (3%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIG------DLEKADHVIREMSEMRPSPNCATYNA 193
           L  +M   G  P+V T+  ++N  CK        D  +A  ++ EM     SP   TY+ 
Sbjct: 236 LFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYST 295

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
           +I G CRV  ++ AL    ++ +     N   +N ++H LCKKG L +A+K L E+    
Sbjct: 296 YIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEM---K 352

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
               + DV T +IL+  + K GD  + L L  +M   N++  +V+Y+ L +G C      
Sbjct: 353 SCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSD 412

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            +   F  +   G+  D   Y+ L+   C QG LD A      + +  +APD  ++++++
Sbjct: 413 ISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLV 472

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            G C  G  V A EF   MLE  ++P     NVIID + R G +  A ++ + M + G+ 
Sbjct: 473 HGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIF 532

Query: 434 SNVFTFNALI---LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
            N+FT+NA+I     E +     + F L   ML   + P V  Y+ LI       +   A
Sbjct: 533 PNLFTYNAVINRLCKERKSERALELFPL---MLKRNVLPSVVVYSTLIDGFAKQSNSQKA 589

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L LY  ML+ G+TPD++ YT LI   C R  M EA  +F K+   G+  D I +  +   
Sbjct: 590 LMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAG 649

Query: 551 YRRMKESDKARDIHQKWLLR 570
           + R+ +  KA  +  + L R
Sbjct: 650 FCRIGDMRKAWALFNEMLQR 669



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 198/397 (49%), Gaps = 9/397 (2%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN--ELD----KALHL 210
           N+L+  L +    E    +  EM    P PN  TY   +  YC+ N  E D    +A  +
Sbjct: 218 NFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEI 277

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M  NG  P  VT++  ++ LC+ G +  A+ F+  +++        +V     ++  
Sbjct: 278 LEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLIS---ANGLVNVYCYNAIIHG 334

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K G+  +AL +  +M    I  D+  Y++LI+GFC  GD+        +M      P 
Sbjct: 335 LCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPS 394

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           +++Y++L + LCK+   D +   +  L   G   DQ +Y  +I+G C+ GD+  A + + 
Sbjct: 395 LVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLME 454

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M+  ++ P+P  +  ++ G+ + G   NA    ++ML  G+  ++ T N +I A  R G
Sbjct: 455 EMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREG 514

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A +L  EM   GIFP++FTYN +I   C       AL+L+  ML+R + P ++ Y+
Sbjct: 515 RVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYS 574

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            LI G   + N ++A  ++A++  +G+  D + + IL
Sbjct: 575 TLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTIL 611



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 180/393 (45%), Gaps = 19/393 (4%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            ++  I  +   + L+ A+ +F      G+  +  + N L+  L +     +  +FL  +
Sbjct: 181 VFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAE----ANRREFLRSL 236

Query: 250 LADDDGKATS---DVITSTILMDSYFKNG------DKFQALALWNDMFQKNIQTDIVAYN 300
              ++ K+T    +V T TI+M+ Y K        D  QA  +  +M +      +V Y+
Sbjct: 237 F--EEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYS 294

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
             I G C  G + SA  +   ++    L +V  YN +++ LCK+G+LDEA      +   
Sbjct: 295 TYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSC 354

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY--GRCGDLS 418
           G++PD  +Y  +I G C  GD+ K    +  M   ++ P    ++ +  G    R  D+S
Sbjct: 355 GISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDIS 414

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
                RDL  + G   +   ++ LI      G +  A  L +EM+ + + PD   +  L+
Sbjct: 415 LDI-FRDLGAA-GYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLV 472

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C +G    AL+ ++ ML  GI P I T   +I  HC  G ++EA  +  ++QT G+ 
Sbjct: 473 HGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIF 532

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            +   +  +  R  + ++S++A ++    L RN
Sbjct: 533 PNLFTYNAVINRLCKERKSERALELFPLMLKRN 565



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 125/288 (43%), Gaps = 6/288 (2%)

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K+    ++ +++LI  F  N  + +A   F Q  K G      + N LL CL +  + + 
Sbjct: 173 KDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREF 232

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHG------DIVKAREFLLSMLEKSVVPEPHI 403
               +  +  TG  P+  +Y  ++   C         D  +A E L  M      P    
Sbjct: 233 LRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVT 292

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           ++  I G  R G + +A      ++S     NV+ +NA+I    + G + +A  + +EM 
Sbjct: 293 YSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMK 352

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             GI PDV+TY++LI   C  G +   L L +EM    + P +++Y+ L  G C +    
Sbjct: 353 SCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSD 412

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            + ++F  +   G   D   + IL K +    + D A  + ++ +  N
Sbjct: 413 ISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNN 460



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 72/133 (54%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  LC   ++  A  L +KM + G  PD +++  ++   C+IGD+ KA  + 
Sbjct: 604 DMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALF 663

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM +    P   TY + + GYC++N +D A  L   M   GI P+ VT+N+L+ A  ++
Sbjct: 664 NEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRR 723

Query: 237 GLLGDAVKFLGEV 249
           G L  A++ L E+
Sbjct: 724 GNLDKALEMLNEM 736



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 5/143 (3%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E  +  K M + G     +  D   + +VI   C  G +  A  L  +M+Q+G +P V+T
Sbjct: 623 EAYNLFKKMTENG-----MTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVT 677

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +  LV+  CK+  ++ AD +I EM     +P+  TYN  I  + R   LDKAL + + M 
Sbjct: 678 YTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMK 737

Query: 216 NNGIRPNRVTHNILVHALCKKGL 238
            NG+ P+ +T+ +L   L  K L
Sbjct: 738 ENGVLPDHMTYMMLEWLLKAKKL 760


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 222/435 (51%), Gaps = 3/435 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GKI  A  L  +M  KG +PDV+++  +++  C +G+L+K   +++EM      PN  TY
Sbjct: 124 GKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTY 183

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           ++ I   C+  ++ +   +   M   G+ P+ V +  L+   CK G    A K   E+ A
Sbjct: 184 SSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEA 243

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            +      D I  + L+     +G   +A  L+N+M +K  + D V Y  LI+G+C  G+
Sbjct: 244 RE---IVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGE 300

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  AF    QM++ G  P+V+TY  L + LCK G+LD A+     + + G+  +  +Y T
Sbjct: 301 MKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNT 360

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           I+ GLC  G+I++A + +  M E  + P+   +  ++D Y + G++  A  +   ML  G
Sbjct: 361 IVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRG 420

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +   V TFN L+      G + D   L K ML  GI P+  TYN ++   C   ++ ++ 
Sbjct: 421 LQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRIST 480

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           ++Y  M  +G+ PD  TY  LIKGHC   NMKEA  +  ++      +    +  L K +
Sbjct: 481 EIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGF 540

Query: 552 RRMKESDKARDIHQK 566
            + K+  +AR + ++
Sbjct: 541 FKRKKLLEARQLFEE 555



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 226/447 (50%), Gaps = 12/447 (2%)

Query: 129 CLGGK---IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           CL  K   +G  L +  +  Q G   +  ++N L+N L ++G + +A H++  M      
Sbjct: 83  CLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCI 142

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  +Y   I GYC V EL K + L   M   G++PN  T++ ++  LCK G + +  K 
Sbjct: 143 PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV 202

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L E++         D +  T L+D + K G+   A  L+++M  + I  D +A++ LI G
Sbjct: 203 LREMMKRG---VFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICG 259

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
              +G +  A   F +M+K+GF PD +TY  L++  CK G++ +A   +  + + G+ P+
Sbjct: 260 LSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPN 319

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++Y  +  GLC  G++  A E L  M  K +      +N I++G  + G++  A  + +
Sbjct: 320 VVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLME 379

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   G+  +  T+  L+ A  + G +  A  L +EML  G+ P V T+N+L+   C  G
Sbjct: 380 EMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSG 439

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +    +L   ML +GI P+  TY  ++K +C R NM+ + E++  +   G+  D   + 
Sbjct: 440 KLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYN 499

Query: 546 ILKKRYRRMKESDKARDIHQKWLLRNK 572
           IL      +K   KAR++ + W L  +
Sbjct: 500 IL------IKGHCKARNMKEAWFLHKE 520



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 224/451 (49%), Gaps = 8/451 (1%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLE-----TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           IL  +L RL  +R+   +   +E      D   +  +I   C  G++   + L ++M  K
Sbjct: 115 ILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLK 174

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P++ T++ ++  LCK G + + + V+REM +    P+   Y   I G+C++     A
Sbjct: 175 GLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAA 234

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             LFS M    I P+ +  + L+  L   G + +A K   E++         D +T T L
Sbjct: 235 YKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKG---FEPDEVTYTAL 291

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D Y K G+  +A  L N M Q  +  ++V Y  L +G C +G++ +A     +M ++G 
Sbjct: 292 IDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGL 351

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             ++ TYNT++N LCK G + +A      + + G+ PD I+Y T++      G++VKARE
Sbjct: 352 QLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARE 411

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L  ML++ + P    +NV+++G    G L +   +   ML  G+  N  T+N+++    
Sbjct: 412 LLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYC 471

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
              ++  +  + + M   G+ PD  TYN+LI   C   ++  A  L+ EM+ +       
Sbjct: 472 IRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTAS 531

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
           +Y  LIKG   R  + EA ++F +++  GL 
Sbjct: 532 SYNALIKGFFKRKKLLEARQLFEEMRREGLV 562



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 187/384 (48%), Gaps = 3/384 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D+  +  +I   C  G    A  L  +M  +  VPD +  + L+  L   G + +AD + 
Sbjct: 214 DHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLF 273

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM +    P+  TY A I GYC++ E+ KA  L + M   G+ PN VT+  L   LCK 
Sbjct: 274 NEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKS 333

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A + L E+          ++ T   +++   K G+  QA+ L  +M +  +  D 
Sbjct: 334 GELDTANELLHEMCRKG---LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDT 390

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + Y  L++ +   G++  A     +ML RG  P V+T+N L+N LC  GKL++       
Sbjct: 391 ITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKW 450

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + + G+ P+  +Y +I++  CI  ++  + E    M  + VVP+ + +N++I G+ +  +
Sbjct: 451 MLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARN 510

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A+ +   M+    +    ++NALI    +   + +A  L +EM  +G+      YNL
Sbjct: 511 MKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNL 570

Query: 477 LIGASCNLGHIHLALQLYDEMLRR 500
            +  +   G++   L+L DE + +
Sbjct: 571 FVDMNYEEGNMETTLELCDEAIEK 594



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 182/382 (47%), Gaps = 4/382 (1%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC-KKGLLGDAVKFLGE 248
            ++ F         L++A   F  + N G+  +  + N+ +  L  K+ +LG  +K   E
Sbjct: 41  VFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSE 100

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
                      +  +  ILM+S F+ G   +A  L   M  K    D+V+Y  +I+G+C 
Sbjct: 101 F---PQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCH 157

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G++        +M  +G  P++ TY++++  LCK GK+ E       + K GV PD + 
Sbjct: 158 VGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVI 217

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y T+I G C  G+   A +    M  + +VP+   ++ +I G    G +  A  + + M+
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMI 277

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G   +  T+ ALI    + G +  AF L  +M+  G+ P+V TY  L    C  G + 
Sbjct: 278 KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELD 337

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A +L  EM R+G+  +I TY  ++ G C  GN+ +A ++  +++  GL  D I +  L 
Sbjct: 338 TANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLM 397

Query: 549 KRYRRMKESDKARDIHQKWLLR 570
             Y +  E  KAR++ ++ L R
Sbjct: 398 DAYYKTGEMVKARELLREMLDR 419



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 148/316 (46%), Gaps = 3/316 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++   E D   + A+I   C  G++  A +L  +M+Q G  P+V+T+  L + LCK G+L
Sbjct: 277 IKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGEL 336

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           + A+ ++ EM       N +TYN  + G C+   + +A+ L   M   G+ P+ +T+  L
Sbjct: 337 DTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTL 396

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           + A  K G +  A + L E+L   D      V+T  +LM+    +G       L   M +
Sbjct: 397 MDAYYKTGEMVKARELLREML---DRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLE 453

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K I  +   YN ++  +C+  ++  +   +  M  +G +PD  TYN L+   CK   + E
Sbjct: 454 KGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKE 513

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   +  + +        SY  +I+G      +++AR+    M  + +V    I+N+ +D
Sbjct: 514 AWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVD 573

Query: 410 GYGRCGDLSNAFSIRD 425
                G++     + D
Sbjct: 574 MNYEEGNMETTLELCD 589



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 3/289 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V+  L  +   + A+   LC  G++ TA  L  +M +KG   ++ T+N +VN LCK G++
Sbjct: 312 VQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNI 371

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A  ++ EM E    P+  TY   +  Y +  E+ KA  L   M + G++P  VT N+L
Sbjct: 372 LQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVL 431

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           ++ LC  G L D  + L  +L   +     +  T   +M  Y    +   +  ++  M  
Sbjct: 432 MNGLCMSGKLEDGERLLKWML---EKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCA 488

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           + +  D   YN+LI G C   ++  A+    +M+++ F     +YN L+    K+ KL E
Sbjct: 489 QGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLE 548

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           A   +  + + G+      Y   +      G++    E     +EK ++
Sbjct: 549 ARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKCLL 597



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 36/184 (19%)

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV-----SSNVF----------------- 437
           +PH+++V        G L+ A    D +L++GV     S N++                 
Sbjct: 38  DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKV 97

Query: 438 --------------TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
                         ++N L+ +  R G I +A  L   M   G  PDV +Y  +I   C+
Sbjct: 98  FSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCH 157

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           +G +   +QL  EM  +G+ P++ TY+ +I   C  G + E E+V  ++   G+  DH+ 
Sbjct: 158 VGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVI 217

Query: 544 FRIL 547
           +  L
Sbjct: 218 YTTL 221


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 220/433 (50%), Gaps = 3/433 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D      +I+ L L GK+  A+ L  +M++ G  PDV+T+N +VN +C+ GD   A  
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++R+M E     +  TY+  I   CR   +D A+ LF  M   GI+ + VT+N LV  LC
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K G   D    L ++++ +      +VIT  +L+D + K G   +A  L+ +M  + I  
Sbjct: 275 KAGKWNDGALLLKDMVSRE---IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           +I+ YN L++G+C+   +S A      M++    PD++T+ +L+   C   ++D+    +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +SK G+  + ++Y  ++QG C  G I  A E    M+   V+P+   + +++DG    
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G L  A  I + +    +   +  +  +I    +GG + DA++L   +   G+ P+V TY
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
            ++I   C  G +  A  L  +M   G  P+  TY  LI+ H   G++  + ++  ++++
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571

Query: 535 LGLAIDHIPFRIL 547
            G + D    +++
Sbjct: 572 CGFSADASSIKMV 584



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 192/384 (50%), Gaps = 5/384 (1%)

Query: 166 IGDLEKADHV--IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           I D++K D +   +EM   RP P+   ++ F +   R  + +  L     +  NGI  N 
Sbjct: 64  IVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI 123

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
            T NI+++  C+      A   LG+V+         D  T   L+   F  G   +A+ L
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLG---YEPDTTTFNTLIKGLFLEGKVSEAVVL 180

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            + M +   Q D+V YN ++NG C +GD S A     +M +R    DV TY+T+++ LC+
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G +D A   +  +   G+    ++Y ++++GLC  G        L  M+ + +VP    
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +NV++D + + G L  A  +   M++ G+S N+ T+N L+        + +A ++   M+
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
            +   PD+ T+  LI   C +  +   ++++  + +RG+  + +TY+ L++G C  G +K
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420

Query: 524 EAEEVFAKIQTLGLAIDHIPFRIL 547
            AEE+F ++ + G+  D + + IL
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGIL 444



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 186/381 (48%), Gaps = 8/381 (2%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           LD L+ M +       ++ D   +  +I  LC  G I  A+ L ++M  KG    V+T+N
Sbjct: 213 LDLLRKMEERN-----VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            LV  LCK G       ++++M      PN  T+N  +  + +  +L +A  L+  M   
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           GI PN +T+N L+   C +  L +A   L  ++ +   K + D++T T L+  Y      
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN---KCSPDIVTFTSLIKGYCMVKRV 384

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
              + ++ ++ ++ +  + V Y++L+ GFC +G I  A   F +M+  G LPDV+TY  L
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           L+ LC  GKL++A   +  L K+ +    + Y TII+G+C  G +  A     S+  K V
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P    + V+I G  + G LS A  +   M   G + N  T+N LI A  R G +  +  
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564

Query: 458 LKKEMLLDGIFPDVFTYNLLI 478
           L +EM   G   D  +  ++I
Sbjct: 565 LIEEMKSCGFSADASSIKMVI 585



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 194/397 (48%), Gaps = 3/397 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L ++MI+   +P ++  +   + + +           +++     + N  T N  I 
Sbjct: 72  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            +CR  +   A  +   +   G  P+  T N L+  L  +G + +AV  +  ++   +  
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV---ENG 188

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              DV+T   +++   ++GD   AL L   M ++N++ D+  Y+ +I+  C +G I +A 
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           + F +M  +G    V+TYN+L+  LCK GK ++ +     +    + P+ I++  ++   
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
              G + +A E    M+ + + P    +N ++DGY     LS A ++ DLM+    S ++
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            TF +LI        + D   + + +   G+  +  TY++L+   C  G I LA +L+ E
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           M+  G+ PD++TY  L+ G C  G +++A E+F  +Q
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 149/284 (52%), Gaps = 4/284 (1%)

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           I  +I   N++IN FC       A++   +++K G+ PD  T+NTL+  L  +GK+ EA 
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                + + G  PD ++Y +I+ G+C  GD   A + L  M E++V  +   ++ IID  
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            R G +  A S+   M + G+ S+V T+N+L+    + G   D   L K+M+   I P+V
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            T+N+L+      G +  A +LY EM+ RGI+P+IITY  L+ G+C +  + EA  +   
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRN 571
           +     + D + F  L K Y  +K  D      R+I ++ L+ N
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 402



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 145/299 (48%), Gaps = 7/299 (2%)

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
           K  A+AL+ +M +      +V ++   +        +    +  Q+   G   ++ T N 
Sbjct: 69  KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           ++NC C+  K   A    G + K G  PD  ++ T+I+GL + G + +A   +  M+E  
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P+   +N I++G  R GD S A  +   M    V ++VFT++ +I +  R G I  A 
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
           SL KEM   GI   V TYN L+   C  G  +    L  +M+ R I P++IT+  L+   
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARDIHQKWLLRNK 572
              G ++EA E++ ++ T G++ + I +  L   Y    R+ E++   D+    ++RNK
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL----MVRNK 363



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 130/280 (46%), Gaps = 38/280 (13%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A  L ++MI +G  P+++T+N L++  C    L +A++++  M   + SP+  T+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
            + I GYC V  +D  + +F  ++  G+  N VT++ILV   C+ G +  A +   E+++
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ---------------------- 289
                   DV+T  IL+D    NG   +AL ++ D+ +                      
Sbjct: 432 HG---VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488

Query: 290 -------------KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
                        K ++ +++ Y V+I+G C  G +S A     +M + G  P+  TYNT
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           L+    + G L  ++     +   G + D  S K +I  L
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 59/113 (52%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  +C GGK+  A  L   +  KG  P+V+T+  +++ LCK G L +A+ ++R+M 
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           E   +PN  TYN  I  + R  +L  +  L   M + G   +  +  +++  L
Sbjct: 536 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 234/431 (54%), Gaps = 3/431 (0%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           +A+ L  +M   G   +V + N L+N LC++  ++ A  V+ +M ++   P+  T+N  I
Sbjct: 114 SAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLI 173

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   ++ +A+ LF+ M  +G  PN +++N +++ LCK G    AV+   ++   +  
Sbjct: 174 NGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKM---EQN 230

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           +   +V+T   ++DS  K+    +A+   ++M  + I  D+V YN +++GFC  G ++ A
Sbjct: 231 RGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEA 290

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F +M+ R  +PD +T+N L++ LCK+G + EA      +++ G  P+  +Y  ++ G
Sbjct: 291 TRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDG 350

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C+H  + +A + L  M+ K   P    +N++I+GY +   ++ A  +   M    ++ +
Sbjct: 351 YCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPD 410

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             T++ L+    + G   +A +L KEM   G+ PD+  Y++L+   C  GH+  AL+L  
Sbjct: 411 TVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLK 470

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
           EM  R I P+II YT LI+G    G ++ A+E+F+K+   G+  D   + ++ K   +  
Sbjct: 471 EMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEG 530

Query: 556 ESDKARDIHQK 566
            SD+A +  +K
Sbjct: 531 LSDEAYEFFRK 541



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 221/438 (50%), Gaps = 3/438 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC    +  A+ +  KM + G  PD +T N L+N LC  G +++A  +  EM   
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  +YN  I G C+      A+ +F  M  N  +PN VT+N ++ +LCK  L+ +A
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V+FL E++   D     DV+T   ++  +   G   +A  L+ +M  +N+  D V +N+L
Sbjct: 256 VEFLSEMV---DRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNIL 312

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G C  G +S A      M ++G  P+  TYN L++  C   ++DEA    G++   G 
Sbjct: 313 VDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGC 372

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           AP+  SY  +I G C    + +A+  L  M EK++ P+   ++ ++ G  + G    A +
Sbjct: 373 APNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALN 432

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M S G+  ++  ++ L+    + G + +A  L KEM    I P++  Y +LI    
Sbjct: 433 LFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMF 492

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G + +A +L+ ++   GI PDI TY  +IKG    G   EA E F K++  G   D  
Sbjct: 493 IAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSC 552

Query: 543 PFRILKKRYRRMKESDKA 560
            + ++ + + + ++S  A
Sbjct: 553 SYNVIIQGFLQNQDSSTA 570



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 212/425 (49%), Gaps = 3/425 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC  GKI  A+ L  +M+  G  P+V+++N ++N LCK G+   A  V R+M + 
Sbjct: 171 TLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQN 230

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R  PN  TYN  I   C+   +++A+   S M + GI P+ VT+N ++H  C  G L +A
Sbjct: 231 RGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEA 290

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +   E++  +      D +T  IL+D   K G   +A  +   M +K  + +   YN L
Sbjct: 291 TRLFKEMVGRN---VMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNAL 347

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+CL+  +  A      M+ +G  P++ +YN L+N  CK  +++EA      +S+  +
Sbjct: 348 MDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNL 407

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y T++QGLC  G   +A      M    ++P+   +++++DG+ + G L  A  
Sbjct: 408 TPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALK 467

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M    +  N+  +  LI      G +  A  L  ++  DGI PD++TYN++I    
Sbjct: 468 LLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLL 527

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G    A + + +M   G  PD  +Y  +I+G     +   A ++  ++     + D  
Sbjct: 528 KEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSS 587

Query: 543 PFRIL 547
            F++L
Sbjct: 588 TFQML 592



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 208/399 (52%), Gaps = 3/399 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E +   +  VI  LC  G    A+ + RKM Q    P+V+T+N +++ LCK   + +A  
Sbjct: 198 EPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVE 257

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
            + EM +    P+  TYN  + G+C + +L++A  LF  M    + P+ VT NILV  LC
Sbjct: 258 FLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLC 317

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G++ +A + + E + +    A  +  T   LMD Y  +    +A+ +   M  K    
Sbjct: 318 KEGMVSEA-RCVSETMTEKG--AEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAP 374

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++ +YN+LING+C +  ++ A     +M ++   PD +TY+TL+  LC+ G+  EA + +
Sbjct: 375 NLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLF 434

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +  +G+ PD ++Y  ++ G C HG + +A + L  M E+ + P   ++ ++I G    
Sbjct: 435 KEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIA 494

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G L  A  +   + + G+  +++T+N +I    + G   +A+   ++M  DG  PD  +Y
Sbjct: 495 GKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSY 554

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           N++I           A+QL DEM+ +  + D  T+  L+
Sbjct: 555 NVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 192/380 (50%), Gaps = 15/380 (3%)

Query: 75  KDSDNEGNPQAV-FNAL------DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRD 127
           K   N G P  V +N +      D ++ E ++ L  M D G     +  D   +  ++  
Sbjct: 226 KMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRG-----IPPDVVTYNTILHG 280

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
            C  G++  A  L ++M+ +  +PD +T N LV+ LCK G + +A  V   M+E    PN
Sbjct: 281 FCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPN 340

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TYNA + GYC  N++D+A+ +   M   G  PN  ++NIL++  CK   + +A + L 
Sbjct: 341 AYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLS 400

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E+    +   T D +T + LM    + G   +AL L+ +M    +  D++AY++L++GFC
Sbjct: 401 EM---SEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFC 457

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            +G +  A     +M +R   P++I Y  L+  +   GKL+ A   +  LS  G+ PD  
Sbjct: 458 KHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIW 517

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y  +I+GL   G   +A EF   M +   +P+   +NVII G+ +  D S A  + D M
Sbjct: 518 TYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEM 577

Query: 428 LSFGVSSNVFTFNALILAET 447
           +    S++  TF  L+  E+
Sbjct: 578 VGKRFSADSSTFQMLLDLES 597



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 131/281 (46%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           AL  +  M + N +  +V +   +         SSA +   QM   G   +V + N L+N
Sbjct: 80  ALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLIN 139

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           CLC+   +D A    G + K G+ PD I++ T+I GLC  G I +A      M+     P
Sbjct: 140 CLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEP 199

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +N +I+G  + G+   A  +   M       NV T+N +I +  +   + +A    
Sbjct: 200 NVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFL 259

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            EM+  GI PDV TYN ++   C+LG ++ A +L+ EM+ R + PD +T+  L+ G C  
Sbjct: 260 SEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKE 319

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G + EA  V   +   G   +   +  L   Y    + D+A
Sbjct: 320 GMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEA 360


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 127/412 (30%), Positives = 212/412 (51%), Gaps = 3/412 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G++   L L  ++  KG  PD   +N ++  LCK G++ +A+ ++R M +    P+ 
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDN 347

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             Y   I+G+C++  +  A  LF  M    I P+ VT+  ++H +CK G + +A +   E
Sbjct: 348 VVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNE 407

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +L         D +T T L+D Y K G+  +A ++ N M QK +  ++V Y  L +G C 
Sbjct: 408 MLVKG---LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           NG+I  A     +M ++G  P+V TYNT++N LCK G +++       +   G  PD I+
Sbjct: 465 NGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTIT 524

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y T++   C  G++ KA E L  ML K + P    +NV+++G+   G L +   + + ML
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWML 584

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G+  N  TFN+L+       ++     + K M   G+ PD  TYN+LI   C   ++ 
Sbjct: 585 EKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMK 644

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            A  L+ EM+ +G +    TY  LI+G   R    EA ++F +++  GL  +
Sbjct: 645 EAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAE 696



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 229/443 (51%), Gaps = 3/443 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC  GK+  A  L  +M  +G  PDV+++  +V+  C+IG+L+K   ++ E+    
Sbjct: 248 VLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKG 307

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   YN  I   C+  E+ +A  L   M   G+ P+ V +  ++   CK G +  A 
Sbjct: 308 LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAAC 367

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K   E+      K   D++T T ++    K+G   +A  ++N+M  K ++ D V Y  LI
Sbjct: 368 KLFDEM---RRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALI 424

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+C  G++  AF+   QM+++G  P+V+TY  L + LCK G++D A+     +S+ G+ 
Sbjct: 425 DGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQ 484

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+  +Y TI+ GLC  G+I +  + +  M      P+   +  ++D Y + G+++ A  +
Sbjct: 485 PNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHEL 544

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
             +ML+  +   + TFN L+      G + D   L + ML  GI P+  T+N L+   C 
Sbjct: 545 LRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCI 604

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
             ++    ++Y  M  RG+ PD  TY  LIKGHC   NMKEA  +  ++   G ++    
Sbjct: 605 KNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAAT 664

Query: 544 FRILKKRYRRMKESDKARDIHQK 566
           +  L + + + K+  +AR + ++
Sbjct: 665 YDALIRGFYKRKKFVEARKLFEE 687



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 184/388 (47%), Gaps = 38/388 (9%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  +  D   + +VI  +C  GK+  A  +  +M+ KG  PD +T+  L++  CK G+++
Sbjct: 375 RKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMK 434

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  V  +M +   +PN  TY A   G C+  E+D A  L   M+  G++PN  T+N +V
Sbjct: 435 EAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIV 494

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           + LCK G +   VK + E+   D      D IT T LMD+Y K G+  +A  L   M  K
Sbjct: 495 NGLCKIGNIEQTVKLMEEM---DLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNK 551

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            +Q  +V +NVL+NGFC++G +         ML++G +P+  T+N+L+   C +  +   
Sbjct: 552 RLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRAT 611

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
           +  Y  +   GV PD  +Y  +I+G C      KAR                        
Sbjct: 612 TEIYKAMHDRGVMPDSNTYNILIKGHC------KAR------------------------ 641

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
                ++  A+ +   M+  G S    T++ALI    +     +A  L +EM   G+  +
Sbjct: 642 -----NMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAE 696

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEML 498
              Y++ +  +   G+  + L+L DE +
Sbjct: 697 KDIYDIFVDVNYEEGNWEITLELCDEFM 724



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 167/365 (45%), Gaps = 38/365 (10%)

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           C    +  A+ +F      G+  N V+ NI++H LC+ G + +A   L  V   D G   
Sbjct: 218 CNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLL--VQMTDRGNFP 275

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
                                               D+V+Y V+++G+C  G++      
Sbjct: 276 ------------------------------------DVVSYGVVVSGYCRIGELDKVLKL 299

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             ++  +G  PD   YN ++  LCK G++ EA      + K GV PD + Y T+I G C 
Sbjct: 300 VDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCK 359

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G++  A +    M  K +VP+   +  +I G  + G +  A  + + ML  G+  +  T
Sbjct: 360 LGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVT 419

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           + ALI    + G + +AFS+  +M+  G+ P+V TY  L    C  G I +A +L  EM 
Sbjct: 420 YTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMS 479

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
           R+G+ P++ TY  ++ G C  GN+++  ++  ++   G   D I +  L   Y +M E  
Sbjct: 480 RKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMA 539

Query: 559 KARDI 563
           KA ++
Sbjct: 540 KAHEL 544



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 180/361 (49%), Gaps = 13/361 (3%)

Query: 185 SPNCATYNAFITGYCRVNELD--KALHLFSTM-----ANNGIRPNRVTHNILVHALCKKG 237
           S +  T    +  +C   ++D  K+ HLF+ M      + G  P  +  ++    L + G
Sbjct: 128 SNDIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHP--LVFDLYFQVLVENG 185

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ-ALALWNDMFQKNIQTDI 296
            + +A K   ++L    G   S V +  + +     N +  + A+ ++ +  +  +  + 
Sbjct: 186 FVLEAQKLFHKLLRY--GVVVS-VDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNT 242

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V+ N++++  C  G +  A     QM  RG  PDV++Y  +++  C+ G+LD+       
Sbjct: 243 VSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDE 302

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           L   G+ PD+  Y  II  LC +G++V+A + L  M +  V P+  ++  +I G+ + G+
Sbjct: 303 LKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGN 362

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +S A  + D M    +  ++ T+ ++I    + G + +A  +  EML+ G+ PD  TY  
Sbjct: 363 VSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTA 422

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C  G +  A  ++++M+++G+TP+++TYT L  G C  G +  A E+  ++   G
Sbjct: 423 LIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKG 482

Query: 537 L 537
           L
Sbjct: 483 L 483



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 129/259 (49%), Gaps = 1/259 (0%)

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL-CKQGKLDEASHFYGVLSKTGVAPDQI 367
           NG +  A   F ++L+ G +  V + N  L+ L C    +  A   +    + GV  + +
Sbjct: 184 NGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTV 243

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           S   ++  LC  G + +A   L+ M ++   P+   + V++ GY R G+L     + D +
Sbjct: 244 SCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDEL 303

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              G+  + + +N +IL   + G + +A  L + M   G+FPD   Y  +I   C LG++
Sbjct: 304 KGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNV 363

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A +L+DEM R+ I PDI+TYT +I G C  G M EA E+F ++   GL  D + +  L
Sbjct: 364 SAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTAL 423

Query: 548 KKRYRRMKESDKARDIHQK 566
              Y +  E  +A  +H +
Sbjct: 424 IDGYCKAGEMKEAFSVHNQ 442


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 215/426 (50%), Gaps = 3/426 (0%)

Query: 90  LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
           L L LK N  ++  +      R  + +       +I  LC  GK+  A      M   G 
Sbjct: 188 LSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGV 247

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P+V+T+N +++  C  G  ++A  + + M +    P+C TYN+FI+G C+   L++A  
Sbjct: 248 KPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASG 307

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L   M   G+ PN VT+N L+   C KG L  A  +  E+++       + ++T  + + 
Sbjct: 308 LICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKG---IMASLVTYNLFIH 364

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
           + F  G    A  +  +M +K +  D V +N+LING+C  GD   AF    +M+ +G  P
Sbjct: 365 ALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQP 424

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
            ++TY +L+  L K+ ++ EA   +  + + G+ PD I +  +I G C +G+I +A + L
Sbjct: 425 TLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLL 484

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M    V+P+   +N ++ GY R G +  A  + D M   G+  +  ++N LI   ++ 
Sbjct: 485 KEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKR 544

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + DAF ++ EM+  G  P + TYN LI   C       A +L  EM+ +GITPD  TY
Sbjct: 545 GDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTY 604

Query: 510 TELIKG 515
             +I+ 
Sbjct: 605 LSIIEA 610



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 217/442 (49%), Gaps = 9/442 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C    I   L L R  +   T    L  + LV   C++    +A      + E  
Sbjct: 120 ILSPTCTNRTIFDELALARDRVDAKTT---LIFDLLVRAYCELKKPNEALECFYLIKEKG 176

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T N  ++ + ++N    A  L++ M    IR +  T NI+++ LCK+G L  A 
Sbjct: 177 FVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAK 236

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +F+G +   +      +V+T   ++  +   G   +A  ++  M  K ++ D   YN  I
Sbjct: 237 EFIGHM---ETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFI 293

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G +  A    C+ML+ G +P+ +TYN L++  C +G LD+A  +   +   G+ 
Sbjct: 294 SGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIM 353

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
              ++Y   I  L + G +  A   +  M EK ++P+    N++I+GY RCGD   AF +
Sbjct: 354 ASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGL 413

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M+  G+   + T+ +LI    +   + +A +L  ++  +G+ PD+  +N LI   C 
Sbjct: 414 LDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCA 473

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G+I  A QL  EM    + PD ITY  L++G+C  G ++EA ++  +++  G+  DHI 
Sbjct: 474 NGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHIS 533

Query: 544 FRILKKRYRR---MKESDKARD 562
           +  L   Y +   MK++ + RD
Sbjct: 534 YNTLISGYSKRGDMKDAFRVRD 555



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 200/404 (49%), Gaps = 3/404 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A  L  +M +      + T N ++N LCK G L+KA   I  M  +   PN  TYN  I 
Sbjct: 200 AWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIH 259

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G+C   +  +A  +F TM + G+ P+  T+N  +  LCK+G L +A   + ++L   +G 
Sbjct: 260 GHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKML---EGG 316

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              + +T   L+D Y   GD  +A A  ++M  K I   +V YN+ I+   + G +  A 
Sbjct: 317 LVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDAD 376

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M ++G +PD +T+N L+N  C+ G    A      +   G+ P  ++Y ++I  L
Sbjct: 377 NMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVL 436

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
                + +A      + ++ ++P+  ++N +IDG+   G++  AF +   M +  V  + 
Sbjct: 437 GKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDE 496

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+N L+    R G + +A  L  EM   GI PD  +YN LI      G +  A ++ DE
Sbjct: 497 ITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDE 556

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           M+  G  P I+TY  LI+G C     + AEE+  ++ + G+  D
Sbjct: 557 MMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPD 600



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 222/466 (47%), Gaps = 8/466 (1%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
            D L   RD    + TL  D      ++R  C   K   AL     + +KG VP++ T N
Sbjct: 131 FDELALARDRVDAKTTLIFDL-----LVRAYCELKKPNEALECFYLIKEKGFVPNIETCN 185

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            +++   K+   + A  +  EM  M    +  T+N  I   C+  +L KA      M   
Sbjct: 186 QMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETL 245

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G++PN VT+N ++H  C +G    A + + + + D       D  T    +    K G  
Sbjct: 246 GVKPNVVTYNTIIHGHCLRGKFQRA-RVIFQTMKDKG--LEPDCYTYNSFISGLCKEGRL 302

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +A  L   M +  +  + V YN LI+G+C  GD+  A+AY  +M+ +G +  ++TYN  
Sbjct: 303 EEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLF 362

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           ++ L  +G++ +A +    + + G+ PD +++  +I G C  GD  +A   L  M+ K +
Sbjct: 363 IHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGI 422

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P    +  +I   G+   +  A ++   +   G+  ++  FNALI      G+I  AF 
Sbjct: 423 QPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQ 482

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L KEM    + PD  TYN L+   C  G +  A QL DEM RRGI PD I+Y  LI G+ 
Sbjct: 483 LLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYS 542

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            RG+MK+A  V  ++ T G     + +  L +   + +E + A ++
Sbjct: 543 KRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEEL 588



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 162/353 (45%), Gaps = 43/353 (12%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
            +TM+D G     LE D   + + I  LC  G++  A  L  KM++ G VP+ +T+N L+
Sbjct: 274 FQTMKDKG-----LEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328

Query: 161 NELCKIGDLEKA-----------------------------------DHVIREMSEMRPS 185
           +  C  GDL+KA                                   D++I+EM E    
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMM 388

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  T+N  I GYCR  +  +A  L   M   GI+P  VT+  L++ L K+  + +A   
Sbjct: 389 PDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADAL 448

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             ++  +       D+I    L+D +  NG+  +A  L  +M    +  D + YN L+ G
Sbjct: 449 FSKIQQEG---LLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQG 505

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           +C  G +  A     +M +RG  PD I+YNTL++   K+G + +A      +  TG  P 
Sbjct: 506 YCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPT 565

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
            ++Y  +IQGLC + +   A E L  M+ K + P+   +  II+      DL 
Sbjct: 566 ILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618



 Score = 45.4 bits (106), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 3/113 (2%)

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            + F L KE    G  P++ T N ++     L    +A  LY EM R  I   + T+  +
Sbjct: 166 LECFYLIKE---KGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIM 222

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           I   C  G +K+A+E    ++TLG+  + + +  +   +    +  +AR I Q
Sbjct: 223 INVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQ 275


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 212/392 (54%), Gaps = 5/392 (1%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           ++M++    P+V T+N L+   C  G+++ A  +  +M      PN  TYN  I GYC++
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS-D 260
            ++D    L  +MA  G+ PN +++N++++ LC++G + + V F   VL + + +  S D
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE-VSF---VLTEMNRRGYSLD 309

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
            +T   L+  Y K G+  QAL +  +M +  +   ++ Y  LI+  C  G+++ A  +  
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           QM  RG  P+  TY TL++   ++G ++EA      ++  G +P  ++Y  +I G C+ G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            +  A   L  M EK + P+   ++ ++ G+ R  D+  A  ++  M+  G+  +  T++
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           +LI          +A  L +EML  G+ PD FTY  LI A C  G +  ALQL++EM+ +
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           G+ PD++TY+ LI G   +   +EA+ +  K+
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 213/417 (51%), Gaps = 4/417 (0%)

Query: 148 GTVPDVLTHNYLVNELCKIG-DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           G +P VL++N +++   +   ++  A++V +EM E + SPN  TYN  I G+C    +D 
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           AL LF  M   G  PN VT+N L+   CK   + D  K L  +          ++I+  +
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG---LEPNLISYNV 280

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +++   + G   +   +  +M ++    D V YN LI G+C  G+   A     +ML+ G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P VITY +L++ +CK G ++ A  F   +   G+ P++ +Y T++ G    G + +A 
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             L  M +    P    +N +I+G+   G + +A ++ + M   G+S +V +++ ++   
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            R   + +A  +K+EM+  GI PD  TY+ LI   C       A  LY+EMLR G+ PD 
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            TYT LI  +C  G++++A ++  ++   G+  D + + +L     +   + +A+ +
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 218/460 (47%), Gaps = 18/460 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR  C  G I  AL L  KM  KG +P+V+T+N L++  CK+  ++    ++R M+   
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  +YN  I G CR   + +   + + M   G   + VT+N L+   CK+G    A+
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+L       T  VIT T L+ S  K G+  +A+   + M  + +  +   Y  L+
Sbjct: 331 VMHAEMLRHG---LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GF   G ++ A+    +M   GF P V+TYN L+N  C  GK+++A      + + G++
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +SY T++ G C   D+ +A      M+EK + P+   ++ +I G+        A  +
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + ML  G+  + FT+ ALI A    G +  A  L  EM+  G+ PDV TY++LI     
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567

Query: 484 LGHIHLALQLYDEMLRRGITPDIITY---------------TELIKGHCARGNMKEAEEV 528
                 A +L  ++      P  +TY                 LIKG C +G M EA++V
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           F  +       D   + I+   + R  +  KA  ++++ +
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 214/442 (48%), Gaps = 18/442 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C   KI     L R M  KG  P+++++N ++N LC+ G +++   V+ EM+  
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             S +  TYN  I GYC+     +AL + + M  +G+ P+ +T+  L+H++CK G +  A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++FL ++          +  T T L+D + + G   +A  +  +M        +V YN L
Sbjct: 365 MEFLDQMRVRG---LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING C+ G +  A A    M ++G  PDV++Y+T+L+  C+   +DEA      + + G+
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD I+Y ++IQG C      +A +    ML   + P+   +  +I+ Y   GDL  A  
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M+  GV  +V T++ LI    +     +A  L  ++  +   P   TY+ LI    
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601

Query: 483 NL---------------GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           N+               G +  A Q+++ ML +   PD   Y  +I GHC  G++++A  
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661

Query: 528 VFAKIQTLGLAIDHIPFRILKK 549
           ++ ++   G  +  +    L K
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVK 683



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 215/435 (49%), Gaps = 20/435 (4%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE +   +  VI  LC  G++    ++  +M ++G   D +T+N L+   CK G+  +A 
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM     +P+  TY + I   C+   +++A+     M   G+ PN  T+  LV   
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            +KG + +A + L E+  +D+G + S V+T   L++ +   G    A+A+  DM +K + 
Sbjct: 391 SQKGYMNEAYRVLREM--NDNGFSPS-VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+V+Y+ +++GFC + D+  A     +M+++G  PD ITY++L+   C+Q +  EA   
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  + + G+ PD+ +Y  +I   C+ GD+ KA +    M+EK V+P+   ++V+I+G  +
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567

Query: 414 CGDLSNAFS-IRDLMLSFGVSSNVFTFNALI-----------LAETRG----GSIFDAFS 457
                 A   +  L     V S+V T++ LI           ++  +G    G + +A  
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDV-TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           + + ML     PD   YN++I   C  G I  A  LY EM++ G     +T   L+K   
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALH 686

Query: 518 ARGNMKEAEEVFAKI 532
             G + E   V   +
Sbjct: 687 KEGKVNELNSVIVHV 701



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 205/416 (49%), Gaps = 39/416 (9%)

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK-KGLLGDAVKFLG 247
           + ++  +  Y R++ +DKAL +      +G  P  +++N ++ A  + K  +  A     
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E+L   + + + +V T  IL+  +   G+   AL L++ M  K    ++V YN LI+G+C
Sbjct: 195 EML---ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
               I   F     M  +G  P++I+YN ++N LC++G++ E S     +++ G + D++
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311

Query: 368 SYKTIIQGLC------------------------------IH-----GDIVKAREFLLSM 392
           +Y T+I+G C                              IH     G++ +A EFL  M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
             + + P    +  ++DG+ + G ++ A+ +   M   G S +V T+NALI      G +
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            DA ++ ++M   G+ PDV +Y+ ++   C    +  AL++  EM+ +GI PD ITY+ L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           I+G C +   KEA +++ ++  +GL  D   +  L   Y    + +KA  +H + +
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 198/403 (49%), Gaps = 18/403 (4%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I  +C  G +  A+    +M  +G  P+  T+  LV+   + G + +A  V+REM+
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   SP+  TYNA I G+C   +++ A+ +   M   G+ P+ V+++ ++   C+   + 
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A++   E++   +     D IT + L+  + +     +A  L+ +M +  +  D   Y 
Sbjct: 468 EALRVKREMV---EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LIN +C+ GD+  A     +M+++G LPDV+TY+ L+N L KQ +  EA      L   
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584

Query: 361 GVAPDQISYKTIIQ---------------GLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
              P  ++Y T+I+               G C+ G + +A +   SML K+  P+   +N
Sbjct: 585 ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYN 644

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
           ++I G+ R GD+  A+++   M+  G   +  T  AL+ A  + G + +  S+   +L  
Sbjct: 645 IMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRS 704

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
               +     +L+  +   G++ + L +  EM + G  P+ I+
Sbjct: 705 CELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 147/294 (50%), Gaps = 28/294 (9%)

Query: 77  SDNEGNPQAV-FNAL------DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLC 129
           +DN  +P  V +NAL         +++ +  L+ M++ G     L  D   +  V+   C
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG-----LSPDVVSYSTVLSGFC 461

Query: 130 LGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCA 189
               +  AL ++R+M++KG  PD +T++ L+   C+    ++A  +  EM  +   P+  
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           TY A I  YC   +L+KAL L + M   G+ P+ VT+++L++ L K+    +A + L ++
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581

Query: 250 LADDDGKATSDVITSTI--------------LMDSYFKNGDKFQALALWNDMFQKNIQTD 295
             ++     SDV   T+              L+  +   G   +A  ++  M  KN + D
Sbjct: 582 FYEES--VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             AYN++I+G C  GDI  A+  + +M+K GFL   +T   L+  L K+GK++E
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 223/450 (49%), Gaps = 11/450 (2%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           K  LD + TM         L+ D+  + A+I        IG A  ++ +M  +    +  
Sbjct: 322 KSMLDEMYTM--------GLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTF 373

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  L++ LCKIGDLEKA+ +  EM+ M   P+  TYN  I GY +V  ++KA  L   +
Sbjct: 374 TYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEI 433

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
               +  N      +V+ LC  G L  A +   E+++        +++  T ++    K 
Sbjct: 434 KKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMIS---WGLKPNIVIYTTIVKGLVKE 490

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +A+ +   M  + +  D+  YN +I GFC  G +    +Y  +M+ +G  P+V TY
Sbjct: 491 GRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTY 550

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
              ++  C+ G++  A   +  +  +G+AP+ +    +I G C  G+  KA      ML+
Sbjct: 551 GAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLD 610

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           + V+P+    +V+I G  + G L  A  +   +L  G+  +VFT+ +LI    + G +  
Sbjct: 611 QGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKA 670

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           AF L  +M   GI P++ TYN LI   C LG I  A +L+D +  +G+  + +TY+ +I 
Sbjct: 671 AFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIA 730

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G+C   N+ EA ++F  ++ +G+  D   +
Sbjct: 731 GYCKSANLTEAFQLFHGMKLVGVPPDSFVY 760



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 220/466 (47%), Gaps = 38/466 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  VI  LC  G +  AL L+R M  KG +PD   +  L++  C+     +   ++ EM 
Sbjct: 270 YSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMY 329

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            M   P+   Y A I G+ + +++  A  +   M    I+ N  T+  L+H LCK G L 
Sbjct: 330 TMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLE 389

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A     E+          D+ T   L++ Y+K  +  +A  L  ++ ++N+  +     
Sbjct: 390 KAEDLFSEMTMMG---IKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCG 446

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            ++NG C  GD++ A   F +M+  G  P+++ Y T++  L K+G+ +EA    GV+   
Sbjct: 447 AIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQ 506

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL--- 417
           G++PD   Y T+I G C  G + + + +L+ M+ K + P  + +   I GY R G++   
Sbjct: 507 GLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAA 566

Query: 418 --------------------------------SNAFSIRDLMLSFGVSSNVFTFNALILA 445
                                           + AF+    ML  GV  +V T + LI  
Sbjct: 567 ERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHG 626

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
            ++ G + +A  +  E+L  G+ PDVFTY  LI   C  G +  A +L+D+M ++GI P+
Sbjct: 627 LSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPN 686

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           I+TY  LI G C  G + +A E+F  I   GLA + + +  +   Y
Sbjct: 687 IVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGY 732



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 225/502 (44%), Gaps = 44/502 (8%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
            +E +  L  M+D G     L  D   +  VI   C  GK+        +MI KG  P+V
Sbjct: 493 FEEAIKILGVMKDQG-----LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNV 547

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+   ++  C+ G+++ A+    EM +   +PN       I GYC+     KA   F  
Sbjct: 548 YTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRC 607

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M + G+ P+  TH++L+H L K G L +A+    E+L   D     DV T T L+ +  K
Sbjct: 608 MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELL---DKGLVPDVFTYTSLISNLCK 664

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            GD   A  L +DM +K I  +IV YN LING C  G+I+ A   F  + ++G   + +T
Sbjct: 665 EGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVT 724

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y+T++   CK   L EA   +  +   GV PD   Y  +I G C  G+  KA    L M+
Sbjct: 725 YSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMV 784

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML------------------------- 428
           E+ +   P  +N +IDG+ + G L  A+ + + M+                         
Sbjct: 785 EEGIASTPA-FNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIK 843

Query: 429 ----------SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
                        V  NV T+ +L+    R G   + FSL  EM+  GI PD   +++++
Sbjct: 844 EAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMV 903

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            A    G+   AL+L D+ML  G+      YT LI   C   N+ E  +V  +++  G  
Sbjct: 904 DAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSK 963

Query: 539 IDHIPFRILKKRYRRMKESDKA 560
           +       L   + R   +D+A
Sbjct: 964 LSLATCGTLVCCFHRAGRTDEA 985



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 184/357 (51%), Gaps = 3/357 (0%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  TY   I  YCRV ++++  H+   M   G  PN VT+++++  LC+ G + +A++ 
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALE- 288

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L   +A+  G    + I +T L+D + +     +  ++ ++M+   ++ D VAY  LING
Sbjct: 289 LKRSMANK-GLLPDNYIYAT-LIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALING 346

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           F    DI  AF    +M  R    +  TY  L++ LCK G L++A   +  ++  G+ PD
Sbjct: 347 FVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPD 406

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
             +Y  +I+G     ++ KA E L+ + ++++    ++   I++G   CGDL+ A  +  
Sbjct: 407 IQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQ 466

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M+S+G+  N+  +  ++    + G   +A  +   M   G+ PDVF YN +I   C  G
Sbjct: 467 EMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAG 526

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            +        EM+ +G+ P++ TY   I G+C  G M+ AE  F ++   G+A + +
Sbjct: 527 KMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDV 583



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 197/409 (48%), Gaps = 4/409 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G    A    R M+ +G +PDV TH+ L++ L K G L++A  V  E+ +  
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY + I+  C+  +L  A  L   M   GI PN VT+N L++ LCK G +  A 
Sbjct: 648 LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAR 707

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +    +   + G A + V  STI+   Y K+ +  +A  L++ M    +  D   Y  LI
Sbjct: 708 ELFDGI--PEKGLARNSVTYSTIIA-GYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALI 764

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G+   A + F  M++ G +     +N L++   K GKL EA      +    + 
Sbjct: 765 DGCCKAGNTEKALSLFLGMVEEG-IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHIT 823

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y  +I+  C  G+I +A +  + M +++V+P    +  ++ GY R G  S  FS+
Sbjct: 824 PNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSL 883

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M++ G+  +   ++ ++ A  + G+   A  L  +ML +G+      Y +LI A C 
Sbjct: 884 FDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCK 943

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
             ++   L++ DE+ ++G    + T   L+      G   EA  V   +
Sbjct: 944 HNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 180/371 (48%), Gaps = 11/371 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L+E +     + D G V      D   + ++I +LC  G +  A  L   M +KG  P++
Sbjct: 633 LQEAMGVFSELLDKGLV-----PDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNI 687

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N L+N LCK+G++ KA  +   + E   + N  TY+  I GYC+   L +A  LF  
Sbjct: 688 VTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHG 747

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVK-FLGEVLADDDGKATSDVITSTILMDSYF 272
           M   G+ P+   +  L+   CK G    A+  FLG V   ++G A++    +  L+D +F
Sbjct: 748 MKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMV---EEGIASTPAFNA--LIDGFF 802

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G   +A  L  DM   +I  + V Y +LI   C  G+I  A   F +M KR  +P+V+
Sbjct: 803 KLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVL 862

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TY +LL+   + G+  E    +  +   G+ PD +++  ++      G+ +KA + +  M
Sbjct: 863 TYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDM 922

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           L + V    +++ ++ID   +  +LS    + D +   G   ++ T   L+    R G  
Sbjct: 923 LSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRT 982

Query: 453 FDAFSLKKEML 463
            +A  + + M+
Sbjct: 983 DEALRVLESMV 993



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 190/402 (47%), Gaps = 10/402 (2%)

Query: 103 TMRDTGPVRCTLET----DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           T +     RC L+     D + H  +I  L   GK+  A+ +  +++ KG VPDV T+  
Sbjct: 598 TTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTS 657

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           L++ LCK GDL+ A  +  +M +   +PN  TYNA I G C++ E+ KA  LF  +   G
Sbjct: 658 LISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKG 717

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVK-FLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           +  N VT++ ++   CK   L +A + F G  L         D      L+D   K G+ 
Sbjct: 718 LARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVG----VPPDSFVYCALIDGCCKAGNT 773

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +AL+L+  M ++ I +   A+N LI+GF   G +  A+     M+     P+ +TY  L
Sbjct: 774 EKALSLFLGMVEEGIAS-TPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTIL 832

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +   C  G + EA   +  + K  V P+ ++Y +++ G    G   +       M+ + +
Sbjct: 833 IEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGI 892

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P+   W+V++D + + G+   A  + D MLS GV+     +  LI A  +  ++ +   
Sbjct: 893 KPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLK 952

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           +  E+   G    + T   L+      G    AL++ + M+R
Sbjct: 953 VLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVR 994



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 146/310 (47%)

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           ++L K  L G+ V+   +V     G    DV T T L+++Y + G   +   +  DM +K
Sbjct: 202 NSLSKDLLKGNRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEK 261

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
               ++V Y+V+I G C  GD+  A      M  +G LPD   Y TL++  C+Q +  E 
Sbjct: 262 GCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEG 321

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                 +   G+ PD ++Y  +I G     DI  A +    M  + +      +  +I G
Sbjct: 322 KSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHG 381

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             + GDL  A  +   M   G+  ++ T+N LI    +  ++  A+ L  E+  + +  +
Sbjct: 382 LCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTAN 441

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
            +    ++   C+ G +  A +L+ EM+  G+ P+I+ YT ++KG    G  +EA ++  
Sbjct: 442 AYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILG 501

Query: 531 KIQTLGLAID 540
            ++  GL+ D
Sbjct: 502 VMKDQGLSPD 511



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 96/428 (22%), Positives = 180/428 (42%), Gaps = 41/428 (9%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           TH+   N      D  ++D+ ++E++ +    N   +   I      N+L+  +      
Sbjct: 24  THSIKSNSFSTNADTNQSDNTVKEITSLLKQKN---WQFLIESSPLPNKLNPDVVFLVIK 80

Query: 215 ANNGIRPNRV------------------THNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            N  I P R+                  T +IL   LC  GL G+A   L  ++   +  
Sbjct: 81  QNQVIDPKRLHGFFNWVNSRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRNPH 140

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
                     ++DS  K          + ++   +  + +V + +LI+ +   G ++ A 
Sbjct: 141 VK--------ILDSIIK---------CYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAV 183

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY-GVLSKTGVAPDQISYKTIIQG 375
           + F       F+  +   N+L   L K  +++     Y G+L    + PD  +Y  +I  
Sbjct: 184 SVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLG--AIVPDVYTYTNLINA 241

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C  G + + +  L  M EK  +P    ++V+I G  R GD+  A  ++  M + G+  +
Sbjct: 242 YCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPD 301

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
            + +  LI    R     +  S+  EM   G+ PD   Y  LI        I  A Q+ +
Sbjct: 302 NYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKE 361

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
           EM  R I  +  TY  LI G C  G++++AE++F+++  +G+  D   +  L + Y +++
Sbjct: 362 EMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQ 421

Query: 556 ESDKARDI 563
             +KA ++
Sbjct: 422 NMEKAYEL 429


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 131/434 (30%), Positives = 226/434 (52%), Gaps = 4/434 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L + MI  G +PD+  +N L+  LC+   +E+A  ++ +M E    PN  TY AFI 
Sbjct: 505 AIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFIN 564

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            Y +  E+  A   F  M ++GI PN V + IL+   C    +G+ V+ L       +  
Sbjct: 565 LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCD---VGNTVEALSTFKCMLEKG 621

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D+   + ++ S  KNG   +A+ ++    +  +  D+  YN LI+GFC  GDI  A 
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             + +ML  G  P+++ YNTL+N LCK G++ +A   +  + +  + PD ++Y TII G 
Sbjct: 682 QLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGY 741

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G++ +A +    M+ K + P+ +I+ ++IDG G+ G+L  A S+        V S +
Sbjct: 742 CKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGS-L 800

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
             FN+LI +  + G + +A  L  +M+   + P++ TY +LI A      +  A QL+ +
Sbjct: 801 SAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLD 860

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M  R I P+ +TYT L+  +   GN  +   +F  ++  G+A D I + ++   Y +  +
Sbjct: 861 METRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGK 920

Query: 557 SDKARDIHQKWLLR 570
           S +A  +  K L+ 
Sbjct: 921 SLEALKLLNKSLVE 934



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 216/445 (48%), Gaps = 4/445 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++RDL     +G    +   M++   VPDV T+  ++   CK+GD+ K   V+ EM E  
Sbjct: 213 LMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKE 271

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYNAFI G C+   +D+AL +   M   G+ P+  T+ +LV   CK+    +A 
Sbjct: 272 CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEA- 330

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K + E +         +  T T L+D + K G+  +AL + ++M  + ++ ++V YN +I
Sbjct: 331 KLIFESMPSSG--LNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G    G+++ A + F +ML  G  PD  TYN L++   K   + +A      +    + 
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLT 448

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P   +Y  +I GLC   D+ KA E L  M+   V P   ++  +I  Y +      A  +
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
             +M++ GV  ++F +N LI+   R   + +A  L  +M   GI P+  TY   I     
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G I +A + + +ML  GI P+ + YT LIKGHC  GN  EA   F  +   GL  D   
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 544 FRILKKRYRRMKESDKARDIHQKWL 568
           +  +     +  ++ +A  +  K+L
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFL 653



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 215/464 (46%), Gaps = 38/464 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A I  LC  G +  AL +++ M++KG  PD  T+  LV+  CK    ++A  +   M   
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +PN  TY A I G+ +   +++AL +   M   G++ N VT+N ++  + K G +  A
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E+L         D  T  +L+D Y K+ D  +A  L  +M  + +      Y+VL
Sbjct: 401 MSLFNEMLM---AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVL 457

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C + D+  A     QM++ G  P+V  Y TL+    ++ + + A     ++   GV
Sbjct: 458 ISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGV 517

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH-------------------- 402
            PD   Y  +I GLC    + +A+  L+ M EK + P  H                    
Sbjct: 518 LPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAER 577

Query: 403 ---------------IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
                          I+ ++I G+   G+   A S    ML  G+  ++  ++A+I + +
Sbjct: 578 YFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLS 637

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G   +A  +  + L  G+ PDVF YN LI   C  G I  A QLYDEML  GI P+I+
Sbjct: 638 KNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIV 697

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            Y  LI G C  G + +A E+F +I+   L  D + +  +   Y
Sbjct: 698 VYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGY 741



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 214/427 (50%), Gaps = 3/427 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I      G I  AL ++ +MI +G   +V+T+N ++  + K G++ KA  +  EM 
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML 408

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  TYN  I GY + +++ KA  L + M    + P+  T+++L+  LC    L 
Sbjct: 409 MAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A + L +++ +       +V     L+ +Y +      A+ L   M    +  D+  YN
Sbjct: 469 KANEVLDQMIRNG---VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYN 525

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI G C    +  A      M ++G  P+  TY   +N   K G++  A  ++  +  +
Sbjct: 526 CLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSS 585

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+ + Y  +I+G C  G+ V+A      MLEK ++P+   ++ II    + G    A
Sbjct: 586 GIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEA 645

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +    L  GV  +VF +N+LI    + G I  A  L  EML +GI P++  YN LI  
Sbjct: 646 MGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLING 705

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C LG +  A +L+DE+  + + PD++TY+ +I G+C  GN+ EA ++F ++ + G++ D
Sbjct: 706 LCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPD 765

Query: 541 HIPFRIL 547
              + IL
Sbjct: 766 GYIYCIL 772



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 231/474 (48%), Gaps = 7/474 (1%)

Query: 63  QCRSKTRHWFSNKDSDNEGNP-QAVFNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYR 119
           Q RSK           +  NP +  + AL D  +KE N++    ++D    R  L+ +  
Sbjct: 324 QKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITR-GLKLNVV 382

Query: 120 RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
            + A+I  +   G++  A+ L  +M+  G  PD  T+N L++   K  D+ KA  ++ EM
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
              + +P+  TY+  I+G C  ++L KA  +   M  NG++PN   +  L+ A  ++   
Sbjct: 443 KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRY 502

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
             A++ L  ++A+       D+     L+    +     +A  L  DM +K I+ +   Y
Sbjct: 503 EMAIELLKIMIANG---VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
              IN +  +G+I  A  YF  ML  G +P+ + Y  L+   C  G   EA   +  + +
Sbjct: 560 GAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLE 619

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ PD  +Y  II  L  +G   +A    L  L+  VVP+  ++N +I G+ + GD+  
Sbjct: 620 KGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEK 679

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  + D ML  G++ N+  +N LI    + G +  A  L  E+    + PDV TY+ +I 
Sbjct: 680 ASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIID 739

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
             C  G++  A +L+DEM+ +GI+PD   Y  LI G    GN+++A  +F + Q
Sbjct: 740 GYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQ 793



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 204/449 (45%), Gaps = 43/449 (9%)

Query: 92   LILKENLDRLKTMRDTGPVRCTLE----TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
            +++K + D   T+      +C LE     D R + A+I  L   GK   A+ +  K ++ 
Sbjct: 596  ILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKT 655

Query: 148  GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
            G VPDV  +N L++  CK GD+EKA  +  EM     +PN   YN  I G C++ E+ KA
Sbjct: 656  GVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKA 715

Query: 208  LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
              LF  +    + P+ VT++ ++   CK G L +A K   E+++      + D     IL
Sbjct: 716  RELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKG---ISPDGYIYCIL 772

Query: 268  MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
            +D   K G+  +AL+L+++  QK++ + + A+N LI+ FC +G +  A   F  M+ +  
Sbjct: 773  IDGCGKEGNLEKALSLFHEAQQKSVGS-LSAFNSLIDSFCKHGKVIEARELFDDMVDKKL 831

Query: 328  LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             P+++TY  L++   K   ++EA   +                                 
Sbjct: 832  TPNIVTYTILIDAYGKAEMMEEAEQLF--------------------------------- 858

Query: 388  FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
              L M  ++++P    +  ++  Y + G+     S+   M + G++ +   +  +  A  
Sbjct: 859  --LDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYC 916

Query: 448  RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
            + G   +A  L  + L++GI  +   ++ LI   C    I   L+L  EM +  ++    
Sbjct: 917  KEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSK 976

Query: 508  TYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            T   L+ G    GN  EA +V   +Q LG
Sbjct: 977  TCNTLLLGFYKSGNEDEASKVLGVMQRLG 1005



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 203/441 (46%), Gaps = 26/441 (5%)

Query: 139 WLRRKMIQKGTVPDVL-THNYLVNELCKIGDLEKADHVIREMSEMRPSP----------- 186
           W   KM    + P  L +++ L   LC  G + +AD+++ ++ + R  P           
Sbjct: 109 WSSSKM----STPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCY 164

Query: 187 ------NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                 N   ++ FI  +  +  L++A  +F    + G  P  +  N L+  L K  ++G
Sbjct: 165 REFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMG 224

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
              K  G ++   + K   DV T T ++ ++ K GD  +   + ++M +K  + ++  YN
Sbjct: 225 LFWKVYGSMV---EAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYN 280

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
             I G C  G +  A      M+++G  PD  TY  L++  CKQ +  EA   +  +  +
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P++ +Y  +I G    G+I +A      M+ + +      +N +I G  + G+++ A
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
            S+ + ML  G+  + +T+N LI    +   +  A  L  EM    + P  FTY++LI  
Sbjct: 401 MSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C+   +  A ++ D+M+R G+ P++  Y  LIK +      + A E+   +   G+  D
Sbjct: 461 LCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520

Query: 541 HIPFRILKKRYRRMKESDKAR 561
              +  L     R K+ ++A+
Sbjct: 521 LFCYNCLIIGLCRAKKVEEAK 541



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 36/276 (13%)

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
           +++  +++ I+ F + G ++ A + F   +  GF P +I  N L+  L K   +      
Sbjct: 170 SNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKV 229

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           YG + +  + PD  +Y  +I+  C  GD++K +  +LS +EK   P              
Sbjct: 230 YGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGK-MVLSEMEKECKP-------------- 274

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
                                N+FT+NA I    + G++ +A  +KK M+  G+ PD  T
Sbjct: 275 ---------------------NLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHT 313

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y LL+   C       A  +++ M   G+ P+  TYT LI G    GN++EA  +  ++ 
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMI 373

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
           T GL ++ + +  +     +  E  KA  +  + L+
Sbjct: 374 TRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 99/246 (40%), Gaps = 38/246 (15%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++I   C  GK+  A  L   M+ K   P+++T+  L++   K   +E+A+ +  +M   
Sbjct: 805  SLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETR 864

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               PN  TY + +  Y ++    K + LF  M   GI  + + + ++  A CK+G   +A
Sbjct: 865  NIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEA 924

Query: 243  VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +K L + L                            + + L +D+F           + L
Sbjct: 925  LKLLNKSLV---------------------------EGIKLEDDVF-----------DAL 946

Query: 303  INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            I   C    IS+      +M K        T NTLL    K G  DEAS   GV+ + G 
Sbjct: 947  IFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGW 1006

Query: 363  APDQIS 368
             P  +S
Sbjct: 1007 VPTSLS 1012


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 215/437 (49%), Gaps = 4/437 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC  G++ +AL   R M Q+   P V+T+  LV+ LCK   +  A  ++ +M E  
Sbjct: 208 IIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAG 266

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN  TYN  I G+C++  +D+A+ LF+ M  N   P+  T+NIL+   CK+    D  
Sbjct: 267 CAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGA 326

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L E++         + IT   LMDS  K+G    A  L   M +++ +     +N++I
Sbjct: 327 KLLQEMVK---YGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMI 383

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           + FC  G +  A+  F  M  RG LPD+ TYN +++  C+  ++D+A      +++ G  
Sbjct: 384 DMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCP 443

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y +I+ GLC    + +A E    +       +    + +IDG  +   L +A  +
Sbjct: 444 PDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKL 503

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G + +V  +  LI    +   +  + +   EML  G  P V TY+++I   C 
Sbjct: 504 LREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 563

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              +     L   ML RG+TPD I YT +I G C   +  EA E++  ++  G A   + 
Sbjct: 564 SARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVT 623

Query: 544 FRILKKRYRRMKESDKA 560
           + +L  +  ++   D+A
Sbjct: 624 YNVLVDKLCKVSRLDEA 640



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 212/480 (44%), Gaps = 32/480 (6%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++  LC   +I  A  +   MI+ G  P+V+T+N L+N  CK+G++++A  +  +M 
Sbjct: 239 YTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQML 298

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   SP+  TYN  I GYC+         L   M   G  PN +T+N L+ +L K G   
Sbjct: 299 ENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYI 358

Query: 241 DAVKFLGEVLADD--------------------------------DGKATSDVITSTILM 268
           DA      +L  D                                D     D+ T  I++
Sbjct: 359 DAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMI 418

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
               +      A  L   M +     D+V YN +++G C    +  A+  +  +   G+ 
Sbjct: 419 SGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYF 478

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
            DV+T +TL++ LCK  +LD+A      + + G APD ++Y  +I G C    + K+  F
Sbjct: 479 LDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAF 538

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              ML+K  VP    ++++ID   +   + +   +   ML  GV+ +   + ++I    +
Sbjct: 539 FSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCK 598

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
             S  +A+ L K M   G  P V TYN+L+   C +  +  A+ L + M   G  PD +T
Sbjct: 599 SDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVT 658

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           Y  +  G        +A  +F  +++ G +     + +L  +    ++ D+A +I ++ L
Sbjct: 659 YNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEAL 718



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 181/376 (48%), Gaps = 4/376 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           SP+  TY+  I G+C+  +  +A  L   M   GI P+   +N ++  LC  G +  A+ 
Sbjct: 164 SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 223

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
                  D        VIT TIL+D+  K+     A  +  DM +     ++V YN LIN
Sbjct: 224 HY----RDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLIN 279

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           GFC  G++  A   F QML+    PDV TYN L++  CKQ +  + +     + K G  P
Sbjct: 280 GFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEP 339

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           + I+Y T++  L   G  + A      ML +   P    +N++ID + + G L  A+ + 
Sbjct: 340 NFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELF 399

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
            LM   G   +++T+N +I    R   I DA  L + M   G  PDV TYN ++   C  
Sbjct: 400 QLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKA 459

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
             +  A ++Y+ +   G   D++T + LI G C    + +AE++  +++  G A D + +
Sbjct: 460 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAY 519

Query: 545 RILKKRYRRMKESDKA 560
            IL   + +  + DK+
Sbjct: 520 TILIHGFCKADQLDKS 535



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 197/397 (49%), Gaps = 4/397 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD +T++ L+N  CK  D ++A  ++ EM +    P+ A YN  I G C    +D AL  
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 224

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           +  M  N   P+ +T+ ILV ALCK   + DA   L +++   +     +V+T   L++ 
Sbjct: 225 YRDMQRN-CAPSVITYTILVDALCKSARISDASLILEDMI---EAGCAPNVVTYNTLING 280

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + K G+  +A+ L+N M + +   D+  YN+LI+G+C             +M+K G  P+
Sbjct: 281 FCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 340

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            ITYNTL++ L K GK  +A +   ++ +    P   ++  +I   C  G +  A E   
Sbjct: 341 FITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ 400

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M ++  +P+ + +N++I G  R   + +A  + + M   G   +V T+N+++    +  
Sbjct: 401 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKAS 460

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A+ + + +   G F DV T + LI   C    +  A +L  EM R G  PD++ YT
Sbjct: 461 QVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYT 520

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            LI G C    + ++   F+++   G     I + I+
Sbjct: 521 ILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIV 557



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 187/373 (50%), Gaps = 7/373 (1%)

Query: 200 RVNELDKALHLFS-TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           ++++LDKA+  F       G + ++ T N L+ A  +K    +A            G  +
Sbjct: 108 QLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRC---GLCS 164

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            D IT + L++ + K  D  QA  L ++M ++ I      YN +I G C NG + SA  +
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 224

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           +  M +R   P VITY  L++ LCK  ++ +AS     + + G AP+ ++Y T+I G C 
Sbjct: 225 YRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 283

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G++ +A      MLE S  P+   +N++IDGY +     +   +   M+ +G   N  T
Sbjct: 284 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 343

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N L+ +  + G   DAF+L + ML     P  FT+NL+I   C +G + LA +L+  M 
Sbjct: 344 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT 403

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
            RG  PDI TY  +I G C    + +A ++  ++   G   D + +  +     +  + D
Sbjct: 404 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 463

Query: 559 KARDIHQKWLLRN 571
           +A ++++  +LRN
Sbjct: 464 EAYEVYE--VLRN 474



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 195/399 (48%), Gaps = 5/399 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V+   E ++  +  ++  L   GK   A  L + M+++   P   T N +++  CK+G L
Sbjct: 333 VKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQL 392

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           + A  + + M++    P+  TYN  I+G CR N +D A  L   M   G  P+ VT+N +
Sbjct: 393 DLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSI 452

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           V  LCK   + +A +   EVL   +G    DV+T + L+D   K+     A  L  +M +
Sbjct: 453 VSGLCKASQVDEAYEVY-EVLR--NGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 509

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
                D+VAY +LI+GFC    +  + A+F +ML +G +P VITY+ +++ LCK  ++ +
Sbjct: 510 NGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRD 569

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
                  + + GV PD I Y ++I GLC      +A E    M +    P    +NV++D
Sbjct: 570 GCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVD 629

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
              +   L  A  + ++M S G   +  T+N++     +      AF L + M   G  P
Sbjct: 630 KLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSP 689

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRG--ITPDI 506
             F Y+LL+        +  A+++++E L  G  + P+I
Sbjct: 690 TPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEI 728


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 232/483 (48%), Gaps = 40/483 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKG--TVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           +++ LC   +   AL L + M   G    PDV+++  ++N   K GDL+KA     EM +
Sbjct: 168 LLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLD 227

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               PN  TYN+ I   C+   +DKA+ + ++M  NG+ PN  T+N +VH  C  G   +
Sbjct: 228 RGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+ FL ++ +D       DV+T   LMD   KNG   +A  +++ M ++ ++ +I  Y  
Sbjct: 288 AIGFLKKMHSDG---VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 302 LINGFCL-----------------------------------NGDISSAFAYFCQMLKRG 326
           L+ G+                                      G +  A   F +M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PD +TY T++  LCK G++++A  ++  +    ++P  I Y ++I  LCI     KA+
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E +L ML++ +  +   +N IID + + G +  +  + DLM+  GV  N+ T++ LI   
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGY 524

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + +A  L   M+  G+ PD  TYN LI   C +  +  AL L+ EM   G++PDI
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDI 584

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           ITY  +++G         A+E++  I   G  ++   + I+     +   +D+A  + Q 
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644

Query: 567 WLL 569
             L
Sbjct: 645 LCL 647



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 202/418 (48%), Gaps = 5/418 (1%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P++ T+  L+   C  G L+     +  + +     +   +   + G C       A+ 
Sbjct: 88  TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147

Query: 210 L-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           +    M   G  PN  ++NIL+  LC +    +A++ L +++ DD G    DV++ T ++
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL-QMMPDDGGDCPPDVVSYTTVI 206

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           + +FK GD  +A   +++M  + I  ++V YN +I   C    +  A      M+K G +
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+  TYN++++  C  G+  EA  F   +   GV PD ++Y +++  LC +G   +AR+ 
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
             SM ++ + PE   +  ++ GY   G L     + DLM+  G+  N + F+ LI A  +
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +  A  +  +M   G+ PD  TY  +IG  C  G +  A++ +++M+   ++P  I 
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARDI 563
           Y  LI   C      +A+E+  ++   G+ +D I F  +   +    R+ ES+K  D+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/518 (24%), Positives = 222/518 (42%), Gaps = 105/518 (20%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L+ L+ M D G        D   +  VI      G +  A     +M+ +G +P+V+
Sbjct: 179 QEALELLQMMPDDGG---DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVV 235

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+N ++  LCK   ++KA  V+  M +    PNC TYN+ + GYC   +  +A+     M
Sbjct: 236 TYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD------------DGKATSDVI 262
            ++G+ P+ VT+N L+  LCK G   +A K    +                 G AT   +
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 263 TS--------------------TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                 +IL+ +Y K G   QA+ +++ M Q+ +  D V Y  +
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 303 INGFCLNGDISSAFAYFCQM-----------------------------------LKRGF 327
           I   C +G +  A  YF QM                                   L RG 
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             D I +N++++  CK+G++ E+   + ++ + GV P+ I+Y T+I G C+ G + +A +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATK 535

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--LA 445
            L SM+   + P+   +N +I+GY +   + +A  +   M S GVS ++ T+N ++  L 
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595

Query: 446 ETR--------------GGSIFD-------------------AFSLKKEMLLDGIFPDVF 472
           +TR               G+  +                   A  + + + L  +  +  
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           T+N++IGA   +G    A  L+  +   G+ PD+ TY+
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/474 (23%), Positives = 201/474 (42%), Gaps = 67/474 (14%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R + +++   C  G+   A+   +KM   G  PDV+T+N L++ LCK G   +A  +   
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 179 MSEMRPSPNCATYNAFITGYC-----------------------------------RVNE 203
           M++    P   TY   + GY                                    +  +
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD---------- 253
           +D+A+ +FS M   G+ P+ VT+  ++  LCK G + DA+++  +++ +           
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 254 ----------------------DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
                                 D     D I    ++DS+ K G   ++  L++ M +  
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           ++ +I+ Y+ LI+G+CL G +  A      M+  G  PD +TYNTL+N  CK  ++++A 
Sbjct: 510 VKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
             +  +  +GV+PD I+Y  I+QGL        A+E  + + E     E   +N+I+ G 
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +      A  +   +    +     TFN +I A  + G   +A  L   +  +G+ PDV
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 689

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            TY+L+       G +     L+  M   G T +      +++    RG++  A
Sbjct: 690 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 143/329 (43%), Gaps = 41/329 (12%)

Query: 280 ALALWNDMFQK---NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF--------- 327
           A++ +N M +     +  ++  Y +LI   C  G +   FA    ++K+GF         
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 328 ---------------------------LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
                                      +P+V +YN LL  LC + +  EA     ++   
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 361 G--VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           G    PD +SY T+I G    GD+ KA      ML++ ++P    +N II    +   + 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMD 251

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   M+  GV  N  T+N+++      G   +A    K+M  DG+ PDV TYN L+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G    A +++D M +RG+ P+I TY  L++G+  +G + E   +   +   G+ 
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKW 567
            +H  F IL   Y +  + D+A  +  K 
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKM 400



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 141/287 (49%), Gaps = 3/287 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G++  +  L   M++ G  P+++T++ L++  C  G +++A  ++  M  +
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+C TYN  I GYC+++ ++ AL LF  M ++G+ P+ +T+NI++  L +      A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +     +   +     ++ T  I++    KN    +AL ++ ++   ++Q +   +N++
Sbjct: 604 KEL---YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I      G    A   F  +   G +PDV TY+ +   L +QG L+E    +  + + G 
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
             +     +I++ L   GDI +A  +L  + EK    E    ++ +D
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 158/352 (44%), Gaps = 8/352 (2%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MR  G     L  D   +  VI  LC  G++  A+    +MI +   P  + +N L++ L
Sbjct: 400 MRQQG-----LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           C     +KA  +I EM +     +   +N+ I  +C+   + ++  LF  M   G++PN 
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNI 514

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           +T++ L+   C  G + +A K L  +++        D +T   L++ Y K      AL L
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVG---MKPDCVTYNTLINGYCKISRMEDALVL 571

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           + +M    +  DI+ YN+++ G       ++A   +  + + G   ++ TYN +L+ LCK
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
               DEA   +  L  T +  +  ++  +I  L   G   +A++   ++    +VP+   
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
           ++++ +     G L     +   M   G ++N    N+++    + G I  A
Sbjct: 692 YSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 5/151 (3%)

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML---LDGIFPDVFTYN 475
           +A  + D +L  G  ++++  N   LA+    S   A S    M     D + P++ TY 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNC-ALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE-VFAKIQT 534
           +LIG+ C  G + L       ++++G   D I +T L+KG CA     +A + V  ++  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           LG   +   + IL K       S +A ++ Q
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQ 186


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 226/475 (47%), Gaps = 39/475 (8%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I +LC   +      L ++M +    P+ +T+N L++   + G +E A  V  EMS    
Sbjct: 252 IDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNL 311

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            PN  TYN  I G+C    + +AL L   M ++G+RPN VT+  L++ L K    G    
Sbjct: 312 LPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSS 371

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L  +     G      I+ T ++D   KNG   +A+ L +DM + ++  D+V ++VLIN
Sbjct: 372 ILERMRM---GGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLIN 428

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           GF   G I++A    C+M K G +P+ I Y+TL+   CK G L EA + Y V++ +G   
Sbjct: 429 GFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVA 488

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D  +   ++   C +G + +A  F+  M    + P    ++ II+GYG  GD   AFS+ 
Sbjct: 489 DHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVF 548

Query: 425 DLMLSFGVSSNVFT-----------------------------------FNALILAETRG 449
           D M SFG   ++FT                                   FN  + +  R 
Sbjct: 549 DKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRS 608

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG-ITPDIIT 508
           G++ DA +L  EM+ +   PD FTY  LI   C  G I  AL L  + + +G ++P+   
Sbjct: 609 GNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAV 668

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           YT L+ G    G+ + A  +F ++    +  D + F ++  +Y R  ++ K  DI
Sbjct: 669 YTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDI 723



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 188/402 (46%), Gaps = 7/402 (1%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           + M+ KG  PDV T N L+N LC+ G  + A  ++R+M E    P   TYN  +  YC+ 
Sbjct: 164 KGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKK 223

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
                A  L   MA+ GI  +  T+N+ +  LC+          L  +  +       + 
Sbjct: 224 GRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRN---MVYPNE 280

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           IT   L+  + + G    A  ++++M   N+  + + YN LI G C  G+I  A      
Sbjct: 281 ITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDV 340

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M+  G  P+ +TY  LLN L K  +    S     +   GV    ISY  +I GLC +G 
Sbjct: 341 MVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGM 400

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + +A + L  ML+ SV P+   ++V+I+G+ R G ++NA  I   M   G+  N   ++ 
Sbjct: 401 LEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYST 460

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI    + G + +A +    M   G   D FT N+L+   C  G +  A    + M R G
Sbjct: 461 LIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMG 520

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           + P+ +T+  +I G+   G+  +A  VF K+ + G    H P
Sbjct: 521 LDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFG----HFP 558



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 198/421 (47%), Gaps = 3/421 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  GK   A +L RKM + G  P  +T+N L+N  CK G  + A  +I  M+   
Sbjct: 181 LLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKG 240

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TYN FI   CR +   K   L   M  N + PN +T+N L+    ++G +  A 
Sbjct: 241 IGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVAT 300

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K   E+   +      + IT   L+  +   G+  +AL L + M    ++ + V Y  L+
Sbjct: 301 KVFDEMSLFN---LLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALL 357

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG   N +     +   +M   G     I+Y  +++ LCK G L+EA      + K  V 
Sbjct: 358 NGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVN 417

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +++  +I G    G I  A+E +  M +  +VP   +++ +I  Y + G L  A + 
Sbjct: 418 PDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNA 477

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
             +M   G  ++ FT N L+    R G + +A      M   G+ P+  T++ +I    N
Sbjct: 478 YAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGN 537

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G    A  ++D+M   G  P + TY  L+KG C  G++ EA + F +++ +  A+D++ 
Sbjct: 538 SGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVI 597

Query: 544 F 544
           F
Sbjct: 598 F 598



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 212/466 (45%), Gaps = 13/466 (2%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+ MR  G VR +    +  + A+I  LC  G +  A+ L   M++    PDV+T + L+
Sbjct: 373 LERMR-MGGVRVS----HISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLI 427

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           N   ++G +  A  ++ +M +    PN   Y+  I  YC++  L +AL+ ++ M ++G  
Sbjct: 428 NGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHV 487

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEV--LADDDGKATSDVITSTILMDSYFKNGDKF 278
            +  T N+LV   C+ G L +A  F+  +  +  D    T D I     ++ Y  +GD  
Sbjct: 488 ADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCI-----INGYGNSGDAL 542

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A ++++ M        +  Y  L+ G C+ G I+ A  +F ++       D + +NT L
Sbjct: 543 KAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKL 602

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
              C+ G L +A      +      PD  +Y  +I GLC  G IV A       +EK ++
Sbjct: 603 TSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLL 662

Query: 399 -PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P P ++  ++DG  + G    A  I + ML+  V  +   FN +I   +R G       
Sbjct: 663 SPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVND 722

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           +   M    +  ++ TYN+L+        +     LY +M+R G  PD  ++  LI G+C
Sbjct: 723 ILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYC 782

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
              +   A ++   I   G  ID   F +L  ++    E  KA ++
Sbjct: 783 QSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFEL 828



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 185/377 (49%), Gaps = 6/377 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           +P+  T N  +    +  ++D     F  M   GI P+  T NIL++ALC++G   +A  
Sbjct: 137 NPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGF 196

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L ++   ++       +T   L++ Y K G    A  L + M  K I  D+  YNV I+
Sbjct: 197 LLRKM---EESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFID 253

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
             C +   +  +    +M +    P+ ITYNTL++   ++GK++ A+  +  +S   + P
Sbjct: 254 NLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLP 313

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           + I+Y T+I G C  G+I +A   +  M+   + P    +  +++G  +  +     SI 
Sbjct: 314 NSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSIL 373

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           + M   GV  +  ++ A+I    + G + +A  L  +ML   + PDV T+++LI     +
Sbjct: 374 ERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRV 433

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G I+ A ++  +M + G+ P+ I Y+ LI  +C  G +KEA   +A +   G   DH   
Sbjct: 434 GKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTC 493

Query: 545 RILKK---RYRRMKESD 558
            +L     RY +++E++
Sbjct: 494 NVLVATFCRYGKLEEAE 510



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 209/476 (43%), Gaps = 39/476 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I + C  G +  AL     M   G V D  T N LV   C+ G LE+A++ +  MS
Sbjct: 458 YSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMS 517

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            M   PN  T++  I GY    +  KA  +F  M + G  P+  T+  L+  LC  G + 
Sbjct: 518 RMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHIN 577

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+KF   +    +  A  +VI +T L  S  ++G+   A+AL N+M   +   D   Y 
Sbjct: 578 EALKFFHRLRCIPN--AVDNVIFNTKL-TSTCRSGNLSDAIALINEMVTNDFLPDNFTYT 634

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFL-PDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
            LI G C  G I +A     + +++G L P+   Y +L++ L K G    A + +  +  
Sbjct: 635 NLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLN 694

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG------R 413
             V PD +++  II      G   K  + L +M  K++      +N+++ GY       R
Sbjct: 695 KDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMAR 754

Query: 414 C----------GDLSNAFSIRDLML------SFGVSSNV-------------FTFNALIL 444
           C          G L + FS   L+L      SF V+  +             FTFN LI 
Sbjct: 755 CFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLIT 814

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
                  +  AF L K+M    + P+V TYN L          H A ++   +L  G  P
Sbjct: 815 KFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVP 874

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
               Y  LI G C  GN+K A ++  +++TLG++  ++    + +     K+ + A
Sbjct: 875 TNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENA 930



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 193/440 (43%), Gaps = 4/440 (0%)

Query: 128 LCLGGK-IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           +CL  + +G A+     M  +G  P V T N ++  L K   ++      + M      P
Sbjct: 114 VCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICP 173

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           + AT+N  +   C   +   A  L   M  +G+ P  VT+N L++  CKKG    A + +
Sbjct: 174 DVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLI 233

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
             + +   G    DV T  + +D+  ++    +   L   M +  +  + + YN LI+GF
Sbjct: 234 DCMASKGIG---VDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGF 290

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
              G I  A   F +M     LP+ ITYNTL+   C  G + EA     V+   G+ P++
Sbjct: 291 VREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNE 350

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           ++Y  ++ GL  + +       L  M    V      +  +IDG  + G L  A  + D 
Sbjct: 351 VTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDD 410

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           ML   V+ +V TF+ LI    R G I +A  +  +M   G+ P+   Y+ LI   C +G+
Sbjct: 411 MLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGY 470

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  AL  Y  M   G   D  T   L+   C  G ++EAE     +  +GL  + + F  
Sbjct: 471 LKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDC 530

Query: 547 LKKRYRRMKESDKARDIHQK 566
           +   Y    ++ KA  +  K
Sbjct: 531 IINGYGNSGDALKAFSVFDK 550



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 179/411 (43%), Gaps = 4/411 (0%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC  GKI  AL L  K I+KG + P+   +  LV+ L K G    A ++  EM   
Sbjct: 636  LIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNK 695

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               P+   +N  I  Y R  +  K   + STM +  +  N  T+NIL+H   K+  +   
Sbjct: 696  DVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARC 755

Query: 243  VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                 +++         D  +   L+  Y ++     A+ +   +  +    D   +N+L
Sbjct: 756  FMLYKDMIRHG---FLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNML 812

Query: 303  INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            I  FC   ++  AF    QM +   +P+V TYN L N L +     +A     VL ++G 
Sbjct: 813  ITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGS 872

Query: 363  APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             P    Y T+I G+C  G+I  A +    M    +       + I+ G      + NA  
Sbjct: 873  VPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIW 932

Query: 423  IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
            + DLML   +   V TF  L+    +  ++  A  L+  M    +  DV  YN+LI   C
Sbjct: 933  VLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLC 992

Query: 483  NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
              G I  A +LY+EM +R + P+   Y  LI   CA     E+E++   IQ
Sbjct: 993  ANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQ 1043



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 195/450 (43%), Gaps = 17/450 (3%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
             +++ LC+GG I  AL    ++       D +  N  +   C+ G+L  A  +I EM   
Sbjct: 565  GLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTN 624

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI-RPNRVTHNILVHALCKKGLLGD 241
               P+  TY   I G C+  ++  AL L       G+  PN   +  LV  L K G    
Sbjct: 625  DFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARA 684

Query: 242  AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
            A+    E+L  D      D +   +++D Y + G   +   + + M  KN+  ++  YN+
Sbjct: 685  ALYIFEEMLNKD---VEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNI 741

Query: 302  LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
            L++G+     ++  F  +  M++ GFLPD  ++++L+   C+    D A      ++  G
Sbjct: 742  LLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEG 801

Query: 362  VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
               D+ ++  +I   C   ++ KA E +  M +  V+P    +N + +G  R  D   A 
Sbjct: 802  HVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAH 861

Query: 422  SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
             +  ++L  G       +  LI    R G+I  A  L+ EM   GI       + ++   
Sbjct: 862  RVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGL 921

Query: 482  CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
             N   I  A+ + D ML   I P + T+T L+  +C   N+ +A E+ + ++   + +D 
Sbjct: 922  ANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDV 981

Query: 542  IPFRILK-------------KRYRRMKESD 558
            + + +L              K Y  MK+ D
Sbjct: 982  VAYNVLISGLCANGDIEAAFKLYEEMKQRD 1011



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 152/368 (41%), Gaps = 38/368 (10%)

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           N    ++L+    +  ++GDAV+     L    G   S V T  +++ S  K        
Sbjct: 104 NPAVFDLLIRVCLRNRMVGDAVQTF--YLMGFRGLNPS-VYTCNMVLGSLVKEQKVDMFW 160

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
           + +  M  K I  D+  +N+L+N  C  G   +A     +M + G  P  +TYNTLLN  
Sbjct: 161 SFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWY 220

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK+G+   AS     ++  G+  D  +Y   I  LC      K    L  M    V P  
Sbjct: 221 CKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNE 280

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +N +I G+ R G +  A  + D M  F +  N  T+N LI      G+I +A  L   
Sbjct: 281 ITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDV 340

Query: 462 MLLDGIFPDVFTYNLL-----------------------------------IGASCNLGH 486
           M+  G+ P+  TY  L                                   I   C  G 
Sbjct: 341 MVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGM 400

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A+QL D+ML+  + PD++T++ LI G    G +  A+E+  K+   GL  + I +  
Sbjct: 401 LEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYST 460

Query: 547 LKKRYRRM 554
           L   Y +M
Sbjct: 461 LIYNYCKM 468



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 32/252 (12%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++I   C       A+ + R +  +G V D  T N L+ + C+  +++KA  ++++M++ 
Sbjct: 776  SLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQF 835

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               PN  TYNA   G  R ++  KA  +   +  +G  P    +  L++ +C+ G +  A
Sbjct: 836  MVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGA 895

Query: 243  VKFLGEV------------------LADD--------------DGKATSDVITSTILMDS 270
            +K   E+                  LA+               + +    V T T LM  
Sbjct: 896  MKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHV 955

Query: 271  YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
            Y K  +  +AL L + M   +++ D+VAYNVLI+G C NGDI +AF  + +M +R   P+
Sbjct: 956  YCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPN 1015

Query: 331  VITYNTLLNCLC 342
               Y  L++  C
Sbjct: 1016 TSIYIVLIDSFC 1027



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 3/169 (1%)

Query: 119  RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
            ++++ +I  +C  G I  A+ L+ +M   G     +  + +V  L     +E A  V+  
Sbjct: 877  KQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDL 936

Query: 179  MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
            M EM+  P  AT+   +  YC+   + KAL L S M +  ++ + V +N+L+  LC  G 
Sbjct: 937  MLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGD 996

Query: 239  LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            +  A K   E+   D    TS  I   +L+DS+     + ++  L  D+
Sbjct: 997  IEAAFKLYEEMKQRDLWPNTSIYI---VLIDSFCAGNYQIESEKLLRDI 1042



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 54/119 (45%)

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           +SN   F+ LI    R   + DA      M   G+ P V+T N+++G+      + +   
Sbjct: 102 NSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWS 161

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            +  ML +GI PD+ T+  L+   C RG  K A  +  K++  G+    + +  L   Y
Sbjct: 162 FFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWY 220


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 231/468 (49%), Gaps = 38/468 (8%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            + L ++M   G  PD +T N L+N  C +  ++    V+ EM     SPN  T+ + + 
Sbjct: 111 VISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVK 170

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C  + + +A  L   M   G RPN VT+  L++ LC  G    AVK   E+L  + G 
Sbjct: 171 GLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGF 230

Query: 257 ATS---DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
             +   +++    ++DS  K+G   +   L+ +M  + I  D+VAY+ +I+G C  G   
Sbjct: 231 GVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWE 290

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A   F +M+  G  P+V+T+N L++ LCK GK++EA+H   ++ + G +PD  +Y T+I
Sbjct: 291 GAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLI 350

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            G C+ G I  AR+  +SM  K +  +   +NV+I+GY + G +  A  +   M+   + 
Sbjct: 351 DGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIM 410

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH------- 486
             V T+N L+    R G + DA++L  EM +  + P+  TYN+L+   C   H       
Sbjct: 411 PTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMEL 470

Query: 487 ----------------------------IHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
                                       I +A +L++ +   G+ P++ITYT +I G C 
Sbjct: 471 FHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCK 530

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            G ++ A+++F  ++  G A + + F  L + + +  E  K  ++ Q+
Sbjct: 531 SGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQE 578



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 199/417 (47%), Gaps = 9/417 (2%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
            ++++ LCLG +I  A  L RKM++ G  P+V+T+  L+N LC  G+   A  +  EM  
Sbjct: 166 TSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLN 225

Query: 182 ------MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
                 +   PN   Y   I   C+   +DK   LF  M   GI P+ V ++ ++H +C 
Sbjct: 226 GNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCH 285

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G    A     E++  D+G    +V+T  +L+D+  K G   +A  L   M Q+    D
Sbjct: 286 TGRWEGAKGLFNEMV--DEG-VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPD 342

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
              YN LI+GFCL G I  A   F  M  +G   D ++YN L+N  CK G++ EA   Y 
Sbjct: 343 TFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYR 402

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +    + P  I+Y T++ GL   G +  A      M    + PE   +N+++DG  +  
Sbjct: 403 EMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNN 462

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            LS A  +   + +     ++  FN LI    +   I  A  L   +  +G+ P+V TY 
Sbjct: 463 HLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYT 522

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           ++I   C  G +  A  L+  M  +G  P+++T+  L++G C    M++  E+  ++
Sbjct: 523 VMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEM 579



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 165/328 (50%), Gaps = 32/328 (9%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   + ++I  +C  G+   A  L  +M+ +G  P+V+T N L++ LCK G +E+A+
Sbjct: 269 ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEAN 328

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           H+++ M +   SP+  TYN  I G+C    +D A  LF +M + GI  + V++N+L++  
Sbjct: 329 HLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGY 388

Query: 234 CKKGLLGDAVKFLGEVLADD-----------------DGKA---------------TSDV 261
           CK G + +A K   E++  +                 +GK                T + 
Sbjct: 389 CKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPES 448

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
            T  IL+D   KN    +A+ L++ +   + Q  I  +N LI+G C    I  A   F +
Sbjct: 449 CTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNR 508

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           +   G  P+VITY  +++ LCK G+L+ A   +  + + G AP+ +++ T+++G C + +
Sbjct: 509 LSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDE 568

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIID 409
           + K  E L  M EK   P+    ++++D
Sbjct: 569 MQKVVELLQEMAEKDFSPDASTISIVVD 596



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 168/369 (45%), Gaps = 9/369 (2%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           T++ +   +  +I  LC  G I     L  +M  +G  PDV+ ++ +++ +C  G  E A
Sbjct: 233 TIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGA 292

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             +  EM +    PN  T+N  I   C+  ++++A HL   M   G  P+  T+N L+  
Sbjct: 293 KGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDG 352

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
            C +G + DA      V  +  G  T D ++  +L++ Y K+G   +A  L+ +M  K I
Sbjct: 353 FCLEGRIDDARDLF--VSMESKGIET-DAVSYNVLINGYCKSGRMVEAKKLYREMMCKEI 409

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
              ++ YN L+ G    G +  A+  F +M      P+  TYN LL+ LCK   L EA  
Sbjct: 410 MPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAME 469

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            +  L      P    +  +I GLC    I  ARE    +  + + P    + V+I G  
Sbjct: 470 LFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLC 529

Query: 413 RCGDLSNAFSIRDLMLSF---GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           + G L NA   +DL L     G + N+ TFN L+    +   +     L +EM      P
Sbjct: 530 KSGQLENA---KDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSP 586

Query: 470 DVFTYNLLI 478
           D  T ++++
Sbjct: 587 DASTISIVV 595



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 158/323 (48%), Gaps = 6/323 (1%)

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
           D + T  + +   L+ +  K    F  ++L+  M    +  D +  N+LIN +C    + 
Sbjct: 85  DMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVD 144

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
              A   +ML+RG  P+ +T+ +L+  LC   ++ EA+     + + G  P+ ++Y T++
Sbjct: 145 FGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLL 204

Query: 374 QGLCIHGDIVKAREFLLSMLEK------SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            GLC+ G+ + A +    ML        ++ P    +  IID   + G +     +   M
Sbjct: 205 NGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEM 264

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              G+S +V  ++++I      G    A  L  EM+ +G+ P+V T+N+LI A C  G +
Sbjct: 265 KGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKM 324

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A  L   M++RG +PD  TY  LI G C  G + +A ++F  +++ G+  D + + +L
Sbjct: 325 EEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVL 384

Query: 548 KKRYRRMKESDKARDIHQKWLLR 570
              Y +     +A+ ++++ + +
Sbjct: 385 INGYCKSGRMVEAKKLYREMMCK 407



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 117/248 (47%), Gaps = 3/248 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +ETD   +  +I   C  G++  A  L R+M+ K  +P V+T+N L+  L + G +  A 
Sbjct: 374 IETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAW 433

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           ++  EM     +P   TYN  + G C+ N L +A+ LF  + N+  +P+    N L+  L
Sbjct: 434 NLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGL 493

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   +  A +    +  +       +VIT T+++    K+G    A  L+  M +K   
Sbjct: 494 CKARKIEIARELFNRLSHEG---LEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCA 550

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++V +N L+ GFC N ++        +M ++ F PD  T + +++ L K  K  E  H 
Sbjct: 551 PNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHL 610

Query: 354 YGVLSKTG 361
                  G
Sbjct: 611 LPTFPAQG 618



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 65/119 (54%)

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
           S AFS+ + ++    +  + +FN L+ A  +    FD  SL K M L G+ PD  T N+L
Sbjct: 74  SEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNIL 133

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           I   CNL  +   L +  EMLRRG +P+ +T+T L+KG C    + EA  +  K+  +G
Sbjct: 134 INCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMG 192


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 234/475 (49%), Gaps = 9/475 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +  LD L+ M   G   C+   D   +  VI      G+ G A  L  +M ++G  PDV+
Sbjct: 245 QRALDLLQMMAKQGGA-CS--PDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVV 301

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+N +++ LCK   ++KA+ V+R+M+     P+  TY+  I GY  +  L +A  +F  M
Sbjct: 302 TYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREM 361

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G+ PN VT N  + +LCK G   +A +F   + A        D+ +   L+  Y   
Sbjct: 362 KKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGH---KPDIFSYCTLLHGYASE 418

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G     + L+N M    I  +   + +LI+ +   G +  A   F +M ++G  PDV+TY
Sbjct: 419 GCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTY 478

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           +T+++   + G+L +A   +  +   G+ P+   Y +IIQG C+HG +VKA+E +  M+ 
Sbjct: 479 STVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMIN 538

Query: 395 KSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           K  +P P I  ++ +I+   + G + +A  I DL    G    V TFN+LI      G +
Sbjct: 539 KG-IPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKM 597

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             AF +   M + G+ PD+ TYN L+      G I+  L L+ EM R+G+ P+ +TY  +
Sbjct: 598 DKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIM 657

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           + G    G    A + F ++   G  +    + I+     R   +D+A  + QK 
Sbjct: 658 LAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKL 712



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 216/422 (51%), Gaps = 13/422 (3%)

Query: 131 GGKIGTALWLRRKMIQKGT---VPDVLTHNYLVNELCKI--GDLEKA--DHVIREMSEMR 183
           G  +  AL+ R    + GT   VP   T+N L++  C+    DL  A    ++R   +M 
Sbjct: 132 GPALALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKM- 190

Query: 184 PSPNCATYNAFITGYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              +  T N  +   C  N  ++A++ L   M+  G  PN V+++I++ ALC   +   A
Sbjct: 191 ---DQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRA 247

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  L +++A   G  + DV+  + ++  +F  G+  +A +L+++M ++ ++ D+V YN++
Sbjct: 248 LDLL-QMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLI 306

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+  C    +  A     QM   G  PD +TY+ +++     G+L EA+  +  + K G+
Sbjct: 307 IDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGL 366

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ ++  + +  LC HG   +A EF  SM  K   P+   +  ++ GY   G  ++   
Sbjct: 367 IPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIG 426

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M S G+++N   F  LI A  + G + DA  +  EM   G+ PDV TY+ +I    
Sbjct: 427 LFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFS 486

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            +G +  A++ +++M+ RGI P+   Y+ +I+G C  G + +A+E+ +++   G+    I
Sbjct: 487 RMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDI 546

Query: 543 PF 544
            F
Sbjct: 547 VF 548



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 199/407 (48%), Gaps = 4/407 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++  A  + R+M ++G +P+++T N  +  LCK G  ++A      M+     P+  +Y
Sbjct: 349 GRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSY 408

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              + GY         + LF++M +NGI  N     IL+HA  K+G++ DA+    E+  
Sbjct: 409 CTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEM-- 466

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                 + DV+T + ++ ++ + G    A+  +N M  + IQ +   Y+ +I GFC++G 
Sbjct: 467 -QQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGG 525

Query: 312 ISSAFAYFCQMLKRGF-LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           +  A     +M+ +G   PD++ +++++N LCK G++ +A   + + +  G  P  I++ 
Sbjct: 526 LVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFN 585

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           ++I G C+ G + KA + L +M    V P+   +N ++DGY + G +++  ++   M   
Sbjct: 586 SLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRK 645

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV  N  T+  ++    R G    A     EM+  G    V  Y +++G  C       A
Sbjct: 646 GVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEA 705

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           + L+ ++    +   I     +I         +EA+E+FA I   GL
Sbjct: 706 IILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGL 752



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/395 (23%), Positives = 179/395 (45%), Gaps = 2/395 (0%)

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
           + L   M   G   +      L++   K G ++ A  +  EM +   SP+  TY+  I+ 
Sbjct: 425 IGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIST 484

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
           + R+  L  A+  F+ M   GI+PN   ++ ++   C  G L  A + + E++  + G  
Sbjct: 485 FSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMI--NKGIP 542

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
             D++  + +++S  K+G    A  +++       +  ++ +N LI+G+CL G +  AF 
Sbjct: 543 RPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFK 602

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
               M   G  PD++TYNTLL+   K G++++    +  + + GV P+ ++Y  ++ GL 
Sbjct: 603 ILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLF 662

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G  V AR+    M+E        I+ +I+ G  R      A  +   + +  V  ++ 
Sbjct: 663 RAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSIT 722

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
             N +I A  +     +A  L   +   G+ P+  TY ++I      G +  A  ++  M
Sbjct: 723 ILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSM 782

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            + GI P       +I+    +G + +A    +K+
Sbjct: 783 EKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV 817



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/387 (22%), Positives = 157/387 (40%), Gaps = 39/387 (10%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P   TYN  +   CR    D  L LF  +   G++ +++T N L+  LC      +AV  
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVN- 213

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
                                                L + M +     + V+Y++++  
Sbjct: 214 ------------------------------------VLLHRMSELGCVPNAVSYSIVLKA 237

Query: 306 FCLNGDISSAFAYFCQMLKRGFL--PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            C N     A      M K+G    PDV+ Y+T+++    +G+  +A   +  +++ GV 
Sbjct: 238 LCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVK 297

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y  II  LC    + KA   L  M      P+   ++ +I GY   G L  A  +
Sbjct: 298 PDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKM 357

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+  N+ T N+ + +  + G   +A      M   G  PD+F+Y  L+    +
Sbjct: 358 FREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYAS 417

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G     + L++ M   GI  +   +T LI  +  RG + +A  +F ++Q  G++ D + 
Sbjct: 418 EGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVT 477

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           +  +   + RM     A +   + + R
Sbjct: 478 YSTVISTFSRMGRLTDAMEKFNQMVAR 504



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 145/331 (43%), Gaps = 39/331 (11%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREM 179
           + ++I+  C+ G +  A  L  +MI KG   PD++  + ++N LCK G +  A  +    
Sbjct: 513 YSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLA 572

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
           +++   P   T+N+ I GYC V ++DKA  +   M   G+ P+ VT+N L+    K G +
Sbjct: 573 TDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRI 632

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            D +    E+          + +T  I++   F+ G    A   +++M +      +  Y
Sbjct: 633 NDGLTLFREM---QRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIY 689

Query: 300 NVLINGFCLN-------------GDISSAFA----------------------YFCQMLK 324
            +++ G C N             G ++  F+                       F  +  
Sbjct: 690 GIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISA 749

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G LP+  TY  ++  L K G +++A++ +  + K+G+ P       II+ L   G+I K
Sbjct: 750 SGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAK 809

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
           A  +L  +  K ++ E    ++++  + R G
Sbjct: 810 AGNYLSKVDGKRILLEASTTSLMLSLFSRKG 840



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 141/324 (43%), Gaps = 5/324 (1%)

Query: 242 AVKFLGEVLADDDGK--ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           A+     V  ++ G   A     T  ILMD   +       LAL+  + +  ++ D +  
Sbjct: 136 ALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITA 195

Query: 300 NVLINGFCLNGDISSAFAYFC-QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           N L+   C       A      +M + G +P+ ++Y+ +L  LC       A     +++
Sbjct: 196 NTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMA 255

Query: 359 KTGVA--PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           K G A  PD ++Y T+I G    G+  KA      M  + V P+   +N+IID   +   
Sbjct: 256 KQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A  +   M + G   +  T++ +I      G + +A  + +EM   G+ P++ T N 
Sbjct: 316 MDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNS 375

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            + + C  G    A + +D M  +G  PDI +Y  L+ G+ + G   +   +F  +++ G
Sbjct: 376 FLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNG 435

Query: 537 LAIDHIPFRILKKRYRRMKESDKA 560
           +A +   F IL   Y +    D A
Sbjct: 436 IAANCHVFTILIHAYAKRGMVDDA 459



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 95/218 (43%), Gaps = 3/218 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+I   L L R+M +KG  P+ +T+  ++  L + G    A     EM E   +   + Y
Sbjct: 630 GRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIY 689

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              + G CR N  D+A+ LF  +    ++ +    N +++A+ K     +A +    + A
Sbjct: 690 GIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISA 749

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   +  T  +++ +  K+G    A  +++ M +  I       N +I      G+
Sbjct: 750 SG---LLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGE 806

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           I+ A  Y  ++  +  L +  T + +L+   ++GK  E
Sbjct: 807 IAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQE 844


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 211/404 (52%), Gaps = 3/404 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            L L ++M  KG    + T + ++N  C+   L  A   + ++ ++   P+   +N  + 
Sbjct: 107 VLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN 166

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C    + +AL L   M   G +P  +T N LV+ LC  G + DAV  +  ++  + G 
Sbjct: 167 GLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV--ETGF 224

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
             ++V    +L +   K+G    A+ L   M ++NI+ D V Y+++I+G C +G + +AF
Sbjct: 225 QPNEVTYGPVL-NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F +M  +GF  D+ITYNTL+   C  G+ D+ +     + K  ++P+ +++  +I   
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
              G + +A + L  M+++ + P    +N +IDG+ +   L  A  + DLM+S G   ++
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            TFN LI    +   I D   L +EM L G+  +  TYN L+   C  G + +A +L+ E
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           M+ R + PDI++Y  L+ G C  G +++A E+F KI+   + +D
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 222/453 (49%), Gaps = 12/453 (2%)

Query: 90  LDLILKENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           L+  + E L+ +  M + G  P   TL T       ++  LCL GK+  A+ L  +M++ 
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNT-------LVNGLCLNGKVSDAVVLIDRMVET 222

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P+ +T+  ++N +CK G    A  ++R+M E     +   Y+  I G C+   LD A
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
            +LF+ M   G + + +T+N L+   C  G   D  K L +++     K + +V+T ++L
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR---KISPNVVTFSVL 339

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +DS+ K G   +A  L  +M Q+ I  + + YN LI+GFC    +  A      M+ +G 
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PD++T+N L+N  CK  ++D+    +  +S  GV  + ++Y T++QG C  G +  A++
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M+ + V P+   + +++DG    G+L  A  I   +    +  ++  +  +I    
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
               + DA+ L   + L G+  D   YN++I   C    +  A  L+ +M   G  PD +
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           TY  LI+ H    +   A E+  ++++ G   D
Sbjct: 580 TYNILIRAHLGDDDATTAAELIEEMKSSGFPAD 612



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 217/444 (48%), Gaps = 3/444 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C   K+  A     K+++ G  PD +  N L+N LC    + +A  ++  M EM 
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P   T N  + G C   ++  A+ L   M   G +PN VT+  +++ +CK G    A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L ++   ++     D +  +I++D   K+G    A  L+N+M  K  + DI+ YN LI
Sbjct: 249 ELLRKM---EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            GFC  G           M+KR   P+V+T++ L++   K+GKL EA      + + G+A
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ I+Y ++I G C    + +A + +  M+ K   P+   +N++I+GY +   + +   +
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   GV +N  T+N L+    + G +  A  L +EM+   + PD+ +Y +L+   C+
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  AL+++ ++ +  +  DI  Y  +I G C    + +A ++F  +   G+ +D   
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545

Query: 544 FRILKKRYRRMKESDKARDIHQKW 567
           + I+     R     KA  + +K 
Sbjct: 546 YNIMISELCRKDSLSKADILFRKM 569



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 193/403 (47%), Gaps = 6/403 (1%)

Query: 171 KADHVI---REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           KAD  +   R+M + RP P    +N   +   +  + +  L L   M + GI  +  T +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           I+++  C+   L  A   +G+++    G     VI +T L++         +AL L + M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKL--GYEPDTVIFNT-LLNGLCLECRVSEALELVDRM 184

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            +   +  ++  N L+NG CLNG +S A     +M++ GF P+ +TY  +LN +CK G+ 
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
             A      + +  +  D + Y  II GLC  G +  A      M  K    +   +N +
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I G+   G   +   +   M+   +S NV TF+ LI +  + G + +A  L KEM+  GI
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            P+  TYN LI   C    +  A+Q+ D M+ +G  PDI+T+  LI G+C    + +  E
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +F ++   G+  + + +  L + + +  + + A+ + Q+ + R
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 38/280 (13%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A  L ++M+Q+G  P+ +T+N L++  CK   LE+A  ++  M      P+  T+
Sbjct: 347 GKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTF 406

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYC+ N +D  L LF  M+  G+  N VT+N LV   C+ G L  A K   E+++
Sbjct: 407 NILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
               +   D+++  IL+D    NG+  +AL ++  + +  ++ DI  Y ++I+G C    
Sbjct: 467 R---RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASK 523

Query: 312 ISSAFAYFC-----------------------------------QMLKRGFLPDVITYNT 336
           +  A+  FC                                   +M + G  PD +TYN 
Sbjct: 524 VDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNI 583

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           L+           A+     +  +G   D  + K +I  L
Sbjct: 584 LIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 60/123 (48%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           +  +E D   ++ +I  +C   K+  A  L   +  KG   D   +N +++ELC+   L 
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           KAD + R+M+E   +P+  TYN  I  +   ++   A  L   M ++G   +  T  +++
Sbjct: 561 KADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620

Query: 231 HAL 233
           + L
Sbjct: 621 NML 623


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 220/433 (50%), Gaps = 3/433 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D      +I+ L L GK+  A+ L  +M++ G  PDV+T+N +VN +C+ GD   A  
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++R+M E     +  TY+  I   CR   +D A+ LF  M   GI+ + VT+N LV  LC
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K G   D    L ++++ +      +VIT  +L+D + K G   +A  L+ +M  + I  
Sbjct: 275 KAGKWNDGALLLKDMVSRE---IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           +I+ YN L++G+C+   +S A      M++    PD++T+ +L+   C   ++D+    +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +SK G+  + ++Y  ++QG C  G I  A E    M+   V+P+   + +++DG    
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G L  A  I + +    +   +  +  +I    +GG + DA++L   +   G+ P+V TY
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
            ++I   C  G +  A  L  +M   G  P+  TY  LI+ H   G++  + ++  ++++
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571

Query: 535 LGLAIDHIPFRIL 547
            G + D    +++
Sbjct: 572 CGFSADASSIKMV 584



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 192/384 (50%), Gaps = 5/384 (1%)

Query: 166 IGDLEKADHV--IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           I D++K D +   +EM   RP P+   ++ F +   R  + +  L     +  NGI  N 
Sbjct: 64  IVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI 123

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
            T NI+++  C+      A   LG+V+         D  T   L+   F  G   +A+ L
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLG---YEPDTTTFNTLIKGLFLEGKVSEAVVL 180

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            + M +   Q D+V YN ++NG C +GD S A     +M +R    DV TY+T+++ LC+
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G +D A   +  +   G+    ++Y ++++GLC  G        L  M+ + +VP    
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +NV++D + + G L  A  +   M++ G+S N+ T+N L+        + +A ++   M+
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
            +   PD+ T+  LI   C +  +   ++++  + +RG+  + +TY+ L++G C  G +K
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420

Query: 524 EAEEVFAKIQTLGLAIDHIPFRIL 547
            AEE+F ++ + G+  D + + IL
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGIL 444



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 186/381 (48%), Gaps = 8/381 (2%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           LD L+ M +       ++ D   +  +I  LC  G I  A+ L ++M  KG    V+T+N
Sbjct: 213 LDLLRKMEER-----NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            LV  LCK G       ++++M      PN  T+N  +  + +  +L +A  L+  M   
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           GI PN +T+N L+   C +  L +A   L  ++ +   K + D++T T L+  Y      
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN---KCSPDIVTFTSLIKGYCMVKRV 384

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
              + ++ ++ ++ +  + V Y++L+ GFC +G I  A   F +M+  G LPDV+TY  L
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           L+ LC  GKL++A   +  L K+ +    + Y TII+G+C  G +  A     S+  K V
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P    + V+I G  + G LS A  +   M   G + N  T+N LI A  R G +  +  
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564

Query: 458 LKKEMLLDGIFPDVFTYNLLI 478
           L +EM   G   D  +  ++I
Sbjct: 565 LIEEMKSCGFSADASSIKMVI 585



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 194/397 (48%), Gaps = 3/397 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L ++MI+   +P ++  +   + + +           +++     + N  T N  I 
Sbjct: 72  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            +CR  +   A  +   +   G  P+  T N L+  L  +G + +AV  +  ++   +  
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV---ENG 188

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              DV+T   +++   ++GD   AL L   M ++N++ D+  Y+ +I+  C +G I +A 
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           + F +M  +G    V+TYN+L+  LCK GK ++ +     +    + P+ I++  ++   
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
              G + +A E    M+ + + P    +N ++DGY     LS A ++ DLM+    S ++
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            TF +LI        + D   + + +   G+  +  TY++L+   C  G I LA +L+ E
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           M+  G+ PD++TY  L+ G C  G +++A E+F  +Q
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 149/284 (52%), Gaps = 4/284 (1%)

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           I  +I   N++IN FC       A++   +++K G+ PD  T+NTL+  L  +GK+ EA 
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                + + G  PD ++Y +I+ G+C  GD   A + L  M E++V  +   ++ IID  
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            R G +  A S+   M + G+ S+V T+N+L+    + G   D   L K+M+   I P+V
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            T+N+L+      G +  A +LY EM+ RGI+P+IITY  L+ G+C +  + EA  +   
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRN 571
           +     + D + F  L K Y  +K  D      R+I ++ L+ N
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 402



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 145/299 (48%), Gaps = 7/299 (2%)

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
           K  A+AL+ +M +      +V ++   +        +    +  Q+   G   ++ T N 
Sbjct: 69  KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           ++NC C+  K   A    G + K G  PD  ++ T+I+GL + G + +A   +  M+E  
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P+   +N I++G  R GD S A  +   M    V ++VFT++ +I +  R G I  A 
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
           SL KEM   GI   V TYN L+   C  G  +    L  +M+ R I P++IT+  L+   
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARDIHQKWLLRNK 572
              G ++EA E++ ++ T G++ + I +  L   Y    R+ E++   D+    ++RNK
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL----MVRNK 363



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 136/289 (47%), Gaps = 39/289 (13%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A  L ++MI +G  P+++T+N L++  C    L +A++++  M   + SP+  T+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
            + I GYC V  +D  + +F  ++  G+  N VT++ILV   C+ G +  A +   E+++
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ---------------------- 289
                   DV+T  IL+D    NG   +AL ++ D+ +                      
Sbjct: 432 HG---VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488

Query: 290 -------------KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
                        K ++ +++ Y V+I+G C  G +S A     +M + G  P+  TYNT
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           L+    + G L  ++     +   G + D  S K +I  L + G++ K+
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML-LSGELDKS 596



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 59/113 (52%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  +C GGK+  A  L   +  KG  P+V+T+  +++ LCK G L +A+ ++R+M 
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           E   +PN  TYN  I  + R  +L  +  L   M + G   +  +  +++  L
Sbjct: 536 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 196/392 (50%), Gaps = 3/392 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  GK+  A      M   G  P+++T+N +V+  C  G +E AD ++  M   +
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY + I+G C+   L++A  +F  M   G+RP+ V +N L+   C KG L  A 
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS 346

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            +  E+L        S   T   L+ + F      +A  +  ++ +K I  D + YN+LI
Sbjct: 347 AYKDEMLKKGISPTMS---TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILI 403

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG+C   +   AF    +ML  G  P   TY +LL+ L K+ ++ EA   +  ++  GV 
Sbjct: 404 NGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVL 463

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD I +  +I G C + ++  A E L  M    V P+   +N I+ G+ R G +  A  +
Sbjct: 464 PDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAREL 523

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M   G+  +  +FN LI   +R G I DAF ++ EML  G  P V TYN L+   C 
Sbjct: 524 FDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCK 583

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
                LA +L  EM+ +G+TPD  TY  LI+G
Sbjct: 584 NQEGDLAEELLKEMVSKGMTPDDTTYFTLIEG 615



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 212/416 (50%), Gaps = 9/416 (2%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           +YL+   C +   ++A      M E    P   T N+ ++ + ++N  + A  L++ M  
Sbjct: 155 DYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFR 214

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
             I+ +  T NI+++ LCK+G L  A  F+G +   +      +++T   ++  Y  +G 
Sbjct: 215 LRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHM---ETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
              A A+   M ++ I+ D   Y  LI+G C  G +  A   F +M+++G  P  + YNT
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L++  C +G LD AS +   + K G++P   +Y ++I  L +     +A   +  + EK 
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           + P+   +N++I+GY RC +   AF + D ML+ G+     T+ +L+   ++   + +A 
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L K++  +G+ PD   +N LI   C+  ++  A +L  +M R  + PD +T+  +++GH
Sbjct: 452 DLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           C  G ++EA E+F +++  G+  DHI F  L   Y R        DI   + +RN+
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRG------DIKDAFRVRNE 561



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 11/142 (7%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L +++DR+K      P   T  T  + H       C  GK+  A  L  +M ++G  PD 
Sbjct: 488 LLKDMDRMKV----PPDEVTFNTIMQGH-------CREGKVEEARELFDEMKRRGIKPDH 536

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           ++ N L++   + GD++ A  V  EM +   +P   TYNA + G C+  E D A  L   
Sbjct: 537 ISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKE 596

Query: 214 MANNGIRPNRVTHNILVHALCK 235
           M + G+ P+  T+  L+  + K
Sbjct: 597 MVSKGMTPDDTTYFTLIEGIAK 618



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I  A  +R +M+  G  P VLT+N LV  LCK  + + A+ +++EM     +P+  TY
Sbjct: 550 GDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTY 609

Query: 192 NAFITGYCRVNELDK 206
              I G  +VN  D+
Sbjct: 610 FTLIEGIAKVNIPDE 624


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 212/418 (50%), Gaps = 35/418 (8%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P   + N L+  L     ++ A+   R     R SP+  T+N  I+G CR+ +L KA  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              +   G+ P+  T+N L+   CKKG                                 
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKG--------------------------------- 240

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
               G+ +    L  +M +  I    V + VLING+C N + ++A   F +M ++G    
Sbjct: 241 --GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+TYN+L++ LC +GK++E       +   G++P++I++  +++G C  G +  A +++ 
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M E++V P+  I+ ++IDGY R G + +A ++++ M   G+S NV T+N LI   +R G
Sbjct: 359 GMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
               A  L  EM   GI  DV TYN+LIGA C  G +  A++L DEM   G+ P+ +TY 
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            +I+G C +GN+K A E+  +++      + + + +  K + ++ + D+A D+  + L
Sbjct: 479 TIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 185/386 (47%), Gaps = 22/386 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCK---IGDLEKADHVIREMS 180
           VI  LC  G++  A  + + +   G  P V T+N L++  CK    G++   D +++EM 
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV 256

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   SP   T+   I GYC+ +    A+ +F  M   GI  + VT+N L+  LC +G + 
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVE 316

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           + VK + E+   +D   + + IT   ++  + K G    A    + M ++N++ D+V Y 
Sbjct: 317 EGVKLMEEM---EDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYT 373

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI+G+   G +  A A    M K+G  P+V TYN L+    + G    AS     + + 
Sbjct: 374 ILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 433

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+  D ++Y  +I  LC  G++ KA + L  M E  + P    +N II G+   G++ +A
Sbjct: 434 GIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSA 493

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           + IR  M      +NV T+N  I    + G + +A  L  EML   + P+  TY      
Sbjct: 494 YEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYE----- 548

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDI 506
                       + + M+ +G TPDI
Sbjct: 549 -----------TIKEGMMEKGYTPDI 563



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 181/382 (47%), Gaps = 6/382 (1%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R  +++   PD+ T N +++ LC+IG L KA  V +++     +P+ ATYN+ I GYC+ 
Sbjct: 180 RSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKK 239

Query: 202 NELDKALH---LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
                  H   L   M   GI P  VT  +L++  CK      AV+   E+     G A 
Sbjct: 240 GGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM--KQQGIAA 297

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           S V+T   L+      G   + + L  +M    +  + + +  ++ GFC  G ++ A  +
Sbjct: 298 S-VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDW 356

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
              M +R   PDV+ Y  L++   + GK+++A      ++K G++P+  +Y  +I G   
Sbjct: 357 IDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR 416

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            GD   A   L  M EK +  +   +NV+I      G++  A  + D M   G+  N  T
Sbjct: 417 SGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLT 476

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N +I      G+I  A+ ++  M       +V TYN+ I   C +G +  A  L +EML
Sbjct: 477 YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536

Query: 499 RRGITPDIITYTELIKGHCARG 520
            + + P+ ITY  + +G   +G
Sbjct: 537 DKCLVPNGITYETIKEGMMEKG 558



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 130/258 (50%), Gaps = 3/258 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC  GK+   + L  +M   G  P+ +T   ++   CK G +  A+  I  M+E 
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   Y   I GY R+ +++ A+ +   MA  GI PN  T+N L+    + G    A
Sbjct: 364 NVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E+    +    +DV+T  +L+ +    G+  +A+ L ++M +  ++ + + YN +
Sbjct: 424 SGLLDEM---KEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I GFC  G+I SA+    +M K     +V+TYN  +   C+ GK+DEA+     +    +
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCL 540

Query: 363 APDQISYKTIIQGLCIHG 380
            P+ I+Y+TI +G+   G
Sbjct: 541 VPNGITYETIKEGMMEKG 558



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 5/141 (3%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  M++ G     +E D   +  +I  LC  G++  A+ L  +M + G  P+ LT+N ++
Sbjct: 427 LDEMKEKG-----IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTII 481

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
              C  G+++ A  +   M + R   N  TYN FI  +C++ ++D+A  L + M +  + 
Sbjct: 482 QGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLV 541

Query: 221 PNRVTHNILVHALCKKGLLGD 241
           PN +T+  +   + +KG   D
Sbjct: 542 PNGITYETIKEGMMEKGYTPD 562


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 205/401 (51%), Gaps = 4/401 (0%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           IR LC  G++  A+ L   M +   VPDV+T+N L+  LCK    ++A H +R M     
Sbjct: 228 IRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+  TYN  I GYC+++ + +A  L       G  P++VT+  L++ LC +G +  A++
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 346

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              E  A        D++    L+      G    AL + N+M ++    DI  YN++IN
Sbjct: 347 LFNEAQAKG---IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 403

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G+IS A       + +G+LPDV T+NTL++  CK+ KLD A      + + G+AP
Sbjct: 404 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 463

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D I+Y +++ GLC  G + +  E    M+ K   P P  +N++I+ + R   +  A  + 
Sbjct: 464 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 523

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
             M   G+  +  +FN LI    R G +  A+ L +++   G      T+N LIGA    
Sbjct: 524 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 583

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            ++H+A +++DEML +G   D  TY  LI G C   N+  A
Sbjct: 584 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRA 624



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 204/390 (52%), Gaps = 3/390 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR LC       A+   R+M+ +G +PD  T+N +++  CKI  +++A  ++++     
Sbjct: 261 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 320

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY + I G C   ++++AL LF+     GI+P+ V +N LV  LC +GL+  A+
Sbjct: 321 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 380

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + + E+  +       D+ T  I+++   K G+   A  + ND   K    D+  +N LI
Sbjct: 381 QVMNEMAEEG---CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 437

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+C    + SA     +M + G  PD ITYN++LN LCK GK++E +  +  +   G  
Sbjct: 438 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH 497

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ I+Y  +I+  C    + +A + ++ M ++ + P+   +N +I G+ R GDL  A+ +
Sbjct: 498 PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLL 557

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              +   G S+   TFN LI A +   ++  A  +  EML  G   D +TY +LI  SC 
Sbjct: 558 FQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCK 617

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELI 513
             ++  A     EM+++G  P + T+  +I
Sbjct: 618 TANVDRAYMHLVEMIKKGFIPSMSTFGRVI 647



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 213/453 (47%), Gaps = 8/453 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   H   +R  CL  +   AL L R +  +G V     +  +V  L   G    A 
Sbjct: 116 VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV----AYCTVVCGLYAHGHTHDAR 171

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  +M      PN A +N  +   C+  ++ +A  L   +   G+  N  T+NI +  L
Sbjct: 172 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 231

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C+ G L +AV+ +  + A     A  DV+T   L+    K     +A+     M  +   
Sbjct: 232 CEAGRLPEAVRLVDGMRA----YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 287

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D   YN +I+G+C    +  A       + +GF+PD +TY +L+N LC +G ++ A   
Sbjct: 288 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 347

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +      G+ PD + Y ++++GLC+ G I+ A + +  M E+   P+   +N++I+G  +
Sbjct: 348 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 407

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G++S+A  + +  +  G   +VFTFN LI    +   +  A  L + M   GI PD  T
Sbjct: 408 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 467

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN ++   C  G ++   + + EM+ +G  P+ ITY  LI+  C    M+EA +V  K+ 
Sbjct: 468 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 527

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             GL  D + F  L   + R  + + A  + QK
Sbjct: 528 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 560



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 211/427 (49%), Gaps = 4/427 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  V+  L   G    A  L  +M+     P++   N +++ LCK GD+ +A  ++ ++ 
Sbjct: 154 YCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVI 213

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   S N  TYN +I G C    L +A+ L   M    + P+ VT+N L+  LCKK +  
Sbjct: 214 QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQ 272

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+ +L  ++  + G    D   +TI+ D Y K     +A  L  D   K    D V Y 
Sbjct: 273 EAMHYLRRMM--NQGCLPDDFTYNTII-DGYCKISMVQEATELLKDAVFKGFVPDQVTYC 329

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LING C  GD+  A   F +   +G  PD++ YN+L+  LC QG +  A      +++ 
Sbjct: 330 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 389

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  PD  +Y  +I GLC  G+I  A   +   + K  +P+   +N +IDGY +   L +A
Sbjct: 390 GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 449

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + M  +G++ +  T+N+++    + G + +     +EM+L G  P+  TYN+LI  
Sbjct: 450 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIEN 509

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    +  A ++  +M + G+ PD +++  LI G C  G+++ A  +F K++  G +  
Sbjct: 510 FCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 569

Query: 541 HIPFRIL 547
              F  L
Sbjct: 570 ADTFNTL 576



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 198/413 (47%), Gaps = 8/413 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E +  L+ M + G     L  D+  +  +I   C    +  A  L +  + KG VPD +
Sbjct: 272 QEAMHYLRRMMNQG----CLPDDFTYNT-IIDGYCKISMVQEATELLKDAVFKGFVPDQV 326

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  L+N LC  GD+E+A  +  E       P+   YN+ + G C    +  AL + + M
Sbjct: 327 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 386

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
           A  G  P+  T+NI+++ LCK G + DA   + + +         DV T   L+D Y K 
Sbjct: 387 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG---YLPDVFTFNTLIDGYCKR 443

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
                AL L   M++  I  D + YN ++NG C  G ++     F +M+ +G  P+ ITY
Sbjct: 444 LKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITY 503

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N L+   C+  K++EAS     +S+ G+ PD +S+ T+I G C +GD+  A      + E
Sbjct: 504 NILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 563

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K        +N +I  +    ++  A  I D MLS G  ++ +T+  LI    +  ++  
Sbjct: 564 KGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDR 623

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           A+    EM+  G  P + T+  +I +      +  A+ +   M++ G+ P+++
Sbjct: 624 AYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 183/429 (42%), Gaps = 45/429 (10%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+  G  PD+ TH   +   C    L    H+   +    P      Y   + G     
Sbjct: 110 RMLAAGVSPDLHTHTIRLRSFC----LTARPHIALRLLRALPHRGAVAYCTVVCGLYAHG 165

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
               A  LF  M +  + PN    N ++HALCK+G                         
Sbjct: 166 HTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRG------------------------- 200

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
                        D  +A  L   + Q+ +  ++  YN+ I G C  G +  A      M
Sbjct: 201 -------------DVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM 247

Query: 323 LKRGF-LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
             R + +PDV+TYNTL+  LCK+    EA H+   +   G  PD  +Y TII G C    
Sbjct: 248 --RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 305

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + +A E L   + K  VP+   +  +I+G    GD+  A  + +   + G+  ++  +N+
Sbjct: 306 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 365

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           L+      G I  A  +  EM  +G  PD+ TYN++I   C +G+I  A  + ++ + +G
Sbjct: 366 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 425

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
             PD+ T+  LI G+C R  +  A ++  ++   G+A D I +  +     +  + ++  
Sbjct: 426 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 485

Query: 562 DIHQKWLLR 570
           +  Q+ +L+
Sbjct: 486 ETFQEMILK 494


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/429 (31%), Positives = 212/429 (49%), Gaps = 6/429 (1%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R+M   G  P +   N ++  L      +    V  EM ++   P+  TYN  +  + R 
Sbjct: 185 REMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFRE 244

Query: 202 NELDKALHLFSTMA--NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
             +D+A  L   M     G  P+ VT+N++++ L +KG L  A + +  +       A  
Sbjct: 245 GRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASA-- 302

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
              T   L+  YF  G   +A AL  +M  + I   +V YN +I+G   +G++ +A   F
Sbjct: 303 --FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKF 360

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M   G LPD+ITYN+L+N  CK G L EA   +G L + G+AP  ++Y  ++ G C  
Sbjct: 361 VEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRL 420

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           GD+ +AR F   M+E+   P+   + ++++G  +  +L+      D MLS G+  + F +
Sbjct: 421 GDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAY 480

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N  I AE   GS  +AF L + M+  GI  D  TYN+ +   C  G++  A  L+ +M+ 
Sbjct: 481 NTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVS 540

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G+ PD ITYT LI  HC RG ++EA ++F  +   GL    + + +    Y R      
Sbjct: 541 DGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYS 600

Query: 560 ARDIHQKWL 568
           A    QK L
Sbjct: 601 AYGWFQKML 609



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/410 (32%), Positives = 208/410 (50%), Gaps = 38/410 (9%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A  L+ +M  +G VP V+T+N +++ + + G++E A     EM  M   P+  TY
Sbjct: 316 GSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITY 375

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N+ I GYC+   L +AL LF  +   G+ P+ +T+NIL+   C+ G L +A +F  E++ 
Sbjct: 376 NSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMV- 434

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     DV T TILM+   K  +       +++M  K +Q D  AYN  I+   + G 
Sbjct: 435 --EQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGS 492

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
            S AF     M+ RG   D +TYN  L+ LCK G L +A   +  +   G+ PD I+Y  
Sbjct: 493 TSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTC 552

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I   C  G + +AR+                   I DG                ML  G
Sbjct: 553 LIHAHCERGRLREARD-------------------IFDG----------------MLVSG 577

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  +  T+   I A  R G+++ A+   ++ML +G+ P+  TYN+LI A C +G  +LA 
Sbjct: 578 LPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAY 637

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           Q + EML RG++P+  TYT LI G+C  GN +EA  +++++   G+  DH
Sbjct: 638 QHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDH 687



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/431 (30%), Positives = 218/431 (50%), Gaps = 8/431 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS---PNCATYNAFITGYC 199
           +M+Q G  P ++T+N L++   + G +++A  ++REM E RP    P+  TYN  I G  
Sbjct: 221 EMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREM-EARPGGCLPSDVTYNVVINGLA 279

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R  EL+KA  L   M  +  + +  T N L+     +G +  A     E+  +++G   +
Sbjct: 280 RKGELEKAAQLVDRMRMSK-KASAFTFNPLITGYFARGSVEKAGALQLEM--ENEGIVPT 336

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
            V+T   ++   F++G+   A   + +M    +  D++ YN LING+C  G++  A   F
Sbjct: 337 -VVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLF 395

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             + + G  P V+TYN LL+  C+ G L+EA  F   + + G  PD  +Y  ++ G    
Sbjct: 396 GDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKV 455

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
            ++   REF   ML K + P+   +N  I      G  S AF + ++M+S G+SS+  T+
Sbjct: 456 RNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTY 515

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N  +    + G++ DA+ L  +M+ DG+ PD  TY  LI A C  G +  A  ++D ML 
Sbjct: 516 NIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLV 575

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G+ P  +TYT  I  +C RGN+  A   F K+   G+  + + + +L     RM  ++ 
Sbjct: 576 SGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNL 635

Query: 560 ARDIHQKWLLR 570
           A     + L R
Sbjct: 636 AYQHFHEMLER 646



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 185/389 (47%), Gaps = 2/389 (0%)

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
             REM+     P     N  +         D    +++ M   GI P+ VT+N L+ +  
Sbjct: 183 AFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFF 242

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           ++G +  A K L E+ A   G   SDV T  ++++   + G+  +A  L + M + + + 
Sbjct: 243 REGRVDQAAKLLREMEARPGGCLPSDV-TYNVVINGLARKGELEKAAQLVDRM-RMSKKA 300

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
               +N LI G+   G +  A A   +M   G +P V+TYNT+++ + + G ++ A   +
Sbjct: 301 SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKF 360

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G+ PD I+Y ++I G C  G++ +A      +    + P    +N+++DGY R 
Sbjct: 361 VEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRL 420

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           GDL  A   +  M+  G   +V T+  L+    +  ++        EML  G+ PD F Y
Sbjct: 421 GDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAY 480

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N  I A   LG    A QL + M+ RGI+ D +TY   + G C  GN+K+A  ++ K+ +
Sbjct: 481 NTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVS 540

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDI 563
            GL  D I +  L   +       +ARDI
Sbjct: 541 DGLQPDCITYTCLIHAHCERGRLREARDI 569



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 3/329 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G +  ALWL   + + G  P VLT+N L++  C++GDLE+A    +EM E 
Sbjct: 377 SLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQ 436

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+ +TY   + G  +V  L      F  M + G++P+   +N  + A    G   +A
Sbjct: 437 GCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEA 496

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L EV+       +SD +T  I +D   K+G+   A  LW  M    +Q D + Y  L
Sbjct: 497 FQ-LTEVMISRG--ISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCL 553

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+  C  G +  A   F  ML  G  P  +TY   ++  C++G L  A  ++  + + GV
Sbjct: 554 IHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGV 613

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P++++Y  +I  LC  G    A +    MLE+ + P  + + ++IDG  + G+   A  
Sbjct: 614 RPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIR 673

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGS 451
           +   M   G+  +  T NAL      G S
Sbjct: 674 LYSEMHQHGIHPDHCTHNALFKGFDEGQS 702



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 3/153 (1%)

Query: 100 RLKTMRDT--GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           RL+  RD   G +   L      +   I   C  G + +A    +KM+++G  P+ +T+N
Sbjct: 562 RLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYN 621

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            L++ LC++G    A     EM E   SPN  TY   I G C+    ++A+ L+S M  +
Sbjct: 622 VLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQH 681

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           GI P+  THN L      +G    A++++  V+
Sbjct: 682 GIHPDHCTHNALFKGF-DEGQSKHAIQYMENVV 713



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 64/136 (47%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  +I   C  G++  A  +   M+  G  P  +T+   ++  C+ G+L  A 
Sbjct: 543 LQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAY 602

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
              ++M E    PN  TYN  I   CR+   + A   F  M   G+ PN+ T+ +L+   
Sbjct: 603 GWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGN 662

Query: 234 CKKGLLGDAVKFLGEV 249
           CK+G   +A++   E+
Sbjct: 663 CKEGNWEEAIRLYSEM 678


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 233/446 (52%), Gaps = 6/446 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQK---GTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +++ LC   +   AL L   M      G+ PDV+++  ++N   K GD +KA     EM 
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    P+  TYN+ I   C+   +DKA+ + +TM  NG+ P+ +T+N ++H  C  G   
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 283

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+ FL ++ +D       DV+T ++LMD   KNG   +A  +++ M ++ ++ +I  Y 
Sbjct: 284 EAIGFLKKMRSDG---VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYG 340

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L+ G+   G +         M++ G  PD   ++ L+    KQGK+D+A   +  + + 
Sbjct: 341 TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 400

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+ ++Y  +I  LC  G +  A  +   M+++ + P   ++N +I G   C     A
Sbjct: 401 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 460

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +   ML  G+  N   FN++I +  + G + ++  L + M+  G+ P+V TYN LI  
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLING 520

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  G +  A++L   M+  G+ P+ +TY+ LI G+C    M++A  +F ++++ G++ D
Sbjct: 521 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580

Query: 541 HIPFRILKKRYRRMKESDKARDIHQK 566
            I + I+ +   + + +  A++++ +
Sbjct: 581 IITYNIILQGLFQTRRTAAAKELYVR 606



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 194/397 (48%), Gaps = 1/397 (0%)

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
             PD+ T+  L+   C+ G L+     +  + +     +   +   + G C       A+
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142

Query: 209 HL-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
            +    M   G  PN  ++NIL+  LC +    +A++ L  +  D  G +  DV++ T +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           ++ +FK GD  +A + +++M  + I  D+V YN +I   C    +  A      M+K G 
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +PD +TYN++L+  C  G+  EA  F   +   GV PD ++Y  ++  LC +G  ++AR+
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
              SM ++ + PE   +  ++ GY   G L     + DLM+  G+  + + F+ LI A  
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G +  A  +  +M   G+ P+  TY  +IG  C  G +  A+  +++M+  G++P  I
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            Y  LI G C     + AEE+  ++   G+ ++ I F
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 479



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 196/430 (45%), Gaps = 19/430 (4%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++ G  PD    + L+    K G +++A  V  +M +   +PN  TY A I   C+   
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           ++ A+  F  M + G+ P  + +N L+H LC       A + + E+L  D G   + +  
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML--DRGICLNTIFF 479

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           ++I+ DS+ K G   ++  L+  M +  ++ +++ YN LING+CL G +  A      M+
Sbjct: 480 NSII-DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  P+ +TY+TL+N  CK  ++++A   +  +  +GV+PD I+Y  I+QGL       
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A+E  + + E     E   +N+I+ G  +     +A  +   +    +     TFN +I
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            A  + G   +A  L      +G+ P+ +TY L+       G +    QL+  M   G T
Sbjct: 659 DALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 718

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKI---------QTLGLAIDHIP-------FRIL 547
            D      +++    RG +  A    + I          T  L ID +        +R L
Sbjct: 719 VDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYYRFL 778

Query: 548 KKRYRRMKES 557
            ++Y+   ES
Sbjct: 779 PEKYKSFIES 788



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 152/315 (48%), Gaps = 4/315 (1%)

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           + T D+ T  IL+    + G      A   ++ +K  + D +A+  L+ G C +   S A
Sbjct: 82  EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141

Query: 316 FAYFCQ-MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK---TGVAPDQISYKT 371
                + M + G +P+V +YN LL  LC + +  EA     +++     G  PD +SY T
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G    GD  KA      ML++ ++P+   +N II    +   +  A  + + M+  G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           V  +  T+N+++      G   +A    K+M  DG+ PDV TY+LL+   C  G    A 
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +++D M +RG+ P+I TY  L++G+  +G + E   +   +   G+  DH  F IL   Y
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381

Query: 552 RRMKESDKARDIHQK 566
            +  + D+A  +  K
Sbjct: 382 AKQGKVDQAMLVFSK 396



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 149/333 (44%), Gaps = 38/333 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE- 181
           AVI  LC  G++  A+    +MI +G  P  + +N L++ LC     E+A+ +I EM + 
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470

Query: 182 ----------------------------------MRPSPNCATYNAFITGYCRVNELDKA 207
                                             +   PN  TYN  I GYC   ++D+A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + L S M + G++PN VT++ L++  CK   + DA+    E+   +    + D+IT  I+
Sbjct: 531 MKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM---ESSGVSPDIITYNII 587

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +   F+      A  L+  + +   Q ++  YN++++G C N     A   F  +     
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 647

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             +  T+N +++ L K G+ DEA   +   S  G+ P+  +Y+ + + +   G + +  +
Sbjct: 648 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 707

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
             LSM +     +  + N I+    + G+++ A
Sbjct: 708 LFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 122/300 (40%), Gaps = 38/300 (12%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR  ++ +   +  +I   CL GK+  A+ L   M+  G  P+ +T++ L+N  CKI  +
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E A  + +EM     SP+  TYN  + G  +      A  L+  +  +G +    T+NI+
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +H LCK  L  DA++                                 FQ L L      
Sbjct: 623 LHGLCKNKLTDDALQM--------------------------------FQNLCLM----- 645

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
            +++ +   +N++I+     G    A   F      G +P+  TY  +   +  QG L+E
Sbjct: 646 -DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
               +  +   G   D      I++ L   G+I +A  +L  + EK    E    ++ ID
Sbjct: 705 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 5/135 (3%)

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML---LDGIFPDVFTYN 475
           +A  + D +L  G  ++++  N   LA+    S   A S    M     D + PD+ TY 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNR-ALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE-VFAKIQT 534
           +LIG  C  G + L       ++++G   D I +T L+KG CA     +A + V  ++  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 535 LGLAIDHIPFRILKK 549
           LG   +   + IL K
Sbjct: 152 LGCIPNVFSYNILLK 166


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 196/392 (50%), Gaps = 3/392 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  GK+  A      M   G  P+++T+N +V+  C  G +E AD ++  M   +
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY + I+G C+   L++A  +F  M   G+RP+ V +N L+   C KG L  A 
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS 346

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            +  E+L        S   T   L+ + F      +A  +  ++ +K I  D + YN+LI
Sbjct: 347 AYKDEMLKKGISPTMS---TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILI 403

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG+C   +   AF    +ML  G  P   TY +LL+ L K+ ++ EA   +  ++  GV 
Sbjct: 404 NGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVL 463

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD I +  +I G C + ++  A E L  M    V P+   +N I+ G+ R G +  A  +
Sbjct: 464 PDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAREL 523

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M   G+  +  +FN LI   +R G I DAF ++ EML  G  P V TYN L+   C 
Sbjct: 524 FDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCK 583

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
                LA +L  EM+ +G+TPD  TY  LI+G
Sbjct: 584 NQEGDLAEELLKEMVSKGMTPDDTTYFTLIEG 615



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 213/416 (51%), Gaps = 9/416 (2%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           +YL+   C +   ++A      M E    P   T N+ ++ + ++N  + A  L++ M  
Sbjct: 155 DYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFR 214

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
             I+ +  T NI+++ LCK+G L  A  F+G +   +      +++T   ++  Y  +G 
Sbjct: 215 LRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHM---ETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
              A A+   M ++ I+ D   Y  LI+G C  G +  A   F +M+++G  P  + YNT
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L++  C +G LD AS +   + K G++P   +Y ++I  L +     +A   +  + EK 
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           + P+   +N++I+GY RC +   AF + D ML+ G+     T+ +L+   ++   + +A 
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L K++  +G+ PDV  +N LI   C+  ++  A +L  +M R  + PD +T+  +++GH
Sbjct: 452 DLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           C  G ++EA E+F +++  G+  DHI F  L   Y R        DI   + +RN+
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRG------DIKDAFRVRNE 561



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 11/142 (7%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L +++DR+K      P   T  T  + H       C  GK+  A  L  +M ++G  PD 
Sbjct: 488 LLKDMDRMKV----PPDEVTFNTIMQGH-------CREGKVEEARELFDEMKRRGIKPDH 536

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           ++ N L++   + GD++ A  V  EM +   +P   TYNA + G C+  E D A  L   
Sbjct: 537 ISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKE 596

Query: 214 MANNGIRPNRVTHNILVHALCK 235
           M + G+ P+  T+  L+  + K
Sbjct: 597 MVSKGMTPDDTTYFTLIEGIAK 618



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I  A  +R +M+  G  P VLT+N LV  LCK  + + A+ +++EM     +P+  TY
Sbjct: 550 GDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTY 609

Query: 192 NAFITGYCRVNELDK 206
              I G  +VN  D+
Sbjct: 610 FTLIEGIAKVNIPDE 624


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 208/410 (50%), Gaps = 9/410 (2%)

Query: 120 RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
           RH   +R L   G++         M  KG  PDV+    L+ E CKIG  + A  ++  +
Sbjct: 84  RH---LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGIL 140

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
            E     +  +YN  I+GYC+  E+++AL +   M   G+ PN  T++ ++ +LC +G L
Sbjct: 141 EESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKL 197

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
             A++ LG  L     K   DV+T T+L+D+  K     QA+ L+N+M  K  + D+V Y
Sbjct: 198 KQAMQVLGRQL---QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTY 254

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           NVLI GFC  G +  A  +  ++   G  PDVI++N +L  LC  G+  +A      + +
Sbjct: 255 NVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLR 314

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G  P  +++  +I  LC  G + KA   L  M +    P    +N +I G+     +  
Sbjct: 315 KGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDR 374

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A    ++M+S G   ++ T+N L+ A  + G + DA  +  ++   G  P + +YN +I 
Sbjct: 375 AIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVID 434

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
               +G   LA++L +EM  +G+ PD+IT T ++ G    G ++EA + F
Sbjct: 435 GLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFF 484



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 203/450 (45%), Gaps = 41/450 (9%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+IR+ C  G+   A  +   + + G V DV ++N L++  CK G++E+A   +R +  M
Sbjct: 119 ALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEA---LRVLDRM 175

Query: 183 RPSPNCATYNA-----------------------------------FITGYCRVNELDKA 207
             SPN ATY+A                                    I   C+ + + +A
Sbjct: 176 GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQA 235

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + LF+ M N G +P+ VT+N+L+   CK G L +A++FL ++ +        DVI+  ++
Sbjct: 236 MKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG---CQPDVISHNMI 292

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           + S    G    A+ L   M +K     +V +N+LIN  C  G +  A      M K G 
Sbjct: 293 LRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGH 352

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+  ++N L+   C    +D A  +  ++   G  PD ++Y  ++  LC  G +  A  
Sbjct: 353 TPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVV 412

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L  +  K   P    +N +IDG  + G    A  + + M   G+  ++ T  +++   +
Sbjct: 413 ILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLS 472

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           R G + +A      +    I P+ F YN +I   C      LA+    +M+ +G  P   
Sbjct: 473 REGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEA 532

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           TYT LIKG    G  ++A ++  ++ + GL
Sbjct: 533 TYTTLIKGITYEGLAEDASKLSNELYSRGL 562



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 136/266 (51%), Gaps = 3/266 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   H  ++R LC GG+   A+ L   M++KG +P V+T N L+N LC+ G L KA +
Sbjct: 283 QPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALN 342

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+  M +   +PN  ++N  I G+C    +D+A+     M + G  P+ VT+NIL+ ALC
Sbjct: 343 VLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALC 402

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K G + DAV  L ++ +      +  +I+   ++D   K G    A+ L  +M  K ++ 
Sbjct: 403 KDGKVDDAVVILSQLSSKG---CSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKP 459

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D++    ++ G    G +  A  +F  + +    P+   YN+++  LCK  +   A  F 
Sbjct: 460 DLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFL 519

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHG 380
             +   G  P + +Y T+I+G+   G
Sbjct: 520 ADMVAKGCKPTEATYTTLIKGITYEG 545



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 138/289 (47%), Gaps = 3/289 (1%)

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            +NG+  +       M  K    D++A   LI  FC  G   +A      + + G + DV
Sbjct: 90  IRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDV 149

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            +YN L++  CK G+++EA     VL + GV+P+  +Y  ++  LC  G + +A + L  
Sbjct: 150 TSYNVLISGYCKSGEIEEALR---VLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGR 206

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
            L+    P+     V+ID   +   +  A  + + M + G   +V T+N LI    +GG 
Sbjct: 207 QLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGR 266

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + +A    K++   G  PDV ++N+++ + C+ G    A++L   MLR+G  P ++T+  
Sbjct: 267 LDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNI 326

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           LI   C +G + +A  V   +   G   +   F  L + +   K  D+A
Sbjct: 327 LINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRA 375


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 217/418 (51%), Gaps = 6/418 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  L L  K   A+ L  +M+Q+G  PD++T+  +VN LCK GD++ A +++ +M   
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA 252

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R   N   +N  I   C+   ++ A+ LF+ M   GIRPN VT+N L++ LC  G   DA
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L  +L   + K   +V+T   L+D++FK G   +A  L  +M Q++I  D + YN+L
Sbjct: 313 SRLLSNML---EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLL 369

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           INGFC++  +  A   F  M+ +  LP++ TYNTL+N  CK  ++++    +  +S+ G+
Sbjct: 370 INGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             + ++Y TIIQG    GD   A+     M+   V  +   +++++ G    G L  A  
Sbjct: 430 VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALV 489

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I   +    +  N+F +N +I    + G + +A+ L   +    I PDV TYN +I   C
Sbjct: 490 IFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLC 546

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           +   +  A  L+ +M   G  P+  TY  LI+ +    +   + E+  ++++ G   D
Sbjct: 547 SKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGD 604



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 225/453 (49%), Gaps = 19/453 (4%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +   I   C   ++  AL +  KM++ G  PD++T + L+N  C    +  A  ++
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M EM   P+  T+   I G    N+  +A+ L   M   G +P+ VT+  +V+ LCK+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G +  A+  L ++ A    +  ++V+    ++DS  K      A+ L+ +M  K I+ ++
Sbjct: 237 GDIDLALNLLNKMEA---ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YN LIN  C  G  S A      ML++   P+V+T+N L++   K+GKL EA   +  
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + +  + PD I+Y  +I G C+H  + +A++    M+ K  +P    +N +I+G+ +C  
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           + +   +   M   G+  N  T+  +I    + G    A  + K+M+ + +  D+ TY++
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L+   C+ G +  AL ++  + +  +  +I  Y  +I+G C  G + EA ++F    +L 
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFC---SLS 530

Query: 537 LAIDHIPF----------RILKKR---YRRMKE 556
           +  D + +          R+L++    +R+MKE
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 204/415 (49%), Gaps = 3/415 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K+  A+ L   M++    P ++  N L++ + K+   E    +  +M  +  S +  TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
            FI  +CR ++L  AL + + M   G  P+ VT + L++  C    + DAV  + +++  
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV-- 180

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
            +     D  T T L+   F +    +A+AL + M Q+  Q D+V Y  ++NG C  GDI
Sbjct: 181 -EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A     +M       +V+ +NT+++ LCK   ++ A   +  +   G+ P+ ++Y ++
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I  LC +G    A   L +MLEK + P    +N +ID + + G L  A  + + M+   +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +  T+N LI        + +A  + K M+     P++ TYN LI   C    +   ++
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           L+ EM +RG+  + +TYT +I+G    G+   A+ VF ++ +  +  D + + IL
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 211/437 (48%), Gaps = 14/437 (3%)

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
           G+  W R      G   ++L      N L  I  ++ A  +  +M + RP P+   +N  
Sbjct: 35  GSGCWERSFASASGDYREILR-----NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKL 89

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           ++   ++N+ +  + L   M   GI  +  T++I ++  C++  L  A+  L +++    
Sbjct: 90  LSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK--- 146

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
                D++T + L++ Y  +     A+AL + M +   + D   +  LI+G  L+   S 
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A A   QM++RG  PD++TY T++N LCK+G +D A +    +    +  + + + TII 
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID---GYGRCGDLSNAFSIRDLMLSFG 431
            LC +  +  A +    M  K + P    +N +I+    YGR  D S   S    ML   
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN---MLEKK 323

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           ++ NV TFNALI A  + G + +A  L +EM+   I PD  TYNLLI   C    +  A 
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           Q++  M+ +   P+I TY  LI G C    +++  E+F ++   GL  + + +  + + +
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443

Query: 552 RRMKESDKARDIHQKWL 568
            +  + D A+ + ++ +
Sbjct: 444 FQAGDCDSAQMVFKQMV 460



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 146/336 (43%), Gaps = 49/336 (14%)

Query: 82  NPQAV-FNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
           NP  V FNAL D   KE  L   + + +    R +++ D   +  +I   C+  ++  A 
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SIDPDTITYNLLINGFCMHNRLDEAK 383

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            + + M+ K  +P++ T+N L+N  CK   +E    + REMS+     N  TY   I G+
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            +  + D A  +F  M +N +  + +T++IL+H LC  G L                   
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD------------------ 485

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
                                AL ++  + +  ++ +I  YN +I G C  G +  A+  
Sbjct: 486 --------------------TALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           FC +      PDV+TYNT+++ LC +  L EA   +  + + G  P+  +Y T+I+    
Sbjct: 526 FCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLR 582

Query: 379 HGDIVKAREFLLSMLEKSVVPEPH----IWNVIIDG 410
             D   + E +  M     V +      + N++ DG
Sbjct: 583 DCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDG 618



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 131/292 (44%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A+ L+ DM +      IV +N L++            +   QM   G   D+ TY+  +N
Sbjct: 67  AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           C C++ +L  A      + K G  PD ++  +++ G C    I  A   +  M+E    P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   +  +I G       S A ++ D M+  G   ++ T+  ++    + G I  A +L 
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            +M    I  +V  +N +I + C   H+ +A+ L+ EM  +GI P+++TY  LI   C  
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           G   +A  + + +    +  + + F  L   + +  +  +A  +H++ + R+
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 207/421 (49%), Gaps = 9/421 (2%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHVIREMSEMRPSPN 187
           C  G +  AL L  +M   G  PD  TH  ++  +   GDL+ A DH    +  M   PN
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDH----LRSMGCDPN 56

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY A I  + R  +L++A+ L   M   G  PN VT+N+LV ALCK  ++G A   + 
Sbjct: 57  VVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 116

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           +++   +G    +V+T   L+D + K G+   A  L   M  K ++ ++V Y+ LI+G C
Sbjct: 117 KMI---EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLC 173

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            +     A     +M   G  PD  TY+ L++ LCK  K++EA      ++ +G  PD +
Sbjct: 174 KSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVV 233

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            Y +II   C  G +++A++ L  M ++   P+   +N +IDG  + G ++ A  I D M
Sbjct: 234 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQM 293

Query: 428 LSFG-VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
              G V  +V T++ +I    +   + +A  L   M   G  PDV TY  +I   C  G 
Sbjct: 294 QESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 353

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A  L   M R G  P+++TYT LI G C    + EAE V  +++  G   + + +  
Sbjct: 354 LEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 413

Query: 547 L 547
           +
Sbjct: 414 M 414



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 211/415 (50%), Gaps = 6/415 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I       K+  A+ L  +M ++G  P+++T+N LV+ LCK+  +  A  V+++M 
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   +PN  T+N+ + G+C+   +D A  L   M   G+RPN VT++ L+  LCK     
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A + L E+ A      T D  T + L+    K     +A  +   M       D+V Y+
Sbjct: 180 EAKEVLEEMKASG---VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 236

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I+ FC +G +  A     +M K+   PDV+TYNT+++ LCK GK+ EA      + ++
Sbjct: 237 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES 296

Query: 361 G-VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
           G V PD ++Y T+I GLC    +V+A++ L  M +    P+   +  IIDG  +CG L  
Sbjct: 297 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEE 356

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +   M   G + NV T+  LI    +   + +A  + +EM   G  P++ TYN ++ 
Sbjct: 357 AEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVN 416

Query: 480 ASCNLGHIHLALQLYDEML--RRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
             C  G I  A QL   M   R   +PD  TY  ++    +   ++EAE++  ++
Sbjct: 417 GLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 5/187 (2%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  M+++G V      D   +  VI  LC    +  A  L  +M + G  PDV+T+  ++
Sbjct: 290 LDQMQESGDVL----PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTII 345

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           + LCK G LE+A+++++ M     +PN  TY   I+G C+  ++D+A  +   M N G  
Sbjct: 346 DGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCP 405

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           PN VT+N +V+ LC  G + +A + + + + D   + + D  T   ++++   +    +A
Sbjct: 406 PNLVTYNTMVNGLCVSGRIKEAQQLV-QRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 464

Query: 281 LALWNDM 287
             L   M
Sbjct: 465 EQLLEQM 471



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +  A  L +EM   G  PD FT+  +I A  N G +  A+   D +   G  P+++T
Sbjct: 3   AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVT 59

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           YT LI        ++EA ++  +++  G   + + + +L     ++     A+D+ +K +
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 205/401 (51%), Gaps = 4/401 (0%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           IR LC  G++  A+ L   M +   VPDV+T+N L+  LCK    ++A H +R M     
Sbjct: 229 IRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+  TYN  I GYC+++ + +A  L       G  P++VT+  L++ LC +G +  A++
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 347

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              E  A        D++    L+      G    AL + N+M ++    DI  YN++IN
Sbjct: 348 LFNEAQAKG---IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 404

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G+IS A       + +G+LPDV T+NTL++  CK+ KLD A      + + G+AP
Sbjct: 405 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 464

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D I+Y +++ GLC  G + +  E    M+ K   P P  +N++I+ + R   +  A  + 
Sbjct: 465 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 524

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
             M   G+  +  +FN LI    R G +  A+ L +++   G      T+N LIGA    
Sbjct: 525 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 584

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            ++H+A +++DEML +G   D  TY  LI G C   N+  A
Sbjct: 585 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRA 625



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 204/390 (52%), Gaps = 3/390 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR LC       A+   R+M+ +G +PD  T+N +++  CKI  +++A  ++++     
Sbjct: 262 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 321

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY + I G C   ++++AL LF+     GI+P+ V +N LV  LC +GL+  A+
Sbjct: 322 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 381

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + + E+  +       D+ T  I+++   K G+   A  + ND   K    D+  +N LI
Sbjct: 382 QVMNEMAEEG---CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 438

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+C    + SA     +M + G  PD ITYN++LN LCK GK++E +  +  +   G  
Sbjct: 439 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH 498

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ I+Y  +I+  C    + +A + ++ M ++ + P+   +N +I G+ R GDL  A+ +
Sbjct: 499 PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLL 558

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              +   G S+   TFN LI A +   ++  A  +  EML  G   D +TY +LI  SC 
Sbjct: 559 FQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCK 618

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELI 513
             ++  A     EM+++G  P + T+  +I
Sbjct: 619 TANVDRAYMHLVEMIKKGFIPSMSTFGRVI 648



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 213/453 (47%), Gaps = 8/453 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   H   +R  CL  +   AL L R +  +G V     +  +V  L   G    A 
Sbjct: 117 VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV----AYCTVVCGLYAHGHTHDAR 172

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  +M      PN A +N  +   C+  ++ +A  L   +   G+  N  T+NI +  L
Sbjct: 173 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 232

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C+ G L +AV+ +  + A     A  DV+T   L+    K     +A+     M  +   
Sbjct: 233 CEAGRLPEAVRLVDGMRA----YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 288

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D   YN +I+G+C    +  A       + +GF+PD +TY +L+N LC +G ++ A   
Sbjct: 289 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 348

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +      G+ PD + Y ++++GLC+ G I+ A + +  M E+   P+   +N++I+G  +
Sbjct: 349 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 408

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G++S+A  + +  +  G   +VFTFN LI    +   +  A  L + M   GI PD  T
Sbjct: 409 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 468

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN ++   C  G ++   + + EM+ +G  P+ ITY  LI+  C    M+EA +V  K+ 
Sbjct: 469 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 528

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             GL  D + F  L   + R  + + A  + QK
Sbjct: 529 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 561



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 211/427 (49%), Gaps = 4/427 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  V+  L   G    A  L  +M+     P++   N +++ LCK GD+ +A  ++ ++ 
Sbjct: 155 YCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVI 214

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   S N  TYN +I G C    L +A+ L   M    + P+ VT+N L+  LCKK +  
Sbjct: 215 QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQ 273

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+ +L  ++  + G    D   +TI+ D Y K     +A  L  D   K    D V Y 
Sbjct: 274 EAMHYLRRMM--NQGCLPDDFTYNTII-DGYCKISMVQEATELLKDAVFKGFVPDQVTYC 330

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LING C  GD+  A   F +   +G  PD++ YN+L+  LC QG +  A      +++ 
Sbjct: 331 SLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEE 390

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  PD  +Y  +I GLC  G+I  A   +   + K  +P+   +N +IDGY +   L +A
Sbjct: 391 GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSA 450

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + M  +G++ +  T+N+++    + G + +     +EM+L G  P+  TYN+LI  
Sbjct: 451 LQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIEN 510

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    +  A ++  +M + G+ PD +++  LI G C  G+++ A  +F K++  G +  
Sbjct: 511 FCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSAT 570

Query: 541 HIPFRIL 547
              F  L
Sbjct: 571 ADTFNTL 577



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 198/413 (47%), Gaps = 8/413 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E +  L+ M + G     L  D+  +  +I   C    +  A  L +  + KG VPD +
Sbjct: 273 QEAMHYLRRMMNQG----CLPDDFTYNT-IIDGYCKISMVQEATELLKDAVFKGFVPDQV 327

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  L+N LC  GD+E+A  +  E       P+   YN+ + G C    +  AL + + M
Sbjct: 328 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 387

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
           A  G  P+  T+NI+++ LCK G + DA   + + +         DV T   L+D Y K 
Sbjct: 388 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG---YLPDVFTFNTLIDGYCKR 444

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
                AL L   M++  I  D + YN ++NG C  G ++     F +M+ +G  P+ ITY
Sbjct: 445 LKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITY 504

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N L+   C+  K++EAS     +S+ G+ PD +S+ T+I G C +GD+  A      + E
Sbjct: 505 NILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 564

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K        +N +I  +    ++  A  I D MLS G  ++ +T+  LI    +  ++  
Sbjct: 565 KGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDR 624

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           A+    EM+  G  P + T+  +I +      +  A+ +   M++ G+ P+++
Sbjct: 625 AYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 677



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 183/429 (42%), Gaps = 45/429 (10%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+  G  PD+ TH   +   C    L    H+   +    P      Y   + G     
Sbjct: 111 RMLAAGVSPDLHTHTIRLRSFC----LTARPHIALRLLRALPHRGAVAYCTVVCGLYAHG 166

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
               A  LF  M +  + PN    N ++HALCK+G                         
Sbjct: 167 HTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRG------------------------- 201

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
                        D  +A  L   + Q+ +  ++  YN+ I G C  G +  A      M
Sbjct: 202 -------------DVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM 248

Query: 323 LKRGF-LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
             R + +PDV+TYNTL+  LCK+    EA H+   +   G  PD  +Y TII G C    
Sbjct: 249 --RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 306

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + +A E L   + K  VP+   +  +I+G    GD+  A  + +   + G+  ++  +N+
Sbjct: 307 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 366

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           L+      G I  A  +  EM  +G  PD+ TYN++I   C +G+I  A  + ++ + +G
Sbjct: 367 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 426

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
             PD+ T+  LI G+C R  +  A ++  ++   G+A D I +  +     +  + ++  
Sbjct: 427 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 486

Query: 562 DIHQKWLLR 570
           +  Q+ +L+
Sbjct: 487 ETFQEMILK 495


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/434 (30%), Positives = 219/434 (50%), Gaps = 4/434 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++   C  G +  A  + +KM ++  +P+V+T + ++N   K G L KA  V+R+M 
Sbjct: 379 YTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMV 438

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +M   PN   Y   + GY R  + + A   +  M + G+  N +  +IL++ L + G + 
Sbjct: 439 QMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMK 498

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A   + ++L+        DV   + LMD YFK G++  AL++  +M +K++Q D+VAYN
Sbjct: 499 EAQSLIKDILSKG---IYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYN 555

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L  G    G      + F +M++ G  PD +TYN+++N    QGK + A      +   
Sbjct: 556 ALTKGLLRLGKYEPK-SVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSY 614

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GV P+ ++Y  +I GLC  G I K    L  ML    VP P I   ++  Y R       
Sbjct: 615 GVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAI 674

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             I   ++  G++ N   +N LI    R G    A  +  EM++ GI  D+ TYN LI  
Sbjct: 675 LQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRG 734

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C   H+  A   Y +ML  GI+P+I TY  L++G    G M++A+++ ++++  GL  +
Sbjct: 735 YCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPN 794

Query: 541 HIPFRILKKRYRRM 554
              + IL   + R+
Sbjct: 795 ATTYNILVSGHGRV 808



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 217/468 (46%), Gaps = 18/468 (3%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D+  +  V+   C  G       L  +M++KG   D +T N LV   C+IG ++ A+ ++
Sbjct: 74  DHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIM 133

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             +       +    N  + GYC V  + +AL L      NG++P+ VT+N LV+A CK+
Sbjct: 134 GNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKR 193

Query: 237 GLLGDAVKFLGEVLA---DDDGKATSD---------------VITSTILMDSYFKNGDKF 278
           G L  A   + E+L    DD+    +D               V+T T L+ +Y K+    
Sbjct: 194 GDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGID 253

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
              +L+  M    +  D+V  + ++ G C +G ++ A     +M   G  P+ ++Y T++
Sbjct: 254 DFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTII 313

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           + L K G++ EA +    +   G++ D +   T++ GL   G   +A E   ++L+ ++V
Sbjct: 314 SALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLV 373

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P    +  ++DG+ + GD+  A ++   M    V  NV TF+++I    + G +  A  +
Sbjct: 374 PNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEV 433

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            ++M+   I P+VF Y +L+      G    A   Y EM   G+  + I +  L+     
Sbjct: 434 LRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKR 493

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            G MKEA+ +   I + G+ +D   +  L   Y +      A  + Q+
Sbjct: 494 SGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQE 541



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 128/526 (24%), Positives = 225/526 (42%), Gaps = 89/526 (16%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP---- 184
           C  G +  AL L     + G  PD++T+N LVN  CK GDL KA+ V+ E+   R     
Sbjct: 156 CEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDES 215

Query: 185 -----------------SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
                             P   T+   I  YC+   +D    L+  M  +G+ P+ VT +
Sbjct: 216 GVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCS 275

Query: 228 ILVHALCKKGLLGDAVKFL-------------------------GEVLADDDGKA----- 257
            +++ LC+ G L +A   L                         G V+   + ++     
Sbjct: 276 SILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVR 335

Query: 258 --TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
             + D++  T +MD  FK G   +A  ++  + + N+  + V Y  L++G C  GD+  A
Sbjct: 336 GISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFA 395

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE-------------------------- 349
                +M K   LP+V+T+++++N   K+G L++                          
Sbjct: 396 ETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDG 455

Query: 350 ---------ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
                    A+ FY  +   G+  + I +  ++  L   G + +A+  +  +L K +  +
Sbjct: 456 YFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLD 515

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              ++ ++DGY + G+ S A S+   M    +  +V  +NAL     R G  ++  S+  
Sbjct: 516 VFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGK-YEPKSVFS 574

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            M+  G+ PD  TYN ++      G    AL L +EM   G+ P+++TY  LI G C  G
Sbjct: 575 RMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTG 634

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            +++   V  ++  +G     I  + L K Y R +++D    IH+K
Sbjct: 635 AIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKK 680



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 194/413 (46%), Gaps = 16/413 (3%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G    AL + ++M +K    DV+ +N L   L ++G  E    V   M E+  +P+C TY
Sbjct: 530 GNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYE-PKSVFSRMIELGLTPDCVTY 588

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N+ +  Y    + + AL L + M + G+ PN VT+NIL+  LCK G +   +  L E+LA
Sbjct: 589 NSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLA 648

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
              G   + +I    L+ +Y ++      L +   +    +  + + YN LI   C  G 
Sbjct: 649 V--GYVPTPII-HKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGM 705

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A     +M+ +G   D++TYN L+   C    +++A + Y  +  +G++P+  +Y  
Sbjct: 706 TKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNA 765

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +++GL  +G +  A + +  M E+ +VP    +N+++ G+GR G+  ++  +   M++ G
Sbjct: 766 LLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKG 825

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC--------- 482
                 T+N LI    + G +  A  L  EML  G  P+  TY++LI   C         
Sbjct: 826 FIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMD 885

Query: 483 ---NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
               L + + A +L  EM  +G  P   T   +     A G   +A+ +   +
Sbjct: 886 RLLKLSYQNEAKKLLREMCEKGHVPSESTLMYISSNFSAPGKRDDAKRLLKTV 938



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 187/413 (45%), Gaps = 39/413 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++ +L   G +  A  L + ++ KG   DV  ++ L++   K G+   A  V++EM+E  
Sbjct: 487 LLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKD 546

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +   YNA   G  R+ + +    +FS M   G+ P+ VT+N +              
Sbjct: 547 MQFDVVAYNALTKGLLRLGKYEPK-SVFSRMIELGLTPDCVTYNSV-------------- 591

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
                                   M++YF  G    AL L N+M    +  ++V YN+LI
Sbjct: 592 ------------------------MNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILI 627

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C  G I    +   +ML  G++P  I +  LL    +  K D     +  L   G+ 
Sbjct: 628 GGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLN 687

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            +Q+ Y T+I  LC  G   KA   L  M+ K +  +   +N +I GY     +  AF+ 
Sbjct: 688 LNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNT 747

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              ML  G+S N+ T+NAL+   +  G + DA  L  EM   G+ P+  TYN+L+     
Sbjct: 748 YSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGR 807

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +G+   +++LY EM+ +G  P   TY  LI+ +   G M++A E+  ++ T G
Sbjct: 808 VGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRG 860



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 223/484 (46%), Gaps = 62/484 (12%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA---------DHVIRE------------ 178
           L  +M+  G VP+V + N LV+ LCK+GDL  A         DHV               
Sbjct: 32  LYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYLRNSVFDHVTYNTVVWGFCKRGLA 91

Query: 179 ------MSEMRPSPNC---ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
                 +SEM     C    T N  + GYC++  +  A  +   +   G+  + +  N L
Sbjct: 92  DQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTL 151

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGK--ATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           V   C+ GL+  A+      L +D  K     D++T   L++++ K GD  +A ++ N++
Sbjct: 152 VDGYCEVGLVSRALD-----LVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEI 206

Query: 288 FQ---------------------KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
                                  +++Q  +V +  LI  +C +  I   F+ + QM+  G
Sbjct: 207 LGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSG 266

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            +PDV+T +++L  LC+ GKL EA+     +   G+ P+ +SY TII  L   G +++A 
Sbjct: 267 VMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAF 326

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
                M+ + +  +  +   ++DG  + G    A  +   +L   +  N  T+ AL+   
Sbjct: 327 NHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGH 386

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G +  A ++ ++M  + + P+V T++ +I      G ++ A+++  +M++  I P++
Sbjct: 387 CKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNV 446

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR---MKESDK-ARD 562
             Y  L+ G+   G  + A   + ++++ GL  ++I F IL    +R   MKE+    +D
Sbjct: 447 FVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKD 506

Query: 563 IHQK 566
           I  K
Sbjct: 507 ILSK 510



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 1/168 (0%)

Query: 84  QAVFNALDLIL-KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRR 142
           Q V+N L  +L +  + +   +  T  V   +  D   + A+IR  C G  +  A     
Sbjct: 690 QMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYS 749

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+  G  P++ T+N L+  L   G +  AD ++ EM E    PN  TYN  ++G+ RV 
Sbjct: 750 QMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVG 809

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
               ++ L+  M   G  P   T+N+L+    K G +  A + L E+L
Sbjct: 810 NKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEML 857



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 5/168 (2%)

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
           S+VP   +WN ++  +   G +S    +   M+  GV  NVF+ N L+ +  + G +  A
Sbjct: 5   SLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLA 64

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
               +  + D +     TYN ++   C  G       L  EM+++G+  D +T   L+KG
Sbjct: 65  LGYLRNSVFDHV-----TYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKG 119

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           +C  G ++ AE +   +   G+ +D I    L   Y  +    +A D+
Sbjct: 120 YCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDL 167



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 55/113 (48%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  L   G +  A  L  +M ++G VP+  T+N LV+   ++G+   +  +  EM   
Sbjct: 765 ALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITK 824

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
              P   TYN  I  Y +  ++ +A  L + M   G  PN  T+++L+   CK
Sbjct: 825 GFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCK 877


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 219/412 (53%), Gaps = 3/412 (0%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           TA+ L ++M  KG  PD+ T N L+N  C +G +  +  V+ ++ ++   PN  T N  +
Sbjct: 28  TAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLM 87

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   E+ K+LH    +   G + ++V++  L++ LCK G    A+K L  +   +D 
Sbjct: 88  KGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMI---EDR 144

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               +V+    ++D   K+    +A  L+++M  + I  +++ Y+ LI GFCL G +  A
Sbjct: 145 STRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEA 204

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           F    +M+ +   P+V TY  L++ LCK+GK+ EA +   V++K GV P+ +SY T++ G
Sbjct: 205 FGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDG 264

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C+ G++  A++   +M++K V P  + +N++ID   +   +  A ++   +L   +  N
Sbjct: 265 YCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPN 324

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             T+++LI    + G I  A  L KEM   G   DV TY  L+ A C   ++  A  L+ 
Sbjct: 325 TVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFM 384

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +M  RGI P+  TYT LI G C  G  K A+++F  +   G  I+   + ++
Sbjct: 385 KMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVM 436



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 214/449 (47%), Gaps = 38/449 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +++ LCL G++  +L    K++ +G   D +++  L+N LCKIG+   A  ++R + + 
Sbjct: 85  TLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDR 144

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   YN  I G C+   +++A  L+S M   GI PN +T++ L++  C  G L   
Sbjct: 145 STRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQL--- 201

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                               +A  L N+M  KNI  ++  Y +L
Sbjct: 202 -----------------------------------MEAFGLLNEMILKNINPNVYTYTIL 226

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++  C  G +  A      M K G  P+V++YNTL++  C  G++  A   +  + + GV
Sbjct: 227 MDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGV 286

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+  SY  +I  LC    + +A   L  +L K++VP    ++ +IDG+ + G +++A  
Sbjct: 287 NPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALD 346

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M   G  ++V T+ +L+ A  +  ++  A +L  +M   GI P+ +TY  LI   C
Sbjct: 347 LLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLC 406

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G    A +L+  +L +G   ++ TY  +I G C  G + EA  + +K++  G   D +
Sbjct: 407 KGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAV 466

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLRN 571
            F I+ +      ++DKA  +  + + ++
Sbjct: 467 TFEIIIRSLFEKDQNDKAEKLLHEMIAKD 495



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 207/420 (49%), Gaps = 3/420 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P ++  N +V  L K+     A  + ++M      P+  T N  I  +C + ++  +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              +   G +PN +T N L+  LC KG +  ++ F  +V+A        D ++   L++ 
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQG---FQMDQVSYATLLNG 124

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K G+   AL L   +  ++ + ++V YN +I+G C +  ++ A+  + +M  RG  P+
Sbjct: 125 LCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPN 184

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           VITY+TL+   C  G+L EA      +    + P+  +Y  ++  LC  G + +A+  L 
Sbjct: 185 VITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLA 244

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M ++ V P    +N ++DGY   G++ NA  +   M+  GV+ NV+++N +I    +  
Sbjct: 245 VMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSK 304

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A +L +E+L   + P+  TY+ LI   C LG I  AL L  EM  RG   D++TYT
Sbjct: 305 RVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYT 364

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            L+   C   N+ +A  +F K++  G+  +   +  L     +      A+ + Q  L++
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVK 424



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 164/292 (56%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A++L+  M  K I+ D+   N+LIN FC  G ++ +F    ++LK G+ P+ IT NTL+ 
Sbjct: 29  AISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMK 88

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LC +G++ ++ HF+  +   G   DQ+SY T++ GLC  G+   A + L  + ++S  P
Sbjct: 89  GLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRP 148

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
              ++N IIDG  +   ++ A+ +   M + G+  NV T++ LI      G + +AF L 
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLL 208

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            EM+L  I P+V+TY +L+ A C  G +  A  L   M + G+ P++++Y  L+ G+C  
Sbjct: 209 NEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLI 268

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           G ++ A+++F  +   G+  +   + I+  R  + K  D+A ++ ++ L +N
Sbjct: 269 GEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKN 320



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 155/310 (50%), Gaps = 32/310 (10%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I   CL G++  A  L  +MI K   P+V T+  L++ LCK G +++A +++  M+
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  +YN  + GYC + E+  A  +F TM   G+ PN  ++NI++  LCK   + 
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 241 DAVKFLGEVLADDD-----------------GKATS---------------DVITSTILM 268
           +A+  L EVL  +                  G+ TS               DV+T T L+
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           D+  KN +  +A AL+  M ++ IQ +   Y  LI+G C  G   +A   F  +L +G  
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
            +V TYN +++ LCK+G LDEA      + + G  PD ++++ II+ L       KA + 
Sbjct: 428 INVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKL 487

Query: 389 LLSMLEKSVV 398
           L  M+ K ++
Sbjct: 488 LHEMIAKDLL 497



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 46/105 (43%)

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           MLL    P +  +N ++G+   + H   A+ L+ +M  +GI PD+ T   LI   C  G 
Sbjct: 1   MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           M  +  V  KI  LG   + I    L K      E  K+   H K
Sbjct: 61  MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDK 105


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 212/415 (51%), Gaps = 9/415 (2%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   +  V+  LC  GK   A  +  KMI+K   PDV+T+N L++  CK+  +++A+ 
Sbjct: 229 EPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAER 288

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++ +M   R +P   TY   I G+ R + L  A  +   M   GI P+ VT+N L+  LC
Sbjct: 289 LLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLC 348

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K G L +A + L EV+ + D     DV+T +IL++   K G    A  L   M ++  Q 
Sbjct: 349 KAGKLEEAHELL-EVMVEKD--CAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQP 405

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++V +N +I+GFC  G +         M +    PDV+TY+TL++  CK  ++ +A   +
Sbjct: 406 NLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDA---F 462

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
            +L   G++PD+ SY ++++GLC  G + +A+E +  M ++   P    + +II G    
Sbjct: 463 AIL---GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDV 519

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
                A  +  +M   G   N++T++ LI    +   + DA ++   ML  G  PDV TY
Sbjct: 520 ERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATY 579

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
             LI   C +  +  A Q +  M   G  PD + Y  LI G C  GN+++A EV 
Sbjct: 580 TSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVM 634



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 208/412 (50%), Gaps = 12/412 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  GKI  A  + + M+++  VPDV+T+  L+   C+   L++A  ++ +M E  
Sbjct: 133 LIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESG 192

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+   YNA + G C+ N+L++   L   M   G  P+  ++N +V  LC+ G   +A 
Sbjct: 193 LTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAG 252

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L +++   + K   DV+T   LMD + K     +A  L  DM  +     ++ Y  LI
Sbjct: 253 KILEKMI---EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLI 309

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            GF     ++ A+     M K G  PD++TYN LL+ LCK GKL+EA     V+ +   A
Sbjct: 310 GGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCA 369

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y  ++ GLC  G +  AR  L  MLE+   P    +N +IDG+ + G +     +
Sbjct: 370 PDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKV 429

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            +LM     + +V T++ LI    +   + DAF++       GI PD  +Y+ ++   C+
Sbjct: 430 LELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCS 483

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            G +  A ++ D M ++G  P    Y  +I G C   +++  +E    +Q +
Sbjct: 484 TGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLC---DVERGDEALKMLQVM 532



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 232/483 (48%), Gaps = 22/483 (4%)

Query: 88  NALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           NALD    E    ++ M+++G     L  D   + A++  LC   ++     L  +M++ 
Sbjct: 176 NALD----EARKLMEKMKESG-----LTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEA 226

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  PD  ++N +V  LC+ G  E+A  ++ +M E +  P+  TYN+ + G+C+V+++D+A
Sbjct: 227 GREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEA 286

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M      P  +T+  L+    +   L DA + + ++        + D++T   L
Sbjct: 287 ERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFK---AGISPDLVTYNCL 343

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D   K G   +A  L   M +K+   D+V Y++L+NG C  G +  A      ML+RG 
Sbjct: 344 LDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGC 403

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+++T+NT+++  CK GK+DE      ++ +    PD ++Y T+I G C    +  A  
Sbjct: 404 QPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFA 463

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--LA 445
            L       + P+   ++ +++G    G +  A  + DLM   G       +  +I  L 
Sbjct: 464 IL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLC 517

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
           +   G   +A  + + M   G  P+++TY++LI   C    +  A+ + D ML +G  PD
Sbjct: 518 DVERGD--EALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPD 575

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           + TYT LI G C    M  A + F  ++  G   D + + IL   + +    +KA ++ Q
Sbjct: 576 VATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQ 635

Query: 566 KWL 568
             L
Sbjct: 636 LML 638



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 209/438 (47%), Gaps = 8/438 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I      G     L +  +M+ +   PDV+THN ++   C+IGDL++A    R   +M
Sbjct: 29  ALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFR--GKM 86

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SP   TY   I G C+   +D+A  L   M      P+   +N L+  LCK G +  A
Sbjct: 87  WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAA 146

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L  +L   +     DVIT T L+    +     +A  L   M +  +  D VAYN L
Sbjct: 147 RNVLKMML---ERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNAL 203

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +NG C    +        +M++ G  PD  +YNT++ CLC+ GK +EA      + +   
Sbjct: 204 LNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKC 263

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y +++ G C    + +A   L  M+ +   P    +  +I G+ R   L++A+ 
Sbjct: 264 GPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYR 323

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M   G+S ++ T+N L+    + G + +A  L + M+     PDV TY++L+   C
Sbjct: 324 VMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLC 383

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            LG +  A  L + ML RG  P+++T+  +I G C  G + E  +V   ++ +    D +
Sbjct: 384 KLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVV 443

Query: 543 PFRILKKRY---RRMKES 557
            +  L   Y    RM+++
Sbjct: 444 TYSTLIDGYCKANRMQDA 461



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 201/444 (45%), Gaps = 79/444 (17%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC   +I  A  L  +MIQK   PD   +N L+  LCK+G ++ A +V++ M 
Sbjct: 95  YCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMML 154

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    P+  TY + I G C+ N LD+A  L   M  +G+ P+ V +N L++ LCK+  L 
Sbjct: 155 ERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLE 214

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +  K L                                       +M +   + D  +YN
Sbjct: 215 EVSKLL--------------------------------------EEMVEAGREPDTFSYN 236

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF------- 353
            ++   C +G    A     +M+++   PDV+TYN+L++  CK  K+DEA          
Sbjct: 237 TVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGR 296

Query: 354 -------------------------YGVLS---KTGVAPDQISYKTIIQGLCIHGDIVKA 385
                                    Y V+    K G++PD ++Y  ++ GLC  G + +A
Sbjct: 297 RCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEA 356

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E L  M+EK   P+   ++++++G  + G + +A  + ++ML  G   N+ TFN +I  
Sbjct: 357 HELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDG 416

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G + +   + + M      PDV TY+ LI   C    +  A  +       GI+PD
Sbjct: 417 FCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPD 470

Query: 506 IITYTELIKGHCARGNMKEAEEVF 529
             +Y+ +++G C+ G ++EA+EV 
Sbjct: 471 KASYSSMLEGLCSTGKVEEAQEVM 494



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 196/422 (46%), Gaps = 5/422 (1%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R+     + P   T+  L+    + G+ +    +  EM   R SP+  T+N  +  YC++
Sbjct: 13  RERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQI 72

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            +LD+AL  F         P   T+ IL+H LC+   + +A + L E++  D      D 
Sbjct: 73  GDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKD---CHPDA 127

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
                L+    K G    A  +   M +++   D++ Y  LI G C    +  A     +
Sbjct: 128 AVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEK 187

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M + G  PD + YN LLN LCKQ +L+E S     + + G  PD  SY T++  LC  G 
Sbjct: 188 MKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGK 247

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
             +A + L  M+EK   P+   +N ++DG+ +   +  A  + + M+    +  V T+  
Sbjct: 248 YEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTT 307

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI   +R   + DA+ + ++M   GI PD+ TYN L+   C  G +  A +L + M+ + 
Sbjct: 308 LIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD 367

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
             PD++TY+ L+ G C  G + +A  +   +   G   + + F  +   + +  + D+  
Sbjct: 368 CAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGH 427

Query: 562 DI 563
            +
Sbjct: 428 KV 429



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 185/389 (47%), Gaps = 8/389 (2%)

Query: 184 PS-PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           PS P+ +TY A ITG+ R       L + + M      P+ +THN ++ A C+ G L  A
Sbjct: 19  PSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRA 78

Query: 243 VK-FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           +  F G++        +    T  IL+    +     +A  L ++M QK+   D   YN 
Sbjct: 79  LSHFRGKMWC------SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNC 132

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LI G C  G I +A      ML+R  +PDVITY +L+   C+   LDEA      + ++G
Sbjct: 133 LIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESG 192

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD ++Y  ++ GLC    + +  + L  M+E    P+   +N ++      G    A 
Sbjct: 193 LTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAG 252

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            I + M+      +V T+N+L+    +   + +A  L ++M+     P V TY  LIG  
Sbjct: 253 KILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGF 312

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
                +  A ++ ++M + GI+PD++TY  L+ G C  G ++EA E+   +     A D 
Sbjct: 313 SRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDV 372

Query: 542 IPFRILKKRYRRMKESDKARDIHQKWLLR 570
           + + IL     ++ + D AR + +  L R
Sbjct: 373 VTYSILVNGLCKLGKVDDARLLLEMMLER 401



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 155/334 (46%), Gaps = 32/334 (9%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D  + M D    +  +  D   +  ++  LC  GK+  A  L   M++K   PDV+T++ 
Sbjct: 320 DAYRVMEDM--FKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSI 377

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           LVN LCK+G ++ A  ++  M E    PN  T+N  I G+C+  ++D+   +   M    
Sbjct: 378 LVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVS 437

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK---------ATSDVITSTILMD 269
             P+ VT++ L+   CK   + DA   LG  ++ D            +T  V  +  +MD
Sbjct: 438 CTPDVVTYSTLIDGYCKANRMQDAFAILG--ISPDKASYSSMLEGLCSTGKVEEAQEVMD 495

Query: 270 SYFKNGDKF-------------------QALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
              K G                      +AL +   M ++  + ++  Y++LING C   
Sbjct: 496 LMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTK 555

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A      ML++G +PDV TY +L++  CK  K+D A   +  +  +G  PD+++Y 
Sbjct: 556 RVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYN 615

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
            +I G C  G++ KA E +  MLEK   P+   +
Sbjct: 616 ILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATY 649



 Score = 45.8 bits (107), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 38/73 (52%)

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            + +S  +E   D   P   TY  LI      G+  + L++ +EML R  +PD+IT+  +
Sbjct: 6   LEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTI 65

Query: 513 IKGHCARGNMKEA 525
           +K +C  G++  A
Sbjct: 66  LKAYCQIGDLDRA 78


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/436 (30%), Positives = 228/436 (52%), Gaps = 12/436 (2%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS---PNCATYNAFITGYCR 200
           M+Q G  P + T+N L++  CK G +++A  ++++M E R +   PN  TYN  I G  R
Sbjct: 220 MLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDM-EARAAGCLPNDVTYNVVINGLAR 278

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
             EL+KA  L   M  +  + +  T+N L+  L  +  +  A   L E+  +++G   + 
Sbjct: 279 KGELEKAAQLVDIMRLSK-KASAFTYNPLITGLLARDFVEKAGALLLEM--ENEGIVPT- 334

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           V+T   L+D  FK G+   A   +++M  K +  D++ YN LING+C  G++  A   F 
Sbjct: 335 VVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFG 394

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            + + G  P V+TYN L++  C+ G L+ A      +++    PD  +Y  ++ G C+  
Sbjct: 395 DLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVR 454

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
           ++   R F   ML K + P+   +N  I      G ++NAF +R+ M+  G+SS+  T+N
Sbjct: 455 NLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYN 514

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            LI    + GS+ DA+ L  +M+ DG+  D  TY  LI A C  G +  A  ++D M+  
Sbjct: 515 VLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVAS 574

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G++P ++TYT  I  +C RGN+  A   F K+   G+  + + + +L     RM  ++ A
Sbjct: 575 GLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESA 634

Query: 561 ----RDIHQKWLLRNK 572
                ++ ++ L+ NK
Sbjct: 635 YQHFHEMLERGLVPNK 650



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/416 (31%), Positives = 209/416 (50%), Gaps = 10/416 (2%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           ++M + G  P V   N ++  L      +    V  +M ++   P+  TYN  +  +C+ 
Sbjct: 183 QEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKA 242

Query: 202 NELDKALHLFSTMANN--GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
             +D+A+ L   M     G  PN VT+N++++ L +KG L  A + +  +       A +
Sbjct: 243 GRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKASAFT 302

Query: 260 --DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
              +IT  +  D   K G      AL  +M  + I   +V YN LI+G    G+  +A  
Sbjct: 303 YNPLITGLLARDFVEKAG------ALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQV 356

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            F +M  +G LPD+ITYN+L+N  CK G L +A   +G L + G+ P  ++Y  +I G C
Sbjct: 357 KFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYC 416

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             GD+  AR     M E+  +P+   + ++++G     +L+      D MLS G+  + F
Sbjct: 417 RLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCF 476

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            +N  I AE   G+I +AF L++EM+L GI  D  TYN+LI   C  G +  A  L+ +M
Sbjct: 477 AYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKM 536

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           +  G+  D +TYT LI  HC RG + EA+ +F  +   GL+   + + I    Y R
Sbjct: 537 VTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCR 592



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/390 (32%), Positives = 196/390 (50%), Gaps = 4/390 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M  +G VP V+T+N L++ L K G+ E A     EM      P+  TYN+ I GYC+  
Sbjct: 325 EMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAG 384

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            L +AL LF  +   G+ P  +T+NIL+   C+ G L  A +   E+  +D      DV 
Sbjct: 385 NLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEED---CLPDVC 441

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T TILM+      +       +++M  K ++ D  AYN  I+     G I++AF    +M
Sbjct: 442 TYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEM 501

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           + RG   D +TYN L++ LCK G L +A   +  +   G+  D ++Y  +I   C  G +
Sbjct: 502 MLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRL 561

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
           ++A+     M+   + P    + + I  Y R G+L  A+     ML  GV  N  T+N L
Sbjct: 562 IEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVL 621

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           + A  R G    A+    EML  G+ P+ +TY LLI  SC  G+   A++LY EM ++GI
Sbjct: 622 MHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGI 681

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            PD  T+  L KG    G+M +A +    +
Sbjct: 682 HPDHCTHNALFKGF-GEGHMYDAVQYLENV 710



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 215/464 (46%), Gaps = 39/464 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQK--GTVPDVLTHNYLVNELCKIGDLEKADHVIR---- 177
           ++   C  G++  A+ L + M  +  G +P+ +T+N ++N L + G+LEKA  ++     
Sbjct: 235 LLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRL 294

Query: 178 ------------------------------EMSEMRPSPNCATYNAFITGYCRVNELDKA 207
                                         EM      P   TYN  I G  +    + A
Sbjct: 295 SKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAA 354

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
              F  M   G+ P+ +T+N L++  CK G L  A+   G++     G     V+T  IL
Sbjct: 355 QVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPT---VLTYNIL 411

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D Y + GD   A  L  +M +++   D+  Y +L+NG C+  +++    +F +ML +G 
Sbjct: 412 IDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGL 471

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PD   YNT ++     G +  A      +   G++ D ++Y  +I GLC  G +  A  
Sbjct: 472 EPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYV 531

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
             + M+   +  +   +  +I  +   G L  A +I D M++ G+S +V T+   I    
Sbjct: 532 LWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYC 591

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           R G+++ A+   ++ML +G+ P+  TYN+L+ A C +G    A Q + EML RG+ P+  
Sbjct: 592 RRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKY 651

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           TYT LI G C  GN   A  ++ ++   G+  DH     L K +
Sbjct: 652 TYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGF 695



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 162/342 (47%), Gaps = 4/342 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G +  AL L   + + G  P VLT+N L++  C++GDLE A  +  EM+E 
Sbjct: 375 SLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEE 434

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY   + G C V  L      F  M + G+ P+   +N  + A    G + +A
Sbjct: 435 DCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNA 494

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +   E++       +SD +T  +L+D   K G    A  LW  M    ++ D V Y  L
Sbjct: 495 FQLREEMMLRG---ISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCL 551

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+  C  G +  A   F  M+  G  P V+TY   ++  C++G L  A  ++  + + GV
Sbjct: 552 IHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGV 611

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P++++Y  ++  LC  G    A +    MLE+ +VP  + + ++IDG  + G+  +A  
Sbjct: 612 EPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIR 671

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           +   M   G+  +  T NAL       G ++DA    + ++L
Sbjct: 672 LYCEMHQKGIHPDHCTHNALFKGFGE-GHMYDAVQYLENVVL 712



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 94/193 (48%), Gaps = 3/193 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           + +D   +  +I  LC  G +  A  L  KM+  G   D +T+  L++  C+ G L +A 
Sbjct: 506 ISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAK 565

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           ++   M     SP+  TY  FI  YCR   L  A   F  M   G+ PN VT+N+L+HAL
Sbjct: 566 NIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHAL 625

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C+ G    A +   E+L   +     +  T T+L+D   K G+   A+ L+ +M QK I 
Sbjct: 626 CRMGRTESAYQHFHEML---ERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIH 682

Query: 294 TDIVAYNVLINGF 306
            D   +N L  GF
Sbjct: 683 PDHCTHNALFKGF 695



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 1/143 (0%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
           G V   L      +   I   C  G +  A    RKM+++G  P+ +T+N L++ LC++G
Sbjct: 570 GMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMG 629

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
             E A     EM E    PN  TY   I G C+      A+ L+  M   GI P+  THN
Sbjct: 630 RTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHN 689

Query: 228 ILVHALCKKGLLGDAVKFLGEVL 250
            L      +G + DAV++L  V+
Sbjct: 690 ALFKGF-GEGHMYDAVQYLENVV 711


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 222/478 (46%), Gaps = 40/478 (8%)

Query: 118 YRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR 177
           Y  H+ VI+ LC   +I  A  +  K   +G  P+V  +  L    CK G L+ A  + R
Sbjct: 161 YTYHL-VIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFR 219

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
            +    PSP+   YNA I G+CR N+ D AL     M    + P+  T+NIL+  LCK  
Sbjct: 220 NI----PSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKAS 275

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
               A + L E++   D   T D +T   +MD   K G   +A +L   M ++N +    
Sbjct: 276 KTDKASEMLHEMV---DRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCC 332

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            YN LI+G C   ++  A     + +  GF+PDV+TY+ L + LCK+G++DEA      +
Sbjct: 333 TYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM 392

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
           S  G  P+ ++Y T+I GLC      KA E L S++    VP+   + +I+DG  + G L
Sbjct: 393 SGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRL 452

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM--------------- 462
             A  + + ML  G + +V T+ AL+    R G + +A  + KEM               
Sbjct: 453 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSL 512

Query: 463 ---------------LLDGI--FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
                          ++DGI   P +  YN L+   C  G +     ++++M  RG  P+
Sbjct: 513 VNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPN 572

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           I TY  ++ G C  G + EA      + + G   D + + I+     +  +  +AR +
Sbjct: 573 IKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQV 630



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 209/425 (49%), Gaps = 8/425 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   K   A  +  +M+ +G  PD +T N +++ LCK G  E+A  ++  M+E  
Sbjct: 267 LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 326

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+C TYN  I+G C+   +D+A  L     ++G  P+ VT++IL   LCK+G + +A 
Sbjct: 327 CRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 386

Query: 244 KFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           + + E+     GK  T +++T   L+D   K     +A  L   +       D+V Y ++
Sbjct: 387 ELVKEM----SGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTII 442

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G C  G +  A      MLKRG  P VITY  L+  LC+ G++DEA H +  +     
Sbjct: 443 VDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 502

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D ++Y +++ G C      +A++ +  +      P   ++N ++DGY + G L    +
Sbjct: 503 TADALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDGYCKEGRLDEIPN 559

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M   G   N+ T+N ++    + G + +AF   + M   G  PDV +YN++I    
Sbjct: 560 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 619

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
                  A Q+ D+M++ GI PD +TY  L+   C      +A  +   +   G+  D++
Sbjct: 620 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 679

Query: 543 PFRIL 547
            +  L
Sbjct: 680 TYNTL 684



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 226/462 (48%), Gaps = 18/462 (3%)

Query: 105 RDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC 164
           R+  P  CT  T       +I  LC    +  A  L  + +  G VPDV+T++ L + LC
Sbjct: 325 RNCRPSCCTYNT-------LISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLC 377

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           K G +++A  +++EMS    +PN  TYN  I G C+ ++ +KA  L  ++ ++G  P+ V
Sbjct: 378 KRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVV 437

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           T+ I+V  LCK+G L  A+K +  +L       T  VIT T LM+   + G   +A  ++
Sbjct: 438 TYTIIVDGLCKEGRLDKALKMVEGMLKRG---CTPSVITYTALMEGLCRTGRVDEAHHIF 494

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF--LPDVITYNTLLNCLC 342
            +M  K+   D +AY  L+NG+C +     A     Q +  G    P +  YN L++  C
Sbjct: 495 KEMVSKDCTADALAYVSLVNGYCKSSRTKEA-----QKVVDGIRGTPYIDVYNALMDGYC 549

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K+G+LDE  + +  ++  G  P+  +Y  ++ GLC HG + +A  FL SM     VP+  
Sbjct: 550 KEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVV 609

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +N+IIDG  +      A  + D M+  G+  +  T+N L+    +     DA  + K M
Sbjct: 610 SYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNM 669

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG-ITPDIITYTELIKGHCARGN 521
           +  G+ PD  TYN LI        +  A +L  EMLR G +     TY  +I   C  G 
Sbjct: 670 IKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGC 729

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           +K+A  +   +   G+  + + + I   R  +    D+A  +
Sbjct: 730 LKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSL 771



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 201/419 (47%), Gaps = 10/419 (2%)

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           +G      T N  +  L + G  ++   +   M +   +P+  TY+  I   C++N++DK
Sbjct: 119 RGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDK 178

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A  +       G +P    + IL  A CK G L DA++    +        + D I    
Sbjct: 179 AFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI-------PSPDAIAYNA 231

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           ++  + +  D   AL    +M ++ +  D+  YN+LI+G C       A     +M+ RG
Sbjct: 232 IIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRG 291

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PD +T+N++++ LCK GK + A     V+++    P   +Y T+I GLC   ++ +A+
Sbjct: 292 VTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAK 351

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + +   +    VP+   ++++ DG  + G +  AF +   M   G + N+ T+N LI   
Sbjct: 352 DLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGL 411

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            +      A+ L + ++  G  PDV TY +++   C  G +  AL++ + ML+RG TP +
Sbjct: 412 CKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSV 471

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARD 562
           ITYT L++G C  G + EA  +F ++ +     D + +  L   Y    R KE+ K  D
Sbjct: 472 ITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 530



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 216/495 (43%), Gaps = 69/495 (13%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++  LC  G++  AL +   M+++G  P V+T+  L+  LC+ G +++A H+ 
Sbjct: 435 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 494

Query: 177 REMSE--------------------------------MRPSPNCATYNAFITGYCRVNEL 204
           +EM                                  +R +P    YNA + GYC+   L
Sbjct: 495 KEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRL 554

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D+  ++F  MA  G  PN  T+NI++  LCK G + +A  FL  +          DV++ 
Sbjct: 555 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM---HSAGCVPDVVSY 611

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
            I++D  FK     +A  + + M Q  I  D V YN L+  FC       A      M+K
Sbjct: 612 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 671

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG-VAPDQISYKTIIQGLCIHGDIV 383
            G  PD +TYNTL++ L +  +L +A      + + G V     +Y TII  LC  G + 
Sbjct: 672 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLK 731

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-------------------- 423
           +A   +  M    V      +N+ ID   + G L  A S+                    
Sbjct: 732 QALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGL 791

Query: 424 -------------RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
                        R+++   G+     TFN LI A T+   + +A +L   M+  G  P 
Sbjct: 792 CKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPS 851

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V TYN++I   C L  +  A +L+DEM  RGI    ++YT LI G C +G  KEA +V  
Sbjct: 852 VITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLE 911

Query: 531 KIQTLGLAIDHIPFR 545
           ++ +    ID + + 
Sbjct: 912 EMASSDCEIDDLKWE 926



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 143/554 (25%), Positives = 228/554 (41%), Gaps = 99/554 (17%)

Query: 92  LILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           L  ++N+DR K + D   V      D   +  +   LC  G+I  A  L ++M  KG  P
Sbjct: 341 LCKQQNVDRAKDLVDEF-VSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTP 399

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           +++T+N L++ LCK    EKA  ++  +      P+  TY   + G C+   LDKAL + 
Sbjct: 400 NLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMV 459

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD------------------ 253
             M   G  P+ +T+  L+  LC+ G + +A     E+++ D                  
Sbjct: 460 EGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKS 519

Query: 254 ----------DG-KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                     DG + T  +     LMD Y K G   +   ++ DM  +    +I  YN++
Sbjct: 520 SRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIV 579

Query: 303 INGFCLNGDISSAFAYF-------C----------------------------QMLKRGF 327
           ++G C +G +  AF +        C                            QM++ G 
Sbjct: 580 MDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGI 639

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PD +TYNTL+   CK+ + D+A      + K GV PD ++Y T+I GL     +  A E
Sbjct: 640 PPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYE 699

Query: 388 FLLSMLEKS-VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
            +  ML    VV     +N IID   + G L  A  + D M   GV +N  T+N  I   
Sbjct: 700 LMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRL 759

Query: 447 TRGGSIFDAFSLKKEM---------------------------------LLDGIFPDVFT 473
            + G + +A SL  EM                                  + G+     T
Sbjct: 760 CKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHT 819

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +NLLI A      +  AL L   M++RG +P +ITY  +I   C    + +A E+F ++ 
Sbjct: 820 FNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMA 879

Query: 534 TLGLAIDHIPFRIL 547
             G+    + + +L
Sbjct: 880 VRGIVASSVSYTVL 893



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 163/371 (43%), Gaps = 7/371 (1%)

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R+ +   A+  F    + G + +  T N  +  L + G   D +  + E + D       
Sbjct: 102 RLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGS-SDRIPAMFERMLD--AGYAP 158

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           D  T  +++ S  +     +A  + +    +  + ++  Y +L   FC  G +  A   F
Sbjct: 159 DSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF 218

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             +      PD I YN +++  C++   D A  F   +++  VAPD  +Y  +I GLC  
Sbjct: 219 RNIPS----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKA 274

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
               KA E L  M+++ V P+   +N I+DG  + G    A S+  +M       +  T+
Sbjct: 275 SKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTY 334

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N LI    +  ++  A  L  E +  G  PDV TY++L    C  G I  A +L  EM  
Sbjct: 335 NTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSG 394

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
           +G TP+++TY  LI G C     ++A E+   + + G   D + + I+     +    DK
Sbjct: 395 KGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDK 454

Query: 560 ARDIHQKWLLR 570
           A  + +  L R
Sbjct: 455 ALKMVEGMLKR 465



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 127/296 (42%), Gaps = 35/296 (11%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++  +  D   +  ++   C   +   A+ + + MI+ G  PD +T+N L++ L +   L
Sbjct: 635 IQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRL 694

Query: 170 EKADHVIREMSEMRPS---PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
             A  ++ EM  +R       C TYN  I   C+   L +AL L   M  +G+  N VT+
Sbjct: 695 GDAYELMHEM--LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 752

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI------------------------ 262
           NI +  LCK+G L +A   L E+    D  + + VI                        
Sbjct: 753 NIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKG 812

Query: 263 ------TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
                 T  +L+D++ K     +AL L   M Q+     ++ YN++I   C    +  A+
Sbjct: 813 LCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAW 872

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             F +M  RG +   ++Y  L+  LC QG+  EA      ++ +    D + ++ +
Sbjct: 873 ELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDV 928


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 218/426 (51%), Gaps = 3/426 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D      +IR LC+ GKIG AL L  KMI +G  P+V+T+  L+N LCK+G+   A  
Sbjct: 123 QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIR 182

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++R M +    P+   Y + I   C+  ++ +A +LFS M   GI P+  T+  LVHALC
Sbjct: 183 LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALC 242

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
                      L +++   + K   DV+  + ++D+  K G   +A  + + M Q+ ++ 
Sbjct: 243 NLCEWKHVTTLLNQMV---NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 299

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D+V Y  L++G CL  ++  A   F  M+++GF PDVI+Y TL+N  CK  K+D+A + +
Sbjct: 300 DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLF 359

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + +    PD  +Y T++ GLC  G +  A      M+ +  +P+   +++++D   + 
Sbjct: 360 EEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKN 419

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
             L  A ++   + +  ++ ++  +N +I    R G +  A  L   +   G+ P V+TY
Sbjct: 420 CHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTY 479

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N++I   C  G ++ A +L+ EM     +PD  TY  + +G         A ++  ++  
Sbjct: 480 NIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLA 539

Query: 535 LGLAID 540
            G + D
Sbjct: 540 RGFSAD 545



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 223/470 (47%), Gaps = 38/470 (8%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T L L  +M   G  P+V T N L+N  C +  +  A  V+ ++ ++   P+  T+   I
Sbjct: 74  TVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLI 133

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   ++ +ALHLF  M + G +PN VT+  L++ LCK G    A++ L  +   + G
Sbjct: 134 RGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM---EQG 190

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC-------- 307
               DV+  T ++DS  K+    +A  L++ M  + I  DI  Y  L++  C        
Sbjct: 191 NCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHV 250

Query: 308 ---LN------------------------GDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
              LN                        G ++ A      M++RG  PDV+TY TL++ 
Sbjct: 251 TTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDG 310

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
            C Q ++DEA   + ++ + G APD ISY T+I G C    I KA      M  K  +P+
Sbjct: 311 HCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPD 370

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +N ++ G    G L +A ++   M++ G   ++ T++ L+ +  +   + +A +L K
Sbjct: 371 TKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLK 430

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            +    + PD+  YN++I   C  G +  A  L+  +  +G+ P + TY  +I G C RG
Sbjct: 431 AIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRG 490

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            + EA ++F ++     + D   +  + + + +  E+ +A  + ++ L R
Sbjct: 491 LLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLAR 540



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 204/421 (48%), Gaps = 3/421 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +++     P ++    L+  + K+        +  +M      PN  T N  I  +C +N
Sbjct: 46  RLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLN 105

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            +  A  + + +   G +P+  T   L+  LC +G +G+A+    +++  D+G    +V+
Sbjct: 106 RVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI--DEG-FQPNVV 162

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   L++   K G+   A+ L   M Q N Q D+V Y  +I+  C +  ++ AF  F QM
Sbjct: 163 TYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQM 222

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           + +G  PD+ TY +L++ LC   +    +     +  + + PD + + T++  LC  G +
Sbjct: 223 VGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKV 282

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A E +  M+++ V P+   +  ++DG+    ++  A  + D+M+  G + +V ++  L
Sbjct: 283 TEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTL 342

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    +   I  A  L +EM      PD  TYN L+   C++G +  A+ L+ EM+ RG 
Sbjct: 343 INGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQ 402

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            PD++TY+ L+   C   +++EA  +   I+   L  D   + I+     R  E + ARD
Sbjct: 403 MPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARD 462

Query: 563 I 563
           +
Sbjct: 463 L 463



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 180/379 (47%), Gaps = 3/379 (0%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           L+ A      +  M P P+   +   +T   ++      L L + M + G+ PN  T NI
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L+++ C    +G A   L ++L         D  T T L+      G   +AL L++ M 
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGH---QPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 153

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            +  Q ++V Y  LING C  G+ S+A      M +    PDV+ Y ++++ LCK  ++ 
Sbjct: 154 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 213

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA + +  +   G++PD  +Y +++  LC   +       L  M+   ++P+  I++ ++
Sbjct: 214 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 273

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           D   + G ++ A  I D+M+  GV  +V T+  L+        + +A  +   M+  G  
Sbjct: 274 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 333

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PDV +Y  LI   C +  I  A+ L++EM R+   PD  TY  L+ G C  G +++A  +
Sbjct: 334 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIAL 393

Query: 529 FAKIQTLGLAIDHIPFRIL 547
           F ++   G   D + + IL
Sbjct: 394 FHEMVARGQMPDLVTYSIL 412



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 149/321 (46%), Gaps = 38/321 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            V+  LC  GK+  A  +   MIQ+G  PDV+T+  L++  C   ++++A  V   M   
Sbjct: 271 TVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK 330

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  +Y   I GYC+++++DKA++LF  M      P+  T+N L+H LC  G L DA
Sbjct: 331 GFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDA 390

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +                                      AL+++M  +    D+V Y++L
Sbjct: 391 I--------------------------------------ALFHEMVARGQMPDLVTYSIL 412

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++  C N  +  A A    +      PD+  YN +++ +C+ G+L+ A   +  LS  G+
Sbjct: 413 LDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGL 472

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P   +Y  +I GLC  G + +A +  + M      P+   +N I  G+ +  +   A  
Sbjct: 473 HPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQ 532

Query: 423 IRDLMLSFGVSSNVFTFNALI 443
           + + ML+ G S++V T   L+
Sbjct: 533 LLEEMLARGFSADVSTTTLLV 553



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 134/282 (47%), Gaps = 38/282 (13%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  ++   CL  ++  A+ +   M++KG  PDV+++  L+N  CKI  ++KA 
Sbjct: 297 VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAM 356

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           ++  EM      P+  TYN  + G C V  L  A+ LF  M   G  P+ VT++IL+ +L
Sbjct: 357 YLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSL 416

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   L +A+  L  + A                                       N+ 
Sbjct: 417 CKNCHLEEAMALLKAIEA--------------------------------------SNLN 438

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DI  YN++I+G C  G++ +A   F  +  +G  P V TYN +++ LCK+G L+EA+  
Sbjct: 439 PDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 498

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           +  +     +PD  +Y TI +G   + + ++A + L  ML +
Sbjct: 499 FMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLAR 540



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 111/244 (45%), Gaps = 4/244 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR     D   +  +I   C   KI  A++L  +M +K  +PD  T+N L++ LC +G L
Sbjct: 328 VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRL 387

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           + A  +  EM      P+  TY+  +   C+   L++A+ L   +  + + P+   +NI+
Sbjct: 388 QDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNII 447

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  +C+ G L  A      +     G   S V T  I++    K G   +A  L+ +M  
Sbjct: 448 IDGMCRAGELEAARDLFSNL--SSKGLHPS-VWTYNIMIHGLCKRGLLNEANKLFMEMDG 504

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
            +   D   YN +  GF  N +   A     +ML RGF  DV T   L+  L   G LD+
Sbjct: 505 NDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG-LDQ 563

Query: 350 ASHF 353
           +S F
Sbjct: 564 SSCF 567



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 5/161 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L+E +  LK +  +      L  D + +  +I  +C  G++  A  L   +  KG  P V
Sbjct: 422 LEEAMALLKAIEAS-----NLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSV 476

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+N +++ LCK G L +A+ +  EM     SP+  TYN    G+ + NE  +A+ L   
Sbjct: 477 WTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEE 536

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           M   G   +  T  +LV  L   GL   +   +  VL++DD
Sbjct: 537 MLARGFSADVSTTTLLVEMLSDDGLDQSSCFLMLSVLSEDD 577


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 196/379 (51%), Gaps = 3/379 (0%)

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           +G  PDV++++ ++N  C  G+L+K   +I+EM      PN  TYN+ I   C+  ++D 
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A  +   M N GI P+ V +  L+   CK G +  A K   E+   +  +   D I  T 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEM---EKQRIVPDFIAYTA 120

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           ++    + G   +A  ++N MF + ++ D V Y  LI+G+C +G++  AF+   QM++ G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+V+TY  L + LCK G++D A+     +   G+  +  +Y +++ GLC  G+I +A 
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + +  M    + P+   +  ++D Y + G++  A  +   ML  G+   V TFN L+   
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + D   L   ML  GI P+  TYN L+   C   ++    ++Y  M  RG+ PD 
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360

Query: 507 ITYTELIKGHCARGNMKEA 525
            TY  LIKGHC   NMKEA
Sbjct: 361 NTYNILIKGHCKARNMKEA 379



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 216/424 (50%), Gaps = 3/424 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI   CLGG++   L L ++M  KG  P++ T+N ++  LCK G ++ A+ V+
Sbjct: 9   DVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVL 68

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           REM      P+   Y   I G+C++  +  A  LF  M    I P+ + +  ++  LC+ 
Sbjct: 69  REMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRC 128

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A K   ++ +        D +T T L+D Y K+G+  +A +L N M Q  +  ++
Sbjct: 129 GKMMEADKVFNKMFSRG---VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNV 185

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  L +G C  G + +A     +M  +G   ++ TYN+L+N LCK G + +A      
Sbjct: 186 VTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEE 245

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G+ PD I++ T++   C  G++VKA E L  ML++ + P    +NV+++G+   G 
Sbjct: 246 MEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGM 305

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L +   +   ML  G+  N  T+N+L+       ++     + K M   G+ PD  TYN+
Sbjct: 306 LEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNI 365

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C   ++  A  L+ EM  +G      +Y  +IKG   +  + EA E+F +++  G
Sbjct: 366 LIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREG 425

Query: 537 LAID 540
           +A D
Sbjct: 426 MAAD 429



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 203/415 (48%), Gaps = 3/415 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ +   + ++I  LC  GK+  A  + R+MI +G VPD + +  L++  CK+G+++ A 
Sbjct: 41  LKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAY 100

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM + R  P+   Y A I G CR  ++ +A  +F+ M + G+ P+ VT+  L+   
Sbjct: 101 KLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGY 160

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G +  A     +++       T +V+T T L D   K G    A  L ++M  K +Q
Sbjct: 161 CKSGEMEKAFSLHNQMVQSG---LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQ 217

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +I  YN L+NG C +G+I  A     +M   G  PD IT+ TL++  CK G++ +A   
Sbjct: 218 LNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHEL 277

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+ P  I++  ++ G C+ G +      L  MLEK ++P    +N ++  Y  
Sbjct: 278 LREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCI 337

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             ++     I   M + GV  +  T+N LI    +  ++ +A+ L KEM   G      +
Sbjct: 338 RNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASS 397

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           YN +I        I  A +L++EM R G+  D   Y   +      GNM+ A E+
Sbjct: 398 YNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALEL 452



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 176/367 (47%), Gaps = 38/367 (10%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           +P+  +Y+  I GYC   EL K L L   M   G++PN  T+N ++  LCK G + DA +
Sbjct: 7   APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L E                                      M  + I  D V Y  LI+
Sbjct: 67  VLRE--------------------------------------MINQGIVPDTVVYTTLID 88

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           GFC  G+I +A+  F +M K+  +PD I Y  ++  LC+ GK+ EA   +  +   GV P
Sbjct: 89  GFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEP 148

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D+++Y T+I G C  G++ KA      M++  + P    +  + DG  + G +  A  + 
Sbjct: 149 DEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELL 208

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
             M   G+  N+ T+N+L+    + G+I  A  L +EM + G++PD  T+  L+ A C  
Sbjct: 209 HEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKT 268

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G +  A +L  EML RG+ P +IT+  L+ G C  G +++ E + A +   G+  +   +
Sbjct: 269 GEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTY 328

Query: 545 RILKKRY 551
             L K+Y
Sbjct: 329 NSLMKQY 335



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 185/383 (48%), Gaps = 38/383 (9%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D+  + AVI  LC  GK+  A  +  KM  +G  PD +T+  L++  CK G++EKA  + 
Sbjct: 114 DFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLH 173

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M +   +PN  TY A   G C++ ++D A  L   M   G++ N  T+N LV+ LCK 
Sbjct: 174 NQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKS 233

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G +  AVK + E+   +      D IT T LMD+Y K G+  +A  L  +M  + +Q  +
Sbjct: 234 GNIRQAVKLMEEM---EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTV 290

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + +NVL+NGFC++G +         ML++G +P+  TYN+L+   C +  +   +  Y  
Sbjct: 291 ITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKG 350

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   GV PD  +Y  +I+G C      KAR                             +
Sbjct: 351 MCARGVMPDSNTYNILIKGHC------KAR-----------------------------N 375

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A+ +   M   G +    ++N++I    +   I +A  L +EM  +G+  D   YNL
Sbjct: 376 MKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNL 435

Query: 477 LIGASCNLGHIHLALQLYDEMLR 499
            +  S   G++  AL+L DE + 
Sbjct: 436 FVDISYGEGNMETALELCDEAIE 458



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 148/276 (53%)

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D+V+Y+ +ING+CL G++        +M  +G  P++ TYN+++  LCK GK+D+A    
Sbjct: 9   DVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVL 68

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G+ PD + Y T+I G C  G+I  A +    M ++ +VP+   +  +I G  RC
Sbjct: 69  REMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRC 128

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G +  A  + + M S GV  +  T+  LI    + G +  AFSL  +M+  G+ P+V TY
Sbjct: 129 GKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTY 188

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
             L    C LG +  A +L  EM  +G+  +I TY  L+ G C  GN+++A ++  +++ 
Sbjct: 189 TALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV 248

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            G+  D I F  L   Y +  E  KA ++ ++ L R
Sbjct: 249 AGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDR 284



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 153/315 (48%), Gaps = 9/315 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  +I   C  G++  A  L  +M+Q G  P+V+T+  L + LCK+G ++ A+
Sbjct: 146 VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTAN 205

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM       N  TYN+ + G C+   + +A+ L   M   G+ P+ +T   L+ A 
Sbjct: 206 ELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAY 265

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG--DKFQALALWNDMFQKN 291
           CK G +  A + L E+L   D      VIT  +LM+ +  +G  +  + L  W  M +K 
Sbjct: 266 CKTGEMVKAHELLREML---DRGLQPTVITFNVLMNGFCMSGMLEDGERLLAW--MLEKG 320

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           I  +   YN L+  +C+  ++      +  M  RG +PD  TYN L+   CK   + EA 
Sbjct: 321 IMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAW 380

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID-G 410
             +  +++ G      SY +II+G      I +ARE    M  + +  +  I+N+ +D  
Sbjct: 381 FLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDIS 440

Query: 411 YGRCGDLSNAFSIRD 425
           YG  G++  A  + D
Sbjct: 441 YGE-GNMETALELCD 454



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 3/200 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G++  A  L R+M+ +G  P V+T N L+N  C  G LE  + ++  M E    PN 
Sbjct: 266 CKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNT 325

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN+ +  YC  N +     ++  M   G+ P+  T+NIL+   CK   + +A  FL +
Sbjct: 326 TTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAW-FLHK 384

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
            +A+     T+    S I      K     +A  L+ +M ++ +  D   YN+ ++    
Sbjct: 385 EMAEKGFNLTASSYNSIIKGFFKKKKIS--EARELFEEMRREGMAADAEIYNLFVDISYG 442

Query: 309 NGDISSAFAYFCQMLKRGFL 328
            G++ +A     + ++  FL
Sbjct: 443 EGNMETALELCDEAIENCFL 462


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 210/418 (50%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LCL GK   A+ L  KM++ G  P+ +T+  ++N +CK G    A  ++R+M E 
Sbjct: 296 TLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 355

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +   Y+  I G C+   LD A +LF+ M   GI  N +T+NIL+   C  G   D 
Sbjct: 356 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 415

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K L +++     K   +V+T ++L+DS+ K G   +A  L  +M  + I  D + Y  L
Sbjct: 416 AKLLRDMIKR---KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 472

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC    +  A      M+ +G  P++ T+N L+N  CK  ++D+    +  +S  GV
Sbjct: 473 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 532

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D ++Y T+IQG C  G +  A+E    M+ + V P    + +++DG    G+   A  
Sbjct: 533 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 592

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I + +    +  ++  +N +I        + DA+ L   + L G+ P V TYN++IG  C
Sbjct: 593 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 652

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             G +  A  L+ +M   G  PD  TY  LI+ H   G+  ++ ++  +++  G ++D
Sbjct: 653 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 710



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 209/404 (51%), Gaps = 3/404 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            L L ++M  KG   ++ T + ++N  C+   L  A   + ++ ++   PN  T++  I 
Sbjct: 205 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLIN 264

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C    + +AL L   M   G +P+ +T N LV+ LC  G   +A+  + +++   +  
Sbjct: 265 GLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV---EYG 321

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              + +T   +++   K+G    A+ L   M ++NI+ D V Y+++I+G C +G + +AF
Sbjct: 322 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 381

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F +M  +G   ++ITYN L+   C  G+ D+ +     + K  + P+ +++  +I   
Sbjct: 382 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 441

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
              G + +A E    M+ + + P+   +  +IDG+ +   L  A  + DLM+S G   N+
Sbjct: 442 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 501

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            TFN LI    +   I D   L ++M L G+  D  TYN LI   C LG +++A +L+ E
Sbjct: 502 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 561

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           M+ R + P+I+TY  L+ G C  G  ++A E+F KI+   + +D
Sbjct: 562 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 605



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 219/457 (47%), Gaps = 44/457 (9%)

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           R LCL      A     K+I+ G  P+ +T + L+N LC  G + +A  ++  M EM   
Sbjct: 235 RKLCL------AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 288

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  T N  + G C   +  +A+ L   M   G +PN VT+  +++ +CK G    A++ 
Sbjct: 289 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 348

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L ++   ++     D +  +I++D   K+G    A  L+N+M  K I T+I+ YN+LI G
Sbjct: 349 LRKM---EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           FC  G           M+KR   P+V+T++ L++   K+GKL EA   +  +   G+APD
Sbjct: 406 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 465

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            I+Y ++I G C    + KA + +  M+ K   P    +N++I+GY +   + +   +  
Sbjct: 466 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 525

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   GV ++  T+N LI      G +  A  L +EM+   + P++ TY +L+   C+ G
Sbjct: 526 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 585

Query: 486 HIHLALQLYDEMLR-----------------------------------RGITPDIITYT 510
               AL++++++ +                                   +G+ P + TY 
Sbjct: 586 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 645

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +I G C +G + EAE +F K++  G A D   + IL
Sbjct: 646 IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 682



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 191/403 (47%), Gaps = 6/403 (1%)

Query: 171 KADHVI---REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           KAD  I   R+M   RP P    ++   +   +  + D  L L   M   GI  N  T +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           I+++  C+   L  A   +G+++         + IT + L++     G   +AL L + M
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIK---LGYEPNTITFSTLINGLCLEGRVSEALELVDRM 282

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            +   + D++  N L+NG CL+G  + A     +M++ G  P+ +TY  +LN +CK G+ 
Sbjct: 283 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 342

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
             A      + +  +  D + Y  II GLC HG +  A      M  K +      +N++
Sbjct: 343 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 402

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I G+   G   +   +   M+   ++ NV TF+ LI +  + G + +A  L KEM+  GI
Sbjct: 403 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 462

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PD  TY  LI   C   H+  A Q+ D M+ +G  P+I T+  LI G+C    + +  E
Sbjct: 463 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 522

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +F K+   G+  D + +  L + +  + + + A+++ Q+ + R
Sbjct: 523 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 565



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 184/400 (46%), Gaps = 38/400 (9%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D  ++  +I  LC  G +  A  L  +M  KG   +++T+N L+   C  G  +   
Sbjct: 357 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 416

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++R+M + + +PN  T++  I  + +  +L +A  L   M + GI P+ +T+  L+   
Sbjct: 417 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 476

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+  L  A + +                                      + M  K   
Sbjct: 477 CKENHLDKANQMV--------------------------------------DLMVSKGCD 498

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +I  +N+LING+C    I      F +M  RG + D +TYNTL+   C+ GKL+ A   
Sbjct: 499 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 558

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  +    V P+ ++YK ++ GLC +G+  KA E    + +  +  +  I+N+II G   
Sbjct: 559 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 618

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              + +A+ +   +   GV   V T+N +I    + G + +A  L ++M  DG  PD +T
Sbjct: 619 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 678

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           YN+LI A    G    +++L +E+ R G + D  T   +I
Sbjct: 679 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 718


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 144/436 (33%), Positives = 226/436 (51%), Gaps = 11/436 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR  C       A  LRR+M+ +G +P V+T+N ++  LC++G +  A   +  M    
Sbjct: 283 LIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNED 342

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  +YN  I GY R+    +AL LFS + +  + P+ VT+N L+   C+ G L    
Sbjct: 343 LMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLD--- 399

Query: 244 KFLGEVLADDDGK--ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
             + + + DD  K     DV+T TIL+  + + G+   A  L+++M  + ++ D +AY  
Sbjct: 400 --IAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTT 457

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
            I G    G+ S AF    +M   GF PD+ITYN L+N LCK G  D+A+     +   G
Sbjct: 458 RIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEG 517

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD ++Y +II    I G + KA E    ML+K + P    + V+I  Y   G L  A 
Sbjct: 518 IVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAK 577

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
              D M   GVS NV T+NALI    +   +  A++L  EM   G+ P+ +TY +LI  +
Sbjct: 578 KYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINEN 637

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
            NL +   AL+LY +ML R I PD  T++ L+K H ++     A     +++ L LAI  
Sbjct: 638 SNLQYWQDALKLYKDMLDREIKPDSCTHSALMK-HLSKDYKLLA---VLRLENLPLAIVE 693

Query: 542 IPFRILKKRYRRMKES 557
           I    + + + +++ES
Sbjct: 694 INSTWIAEGFVKLEES 709



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 226/438 (51%), Gaps = 3/438 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++C +         ++   C  G++G A+ +   M   G  P+ +++N LVN L   G+ 
Sbjct: 199 IKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEF 258

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  +I +MS +    +  TYN  I G+C+    ++A  L   M   G  P  VT+N +
Sbjct: 259 DRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTI 318

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +++LC+ G + DA ++L +V+ ++D     D+++   L+  Y + G+  +AL L++++  
Sbjct: 319 MYSLCRLGRVSDARRYL-DVMVNED--LMPDLVSYNTLIYGYSRLGNFAEALLLFSELRS 375

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           KN+   +V YN LI+G C  G++  A      M+K G  PDV+T+  L+   C+ G L  
Sbjct: 376 KNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPM 435

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   +  +   G+ PD I+Y T I G    G+  KA      M  +   P+   +NV+I+
Sbjct: 436 AKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLIN 495

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  + G+  +A  +   M   G+  +  T+ ++I A    G +  A  +  +ML  GI P
Sbjct: 496 GLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHP 555

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            V TY +LI +    G +  A + +DEM  +G++P++ITY  LI G C    M  A  +F
Sbjct: 556 SVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLF 615

Query: 530 AKIQTLGLAIDHIPFRIL 547
           A++++ G++ +   + IL
Sbjct: 616 AEMESKGVSPNKYTYTIL 633



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 210/404 (51%), Gaps = 3/404 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           MI+    P ++T N +++  CK G++ +A  V+  M      PN  +YN  + G     E
Sbjct: 198 MIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGE 257

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            D+A  L   M+  G++ +  T+N L+   CKK +  +A     E+L      A   V+T
Sbjct: 258 FDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRG---ALPTVVT 314

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              +M S  + G    A    + M  +++  D+V+YN LI G+   G+ + A   F ++ 
Sbjct: 315 YNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELR 374

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            +  +P V+TYNTL++  C+ G LD A      + K G+ PD +++  +++G C  G++ 
Sbjct: 375 SKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLP 434

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A+E    ML + + P+   +   I G  + G+ S AF +++ M + G   ++ T+N LI
Sbjct: 435 MAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLI 494

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G+  DA  L ++M L+GI PD  TY  +I A    G +  A +++ +ML++GI 
Sbjct: 495 NGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIH 554

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           P ++TYT LI  +  RG +  A++ F ++Q  G++ + I +  L
Sbjct: 555 PSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNAL 598



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 185/367 (50%), Gaps = 3/367 (0%)

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           L+K L +F  M NNG+ P+    N ++  L  K ++ + V+ +  V+     + T  ++T
Sbjct: 153 LEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNE-VEEVYSVMIKCQIRPT--IVT 209

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              +MDS  K G+  +A+ + + M       + V+YNVL+NG    G+   A     QM 
Sbjct: 210 FNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMS 269

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G      TYN L+   CK+   +EA+     +   G  P  ++Y TI+  LC  G + 
Sbjct: 270 MLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVS 329

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            AR +L  M+ + ++P+   +N +I GY R G+ + A  +   + S  +  +V T+N LI
Sbjct: 330 DARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLI 389

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               R G++  A  +K +M+  G+ PDV T+ +L+   C +G++ +A +L+DEML RG+ 
Sbjct: 390 DGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLK 449

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PD I YT  I G    GN  +A  +  +++  G   D I + +L     ++   D A ++
Sbjct: 450 PDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANEL 509

Query: 564 HQKWLLR 570
            QK  L 
Sbjct: 510 VQKMRLE 516



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 70/325 (21%)

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV------------------ 331
           +N +  +   ++LI  F     +      F +M+  G LPDV                  
Sbjct: 131 RNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNE 190

Query: 332 -----------------ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
                            +T+NT+++  CK+G++  A     V+   G  P+ +SY  ++ 
Sbjct: 191 VEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVN 250

Query: 375 GLCIHGDIVKAREFL-----------------------------------LSMLEKSVVP 399
           GL   G+  +A+E +                                     ML +  +P
Sbjct: 251 GLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALP 310

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +N I+    R G +S+A    D+M++  +  ++ ++N LI   +R G+  +A  L 
Sbjct: 311 TVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLF 370

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            E+    + P V TYN LI   C  G++ +A  + D+M++ G+ PD++T+T L++G C  
Sbjct: 371 SELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQM 430

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPF 544
           GN+  A+E+F ++ + GL  D I +
Sbjct: 431 GNLPMAKELFDEMLSRGLKPDCIAY 455



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 3/169 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D+  + ++I    + G +  A  +   M++KG  P V+T+  L++     G L+ A    
Sbjct: 521 DHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYF 580

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM +   SPN  TYNA I G C+ N +D A +LF+ M + G+ PN+ T+ IL++     
Sbjct: 581 DEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNL 640

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
               DA+K   ++L   D +   D  T + LM    K+      L L N
Sbjct: 641 QYWQDALKLYKDML---DREIKPDSCTHSALMKHLSKDYKLLAVLRLEN 686


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 214/417 (51%), Gaps = 3/417 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M + G  P ++T N L++ LC    +  A  +  EM +M   P+  TY+  I G C++  
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
              AL L   M   G +PN V +N ++ +LCK  L+ +A+ F  E++ +       DV T
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEG---IPPDVFT 117

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            + ++  +   G   +A +L+  M ++N+  + V + +LI+G C    IS A+  F  M 
Sbjct: 118 YSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMT 177

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           ++G  PDV TYN L++  C + ++DEA   + ++ + G AP+  SY  +I G C  G I 
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRID 237

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A+  L  M  KS+ P+   ++ ++ G+ + G    A  +   M S+G+  N+ T++ ++
Sbjct: 238 EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G + +AF L K M    I P++F Y +LI   C  G +  A +L+  +  +GI 
Sbjct: 298 DGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQ 357

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           P ++TYT +I G    G   EA E+F ++   G   +   + ++ + + R  ++  A
Sbjct: 358 PTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNA 414



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 211/425 (49%), Gaps = 3/425 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC   KI  A+ L  +M++ G  PDV+T++ ++N LCK+G+   A  ++++M E 
Sbjct: 15  TLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEK 74

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   YN  I   C+   + +A+  FS M   GI P+  T++ ++H  C  G + +A
Sbjct: 75  GCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEA 134

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                +++  +      + +T TIL+D   K     +A  ++  M +K ++ D+  YN L
Sbjct: 135 TSLFKQMVERN---VIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNAL 191

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+C    +  A   F  M ++G  P+V +YN L+N  CK G++DEA      +S   +
Sbjct: 192 VDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSL 251

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  +Y T+++G C  G   +A+E L  M    ++P    +++++DG  + G L  AF 
Sbjct: 252 TPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFE 311

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M    +  N+F +  LI      G +  A  L   + + GI P V TY ++I    
Sbjct: 312 LLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLL 371

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G  + A +L+ EM   G  P+  TY  +I+G    G+   A  +  ++   G + D  
Sbjct: 372 KGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSS 431

Query: 543 PFRIL 547
            FR+L
Sbjct: 432 TFRML 436



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 202/398 (50%), Gaps = 3/398 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   +  +I  LC  G    AL L +KM +KG  P+V+ +N +++ LCK   + +A  
Sbjct: 42  EPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMD 101

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
              EM +    P+  TY++ + G+C +  +++A  LF  M    + PN+VT  IL+  LC
Sbjct: 102 FFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLC 161

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           KK ++ +A   + E + +       DV T   L+D Y       +A  L+N M +K    
Sbjct: 162 KKRMISEAW-LVFETMTEKG--LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAP 218

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++ +YN+LING C +G I  A     +M  +   PD+ TY+TL+   C+ G+  EA    
Sbjct: 219 NVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELL 278

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G+ P+ I+Y  ++ GLC HG + +A E L +M E  + P   I+ ++I+G    
Sbjct: 279 KEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTF 338

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G L  A  +   +   G+   V T+  +I    +GG   +A  L +EM ++G  P+  TY
Sbjct: 339 GKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTY 398

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
           N++I      G    A++L +EM+ +G + D  T+  L
Sbjct: 399 NVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 172/352 (48%), Gaps = 8/352 (2%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D ++ E +D    M   G     +  D   + +++   C  G++  A  L ++M+++  +
Sbjct: 93  DRLVTEAMDFFSEMVKEG-----IPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVI 147

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+ +T   L++ LCK   + +A  V   M+E    P+  TYNA + GYC  +++D+A  L
Sbjct: 148 PNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKL 207

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F+ M   G  PN  ++NIL++  CK G + +A   L E+        T D+ T + LM  
Sbjct: 208 FNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEM---SHKSLTPDIFTYSTLMRG 264

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + + G   +A  L  +M    +  +++ Y+++++G C +G +  AF     M +    P+
Sbjct: 265 FCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPN 324

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           +  Y  L+  +C  GKL+ A   +  L   G+ P  ++Y  +I GL   G   +A E   
Sbjct: 325 IFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFR 384

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            M     +P    +NVII G+ R GD  NA  + + M+  G S++  TF  L
Sbjct: 385 EMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 146/277 (52%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           MF+  +Q  +V +N L++G C    I  A   F +M+K G  PDVITY+T++N LCK G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
              A      + + G  P+ ++Y TII  LC    + +A +F   M+++ + P+   ++ 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           I+ G+   G ++ A S+   M+   V  N  TF  LI    +   I +A+ + + M   G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           + PDV+TYN L+   C+   +  A +L++ M R+G  P++ +Y  LI GHC  G + EA+
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            + A++    L  D   +  L + + ++    +A+++
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQEL 277



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 70/145 (48%)

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M   G+   + TFN L+        I DA  L  EM+  G  PDV TY+ +I   C +G+
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
             +ALQL  +M  +G  P+++ Y  +I   C    + EA + F+++   G+  D   +  
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 547 LKKRYRRMKESDKARDIHQKWLLRN 571
           +   +  +   ++A  + ++ + RN
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERN 145


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 222/449 (49%), Gaps = 17/449 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  L   G+  T   +   M+ +G  P+V+T+  L++  C+ GD  KA  +  EM E +
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P    Y   I G C  + + +A  +F TM N+G+ PN  T+N ++   CK   +  A+
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+L D       +V+T  IL+D   K  +   A     DM    +  +I  YN LI
Sbjct: 284 ELYXEMLGDG---LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+C  G++S A +   ++ K   LPDV TY+ L+  LC   +++EA      + K G  
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y T+I G C  G++ KA E    M EK + P    ++ +IDGY + G +  A  +
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+  G+  +V  + ALI    + G+  +AF L KEM   G+ P+VFT + LI   C 
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520

Query: 484 LGHIHLALQLY-------------DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
            G I  A++L+             +E+ R   +P+ + YT LI+G C  G + +A + F+
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580

Query: 531 KIQTLGLAIDHIP-FRILKKRYRRMKESD 558
            ++  GL  D      I++  +R M   D
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRD 609



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 217/443 (48%), Gaps = 16/443 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G    A  L  +MI+K   P V+ +  L+  LC    + +A+ + R M    
Sbjct: 199 LIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSG 258

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYN  + GYC++  + KAL L+  M  +G+ PN VT  IL+  LCK   +  A 
Sbjct: 259 MLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSAR 318

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           KFL ++ +        ++     L+D Y K G+  +AL+L +++ +  I  D+  Y++LI
Sbjct: 319 KFLIDMASFG---VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILI 375

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C    +  A     +M K+GFLP+ +TYNTL++  CK+G +++A      +++ G+ 
Sbjct: 376 KGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIE 435

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ I++ T+I G C  G +  A      M+ K ++P+   +  +IDG+ + G+   AF +
Sbjct: 436 PNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRL 495

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL-----------KKEMLLDGIF--PD 470
              M   G+  NVFT + LI    + G I DA  L            K   LD     P+
Sbjct: 496 HKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPN 555

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
              Y  LI   C  G I  A + + +M   G+ PD+ T   +I+GH    ++++   + A
Sbjct: 556 HVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQA 615

Query: 531 KIQTLGLAIDHIPFRILKKRYRR 553
            I  +G+  +   +R+L K Y  
Sbjct: 616 DILKMGIIPNSSVYRVLAKGYEE 638



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 189/398 (47%), Gaps = 6/398 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  ALW+  KM     +P +   N +++ L K G  +    V  +M     SPN  TY
Sbjct: 140 GLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTY 196

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I G CR  +  KA  LF  M    I P  V + IL+  LC +  + +A      +  
Sbjct: 197 GTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM-- 254

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     ++ T   +MD Y K     +AL L+ +M    +  ++V + +LI+G C   +
Sbjct: 255 -RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDE 313

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           + SA  +   M   G +P++  YN L++  CK G L EA   +  + K  + PD  +Y  
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSI 373

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I+GLC    + +A   L  M +K  +P    +N +IDGY + G++  A  +   M   G
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N+ TF+ LI    + G +  A  L  EM++ G+ PDV  Y  LI      G+   A 
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +L+ EM   G+ P++ T + LI G C  G + +A ++F
Sbjct: 494 RLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 205/393 (52%), Gaps = 8/393 (2%)

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           +V+  +   + +PN   +   I  +  +  +++AL ++  M    + P     N+++  L
Sbjct: 114 NVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGL 168

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            KKG      K  G+++A     A+ +V+T   L+D   + GD  +A  L+++M +K I 
Sbjct: 169 VKKGRFDTMWKVYGDMVARG---ASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF 225

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             +V Y +LI G C    IS A + F  M   G LP++ TYNT+++  CK   + +A   
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  +   G+ P+ +++  +I GLC   ++V AR+FL+ M    VVP   ++N +IDGY +
Sbjct: 286 YXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G+LS A S+   +    +  +VFT++ LI        + +A  L +EM   G  P+  T
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN LI   C  G++  A+++  +M  +GI P+IIT++ LI G+C  G M+ A  ++ ++ 
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             GL  D + +  L   + +   + +A  +H++
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKE 498



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 196/420 (46%), Gaps = 20/420 (4%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +IR LC   +I  A  + R M   G +P++ T+N +++  CKI  ++KA  +  EM 
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEML 290

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  T+   I G C+ +E+  A      MA+ G+ PN   +N L+   CK G L 
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+    E+   +  +   DV T +IL+          +A  L  +M +K    + V YN
Sbjct: 351 EALSLHSEI---EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G+C  G++  A     QM ++G  P++IT++TL++  CK GK++ A   Y  +   
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ PD ++Y  +I G    G+  +A      M E  + P     + +IDG  + G +S+A
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA 527

Query: 421 FSIRDLMLSFGV---------------SSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
             I+  +   G                S N   + ALI      G IF A     +M   
Sbjct: 528 --IKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCS 585

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G+ PDVFT  ++I       H+   + L  ++L+ GI P+   Y  L KG+   G +K A
Sbjct: 586 GLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSA 645



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 182/366 (49%), Gaps = 12/366 (3%)

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA--VKFLGEVLADDDGKATSDVITST 265
            ++ S + ++   PN     +L+ A  + GL+ +A  V +  +VL          +    
Sbjct: 113 FNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMDVLPA--------MQACN 162

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           +++D   K G       ++ DM  +    ++V Y  LI+G C  GD   AF  F +M+++
Sbjct: 163 MVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEK 222

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
              P V+ Y  L+  LC + ++ EA   +  +  +G+ P+  +Y T++ G C    + KA
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E    ML   ++P    + ++IDG  +  ++ +A      M SFGV  N+F +N LI  
Sbjct: 283 LELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G++ +A SL  E+    I PDVFTY++LI   C +  +  A  L  EM ++G  P+
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            +TY  LI G+C  GNM++A EV +++   G+  + I F  L   Y +  + + A  ++ 
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 566 KWLLRN 571
           + +++ 
Sbjct: 463 EMVIKG 468



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 196/424 (46%), Gaps = 25/424 (5%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E     +TMR++G     +  +   +  ++   C    +  AL L  +M+  G +P+V
Sbjct: 244 ISEAESMFRTMRNSG-----MLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNV 298

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T   L++ LCK  ++  A   + +M+     PN   YN  I GYC+   L +AL L S 
Sbjct: 299 VTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE 358

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           +  + I P+  T++IL+  LC    + +A   L E+          + +T   L+D Y K
Sbjct: 359 IEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM---KKKGFLPNAVTYNTLIDGYCK 415

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G+  +A+ + + M +K I+ +I+ ++ LI+G+C  G + +A   + +M+ +G LPDV+ 
Sbjct: 416 EGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVA 475

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM- 392
           Y  L++   K G   EA   +  + + G+ P+  +   +I GLC  G I  A +  L+  
Sbjct: 476 YTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKT 535

Query: 393 -----------LEKSVVPEPHI-WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
                      L++S+    H+ +  +I G    G +  A      M   G+  +VFT  
Sbjct: 536 GTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCI 595

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            +I    R   + D   L+ ++L  GI P+   Y +L       G++  AL    E    
Sbjct: 596 VIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGE---- 651

Query: 501 GITP 504
           G+ P
Sbjct: 652 GVQP 655



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/247 (21%), Positives = 97/247 (39%), Gaps = 30/247 (12%)

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           KA  + R+M      P+  T    ++    +  LD    + + + + G+  +   +N L+
Sbjct: 732 KALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLI 791

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           +   K G +G A +         DG    DV T T ++  +  +G   +AL L+ +M + 
Sbjct: 792 NMYSKCGEIGTARRLF-------DGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKET 844

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
           N +      N         G+  S+            LP+ +T+  +L      G ++E 
Sbjct: 845 NKRARKNKRN---------GEXESSLV----------LPNDVTFMGVLMACSHAGLVEEG 885

Query: 351 -SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
             HF  +     + P    +  ++  LC  G + +A EF+L M    V P   +W  ++ 
Sbjct: 886 KQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLLG 942

Query: 410 GYGRCGD 416
                GD
Sbjct: 943 ACSLQGD 949


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 233/484 (48%), Gaps = 41/484 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQK---GTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +++ LC   +   AL L   M      G+ PDV+++  ++N   K GD +KA     EM 
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    P+  TYN+ I   C+   +DKA+ + +TM  NG+ P+ +T+N ++H  C  G   
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 283

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+ FL ++ +D       DV+T ++LMD   KNG   +A  +++ M ++ ++ +I  Y 
Sbjct: 284 EAIGFLKKMRSDG---VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYG 340

Query: 301 VLINGFCL-----------------------------------NGDISSAFAYFCQMLKR 325
            L+ G+                                      G +  A   F +M ++
Sbjct: 341 TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQ 400

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  P+ +TY  ++  LCK G++++A  ++  +   G++P  I Y ++I GLC      +A
Sbjct: 401 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 460

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E +L ML++ +      +N IID + + G +  +  + +LM+  GV  NV T+N LI  
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLING 520

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
               G + +A  L   M+  G+ P+  TY+ LI   C +  +  AL L+ EM   G++PD
Sbjct: 521 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           IITY  +++G         A+E++ +I   G  I+   + I+     + K +D A  + Q
Sbjct: 581 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 640

Query: 566 KWLL 569
              L
Sbjct: 641 NLCL 644



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 193/397 (48%), Gaps = 1/397 (0%)

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
             PD+ T+  L+   C+ G L+     +  + +     +   +   + G C       A+
Sbjct: 83  VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142

Query: 209 HL-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
            +    M   G  PN  ++NIL+  LC +    +A++ L  +  D  G +  DV++ T +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           ++ +FK GD  +A + +++M  + I  D+V YN +I   C    +  A      M+K G 
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +PD +TYN++L+  C  G+  EA  F   +   GV PD ++Y  ++  LC +G  ++AR+
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
              SM ++ + PE   +  ++ GY   G L     + DLM+  G+  + + F+ LI A  
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G +  A  +  +M   G+ P+  TY  +IG  C  G +  A+  +++M+  G++P  I
Sbjct: 383 NQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            Y  LI G C     + AEE+  ++   G+ ++ I F
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 479



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 195/430 (45%), Gaps = 19/430 (4%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++ G  PD    + L+      G +++A  V  +M +   +PN  TY A I   C+   
Sbjct: 362 MVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           ++ A+  F  M + G+ P  + +N L+H LC       A + + E+L  D G   + +  
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML--DRGICLNTIFF 479

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           ++I+ DS+ K G   ++  L+  M +  ++ +++ YN LING+CL G +  A      M+
Sbjct: 480 NSII-DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  P+ +TY+TL+N  CK  ++++A   +  +  +GV+PD I+Y  I+QGL       
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A+E  + + E     E   +N+I+ G  +     +A  +   +    +     TFN +I
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            A  + G   +A  L      +G+ P+ +TY L+       G +    QL+  M   G T
Sbjct: 659 DALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 718

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKI---------QTLGLAIDHIP-------FRIL 547
            D      +++    RG +  A    + I          T  L ID +        +R L
Sbjct: 719 VDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYYRFL 778

Query: 548 KKRYRRMKES 557
            ++Y+   ES
Sbjct: 779 PEKYKSFIES 788



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 151/315 (47%), Gaps = 4/315 (1%)

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           + T D+ T  IL+    + G      A   ++ +K  + D +A+  L+ G C +   S A
Sbjct: 82  EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141

Query: 316 FAYFCQ-MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK---TGVAPDQISYKT 371
                + M + G +P+V +YN LL  LC + +  EA     +++     G  PD +SY T
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G    GD  KA      ML++ ++P+   +N II    +   +  A  + + M+  G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           V  +  T+N+++      G   +A    K+M  DG+ PDV TY+LL+   C  G    A 
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +++D M +RG+ P+I TY  L++G+  +G + E   +   +   G+  DH  F IL   Y
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381

Query: 552 RRMKESDKARDIHQK 566
               + D+A  +  K
Sbjct: 382 ANQGKVDQAMLVFSK 396



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 149/333 (44%), Gaps = 38/333 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE- 181
           AVI  LC  G++  A+    +MI +G  P  + +N L++ LC     E+A+ +I EM + 
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470

Query: 182 ----------------------------------MRPSPNCATYNAFITGYCRVNELDKA 207
                                             +   PN  TYN  I GYC   ++D+A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + L S M + G++PN VT++ L++  CK   + DA+    E+   +    + D+IT  I+
Sbjct: 531 MKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM---ESSGVSPDIITYNII 587

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +   F+      A  L+  + +   Q ++  YN++++G C N     A   F  +     
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL 647

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             +  T+N +++ L K G+ DEA   +   S  G+ P+  +Y+ + + +   G + +  +
Sbjct: 648 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 707

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
             LSM +     +  + N I+    + G+++ A
Sbjct: 708 LFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 122/300 (40%), Gaps = 38/300 (12%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR  ++ +   +  +I   CL GK+  A+ L   M+  G  P+ +T++ L+N  CKI  +
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E A  + +EM     SP+  TYN  + G  +      A  L+  +  +G +    T+NI+
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +H LCK  L  DA++                                 FQ L L      
Sbjct: 623 LHGLCKNKLTDDALQM--------------------------------FQNLCLM----- 645

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
            +++ +   +N++I+     G    A   F      G +P+  TY  +   +  QG L+E
Sbjct: 646 -DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
               +  +   G   D      I++ L   G+I +A  +L  + EK    E    ++ ID
Sbjct: 705 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 5/135 (3%)

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML---LDGIFPDVFTYN 475
           +A  + D +L  G  ++++  N   LA+    S   A S    M     D + PD+ TY 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNR-ALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE-VFAKIQT 534
           +LIG  C  G + L       ++++G   D I +T L+KG CA     +A + V  ++  
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 535 LGLAIDHIPFRILKK 549
           LG   +   + IL K
Sbjct: 152 LGCIPNVFSYNILLK 166


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 212/418 (50%), Gaps = 35/418 (8%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P   + N L+  L     ++ A+   R     R SP+  T+N  I+G CR+ +L KA  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              +   G+ P+  T+N L+   CKKG                                 
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKG--------------------------------- 240

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
               G+ +    L  +M +  I    V + VLING+C N + ++A   F +M ++G    
Sbjct: 241 --GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+TYN+L++ LC +GK++E       +   G++P++I++  +++G C  G +  A +++ 
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M E++V P+  I+N++ID Y R G + +A ++++ M   G+S NV T+N LI   +R G
Sbjct: 359 GMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
               A  L  EM   GI  DV TYN+LIGA C  G +  A++L DEM   G+ P+ +TY 
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            +I+G C +GN+K A E+  +++      + + + +  K + ++ + D+A D+  + L
Sbjct: 479 TIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 182/382 (47%), Gaps = 6/382 (1%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R  +++   PD+ T N +++ LC+IG L KA  V +++     +P+ ATYN+ I GYC+ 
Sbjct: 180 RSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKK 239

Query: 202 NELDKALH---LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
                  H   L   M   GI P  VT  +L++  CK      AV+   E+     G A 
Sbjct: 240 GGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM--KQQGIAA 297

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           S V+T   L+      G   + + L  +M    +  + + +  ++ GFC  G ++ A  +
Sbjct: 298 S-VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDW 356

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
              M +R   PDV+ YN L++   + GK+++A      ++K G++P+  +Y  +I G   
Sbjct: 357 IDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR 416

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            GD   A   L  M EK +  +   +NV+I      G++  A  + D M   G+  N  T
Sbjct: 417 SGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLT 476

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N +I      G+I  A+ ++  M       +V TYN+ I   C +G +  A  L +EML
Sbjct: 477 YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536

Query: 499 RRGITPDIITYTELIKGHCARG 520
            + + P+ ITY  + +G   +G
Sbjct: 537 DKCLVPNGITYETIKEGMMEKG 558



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 185/386 (47%), Gaps = 22/386 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCK---IGDLEKADHVIREMS 180
           VI  LC  G++  A  + + +   G  P V T+N L++  CK    G++   D +++EM 
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV 256

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   SP   T+   I GYC+ +    A+ +F  M   GI  + VT+N L+  LC +G + 
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVE 316

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           + VK + E+   +D   + + IT   ++  + K G    A    + M ++N++ D+V YN
Sbjct: 317 EGVKLMEEM---EDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYN 373

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI+ +   G +  A A    M K+G  P+V TYN L+    + G    AS     + + 
Sbjct: 374 ILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 433

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+  D ++Y  +I  LC  G++ KA + L  M E  + P    +N II G+   G++ +A
Sbjct: 434 GIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSA 493

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           + IR  M      +NV T+N  I    + G + +A  L  EML   + P+  TY      
Sbjct: 494 YEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYE----- 548

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDI 506
                       + + M+ +G TPDI
Sbjct: 549 -----------TIKEGMMEKGYTPDI 563



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 130/258 (50%), Gaps = 3/258 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC  GK+   + L  +M   G  P+ +T   ++   CK G +  A+  I  M+E 
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   YN  I  Y R+ +++ A+ +   MA  GI PN  T+N L+    + G    A
Sbjct: 364 NVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E+    +    +DV+T  +L+ +    G+  +A+ L ++M +  ++ + + YN +
Sbjct: 424 SGLLDEM---KEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I GFC  G+I SA+    +M K     +V+TYN  +   C+ GK+DEA+     +    +
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCL 540

Query: 363 APDQISYKTIIQGLCIHG 380
            P+ I+Y+TI +G+   G
Sbjct: 541 VPNGITYETIKEGMMEKG 558



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 5/141 (3%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  M++ G     +E D   +  +I  LC  G++  A+ L  +M + G  P+ LT+N ++
Sbjct: 427 LDEMKEKG-----IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTII 481

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
              C  G+++ A  +   M + R   N  TYN FI  +C++ ++D+A  L + M +  + 
Sbjct: 482 QGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLV 541

Query: 221 PNRVTHNILVHALCKKGLLGD 241
           PN +T+  +   + +KG   D
Sbjct: 542 PNGITYETIKEGMMEKGYTPD 562


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 227/449 (50%), Gaps = 6/449 (1%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D L+ M + G V C+   +   +  VI      G +  A  L ++M+Q+G  PD++T+N 
Sbjct: 206 DLLRMMAEGGAV-CS--PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNS 262

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           +V+ LCK   ++KA+  +R+M   R  PN  TYN  I GY    +  +A+ +F  M  + 
Sbjct: 263 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 322

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           I P+ VT ++L+ +LCK G + +A      +          DV +  I+++ Y   G   
Sbjct: 323 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ---NPDVFSYNIMLNGYATKGCLV 379

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
               L++ M    I  D   +NVLI  +   G +  A   F +M   G  PDV+TY T++
Sbjct: 380 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 439

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             LC+ GK+D+A   +  +   GVAPD+ +Y  +IQG C HG ++KA+E +  ++   + 
Sbjct: 440 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 499

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
            +   ++ II+   + G + +A +I DL ++ G+  +   +N L+      G +  A  +
Sbjct: 500 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRV 559

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
              M+  GI P+V  Y  L+   C +G I   L L+ EML+RGI P  I Y+ +I G   
Sbjct: 560 FDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFE 619

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G    A+  F ++   G+A+D   + I+
Sbjct: 620 AGRTVPAKMKFHEMTESGIAMDICTYNIV 648



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 222/466 (47%), Gaps = 53/466 (11%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP--SPNCATYNAFITGYCRVNELD 205
           G VPDV +++ L+  LC  G   +AD ++R M+E     SPN   YN  I G+ +  +++
Sbjct: 180 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 239

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           KA  LF  M   GI P+ VT+N +VHALCK   +  A  FL +++   + +   +  T  
Sbjct: 240 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV---NKRVLPNNWTYN 296

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            L+  Y   G   +A+ ++ +M + +I  D+V  ++L+   C  G I  A   F  M  +
Sbjct: 297 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 356

Query: 326 GFLPDVITYNTLLN------CLCKQ-----------------------------GKLDEA 350
           G  PDV +YN +LN      CL                                G LD+A
Sbjct: 357 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKA 416

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +  +   GV PD ++Y+T+I  LC  G +  A E    M+++ V P+ + +N +I G
Sbjct: 417 MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQG 476

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           +   G L  A  +   +++ G+  ++  F+++I    + G + DA ++    +  G+ PD
Sbjct: 477 FCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 536

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
              YN+L+   C +G +  AL+++D M+  GI P+++ Y  L+ G+C  G + E   +F 
Sbjct: 537 AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 596

Query: 531 KIQTLGLAIDHIPFRIL-------------KKRYRRMKESDKARDI 563
           ++   G+    I + I+             K ++  M ES  A DI
Sbjct: 597 EMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDI 642



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 189/359 (52%), Gaps = 2/359 (0%)

Query: 187 NCATYNAFITGYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           N    N  + G+C     D+AL  L       G  P+  +++IL+ +LC +G  G A   
Sbjct: 148 NIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 207

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L  ++A+     + +V+    ++D +FK GD  +A  L+ +M Q+ I  D+V YN +++ 
Sbjct: 208 L-RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 266

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C    +  A A+  QM+ +  LP+  TYN L+      G+  EA   +  + +  + PD
Sbjct: 267 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 326

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++   ++  LC +G I +AR+   +M  K   P+   +N++++GY   G L +   + D
Sbjct: 327 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 386

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
           LML  G++ + +TFN LI A    G +  A  +  EM   G+ PDV TY  +I A C +G
Sbjct: 387 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 446

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            +  A++ +++M+ +G+ PD   Y  LI+G C  G++ +A+E+ ++I   G+ +D + F
Sbjct: 447 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 505



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 186/406 (45%), Gaps = 7/406 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G  PD  T N L+      G L+KA  +  EM +    P+  TY   I   CR+ +
Sbjct: 388 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 447

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A+  F+ M + G+ P++  +N L+   C  G L  A + + E++  ++G     V  
Sbjct: 448 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM--NNGMHLDIVFF 505

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           S+I+ ++  K G    A  +++      +  D V YN+L++G+CL G +  A   F  M+
Sbjct: 506 SSII-NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 564

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  P+V+ Y TL+N  CK G++DE    +  + + G+ P  I Y  II GL   G  V
Sbjct: 565 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTV 624

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGY--GRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
            A+     M E  +  +   +N+++ G    RC D    F  ++L  +  V  N+ T N 
Sbjct: 625 PAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFD-EAIFLFKELR-AMNVKINIITLNT 682

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I    +   + +A  L   +    + P V TY+++I      G +  A  ++  M   G
Sbjct: 683 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 742

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             P+      +++    +  +  A    +KI     +++H+   +L
Sbjct: 743 CEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLL 788



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 142/293 (48%), Gaps = 3/293 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I +LC  G++  A  +    +  G  PD + +N L++  C +G +EKA  V   M   
Sbjct: 507 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 566

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   Y   + GYC++  +D+ L LF  M   GI+P+ + ++I++  L + G    A
Sbjct: 567 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPA 626

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+   + G A  D+ T  I++   FKN    +A+ L+ ++   N++ +I+  N +
Sbjct: 627 KMKFHEM--TESGIAM-DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 683

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G      +  A   F  + +   +P V+TY+ ++  L K+G ++EA   +  +   G 
Sbjct: 684 IDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 743

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            P+      +++ L    +IV+A  +L  + E++   E     +++D +   G
Sbjct: 744 EPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 796



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 126/242 (52%), Gaps = 7/242 (2%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT---GVAPDQISYKT 371
           A A+F Q+L+ G   ++I  N LL   C+  + DEA     +L +T   G  PD  SY  
Sbjct: 133 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI--LLHRTPELGCVPDVFSYSI 190

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLS 429
           +++ LC  G   +A + L  M E   V  P++  +N +IDG+ + GD++ A  +   M+ 
Sbjct: 191 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 250

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+  ++ T+N+++ A  +  ++  A +  ++M+   + P+ +TYN LI    + G    
Sbjct: 251 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 310

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A++++ EM R  I PD++T + L+   C  G +KEA +VF  +   G   D   + I+  
Sbjct: 311 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 370

Query: 550 RY 551
            Y
Sbjct: 371 GY 372



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/244 (20%), Positives = 106/244 (43%), Gaps = 3/244 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   +E +   +  ++   C  G+I   L L R+M+Q+G  P  + ++ +++ L + G  
Sbjct: 564 VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRT 623

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A     EM+E   + +  TYN  + G  +    D+A+ LF  +    ++ N +T N +
Sbjct: 624 VPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 683

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  + +   + +A      +      +    V+T +I++ +  K G   +A  +++ M  
Sbjct: 684 IDGMFQTRRVEEAKDLFASI---SRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQN 740

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
              + +    N ++       +I  A AY  ++ +R F  + +T   L++    +G   E
Sbjct: 741 AGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 800

Query: 350 ASHF 353
              F
Sbjct: 801 QIRF 804



 Score = 38.9 bits (89), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 43/97 (44%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
           VP V+T++ ++  L K G +E+A+ +   M      PN    N  +    + NE+ +A  
Sbjct: 709 VPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGA 768

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
             S +         +T  +LV     KG   + ++FL
Sbjct: 769 YLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 805


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 214/418 (51%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +IR LC+ GKIG AL L  KM  +G  PDVLT+  L+N LCK+G+   A   +R M + 
Sbjct: 129 TLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQR 188

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P    Y+  I   C+  +L +AL LFS M   GI PN  T++ L+H LC  G   +A
Sbjct: 189 NCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEA 248

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++    ++     K   D +T   L+D+  K G   +A  + + M Q +++ D+V YN L
Sbjct: 249 IRLFYAMIHR---KIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSL 305

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G CL  ++      F  M+++G +P VI+Y TL+N  CK   +D+A   +  +S+ G+
Sbjct: 306 MDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGL 365

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y T+I GLC  G +  A      M+    +P+   + ++ D   +   L+ A  
Sbjct: 366 IPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMV 425

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +  ++    +  ++  ++ ++    R G +  A  L  ++   G+ PDV TY ++I   C
Sbjct: 426 LLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLC 485

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             G +  A +L+ EM   G +P+  TY  + +G         A ++F ++ + G +ID
Sbjct: 486 QQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSID 543



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 228/470 (48%), Gaps = 38/470 (8%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T L L ++M   G   +  T N L+N  C +  L  A  V+ ++ ++   P+ AT+   I
Sbjct: 72  TVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLI 131

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   ++ +AL LF  M   G +P+ +T+  L++ LCK G    A++FL  +   +  
Sbjct: 132 RGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSM---EQR 188

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
                V+  + ++DS  K+    +AL+L++DM  K I  +   Y+ LI+G C+ G    A
Sbjct: 189 NCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEA 248

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F  M+ R  +PD +T+NTL++ LCK+G + +A +   V+ ++ + PD ++Y +++ G
Sbjct: 249 IRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDG 308

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C+  ++ K      +M+ K  VP    +  +I+GY +   +  A  + + M   G+  +
Sbjct: 309 HCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPD 368

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL------------------ 477
             T+N LI      G + DA +L  EM++ G  PD+ TY +L                  
Sbjct: 369 TVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLK 428

Query: 478 -----------------IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
                            +   C  G +  A  L+ ++  +G+ PD+ TYT +I G C +G
Sbjct: 429 VIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQG 488

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            + EA ++F ++   G + +   + ++ + + R  E+ +A  + Q+ L R
Sbjct: 489 LLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSR 538



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 193/382 (50%), Gaps = 3/382 (0%)

Query: 166 IGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
           +  ++ A  +   M  MRP P+   ++  +T   R+      L L+  M + GI  N  T
Sbjct: 32  VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
            NIL+++ C    LG A   LG++L      +T+   T T L+      G   +AL L++
Sbjct: 92  LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTA---TFTTLIRGLCVEGKIGEALQLFD 148

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M  +  Q D++ Y  LING C  G+ S+A  +   M +R   P V+ Y+T+++ LCK  
Sbjct: 149 KMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDR 208

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           +L EA   +  +   G++P+  +Y ++I GLCI G   +A     +M+ + ++P+   +N
Sbjct: 209 QLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFN 268

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            ++D   + G +  A  + D+M+   +  +V T+N+L+        +    ++   M+  
Sbjct: 269 TLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK 328

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G  P V +Y  LI   C +  +  A+ L++EM ++G+ PD +TY  LI G C  G +++A
Sbjct: 329 GCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDA 388

Query: 526 EEVFAKIQTLGLAIDHIPFRIL 547
             +F ++   G   D + +RIL
Sbjct: 389 IALFHEMVVYGQIPDLVTYRIL 410



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 205/433 (47%), Gaps = 3/433 (0%)

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           I  AL L  +M++    P ++  + L+  + ++        + ++M       N  T N 
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            I  +C +N L  A  +   +   G +P+  T   L+  LC +G +G+A++   ++  + 
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
                 DV+T   L++   K G+   A+     M Q+N +  +V Y+ +I+  C +  ++
Sbjct: 155 ---FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A + F  ML +G  P+  TY++L++ LC  G   EA   +  +    + PDQ+++ T++
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
             LC  G +VKA   +  M++  + P+   +N ++DG+    ++    ++ D M+  G  
Sbjct: 272 DALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCV 331

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            +V ++  LI    +   +  A  L +EM   G+ PD  TYN LI   C++G +  A+ L
Sbjct: 332 PSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 391

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           + EM+  G  PD++TY  L    C    + EA  +   I+   L  D   + I+     R
Sbjct: 392 FHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCR 451

Query: 554 MKESDKARDIHQK 566
             E + ARD+  K
Sbjct: 452 AGELEAARDLFSK 464



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 139/298 (46%), Gaps = 12/298 (4%)

Query: 84  QAVFNAL-DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDL----CLGGKIGTAL 138
           Q  FN L D + KE +     ++    V   +++D +  V     L    CL  ++G  +
Sbjct: 264 QLTFNTLVDALCKEGM----VVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTV 319

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            +   M++KG VP V+++  L+N  CKI  ++KA  +  EMS+    P+  TYN  I G 
Sbjct: 320 NVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGL 379

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           C V  L  A+ LF  M   G  P+ VT+ IL   LCK   L +A+  L  +   +     
Sbjct: 380 CHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVI---EGTNLD 436

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            D+   +I+MD   + G+   A  L++ +  K +  D+  Y ++ING C  G ++ A   
Sbjct: 437 PDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKL 496

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           F +M + G  P+  TYN +     +  +   A   +  +   G + D  +   +++ L
Sbjct: 497 FGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEML 554


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 222/438 (50%), Gaps = 6/438 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           +R L   G++   L    +MI +G +PDV+    L+   C+ G   KA  ++  +     
Sbjct: 114 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGA 173

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+  TYN  I GYC+  E+DKAL +   M+   + P+ VT+N ++ +LC  G L +A++
Sbjct: 174 VPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAME 230

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L   +  +      DVIT TIL+++   +    QA+ L ++M +K  + D+V YNVLIN
Sbjct: 231 VLDRQMQRE---CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G +  A  +   M   G  P+VIT+N +L  +C  G+  +A      + + G +P
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
             +++  +I  LC    + +A + L  M +   +P    +N ++ G+ +   +  A    
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           ++M+S G   ++ T+N L+ A  + G    A  +  ++   G  P + TYN +I     +
Sbjct: 408 EIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 467

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G    A +L +EM R+G+ PDIITY+ L++G    G + EA ++F  ++ L +    + +
Sbjct: 468 GKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTY 527

Query: 545 RILKKRYRRMKESDKARD 562
             +     + +++ +A D
Sbjct: 528 NAIMLGLCKAQQTSRAID 545



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 199/427 (46%), Gaps = 24/427 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G+I  AL +  +M      PDV+T+N ++  LC  G L++A  V+    +  
Sbjct: 183 LIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRE 239

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY   I   C  + + +A+ L   M   G +P+ VT+N+L++ +CK+G L +A+
Sbjct: 240 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAI 299

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           KFL  +          +VIT  I++ S    G    A  L  DM +K     +V +N+LI
Sbjct: 300 KFLNNMPLYG---CQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILI 356

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           N  C    +  A     +M K G +P+ ++YN LL+  C++ K+D A  +  ++   G  
Sbjct: 357 NFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCY 416

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y T++  LC  G    A E L  +  K   P    +N +IDG  + G    A  +
Sbjct: 417 PDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAEL 476

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   G+  ++ T++ L+      G + +A  +  +M    I P   TYN ++   C 
Sbjct: 477 LEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCK 536

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKG----------------HCARGNMKE--A 525
                 A+     M+ +G  P   TYT LI+G                 C+RG +K+  A
Sbjct: 537 AQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIADEGLAEEALELLNELCSRGFVKKSSA 596

Query: 526 EEVFAKI 532
           E+V  K+
Sbjct: 597 EQVAVKM 603



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 189/391 (48%), Gaps = 6/391 (1%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N  + +L + G+LE+    +  M      P+     + I G+CR  +  KA  +   + N
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
           +G  P+ +T+N+L+   CK G +  A++ L  +          DV+T   ++ S   +G 
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERM------SVAPDVVTYNTILRSLCDSGK 224

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A+ + +   Q+    D++ Y +LI   C +  +  A     +M K+G  PDV+TYN 
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L+N +CK+G+LDEA  F   +   G  P+ I++  I++ +C  G  + A   L  ML K 
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P    +N++I+   R   L  A  + + M   G   N  ++N L+    +   +  A 
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAI 404

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
              + M+  G +PD+ TYN L+ A C  G    A+++ +++  +G +P +ITY  +I G 
Sbjct: 405 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGL 464

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
              G  + A E+  +++  GL  D I +  L
Sbjct: 465 TKVGKTEYAAELLEEMRRKGLKPDIITYSTL 495



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 168/358 (46%), Gaps = 12/358 (3%)

Query: 211 FSTMANNGIRPNR----VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
             + + NG+  +R       NI +  L + G L + +KFL  ++   D     DVI  T 
Sbjct: 91  MESSSPNGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGD---IPDVIACTS 147

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR- 325
           L+  + ++G   +A  +   +       D++ YNVLI G+C +G+I  A     Q+L+R 
Sbjct: 148 LIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKAL----QVLERM 203

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
              PDV+TYNT+L  LC  GKL EA        +    PD I+Y  +I+  C    + +A
Sbjct: 204 SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQA 263

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            + L  M +K   P+   +NV+I+G  + G L  A    + M  +G   NV T N ++ +
Sbjct: 264 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRS 323

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
               G   DA  L  +ML  G  P V T+N+LI   C    +  A+ + ++M + G  P+
Sbjct: 324 MCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPN 383

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            ++Y  L+ G C    M  A E    + + G   D + +  L     +  ++D A +I
Sbjct: 384 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEI 441



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 128/257 (49%), Gaps = 5/257 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  ++R +C  G+   A  L   M++KG  P V+T N L+N LC+   L +A  V+ +M 
Sbjct: 317 HNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP 376

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  +YN  + G+C+  ++D+A+     M + G  P+ VT+N L+ ALCK G   
Sbjct: 377 KHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKAD 436

Query: 241 DAVKFLGEVLADDDGKATSDV-ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            AV+ L ++      K  S V IT   ++D   K G    A  L  +M +K ++ DI+ Y
Sbjct: 437 AAVEILNQL----SSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITY 492

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           + L+ G    G +  A   F  M      P  +TYN ++  LCK  +   A  F   + +
Sbjct: 493 STLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVE 552

Query: 360 TGVAPDQISYKTIIQGL 376
            G  P + +Y  +I+G+
Sbjct: 553 KGCKPTKATYTILIEGI 569



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 127/270 (47%), Gaps = 3/270 (1%)

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
           A N+ +     NG++     +  +M+ +G +PDVI   +L+   C+ GK  +A+    +L
Sbjct: 109 ASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEIL 168

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
             +G  PD I+Y  +I G C  G+I KA + L  M   SV P+   +N I+      G L
Sbjct: 169 ENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKL 225

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             A  + D  +      +V T+  LI A      +  A  L  EM   G  PDV TYN+L
Sbjct: 226 KEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVL 285

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I   C  G +  A++  + M   G  P++IT+  +++  C+ G   +AE + A +   G 
Sbjct: 286 INGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGC 345

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           +   + F IL     R +   +A D+ +K 
Sbjct: 346 SPSVVTFNILINFLCRKRLLGRAIDVLEKM 375


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 215/415 (51%), Gaps = 11/415 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI   C   ++  AL +  KM++ G  PD +T   LVN  C+   +  A  ++ +M E+ 
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   YNA I   C+   ++ A   F  +   GIRPN VT+  LV+ LC      DA 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L +++     K T +VIT + L+D++ KNG   +A  L+ +M + +I  DIV Y+ LI
Sbjct: 246 RLLSDMIKK---KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG CL+  I  A   F  M+ +G L DV++YNTL+N  CK  ++++    +  +S+ G+ 
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            + ++Y T+IQG    GD+ KA+EF   M    + P+   +N+++ G    G+L  A  I
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M    +  ++ T+  +I    + G + +A+SL   + L G+ PD+ TY  ++   C 
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            G +H    LY +M + G+  +  T ++        G++  + E+  K+ + G A
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLSCGYA 529



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 220/447 (49%), Gaps = 8/447 (1%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D+ L + +D    M  + P    +  D+ R ++ I  L    K    + L +KM   G  
Sbjct: 63  DIKLNDAIDLFSDMVKSRPFPSIV--DFNRLLSAIVKL---KKYDVVISLGKKMEVLGIR 117

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
            D+ T N ++N  C    +  A  ++ +M ++   P+  T  + + G+CR N +  A+ L
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   G +P+ V +N ++ +LCK   + DA  F  E+   +      +V+T T L++ 
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI---ERKGIRPNVVTYTALVNG 234

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
              +     A  L +DM +K I  +++ Y+ L++ F  NG +  A   F +M++    PD
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           ++TY++L+N LC   ++DEA+  + ++   G   D +SY T+I G C    +    +   
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M ++ +V     +N +I G+ + GD+  A      M  FG+S +++T+N L+      G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +  A  + ++M    +  D+ TY  +I   C  G +  A  L+  +  +G+ PDI+TYT
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGL 537
            ++ G C +G + E E ++ K++  GL
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 213/415 (51%), Gaps = 9/415 (2%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI---REMSEMRPSPNCA 189
           K+  A+ L   M++    P ++  N L++ + K   L+K D VI   ++M  +    +  
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVK---LKKYDVVISLGKKMEVLGIRNDLY 121

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           T+N  I  +C   ++  AL +   M   G  P+RVT   LV+  C++  + DAV  + ++
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +   +     D++    ++DS  K      A   + ++ +K I+ ++V Y  L+NG C +
Sbjct: 182 V---EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
              S A      M+K+   P+VITY+ LL+   K GK+ EA   +  + +  + PD ++Y
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            ++I GLC+H  I +A +    M+ K  + +   +N +I+G+ +   + +   +   M  
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+ SN  T+N LI    + G +  A     +M   GI PD++TYN+L+G  C+ G +  
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           AL ++++M +R +  DI+TYT +I+G C  G ++EA  +F  +   GL  D + +
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/379 (23%), Positives = 175/379 (46%), Gaps = 38/379 (10%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           L  A  +  +M + RP P+   +N  ++   ++ + D  + L   M   GIR +  T NI
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           +++  C    +  A+  LG+                                      M 
Sbjct: 126 VINCFCCCFQVSLALSILGK--------------------------------------ML 147

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           +   + D V    L+NGFC    +S A +   +M++ G+ PD++ YN +++ LCK  +++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           +A  F+  + + G+ P+ ++Y  ++ GLC       A   L  M++K + P    ++ ++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           D + + G +  A  + + M+   +  ++ T+++LI        I +A  +   M+  G  
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
            DV +YN LI   C    +   ++L+ EM +RG+  + +TY  LI+G    G++ +A+E 
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387

Query: 529 FAKIQTLGLAIDHIPFRIL 547
           F+++   G++ D   + IL
Sbjct: 388 FSQMDFFGISPDIWTYNIL 406



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 170/364 (46%), Gaps = 38/364 (10%)

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +L+ A+ LFS M  +   P+ V  N L+ A+ K                        DV+
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKL--------------------KKYDVV 104

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
            S          G K + L + ND++          +N++IN FC    +S A +   +M
Sbjct: 105 ISL---------GKKMEVLGIRNDLY---------TFNIVINCFCCCFQVSLALSILGKM 146

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           LK G+ PD +T  +L+N  C++ ++ +A      + + G  PD ++Y  II  LC    +
Sbjct: 147 LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV 206

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A +F   +  K + P    +  +++G       S+A  +   M+   ++ NV T++AL
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           + A  + G + +A  L +EM+   I PD+ TY+ LI   C    I  A Q++D M+ +G 
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             D+++Y  LI G C    +++  ++F ++   GL  + + +  L + + +  + DKA++
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386

Query: 563 IHQK 566
              +
Sbjct: 387 FFSQ 390


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 222/449 (49%), Gaps = 17/449 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  L   G+  T   +   M+ +G  P+V+T+  L++  C+ GD  KA  +  EM E +
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P    Y   I G C  + + +A  +F TM N+G+ PN  T+N ++   CK   +  A+
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+L D       +V+T  IL+D   K  +   A     DM    +  +I  YN LI
Sbjct: 284 ELYQEMLGDG---LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+C  G++S A +   ++ K   LPDV TY+ L+  LC   +++EA      + K G  
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y T+I G C  G++ KA E    M EK + P    ++ +IDGY + G +  A  +
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+  G+  +V  + ALI    + G+  +AF L KEM   G+ P+VFT + LI   C 
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520

Query: 484 LGHIHLALQLY-------------DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
            G I  A++L+             +E+ R   +P+ + YT LI+G C  G + +A + F+
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580

Query: 531 KIQTLGLAIDHIP-FRILKKRYRRMKESD 558
            ++  GL  D      I++  +R M   D
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRD 609



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 217/443 (48%), Gaps = 16/443 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G    A  L  +MI+K   P V+ +  L+  LC    + +A+ + R M    
Sbjct: 199 LIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSG 258

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYN  + GYC++  + KAL L+  M  +G+ PN VT  IL+  LCK   +  A 
Sbjct: 259 MLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSAR 318

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           KFL ++ +        ++     L+D Y K G+  +AL+L +++ +  I  D+  Y++LI
Sbjct: 319 KFLIDMASFG---VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILI 375

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C    +  A     +M K+GFLP+ +TYNTL++  CK+G +++A      +++ G+ 
Sbjct: 376 KGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIE 435

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ I++ T+I G C  G +  A      M+ K ++P+   +  +IDG+ + G+   AF +
Sbjct: 436 PNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRL 495

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL-----------KKEMLLDGIF--PD 470
              M   G+  NVFT + LI    + G I DA  L            K   LD     P+
Sbjct: 496 HKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPN 555

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
              Y  LI   C  G I  A + + +M   G+ PD+ T   +I+GH    ++++   + A
Sbjct: 556 HVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQA 615

Query: 531 KIQTLGLAIDHIPFRILKKRYRR 553
            I  +G+  +   +R+L K Y  
Sbjct: 616 DILKMGIIPNSSVYRVLAKGYEE 638



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 189/398 (47%), Gaps = 6/398 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  ALW+  KM     +P +   N +++ L K G  +    V  +M     SPN  TY
Sbjct: 140 GLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTY 196

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I G CR  +  KA  LF  M    I P  V + IL+  LC +  + +A      +  
Sbjct: 197 GTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM-- 254

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     ++ T   +MD Y K     +AL L+ +M    +  ++V + +LI+G C   +
Sbjct: 255 -RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDE 313

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           + SA  +   M   G +P++  YN L++  CK G L EA   +  + K  + PD  +Y  
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSI 373

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I+GLC    + +A   L  M +K  +P    +N +IDGY + G++  A  +   M   G
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N+ TF+ LI    + G +  A  L  EM++ G+ PDV  Y  LI      G+   A 
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +L+ EM   G+ P++ T + LI G C  G + +A ++F
Sbjct: 494 RLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 205/393 (52%), Gaps = 8/393 (2%)

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           +V+  +   + +PN   +   I  +  +  +++AL ++  M    + P     N+++  L
Sbjct: 114 NVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGL 168

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            KKG      K  G+++A     A+ +V+T   L+D   + GD  +A  L+++M +K I 
Sbjct: 169 VKKGRFDTMWKVYGDMVARG---ASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF 225

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             +V Y +LI G C    IS A + F  M   G LP++ TYNT+++  CK   + +A   
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  +   G+ P+ +++  +I GLC   ++V AR+FL+ M    VVP   ++N +IDGY +
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G+LS A S+   +    +  +VFT++ LI        + +A  L +EM   G  P+  T
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN LI   C  G++  A+++  +M  +GI P+IIT++ LI G+C  G M+ A  ++ ++ 
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             GL  D + +  L   + +   + +A  +H++
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKE 498



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 203/437 (46%), Gaps = 20/437 (4%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +IR LC   +I  A  + R M   G +P++ T+N +++  CKI  ++KA  + +EM 
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  T+   I G C+ +E+  A      MA+ G+ PN   +N L+   CK G L 
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+    E+   +  +   DV T +IL+          +A  L  +M +K    + V YN
Sbjct: 351 EALSLHSEI---EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G+C  G++  A     QM ++G  P++IT++TL++  CK GK++ A   Y  +   
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ PD ++Y  +I G    G+  +A      M E  + P     + +IDG  + G +S+A
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA 527

Query: 421 FSIRDLMLSFGV---------------SSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
             I+  +   G                S N   + ALI      G IF A     +M   
Sbjct: 528 --IKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCS 585

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G+ PDVFT  ++I       H+   + L  ++L+ GI P+   Y  L KG+   G +K A
Sbjct: 586 GLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSA 645

Query: 526 EEVFAKIQTLGLAIDHI 542
                 +  +G+   ++
Sbjct: 646 LRCSEDLSGIGIGCSNL 662



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 182/366 (49%), Gaps = 12/366 (3%)

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA--VKFLGEVLADDDGKATSDVITST 265
            ++ S + ++   PN     +L+ A  + GL+ +A  V +  +VL          +    
Sbjct: 113 FNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMDVLPA--------MQACN 162

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           +++D   K G       ++ DM  +    ++V Y  LI+G C  GD   AF  F +M+++
Sbjct: 163 MVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEK 222

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
              P V+ Y  L+  LC + ++ EA   +  +  +G+ P+  +Y T++ G C    + KA
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E    ML   ++P    + ++IDG  +  ++ +A      M SFGV  N+F +N LI  
Sbjct: 283 LELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G++ +A SL  E+    I PDVFTY++LI   C +  +  A  L  EM ++G  P+
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            +TY  LI G+C  GNM++A EV +++   G+  + I F  L   Y +  + + A  ++ 
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 566 KWLLRN 571
           + +++ 
Sbjct: 463 EMVIKG 468


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 212/418 (50%), Gaps = 35/418 (8%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P   + N L+  L     ++ A+   R     R SP+  T+N  I+G CR+ +L KA  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              +   G+ P+  T+N L+   CKKG                                 
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKG--------------------------------- 240

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
               G+ +    L  +M +  I    V + VLING+C N + ++A   F +M ++G    
Sbjct: 241 --GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+TYN+L++ LC +GK++E       +   G++P++I++  +++G C  G +  A +++ 
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M E++V P+  I+N++ID Y R G + +A ++++ M   G+S NV T+N LI   +R G
Sbjct: 359 GMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
               A  L  EM   GI  DV TYN+LIGA C  G +  A++L DEM   G+ P+ +TY 
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            +I+G C +GN+K A E+  +++      + + + +  K + ++ + D+A D+  + L
Sbjct: 479 TIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 182/382 (47%), Gaps = 6/382 (1%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R  +++   PD+ T N +++ LC+IG L KA  V +++     +P+ ATYN+ I GYC+ 
Sbjct: 180 RSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKK 239

Query: 202 NELDKALH---LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
                  H   L   M   GI P  VT  +L++  CK      AV+   E+     G A 
Sbjct: 240 GGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM--KQQGIAA 297

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           S V+T   L+      G   + + L  +M    +  + + +  ++ GFC  G ++ A  +
Sbjct: 298 S-VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDW 356

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
              M +R   PDV+ YN L++   + GK+++A      ++K G++P+  +Y  +I G   
Sbjct: 357 IDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR 416

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            GD   A   L  M EK +  +   +NV+I      G++  A  + D M   G+  N  T
Sbjct: 417 SGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLT 476

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N +I      G+I  A+ ++  M       +V TYN+ I   C +G +  A  L +EML
Sbjct: 477 YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536

Query: 499 RRGITPDIITYTELIKGHCARG 520
            + + P+ ITY  + +G   +G
Sbjct: 537 DKCLVPNGITYETIKEGMMEKG 558



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 185/386 (47%), Gaps = 22/386 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCK---IGDLEKADHVIREMS 180
           VI  LC  G++  A  + + +   G  P V T+N L++  CK    G++   D +++EM 
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV 256

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   SP   T+   I GYC+ +    A+ +F  M   GI  + VT+N L+  LC +G + 
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVE 316

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           + VK + E+   +D   + + IT   ++  + K G    A    + M ++N++ D+V YN
Sbjct: 317 EGVKLMEEM---EDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYN 373

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI+ +   G +  A A    M K+G  P+V TYN L+    + G    AS     + + 
Sbjct: 374 ILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 433

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+  D ++Y  +I  LC  G++ KA + L  M E  + P    +N II G+   G++ +A
Sbjct: 434 GIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSA 493

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           + IR  M      +NV T+N  I    + G + +A  L  EML   + P+  TY      
Sbjct: 494 YEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYE----- 548

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDI 506
                       + + M+ +G TPDI
Sbjct: 549 -----------TIKEGMMEKGYTPDI 563



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 130/258 (50%), Gaps = 3/258 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC  GK+   + L  +M   G  P+ +T   ++   CK G +  A+  I  M+E 
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   YN  I  Y R+ +++ A+ +   MA  GI PN  T+N L+    + G    A
Sbjct: 364 NVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSA 423

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E+    +    +DV+T  +L+ +    G+  +A+ L ++M +  ++ + + YN +
Sbjct: 424 SGLLDEM---KEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I GFC  G+I SA+    +M K     +V+TYN  +   C+ GK+DEA+     +    +
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCL 540

Query: 363 APDQISYKTIIQGLCIHG 380
            P+ I+Y+TI +G+   G
Sbjct: 541 VPNGITYETIKEGMMEKG 558



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 5/141 (3%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  M++ G     +E D   +  +I  LC  G++  A+ L  +M + G  P+ LT+N ++
Sbjct: 427 LDEMKEKG-----IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTII 481

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
              C  G+++ A  +   M + R   N  TYN FI  +C++ ++D+A  L + M +  + 
Sbjct: 482 QGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLV 541

Query: 221 PNRVTHNILVHALCKKGLLGD 241
           PN +T+  +   + +KG   D
Sbjct: 542 PNGITYETIKEGMMEKGYTPD 562


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 218/438 (49%), Gaps = 6/438 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           +R L   G++         M+ +G +PD++    L+  LCK G   KA  V+  + +   
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+  TYN  I+GYC+  E+  AL L   M+   + P+ VT+N ++  LC  G L +A++
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAME 233

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L   +  +      DVIT TIL+++  K     QA+ L ++M  K  + D+V YNVLIN
Sbjct: 234 VLDRQMQRE---CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 290

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G +  A  +   M   G  P+VIT+N +L  +C  G+  +A  F   + + G +P
Sbjct: 291 GICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSP 350

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
             +++  +I  LC  G I +A + L  M +    P    +N ++    +   +  A    
Sbjct: 351 SVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYL 410

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           D+M+S G   ++ T+N L+ A  + G +  A  +  ++   G  P + TYN +I     +
Sbjct: 411 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKV 470

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G    A++L DEM  +G+ PDIITY+ L+ G    G + EA   F  ++ +G+  + I +
Sbjct: 471 GKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITY 530

Query: 545 RILKKRYRRMKESDKARD 562
             +     + +++ +A D
Sbjct: 531 NSIMLGLCKARQTVRAID 548



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 220/455 (48%), Gaps = 19/455 (4%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           ++ + D+G V      D   +  +I   C  G+IG+AL L  +M      PDV+T+N ++
Sbjct: 168 MEILEDSGAV-----PDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTIL 219

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
             LC  G L++A  V+    +    P+  TY   I   C+ + + +A+ L   M + G +
Sbjct: 220 RTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCK 279

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P+ VT+N+L++ +CK+G L +A++FL  + +        +VIT  I++ S    G    A
Sbjct: 280 PDVVTYNVLINGICKEGRLDEAIRFLNHMPSYG---CQPNVITHNIILRSMCSTGRWMDA 336

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
                +M +K     +V +N+LIN  C  G I  A     +M + G  P+ ++YN LL+ 
Sbjct: 337 EKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHA 396

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           LCK  K++ A  +  ++   G  PD ++Y T++  LC  G +  A E L  +  K   P 
Sbjct: 397 LCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPV 456

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +N +IDG  + G   +A  + D M   G+  ++ T++ L+   +R G + +A +   
Sbjct: 457 LITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFH 516

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           ++   G+ P+  TYN ++   C       A+     M+ RG  P   +Y  LI+G    G
Sbjct: 517 DLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEG 576

Query: 521 NMKEAEEVFAKIQTLGL--------AIDHIPFRIL 547
             KEA E+  ++ + G+         +  IPF + 
Sbjct: 577 LAKEALELLNELCSRGVVKKSSAEQVVVKIPFNVF 611



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 183/415 (44%), Gaps = 32/415 (7%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R ++  D   +  ++R LC  GK+  A+ +  + +Q+   PDV+T+  L+   CK   + 
Sbjct: 205 RMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVG 264

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  ++ EM +    P+  TYN  I G C+   LD+A+   + M + G +PN +THNI++
Sbjct: 265 QAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIIL 324

Query: 231 HALCKKGLLGDAVKFLGEVLADD--------------------DGKA------------T 258
            ++C  G   DA KFL E++                        G+A            T
Sbjct: 325 RSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCT 384

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            + ++   L+ +  K+    +A+   + M  +    DIV YN L+   C +G +  A   
Sbjct: 385 PNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 444

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             Q+  +G  P +ITYNT+++ L K GK D+A      +   G+ PD I+Y T++ GL  
Sbjct: 445 LNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSR 504

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G + +A  F   + E  V P    +N I+ G  +      A      M++ G      +
Sbjct: 505 EGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETS 564

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
           +  LI      G   +A  L  E+   G+        +++    N+ + +  L L
Sbjct: 565 YMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVKIPFNVFYFYFLLHL 619



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 124/258 (48%), Gaps = 3/258 (1%)

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           NG++   F +   M+ RG +PD+I   +L+  LCK GK  +A+    +L  +G  PD I+
Sbjct: 123 NGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVIT 182

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I G C  G+I  A + L  M   SV P+   +N I+      G L  A  + D  +
Sbjct: 183 YNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQM 239

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
                 +V T+  LI A  +   +  A  L  EM   G  PDV TYN+LI   C  G + 
Sbjct: 240 QRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLD 299

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A++  + M   G  P++IT+  +++  C+ G   +AE+  A++   G +   + F IL 
Sbjct: 300 EAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILI 359

Query: 549 KRYRRMKESDKARDIHQK 566
               R     +A D+ +K
Sbjct: 360 NFLCRKGLIGRAIDVLEK 377


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 205/401 (51%), Gaps = 4/401 (0%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           IR LC  G++  A+ L   M +   VPDV+T+N L+  LCK    ++A H +R M     
Sbjct: 231 IRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 289

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+  TYN  I GYC+++ + +A  L       G  P++VT+  L++ LC +G +  A++
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 349

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              E  A        D++    L+      G    AL + N+M ++    DI  YN++IN
Sbjct: 350 LFNEAQAKG---IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 406

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G+IS A       + +G+LPDV T+NTL++  CK+ KLD A      + + G+AP
Sbjct: 407 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 466

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D I+Y +++ GLC  G + +  E    M+ K   P P  +N++I+ + R   +  A  + 
Sbjct: 467 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 526

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
             M   G+  +  +FN LI    R G +  A+ L +++   G      T+N LIGA    
Sbjct: 527 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 586

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            ++H+A +++DEML +G   D  TY  LI G C   N+  A
Sbjct: 587 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRA 627



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 204/390 (52%), Gaps = 3/390 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR LC       A+   R+M+ +G +PD  T+N +++  CKI  +++A  ++++     
Sbjct: 264 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 323

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY + I G C   ++++AL LF+     GI+P+ V +N LV  LC +GL+  A+
Sbjct: 324 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 383

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + + E+  +       D+ T  I+++   K G+   A  + ND   K    D+  +N LI
Sbjct: 384 QVMNEMAEEG---CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 440

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+C    + SA     +M + G  PD ITYN++LN LCK GK++E +  +  +   G  
Sbjct: 441 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH 500

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ I+Y  +I+  C    + +A + ++ M ++ + P+   +N +I G+ R GDL  A+ +
Sbjct: 501 PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLL 560

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              +   G S+   TFN LI A +   ++  A  +  EML  G   D +TY +LI  SC 
Sbjct: 561 FQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCK 620

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELI 513
             ++  A     EM+++G  P + T+  +I
Sbjct: 621 TANVDRAYMHLVEMIKKGFIPSMSTFGRVI 650



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 213/453 (47%), Gaps = 8/453 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   H   +R  CL  +   AL L R +  +G V     +  +V  L   G    A 
Sbjct: 119 VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV----AYCTVVCGLYAHGHTHDAR 174

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  +M      PN A +N  +   C+  ++ +A  L   +   G+  N  T+NI +  L
Sbjct: 175 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 234

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C+ G L +AV+ +  + A     A  DV+T   L+    K     +A+     M  +   
Sbjct: 235 CEAGRLPEAVRLVDGMRA----YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 290

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D   YN +I+G+C    +  A       + +GF+PD +TY +L+N LC +G ++ A   
Sbjct: 291 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 350

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +      G+ PD + Y ++++GLC+ G I+ A + +  M E+   P+   +N++I+G  +
Sbjct: 351 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 410

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G++S+A  + +  +  G   +VFTFN LI    +   +  A  L + M   GI PD  T
Sbjct: 411 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 470

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN ++   C  G ++   + + EM+ +G  P+ ITY  LI+  C    M+EA +V  K+ 
Sbjct: 471 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 530

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             GL  D + F  L   + R  + + A  + QK
Sbjct: 531 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 563



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 198/413 (47%), Gaps = 8/413 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E +  L+ M + G     L  D+  +  +I   C    +  A  L +  + KG VPD +
Sbjct: 275 QEAMHYLRRMMNQG----CLPDDFTYNT-IIDGYCKISMVQEATELLKDAVFKGFVPDQV 329

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  L+N LC  GD+E+A  +  E       P+   YN+ + G C    +  AL + + M
Sbjct: 330 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 389

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
           A  G  P+  T+NI+++ LCK G + DA   + + +         DV T   L+D Y K 
Sbjct: 390 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG---YLPDVFTFNTLIDGYCKR 446

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
                AL L   M++  I  D + YN ++NG C  G ++     F +M+ +G  P+ ITY
Sbjct: 447 LKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITY 506

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N L+   C+  K++EAS     +S+ G+ PD +S+ T+I G C +GD+  A      + E
Sbjct: 507 NILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 566

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K        +N +I  +    ++  A  I D MLS G  ++ +T+  LI    +  ++  
Sbjct: 567 KGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDR 626

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           A+    EM+  G  P + T+  +I +      +  A+ +   M++ G+ P+++
Sbjct: 627 AYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 679



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 183/429 (42%), Gaps = 45/429 (10%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+  G  PD+ TH   +   C    L    H+   +    P      Y   + G     
Sbjct: 113 RMLAAGVSPDLHTHTIRLRSFC----LTARPHIALRLLRALPHRGAVAYCTVVCGLYAHG 168

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
               A  LF  M +  + PN    N ++HALCK+G                         
Sbjct: 169 HTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRG------------------------- 203

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
                        D  +A  L   + Q+ +  ++  YN+ I G C  G +  A      M
Sbjct: 204 -------------DVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM 250

Query: 323 LKRGF-LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
             R + +PDV+TYNTL+  LCK+    EA H+   +   G  PD  +Y TII G C    
Sbjct: 251 --RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 308

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + +A E L   + K  VP+   +  +I+G    GD+  A  + +   + G+  ++  +N+
Sbjct: 309 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 368

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           L+      G I  A  +  EM  +G  PD+ TYN++I   C +G+I  A  + ++ + +G
Sbjct: 369 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 428

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
             PD+ T+  LI G+C R  +  A ++  ++   G+A D I +  +     +  + ++  
Sbjct: 429 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 488

Query: 562 DIHQKWLLR 570
           +  Q+ +L+
Sbjct: 489 ETFQEMILK 497


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 222/437 (50%), Gaps = 6/437 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+ G A  L  +M ++G  PDV+T+N +++ LCK   ++KA+ V+R+M+     P+  TY
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY 338

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GY  +  L +A  +F  M + G+ PN V  N  + +LCK G   +A +    + A
Sbjct: 339 NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   D+++   L+  Y   G     + L+N M    I  D   +N+LI+ +   G 
Sbjct: 399 KGH---KPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGM 455

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F +M ++G  PDV+TY+T+++   + G+L +A   +  +   G+ P+   Y +
Sbjct: 456 VDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHS 515

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLS 429
           IIQG C+HG +VKA+E +  M+ K  +P P I  +N +I+   + G + +A  I DL+  
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKG-IPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTD 574

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G   +V TF +LI      G +  AF +   M + G+  D+ TY+ L+      G I+ 
Sbjct: 575 IGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIND 634

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
            L L+ EM R+G+ P+ +TY  ++ G    G    A + F ++   G  +    + I+  
Sbjct: 635 GLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILG 694

Query: 550 RYRRMKESDKARDIHQK 566
              R   +D+A  + QK
Sbjct: 695 GLCRNNCADEAIILFQK 711



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 200/407 (49%), Gaps = 4/407 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++  A  + RKM  +G +P+++  N  +  LCK G  ++A  +   M+     P+  +Y
Sbjct: 349 GRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSY 408

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              + GY         + LF++M +NGI  +    NIL+HA  K+G++ DA+    E+  
Sbjct: 409 CTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEM-- 466

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                 + DV+T + ++ ++ + G    A+  +N M  + IQ +   Y+ +I GFC++G 
Sbjct: 467 -QQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGG 525

Query: 312 ISSAFAYFCQMLKRGF-LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           +  A     +M+ +G   PD++ +N+++N LCK G++ +A   + +++  G  PD I++ 
Sbjct: 526 LVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFT 585

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           ++I G C+ G + KA + L +M    V  +   ++ ++DGY + G +++  ++   M   
Sbjct: 586 SLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRK 645

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV  N  T+  ++    R G    A     EM+  G    V  Y +++G  C       A
Sbjct: 646 GVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEA 705

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           + L+ ++    +   I     +I         +EA+E+FA I   GL
Sbjct: 706 IILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGL 752



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 184/356 (51%), Gaps = 2/356 (0%)

Query: 190 TYNAFITGYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
           T +  +   C  N  ++A++ L   M+  G  PN  +++I++  LC   +   A+    +
Sbjct: 194 TASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLF-Q 252

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           ++A + G  + +V+    ++  +FK G+  +A +L+++M ++ ++ D+V YN++I+  C 
Sbjct: 253 MMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCK 312

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
              +  A     QM   G  PD +TYN +++     G+L EA+  +  +   G+ P+ + 
Sbjct: 313 ARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVI 372

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
             + +  LC HG   +A E   SM  K   P+   +  ++ GY   G  ++   + + M 
Sbjct: 373 CNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMK 432

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           S G++++   FN LI A  + G + DA  +  EM   G+ PDV TY+ +I A   +G + 
Sbjct: 433 SNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLT 492

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            A++ +++M+ RGI P+   Y  +I+G C  G + +A+E+ +++   G+    I F
Sbjct: 493 DAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVF 548



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/395 (23%), Positives = 179/395 (45%), Gaps = 2/395 (0%)

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
           + L   M   G   D    N L++   K G ++ A  +  EM +   SP+  TY+  I+ 
Sbjct: 425 IGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISA 484

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
           + R+  L  A+  F+ M   GI+PN   ++ ++   C  G L  A + + E++  + G  
Sbjct: 485 FSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMI--NKGIP 542

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
             D++    +++S  K+G    A  +++ +     + D++ +  LI+G+CL G +  AF 
Sbjct: 543 RPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFK 602

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
               M   G   D++TY+TLL+   K G++++    +  + + GV P+ ++Y  ++ GL 
Sbjct: 603 ILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLF 662

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G  V AR+    M+E        I+ +I+ G  R      A  +   + +  V  ++ 
Sbjct: 663 RAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSIT 722

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
             N +I A  +     +A  L   +   G+ P+  TY ++I      G +  A  ++  M
Sbjct: 723 ILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSM 782

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            + GI P       +I+    +G + +A    +K+
Sbjct: 783 EKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV 817



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 101/429 (23%), Positives = 179/429 (41%), Gaps = 21/429 (4%)

Query: 160 VNELCKIGDLEKAD--HVIREM-SEMRPSPNCATYNAFITGYCRVNELDK--------AL 208
             E  + G L + D  H+  E+  +  P P   + N F+T   R              AL
Sbjct: 79  ATERVRAGTLSRDDAHHMFDELFRQATPVPG-RSLNGFLTALARATSSSACITDGPALAL 137

Query: 209 HLFSTMANNGIRPNRV-----THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            LF+ +      P  V     T++IL+   C+       +   G +L    G     +  
Sbjct: 138 ALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCIL--RTGLKIHQITA 195

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           ST+L    + N  +     L + M +     ++ +Y++++ G C N     A   F  M 
Sbjct: 196 STLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMA 255

Query: 324 KRGFL--PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           K G    P+V+ YNT+++   K+G+  +A   +  +++ GV PD ++Y  II  LC    
Sbjct: 256 KEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + KA   L  M      P+   +N +I GY   G L  A  +   M S G+  N+   N+
Sbjct: 316 MDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNS 375

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
            + +  + G   +A  +   M   G  PD+ +Y  L+    + G     + L++ M   G
Sbjct: 376 FLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNG 435

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
           I  D   +  LI  +  RG + +A  +F ++Q  G++ D + +  +   + RM     A 
Sbjct: 436 IAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAM 495

Query: 562 DIHQKWLLR 570
           +   + + R
Sbjct: 496 EKFNQMVAR 504



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/329 (22%), Positives = 144/329 (43%), Gaps = 39/329 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           ++I+  C+ G +  A  L  +MI KG   PD++  N ++N LCK G +  A  +   +++
Sbjct: 515 SIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTD 574

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
           +   P+  T+ + I GYC V ++DKA  +   M   G+  + VT++ L+    K G + D
Sbjct: 575 IGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIND 634

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
            +    E+          + +T  I++   F+ G    A   +++M +      +  Y +
Sbjct: 635 GLTLFREM---QRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGI 691

Query: 302 LINGFCLN-------------GDISSAFA----------------------YFCQMLKRG 326
           ++ G C N             G ++  F+                       F  +   G
Sbjct: 692 ILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASG 751

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            LP+  TY  ++  L K G +++A++ +  + K+G+ P       II+ L   G+I KA 
Sbjct: 752 LLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAG 811

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +L  +  K ++ E    ++++  + R G
Sbjct: 812 NYLSKVDGKRILLEASTTSLMLSLFSRKG 840



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 15/242 (6%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +ETD   +  ++      G+I   L L R+M +KG  P+ +T+  ++  L + G    A 
Sbjct: 612 VETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAAR 671

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
               EM E   +   + Y   + G CR N  D+A+ LF  +    ++ +    N +++A+
Sbjct: 672 KKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAM 731

Query: 234 CKKGLLGDAVKFLGEVLADD--DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            K     +A +    + A      ++T  V+   +L D   ++          N+MF   
Sbjct: 732 YKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDA---------NNMFSSM 782

Query: 292 IQTDIVA----YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            ++ IV      N +I      G+I+ A  Y  ++  +  L +  T + +L+   ++GK 
Sbjct: 783 EKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKY 842

Query: 348 DE 349
            E
Sbjct: 843 HE 844


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 210/418 (50%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LCL GK   A+ L  KM++ G  P+ +T+  ++N +CK G    A  ++R+M E 
Sbjct: 198 TLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +   Y+  I G C+   LD A +LF+ M   GI  N +T+NIL+   C  G   D 
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K L +++     K   +V+T ++L+DS+ K G   +A  L  +M  + I  D + Y  L
Sbjct: 318 AKLLRDMIKR---KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC    +  A      M+ +G  P++ T+N L+N  CK  ++D+    +  +S  GV
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D ++Y T+IQG C  G +  A+E    M+ + V P    + +++DG    G+   A  
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I + +    +  ++  +N +I        + DA+ L   + L G+ P V TYN++IG  C
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             G +  A  L+ +M   G  PD  TY  LI+ H   G+  ++ ++  +++  G ++D
Sbjct: 555 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 612



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 209/404 (51%), Gaps = 3/404 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            L L ++M  KG   ++ T + ++N  C+   L  A   + ++ ++   PN  T++  I 
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLIN 166

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C    + +AL L   M   G +P+ +T N LV+ LC  G   +A+  + +++   +  
Sbjct: 167 GLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV---EYG 223

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              + +T   +++   K+G    A+ L   M ++NI+ D V Y+++I+G C +G + +AF
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F +M  +G   ++ITYN L+   C  G+ D+ +     + K  + P+ +++  +I   
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
              G + +A E    M+ + + P+   +  +IDG+ +   L  A  + DLM+S G   N+
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            TFN LI    +   I D   L ++M L G+  D  TYN LI   C LG +++A +L+ E
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           M+ R + P+I+TY  L+ G C  G  ++A E+F KI+   + +D
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 219/457 (47%), Gaps = 44/457 (9%)

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           R LCL      A     K+I+ G  P+ +T + L+N LC  G + +A  ++  M EM   
Sbjct: 137 RKLCL------AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  T N  + G C   +  +A+ L   M   G +PN VT+  +++ +CK G    A++ 
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L ++   ++     D +  +I++D   K+G    A  L+N+M  K I T+I+ YN+LI G
Sbjct: 251 LRKM---EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           FC  G           M+KR   P+V+T++ L++   K+GKL EA   +  +   G+APD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            I+Y ++I G C    + KA + +  M+ K   P    +N++I+GY +   + +   +  
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   GV ++  T+N LI      G +  A  L +EM+   + P++ TY +L+   C+ G
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487

Query: 486 HIHLALQLYDEMLR-----------------------------------RGITPDIITYT 510
               AL++++++ +                                   +G+ P + TY 
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +I G C +G + EAE +F K++  G A D   + IL
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 584



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 191/403 (47%), Gaps = 6/403 (1%)

Query: 171 KADHVI---REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           KAD  I   R+M   RP P    ++   +   +  + D  L L   M   GI  N  T +
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           I+++  C+   L  A   +G+++         + IT + L++     G   +AL L + M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLG---YEPNTITFSTLINGLCLEGRVSEALELVDRM 184

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            +   + D++  N L+NG CL+G  + A     +M++ G  P+ +TY  +LN +CK G+ 
Sbjct: 185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
             A      + +  +  D + Y  II GLC HG +  A      M  K +      +N++
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I G+   G   +   +   M+   ++ NV TF+ LI +  + G + +A  L KEM+  GI
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PD  TY  LI   C   H+  A Q+ D M+ +G  P+I T+  LI G+C    + +  E
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +F K+   G+  D + +  L + +  + + + A+++ Q+ + R
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 184/400 (46%), Gaps = 38/400 (9%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D  ++  +I  LC  G +  A  L  +M  KG   +++T+N L+   C  G  +   
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++R+M + + +PN  T++  I  + +  +L +A  L   M + GI P+ +T+  L+   
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+  L  A + +                                      + M  K   
Sbjct: 379 CKENHLDKANQMV--------------------------------------DLMVSKGCD 400

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +I  +N+LING+C    I      F +M  RG + D +TYNTL+   C+ GKL+ A   
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  +    V P+ ++YK ++ GLC +G+  KA E    + +  +  +  I+N+II G   
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              + +A+ +   +   GV   V T+N +I    + G + +A  L ++M  DG  PD +T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           YN+LI A    G    +++L +E+ R G + D  T   +I
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 228/509 (44%), Gaps = 46/509 (9%)

Query: 105 RDTGPVRCTLETDYRRHVAV--------IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           RD    +   E   RR  A+        I  LC  G +  A   + +M+  G  PD  T+
Sbjct: 257 RDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTY 316

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
             L+N LCK   L++A  ++ EMS     PN   Y   + G+ +  +  +A  +   M +
Sbjct: 317 GALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMIS 376

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G++PN++ ++ L+  LCK G LG A K L E++         D  T   LM  +F+  D
Sbjct: 377 AGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG---LRPDTFTYNPLMQGHFQQHD 433

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD------------------------- 311
           K  A  L N+M    I  ++ +Y ++ING C NG+                         
Sbjct: 434 KDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAP 493

Query: 312 ----------ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
                     IS A     +M K    PD+  YN+L+  L   G+++EA  +Y  + K G
Sbjct: 494 LIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRG 553

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD+ +Y  +I G C  G++ KA + L  ML   + P    +  +++GY +  D     
Sbjct: 554 LVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVS 613

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           SI   ML  G   +   +  +I   +R  ++  AF +  E+  +G+ PD+  Y+ LI   
Sbjct: 614 SILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGL 673

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C +  +  A+ L DEM + G+ P I+ Y  LI G C  G++  A  VF  I   GL  + 
Sbjct: 674 CKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNC 733

Query: 542 IPFRILKKRYRRMKESDKARDIHQKWLLR 570
           + +  L     +  +   A D++++ L R
Sbjct: 734 VTYTALIDGNCKNGDITDAFDLYKEMLDR 762



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 213/416 (51%), Gaps = 3/416 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK   A  + ++MI  G  P+ + ++ L+  LCKIG L +A  +++EM ++   P+  TY
Sbjct: 362 GKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTY 421

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  + G+ + ++ D A  L + M N+GI PN  ++ I+++ LC+ G   +A   L E+++
Sbjct: 422 NPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMIS 481

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
           +       +      L+  + K G+   A      M + N+  D+  YN LI G    G 
Sbjct: 482 EG---LKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGR 538

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A  Y+ Q+ KRG +PD  TY+ L++  CK G L++A      +  +G+ P+  +Y  
Sbjct: 539 MEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTD 598

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +++G     D  K    L SML     P+ HI+ ++I    R  ++  AF +   +   G
Sbjct: 599 LLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNG 658

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  ++  +++LI    +   +  A  L  EM  +G+ P +  YN LI   C  G I  A 
Sbjct: 659 LVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRAR 718

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            ++D +L +G+ P+ +TYT LI G+C  G++ +A +++ ++   G+A D   + +L
Sbjct: 719 NVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVL 774



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 194/383 (50%), Gaps = 3/383 (0%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  TY+ FI  +C+  + D A  +F  M       N VT+N+++  LC+ G + +A  F
Sbjct: 241 PDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 300

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             E++   D   + D  T   LM+   K     +A AL ++M    ++ +IV Y  L++G
Sbjct: 301 KEEMV---DYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDG 357

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           F   G  + AF    +M+  G  P+ I Y+ L+  LCK G+L  AS     + K G+ PD
Sbjct: 358 FMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPD 417

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
             +Y  ++QG     D   A E L  M    ++P  + + ++I+G  + G+   A ++ +
Sbjct: 418 TFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLE 477

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M+S G+  N F +  LI+  ++ G+I  A    ++M    + PD+F YN LI     +G
Sbjct: 478 EMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVG 537

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  A + Y ++ +RG+ PD  TY+ LI G+C  GN+++A+++  ++   GL  +   + 
Sbjct: 538 RMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYT 597

Query: 546 ILKKRYRRMKESDKARDIHQKWL 568
            L + Y +  + +K   I Q  L
Sbjct: 598 DLLEGYFKSNDYEKVSSILQSML 620



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 202/424 (47%), Gaps = 4/424 (0%)

Query: 138 LW-LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           LW L+  M   G +PDV T++  +   CK  D + A  V  EM     + N  TYN  I+
Sbjct: 227 LWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMIS 286

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G CR   +++A      M + G+ P+  T+  L++ LCK   L +A   L E+       
Sbjct: 287 GLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSG--- 343

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              +++    L+D + K G   +A  +  +M    +Q + + Y+ LI G C  G +  A 
Sbjct: 344 LKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRAS 403

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M+K G  PD  TYN L+    +Q   D A      +  +G+ P+  SY  +I GL
Sbjct: 404 KLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGL 463

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C +G+  +A   L  M+ + + P   ++  +I G+ + G++S A    + M    V  ++
Sbjct: 464 CQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDL 523

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           F +N+LI   +  G + +A     ++   G+ PD FTY+ LI   C  G++  A QL  +
Sbjct: 524 FCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQ 583

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           ML  G+ P+  TYT+L++G+    + ++   +   +   G   D+  + I+ +   R + 
Sbjct: 584 MLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSEN 643

Query: 557 SDKA 560
            + A
Sbjct: 644 MEVA 647



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 207/436 (47%), Gaps = 45/436 (10%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           ++  DH  R      PSP+ A  +  +  Y +   +  A  +   MA+ G+ P R   N 
Sbjct: 159 IQDTDHRSRS-----PSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNG 213

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKAT-SDVITSTILMDSYFKNGDKFQALALWNDM 287
           L+  L    L  DA++ L ++    +G     DV T +  ++++ K  D   A  ++ +M
Sbjct: 214 LLKDL----LRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEM 269

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            +++   + V YNV+I+G C +G +  AF +  +M+  G  PD  TY  L+N LCK  +L
Sbjct: 270 RRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRL 329

Query: 348 DEASHF---------------YGVL-------SKT-------------GVAPDQISYKTI 372
            EA                  YG L        KT             GV P++I Y  +
Sbjct: 330 KEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNL 389

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I+GLC  G + +A + L  M++  + P+   +N ++ G+ +  D   AF + + M + G+
Sbjct: 390 IRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGI 449

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             NV+++  +I    + G   +A +L +EM+ +G+ P+ F Y  LI      G+I LA +
Sbjct: 450 LPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACE 509

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
             ++M +  + PD+  Y  LIKG    G M+EAEE +A++Q  GL  D   +  L   Y 
Sbjct: 510 ALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYC 569

Query: 553 RMKESDKARDIHQKWL 568
           +    +KA  + ++ L
Sbjct: 570 KTGNLEKADQLLRQML 585



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 157/335 (46%), Gaps = 37/335 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I+ L   G++  A     ++ ++G VPD  T++ L++  CK G+LEKAD ++R+M   
Sbjct: 528 SLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNS 587

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY   + GY + N+ +K   +  +M  +G +P+   + I++  L +   +  A
Sbjct: 588 GLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVA 647

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L EV   +      D+   + L+    K  D  +A+ L ++M ++ ++  IV YN L
Sbjct: 648 FMVLTEV---EKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNAL 704

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC +GDIS A   F  +L +G +P+ +TY  L++  CK G + +A   Y  +   G+
Sbjct: 705 IDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGI 764

Query: 363 APDQISY----------------------------------KTIIQGLCIHGDIVKAREF 388
           APD   Y                                   T++ G C  G + +  + 
Sbjct: 765 APDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKL 824

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           L  M+++ +VP       ++  +G+ G L  A  +
Sbjct: 825 LHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRV 859



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 172/402 (42%), Gaps = 39/402 (9%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I  A     KM +    PD+  +N L+  L  +G +E+A+    ++ +    P+  TY
Sbjct: 502 GNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTY 561

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  I GYC+   L+KA  L   M N+G++PN  T+  L+    K          L  +L 
Sbjct: 562 SGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLG 621

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             D     D     I++ +  ++ +   A  +  ++ +  +  D+  Y+ LI+G C   D
Sbjct: 622 SGD---KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIAD 678

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A     +M K G  P ++ YN L++  C+ G +  A + +  +   G+ P+ ++Y  
Sbjct: 679 MEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTA 738

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G C +GDI  A +    ML++ + P+  ++NV+  G     DL  A  + + M + G
Sbjct: 739 LIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG 798

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
            + NV  FN                                    L+   C  G +    
Sbjct: 799 YA-NVSLFNT-----------------------------------LVHGFCKRGKLQETE 822

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +L   M+ R I P+  T  +++      G + EA  VFA++Q
Sbjct: 823 KLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQ 864



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 4/254 (1%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           + M+  G  PD   +  ++  L +  ++E A  V+ E+ +    P+   Y++ I+G C++
Sbjct: 617 QSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKI 676

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            +++KA+ L   MA  G+ P  V +N L+   C+ G +  A      +LA        + 
Sbjct: 677 ADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKG---LVPNC 733

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T T L+D   KNGD   A  L+ +M  + I  D   YNVL  G     D+  A     +
Sbjct: 734 VTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEE 793

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M  RG+  +V  +NTL++  CK+GKL E      V+    + P+  + + ++      G 
Sbjct: 794 MFNRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGK 852

Query: 382 IVKAREFLLSMLEK 395
           + +A      + +K
Sbjct: 853 LGEAHRVFAELQQK 866



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 111/272 (40%), Gaps = 44/272 (16%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLE-----TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           I+  NL R + M     V   +E      D   + ++I  LC    +  A+ L  +M ++
Sbjct: 633 IVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKE 692

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P ++ +N L++  C+ GD+ +A +V   +      PNC TY A I G C+  ++  A
Sbjct: 693 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDA 752

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L+  M + GI P+   +N+L                             SD       
Sbjct: 753 FDLYKEMLDRGIAPDAFVYNVLA-------------------------TGCSDA------ 781

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
                   D  QAL L  +MF +    ++  +N L++GFC  G +         M+ R  
Sbjct: 782 -------ADLEQALFLTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREI 833

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           +P+  T   +++   K GKL EA   +  L +
Sbjct: 834 VPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQ 865



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 1/140 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I   C  G I  A  L ++M+ +G  PD   +N L        DLE+A  +  EM 
Sbjct: 736 YTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMF 795

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
             R   N + +N  + G+C+  +L +   L   M +  I PN  T   +V    K G LG
Sbjct: 796 N-RGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLG 854

Query: 241 DAVKFLGEVLADDDGKATSD 260
           +A +   E+      ++ +D
Sbjct: 855 EAHRVFAELQQKKASQSATD 874


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 219/434 (50%), Gaps = 3/434 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++  L+        +I  LC  G+   A+ L   M+ KG  PDV T+N ++N LCKIG+ 
Sbjct: 155 IKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGET 214

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A  ++++M E    PN  TY+  I   CR   +++AL +FS M   GI P+  T+  L
Sbjct: 215 AAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSL 274

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LCK     +A   L E+ + +      D++T  +L+D++ K G   +AL +   M +
Sbjct: 275 IQGLCKFSRWKEASALLNEMTSLN---IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTE 331

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             ++ ++V Y+ L+ G+ L  D+  A   F  M+ +G  P++ +YN L+N  CK  ++DE
Sbjct: 332 MGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDE 391

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   +  +   G+ P+ +SY T+I G C  G + +A++   +M     +P+   +++++D
Sbjct: 392 AMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLD 451

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G+ + G L  AF +   M S  +  N+  +  L+ A  + G+  DA  L  E+ + G+ P
Sbjct: 452 GFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQP 511

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            V  Y  +I   C  G +  AL+ +  M   G  PD I+Y  +I+G     +   A  + 
Sbjct: 512 HVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLV 571

Query: 530 AKIQTLGLAIDHIP 543
            +++  G   D  P
Sbjct: 572 GEMRDRGFIADVRP 585



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 213/408 (52%), Gaps = 3/408 (0%)

Query: 130 LGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCA 189
           +G      + L ++M   G  P++ T +  +N  C++  ++    V+ ++ ++   P   
Sbjct: 105 MGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIV 164

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           T+   I G C+V E  +A+ LF  M   G +P+  T+N +++ LCK G    A   L ++
Sbjct: 165 TFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKM 224

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
              ++     +++T + L+DS  ++    +AL +++ M  K I  DI  Y  LI G C  
Sbjct: 225 ---EEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKF 281

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
                A A   +M     +PD++T+N L++  CK+GK+ EA      +++ GV P+ ++Y
Sbjct: 282 SRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTY 341

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            +++ G  +  D+V+AR+    M+ K   P    +N++I+GY +   +  A  + + M+ 
Sbjct: 342 SSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIH 401

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G++ N  ++N LI    + G + +A  L + M  +G  PD+FTY++L+   C  G++  
Sbjct: 402 QGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGK 461

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           A +L+  M    + P+++ YT L+   C  GN K+A ++F+++   GL
Sbjct: 462 AFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGL 509



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 206/418 (49%), Gaps = 3/418 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           K+I+ G  P ++T   L+N LCK+G+  +A  +  +M      P+  TYN  I G C++ 
Sbjct: 153 KVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIG 212

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           E   A  L   M   G +PN VT++ L+ +LC+  L+ +A+     + A      + D+ 
Sbjct: 213 ETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKG---ISPDIF 269

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T T L+    K     +A AL N+M   NI  DIV +NVL++ FC  G +S A      M
Sbjct: 270 TYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTM 329

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            + G  P+V+TY++L+        + EA   + V+   G  P+  SY  +I G C    I
Sbjct: 330 TEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRI 389

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A +    M+ + + P    +N +I G+ + G L  A  +   M + G   ++FT++ L
Sbjct: 390 DEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSIL 449

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +    + G +  AF L + M    + P++  Y +L+ A C  G+   A +L+ E+  +G+
Sbjct: 450 LDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGL 509

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            P +  YT +I G C  G + EA E F  ++  G   D I + ++ +   + K+  +A
Sbjct: 510 QPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRA 567



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 208/417 (49%), Gaps = 43/417 (10%)

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI---REMSEMRPSPNCAT 190
           I  AL     M+ +  +P ++    L++ + K+G  +  D VI   ++M  +  SPN  T
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMG--QYYDVVISLSKQMELVGLSPNIYT 130

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
            + F+  +C++  +D    + + +   G++P  VT   L++ LC                
Sbjct: 131 LSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLC---------------- 174

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                                 K G+  QA+ L++DM  K  Q D+  YN +ING C  G
Sbjct: 175 ----------------------KVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIG 212

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           + ++A     +M + G  P+++TY+TL++ LC+   ++EA   +  +   G++PD  +Y 
Sbjct: 213 ETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYT 272

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           ++IQGLC      +A   L  M   +++P+   +NV++D + + G +S A  +   M   
Sbjct: 273 SLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEM 332

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV  NV T+++L+   +    + +A  L   M+  G  P++F+YN+LI   C    I  A
Sbjct: 333 GVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEA 392

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +QL++EM+ +G+TP+ ++Y  LI G C  G ++EA+++F  + T G   D   + IL
Sbjct: 393 MQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSIL 449



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 159/335 (47%), Gaps = 45/335 (13%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D ++ E LD    M+  G     +  D   + ++I+ LC   +   A  L  +M     +
Sbjct: 246 DRLVNEALDIFSYMKAKG-----ISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIM 300

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT-------------------- 190
           PD++T N LV+  CK G + +A  V++ M+EM   PN  T                    
Sbjct: 301 PDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKL 360

Query: 191 ---------------YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
                          YN  I GYC+   +D+A+ LF+ M + G+ PN V++N L+H  C+
Sbjct: 361 FHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQ 420

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G L +A      +  + +     D+ T +IL+D + K G   +A  L+  M    ++ +
Sbjct: 421 LGKLREAQDLFRNMCTNGN---LPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 477

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           +V Y +L++  C +G+   A   F ++  +G  P V  Y T++N LCK+G LDEA   + 
Sbjct: 478 LVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFR 537

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            +   G  PD+ISY  II+GL  H D  ++R  LL
Sbjct: 538 NMEADGCPPDEISYNVIIRGLLQHKD--ESRALLL 570



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 174/360 (48%), Gaps = 2/360 (0%)

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D AL  F+ M +    P  +    L+ A+ K G   D V  L + +  +    + ++ T
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQM--ELVGLSPNIYT 130

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            +I M+ + +        ++   + +  +Q  IV +  LING C  G+ + A   F  M+
Sbjct: 131 LSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMV 190

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            +G  PDV TYNT++N LCK G+   A+     + + G  P+ ++Y T+I  LC    + 
Sbjct: 191 AKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVN 250

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A +    M  K + P+   +  +I G  +      A ++ + M S  +  ++ TFN L+
Sbjct: 251 EALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLV 310

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G + +A  + K M   G+ P+V TY+ L+        +  A +L+  M+ +G  
Sbjct: 311 DTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCK 370

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P+I +Y  LI G+C    + EA ++F ++   GL  +++ +  L   + ++ +  +A+D+
Sbjct: 371 PNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDL 430



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 148/309 (47%), Gaps = 1/309 (0%)

Query: 261 VITSTILMDSYFKNGDKFQA-LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +I    L+ +  K G  +   ++L   M    +  +I   ++ +N FC    +   F+  
Sbjct: 92  IIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVL 151

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +++K G  P ++T+ TL+N LCK G+  +A   +  +   G  PD  +Y TII GLC  
Sbjct: 152 AKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKI 211

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G+   A   L  M E    P    ++ +ID   R   ++ A  I   M + G+S ++FT+
Sbjct: 212 GETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTY 271

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
            +LI    +     +A +L  EM    I PD+ T+N+L+   C  G +  AL +   M  
Sbjct: 272 TSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTE 331

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G+ P+++TY+ L+ G+    ++ EA ++F  + T G   +   + IL   Y + K  D+
Sbjct: 332 MGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDE 391

Query: 560 ARDIHQKWL 568
           A  +  + +
Sbjct: 392 AMQLFNEMI 400


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 215/415 (51%), Gaps = 11/415 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI   C   ++  AL +  KM++ G  PD +T   LVN  C+   +  A  ++ +M E+ 
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   YNA I   C+   ++ A   F  +   GIRPN VT+  LV+ LC      DA 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L +++     K T +VIT + L+D++ KNG   +A  L+ +M + +I  DIV Y+ L+
Sbjct: 246 RLLSDMIKK---KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLV 302

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG CL+  I  A   F  M+ +G L DV++YNTL+N  CK  ++++    +  +S+ G+ 
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            + ++Y T+IQG    GD+ KA+EF   M    + P+   +N+++ G    G+L  A  I
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M    +  ++ T+  +I    + G + +A+SL   + L G+ PD+ TY  ++   C 
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            G +H    LY +M + G+  +  T ++        G++  + E+  K+ + G A
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLSCGYA 529



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 220/447 (49%), Gaps = 8/447 (1%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D+ L + +D    M  + P    +  D+ R ++ I  L    K    + L +KM   G  
Sbjct: 63  DIKLNDAIDLFSDMVKSRPFPSIV--DFNRLLSAIVKL---KKYDVVISLGKKMEVLGIR 117

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
            D+ T N ++N  C    +  A  ++ +M ++   P+  T  + + G+CR N +  A+ L
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   G +P+ V +N ++ +LCK   + DA  F  E+   +      +V+T T L++ 
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI---ERKGIRPNVVTYTALVNG 234

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
              +     A  L +DM +K I  +++ Y+ L++ F  NG +  A   F +M++    PD
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           ++TY++L+N LC   ++DEA+  + ++   G   D +SY T+I G C    +    +   
Sbjct: 295 IVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M ++ +V     +N +I G+ + GD+  A      M  FG+S +++T+N L+      G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +  A  + ++M    +  D+ TY  +I   C  G +  A  L+  +  +G+ PDI+TYT
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGL 537
            ++ G C +G + E E ++ K++  GL
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 213/415 (51%), Gaps = 9/415 (2%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI---REMSEMRPSPNCA 189
           K+  A+ L   M++    P ++  N L++ + K   L+K D VI   ++M  +    +  
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVK---LKKYDVVISLGKKMEVLGIRNDLY 121

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           T+N  I  +C   ++  AL +   M   G  P+RVT   LV+  C++  + DAV  + ++
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +   +     D++    ++DS  K      A   + ++ +K I+ ++V Y  L+NG C +
Sbjct: 182 V---EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
              S A      M+K+   P+VITY+ LL+   K GK+ EA   +  + +  + PD ++Y
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            +++ GLC+H  I +A +    M+ K  + +   +N +I+G+ +   + +   +   M  
Sbjct: 299 SSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+ SN  T+N LI    + G +  A     +M   GI PD++TYN+L+G  C+ G +  
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           AL ++++M +R +  DI+TYT +I+G C  G ++EA  +F  +   GL  D + +
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 175/379 (46%), Gaps = 38/379 (10%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           L  A  +  +M + RP P+   +N  ++   ++ + D  + L   M   GIR +  T NI
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           +++  C    +  A+  LG+                                      M 
Sbjct: 126 VINCFCCCFQVSLALSILGK--------------------------------------ML 147

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           +   + D V    L+NGFC    +S A +   +M++ G+ PD++ YN +++ LCK  +++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           +A  F+  + + G+ P+ ++Y  ++ GLC       A   L  M++K + P    ++ ++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           D + + G +  A  + + M+   +  ++ T+++L+        I +A  +   M+  G  
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCL 327

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
            DV +YN LI   C    +   ++L+ EM +RG+  + +TY  LI+G    G++ +A+E 
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387

Query: 529 FAKIQTLGLAIDHIPFRIL 547
           F+++   G++ D   + IL
Sbjct: 388 FSQMDFFGISPDIWTYNIL 406



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 170/364 (46%), Gaps = 38/364 (10%)

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +L+ A+ LFS M  +   P+ V  N L+ A+ K                        DV+
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKL--------------------KKYDVV 104

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
            S          G K + L + ND++          +N++IN FC    +S A +   +M
Sbjct: 105 ISL---------GKKMEVLGIRNDLY---------TFNIVINCFCCCFQVSLALSILGKM 146

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           LK G+ PD +T  +L+N  C++ ++ +A      + + G  PD ++Y  II  LC    +
Sbjct: 147 LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV 206

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A +F   +  K + P    +  +++G       S+A  +   M+   ++ NV T++AL
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           + A  + G + +A  L +EM+   I PD+ TY+ L+   C    I  A Q++D M+ +G 
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGC 326

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             D+++Y  LI G C    +++  ++F ++   GL  + + +  L + + +  + DKA++
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386

Query: 563 IHQK 566
              +
Sbjct: 387 FFSQ 390


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 244/520 (46%), Gaps = 53/520 (10%)

Query: 88  NALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           +A+D++L+  +  L  M D     CT+         +++ LC   +   AL L   M   
Sbjct: 140 DAMDIVLRR-MTELSCMPDV--FSCTI---------LLKGLCDENRSQEALELLHMMADD 187

Query: 148 ---GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
              G+ PDV+++  ++N   K GD +KA     EM + R SP+  TY++ I   C+   +
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAM 247

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           DKA+ + +TM  NG+ PN +T+N ++H  C      +A+ FL ++ +D       DV+T 
Sbjct: 248 DKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG---VEPDVVTY 304

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG-------------- 310
             LMD   KNG   +A  +++ M ++ ++ DI  Y  L+ G+   G              
Sbjct: 305 NSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVR 364

Query: 311 ---------------------DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
                                 +  A   F +M + G  P+V+TY  ++  LCK G +D+
Sbjct: 365 NGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDD 424

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A  ++  +   G+ P+ I Y ++I  LCI     KA E +L ML++ +      +N II 
Sbjct: 425 AMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIH 484

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
            + + G +  +  + DLM+  GV  NV T++ LI      G + +A  L   M   G+ P
Sbjct: 485 SHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP 544

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D  TYN LI   C +  +  AL L+ EM+  G++P+IITY  +++G         A+E++
Sbjct: 545 DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 604

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
             I   G  ++   + I+     +   +D+A  + Q   L
Sbjct: 605 VGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 644



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 224/471 (47%), Gaps = 42/471 (8%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHVIREMSEMRPSPN 187
           C  G++         +++KG   + +T   L+  LC       A D V+R M+E+   P+
Sbjct: 98  CRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPD 157

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANN---GIRPNRVTHNILVHALCKKGLLGDAVK 244
             +    + G C  N   +AL L   MA++   G  P+ V++  +++   K+G    A  
Sbjct: 158 VFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYS 217

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              E+L   D + + DV+T + ++ +  K     +A+ +   M +  +  + + YN +++
Sbjct: 218 TYHEML---DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILH 274

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G+C +     A  +  +M   G  PDV+TYN+L++ LCK G+  EA   +  ++K G+ P
Sbjct: 275 GYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEP 334

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D  +Y T++QG    G +V+    L  M+   + P+ H++N++I  Y +   +  A  + 
Sbjct: 335 DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVF 394

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY---------- 474
             M   G++ NV T+ A+I    + GS+ DA    ++M+ +G+ P++  Y          
Sbjct: 395 SKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIF 454

Query: 475 -------------------------NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
                                    N +I + C  G +  + +L+D M+R G+ P++ITY
Sbjct: 455 DKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITY 514

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           + LI G+C  G M EA ++ + + ++G+  D + +  L   Y R+   D A
Sbjct: 515 STLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 202/417 (48%), Gaps = 4/417 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P V T+  L+   C+ G L+     +  + +        T+   + G C       A+ +
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 211 -FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
               M      P+  +  IL+  LC +    +A++ L  +  D  G +  DV++ T +++
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
            +FK GD  +A + +++M  + I  D+V Y+ +I   C    +  A      M+K G +P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           + +TYN++L+  C   +  EA  F   +   GV PD ++Y +++  LC +G   +AR+  
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
            SM ++ + P+   +  ++ GY   G L    ++ DLM+  G+  +   FN LI A  + 
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             + +A  +  +M   G+ P+V TY  +IG  C  G +  A+  +++M+  G+TP+II Y
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARDI 563
           T LI   C      +AEE+  ++   G+ ++ I F  +   +    R+ ES+K  D+
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDL 501



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 123/526 (23%), Positives = 223/526 (42%), Gaps = 102/526 (19%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI      G    A     +M+ +   PDV+T++ ++  LCK   ++KA  V+
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVL 254

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M +    PNC TYN+ + GYC   +  +A+     M ++G+ P+ VT+N L+  LCK 
Sbjct: 255 TTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKN 314

Query: 237 GLLGDAVKFLGEV----LADD--------DGKATSDVITS-------------------- 264
           G   +A K    +    L  D         G AT   +                      
Sbjct: 315 GRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVF 374

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
            IL+ +Y K     +A+ +++ M Q  +  ++V Y  +I   C +G +  A  YF QM+ 
Sbjct: 375 NILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMID 434

Query: 325 RGFLPDVITYNTLLNCLC-----------------------------------KQGKLDE 349
            G  P++I Y +L++ LC                                   K+G++ E
Sbjct: 435 EGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIE 494

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           +   + ++ + GV P+ I+Y T+I G C+ G + +A + L SM    + P+   +N +I+
Sbjct: 495 SEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN 554

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN----------------ALILAETRGGSIF 453
           GY R   + +A ++   M+S GVS N+ T+N                 L +  T+ G+  
Sbjct: 555 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQL 614

Query: 454 D-------------------AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +                   A  + + + L  +  +  T+N++IGA   +G    A  L+
Sbjct: 615 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 674

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
                 G+ P+  TY  + +    +G ++E +++F  ++  G  +D
Sbjct: 675 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVD 720



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 203/463 (43%), Gaps = 25/463 (5%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE D   +  +++     G +     L   M++ G  PD    N L+   C     EK D
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILI---CAYAKQEKVD 388

Query: 174 HVIREMSEMRP---SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
             +   S+MR    +PN  TY A I   C+   +D A+  F  M + G+ PN + +  L+
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           H+LC       A + + E+L  D G   + +  ++I+  S+ K G   ++  L++ M + 
Sbjct: 449 HSLCIFDKWDKAEELILEML--DRGICLNTIFFNSII-HSHCKEGRVIESEKLFDLMVRI 505

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            ++ +++ Y+ LI+G+CL G +  A      M   G  PD +TYNTL+N  C+  ++D+A
Sbjct: 506 GVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +  +  +GV+P+ I+Y  I+QGL        A+E  + + +     E   +N+I+ G
Sbjct: 566 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHG 625

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             +      A  +   +    +     TFN +I A  + G   +A  L      +G+ P+
Sbjct: 626 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPN 685

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
            +TY L+       G +    QL+  M   G T D      +++    RG +  A    +
Sbjct: 686 YWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 745

Query: 531 KI---------QTLGLAIDHIP-------FRILKKRYRRMKES 557
            I          T  L ID +         R L ++Y+   ES
Sbjct: 746 MIDEKHFSLEASTASLFIDLLSGGKYQEYHRFLPEKYKSFIES 788



 Score = 46.6 bits (109), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 4/119 (3%)

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG---IFPDVFTYN 475
           +A  + D +L  G  ++++  N   LA+    S   A S    M   G   + P V TY 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNR-ALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           +LIG  C  G + L       ++++G   + IT+T L+KG CA     +A ++  +  T
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 4/171 (2%)

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           V P  H + ++I    R G L   F+    ++  G      TF  L+          DA 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 457 SLK-KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR---GITPDIITYTEL 512
            +  + M      PDVF+  +L+   C+      AL+L   M      G  PD+++YT +
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           I G    G+  +A   + ++    ++ D + +  +     + +  DKA ++
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEV 253


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 217/418 (51%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC+ G+I  A+     ++ +G  P V TH  +VN LCKIG    A   +++M E+
Sbjct: 179 TLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVEL 238

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P   +Y+  I   C+   +++A+ LF  M + GI P  VT+N L++ +C  G    A
Sbjct: 239 DCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQA 298

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+L   +     DV+T +IL+D+  K G   +AL+++  M Q  ++ DIV Y+ L
Sbjct: 299 SILFKEML---EWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSL 355

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C +     +     +ML R   PDV+T++  ++  CK+G + EA     ++ + G+
Sbjct: 356 IHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGL 415

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ ++Y +++ G C+H  + +AR+    M+ K   P+   +N++I GY +   +  A  
Sbjct: 416 RPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQ 475

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M   G++ N  T   LI    + G  + A  L K+M   G  PD+ TY+ L+   C
Sbjct: 476 LFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFC 535

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             GH+  AL L++ + +  + P+ +    L+ G C  G +++A+E+F+ +    L  D
Sbjct: 536 KHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 219/421 (52%), Gaps = 3/421 (0%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           + RKM   G    V T   L+N LC +  +     V+ ++ ++   P+  T+N  I G C
Sbjct: 126 IYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLC 185

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
               + +A+     + + G +P   TH ++V+ LCK G    A+ ++ +++  D      
Sbjct: 186 IEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELD---CEP 242

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +V++ +I++DS  KN    +A+ L+  M    I   +V YN LI G C +G    A   F
Sbjct: 243 EVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILF 302

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +ML+    PDV+T++ L++ LCK+G + EA   +G + +  + PD ++Y ++I G+C  
Sbjct: 303 KEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKS 362

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
               ++   L  ML +++ P+   +++ +D + + G +S A SI +LM+  G+  NV T+
Sbjct: 363 SLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTY 422

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N+L+        + +A  +   M+  G  PDV +YN+LI   C    I  A QL+DEM  
Sbjct: 423 NSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSH 482

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
           +G+TP+ IT+T LI G C  G    A+E+F K+ + G   D I +  L   + +    D+
Sbjct: 483 KGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDE 542

Query: 560 A 560
           A
Sbjct: 543 A 543



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 199/410 (48%), Gaps = 6/410 (1%)

Query: 157 NYLVNELCKIGDLEKADHVI---REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           N+ V + CK G     D  +    +M  M P P    +N  +    R+   D  + ++  
Sbjct: 70  NFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRK 129

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G+  +  T  IL++ LC   L+G     LG++           +IT   L++    
Sbjct: 130 MEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLG---FKPSIITFNTLINGLCI 186

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +A+   + +  +  Q  +  + +++NG C  G  S+A  +  +M++    P+V++
Sbjct: 187 EGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVS 246

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y+ +++ LCK   ++EA   +  +   G++P  ++Y ++I G+C  G   +A      ML
Sbjct: 247 YSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEML 306

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           E ++ P+   +++++D   + G +  A S+   M+   +  ++ T+++LI    +     
Sbjct: 307 EWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWK 366

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           ++ +L  EML   I PDV T+++ +   C  G +  A  + + M+ RG+ P+++TY  L+
Sbjct: 367 ESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLM 426

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            G+C    M EA +VF  +   G A D + + IL K Y + +  D+A+ +
Sbjct: 427 DGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQL 476



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 180/357 (50%), Gaps = 3/357 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E +   +  +I  LC    +  A+ L   M   G  P V+T+N L+  +C  G  ++A  
Sbjct: 241 EPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASI 300

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           + +EM E    P+  T++  +   C+   + +AL +F  M    + P+ VT++ L+H +C
Sbjct: 301 LFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVC 360

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K  L  ++   L E+L+ +      DV+T +I +D + K G   +A ++ N M ++ ++ 
Sbjct: 361 KSSLWKESSTLLNEMLSRN---IRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRP 417

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++V YN L++G+CL+  +  A   F  M+ +G  PDV++YN L+   CK  ++DEA   +
Sbjct: 418 NVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLF 477

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +S  G+ P+ I++ T+I GLC  G    A+E    M      P+   ++ ++ G+ + 
Sbjct: 478 DEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKH 537

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
           G L  A ++ + +    +  N      L+    + G + DA  L   + ++ + PDV
Sbjct: 538 GHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 126/256 (49%), Gaps = 3/256 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++  +E D   + ++I  +C       +  L  +M+ +   PDV+T +  V+  CK G +
Sbjct: 341 IQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMV 400

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A  +I  M E    PN  TYN+ + GYC  +++D+A  +F  M N G  P+ +++NIL
Sbjct: 401 SEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNIL 460

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +   CK   + +A +   E+        T + IT T L+    + G  + A  L+  M  
Sbjct: 461 IKGYCKSERIDEAKQLFDEM---SHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGS 517

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
                D++ Y+ L++GFC +G +  A A F  + K    P+ +    LL  +CK GKL++
Sbjct: 518 HGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLED 577

Query: 350 ASHFYGVLSKTGVAPD 365
           A   +  LS   + PD
Sbjct: 578 AKELFSSLSIEELQPD 593


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 233/494 (47%), Gaps = 24/494 (4%)

Query: 60  VGDQCRS-KTRHWFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDY 118
           +G  CR+ + RH        N+ +P        L+    L + + +RD   V+   E   
Sbjct: 12  IGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLV--HGLSKARRLRDA--VQVLQEMVS 67

Query: 119 RRHV-------AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
            RHV        V++ LCLG ++  A  L  +M+ +G   + +T++ LV+ LCK   L++
Sbjct: 68  ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDE 127

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A  ++  M+E   +P   TYN+ ITG+CR   +D+A      M   G  P+ +T+  L+ 
Sbjct: 128 AVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIG 187

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
             CK   +G  ++ LGEV        T D++T + ++D   K G    A+ ++ +M   +
Sbjct: 188 GFCKSRDVGRGLELLGEVTRR---GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---S 241

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
                + YN LI G+C  GD+  A     +M+     PDV+TY TL++  CK G+LD+A 
Sbjct: 242 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAY 301

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
             +  +    ++PD +++ +++ GLC  G +  A E L  +  +   P  + +N ++DGY
Sbjct: 302 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGY 361

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG--IFP 469
            +   +  A  +     S G   N  T+N L+    R G    A     ++  +G     
Sbjct: 362 CKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPT 421

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            V  Y +++ A C  G    A+Q Y+EM++RG  P   T+  ++   C     ++A E+ 
Sbjct: 422 SVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELL 481

Query: 530 AKIQTLGLAIDHIP 543
            ++   G    H P
Sbjct: 482 EEMIKYG----HTP 491



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 203/410 (49%), Gaps = 7/410 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P  L HN ++  LC+ G L  A  V R+M++  P P+  TY   + G  +   L  A+ +
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M +    P+  T  ++V +LC    + DA + + E+L    G A ++ IT + L+D 
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEML--HRGMA-ANAITYSALVDG 118

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K     +A+AL   M ++     +V YN +I GFC    +  A  +  QM+  G  PD
Sbjct: 119 LCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPD 178

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           +ITY  L+   CK   +       G +++ G  PD ++Y T+I GLC  G +  A +   
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 238

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M   S  P    +N +I GY R GD+  A  +   M+    + +V T+  L+ A  + G
Sbjct: 239 EM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMG 295

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + DA+ L ++M+ + + PDV T+  L+   C  G +  AL+L +E+ RRG  P I TY 
Sbjct: 296 RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 355

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            ++ G+C    +++AEE+ A  ++ G   + + + IL     R   +D+A
Sbjct: 356 CVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQA 405



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 203/416 (48%), Gaps = 7/416 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  VI  LC  G++  AL + R+M      PD LT+  LV+ L K   L  A  V++EM 
Sbjct: 8   HNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMV 66

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
             R  P+  T    +   C  + +D A  L   M + G+  N +T++ LV  LCK   L 
Sbjct: 67  SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 126

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +AV  + E +A+     T  V+T   ++  + +     +A      M  +    DI+ Y 
Sbjct: 127 EAVALV-ETMAERGCAPT--VVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYT 183

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI GFC + D+        ++ +RGF PD++TY+T+++ LCK G+L +A   +  +S  
Sbjct: 184 ALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS-- 241

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
             AP  I+Y ++I G C  GD+ +A   L  M++    P+   +  ++  + + G L +A
Sbjct: 242 -CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDA 300

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           + +   M++  +S +V TF +L+      G + DA  L +E+   G  P ++TYN ++  
Sbjct: 301 YELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDG 360

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            C    +  A +L  +   RG  P+ +TY  L+ G C  G   +A +   ++ + G
Sbjct: 361 YCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 416



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 184/379 (48%), Gaps = 7/379 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           +P    +N  I G CR   L  AL ++  M N+   P+ +T+  LVH L K   L DAV+
Sbjct: 2   NPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQ 60

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L E+++    +   D  T T+++ S         A  L  +M  + +  + + Y+ L++
Sbjct: 61  VLQEMVS---ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVD 117

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C    +  A A    M +RG  P V+TYN+++   C+  ++DEA  F   +   G  P
Sbjct: 118 GLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHP 177

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D I+Y  +I G C   D+ +  E L  +  +   P+   ++ +IDG  + G L +A    
Sbjct: 178 DIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV--- 234

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           D+      +    T+N+LI    R G + +A  L  +M+ D   PDV TY  L+ A C +
Sbjct: 235 DIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKM 294

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G +  A +L+ +M+   ++PD++T+T L+ G C  G M++A E+  +I   G       +
Sbjct: 295 GRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTY 354

Query: 545 RILKKRYRRMKESDKARDI 563
             +   Y +  +  KA ++
Sbjct: 355 NCVVDGYCKANQVRKAEEL 373



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 155/337 (45%), Gaps = 43/337 (12%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I   C    +G  L L  ++ ++G  PD++T++ +++ LCK G L  A  +  EMS
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS 241

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               +P   TYN+ I GYCR  ++D+A+ L   M ++   P+ VT+  L+ A CK G L 
Sbjct: 242 ---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLD 298

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA +   +++A+   K + DV+T T L+D     G    AL L  ++ ++     I  YN
Sbjct: 299 DAYELFQQMVAN---KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 355

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL----------------------- 337
            +++G+C    +  A         RGF+P+ +TYN L                       
Sbjct: 356 CVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSE 415

Query: 338 --------------LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
                         L+ LC+ G+ D+A  FY  + + G  P   ++ T++  LC      
Sbjct: 416 GGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQ 475

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           +A E L  M++    P P   + ++  Y R G +  A
Sbjct: 476 QAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 512



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 133/302 (44%), Gaps = 33/302 (10%)

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           +NV+I G C  G +  A   + QM      PD +TY  L++ L K  +L +A      + 
Sbjct: 8   HNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMV 66

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
                PD  +   ++Q LC+   +  ARE +  ML + +      ++ ++DG  +C  L 
Sbjct: 67  SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 126

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A ++ + M   G +  V T+N++I    R   + +A    ++M+ +G  PD+ TY  LI
Sbjct: 127 EAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALI 186

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYT---------------------------- 510
           G  C    +   L+L  E+ RRG TPDI+TY+                            
Sbjct: 187 GGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTA 246

Query: 511 ----ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
                LI G+C  G+M EA  +  K+     A D + +  L   + +M   D A ++ Q+
Sbjct: 247 ITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQ 306

Query: 567 WL 568
            +
Sbjct: 307 MV 308



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 7/269 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G +  A+ L  KM+     PDV+T+  L++  CK+G L+ A  + ++M   
Sbjct: 251 SLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVAN 310

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           + SP+  T+ + + G C    ++ AL L   +   G  P   T+N +V   CK     + 
Sbjct: 311 KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCK----ANQ 366

Query: 243 VKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKN--IQTDIVAY 299
           V+   E++AD   +    + +T  IL+    + G   QAL   + +  +     T +  Y
Sbjct: 367 VRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMY 426

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
            ++++  C +G    A  ++ +M++RG++P   T+ T++  LCK  +  +A      + K
Sbjct: 427 AIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 486

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREF 388
            G  P   +   ++   C  G I KA E 
Sbjct: 487 YGHTPGPGTCDAVVSAYCRAGMIQKADEL 515



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 1/93 (1%)

Query: 123 AVIRD-LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           A+I D LC  G+   A+    +MIQ+G VP   T   +V  LCK    ++A  ++ EM +
Sbjct: 427 AIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 486

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
              +P   T +A ++ YCR   + KA  L S +
Sbjct: 487 YGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/343 (35%), Positives = 195/343 (56%), Gaps = 8/343 (2%)

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS-DVITSTILM 268
           ++  M    I  N VT +++++ LCK G    A    G+V+ D      S  VIT   ++
Sbjct: 216 VYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA----GDVVEDMKAWGFSPSVITYNTII 271

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           D Y K G  F+A AL  +M  K I  + + +N+LI+GFC + ++++A   F +M ++G  
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+V+TYN+L+N LC  GKLDEA      +S  G+ P+ ++Y  +I G C    + +ARE 
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  + ++ + P    +N +ID YG+ G + +AF +R +ML  GV  NV T+N LI+   R
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML---RRGITPD 505
            G++ +A  L KEM  +G+  D+ TYN+L+ A C  G    A++L DEM    ++G   +
Sbjct: 452 EGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRAN 511

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
           I+TY  LIKG C +G ++EA  +  ++   GL  +   + IL+
Sbjct: 512 IVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILR 554



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 188/378 (49%), Gaps = 22/378 (5%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+IG    + ++MI++    +V+T + ++N LCK+G  +KA  V+ +M     SP+  TY
Sbjct: 208 GRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITY 267

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYC+  ++ KA  L   M    I PN +T NIL+   C+   +  A K   E+  
Sbjct: 268 NTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR 327

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   +V+T   L++    NG   +AL L + M    ++ ++V YN LINGFC    
Sbjct: 328 QG---LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKM 384

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A      + KRG  P+VIT+NTL++   K G++D+A     ++  TGV P+  +Y  
Sbjct: 385 LKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNC 444

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD---LML 428
           +I G C  G++ +AR+    M    +  +   +N+++D   + G+   A  + D   LM 
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLME 504

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G  +N+ T+N LI      G + +A  L  EML  G+ P+  TY++            
Sbjct: 505 KKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI------------ 552

Query: 489 LALQLYDEMLRRGITPDI 506
               L DEM+ +G  PDI
Sbjct: 553 ----LRDEMMEKGFIPDI 566



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 151/292 (51%), Gaps = 10/292 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  GK+  A  L ++M+ K   P+ +T N L++  C+  ++  A  V  EM   
Sbjct: 269 TIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQ 328

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN+ I G C   +LD+AL L   M+  G++PN VT+N L++  CKK +L +A
Sbjct: 329 GLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEA 388

Query: 243 VKFLGEVLADDDGKA--TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            + L     DD GK     +VIT   L+D+Y K G    A  L + M    +  ++  YN
Sbjct: 389 REML-----DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYN 443

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF---YGVL 357
            LI GFC  G++  A     +M   G   D++TYN L++ LCK+G+  +A        ++
Sbjct: 444 CLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLM 503

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
            K G   + ++Y  +I+G C  G + +A   L  MLEK ++P    ++++ D
Sbjct: 504 EKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD 555



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 137/250 (54%), Gaps = 7/250 (2%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L+ +   + ++I  LC  GK+  AL L+ KM   G  P+V+T+N L+N  CK   L+
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  ++ ++ +   +PN  T+N  I  Y +   +D A  L S M + G+ PN  T+N L+
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF-- 288
              C++G + +A K   E+   +     +D++T  IL+D+  K G+  +A+ L ++M   
Sbjct: 447 VGFCREGNVKEARKLAKEM---EGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLM 503

Query: 289 -QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            +K  + +IV YNVLI GFC  G +  A     +ML++G +P+  TY+ L + + ++G +
Sbjct: 504 EKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 563

Query: 348 -DEASHFYGV 356
            D   H Y V
Sbjct: 564 PDIDGHLYNV 573


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 221/431 (51%), Gaps = 3/431 (0%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           TA+ L ++M  KG   + +T N L+N  C +G +  +  V+ ++ ++   P+  T N  +
Sbjct: 28  TAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLM 87

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   E+ K+LH    +   G + + V++  L++ LCK G    AVK L  +   +D 
Sbjct: 88  KGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMI---EDR 144

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               +V+    ++D   K+    +A  L+++M  + I  D + Y  LI GFCL G +  A
Sbjct: 145 STRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGA 204

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           F+   +M+ +   P V  YN L+N LCK+G + EA +   V++K G+ P  ++Y T++ G
Sbjct: 205 FSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDG 264

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C+ G++  A++   +M++  V P  + +N++I+G  +C  +  A ++   ML   +  +
Sbjct: 265 YCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPD 324

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             T+N+LI    + G I  A +L  EM   G   DV TY  L+ A C   ++  A  L+ 
Sbjct: 325 TVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFM 384

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
           +M  RGI P + TYT LI G C  G +K A+E+F  +   G  ID   + ++     +  
Sbjct: 385 KMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEG 444

Query: 556 ESDKARDIHQK 566
             D+A  I  K
Sbjct: 445 MFDEALAIKSK 455



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 223/447 (49%), Gaps = 3/447 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G++  +  +  K+++ G  PD +T N L+  LC  G+++K+ H   ++    
Sbjct: 51  LINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQG 110

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  +Y   + G C++ E   A+ L   + +   RPN V +N ++  LCK  L+ +A 
Sbjct: 111 FQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAY 170

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+   D      D IT T L+  +   G    A +L ++M  KNI   +  YN+LI
Sbjct: 171 DLYSEM---DARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILI 227

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           N  C  G++  A      M K G  P V+TY+TL++  C  G++  A   +  + + GV 
Sbjct: 228 NALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVN 287

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+  SY  +I GLC    + +A   L  ML K++VP+   +N +IDG  + G +++A ++
Sbjct: 288 PNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNL 347

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   G  ++V T+ +L+ A  +  ++  A +L  +M   GI P ++TY  LI   C 
Sbjct: 348 MNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCK 407

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A +L+  +L +G   D+ TYT +I G C  G   EA  + +K++  G   + + 
Sbjct: 408 GGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVT 467

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           F I+ +      E+DKA  +  + + +
Sbjct: 468 FEIIIRSLFEKDENDKAEKLLHEMIAK 494



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 227/448 (50%), Gaps = 7/448 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +++ LCL G++  +L    K++ +G   D +++  L+N LCKIG+   A  ++R + + 
Sbjct: 85  TLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDR 144

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   YN  I G C+   +++A  L+S M   GI P+ +T+  L++  C  G L  A
Sbjct: 145 STRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGA 204

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E++  +       V    IL+++  K G+  +A  L   M ++ I+  +V Y+ L
Sbjct: 205 FSLLDEMILKN---INPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTL 261

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+CL G++ +A   F  M++ G  P+V +YN ++N LCK  ++DEA +    +    +
Sbjct: 262 MDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNM 321

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y ++I GLC  G I  A   +  M  +    +   +  ++D   +  +L  A +
Sbjct: 322 VPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATA 381

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M   G+   ++T+ ALI    +GG + +A  L + +L+ G   DV+TY ++I   C
Sbjct: 382 LFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLC 441

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G    AL +  +M   G  P+ +T+  +I+    +    +AE++  ++   GL +  +
Sbjct: 442 KEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLV--L 499

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLR 570
            F++     +   E+DKA  +  + + +
Sbjct: 500 DFKVADVFVQN--ENDKAEKLLHEMIAK 525



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 194/424 (45%), Gaps = 38/424 (8%)

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
           +R +P    +N  +    ++ +   A+ L   M   GIR N VT NIL++  C  G +  
Sbjct: 4   VRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAF 63

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           +   LG++L         D IT   LM      G+  ++L   + +  +  Q D V+Y  
Sbjct: 64  SFSVLGKILKLG---YQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGT 120

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L+NG C  G+   A      +  R   P+V+ YNT+++ LCK   ++EA   Y  +   G
Sbjct: 121 LLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII------------- 408
           + PD I+Y T+I G C+ G ++ A   L  M+ K++ P  +I+N++I             
Sbjct: 181 IFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAK 240

Query: 409 ----------------------DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
                                 DGY   G++ NA  I   M+  GV+ NV+++N +I   
Sbjct: 241 NLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGL 300

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            +   + +A +L +EML   + PD  TYN LI   C  G I  AL L +EM  RG   D+
Sbjct: 301 CKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADV 360

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +TYT L+   C   N+ +A  +F K++  G+      +  L     +      A+++ Q 
Sbjct: 361 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQH 420

Query: 567 WLLR 570
            L++
Sbjct: 421 LLVK 424



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 196/388 (50%), Gaps = 3/388 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D+  +  ++  LC  G+   A+ L R +  + T P+V+ +N +++ LCK   + +A  
Sbjct: 112 QMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYD 171

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  EM      P+  TY   I G+C + +L  A  L   M    I P    +NIL++ALC
Sbjct: 172 LYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALC 231

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G + +A   L  V+  +  K    V+T + LMD Y   G+   A  +++ M Q  +  
Sbjct: 232 KEGNVKEAKNLLA-VMTKEGIK--PGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNP 288

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++ +YN++ING C    +  A     +ML +  +PD +TYN+L++ LCK G++  A +  
Sbjct: 289 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 348

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G   D ++Y +++  LC + ++ KA    + M E+ + P  + +  +IDG  + 
Sbjct: 349 NEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKG 408

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G L NA  +   +L  G   +V+T+  +I    + G   +A ++K +M  +G  P+  T+
Sbjct: 409 GRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 468

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGI 502
            ++I +         A +L  EM+ +G+
Sbjct: 469 EIIIRSLFEKDENDKAEKLLHEMIAKGL 496



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 169/316 (53%)

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           + T  +I    ++ S  K      A++L   M  K I+ + V  N+LIN FC  G ++ +
Sbjct: 5   RHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFS 64

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           F+   ++LK G+ PD IT NTL+  LC +G++ ++ HF+  +   G   D +SY T++ G
Sbjct: 65  FSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNG 124

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           LC  G+   A + L  + ++S  P   ++N IIDG  +   ++ A+ +   M + G+  +
Sbjct: 125 LCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPD 184

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             T+  LI      G +  AFSL  EM+L  I P V+ YN+LI A C  G++  A  L  
Sbjct: 185 AITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLA 244

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
            M + GI P ++TY+ L+ G+C  G ++ A+++F  +  +G+  +   + I+     + K
Sbjct: 245 VMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCK 304

Query: 556 ESDKARDIHQKWLLRN 571
             D+A ++ ++ L +N
Sbjct: 305 RVDEAMNLLREMLHKN 320



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 43/105 (40%)

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           MLL    P +  +N ++G+   +     A+ L  +M  +GI  + +T   LI   C  G 
Sbjct: 1   MLLVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQ 60

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           M  +  V  KI  LG   D I    L K      E  K+   H K
Sbjct: 61  MAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDK 105


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 213/435 (48%), Gaps = 17/435 (3%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G   +V T+N L+ +L +    +KA  V +EM +    P+  T+   + G CR N+L+KA
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M   G  P+   +N L+    K    G A KFL E++ +        V+T T +
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKN---HCLPTVVTYTNI 118

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D   K      A+ L ++M  K    +I  YNV++ G C    +  A     +M  RG+
Sbjct: 119 VDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGY 178

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PDV+TYN+ +  LCK  ++DEA  F   L++  V PD +SY T+I GLC  GD+  A  
Sbjct: 179 FPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSASR 235

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L  M  +   P+   ++ +IDG+ + G++  A  + D ML  G   N+  +N+L+ A  
Sbjct: 236 MLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALH 295

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP--- 504
           R G I  A  +  EM   G  PDV +YN  I   C    +  A  ++D M+ RG TP   
Sbjct: 296 RLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNAS 355

Query: 505 -------DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF-RILKKRYRRMKE 556
                  DI+ YT L+ G C  G   EA  +F+K+    +    + F  ++   + + ++
Sbjct: 356 SYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQ 415

Query: 557 SDKARDIHQKWLLRN 571
            DKA  IH++ L +N
Sbjct: 416 IDKALQIHKQMLEKN 430



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 221/452 (48%), Gaps = 18/452 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++  LC   +   A+ L  +M  KG  P++ T+N +V  LC+   L++A  ++ EM+
Sbjct: 115 YTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMA 174

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  TYN+FI G C+ + +D+A    + M    + P+ V++  +++ LCK G L 
Sbjct: 175 VRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLD 231

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A + L  +    +   T DV+T + L+D + K G+  +A+ L + M +   + ++VAYN
Sbjct: 232 SASRMLDHM---SNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYN 288

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L+      G I  A     +M +RGF PDV++YN  ++ LCK  ++ +A   +  + + 
Sbjct: 289 SLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER 348

Query: 361 GVAPDQISYKTII----------QGLCIHGDIVKAREFLLSML-EKSVVPEPHIWNVIID 409
           G  P+  SY  +I           GLC  G   +A      +L EK   P+   +NV++D
Sbjct: 349 GCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLD 408

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
            + +   +  A  I   ML      NV T+N L+        + DA ++   M+ +G  P
Sbjct: 409 SHCKRRQIDKALQIHKQMLEKN-CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIP 467

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D  TY  L+ A C  G    AL+L++E ++ G  PD++TY+ LI G       +EA  +F
Sbjct: 468 DFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLF 527

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
            K+       D     +L ++ + + +  KA 
Sbjct: 528 TKLVERRWVPDDKTLGLLHRKLKLLNKPRKAE 559



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 189/425 (44%), Gaps = 54/425 (12%)

Query: 92  LILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           L  +  LD  K M +   VR     D   + + I+ LC   ++  A   R+ + +    P
Sbjct: 157 LCEERKLDEAKKMLEEMAVRGYF-PDVVTYNSFIKGLCKCDRVDEA---RKFLARMPVTP 212

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           DV+++  ++N LCK GDL+ A  ++  MS    +P+  TY++ I G+C+  E+++A+ L 
Sbjct: 213 DVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 272

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
            +M   G RPN V +N L+ AL + G +G A   L E                       
Sbjct: 273 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE----------------------- 309

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP-- 329
                          M ++    D+V+YN  I+G C    +  A A F +M++RG  P  
Sbjct: 310 ---------------MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 354

Query: 330 --------DVITYNTLLNCLCKQGKLDEA-SHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
                   D++ Y  LL+ LCK G+ DEA + F  VL +    PD   Y  ++   C   
Sbjct: 355 SSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 414

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            I KA +    MLEK+       WN+++ G      LS+A ++   M+  G   +  T+ 
Sbjct: 415 QIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYG 473

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            L+ A  + G    A  L +E +  G  PDV TY+ LI    +      A  L+ +++ R
Sbjct: 474 TLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVER 533

Query: 501 GITPD 505
              PD
Sbjct: 534 RWVPD 538


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 228/443 (51%), Gaps = 5/443 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKG--TVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           ++  LC   +   AL L   M   G    PDV++++ ++N   K GDL+K      EM +
Sbjct: 57  LLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLD 116

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
            R SPN  TYN+ I   C+   +DKA+ + +TM  +G+ P+ +T+N +VH  C  G   +
Sbjct: 117 QRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKE 176

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+ FL ++ +D       DV+T   LMD   KNG   +A  +++ M ++ ++ +I  Y  
Sbjct: 177 AIVFLKKMRSDG---VEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGT 233

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L+ G+   G +         M++ G  P+   ++ L+    KQ K++EA   +  + + G
Sbjct: 234 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 293

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + P+ ++Y  +I  LC  G +  A  +   M+++ + P   ++N +I G   C     A 
Sbjct: 294 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 353

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   ML  G+  N   FN++I +  + G + ++  L   M+  G+ PD+ TY+ LI   
Sbjct: 354 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 413

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C  G +  A +L   M+  G+ PD +TY+ LI G+C    MK+A  +F ++++ G++ D 
Sbjct: 414 CLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDI 473

Query: 542 IPFRILKKRYRRMKESDKARDIH 564
           I + I+ +   + + +  A++++
Sbjct: 474 ITYNIILQGLFQTRRTAAAKELY 496



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 189/362 (52%), Gaps = 5/362 (1%)

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           + A H+F  +   GI P+  ++NIL++ LC +    +A++ L  ++ADD G    DV++ 
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELL-HIMADDGGDCPPDVVSY 91

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           + +++ +FK GD  +  + +N+M  + I  ++V YN +I   C    +  A      M+K
Sbjct: 92  STVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 151

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G +PD +TYN++++  C  G+  EA  F   +   GV PD ++Y +++  LC +G   +
Sbjct: 152 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 211

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           AR+   SM ++ + PE   +  ++ GY   G L     + DLM+  G+  N + F+ L+ 
Sbjct: 212 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 271

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A  +   + +A  +  +M   G+ P+  TY  +IG  C  G +  A+  +++M+  G++P
Sbjct: 272 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 331

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKAR 561
             I Y  LI G C     + AEE+  ++   G+ ++ I F  +   +    R+ ES+K  
Sbjct: 332 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 391

Query: 562 DI 563
           D+
Sbjct: 392 DL 393



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 205/428 (47%), Gaps = 44/428 (10%)

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG--IRPNRVTHN 227
           E A HV  E+   R  P+  +YN  + G C  N   +AL L   MA++G    P+ V+++
Sbjct: 34  EDARHVFDELLR-RGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            +++   K+G L        E+L   D + + +V+T   ++ +  K     +A+ +   M
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEML---DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 149

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            +  +  D + YN +++GFC +G    A  +  +M   G  PDV+TYN+L++ LCK G+ 
Sbjct: 150 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC 209

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            EA   +  ++K G+ P+  +Y T++QG    G +V+    L  M+   + P  ++++++
Sbjct: 210 TEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 269

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           +  Y +   +  A  +   M   G++ N  T+ A+I    + G + DA    ++M+ +G+
Sbjct: 270 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 329

Query: 468 FPDVFTYNLL-----------------------------------IGASCNLGHIHLALQ 492
            P    YN L                                   I + C  G +  + +
Sbjct: 330 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 389

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY- 551
           L+D M+R G+ PDIITY+ LI G+C  G M EA ++ A + ++G+  D + +  L   Y 
Sbjct: 390 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYC 449

Query: 552 --RRMKES 557
              RMK++
Sbjct: 450 KISRMKDA 457



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/469 (23%), Positives = 210/469 (44%), Gaps = 38/469 (8%)

Query: 107 TGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI 166
           T  V+  +  D   + +++   C  G+   A+   +KM   G  PDV+T+N L++ LCK 
Sbjct: 147 TTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKN 206

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           G   +A  +   M++    P   TY   + GY     L +   L   M  NGI PN    
Sbjct: 207 GRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 266

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           +ILV A  K+  + +A+    ++          + +T   ++    K+G    A+  +  
Sbjct: 267 SILVCAYAKQEKVEEAMLVFSKMRQQG---LNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 323

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M  + +    + YN LI+G C       A     +ML RG   + I +N++++  CK+G+
Sbjct: 324 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 383

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           + E+   + ++ + GV PD I+Y T+I G C+ G + +A + L SM+   + P+   ++ 
Sbjct: 384 VIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYST 443

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--LAETRGGSIF----------- 453
           +I+GY +   + +A  +   M S GVS ++ T+N ++  L +TR  +             
Sbjct: 444 LINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSG 503

Query: 454 ----------------------DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
                                 DA  + + + L  +  +  T+N++I A   +G    A 
Sbjct: 504 RQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 563

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            L+      G+ P+  TY  + +    +G ++E +++F  ++  G  +D
Sbjct: 564 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 612



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/333 (22%), Positives = 149/333 (44%), Gaps = 38/333 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE- 181
           AVI  LC  G++  A+    +MI +G  P  + +N L++ LC     E+A+ +I EM + 
Sbjct: 303 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 362

Query: 182 ----------------------------------MRPSPNCATYNAFITGYCRVNELDKA 207
                                             +   P+  TY+  I GYC   ++D+A
Sbjct: 363 GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 422

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L ++M + G++P+ VT++ L++  CK   + DA+    E+   +    + D+IT  I+
Sbjct: 423 TKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREM---ESSGVSPDIITYNII 479

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +   F+      A  L+  + +   Q ++  YN++++G C N     A   F  +     
Sbjct: 480 LQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDL 539

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             +  T+N +++ L K G+ DEA   +   S  G+ P+  +Y+ + + +   G + +  +
Sbjct: 540 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 599

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
             LSM +     +  + N I+    + G+++ A
Sbjct: 600 LFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 632



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 135/287 (47%), Gaps = 3/287 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G++  +  L   M++ G  PD++T++ L++  C  G +++A  ++  M  +
Sbjct: 373 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 432

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+C TY+  I GYC+++ +  AL LF  M ++G+ P+ +T+NI++  L +      A
Sbjct: 433 GMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 492

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +    V     G+   ++ T  I++    KN     AL ++ ++   +++ +   +N++
Sbjct: 493 KELY--VGITKSGRQL-ELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIM 549

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+     G    A   F      G +P+  TY  +   +  QG L+E    +  +   G 
Sbjct: 550 IDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 609

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
             D      I++ L   G+I +A  +L  + EK    E    ++ ID
Sbjct: 610 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 656


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 232/483 (48%), Gaps = 40/483 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKG--TVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           +++ LC   +   AL L + M   G    PDV+++  ++N   K GDL+KA     EM +
Sbjct: 168 LLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLD 227

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               PN  TY++ I   C+   +DKA+ + ++M  NG+ PN  T+N +VH  C  G   +
Sbjct: 228 RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+ FL ++ +D       DV+T   LMD   KNG   +A  +++ M ++ ++ +I  Y  
Sbjct: 288 AIGFLKKMHSDG---VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 302 LINGFCL-----------------------------------NGDISSAFAYFCQMLKRG 326
           L+ G+                                      G +  A   F +M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PD +TY T++  LCK G++++A  ++  +    ++P  I Y ++I  LCI     KA+
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E +L ML++ +  +   +N IID + + G +  +  + DLM+  GV  ++ T++ LI   
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + +A  L   M+  G+ PD  TYN LI   C +  +  AL L+ EM   G++PDI
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDI 584

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           ITY  +++G         A+E++  I   G  ++   + I+     +   +D+A  + Q 
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644

Query: 567 WLL 569
             L
Sbjct: 645 LCL 647



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 202/418 (48%), Gaps = 5/418 (1%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P++ T+  L+   C  G L+     +  + +     +   +   + G C       A+ 
Sbjct: 88  TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147

Query: 210 L-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           +    M   G  PN  ++NIL+  LC +    +A++ L +++ DD G    DV++ T ++
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL-QMMPDDGGDCPPDVVSYTTVI 206

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           + +FK GD  +A   +++M  + I  ++V Y+ +I   C    +  A      M+K G +
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+  TYN++++  C  G+  EA  F   +   GV PD ++Y +++  LC +G   +AR+ 
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
             SM ++ + PE   +  ++ GY   G L     + DLM+  G+  N + F+ LI A  +
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +  A  +  +M   G+ PD  TY  +IG  C  G +  A++ +++M+   ++P  I 
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARDI 563
           Y  LI   C      +A+E+  ++   G+ +D I F  +   +    R+ ES+K  D+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/528 (24%), Positives = 226/528 (42%), Gaps = 105/528 (19%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L+ L+ M D G        D   +  VI      G +  A     +M+ +G +P+V+
Sbjct: 179 QEALELLQMMPDDGG---DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVV 235

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++ ++  LCK   ++KA  V+  M +    PNC TYN+ + GYC   +  +A+     M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD------------DGKATSDVI 262
            ++G+ P+ VT+N L+  LCK G   +A K    +                 G AT   +
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 263 TS--------------------TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                 +IL+ +Y K G   QA+ +++ M Q+ +  D V Y  +
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 303 INGFCLNGDISSAFAYFCQM-----------------------------------LKRGF 327
           I   C +G +  A  YF QM                                   L RG 
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             D I +N++++  CK+G++ E+   + ++ + GV PD I+Y T+I G C+ G + +A +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--LA 445
            L SM+   + P+   +N +I+GY +   + +A  +   M S GVS ++ T+N ++  L 
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595

Query: 446 ETR--------------GGSIFD-------------------AFSLKKEMLLDGIFPDVF 472
           +TR               G+  +                   A  + + + L  +  +  
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           T+N++IGA   +G    A  L+  +   G+ PD+ TY+ + +    +G
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/486 (23%), Positives = 206/486 (42%), Gaps = 67/486 (13%)

Query: 107 TGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI 166
           T  V+  +  + R + +++   C  G+   A+   +KM   G  PDV+T+N L++ LCK 
Sbjct: 258 TSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKN 317

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYC--------------------------- 199
           G   +A  +   M++    P   TY   + GY                            
Sbjct: 318 GRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 200 --------RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
                   +  ++D+A+ +FS M   G+ P+ VT+  ++  LCK G + DA+++  +++ 
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437

Query: 252 DD--------------------------------DGKATSDVITSTILMDSYFKNGDKFQ 279
           +                                 D     D I    ++DS+ K G   +
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           +  L++ M +  ++ DI+ Y+ LI+G+CL G +  A      M+  G  PD +TYNTL+N
Sbjct: 498 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             CK  ++++A   +  +  +GV+PD I+Y  I+QGL        A+E  + + E     
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           E   +N+I+ G  +      A  +   +    +     TFN +I A  + G   +A  L 
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
             +  +G+ PDV TY+L+       G +     L+  M   G T +      +++    R
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737

Query: 520 GNMKEA 525
           G++  A
Sbjct: 738 GDITRA 743



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 41/328 (12%)

Query: 280 ALALWNDMFQK---NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF--------- 327
           A++ +N M +     +  ++  Y +LI   C  G +   FA    ++K+GF         
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 328 ---------------------------LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
                                      +P+V +YN LL  LC + +  EA     ++   
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 361 G--VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           G    PD +SY T+I G    GD+ KA      ML++ ++P    ++ II    +   + 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   M+  GV  N  T+N+++      G   +A    K+M  DG+ PDV TYN L+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G    A +++D M +RG+ P+I TY  L++G+  +G + E   +   +   G+ 
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQK 566
            +H  F IL   Y +  + D+A  +  K
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSK 399



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 141/287 (49%), Gaps = 3/287 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G++  +  L   M++ G  PD++T++ L++  C  G +++A  ++  M  +
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+C TYN  I GYC+++ ++ AL LF  M ++G+ P+ +T+NI++  L +      A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +     +   +     ++ T  I++    KN    +AL ++ ++   ++Q +   +N++
Sbjct: 604 KELY---VGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I      G    A   F  +   G +PDV TY+ +   L +QG L+E    +  + + G 
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
             +     +I++ L   GDI +A  +L  + EK    E    ++ +D
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 5/151 (3%)

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML---LDGIFPDVFTYN 475
           +A  + D +L  G  ++++  N   LA+    S   A S    M     D + P++ TY 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNC-ALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE-VFAKIQT 534
           +LIG+ C  G + L       ++++G   D I +T L+KG CA     +A + V  ++  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           LG   +   + IL K       S +A ++ Q
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQ 186


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 215/431 (49%), Gaps = 3/431 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++  L+        +I  LC  GK   A+ L   M+ +G  PDV T+  ++N LCKIG+ 
Sbjct: 160 IKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGET 219

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A  ++++M E    PN  TY+  I  + +   +++AL +FS M   GI P+  T+N L
Sbjct: 220 AAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSL 279

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LC      +A   L E+ + +      D++T  +L+D+  K G   +A  +   M +
Sbjct: 280 IQGLCNFSQWKEASALLNEMRSLN---IMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTE 336

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             ++ D+V Y+ L+ G+ L  ++  A   F  M+ +G  PDV +YN L+N  CK  ++DE
Sbjct: 337 MGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDE 396

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   +  +   G+ P+ +SY T+I GLC  G + +AR    +M     +P    +++++D
Sbjct: 397 AKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLD 456

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G+ + G    AF +   M S     N+  +N LI A  + G++ DA  L  E+ + G+ P
Sbjct: 457 GFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQP 516

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +   Y  +I   C  G +  AL+ +  M   G  PD I+Y  +I+G     +   A ++ 
Sbjct: 517 NAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLI 576

Query: 530 AKIQTLGLAID 540
            +++  G   D
Sbjct: 577 GEMRDKGFIAD 587



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 217/408 (53%), Gaps = 3/408 (0%)

Query: 130 LGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCA 189
           +G    T + L ++M   G  P++ T + L+N    +  ++ A  V+ ++ ++   P   
Sbjct: 110 MGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIV 169

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           T+   I   C+V +  +A+ LF  M   G RP+  T+  +++ LCK G    A   L ++
Sbjct: 170 TFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKM 229

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
              ++     +V+T + ++DS+ K+    +AL +++ M  K I  DI  YN LI G C  
Sbjct: 230 ---EEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNF 286

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
                A A   +M     +PD++T+N L++ +CK+GK+ EA      +++ GV PD ++Y
Sbjct: 287 SQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTY 346

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            +++ G  +  ++V+AR+   +M+ K   P+   +N++I+GY +   +  A  + + M+ 
Sbjct: 347 SSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIH 406

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G++ N  ++N LI    + GS+ +A +L K M  +G  P++FTY++L+   C  G+   
Sbjct: 407 QGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGK 466

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           A +L+  M      P+++ Y  LI   C  GN+++A ++F+++   GL
Sbjct: 467 AFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGL 514



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 204/423 (48%), Gaps = 47/423 (11%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D R+H     D C    I  AL     M+ +  +P ++    L++ + K+G  +  D VI
Sbjct: 65  DKRKH----DDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMG--QYYDTVI 118

Query: 177 ---REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
              ++M     SPN  T +  I  +  +  +D A  + + +   G++P  VT   L++ L
Sbjct: 119 SLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWL 178

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G      KF                                 QA+ L++DM  +  +
Sbjct: 179 CKVG------KFA--------------------------------QAMELFDDMVARGCR 200

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+  Y  +ING C  G+ ++A     +M + G  P+V+TY+T+++   K  +++EA   
Sbjct: 201 PDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDI 260

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  +   G++PD  +Y ++IQGLC      +A   L  M   +++P+   +NV++D   +
Sbjct: 261 FSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICK 320

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G +S A  +   M   GV  +V T+++L+   +    + +A  L   M+  G  PDVF+
Sbjct: 321 EGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFS 380

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN+LI   C +  I  A QL++EM+ +G+TP+ ++Y  LI G C  G+++EA  +F  + 
Sbjct: 381 YNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMH 440

Query: 534 TLG 536
           T G
Sbjct: 441 TNG 443



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 169/348 (48%), Gaps = 8/348 (2%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D  + E LD    M+  G     +  D   + ++I+ LC   +   A  L  +M     +
Sbjct: 251 DRRVNEALDIFSYMKVKG-----ISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIM 305

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD++T N LV+ +CK G + +A  V++ M+EM   P+  TY++ + GY   +E+ +A  L
Sbjct: 306 PDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKL 365

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M   G +P+  ++NIL++  CK   + +A +   E++       T + ++   L+  
Sbjct: 366 FDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG---LTPNNVSYNTLIHG 422

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             + G   +A  L+ +M       ++  Y++L++GFC  G    AF  F  M      P+
Sbjct: 423 LCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPN 482

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           ++ YN L++ +CK G L +A   +  L   G+ P+   Y TII GLC  G + +A E   
Sbjct: 483 LVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFR 542

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
           +M E    P+   +NVII G+    D S A  +   M   G  ++V T
Sbjct: 543 NMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 151/309 (48%), Gaps = 1/309 (0%)

Query: 261 VITSTILMDSYFKNGDKFQA-LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +I  T L+ +  K G  +   ++L   M    +  +I   ++LIN F     +  AF+  
Sbjct: 97  IIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVL 156

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +++K G  P ++T+ TL+N LCK GK  +A   +  +   G  PD  +Y TII GLC  
Sbjct: 157 AKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKI 216

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G+   A   L  M E    P    ++ IID + +   ++ A  I   M   G+S ++FT+
Sbjct: 217 GETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTY 276

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N+LI          +A +L  EM    I PD+ T+N+L+   C  G +  A  +   M  
Sbjct: 277 NSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTE 336

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G+ PD++TY+ L+ G+  R  + EA ++F  + T G   D   + IL   Y ++K  D+
Sbjct: 337 MGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDE 396

Query: 560 ARDIHQKWL 568
           A+ +  + +
Sbjct: 397 AKQLFNEMI 405



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 135/293 (46%), Gaps = 3/293 (1%)

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI-SSAFAYFCQMLKRGFLPD 330
           F+N D   ALA +N M  +     I+ +  L++     G    +  +   QM   G  P+
Sbjct: 75  FRNID--DALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           + T + L+NC     ++D A      + K G+ P  +++ T+I  LC  G   +A E   
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M+ +   P+ + +  II+G  + G+ + A  +   M   G   NV T++ +I +  +  
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A  +   M + GI PD+FTYN LI   CN      A  L +EM    I PDI+T+ 
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            L+   C  G + EA+ V   +  +G+  D + +  L   Y    E  +AR +
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKL 365


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 233/485 (48%), Gaps = 40/485 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKG--TVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           +++ LC   +   AL L + M   G    PDV+++  ++N   K GDL+KA     EM +
Sbjct: 168 LLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLD 227

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               PN  TY++ I   C+   +DKA+ + ++M  NG+ PN  T+N +VH  C  G   +
Sbjct: 228 RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+ FL ++ +D       DV+T   LMD   KNG   +A  +++ M ++ ++ +I  Y  
Sbjct: 288 AIGFLKKMHSDG---VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 302 LINGFCL-----------------------------------NGDISSAFAYFCQMLKRG 326
           L+ G+                                      G +  A   F +M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PD +TY T++  LCK G++++A  ++  +    ++P  I Y ++I  LCI     KA+
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E +L ML++ +  +   +N IID + + G +  +  + DLM+  GV  ++ T++ LI   
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + +A  L   M+  G+ PD  TYN LI   C +  +  AL L+ EM   G++PDI
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDI 584

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           ITY  +++G         A+E++  I   G  ++   + I+     +   +D+A  + Q 
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644

Query: 567 WLLRN 571
             L +
Sbjct: 645 LCLTD 649



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 221/470 (47%), Gaps = 41/470 (8%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHVIREMSEMRPSPN 187
           C  G++         +I+KG + D +    ++  LC       A D V+R M+++   PN
Sbjct: 102 CCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPN 161

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNG--IRPNRVTHNILVHALCKKGLLGDAVKF 245
             +YN  + G C  N   +AL L   M ++G    P+ V++  +++   K+G L  A   
Sbjct: 162 VFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGT 221

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             E+L   D     +V+T + ++ +  K     +A+ +   M +  +  +   YN +++G
Sbjct: 222 YHEML---DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG 278

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           +C +G    A  +  +M   G  PDV+TYN+L++ LCK G+  EA   +  ++K G+ P+
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
             +Y T++QG    G +V+    L  M+   + P  ++++++I  Y + G +  A  +  
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFS 398

Query: 426 LMLSFGVSSNVFTFNALILAETRGGS-------------------------------IFD 454
            M   G++ +  T+  +I    + G                                IFD
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 455 AFSLKKEMLLD----GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +   KE++L+    GI  D   +N +I + C  G +  + +L+D M+R G+ PDIITY+
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 518

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            LI G+C  G M EA ++ A + ++G+  D + +  L   Y ++   + A
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 201/418 (48%), Gaps = 5/418 (1%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P++ T+  L+   C  G L+     +  + +     +   +   + G C       A+ 
Sbjct: 88  TPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMD 147

Query: 210 L-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           +    M   G  PN  ++NIL+  LC      +A++ L +++ DD G    DV++ T ++
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELL-QMMPDDGGDCPPDVVSYTTVI 206

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           + +FK GD  +A   +++M  + I  ++V Y+ +I   C    +  A      M+K G +
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+  TYN++++  C  G+  EA  F   +   GV PD ++Y +++  LC +G   +AR+ 
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
             SM ++ + PE   +  ++ GY   G L     + DLM+  G+  N + F+ LI A  +
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +  A  +  +M   G+ PD  TY  +IG  C  G +  A++ +++M+   ++P  I 
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARDI 563
           Y  LI   C      +A+E+  ++   G+ +D I F  +   +    R+ ES+K  D+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/518 (24%), Positives = 222/518 (42%), Gaps = 105/518 (20%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L+ L+ M D G        D   +  VI      G +  A     +M+ +G +P+V+
Sbjct: 179 QEALELLQMMPDDGG---DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVV 235

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++ ++  LCK   ++KA  V+  M +    PNC TYN+ + GYC   +  +A+     M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD------------DGKATSDVI 262
            ++G+ P+ VT+N L+  LCK G   +A K    +                 G AT   +
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 263 TS--------------------TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                 +IL+ +Y K G   QA+ +++ M Q+ +  D V Y  +
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 303 INGFCLNGDISSAFAYFCQM-----------------------------------LKRGF 327
           I   C +G +  A  YF QM                                   L RG 
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             D I +N++++  CK+G++ E+   + ++ + GV PD I+Y T+I G C+ G + +A +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--LA 445
            L SM+   + P+   +N +I+GY +   + +A  +   M S GVS ++ T+N ++  L 
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595

Query: 446 ETR--------------GGSIFD-------------------AFSLKKEMLLDGIFPDVF 472
           +TR               G+  +                   A  + + + L  +  +  
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           T+N++IGA   +G    A  L+  +   G+ PD+ TY+
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 201/474 (42%), Gaps = 67/474 (14%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R + +++   C  G+   A+   +KM   G  PDV+T+N L++ LCK G   +A  +   
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 179 MSEMRPSPNCATYNAFITGYC-----------------------------------RVNE 203
           M++    P   TY   + GY                                    +  +
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD---------- 253
           +D+A+ +FS M   G+ P+ VT+  ++  LCK G + DA+++  +++ +           
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 254 ----------------------DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
                                 D     D I    ++DS+ K G   ++  L++ M +  
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           ++ DI+ Y+ LI+G+CL G +  A      M+  G  PD +TYNTL+N  CK  ++++A 
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
             +  +  +GV+PD I+Y  I+QGL        A+E  + + E     E   +N+I+ G 
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +      A  +   +    +     TFN +I A  + G   +A  L   +  +G+ PDV
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 689

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            TY+L+       G +     L+  M   G T +      +++    RG++  A
Sbjct: 690 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 147/315 (46%), Gaps = 3/315 (0%)

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           + T ++ T  ILM S    G      A   ++ +K    D +A+  ++ G C +   S A
Sbjct: 86  EVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDA 145

Query: 316 FAYFC-QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG--VAPDQISYKTI 372
                 +M + G +P+V +YN LL  LC   +  EA     ++   G    PD +SY T+
Sbjct: 146 MDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I G    GD+ KA      ML++ ++P    ++ II    +   +  A  +   M+  GV
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             N  T+N+++      G   +A    K+M  DG+ PDV TYN L+   C  G    A +
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           ++D M +RG+ P+I TY  L++G+  +G + E   +   +   G+  +H  F IL   Y 
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 553 RMKESDKARDIHQKW 567
           +  + D+A  +  K 
Sbjct: 386 KQGKVDQAMLVFSKM 400



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 141/287 (49%), Gaps = 3/287 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G++  +  L   M++ G  PD++T++ L++  C  G +++A  ++  M  +
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+C TYN  I GYC+++ ++ AL LF  M ++G+ P+ +T+NI++  L +      A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +     +   +     ++ T  I++    KN    +AL ++ ++   ++Q +   +N++
Sbjct: 604 KEL---YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I      G    A   F  +   G +PDV TY+ +   L +QG L+E    +  + + G 
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
             +     +I++ L   GDI +A  +L  + EK    E    ++ +D
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 158/352 (44%), Gaps = 8/352 (2%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MR  G     L  D   +  VI  LC  G++  A+    +MI +   P  + +N L++ L
Sbjct: 400 MRQQG-----LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           C     +KA  +I EM +     +   +N+ I  +C+   + ++  LF  M   G++P+ 
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 514

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           +T++ L+   C  G + +A K L  +++        D +T   L++ Y K      AL L
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVG---MKPDCVTYNTLINGYCKISRMEDALVL 571

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           + +M    +  DI+ YN+++ G       ++A   +  + + G   ++ TYN +L+ LCK
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
               DEA   +  L  T +  +  ++  +I  L   G   +A++   ++    +VP+   
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
           ++++ +     G L     +   M   G ++N    N+++    + G I  A
Sbjct: 692 YSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score = 46.2 bits (108), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 5/151 (3%)

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML---LDGIFPDVFTYN 475
           +A  + D +L  G  ++++  N   LA+    S   A S    M     D + P++ TY 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNC-ALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE-VFAKIQT 534
           +L+G+ C  G + L       ++++G   D I +T ++KG CA     +A + V  ++  
Sbjct: 96  ILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           LG   +   + IL K       S +A ++ Q
Sbjct: 156 LGCIPNVFSYNILLKGLCDDNRSQEALELLQ 186


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 244/520 (46%), Gaps = 53/520 (10%)

Query: 88  NALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           +A+D++L+  +  L  M D     CT+         +++ LC   +   AL L   M   
Sbjct: 140 DAMDIVLRR-MTELSCMPDV--FSCTI---------LLKGLCDENRSQEALELLHMMADD 187

Query: 148 ---GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
              G+ PDV+++  ++N   K GD +KA     EM + R SP+  TY++ I   C+   +
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAM 247

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           DKA+ + +TM  NG+ PN +T+N ++H  C      +A+ FL ++ +D       DV+T 
Sbjct: 248 DKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG---VEPDVVTY 304

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG-------------- 310
             LMD   KNG   +A  +++ M ++ ++ DI  Y  L+ G+   G              
Sbjct: 305 NSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVR 364

Query: 311 ---------------------DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
                                 +  A   F +M + G  P+V+TY  ++  LCK G +D+
Sbjct: 365 NGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDD 424

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A  ++  +   G+ P+ I Y ++I  LCI     KA E +L ML++ +      +N II 
Sbjct: 425 AMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIH 484

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
            + + G +  +  + DLM+  GV  NV T++ LI      G + +A  L   M   G+ P
Sbjct: 485 SHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP 544

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D  TYN LI   C +  +  AL L+ EM+  G++P+IITY  +++G         A+E++
Sbjct: 545 DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 604

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
             I   G  ++   + I+     +   +D+A  + Q   L
Sbjct: 605 VGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 644



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 224/471 (47%), Gaps = 42/471 (8%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHVIREMSEMRPSPN 187
           C  G++         +++KG   + +T   L+  LC       A D V+R M+E+   P+
Sbjct: 98  CRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPD 157

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANN---GIRPNRVTHNILVHALCKKGLLGDAVK 244
             +    + G C  N   +AL L   MA++   G  P+ V++  +++   K+G    A  
Sbjct: 158 VFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYS 217

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              E+L   D + + DV+T + ++ +  K     +A+ +   M +  +  + + YN +++
Sbjct: 218 TYHEML---DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILH 274

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G+C +     A  +  +M   G  PDV+TYN+L++ LCK G+  EA   +  ++K G+ P
Sbjct: 275 GYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEP 334

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D  +Y T++QG    G +V+    L  M+   + P+ H++N++I  Y +   +  A  + 
Sbjct: 335 DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVF 394

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY---------- 474
             M   G++ NV T+ A+I    + GS+ DA    ++M+ +G+ P++  Y          
Sbjct: 395 SKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIF 454

Query: 475 -------------------------NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
                                    N +I + C  G +  + +L+D M+R G+ P++ITY
Sbjct: 455 DKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITY 514

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           + LI G+C  G M EA ++ + + ++G+  D + +  L   Y R+   D A
Sbjct: 515 STLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 202/417 (48%), Gaps = 4/417 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P V T+  L+   C+ G L+     +  + +        T+   + G C       A+ +
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 211 -FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
               M      P+  +  IL+  LC +    +A++ L  +  D  G +  DV++ T +++
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
            +FK GD  +A + +++M  + I  D+V Y+ +I   C    +  A      M+K G +P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           + +TYN++L+  C   +  EA  F   +   GV PD ++Y +++  LC +G   +AR+  
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
            SM ++ + P+   +  ++ GY   G L    ++ DLM+  G+  +   FN LI A  + 
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             + +A  +  +M   G+ P+V TY  +IG  C  G +  A+  +++M+  G+TP+II Y
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARDI 563
           T LI   C      +AEE+  ++   G+ ++ I F  +   +    R+ ES+K  D+
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDL 501



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 119/496 (23%), Positives = 210/496 (42%), Gaps = 102/496 (20%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI      G    A     +M+ +   PDV+T++ ++  LCK   ++KA  V+
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVL 254

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M +    PNC TYN+ + GYC   +  +A+     M ++G+ P+ VT+N L+  LCK 
Sbjct: 255 TTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKN 314

Query: 237 GLLGDAVKFLGEV----LADD--------DGKATSDVITS-------------------- 264
           G   +A K    +    L  D         G AT   +                      
Sbjct: 315 GRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVF 374

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
            IL+ +Y K     +A+ +++ M Q  +  ++V Y  +I   C +G +  A  YF QM+ 
Sbjct: 375 NILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMID 434

Query: 325 RGFLPDVITYNTLLNCLC-----------------------------------KQGKLDE 349
            G  P++I Y +L++ LC                                   K+G++ E
Sbjct: 435 EGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIE 494

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           +   + ++ + GV P+ I+Y T+I G C+ G + +A + L SM    + P+   +N +I+
Sbjct: 495 SEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN 554

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN----------------ALILAETRGGSIF 453
           GY R   + +A ++   M+S GVS N+ T+N                 L +  T+ G+  
Sbjct: 555 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQL 614

Query: 454 D-------------------AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +                   A  + + + L  +  +  T+N++IGA   +G    A  L+
Sbjct: 615 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 674

Query: 495 DEMLRRGITPDIITYT 510
             +   G+ PD+ TY+
Sbjct: 675 AALSANGLVPDVRTYS 690



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 192/422 (45%), Gaps = 9/422 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE D   +  +++     G +     L   M++ G  PD    N L+   C     EK D
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILI---CAYAKQEKVD 388

Query: 174 HVIREMSEMRP---SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
             +   S+MR    +PN  TY A I   C+   +D A+  F  M + G+ PN + +  L+
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           H+LC       A + + E+L  D G   + +  ++I+  S+ K G   ++  L++ M + 
Sbjct: 449 HSLCIFDKWDKAEELILEML--DRGICLNTIFFNSII-HSHCKEGRVIESEKLFDLMVRI 505

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            ++ +++ Y+ LI+G+CL G +  A      M   G  PD +TYNTL+N  C+  ++D+A
Sbjct: 506 GVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +  +  +GV+P+ I+Y  I+QGL        A+E  + + +     E   +N+I+ G
Sbjct: 566 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHG 625

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             +      A  +   +    +     TFN +I A  + G   +A  L   +  +G+ PD
Sbjct: 626 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 685

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V TY+L+       G +     L+  M   G T +      +++    RG++  A    +
Sbjct: 686 VRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLS 745

Query: 531 KI 532
            I
Sbjct: 746 MI 747



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 134/273 (49%), Gaps = 3/273 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G++  +  L   M++ G  P+V+T++ L++  C  G +++A  ++  M  +
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV 540

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+C TYN  I GYCRV+ +D AL LF  M ++G+ PN +T+NI++  L        A
Sbjct: 541 GMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 600

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +     +         ++ T  I++    KN    +AL ++ ++   ++Q +   +N++
Sbjct: 601 KELY---VGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 657

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I      G    A   F  +   G +PDV TY+ +   L +QG L+E    +  + + G 
Sbjct: 658 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 717

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
             +     +I++ L   GDI +A  +L  + EK
Sbjct: 718 TANSRMLNSIVRKLLQRGDITRAGTYLSMIDEK 750



 Score = 45.8 bits (107), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 4/171 (2%)

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           V P  H + ++I    R G L   F+    ++  G      TF  L+          DA 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 457 SLK-KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR---GITPDIITYTEL 512
            +  + M      PDVF+  +L+   C+      AL+L   M      G  PD+++YT +
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           I G    G+  +A   + ++    ++ D + +  +     + +  DKA ++
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEV 253


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 232/483 (48%), Gaps = 40/483 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKG--TVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           +++ LC   +   AL L + M   G    PDV+++  ++N   K GDL+KA     EM +
Sbjct: 168 LLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLD 227

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               PN  TY++ I   C+   +DKA+ + ++M  NG+ PN  T+N +VH  C  G   +
Sbjct: 228 RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+ FL ++ +D       DV+T   LMD   KNG   +A  +++ M ++ ++ +I  Y  
Sbjct: 288 AIGFLKKMHSDG---VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 302 LINGFCL-----------------------------------NGDISSAFAYFCQMLKRG 326
           L+ G+                                      G +  A   F +M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PD +TY T++  LCK G++++A  ++  +    ++P  I Y ++I  LCI     KA+
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E +L ML++ +  +   +N IID + + G +  +  + DLM+  GV  ++ T++ LI   
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + +A  L   M+  G+ PD  TYN LI   C +  +  AL L+ EM   G++PDI
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDI 584

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           ITY  +++G         A+E++  I   G  ++   + I+     +   +D+A  + Q 
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644

Query: 567 WLL 569
             L
Sbjct: 645 LCL 647



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 202/418 (48%), Gaps = 5/418 (1%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P++ T+  L+   C  G L+     +  + +     +   +   + G C       A+ 
Sbjct: 88  TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147

Query: 210 L-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           +    M   G  PN  ++NIL+  LC +    +A++ L +++ DD G    DV++ T ++
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL-QMMPDDGGDCPPDVVSYTTVI 206

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           + +FK GD  +A   +++M  + I  ++V Y+ +I   C    +  A      M+K G +
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+  TYN++++  C  G+  EA  F   +   GV PD ++Y +++  LC +G   +AR+ 
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
             SM ++ + PE   +  ++ GY   G L     + DLM+  G+  N + F+ LI A  +
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +  A  +  +M   G+ PD  TY  +IG  C  G +  A++ +++M+   ++P  I 
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARDI 563
           Y  LI   C      +A+E+  ++   G+ +D I F  +   +    R+ ES+K  D+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/518 (24%), Positives = 222/518 (42%), Gaps = 105/518 (20%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L+ L+ M D G        D   +  VI      G +  A     +M+ +G +P+V+
Sbjct: 179 QEALELLQMMPDDGG---DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVV 235

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++ ++  LCK   ++KA  V+  M +    PNC TYN+ + GYC   +  +A+     M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD------------DGKATSDVI 262
            ++G+ P+ VT+N L+  LCK G   +A K    +                 G AT   +
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 263 TS--------------------TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                 +IL+ +Y K G   QA+ +++ M Q+ +  D V Y  +
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 303 INGFCLNGDISSAFAYFCQM-----------------------------------LKRGF 327
           I   C +G +  A  YF QM                                   L RG 
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             D I +N++++  CK+G++ E+   + ++ + GV PD I+Y T+I G C+ G + +A +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--LA 445
            L SM+   + P+   +N +I+GY +   + +A  +   M S GVS ++ T+N ++  L 
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595

Query: 446 ETR--------------GGSIFD-------------------AFSLKKEMLLDGIFPDVF 472
           +TR               G+  +                   A  + + + L  +  +  
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           T+N++IGA   +G    A  L+  +   G+ PD+ TY+
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 201/474 (42%), Gaps = 67/474 (14%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R + +++   C  G+   A+   +KM   G  PDV+T+N L++ LCK G   +A  +   
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 179 MSEMRPSPNCATYNAFITGYC-----------------------------------RVNE 203
           M++    P   TY   + GY                                    +  +
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD---------- 253
           +D+A+ +FS M   G+ P+ VT+  ++  LCK G + DA+++  +++ +           
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 254 ----------------------DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
                                 D     D I    ++DS+ K G   ++  L++ M +  
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           ++ DI+ Y+ LI+G+CL G +  A      M+  G  PD +TYNTL+N  CK  ++++A 
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
             +  +  +GV+PD I+Y  I+QGL        A+E  + + E     E   +N+I+ G 
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +      A  +   +    +     TFN +I A  + G   +A  L   +  +G+ PDV
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 689

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            TY+L+       G +     L+  M   G T +      +++    RG++  A
Sbjct: 690 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 41/328 (12%)

Query: 280 ALALWNDMFQK---NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF--------- 327
           A++ +N M +     +  ++  Y +LI   C  G +   FA    ++K+GF         
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 328 ---------------------------LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
                                      +P+V +YN LL  LC + +  EA     ++   
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 361 G--VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           G    PD +SY T+I G    GD+ KA      ML++ ++P    ++ II    +   + 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   M+  GV  N  T+N+++      G   +A    K+M  DG+ PDV TYN L+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G    A +++D M +RG+ P+I TY  L++G+  +G + E   +   +   G+ 
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQK 566
            +H  F IL   Y +  + D+A  +  K
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSK 399



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 141/287 (49%), Gaps = 3/287 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G++  +  L   M++ G  PD++T++ L++  C  G +++A  ++  M  +
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+C TYN  I GYC+++ ++ AL LF  M ++G+ P+ +T+NI++  L +      A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +     +   +     ++ T  I++    KN    +AL ++ ++   ++Q +   +N++
Sbjct: 604 KELY---VGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I      G    A   F  +   G +PDV TY+ +   L +QG L+E    +  + + G 
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
             +     +I++ L   GDI +A  +L  + EK    E    ++ +D
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 158/352 (44%), Gaps = 8/352 (2%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MR  G     L  D   +  VI  LC  G++  A+    +MI +   P  + +N L++ L
Sbjct: 400 MRQQG-----LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           C     +KA  +I EM +     +   +N+ I  +C+   + ++  LF  M   G++P+ 
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 514

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           +T++ L+   C  G + +A K L  +++        D +T   L++ Y K      AL L
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVG---MKPDCVTYNTLINGYCKISRMEDALVL 571

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           + +M    +  DI+ YN+++ G       ++A   +  + + G   ++ TYN +L+ LCK
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
               DEA   +  L  T +  +  ++  +I  L   G   +A++   ++    +VP+   
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
           ++++ +     G L     +   M   G ++N    N+++    + G I  A
Sbjct: 692 YSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 5/151 (3%)

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML---LDGIFPDVFTYN 475
           +A  + D +L  G  ++++  N   LA+    S   A S    M     D + P++ TY 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNC-ALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE-VFAKIQT 534
           +LIG+ C  G + L       ++++G   D I +T L+KG CA     +A + V  ++  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           LG   +   + IL K       S +A ++ Q
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQ 186


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 208/411 (50%), Gaps = 3/411 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            L L  +M  KG  P+  T+N ++  LCK G + +A+ V+REM     +P+   Y   I 
Sbjct: 207 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 266

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G+C++  +  A  LF  M    I P+ +T+  ++  LC+ G + +A K   E++     +
Sbjct: 267 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK---R 323

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D +T T L+D Y K G   +A +L N M Q  +  +IV Y  L +G C  G++ +A 
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M ++G   ++ TYN+L+N LCK G +D+A      +   G  PD ++Y T++   
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C   ++V+A E L  ML++ + P    +NV+++G+   G L +   +   ML  G+  N 
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+N+LI       ++     + + M   G+ PD  TYN+LI   C   ++  A  L+ +
Sbjct: 504 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 563

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           M+ +G    + +Y  LIKG   R    EA E+F +++  GL  D   + I 
Sbjct: 564 MVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 614



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 223/467 (47%), Gaps = 18/467 (3%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK----GTVPDVLTHNYLVNELCKIGD 168
           T   D +    +I+D  +   +   +   RK+  K    G +  V + N  ++ L +  D
Sbjct: 137 TASKDLKMARKLIQDFWVNPNLDVGVSFARKLFDKMLNYGLLISVDSCNLFISHLSE--D 194

Query: 169 LE------KADHVIREMSEMRPS---PNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
           L+      K + V++ + EM+     PN  TYN  I   C+  ++ +A  +   M + GI
Sbjct: 195 LDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGI 254

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            P+ V +  L+   CK G +  A +   E+      K + D IT T ++    + G   +
Sbjct: 255 APDGVIYTTLIDGFCKLGNVSSAYRLFDEM---QKRKISPDFITYTAVICGLCQTGRVME 311

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  L+++M  K ++ D V Y  LI+G+C  G +  AF+   QML+ G  P+++TY  L +
Sbjct: 312 ADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALAD 371

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LCK G++D A+     + + G+  +  +Y +++ GLC  G+I +A + +  M      P
Sbjct: 372 GLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHP 431

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   +  ++D Y +  ++  A  +   ML   +   V TFN L+      G + D   L 
Sbjct: 432 DAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLL 491

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           K ML  GI P+  TYN LI   C   ++    ++Y  M  +G+ PD  TY  LIKGHC  
Sbjct: 492 KWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKA 551

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            NMKEA  +   +   G  +    +  L K + + K+  +AR++ ++
Sbjct: 552 RNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQ 598



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 199/421 (47%), Gaps = 38/421 (9%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            VI  LC  GK+  A  + R+MI +G  PD + +  L++  CK+G++  A  +  EM + 
Sbjct: 228 GVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKR 287

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           + SP+  TY A I G C+   + +A  LF  M    + P+ VT+  L+   CK+G + +A
Sbjct: 288 KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEA 347

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                ++L       T +++T T L D   K G+   A  L ++M +K ++ +I  YN L
Sbjct: 348 FSLHNQML---QMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 303 INGFCLNGDISSAFAY----------------------FC-------------QMLKRGF 327
           +NG C  G+I  A                         +C             QML R  
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 464

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P V+T+N L+N  C  G L++       + + G+ P+  +Y ++I+  CI  ++    E
Sbjct: 465 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 524

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M  K VVP+ + +N++I G+ +  ++  A+ +   M+  G +  V ++NALI    
Sbjct: 525 IYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFY 584

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +     +A  L ++M  +G+  D   YN+    + + G + L L+L DE + + +  DI 
Sbjct: 585 KRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQ 644

Query: 508 T 508
           T
Sbjct: 645 T 645



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 125/250 (50%)

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +M  +G  P+  TYN ++  LCK GK+ EA      +   G+APD + Y T+I G C  G
Sbjct: 213 EMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLG 272

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
           ++  A      M ++ + P+   +  +I G  + G +  A  +   M+   +  +  T+ 
Sbjct: 273 NVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYT 332

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           ALI    + G + +AFSL  +ML  G+ P++ TY  L    C  G +  A +L  EM R+
Sbjct: 333 ALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK 392

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G+  +I TY  L+ G C  GN+ +A ++   ++  G   D + +  L   Y + +E  +A
Sbjct: 393 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRA 452

Query: 561 RDIHQKWLLR 570
            ++ ++ L R
Sbjct: 453 HELLRQMLDR 462


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 227/459 (49%), Gaps = 16/459 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+      + G A+ + ++M ++G  PD+  +N L+  L K   +++A   + EM 
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TY AFI+GY   +E   A      M   G+ PN+V    L++  CKKG + 
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A      ++   D     D  T T+LM+  FKN     A  ++ +M  K I  D+ +Y 
Sbjct: 575 EACSAYRSMV---DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           VLINGF   G++  A + F +M++ G  P+VI YN LL   C+ G++++A      +S  
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+ ++Y TII G C  GD+ +A      M  K +VP+  ++  ++DG  R  D+  A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML---LDGIF-----PDVF 472
            +I       G +S+   FNALI    +    F    LK E+L   +DG F     P+  
Sbjct: 752 ITIFGTNKK-GCASSTAPFNALINWVFK----FGKTELKTEVLNRLMDGSFDRFGKPNDV 806

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TYN++I   C  G++  A +L+ +M    + P +ITYT L+ G+   G   E   VF + 
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
              G+  DHI + ++   + +   + KA  +  +   +N
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 190/404 (47%), Gaps = 4/404 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           MI  G +P    +  L+   C+  ++ +   ++ EM +     +  TY   + G C   +
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           LD A ++   M  +G RPN V +  L+    +    GDA++ L E+   + G A  D+  
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM--KEQGIA-PDIFC 489

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              L+    K     +A +   +M +  ++ +   Y   I+G+    + +SA  Y  +M 
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           + G LP+ +    L+N  CK+GK+ EA   Y  +   G+  D  +Y  ++ GL  +  + 
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A E    M  K + P+   + V+I+G+ + G++  A SI D M+  G++ NV  +N L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               R G I  A  L  EM + G+ P+  TY  +I   C  G +  A +L+DEM  +G+ 
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           PD   YT L+ G C   +++ A  +F   +  G A    PF  L
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNAL 772



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 200/431 (46%), Gaps = 11/431 (2%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL L+  MI KG VP   T++ L++ LCKI  LE A  ++ EM  +  S +  TY+  I 
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G  +    D A  L   M ++GI      ++  +  + K+G++  A           DG 
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF-------DGM 373

Query: 257 ATSDVITST----ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
             S +I        L++ Y +  +  Q   L  +M ++NI      Y  ++ G C +GD+
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A+    +M+  G  P+V+ Y TL+    +  +  +A      + + G+APD   Y ++
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I GL     + +AR FL+ M+E  + P    +   I GY    + ++A      M   GV
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             N      LI    + G + +A S  + M+  GI  D  TY +L+        +  A +
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           ++ EM  +GI PD+ +Y  LI G    GNM++A  +F ++   GL  + I + +L   + 
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673

Query: 553 RMKESDKARDI 563
           R  E +KA+++
Sbjct: 674 RSGEIEKAKEL 684



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 222/476 (46%), Gaps = 8/476 (1%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLET-----DYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           +L + L ++K + D   +   +++     D   +  +I  L  G     A  L  +M+  
Sbjct: 282 VLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH 341

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G       ++  +  + K G +EKA  +   M      P    Y + I GYCR   + + 
Sbjct: 342 GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M    I  +  T+  +V  +C  G L  A   + E++A        +V+  T L
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG---CRPNVVIYTTL 458

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           + ++ +N     A+ +  +M ++ I  DI  YN LI G      +  A ++  +M++ G 
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+  TY   ++   +  +   A  +   + + GV P+++    +I   C  G +++A  
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
              SM+++ ++ +   + V+++G  +   + +A  I   M   G++ +VF++  LI   +
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G++  A S+  EM+ +G+ P+V  YN+L+G  C  G I  A +L DEM  +G+ P+ +
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           TY  +I G+C  G++ EA  +F +++  GL  D   +  L     R+ + ++A  I
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 200/443 (45%), Gaps = 29/443 (6%)

Query: 101 LKTMRDTG----PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           +K MR+ G     V CT          +I + C  GK+  A    R M+ +G + D  T+
Sbjct: 545 VKEMRECGVLPNKVLCT---------GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
             L+N L K   ++ A+ + REM     +P+  +Y   I G+ ++  + KA  +F  M  
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G+ PN + +N+L+   C+ G +  A + L E+          + +T   ++D Y K+GD
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG---LHPNAVTYCTIIDGYCKSGD 712

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A  L+++M  K +  D   Y  L++G C   D+  A   F    K+G       +N 
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNA 771

Query: 337 LLNCLCKQGKLDEASHFY-----GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           L+N + K GK +  +        G   + G  P+ ++Y  +I  LC  G++  A+E    
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M   +++P    +  +++GY + G  +  F + D  ++ G+  +   ++ +I A  + G 
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890

Query: 452 IFDAFSLKKEMLL-----DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              A  L  +M       DG    + T   L+     +G + +A ++ + M+R    PD 
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950

Query: 507 ITYTELIKGHCARGNMK-EAEEV 528
            T  ELI   C   N + EA+ V
Sbjct: 951 ATVIELINESCISSNQRVEADAV 973



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/426 (23%), Positives = 187/426 (43%), Gaps = 19/426 (4%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI-REMSEMRPSPNCATYNAFITGYCR 200
           + M+++  V DV T++ L+   C+ G+++    V+ +   E R     AT N        
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRT----ATLN-------- 257

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
              +D AL L  +M   G+ P + T+++L+  LCK   L DA   L E+   D    + D
Sbjct: 258 ---VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM---DSLGVSLD 311

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
             T ++L+D   K  +   A  L ++M    I      Y+  I      G +  A A F 
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            M+  G +P    Y +L+   C++  + +       + K  +     +Y T+++G+C  G
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
           D+  A   +  M+     P   I+  +I  + +     +A  +   M   G++ ++F +N
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           +LI+  ++   + +A S   EM+ +G+ P+ FTY   I           A +   EM   
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G+ P+ +  T LI  +C +G + EA   +  +   G+  D   + +L     +  + D A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 561 RDIHQK 566
            +I ++
Sbjct: 612 EEIFRE 617



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 108/475 (22%), Positives = 190/475 (40%), Gaps = 78/475 (16%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT--------- 196
           QK T   + + ++L  +LC  G  EKA  V+  M E R  P    +++ +          
Sbjct: 90  QKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIE-RNWPVAEVWSSIVRCSQEFVGKS 148

Query: 197 -----------GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG---LLGDA 242
                      GY     +++A+ +FS+     + P      +L+ AL +     L  D 
Sbjct: 149 DDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDV 208

Query: 243 VKFLGEVLADDDGKATSDVITS-------TILMDSYFKNGDKFQ--------ALALWNDM 287
            K + E     D K    +I +        +  D  FK   +F+        AL L   M
Sbjct: 209 YKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESM 268

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN-------- 339
             K +      Y+VLI+G C    +  A +   +M   G   D  TY+ L++        
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328

Query: 340 ------------------------CLC---KQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
                                   C+C   K+G +++A   +  +  +G+ P   +Y ++
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I+G C   ++ +  E L+ M ++++V  P+ +  ++ G    GDL  A++I   M++ G 
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             NV  +  LI    +     DA  + KEM   GI PD+F YN LI        +  A  
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
              EM+  G+ P+  TY   I G+        A++   +++  G+    +P ++L
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV----LPNKVL 559



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/309 (21%), Positives = 119/309 (38%), Gaps = 49/309 (15%)

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D V + +L +G+     I  A   F   +    +P +     LL+ L +  +LD     Y
Sbjct: 150 DGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + +  V  D  +Y  +I   C  G++   ++ L    EK    E     + +DG    
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKT-EK----EFRTATLNVDG---- 260

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
                A  +++ M+  G+    +T++ LI    +   + DA SL  EM   G+  D  TY
Sbjct: 261 -----ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY 315

Query: 475 NLLI-------GASCNLGHIH----------------------------LALQLYDEMLR 499
           +LLI        A    G +H                             A  L+D M+ 
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIA 375

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G+ P    Y  LI+G+C   N+++  E+  +++   + I    +  + K      + D 
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG 435

Query: 560 ARDIHQKWL 568
           A +I ++ +
Sbjct: 436 AYNIVKEMI 444


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 217/438 (49%), Gaps = 7/438 (1%)

Query: 114 LETDYRRHVA----VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +E  YR +V     +I  LCL G++  AL L  +M++ G   + +T+  ++N +CK G+ 
Sbjct: 166 VEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNT 225

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A  + R+M E     +   Y+  I   C+   LD AL LF+ M   GI+ + V ++ +
Sbjct: 226 ALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSI 285

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LC  G   D  K L E++  +      +V+T + L+D + K G   +A  L+N+M  
Sbjct: 286 IGGLCNDGRWDDGAKMLREMIGRN---IIPNVVTFSALIDVFVKEGKLLEAKELYNEMVA 342

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           + I  D + Y+ LI+GFC    +  A      M+ +G  P+++TY+ L+N  CK  ++D 
Sbjct: 343 RGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDN 402

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
               +  +S  G+  D ++Y T++QG C  G +  A+E    M+ + V P    + +++D
Sbjct: 403 GMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLD 462

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G    G+L  A  I + M    +   +  +N +I        + DA+SL   + + G+ P
Sbjct: 463 GLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKP 522

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           DV TYN++IG  C  G +  A  L+ +M   G  P   TY  LI+ H     +  + E+ 
Sbjct: 523 DVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELI 582

Query: 530 AKIQTLGLAIDHIPFRIL 547
            +++  G A D    +++
Sbjct: 583 EEMKMRGFAADASTIKMV 600



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 226/459 (49%), Gaps = 38/459 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C   K+  A  +  + ++ G  P+ +T + L+N  C  G + +A  ++  M EM+
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T N  I G C    + +AL L   M   G   N +T+  +++ +CK G    A+
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               ++   ++    + V+  +I++DS  K+G+   AL+L+N+M  K I+ D+VAY+ +I
Sbjct: 230 DLFRKM---EERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSII 286

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C +G          +M+ R  +P+V+T++ L++   K+GKL EA   Y  +   G+A
Sbjct: 287 GGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIA 346

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD I+Y ++I G C    + +A + L  M+ K   P    ++++I+ Y +   + N   +
Sbjct: 347 PDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRL 406

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              + S G+ ++  T+N L+    + G +  A  L +EM+  G+ P V TY +L+   C+
Sbjct: 407 FCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCD 466

Query: 484 LGHIHLALQLYDEMLR-----------------------------------RGITPDIIT 508
            G +  AL+++++M +                                   +G+ PD++T
Sbjct: 467 NGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLT 526

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           Y  +I G C +G++ EA+ +F K++  G A     + IL
Sbjct: 527 YNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNIL 565



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 212/493 (43%), Gaps = 104/493 (21%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEK------------ADHVIREMSEMRPSPNCAT 190
           ++I KGT+   L H   ++E  K+   E+            A  +   M + RP P+   
Sbjct: 13  QIIDKGTLRISLLHYSCISE-AKVSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLID 71

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK-------GLLGDAV 243
           ++   +   R  E D  L     M  NGI  N  T NI+++  C+K        ++G A+
Sbjct: 72  FSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRAL 131

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           KF  E           + IT + L++ +   G   +A+AL + M +   + ++V  N LI
Sbjct: 132 KFGFE----------PNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLI 181

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN------------------------ 339
           NG CL G ++ A     +M+K G   + ITY  +LN                        
Sbjct: 182 NGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIK 241

Query: 340 -----------CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC----------- 377
                       LCK G LD+A   +  +   G+  D ++Y +II GLC           
Sbjct: 242 ASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKM 301

Query: 378 ------------------------IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
                                     G +++A+E    M+ + + P+   ++ +IDG+ +
Sbjct: 302 LREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCK 361

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              L  A  + DLM+S G   N+ T++ LI +  +   + +   L  E+   G+  D  T
Sbjct: 362 ENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVT 421

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN L+   C  G +++A +L+ EM+ RG+ P ++TY  L+ G C  G +++A E+F K+Q
Sbjct: 422 YNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQ 481

Query: 534 ----TLGLAIDHI 542
                LG+ I +I
Sbjct: 482 KSRMILGIGIYNI 494



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 182/366 (49%), Gaps = 3/366 (0%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           +++    ++  VI  LC  G +  AL L  +M  KG   DV+ ++ ++  LC  G  +  
Sbjct: 239 SIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDG 298

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             ++REM      PN  T++A I  + +  +L +A  L++ M   GI P+ +T++ L+  
Sbjct: 299 AKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDG 358

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
            CK+  LG+A + L  +++        +++T +IL++SY K       + L+ ++  K +
Sbjct: 359 FCKENRLGEANQMLDLMVSKG---CEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGL 415

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D V YN L+ GFC +G ++ A   F +M+ RG  P V+TY  LL+ LC  G+L +A  
Sbjct: 416 VADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALE 475

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            +  + K+ +      Y  II G+C    +  A     S+  K V P+   +NV+I G  
Sbjct: 476 IFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLC 535

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           + G LS A  +   M   G + +  T+N LI A   G  +  +  L +EM + G   D  
Sbjct: 536 KKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADAS 595

Query: 473 TYNLLI 478
           T  +++
Sbjct: 596 TIKMVV 601



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 170/337 (50%), Gaps = 5/337 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   + ++I  LC  G+      + R+MI +  +P+V+T + L++   K G L +A 
Sbjct: 275 IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAK 334

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM     +P+  TY++ I G+C+ N L +A  +   M + G  PN VT++IL+++ 
Sbjct: 335 ELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSY 394

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   + + ++   E+ +       +D +T   L+  + ++G    A  L+ +M  + + 
Sbjct: 395 CKAKRVDNGMRLFCEISSKG---LVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVP 451

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             +V Y +L++G C NG++  A   F +M K   +  +  YN +++ +C   K+D+A   
Sbjct: 452 PSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSL 511

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY-G 412
           +  LS  GV PD ++Y  +I GLC  G + +A      M E    P    +N++I  + G
Sbjct: 512 FCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLG 571

Query: 413 RCGDLSNAFSIRDL-MLSFGVSSNVFTFNALILAETR 448
             G +S+   I ++ M  F   ++      ++L++ R
Sbjct: 572 GSGVISSVELIEEMKMRGFAADASTIKMVVVMLSDGR 608


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 232/483 (48%), Gaps = 40/483 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKG--TVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           +++ LC   +   AL L + M   G    PDV+++  ++N   K GDL+KA     EM +
Sbjct: 168 LLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLD 227

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               PN  TY++ I   C+   +DKA+ + ++M  NG+ PN  T+N +VH  C  G   +
Sbjct: 228 RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+ FL ++ +D       DV+T   LMD   KNG   +A  +++ M ++ ++ +I  Y  
Sbjct: 288 AIGFLKKMHSDG---VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 302 LINGFCL-----------------------------------NGDISSAFAYFCQMLKRG 326
           L+ G+                                      G +  A   F +M ++G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PD +TY T++  LCK G++++A  ++  +    ++P  I Y ++I  LCI     KA+
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E +L ML++ +  +   +N IID + + G +  +  + DLM+  GV  ++ T++ LI   
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + +A  L   M+  G+ PD  TYN LI   C +  +  AL L+ EM   G++PDI
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDI 584

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           ITY  +++G         A+E++  I   G  ++   + I+     +   +D+A  + Q 
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQN 644

Query: 567 WLL 569
             L
Sbjct: 645 LCL 647



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 202/418 (48%), Gaps = 5/418 (1%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P++ T+  L+   C  G L+     +  + +     +   +   + G C       A+ 
Sbjct: 88  TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147

Query: 210 L-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           +    M   G  PN  ++NIL+  LC +    +A++ L +++ DD G    DV++ T ++
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL-QMMPDDGGDCPPDVVSYTTVI 206

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           + +FK GD  +A   +++M  + I  ++V Y+ +I   C    +  A      M+K G +
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+  TYN++++  C  G+  EA  F   +   GV PD ++Y +++  LC +G   +AR+ 
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
             SM ++ + PE   +  ++ GY   G L     + DLM+  G+  N + F+ LI A  +
Sbjct: 327 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAK 386

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +  A  +  +M   G+ PD  TY  +IG  C  G +  A++ +++M+   ++P  I 
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARDI 563
           Y  LI   C      +A+E+  ++   G+ +D I F  +   +    R+ ES+K  D+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/518 (24%), Positives = 222/518 (42%), Gaps = 105/518 (20%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L+ L+ M D G        D   +  VI      G +  A     +M+ +G +P+V+
Sbjct: 179 QEALELLQMMPDDGG---DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVV 235

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++ ++  LCK   ++KA  V+  M +    PNC TYN+ + GYC   +  +A+     M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD------------DGKATSDVI 262
            ++G+ P+ VT+N L+  LCK G   +A K    +                 G AT   +
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 263 TS--------------------TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                 +IL+ +Y K G   QA+ +++ M Q+ +  D V Y  +
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 303 INGFCLNGDISSAFAYFCQM-----------------------------------LKRGF 327
           I   C +G +  A  YF QM                                   L RG 
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             D I +N++++  CK+G++ E+   + ++ + GV PD I+Y T+I G C+ G + +A +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--LA 445
            L SM+   + P+   +N +I+GY +   + +A  +   M S GVS ++ T+N ++  L 
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595

Query: 446 ETR--------------GGSIFD-------------------AFSLKKEMLLDGIFPDVF 472
           +TR               G+  +                   A  + + + L  +  +  
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           T+N++IGA   +G    A  L+  +   G+ PD+ TY+
Sbjct: 656 TFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 201/474 (42%), Gaps = 67/474 (14%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R + +++   C  G+   A+   +KM   G  PDV+T+N L++ LCK G   +A  +   
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 179 MSEMRPSPNCATYNAFITGYC-----------------------------------RVNE 203
           M++    P   TY   + GY                                    +  +
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD---------- 253
           +D+A+ +FS M   G+ P+ VT+  ++  LCK G + DA+++  +++ +           
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 254 ----------------------DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
                                 D     D I    ++DS+ K G   ++  L++ M +  
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           ++ DI+ Y+ LI+G+CL G +  A      M+  G  PD +TYNTL+N  CK  ++++A 
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
             +  +  +GV+PD I+Y  I+QGL        A+E  + + E     E   +N+I+ G 
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +      A  +   +    +     TFN +I A  + G   +A  L   +  +G+ PDV
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 689

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            TY+L+       G +     L+  M   G T +      +++    RG++  A
Sbjct: 690 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 143/329 (43%), Gaps = 41/329 (12%)

Query: 280 ALALWNDMFQK---NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF--------- 327
           A++ +N M +     +  ++  Y +LI   C  G +   FA    ++K+GF         
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 328 ---------------------------LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
                                      +P+V +YN LL  LC + +  EA     ++   
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 361 G--VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           G    PD +SY T+I G    GD+ KA      ML++ ++P    ++ II    +   + 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   M+  GV  N  T+N+++      G   +A    K+M  DG+ PDV TYN L+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G    A +++D M +RG+ P+I TY  L++G+  +G + E   +   +   G+ 
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKW 567
            +H  F IL   Y +  + D+A  +  K 
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKM 400



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 141/287 (49%), Gaps = 3/287 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G++  +  L   M++ G  PD++T++ L++  C  G +++A  ++  M  +
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+C TYN  I GYC+++ ++ AL LF  M ++G+ P+ +T+NI++  L +      A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +     +   +     ++ T  I++    KN    +AL ++ ++   ++Q +   +N++
Sbjct: 604 KEL---YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I      G    A   F  +   G +PDV TY+ +   L +QG L+E    +  + + G 
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
             +     +I++ L   GDI +A  +L  + EK    E    ++ +D
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD 767



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 158/352 (44%), Gaps = 8/352 (2%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MR  G     L  D   +  VI  LC  G++  A+    +MI +   P  + +N L++ L
Sbjct: 400 MRQQG-----LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           C     +KA  +I EM +     +   +N+ I  +C+   + ++  LF  M   G++P+ 
Sbjct: 455 CIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 514

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           +T++ L+   C  G + +A K L  +++        D +T   L++ Y K      AL L
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVG---MKPDCVTYNTLINGYCKISRMEDALVL 571

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           + +M    +  DI+ YN+++ G       ++A   +  + + G   ++ TYN +L+ LCK
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
               DEA   +  L  T +  +  ++  +I  L   G   +A++   ++    +VP+   
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
           ++++ +     G L     +   M   G ++N    N+++    + G I  A
Sbjct: 692 YSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 5/151 (3%)

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML---LDGIFPDVFTYN 475
           +A  + D +L  G  ++++  N   LA+    S   A S    M     D + P++ TY 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNC-ALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE-VFAKIQT 534
           +LIG+ C  G + L       ++++G   D I +T L+KG CA     +A + V  ++  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           LG   +   + IL K       S +A ++ Q
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQ 186


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 227/459 (49%), Gaps = 16/459 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+      + G A+ + ++M ++G  PD+  +N L+  L K   +++A   + EM 
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TY AFI+GY   +E   A      M   G+ PN+V    L++  CKKG + 
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A      ++   D     D  T T+LM+  FKN     A  ++ +M  K I  D+ +Y 
Sbjct: 575 EACSAYRSMV---DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           VLINGF   G++  A + F +M++ G  P+VI YN LL   C+ G++++A      +S  
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+ ++Y TII G C  GD+ +A      M  K +VP+  ++  ++DG  R  D+  A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML---LDGIF-----PDVF 472
            +I       G +S+   FNALI    +    F    LK E+L   +DG F     P+  
Sbjct: 752 ITIFGTNKK-GCASSTAPFNALINWVFK----FGKTELKTEVLNRLMDGSFDRFGKPNDV 806

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TYN++I   C  G++  A +L+ +M    + P +ITYT L+ G+   G   E   VF + 
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
              G+  DHI + ++   + +   + KA  +  +   +N
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 190/404 (47%), Gaps = 4/404 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           MI  G +P    +  L+   C+  ++ +   ++ EM +     +  TY   + G C   +
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           LD A ++   M  +G RPN V +  L+    +    GDA++ L E+   + G A  D+  
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM--KEQGIA-PDIFC 489

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              L+    K     +A +   +M +  ++ +   Y   I+G+    + +SA  Y  +M 
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           + G LP+ +    L+N  CK+GK+ EA   Y  +   G+  D  +Y  ++ GL  +  + 
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A E    M  K + P+   + V+I+G+ + G++  A SI D M+  G++ NV  +N L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               R G I  A  L  EM + G+ P+  TY  +I   C  G +  A +L+DEM  +G+ 
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           PD   YT L+ G C   +++ A  +F   +  G A    PF  L
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNAL 772



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 200/431 (46%), Gaps = 11/431 (2%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL L+  MI KG VP   T++ L++ LCKI  LE A  ++ EM  +  S +  TY+  I 
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G  +    D A  L   M ++GI      ++  +  + K+G++  A           DG 
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF-------DGM 373

Query: 257 ATSDVITST----ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
             S +I        L++ Y +  +  Q   L  +M ++NI      Y  ++ G C +GD+
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A+    +M+  G  P+V+ Y TL+    +  +  +A      + + G+APD   Y ++
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I GL     + +AR FL+ M+E  + P    +   I GY    + ++A      M   GV
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             N      LI    + G + +A S  + M+  GI  D  TY +L+        +  A +
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           ++ EM  +GI PD+ +Y  LI G    GNM++A  +F ++   GL  + I + +L   + 
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673

Query: 553 RMKESDKARDI 563
           R  E +KA+++
Sbjct: 674 RSGEIEKAKEL 684



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 222/476 (46%), Gaps = 8/476 (1%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLET-----DYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           +L + L ++K + D   +   +++     D   +  +I  L  G     A  L  +M+  
Sbjct: 282 VLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH 341

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G       ++  +  + K G +EKA  +   M      P    Y + I GYCR   + + 
Sbjct: 342 GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M    I  +  T+  +V  +C  G L  A   + E++A        +V+  T L
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG---CRPNVVIYTTL 458

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           + ++ +N     A+ +  +M ++ I  DI  YN LI G      +  A ++  +M++ G 
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+  TY   ++   +  +   A  +   + + GV P+++    +I   C  G +++A  
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
              SM+++ ++ +   + V+++G  +   + +A  I   M   G++ +VF++  LI   +
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G++  A S+  EM+ +G+ P+V  YN+L+G  C  G I  A +L DEM  +G+ P+ +
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           TY  +I G+C  G++ EA  +F +++  GL  D   +  L     R+ + ++A  I
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 200/443 (45%), Gaps = 29/443 (6%)

Query: 101 LKTMRDTG----PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           +K MR+ G     V CT          +I + C  GK+  A    R M+ +G + D  T+
Sbjct: 545 VKEMRECGVLPNKVLCT---------GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTY 595

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
             L+N L K   ++ A+ + REM     +P+  +Y   I G+ ++  + KA  +F  M  
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G+ PN + +N+L+   C+ G +  A + L E+          + +T   ++D Y K+GD
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG---LHPNAVTYCTIIDGYCKSGD 712

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A  L+++M  K +  D   Y  L++G C   D+  A   F    K+G       +N 
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNA 771

Query: 337 LLNCLCKQGKLDEASHFY-----GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           L+N + K GK +  +        G   + G  P+ ++Y  +I  LC  G++  A+E    
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M   +++P    +  +++GY + G  +  F + D  ++ G+  +   ++ +I A  + G 
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890

Query: 452 IFDAFSLKKEMLL-----DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              A  L  +M       DG    + T   L+     +G + +A ++ + M+R    PD 
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950

Query: 507 ITYTELIKGHCARGNMK-EAEEV 528
            T  ELI   C   N + EA+ V
Sbjct: 951 ATVIELINESCISSNQRVEADAV 973



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/426 (23%), Positives = 187/426 (43%), Gaps = 19/426 (4%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI-REMSEMRPSPNCATYNAFITGYCR 200
           + M+++  V DV T++ L+   C+ G+++    V+ +   E R     AT N        
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRT----ATLN-------- 257

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
              +D AL L  +M   G+ P + T+++L+  LCK   L DA   L E+   D    + D
Sbjct: 258 ---VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM---DSLGVSLD 311

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
             T ++L+D   K  +   A  L ++M    I      Y+  I      G +  A A F 
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            M+  G +P    Y +L+   C++  + +       + K  +     +Y T+++G+C  G
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
           D+  A   +  M+     P   I+  +I  + +     +A  +   M   G++ ++F +N
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           +LI+  ++   + +A S   EM+ +G+ P+ FTY   I           A +   EM   
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G+ P+ +  T LI  +C +G + EA   +  +   G+  D   + +L     +  + D A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 561 RDIHQK 566
            +I ++
Sbjct: 612 EEIFRE 617



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 108/475 (22%), Positives = 190/475 (40%), Gaps = 78/475 (16%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT--------- 196
           QK T   + + ++L  +LC  G  EKA  V+  M E R  P    +++ +          
Sbjct: 90  QKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIE-RNWPVAEVWSSIVRCSQEFVGKS 148

Query: 197 -----------GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG---LLGDA 242
                      GY     +++A+ +FS+     + P      +L+ AL +     L  D 
Sbjct: 149 DDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDV 208

Query: 243 VKFLGEVLADDDGKATSDVITS-------TILMDSYFKNGDKFQ--------ALALWNDM 287
            K + E     D K    +I +        +  D  FK   +F+        AL L   M
Sbjct: 209 YKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESM 268

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN-------- 339
             K +      Y+VLI+G C    +  A +   +M   G   D  TY+ L++        
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328

Query: 340 ------------------------CLC---KQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
                                   C+C   K+G +++A   +  +  +G+ P   +Y ++
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I+G C   ++ +  E L+ M ++++V  P+ +  ++ G    GDL  A++I   M++ G 
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             NV  +  LI    +     DA  + KEM   GI PD+F YN LI        +  A  
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
              EM+  G+ P+  TY   I G+        A++   +++  G+    +P ++L
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV----LPNKVL 559



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 120/309 (38%), Gaps = 49/309 (15%)

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D V + +L +G+   G I  A   F   +    +P +     LL+ L +  +LD     Y
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + +  V  D  +Y  +I   C  G++   ++ L    EK    E     + +DG    
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKT-EK----EFRTATLNVDG---- 260

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
                A  +++ M+  G+    +T++ LI    +   + DA SL  EM   G+  D  TY
Sbjct: 261 -----ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY 315

Query: 475 NLLI-------GASCNLGHIH----------------------------LALQLYDEMLR 499
           +LLI        A    G +H                             A  L+D M+ 
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIA 375

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G+ P    Y  LI+G+C   N+++  E+  +++   + I    +  + K      + D 
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG 435

Query: 560 ARDIHQKWL 568
           A +I ++ +
Sbjct: 436 AYNIVKEMI 444


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 210/419 (50%), Gaps = 4/419 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  GK   +L+    ++ KG  PDV+    L+       ++EKA  V+ E+ E    P+ 
Sbjct: 79  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDV 137

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             YNA I+G+C+VN ++ A  + + M   G  P+ VT+NI++ +LC +  LG A+K L +
Sbjct: 138 FAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQ 197

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +L D+       VIT TIL+++    G   +A+ L  +M  + +  D+  YN +I G C 
Sbjct: 198 LLLDN---CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G +  A      +  +G  PDVI+YN LL     QGK DE       +   G  P++++
Sbjct: 255 EGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 314

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I  LC  G I +A   L  M+EK + P+ + ++ +I    + G L  A  I D M+
Sbjct: 315 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 374

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           S G   ++  +N ++ A  + G+   A  +  ++   G  P+V +YN +I A  + G   
Sbjct: 375 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 434

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            AL +   M+ +G+ PD ITY  LI   C  G ++EA  +   ++  G     I + I+
Sbjct: 435 RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIV 493



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 200/414 (48%), Gaps = 3/414 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   + AVI   C   +I  A  +  +M  +G +PD++T+N ++  LC    L  A  
Sbjct: 134 EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALK 193

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+ ++      P   TY   I        +++A+ L   M   G+ P+  T+N ++  +C
Sbjct: 194 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 253

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G++  A + +  + +        DVI+  IL+ ++   G   +   L  +MF +  + 
Sbjct: 254 KEGMVERAAELITSLTSKG---CKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEP 310

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           + V Y++LI+  C  G I  A +    M+++   PD  +Y+ L++ LCK+G+LD A    
Sbjct: 311 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 370

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G  PD ++Y TI+  LC +G+  +A E    +      P    +N +I     C
Sbjct: 371 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSC 430

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           GD S A  +   M+S GV  +  T+N+LI    R G + +A  L  +M   G  P V +Y
Sbjct: 431 GDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISY 490

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           N+++   C +  I  A+ ++ EM+ +G  P+  TY  LI+G    G   EA E+
Sbjct: 491 NIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 544



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 160/320 (50%), Gaps = 9/320 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   + A+IR +C  G +  A  L   +  KG  PDV+++N L+      G  ++ +
Sbjct: 238 LLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGE 297

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM      PN  TY+  I+  CR   +D+A+ +   M    + P+  +++ L+ AL
Sbjct: 298 KLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISAL 357

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G L  A+  +  ++++       D++    ++ +  KNG+  QAL ++N +      
Sbjct: 358 CKEGRLDLAIGIMDYMISNG---CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCP 414

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++ +YN +I+     GD S A      M+ +G  PD ITYN+L++CLC+ G ++EA   
Sbjct: 415 PNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGL 474

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + ++G  P  ISY  ++ GLC    I  A      M+EK   P    + ++I+G G 
Sbjct: 475 LDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGF 534

Query: 414 CG------DLSNAFSIRDLM 427
            G      +L+N+   RD++
Sbjct: 535 AGWRTEAMELANSLFSRDVI 554



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 165/350 (47%), Gaps = 40/350 (11%)

Query: 223 RVTHNI-LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           R TH + L++  CK G   +++ FL E L +     T DVI  T L+  +F N    +  
Sbjct: 67  RETHLMKLLNRSCKAGKFNESLYFL-ECLVNKG--YTPDVILCTKLIKGFF-NFKNIEKA 122

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
           +   ++ + + + D+ AYN +I+GFC    I +A     +M  RGFLPD++TYN ++  L
Sbjct: 123 SRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSL 182

Query: 342 CK-----------------------------------QGKLDEASHFYGVLSKTGVAPDQ 366
           C                                    +G ++EA      +   G+ PD 
Sbjct: 183 CNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDM 242

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
            +Y  II+G+C  G + +A E + S+  K   P+   +N+++  +   G       +   
Sbjct: 243 YTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAE 302

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M S G   N  T++ LI +  R G I +A S+ K M+   + PD ++Y+ LI A C  G 
Sbjct: 303 MFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGR 362

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           + LA+ + D M+  G  PDI+ Y  ++   C  GN  +A E+F K++ +G
Sbjct: 363 LDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 412



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 138/269 (51%), Gaps = 3/269 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK      L  +M  +G  P+ +T++ L++ LC+ G +++A  V++ M E   +P+  +Y
Sbjct: 291 GKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSY 350

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  I+  C+   LD A+ +   M +NG  P+ V +N ++ ALCK G    A++   ++  
Sbjct: 351 DPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRG 410

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   +V +   ++ + +  GD+ +AL +   M  K +  D + YN LI+  C +G 
Sbjct: 411 MG---CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGL 467

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A      M + GF P VI+YN +L  LCK  ++D+A   +  + + G  P++ +Y  
Sbjct: 468 VEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYIL 527

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           +I+G+   G   +A E   S+  + V+ +
Sbjct: 528 LIEGIGFAGWRTEAMELANSLFSRDVISQ 556


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 226/439 (51%), Gaps = 3/439 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I  +  +  K+++KG  PD +T   L+  LC  G++ KA +   ++       +  +Y
Sbjct: 107 GHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSY 166

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I G CRV E   A+ L   +    +RPN V ++ ++ ++CK  L+ DA     E+++
Sbjct: 167 GTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVS 226

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
               + + DV+T + L+  +   G    A+ L+N M   NI  ++  +++LI+GFC  G 
Sbjct: 227 K---RISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A      M+K+    DV+TYN+L++  C   ++++A   + V+++ GV PD  SY  
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSI 343

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G C    + +A +    M  K + P    +N ++DG  + G  S A  + D M   G
Sbjct: 344 MINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRG 403

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
             SN+ T+N+++ A  +   +  A  L  ++   GI PD+FTY +LI   C +G +  A 
Sbjct: 404 QPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQ 463

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           ++++++L +G +P+I TYT LI G C +G   E   + +K++  G   + I + IL    
Sbjct: 464 KVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSL 523

Query: 552 RRMKESDKARDIHQKWLLR 570
               E+DKA  + ++ + R
Sbjct: 524 FEKDENDKAEKLLREMIAR 542



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 205/414 (49%), Gaps = 38/414 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR------ 177
           +I+ LCL G++  AL+   K++ +G   D +++  L+N LC++G+ + A  ++R      
Sbjct: 134 LIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKL 193

Query: 178 -----------------------------EMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
                                        EM   R SP+  TY++ I+G+C V +L  A+
Sbjct: 194 VRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAV 253

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
            LF+ M ++ I PN  T +IL+   CK+G + +A   L  ++  +      DV+T   LM
Sbjct: 254 DLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKN---VKLDVVTYNSLM 310

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           D Y       +A +L+N M Q+ +  D+ +Y+++INGFC    +  A   F +M  +   
Sbjct: 311 DGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIF 370

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+V+TYN+L++ LCK G+   A      +   G   + I+Y +I+  +C +  + KA   
Sbjct: 371 PNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVL 430

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  + EK + P+   + V+I+G  + G L +A  + + +L  G S N++T+ +LI     
Sbjct: 431 LTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCN 490

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
            G   +  ++  +M  +G  P+  TY +LI +         A +L  EM+ RG+
Sbjct: 491 KGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 154/295 (52%), Gaps = 3/295 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   + ++I   C+ GK+  A+ L  +MI     P+V T + L++  CK G + +A 
Sbjct: 229 ISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAK 288

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           +V+  M +     +  TYN+ + GYC V +++KA  LF+ MA  G+ P+  +++I+++  
Sbjct: 289 NVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGF 348

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK  ++ +A+K   E+      +   +V+T   L+D   K+G    AL L ++M  +   
Sbjct: 349 CKIKMVDEAMKLFEEMHCK---QIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQP 405

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
           ++I+ YN +++  C N  +  A     ++ ++G  PD+ TY  L+N LCK G+LD+A   
Sbjct: 406 SNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKV 465

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           +  L   G +P+  +Y ++I G C  G   +    L  M +   +P    + ++I
Sbjct: 466 FEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILI 520



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 143/275 (52%), Gaps = 3/275 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  GK+  A  +   M++K    DV+T+N L++  C +  + KA  +   M++  
Sbjct: 274 LIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRG 333

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  +Y+  I G+C++  +D+A+ LF  M    I PN VT+N LV  LCK G    A+
Sbjct: 334 VTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCAL 393

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + + E+    D    S++IT   ++D+  KN    +A+ L   + +K IQ DI  Y VLI
Sbjct: 394 ELVDEM---HDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLI 450

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C  G +  A   F  +L +G+ P++ TY +L+N  C +G  DE       +   G  
Sbjct: 451 NGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCI 510

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           P+ I+Y+ +I  L    +  KA + L  M+ + ++
Sbjct: 511 PNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 162/309 (52%), Gaps = 4/309 (1%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           ++ S  K      AL+L   M    I+ D +  N+L+N F   G I  +F+ F ++LK+G
Sbjct: 64  ILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKG 123

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           + PD +T+  L+  LC +G++ +A +F+  +   G   DQ+SY T+I GLC  G+   A 
Sbjct: 124 YHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAV 183

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + L  +  K V P   +++ IID   +   +++AF +   M+S  +S +V T+++LI   
Sbjct: 184 QLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGF 243

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G +  A  L   M+ D I P+V+T+++LI   C  G +  A  +   M+++ +  D+
Sbjct: 244 CVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDV 303

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RD 562
           +TY  L+ G+C    + +A+ +F  +   G+  D   + I+   + ++K  D+A     +
Sbjct: 304 VTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEE 363

Query: 563 IHQKWLLRN 571
           +H K +  N
Sbjct: 364 MHCKQIFPN 372



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 162/357 (45%), Gaps = 38/357 (10%)

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           R + +  P P    +   +    +  +   AL L   M  NGI+P               
Sbjct: 47  RLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKP--------------- 91

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
                                  D IT  +LM+ + + G    + +++  + +K    D 
Sbjct: 92  -----------------------DFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDA 128

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V + +LI G CL G++  A  +  +++ +GF  D ++Y TL+N LC+ G+   A      
Sbjct: 129 VTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRR 188

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +    V P+ + Y TII  +C    +  A +    M+ K + P+   ++ +I G+   G 
Sbjct: 189 VDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGK 248

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L  A  + + M+S  ++ NV+TF+ LI    + G + +A ++   M+   +  DV TYN 
Sbjct: 249 LKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNS 308

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           L+   C +  ++ A  L++ M +RG+TPD+ +Y+ +I G C    + EA ++F ++ 
Sbjct: 309 LMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMH 365



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 72/129 (55%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  +C    +  A+ L  K+ +KG  PD+ T+  L+N LCK+G L+ A  V  ++   
Sbjct: 413 SILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVK 472

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SPN  TY + I G+C     D+ L + S M +NG  PN +T+ IL+H+L +K     A
Sbjct: 473 GYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKA 532

Query: 243 VKFLGEVLA 251
            K L E++A
Sbjct: 533 EKLLREMIA 541



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 13/149 (8%)

Query: 79  NEGNPQAVF---NALDLILKEN-LDR----LKTMRDTGPVRCTLETDYRRHVAVIRDLCL 130
           + G P  +    + LD I K N +D+    L  +++ G     ++ D   +  +I  LC 
Sbjct: 401 DRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKG-----IQPDIFTYTVLINGLCK 455

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G++  A  +   ++ KG  P++ T+  L+N  C  G  ++   ++ +M +    PN  T
Sbjct: 456 VGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAIT 515

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGI 219
           Y   I      +E DKA  L   M   G+
Sbjct: 516 YEILIHSLFEKDENDKAEKLLREMIARGL 544


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/472 (29%), Positives = 238/472 (50%), Gaps = 15/472 (3%)

Query: 77  SDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGT 136
           S     P ++ N  D +     +R+  MR T P+       + +   ++          T
Sbjct: 28  SHFHSQPPSIQNVDDAV--SQFNRMLCMRHTPPI-----IQFNK---ILDSFAKMKHYST 77

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L  ++  KG  PD++T N L+N  C +G +     V+ ++ +    P+  T N  I 
Sbjct: 78  AVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIK 137

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C   ++ KALH    +   G + N+V++  L++ +CK G    A+KFL ++    DG+
Sbjct: 138 GLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKI----DGR 193

Query: 257 ATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
            T  DV+    ++D+  K     +A  L+++M  K I  D+V YN LI GFC+ G +  A
Sbjct: 194 LTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEA 253

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                +M+ +   P+V TYN L++ LCK+GK+ EA     V+ K  V PD I+Y T++ G
Sbjct: 254 IGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
             +  ++ KA+    +M    V P+ H + ++I+G+ +   +  A ++   M    +   
Sbjct: 314 YFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           + T+++LI    + G I   + L  EM   G   DV TY+ LI   C  GH+  A+ L++
Sbjct: 374 IVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFN 433

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +M  + I P+I T+T L+ G C  G +K+A+EVF  + T G  ++   + ++
Sbjct: 434 KMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVM 485



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 224/447 (50%), Gaps = 3/447 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G+I     +  K++++G  PD +T N L+  LC  G ++KA H   ++    
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  +Y   I G C++ +   A+     +     +P+ V +N ++ A+CK  L+ +A 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+        ++DV+T   L+  +   G   +A+ L N+M  K I  ++  YN+L+
Sbjct: 220 GLFSEMAVKG---ISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G +  A +    MLK    PDVITY+TL++      ++ +A H +  +S  GV 
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y  +I G C +  + +A      M +K++VP    ++ +IDG  + G +S  + +
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDL 396

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M   G  ++V T+++LI    + G +  A +L  +M    I P++FT+ +L+   C 
Sbjct: 397 IDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCK 456

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A +++ ++L +G   ++ TY  +I GHC +G ++EA  + +K++  G   +   
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFT 516

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           F  +     +  E+DKA  + ++ + R
Sbjct: 517 FETIIIALFKKDENDKAEKLLRQMIAR 543



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 209/415 (50%), Gaps = 3/415 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I+ LCL G++  AL    K++ +G   + +++  L+N +CKIGD   A   +R++   
Sbjct: 134 TLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGR 193

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   YN  I   C+   + +A  LFS MA  GI  + VT+N L++  C  G L +A
Sbjct: 194 LTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEA 253

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  L E++         +V T  IL+D+  K G   +A ++   M +  ++ D++ Y+ L
Sbjct: 254 IGLLNEMVLK---TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTL 310

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+ L  ++  A   F  M   G  PDV TY  L+N  CK   +DEA + +  + +  +
Sbjct: 311 MDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNM 370

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  ++Y ++I GLC  G I    + +  M ++    +   ++ +IDG  + G L  A +
Sbjct: 371 VPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIA 430

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M    +  N+FTF  L+    +GG + DA  + +++L  G   +V+TYN++I   C
Sbjct: 431 LFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 490

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
             G +  AL +  +M   G  P+  T+  +I     +    +AE++  ++   GL
Sbjct: 491 KQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 175/315 (55%), Gaps = 4/315 (1%)

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           + T  +I    ++DS+ K      A++L + +  K IQ D++  N+LIN FC  G I+  
Sbjct: 54  RHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFG 113

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           F+   ++LKRG+ PD +T NTL+  LC +G++ +A HF+  L   G   +Q+SY T+I G
Sbjct: 114 FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLING 173

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           +C  GD   A +FL  +  +   P+  ++N IID   +   +S A+ +   M   G+S++
Sbjct: 174 VCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISAD 233

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           V T+N LI      G + +A  L  EM+L  I P+V+TYN+L+ A C  G +  A  +  
Sbjct: 234 VVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLA 293

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
            ML+  + PD+ITY+ L+ G+     +K+A+ VF  +  +G+  D   + IL   + + K
Sbjct: 294 VMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNK 353

Query: 556 ESDKA----RDIHQK 566
             D+A    +++HQK
Sbjct: 354 MVDEALNLFKEMHQK 368



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 160/305 (52%), Gaps = 8/305 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           LKE +  L  M     V  T+  +   +  ++  LC  GK+  A  +   M++    PDV
Sbjct: 250 LKEAIGLLNEM-----VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDV 304

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T++ L++    + +++KA HV   MS M  +P+  TY   I G+C+   +D+AL+LF  
Sbjct: 305 ITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKE 364

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M    + P  VT++ L+  LCK G +      + E+   D G+  +DVIT + L+D   K
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM--RDRGQP-ADVITYSSLIDGLCK 421

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           NG   +A+AL+N M  + I+ +I  + +L++G C  G +  A   F  +L +G+  +V T
Sbjct: 422 NGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYT 481

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN ++N  CKQG L+EA      +   G  P+  +++TII  L    +  KA + L  M+
Sbjct: 482 YNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMI 541

Query: 394 EKSVV 398
            + ++
Sbjct: 542 ARGLL 546



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 46/115 (40%)

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           DA S    ML     P +  +N ++ +   + H   A+ L   +  +GI PD+IT   LI
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
              C  G +     V AKI   G   D +    L K      +  KA   H K L
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 217/441 (49%), Gaps = 5/441 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           IR LC GG++  A+ L   M      PDV+T+N L+  LCK   +++A   +R M     
Sbjct: 157 IRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGC 215

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+  TYN  I GYC+ + L +A  L       G  P+RVT+  L++ LC +G +  A++
Sbjct: 216 IPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALE 275

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              E  A D      D++    L+    + G    AL + N+M +     DI  YN++IN
Sbjct: 276 LFNEAQAKD---LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVIN 332

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G+IS A       + +G+LPDV T+NT+++  CK+ KLD A      +   G+AP
Sbjct: 333 GLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAP 392

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D I+Y +++ GLC  G   +  E    M+ K   P    +N++I+ + +   L  A  + 
Sbjct: 393 DAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI 452

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
             M   G+  +  +FN LI    R G +  A+ L +++   G      T+N+LIGA  + 
Sbjct: 453 VRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSK 512

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            ++ +A +++ EM+ +G  PD+ TY  L+ G C   N+  A    A++ + G       F
Sbjct: 513 LNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATF 572

Query: 545 -RILKKRYRRMKESDKARDIH 564
            R+L       + S+    IH
Sbjct: 573 GRVLNSLAMNHRVSEAVAIIH 593



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 203/421 (48%), Gaps = 4/421 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+  G  PD  TH   +   C  G    A  ++R + E         Y   + G     
Sbjct: 35  RMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHG 94

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
               A HLF  M    + P+  T N ++HALC+KG + ++   L +VL       + +  
Sbjct: 95  HGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRG---MSVNKF 151

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T  I +    + G   +A+AL   M    I  D+V YN L+ G C +  +  A  Y  +M
Sbjct: 152 TCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRM 210

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           + +G +PD  TYNT+++  CK+  L EA+         G  PD+++Y ++I GLC  GD+
Sbjct: 211 MNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDV 270

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A E       K + P+  ++N ++ G  R G + +A  + + M+  G   +++T+N +
Sbjct: 271 ERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIV 330

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    + G+I DA  +  + ++ G  PDVFT+N +I   C    +  ALQL + M   GI
Sbjct: 331 INGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGI 390

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            PD ITY  ++ G C  G  KE  E F ++   G   + I + IL + + ++ + ++A  
Sbjct: 391 APDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASG 450

Query: 563 I 563
           +
Sbjct: 451 V 451



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 213/450 (47%), Gaps = 4/450 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D R H   I+  C+ G+   AL L R + ++G     L +  +V  L   G    A H+ 
Sbjct: 44  DARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLF 103

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P+ AT+N  +   C+  ++ ++  L + +   G+  N+ T NI +  LC+ 
Sbjct: 104 DEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEG 163

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L +AV  +  +    D     DV+T   LM    K+    +A      M  +    D 
Sbjct: 164 GRLEEAVALVESM----DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDD 219

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             YN +I+G+C    +  A       + +GF+PD +TY +L+N LC +G ++ A   +  
Sbjct: 220 FTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNE 279

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
                + PD + Y ++++GLC  G I+ A + +  M+E    P+   +N++I+G  + G+
Sbjct: 280 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGN 339

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +S+A  + +  +  G   +VFTFN +I    +   +  A  L + M + GI PD  TYN 
Sbjct: 340 ISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNS 399

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           ++   C  G      + ++EM+ +G  P+ ITY  LI+  C    ++EA  V  ++   G
Sbjct: 400 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDG 459

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           L  D I F  L   + R  + D A  + QK
Sbjct: 460 LVPDTISFNTLIHGFCRNGDLDGAYLLFQK 489



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 213/424 (50%), Gaps = 3/424 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   +  ++R LC   K+  A    R+M+ +G +PD  T+N +++  CK   L++A 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++++       P+  TY + I G C   ++++AL LF+      ++P+ V +N LV  L
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C++GL+  A++ + E++ D       D+ T  I+++   K G+   A  + ND   K   
Sbjct: 300 CRQGLILHALQVMNEMVEDG---CHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYL 356

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+  +N +I+G+C    + SA     +M   G  PD ITYN++LN LCK GK  E +  
Sbjct: 357 PDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNET 416

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  +   G  P+ I+Y  +I+  C    + +A   ++ M +  +VP+   +N +I G+ R
Sbjct: 417 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCR 476

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            GDL  A+ +   +   G S+   TFN LI A +   ++  A  +  EM+  G  PD++T
Sbjct: 477 NGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYT 536

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y +L+  SC   ++  A     EM+ +G  P + T+  ++        + EA  +   + 
Sbjct: 537 YRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMV 596

Query: 534 TLGL 537
            +G+
Sbjct: 597 RMGV 600



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 208/449 (46%), Gaps = 14/449 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C    +  A  L +  I KG VPD +T+  L+N LC  GD+E+A  +  E     
Sbjct: 225 IIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD 284

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   YN+ + G CR   +  AL + + M  +G  P+  T+NI+++ LCK G + DA 
Sbjct: 285 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAA 344

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             + + +         DV T   ++D Y K      AL L   M+   I  D + YN ++
Sbjct: 345 VVMNDAIVKG---YLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVL 401

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C  G        F +M+ +G  P+ ITYN L+   CK  +L+EAS     +S+ G+ 
Sbjct: 402 NGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLV 461

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD IS+ T+I G C +GD+  A      + EK        +N++I  Y    ++  A  I
Sbjct: 462 PDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 521

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+S G   +++T+  L+    +  ++  A+    EM+  G  P + T+  ++ +   
Sbjct: 522 FGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAM 581

Query: 484 LGHIHLALQLYDEMLRRGITPDII-TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
              +  A+ +   M+R G+ P+++ T     K   A   +   EE+  K       I + 
Sbjct: 582 NHRVSEAVAIIHIMVRMGVVPEVVDTILSTDKKEIAAPKIL-VEELMKKGH-----ISYP 635

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLRN 571
            + +L +  R  K + KAR    KW L +
Sbjct: 636 TYEVLHEGVRDNKLTRKAR----KWRLSD 660



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 163/323 (50%), Gaps = 3/323 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   + ++++ LC  G I  AL +  +M++ G  PD+ T+N ++N LCK+G++  A 
Sbjct: 285 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAA 344

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V+ +       P+  T+N  I GYC+  +LD AL L   M   GI P+ +T+N +++ L
Sbjct: 345 VVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGL 404

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G   +  +   E++         + IT  IL++++ K     +A  +   M Q  + 
Sbjct: 405 CKAGKAKEVNETFEEMILKG---CRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLV 461

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D +++N LI+GFC NGD+  A+  F ++ ++G+     T+N L+     +  +  A   
Sbjct: 462 PDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 521

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +G +   G  PD  +Y+ ++ G C   ++ +A   L  M+ K  VP    +  +++    
Sbjct: 522 FGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAM 581

Query: 414 CGDLSNAFSIRDLMLSFGVSSNV 436
              +S A +I  +M+  GV   V
Sbjct: 582 NHRVSEAVAIIHIMVRMGVVPEV 604



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 35/146 (23%)

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
           FG       +NA++ A         A  +   ML  G+ PD  T+ + I + C  G  H+
Sbjct: 4   FGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHV 63

Query: 490 ALQ-----------------------------------LYDEMLRRGITPDIITYTELIK 514
           AL+                                   L+DEMLRR + PD+ T+  ++ 
Sbjct: 64  ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLH 123

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAID 540
             C +G++ E+  + AK+   G++++
Sbjct: 124 ALCQKGDIMESGALLAKVLKRGMSVN 149


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 206/435 (47%), Gaps = 3/435 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++   L   + ++Q G   D++T N ++  +    D+  AD     +  + P PN  T+
Sbjct: 251 GEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTF 310

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  I  YC+   LDKA  LF  MA NG+ P+ + ++IL+  L K G L D  + L  ++A
Sbjct: 311 STLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLL--LVA 368

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            D G    DV+  +  MD+Y K GD  + + ++  M  + I  ++V+ ++LI GFC NG 
Sbjct: 369 LDKG-IKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGR 427

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I  A   F Q+LK GF P ++TY+ L+   CK G L +  + Y  + K    PD I Y  
Sbjct: 428 ILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSV 487

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC  G +  A  F    + + + P     N ++D + R   +  A  +  LM    
Sbjct: 488 LINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLN 547

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           + ++  T+  LI    + G + +A  L  +ML     PDV TY  LI   C L      L
Sbjct: 548 IKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGL 607

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            ++D M +  + PDI  Y  LI  H   G+++ A  +F  +   G   D   F  +   Y
Sbjct: 608 CIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCY 667

Query: 552 RRMKESDKARDIHQK 566
              K  D A  +  K
Sbjct: 668 CNFKRLDDAVQLFAK 682



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 223/439 (50%), Gaps = 4/439 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +G  + + ++M+ +G  P+V++ + L+   C+ G + +A  +  ++ ++   P+  TY
Sbjct: 391 GDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTY 450

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +A I G+C+   L    +L+  M      P+ + +++L++ LCK+GL+GDA++F  + + 
Sbjct: 451 SALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAV- 509

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +   + +V T   L+DS+ +      A+ ++  M   NI+ D V Y +LI G    G 
Sbjct: 510 --NRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGR 567

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F QMLK+ F PDVITY TL++ LCK  K       +  + K  VAPD   Y  
Sbjct: 568 VDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNV 627

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I      G +  A    + ++E+   P+   +N +I  Y     L +A  +   M S  
Sbjct: 628 LINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQ 687

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI-GASCNLGHIHLA 490
           +  N  TF  LI A  R G + DA  +  +ML +G  P++ TY+ LI G   +   +   
Sbjct: 688 LRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESG 747

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L+LY+EML   I P+I++Y+ LI G C RG MKEA   F       L  D I + IL + 
Sbjct: 748 LKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRG 807

Query: 551 YRRMKESDKARDIHQKWLL 569
           Y ++    +A  ++   LL
Sbjct: 808 YCKVGRLTEAMMLYDNMLL 826



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 208/438 (47%), Gaps = 6/438 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G +  A  L   M   G  PD++ ++ L++ L K G LE    ++    + 
Sbjct: 312 TLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDK 371

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +   +++ +  Y ++ +L + + ++  M N GI PN V+ +IL+   C+ G + +A
Sbjct: 372 GIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEA 431

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                ++L          ++T + L+  + K+G+      L+ DM +K  + D + Y+VL
Sbjct: 432 CGLFVQILKLG---FEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVL 488

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING C  G +  A  +F Q + RG  P+V T NTLL+  C+   +  A   Y ++    +
Sbjct: 489 INGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNI 548

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D ++Y  +I+G    G + +A      ML+K   P+   +  +IDG  +    S    
Sbjct: 549 KADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLC 608

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I D M    V+ ++  +N LI   +R G +  A  L   ++  G  PDVFT+N +I   C
Sbjct: 609 IFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYC 668

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           N   +  A+QL+ +M    + P+ IT+T LI   C  G M +A  +F+K+   G   + +
Sbjct: 669 NFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLV 728

Query: 543 PFRILKKRY---RRMKES 557
            +  L   Y   + M ES
Sbjct: 729 TYSCLIHGYFKSQSMMES 746



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 200/409 (48%), Gaps = 8/409 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+  C  G+I  A  L  ++++ G  P +LT++ L+   CK G+L    ++  +M + R
Sbjct: 418 LIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKR 477

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   Y+  I G C+   +  AL  F    N G+ PN  T N L+ + C+   +  A+
Sbjct: 478 CEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAM 537

Query: 244 K--FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           K  +L  +L        +D +T TIL+    + G   +AL L+  M +K+ + D++ Y  
Sbjct: 538 KVYYLMGML-----NIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCT 592

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LI+G C     S+    F  M K    PD+  YN L+N   ++G L+ A   +  + + G
Sbjct: 593 LIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERG 652

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             PD  ++ T+I   C    +  A +    M  + + P    + ++ID + R G + +A 
Sbjct: 653 PKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAM 712

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA-FSLKKEMLLDGIFPDVFTYNLLIGA 480
            +   ML  G   N+ T++ LI    +  S+ ++   L  EML + I P++ +Y++LI  
Sbjct: 713 LMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDG 772

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            C  G +  A   +   L + + PD+I YT LI+G+C  G + EA  ++
Sbjct: 773 LCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLY 821



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 189/395 (47%), Gaps = 8/395 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            E     + A+I   C  G +    +L   MI+K   PD + ++ L+N LCK G +  A 
Sbjct: 443 FEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDAL 502

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
               +      SPN  T N  +  +CR+  +  A+ ++  M    I+ + VT+ IL+   
Sbjct: 503 RFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGA 562

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            + G + +A+    ++L  D      DVIT   L+D   K       L +++ M +  + 
Sbjct: 563 AQFGRVDEALMLFFQMLKKD---FKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVA 619

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DI  YNVLIN     G + +A   F  +++RG  PDV T+NT++ C C   +LD+A   
Sbjct: 620 PDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQL 679

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGY 411
           +  ++   + P+ I++  +I   C  G +  A      MLE+   PEP++  ++ +I GY
Sbjct: 680 FAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEG--PEPNLVTYSCLIHGY 737

Query: 412 GRCGD-LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            +    + +   + + ML   ++ N+ +++ LI    + G + +A    +  L   + PD
Sbjct: 738 FKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPD 797

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
           V  Y +LI   C +G +  A+ LYD ML   +TPD
Sbjct: 798 VIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 175/369 (47%), Gaps = 7/369 (1%)

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGI--RPNRVTHNILVHALCKKGLLGDAVKFL 246
             Y   I  YCR    DK++ +F  +   GI   PN V   +L+ +L     +   V   
Sbjct: 168 VVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVY--LLLGSLIDSHCVEVIVDKY 225

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
           GE+ +    +  S       +M+ +   G+    L     + Q     DI+  N ++ G 
Sbjct: 226 GELCSAMREQPFS---VYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGI 282

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
            +  DI  A  YF  +++ G  P+V+T++TL++  CK+G LD+A   + V++  GV PD 
Sbjct: 283 WMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDL 342

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           I Y  +I GL   G +   +  LL  L+K +  +   ++  +D Y + GDL     I   
Sbjct: 343 IVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKR 402

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           ML+ G+S NV + + LI    + G I +A  L  ++L  G  P + TY+ LI   C  G+
Sbjct: 403 MLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGN 462

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +     LY++M+++   PD I Y+ LI G C +G + +A   F +    GL+ +      
Sbjct: 463 LRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNT 522

Query: 547 LKKRYRRMK 555
           L   + R+K
Sbjct: 523 LLDSFCRLK 531



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 132/260 (50%), Gaps = 4/260 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            + D   +  +I  LC   K    L +   M +    PD+  +N L+N   + G LE A 
Sbjct: 583 FKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAAL 642

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   + E  P P+  T+N  I  YC    LD A+ LF+ M +  +RPN +T  IL+ A 
Sbjct: 643 GLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAF 702

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA-LALWNDMFQKNI 292
           C++G + DA+    ++L +       +++T + L+  YFK+    ++ L L+N+M + NI
Sbjct: 703 CREGRMDDAMLMFSKMLEEG---PEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNI 759

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             +IV+Y++LI+G C  G +  A   F   L +  LPDVI Y  L+   CK G+L EA  
Sbjct: 760 APNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMM 819

Query: 353 FYGVLSKTGVAPDQISYKTI 372
            Y  +    + PD+   +T+
Sbjct: 820 LYDNMLLNRLTPDRFLERTL 839



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/244 (20%), Positives = 109/244 (44%), Gaps = 14/244 (5%)

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTG--VAPDQISY--KTIIQGLCIHGDIVKARE 387
           + Y  L+   C++G  D++   +  +   G  V+P+ +     ++I   C+   + K  E
Sbjct: 168 VVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGE 227

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL---IL 444
              +M E+       ++  +++ +   G++         ++  G   ++ T N +   I 
Sbjct: 228 LCSAMREQPF----SVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIW 283

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
            +   G   D F++   +   G  P+V T++ LI A C  G++  A  L+D M   G+TP
Sbjct: 284 MQNDIGVADDYFNMVVRI---GPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTP 340

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
           D+I Y+ LI G    G +++ + +       G+ +D + F      Y ++ +  +   I+
Sbjct: 341 DLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIY 400

Query: 565 QKWL 568
           ++ L
Sbjct: 401 KRML 404



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           + L L  +M++    P++++++ L++ LCK G +++A    R   +    P+   Y   I
Sbjct: 746 SGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILI 805

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
            GYC+V  L +A+ L+  M  N + P+R     L     KK 
Sbjct: 806 RGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTLEEYQLKKA 847


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 223/433 (51%), Gaps = 3/433 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
             +L  +M   G  PD  T N L+N LC +  + +   V+  +      P+  TY   I 
Sbjct: 115 VFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIK 174

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C  + + KA  LF+ M   G  PN +T+  L+  LC+ G +  A+K   E+L D    
Sbjct: 175 GLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLY 234

Query: 257 ATS---DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
             +    VI+ +I++D+  K+  + +A  L+ +M  + +   +++Y  LI+GFC  G   
Sbjct: 235 GINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWE 294

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A   F +M+ +G  P+V+T+N L++ LCK+GK+ EA     V+ + G+ P+ ++Y ++I
Sbjct: 295 EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 354

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
           +G C+ GD+  ARE  +SM  K   P+   + V+I+GY +   +  A  + + ML  G  
Sbjct: 355 EGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR 414

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            +V T+ AL+    +GG + DA  L   M + GI  D++ Y + +   C  G +  A++L
Sbjct: 415 PDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMEL 474

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           ++++    I  DI  +  LI G C  G ++ A E+F K+    L  D + + I+   + R
Sbjct: 475 FNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCR 534

Query: 554 MKESDKARDIHQK 566
             +  KA  + QK
Sbjct: 535 GGQVVKANILFQK 547



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 212/430 (49%), Gaps = 9/430 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I+ LC+  +I  A  L  +M + G  P+ +T+  L+  LC+ G++  A  + 
Sbjct: 165 DIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLH 224

Query: 177 REMSE------MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +EM        +   P   +Y+  I   C+    D+A  LF  M   G+ P  +++  L+
Sbjct: 225 QEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLI 284

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           H  C  G   +A +   E++   +     +V+T  +L+D   K G   +A  L   M Q+
Sbjct: 285 HGFCCGGKWEEAKRLFNEMV---NQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQR 341

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            I  +++ YN LI GFCL GD++SA   F  M  +G  PDVI Y  L+N  CK  K++EA
Sbjct: 342 GIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEA 401

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              Y  + + G  PD  +Y  ++ GL   G +  A++    M    +  + +I+ + ++G
Sbjct: 402 MKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNG 461

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             + G L  A  + + + S+ +  ++  FN LI    + G +  A+ L +++  + + PD
Sbjct: 462 LCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPD 521

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V TYN++I   C  G +  A  L+ +M + G TPD ITY  LI+G      +++  E+  
Sbjct: 522 VVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLH 581

Query: 531 KIQTLGLAID 540
            +    +++D
Sbjct: 582 MMVQRDVSLD 591



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 228/476 (47%), Gaps = 18/476 (3%)

Query: 104 MRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           MR +G  P  CTL         ++  LC   ++G  L +   ++++G +PD++T+  L+ 
Sbjct: 122 MRLSGISPDCCTLNI-------LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIK 174

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG--- 218
            LC    + KA  +   M ++  +PN  TY   + G CR   +  AL L   M N+    
Sbjct: 175 GLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLY 234

Query: 219 ---IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
               +P  ++++I++ ALCK     +A     E+        T  VI+ T L+  +   G
Sbjct: 235 GINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQG---MTPTVISYTSLIHGFCCGG 291

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
              +A  L+N+M  + +Q ++V +NVLI+  C  G +  A      M++RG +P+++TYN
Sbjct: 292 KWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYN 351

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           +L+   C  G L+ A   +  +   G  PD I Y  +I G C    + +A +    ML+ 
Sbjct: 352 SLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQV 411

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
              P+   +  ++ G  + G + +A  +  +M  +G+  +++ +   +    + G +F+A
Sbjct: 412 GKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEA 471

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             L  ++    I  D+  +N LI   C  G +  A +L++++ +  + PD++TY  +I  
Sbjct: 472 MELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHE 531

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            C  G + +A  +F K++  G   D I +  L + +   K+ +K  ++    + R+
Sbjct: 532 FCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRD 587



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 197/390 (50%), Gaps = 9/390 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTV------PDVLTHNYLVNELCKIGDLEKADHVI 176
            +++ LC  G I  AL L ++M+   ++      P V++++ +++ LCK    ++A  + 
Sbjct: 206 TLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLF 265

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM     +P   +Y + I G+C   + ++A  LF+ M N G++PN VT N+L+  LCK+
Sbjct: 266 EEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKE 325

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A K L EV+         +++T   L++ +   GD   A  L+  M  K  + D+
Sbjct: 326 GKVIEA-KDLLEVMIQRG--IVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDV 382

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + Y VLING+C    +  A   +  ML+ G  PDV TY  LL  L + GK+ +A   +GV
Sbjct: 383 ICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGV 442

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G+  D   Y   + GLC +G + +A E    +   ++  +   +N +IDG  + G 
Sbjct: 443 MKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGK 502

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L  A+ + + +    +  +V T+N +I    RGG +  A  L ++M  +G  PD  TY  
Sbjct: 503 LETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYAT 562

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDI 506
           LI        +   ++L   M++R ++ D+
Sbjct: 563 LIRGFFESKKLEKVVELLHMMVQRDVSLDV 592



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 151/296 (51%), Gaps = 6/296 (2%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           Q   L+N M    I  D    N+L+N  C    +    A    +L+RG++PD++TY TL+
Sbjct: 114 QVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLI 173

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             LC + ++ +A+  +  + K G  P+ I+Y T+++GLC  G+I  A +    ML  S +
Sbjct: 174 KGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSL 233

Query: 399 ------PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
                 P    +++IID   +      A  + + M   G++  V ++ +LI     GG  
Sbjct: 234 YGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKW 293

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +A  L  EM+  G+ P+V T+N+LI   C  G +  A  L + M++RGI P+++TY  L
Sbjct: 294 EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSL 353

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           I+G C  G++  A E+F  + + G   D I + +L   Y +  + ++A  ++   L
Sbjct: 354 IEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGML 409



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 41/298 (13%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           QA   ++ M   N    + ++  L++G       S  F  + QM   G  PD  T N LL
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           NCLC   ++ E       + + G  PD ++Y T+I+GLC+   I KA   L + ++K   
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKA-ALLFTRMQK--- 194

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
                                           G + N  T+  L+    R G+I  A  L
Sbjct: 195 -------------------------------LGCTPNAITYGTLMKGLCRTGNISIALKL 223

Query: 459 KKEMLLDGIF------PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +EML D         P V +Y+++I A C       A  L++EM  +G+TP +I+YT L
Sbjct: 224 HQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSL 283

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           I G C  G  +EA+ +F ++   G+  + + F +L     +  +  +A+D+ +  + R
Sbjct: 284 IHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQR 341



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 72/151 (47%)

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
           + AF    LM+    +  + +F  L+    +       F L  +M L GI PD  T N+L
Sbjct: 78  TQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNIL 137

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           +   CN+  +   L +   +LRRG  PDI+TYT LIKG C    + +A  +F ++Q LG 
Sbjct: 138 LNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGC 197

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             + I +  L K   R      A  +HQ+ L
Sbjct: 198 TPNAITYGTLMKGLCRTGNISIALKLHQEML 228



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 119/296 (40%), Gaps = 51/296 (17%)

Query: 79  NEG-NPQAV-FNAL-DLILKENL-----DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCL 130
           N+G  P  V FN L D++ KE       D L+ M   G V   L  +     ++I   CL
Sbjct: 305 NQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYN-----SLIEGFCL 359

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G + +A  L   M  KG  PDV+ +  L+N  CK   +E+A  +   M ++   P+  T
Sbjct: 360 VGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 419

Query: 191 YNA-----------------------------------FITGYCRVNELDKALHLFSTMA 215
           Y A                                   F+ G C+   L +A+ LF+ + 
Sbjct: 420 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 479

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           +  I+ +    N L+  LCK G L  A +   ++  ++      DV+T  I++  + + G
Sbjct: 480 SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEE---LQPDVVTYNIMIHEFCRGG 536

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
              +A  L+  M +     D + Y  LI GF  +  +         M++R    DV
Sbjct: 537 QVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 226/462 (48%), Gaps = 18/462 (3%)

Query: 105 RDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC 164
           R+  P  CT  T       +I  LC    +  A  L  + +  G VPDV+T++ L + LC
Sbjct: 74  RNCRPSCCTYNT-------LISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLC 126

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           K G +++A  +++EMS    +PN  TYN  I G C+ ++ +KA  L  T+ ++G  P+ V
Sbjct: 127 KRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV 186

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           T+ I+V  LCK+G L  A+K +  +L       T  VIT T LM+   + G   +A  ++
Sbjct: 187 TYTIIVDGLCKEGRLDKALKMVEGMLKRG---CTPSVITYTALMEGLCRTGRVDEAHHIF 243

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF--LPDVITYNTLLNCLC 342
            +M  K+   D +AY  L+NG+C +     A     Q +  G    P +  YN L++  C
Sbjct: 244 KEMVSKDCTADALAYVSLVNGYCKSSRTKEA-----QKVVDGIRGTPYIDVYNALMDGYC 298

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K+G+LDE  + +  ++  G  P+  +Y  ++ GLC HG + +A  FL SM     VP+  
Sbjct: 299 KEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVV 358

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +N+IIDG  +      A  + D M+  G+  +  T+N L+    +     DA  + K M
Sbjct: 359 SYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNM 418

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG-ITPDIITYTELIKGHCARGN 521
           +  G+ PD  TYN LI        +  A +L  EMLR G +     TY  +I   C  G 
Sbjct: 419 IKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGC 478

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           +K+A  +   +   G+  + + + I   R  +    D+A  +
Sbjct: 479 LKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSL 520



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 208/424 (49%), Gaps = 6/424 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   K   A  +  +M+ +G  PD +T N +++ LCK G  E+A  ++  M+E  
Sbjct: 16  LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 75

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+C TYN  I+G C+   +D+A  L     ++G  P+ VT++IL   LCK+G + +A 
Sbjct: 76  CRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 135

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + + E+  +     T +++T   L+D   K     +A  L   +       D+V Y +++
Sbjct: 136 ELVKEMSGNG---CTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIV 192

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G +  A      MLKRG  P VITY  L+  LC+ G++DEA H +  +      
Sbjct: 193 DGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCT 252

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D ++Y +++ G C      +A++ +  +      P   ++N ++DGY + G L    ++
Sbjct: 253 ADALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDGYCKEGRLDEIPNV 309

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   G   N+ T+N ++    + G + +AF   + M   G  PDV +YN++I     
Sbjct: 310 FEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFK 369

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
                 A Q+ D+M++ GI PD +TY  L+   C      +A  +   +   G+  D++ 
Sbjct: 370 ASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVT 429

Query: 544 FRIL 547
           +  L
Sbjct: 430 YNTL 433



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 227/517 (43%), Gaps = 69/517 (13%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++  LC  G++  AL +   M+++G  P V+T+  L+  LC+ G +++A H+ 
Sbjct: 184 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 243

Query: 177 REMSE--------------------------------MRPSPNCATYNAFITGYCRVNEL 204
           +EM                                  +R +P    YNA + GYC+   L
Sbjct: 244 KEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRL 303

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D+  ++F  MA  G  PN  T+NI++  LCK G + +A  FL  + +        DV++ 
Sbjct: 304 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHS---AGCVPDVVSY 360

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
            I++D  FK     +A  + + M Q  I  D V YN L+  FC       A      M+K
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 420

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG-VAPDQISYKTIIQGLCIHGDIV 383
            G  PD +TYNTL++ L +  +L +A      + + G V     +Y TII  LC  G + 
Sbjct: 421 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLK 480

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-------------------- 423
           +A   +  M    V      +N+ ID   + G L  A S+                    
Sbjct: 481 QALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGL 540

Query: 424 -------------RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
                        R+++   G+     TFN LI A T+   + +A +L + M+  G  P 
Sbjct: 541 CKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPS 600

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V TYN++I   C L  +  A +L+DEM  RGI    ++YT LI G C +G  KEA +V  
Sbjct: 601 VITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLE 660

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           ++ +    ID +  R L    R     ++A ++ ++ 
Sbjct: 661 EMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 178/387 (45%), Gaps = 35/387 (9%)

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M    + P+  T+NIL+  LCK      A + L E++   D   T D +T   +MD   K
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMV---DRGVTPDTVTFNSIMDGLCK 57

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +A +L   M ++N +     YN LI+G C   ++  A     + +  GF+PDV+T
Sbjct: 58  AGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVT 117

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y+ L + LCK+G++DEA      +S  G  P+ ++Y T+I GLC      KA E L +++
Sbjct: 118 YSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLV 177

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
               VP+   + +I+DG  + G L  A  + + ML  G + +V T+ AL+    R G + 
Sbjct: 178 SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVD 237

Query: 454 DAFSLKKEM------------------------------LLDGI--FPDVFTYNLLIGAS 481
           +A  + KEM                              ++DGI   P +  YN L+   
Sbjct: 238 EAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGY 297

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C  G +     ++++M  RG  P+I TY  ++ G C  G + EA      + + G   D 
Sbjct: 298 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDV 357

Query: 542 IPFRILKKRYRRMKESDKARDIHQKWL 568
           + + I+     +  +  +AR +  + +
Sbjct: 358 VSYNIIIDGLFKASKPKEARQVLDQMI 384



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 129/305 (42%), Gaps = 35/305 (11%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C   +   A+ + + MI+ G  PD +T+N L++ L +   L  A  ++ EM  +R
Sbjct: 398 LMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEM--LR 455

Query: 184 PS---PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                  C TYN  I   C+   L +AL L   M  +G+  N VT+NI +  LCK+G L 
Sbjct: 456 NGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLD 515

Query: 241 DAVKFLGEVLADDDGKATSDVI------------------------------TSTILMDS 270
           +A   L E+    D  + + VI                              T  +L+D+
Sbjct: 516 EASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDA 575

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + K     +AL L   M Q+     ++ YN++I   C    +  A+  F +M  RG +  
Sbjct: 576 FTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVAS 635

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            ++Y  L+  LC QG+  EA      ++ +    D +  + +   L   G   +A E L 
Sbjct: 636 SVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLR 695

Query: 391 SMLEK 395
            M  K
Sbjct: 696 RMTTK 700


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 227/434 (52%), Gaps = 3/434 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A  +   M + G  P+ +T + L+N L     +  A  +  EM +M   P+  TY+  I 
Sbjct: 31  AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C++     A+ L   M   G +PN V ++ ++ +LCK  L+ +A++FL E++   +  
Sbjct: 91  GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMV---NRG 147

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
            + +V+T + ++  +   G   +A +L+  M ++N+  D V +N+L++G    G I  A 
Sbjct: 148 ISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQ 207

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F  M+++G  P+V TYN L++  C Q ++DEA   + ++ + G AP   SY  +I+G 
Sbjct: 208 CVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGH 267

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G I +A+  L  M  K++ P+   ++ ++ G+ + G   +A  + + M S+G+  ++
Sbjct: 268 CKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDL 327

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T++ ++    + G + +AF L K M    I P++F Y +LI   CN G +  A +L+  
Sbjct: 328 MTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSN 387

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           +  +GI PD++TYT +I G    G   EA E+F  +   G   +   + ++ + + R  +
Sbjct: 388 LFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGD 447

Query: 557 SDKARDIHQKWLLR 570
           +  A  + ++ + R
Sbjct: 448 TSNAGRLIEEMVGR 461



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 215/440 (48%), Gaps = 3/440 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ ++     ++  L    KI  A+ L  +M++ G  PDV+T++ ++N LCK+G    A 
Sbjct: 43  LQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAI 102

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++++M E    PN   Y+  I   C+   + +A+   S M N GI PN VT++ ++H  
Sbjct: 103 QLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGF 162

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C  G   +A     +++  +      D +T  IL+D   K G   +A  ++  M +K ++
Sbjct: 163 CNLGRSNEATSLFKQMVERN---VMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVE 219

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++  YN L++G+C    +  A   F  M+++G  P V +YN L+   CK G++DEA   
Sbjct: 220 PNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGL 279

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +S   + PD ++Y T+++G C  G    A++ L  M    ++P+   +++++DG  +
Sbjct: 280 LAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCK 339

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G L  AF +   M    +  N+F +  LI      G +  A  L   + + GI PDV T
Sbjct: 340 QGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVT 399

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y ++I      G  + A +L+ +M   G  P+  TY  +I+G    G+   A  +  ++ 
Sbjct: 400 YTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMV 459

Query: 534 TLGLAIDHIPFRILKKRYRR 553
             G + D   F++L     R
Sbjct: 460 GRGFSADSSTFQMLSDLESR 479



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 198/403 (49%), Gaps = 3/403 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V+   E D   +  +I  LC  G    A+ L +KM +KG  P+V+ ++ +++ LCK   +
Sbjct: 74  VKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLI 133

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A   + EM     SPN  TY++ + G+C +   ++A  LF  M    + P+ VT NIL
Sbjct: 134 TEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNIL 193

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           V  L K+G++ +A      ++   +     +V T   LMD Y       +A  L+N M +
Sbjct: 194 VDGLSKEGMILEAQCVFETMI---EKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVR 250

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K     + +YN+LI G C +G I  A     +M  +   PD +TY+TL+   C+ G+  +
Sbjct: 251 KGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQD 310

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A      +   G+ PD ++Y  ++ GLC  G + +A E L +M E  + P   I+ ++I 
Sbjct: 311 AQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQ 370

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G    G L  A  +   +   G+  +V T+  +I    +GG   +A  L ++M + G  P
Sbjct: 371 GMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLP 430

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
           +  TYN++I      G    A +L +EM+ RG + D  T+  L
Sbjct: 431 NSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 198/388 (51%), Gaps = 7/388 (1%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANN---GIRPNRVTHNILVHALCKKGLLGDA 242
           P+  T    I  +C  N  D     FS + N    G++PN VT + L++ L  K  + DA
Sbjct: 8   PDVYTLTILINCFCHSNH-DHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDA 66

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           VK   E++         DVIT + +++   K G    A+ L   M +K  + ++V Y+ +
Sbjct: 67  VKLFDEMVKMG---YEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTI 123

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+  C +  I+ A  +  +M+ RG  P+V+TY+++L+  C  G+ +EA+  +  + +  V
Sbjct: 124 IDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNV 183

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD +++  ++ GL   G I++A+    +M+EK V P  + +N ++DGY     +  A  
Sbjct: 184 MPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQK 243

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + ++M+  G + +V ++N LI    + G I +A  L  EM    + PD  TY+ L+   C
Sbjct: 244 LFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFC 303

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G    A +L +EM   G+ PD++TY+ ++ G C +G++ EA E+   +Q   +  +  
Sbjct: 304 QDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIF 363

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLR 570
            + IL +      + + AR++     ++
Sbjct: 364 IYTILIQGMCNFGKLEAARELFSNLFVK 391



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 176/358 (49%), Gaps = 8/358 (2%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D ++ E ++ L  M + G     +  +   + +++   C  G+   A  L ++M+++  +
Sbjct: 130 DKLITEAMEFLSEMVNRG-----ISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD +T N LV+ L K G + +A  V   M E    PN  TYNA + GYC  +++D+A  L
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F+ M   G  P+  ++NIL+   CK G + +A   L E+        T D +T + LM  
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEM---SHKALTPDTVTYSTLMKG 301

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + ++G    A  L  +M    +  D++ Y+++++G C  G +  AF     M +    P+
Sbjct: 302 FCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPN 361

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           +  Y  L+  +C  GKL+ A   +  L   G+ PD ++Y  +I GL   G   +A E   
Sbjct: 362 IFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFR 421

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
            M     +P    +NVII G+ R GD SNA  + + M+  G S++  TF  L   E+R
Sbjct: 422 DMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESR 479



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 77/152 (50%)

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AFS+   M   G+  N  TF+ L+   +    I DA  L  EM+  G  PDV TY+ +I 
Sbjct: 31  AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C +G   +A+QL  +M  +G  P+++ Y+ +I   C    + EA E  +++   G++ 
Sbjct: 91  GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP 150

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           + + +  +   +  +  S++A  + ++ + RN
Sbjct: 151 NVVTYSSILHGFCNLGRSNEATSLFKQMVERN 182



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 2/108 (1%)

Query: 462 MLLDGIFPDVFTYNLLIGASC--NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           M L  I PDV+T  +LI   C  N  H H A  +   M + G+ P+ +T++ L+ G  ++
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
             + +A ++F ++  +G   D I +  +     +M  +  A  + +K 
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM 108


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 218/438 (49%), Gaps = 6/438 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           +R L   G++         M+  G VPD++    L+   C++G   KA  ++  +     
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+  TYN  I+GYC+  E++ AL +   M+   + P+ VT+N ++ +LC  G L  A++
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L  +L  D      DVIT TIL+++  ++    QA+ L ++M  +    D+V YNVL+N
Sbjct: 226 VLDRMLQRD---CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G +  A  +   M   G  P+VIT+N +L  +C  G+  +A      + + G +P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
             +++  +I  LC  G + +A + L  M +    P    +N ++ G+ +   +  A    
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           + M+S G   ++ T+N ++ A  + G + DA  +  ++   G  P + TYN +I      
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G    A++L DEM  + + PD ITY+ L+ G    G + EA + F + + +G+  + + F
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTF 522

Query: 545 RILKKRYRRMKESDKARD 562
             +     + +++D+A D
Sbjct: 523 NSIMLGLCKTRQTDRAID 540



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 195/396 (49%), Gaps = 6/396 (1%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
             +IR  C  GK   A  +   +   G VPDV+T+N +++  CK G++  A  V+  MS 
Sbjct: 141 TTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS- 199

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
              SP+  TYN  +   C   +L +A+ +   M      P+ +T+ IL+ A C+   +G 
Sbjct: 200 --VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQ 257

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+K L E+    D   T DV+T  +L++   K G   +A+   NDM     Q +++ +N+
Sbjct: 258 AMKLLDEM---RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           ++   C  G    A      ML++GF P V+T+N L+N LC++G L  A      + K G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG 374

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             P+ +SY  ++ G C    + +A E+L  M+ +   P+   +N ++    + G + +A 
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            I + + S G S  + T+N +I    + G    A  L  EM    + PD  TY+ L+G  
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
              G +  A++ + E  R G+ P+ +T+  ++ G C
Sbjct: 495 SREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLC 530



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 202/414 (48%), Gaps = 6/414 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G+I  AL +  +M      PDV+T+N ++  LC  G L++A  V+  M +  
Sbjct: 178 MISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY   I   CR + + +A+ L   M + G  P+ VT+N+LV+ +CK+G L +A+
Sbjct: 235 CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           KFL ++ +        +VIT  I++ S    G    A  L  DM +K     +V +N+LI
Sbjct: 295 KFLNDMPSSG---CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           N  C  G +  A     +M K G  P+ ++YN LL+  CK+ K+D A  +   +   G  
Sbjct: 352 NFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y T++  LC  G +  A E L  +  K   P    +N +IDG  + G    A  +
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M +  +  +  T+++L+   +R G + +A     E    G+ P+  T+N ++   C 
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCK 531

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
                 A+     M+ RG  P   +YT LI+G    G  KEA E+  ++   GL
Sbjct: 532 TRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 199/392 (50%), Gaps = 3/392 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R ++  D   +  ++R LC  GK+  A+ +  +M+Q+   PDV+T+  L+   C+   + 
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  ++ EM +   +P+  TYN  + G C+   LD+A+   + M ++G +PN +THNI++
Sbjct: 257 QAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
            ++C  G   DA K L ++L       +  V+T  IL++   + G   +A+ +   M + 
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKG---FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKH 373

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             Q + ++YN L++GFC    +  A  Y  +M+ RG  PD++TYNT+L  LCK GK+++A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                 LS  G +P  I+Y T+I GL   G   KA + L  M  K + P+   ++ ++ G
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             R G +  A          GV  N  TFN+++L   +      A      M+  G  P 
Sbjct: 494 LSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPT 553

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
             +Y +LI      G    AL+L +E+  +G+
Sbjct: 554 ETSYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 203/409 (49%), Gaps = 7/409 (1%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           DV ++N+L  +L + G+LE+    +  M      P+       I G+CR+ +  KA  + 
Sbjct: 102 DVESNNHL-RQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKIL 160

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             +  +G  P+ +T+N+++   CK G + +A+  L      D    + DV+T   ++ S 
Sbjct: 161 EVLEGSGAVPDVITYNVMISGYCKAGEINNALSVL------DRMSVSPDVVTYNTILRSL 214

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
             +G   QA+ + + M Q++   D++ Y +LI   C +  +  A     +M  RG  PDV
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDV 274

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TYN L+N +CK+G+LDEA  F   +  +G  P+ I++  I++ +C  G  + A + L  
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           ML K   P    +N++I+   R G L  A  I + M   G   N  ++N L+    +   
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKK 394

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           +  A    + M+  G +PD+ TYN ++ A C  G +  A+++ +++  +G +P +ITY  
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           +I G    G   +A ++  +++   L  D I +  L     R  + D+A
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 147/279 (52%), Gaps = 5/279 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  ++R +C  G+   A  L   M++KG  P V+T N L+N LC+ G L +A  ++ +M 
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  +YN  + G+C+  ++D+A+     M + G  P+ VT+N ++ ALCK G + 
Sbjct: 372 KHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431

Query: 241 DAVKFLGEVLADDDGKATSDV-ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           DAV+ L ++      K  S V IT   ++D   K G   +A+ L ++M  K+++ D + Y
Sbjct: 432 DAVEILNQL----SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           + L+ G    G +  A  +F +  + G  P+ +T+N+++  LCK  + D A  F   +  
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMIN 547

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
            G  P + SY  +I+GL   G   +A E L  +  K ++
Sbjct: 548 RGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 152/299 (50%), Gaps = 8/299 (2%)

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            + G KF    L N ++  N+  DI+    LI GFC  G    A      +   G +PDV
Sbjct: 118 LEEGFKF----LENMVYHGNV-PDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDV 172

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           ITYN +++  CK G+++ A     VL +  V+PD ++Y TI++ LC  G + +A E L  
Sbjct: 173 ITYNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           ML++   P+   + ++I+   R   +  A  + D M   G + +V T+N L+    + G 
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + +A     +M   G  P+V T+N+++ + C+ G    A +L  +MLR+G +P ++T+  
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           LI   C +G +  A ++  K+   G   + + +  L   + + K+ D+A +  ++ + R
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 120/239 (50%), Gaps = 11/239 (4%)

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           NG  SSA + F        L DV + N L   L + G+L+E   F   +   G  PD I 
Sbjct: 88  NGHFSSANSSF-------VLEDVESNNHLRQ-LVRTGELEEGFKFLENMVYHGNVPDIIP 139

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
             T+I+G C  G   KA + L  +     VP+   +NV+I GY + G+++NA S+ D M 
Sbjct: 140 CTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM- 198

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
              VS +V T+N ++ +    G +  A  +   ML    +PDV TY +LI A+C    + 
Sbjct: 199 --SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            A++L DEM  RG TPD++TY  L+ G C  G + EA +    + + G   + I   I+
Sbjct: 257 QAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 20/79 (25%), Positives = 37/79 (46%)

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G +    +  + M+  G  PDII  T LI+G C  G  ++A ++   ++  G   D I +
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITY 175

Query: 545 RILKKRYRRMKESDKARDI 563
            ++   Y +  E + A  +
Sbjct: 176 NVMISGYCKAGEINNALSV 194


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/434 (30%), Positives = 213/434 (49%), Gaps = 3/434 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL L  +++  G  PDV  +  +V  LC++ D  +A  VI  M       + ATYN FI 
Sbjct: 199 ALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIR 258

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C+   + +A+ + + ++  G+R +  T+  LV  LCK        + + E++  + G 
Sbjct: 259 GLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMI--EFGF 316

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
             S+   S  L+D   K G+   A  L N + +  +   +  YN LIN  C +G +  A 
Sbjct: 317 VPSEAAVSN-LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAE 375

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           + F  M  +G  P+ +TY+ L++  CK+GKLD A HF G +++ G+      Y ++I G 
Sbjct: 376 SLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGH 435

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G +  A+     M+   + P   I+  +I GY + G+L NAF +   M   G+S N 
Sbjct: 436 CKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNT 495

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           +TF ALI        + +A  L  EM+   + P+  TYN+LI   C  G+   A +L DE
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE 555

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M+ +G+ PD  TY  LI G C+ G + EA E    +Q     ++ + F  L   Y +   
Sbjct: 556 MVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGR 615

Query: 557 SDKARDIHQKWLLR 570
            D A D  ++ L R
Sbjct: 616 LDDALDACREMLGR 629



 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 228/484 (47%), Gaps = 41/484 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  +C  GK+  A  L   M  KG  P+ +T++ L++  CK G L+ A H + +M+E+
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
                   Y++ I+G+C++ +L  A  LF  M  NG++PN V +  L+   CK+G L +A
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA 479

Query: 243 VKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
            +   E+     GK  S +  T T L+          +A  L+ +M + N+  + V YNV
Sbjct: 480 FRLYHEM----TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNV 535

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT- 360
           LI G C  G+   AF    +M+++G +PD  TY  L++ LC  G++ EA  F   L    
Sbjct: 536 LIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQ 595

Query: 361 ----------------------------------GVAPDQISYKTIIQGLCIHGDIVKAR 386
                                             GVA D + Y  +I G+    D     
Sbjct: 596 QKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSII 655

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + L  M ++ + P+  ++  +ID   + G+L  AF + D+M+S G   NV T+ ALI   
Sbjct: 656 DLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGL 715

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G +  A  L +EML     P+  TY   +    + G+I  A+QL+D +L  G   + 
Sbjct: 716 CKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANT 774

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +TY  LI+G C  G ++EA EV   +   G++ D I +  +   Y R  +  +A  + + 
Sbjct: 775 VTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWES 834

Query: 567 WLLR 570
            L R
Sbjct: 835 MLNR 838



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 195/408 (47%), Gaps = 4/408 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I   C  G++  A  L  +M  KG  P+  T   L++ LC    + +A+ +  EM 
Sbjct: 463 YTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV 522

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TYN  I G+C+     +A  L   M   G+ P+  T+  L+  LC  G + 
Sbjct: 523 EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVS 582

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +F+ ++  +   +   + +  + L+  Y K G    AL    +M  + +  D+V Y+
Sbjct: 583 EAREFMNDLQGE---QQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYS 639

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           VLI G     D  S      QM  +G  PD + Y T+++   K G L  A   + ++   
Sbjct: 640 VLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSE 699

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  P+ ++Y  +I GLC  G + KA      ML  + +P  + +   +D     G++  A
Sbjct: 700 GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKA 759

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + D++L  G  +N  T+N LI    + G I +A  +   M+  GI PD  +Y+ +I  
Sbjct: 760 IQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYE 818

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
            C  G +  A++L++ ML RG+ PD + Y  LI G C  G + +A E+
Sbjct: 819 YCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFEL 866



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 186/408 (45%), Gaps = 38/408 (9%)

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+R M +    P   T +  + G  R+ +   ALHLF  + ++G+RP+   +  +V +LC
Sbjct: 167 VVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLC 226

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           +      A + +G +   +       V T  + +    KN   ++A+ + N +  K ++ 
Sbjct: 227 ELKDFIRAREVIGRM---ESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRA 283

Query: 295 DIVAYNVLINGFC-----------------------------------LNGDISSAFAYF 319
           D+  Y  L+ G C                                     G+I SAF   
Sbjct: 284 DVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLV 343

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            ++ K G  P +  YN L+N +CK GKLDEA   +  +   G+ P+ ++Y  +I   C  
Sbjct: 344 NKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKR 403

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G +  A  FL  M E  +    + ++ +I G+ + G L  A S+ D M++ G+  NV  +
Sbjct: 404 GKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIY 463

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
            +LI    + G + +AF L  EM   GI P+ +T+  LI   C+   +  A +L+ EM+ 
Sbjct: 464 TSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             + P+ +TY  LI+GHC  GN   A E+  ++   GL  D   +R L
Sbjct: 524 WNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 167/355 (47%), Gaps = 37/355 (10%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G    A  L  +M++KG VPD  T+  L++ LC  G + +A   + ++   
Sbjct: 535 VLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGE 594

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +   N   ++A + GYC+   LD AL     M   G+  + V +++L++ + ++      
Sbjct: 595 QQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSI 654

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  L ++   D G    +V+ +T ++D+  K G+   A  LW+ M  +    ++V Y  L
Sbjct: 655 IDLLKQM--HDQGLRPDNVLYTT-MIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTAL 711

Query: 303 INGFCLNGDISSAF----------------AYFC------------------QMLKRGFL 328
           ING C  G +  A                  Y C                   +L  GFL
Sbjct: 712 INGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFL 771

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
            + +TYN L+   CK G++ EA+     +  +G++PD ISY TII   C  GD+ +A + 
Sbjct: 772 ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKL 831

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
             SML + V P+   +N +I G    G+L+ AF +RD M+  GV  N  T+N+LI
Sbjct: 832 WESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 886



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 140/288 (48%), Gaps = 4/288 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++   C  G++  AL   R+M+ +G   D++ ++ L+  + +  D      ++++M + 
Sbjct: 605 ALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQ 664

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   Y   I    +   L  A  L+  M + G  PN VT+  L++ LCK GL+  A
Sbjct: 665 GLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKA 724

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+LA +   +  +  T    +D     G+  +A+ L +D+  +    + V YN+L
Sbjct: 725 ELLCREMLASN---SLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNIL 780

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I GFC  G I  A      M+  G  PD I+Y+T++   C++G L EA   +  +   GV
Sbjct: 781 IRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGV 840

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            PD ++Y  +I G C+ G++ KA E    M+ + V P    +N +I G
Sbjct: 841 NPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 5/106 (4%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E  + L  M D+G     +  D   +  +I + C  G +  A+ L   M+ +G  PD 
Sbjct: 790 IQEAAEVLVNMIDSG-----ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDT 844

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           + +N+L+   C  G+L KA  +  +M      PN ATYN+ I G C
Sbjct: 845 VAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 210/419 (50%), Gaps = 4/419 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  GK   +L+    ++ KG  PDV+    L+       ++EKA  V+ E+ E    P+ 
Sbjct: 89  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDV 147

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             YNA I+G+C+VN+++ A  + + M   G  P+ VT+NI++ +LC +  LG A+  L +
Sbjct: 148 FAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQ 207

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +L D+       VIT TIL+++    G   +A+ L  +M  + +  D+  YN +I G C 
Sbjct: 208 LLLDN---CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G +  A      +  +G  PDVI+YN LL     QGK DE       +   G  P++++
Sbjct: 265 EGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 324

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I  LC  G I +A   L  M+EK + P+ + ++ +I    + G L  A  I D M+
Sbjct: 325 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 384

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           S G   ++  +N ++ A  + G+   A  +  ++   G  P+V +YN +I A  + G   
Sbjct: 385 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 444

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            AL +   M+ +GI PD ITY  LI   C  G ++EA  +   ++  G     I + I+
Sbjct: 445 RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIV 503



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 200/414 (48%), Gaps = 3/414 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   + AVI   C   +I  A  +  +M  +G +PD++T+N ++  LC    L  A  
Sbjct: 144 EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALT 203

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+ ++      P   TY   I        +++A+ L   M   G+ P+  T+N ++  +C
Sbjct: 204 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 263

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G++  A + +  + +        DVI+  IL+ ++   G   +   L  +MF +  + 
Sbjct: 264 KEGMVERAAELITSLTSKG---CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEP 320

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           + V Y++LI+  C  G I  A +    M+++   PD  +Y+ L++ LCK+G+LD A    
Sbjct: 321 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 380

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G  PD ++Y TI+  LC +G+  +A E    +      P    +N +I     C
Sbjct: 381 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSC 440

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           GD S A  +   M+S G+  +  T+N+LI    R G + +A  L  +M   G  P V +Y
Sbjct: 441 GDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISY 500

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           N+++   C +  I  A+ ++ EM+ +G  P+  TY  LI+G    G   EA E+
Sbjct: 501 NIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 554



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 160/320 (50%), Gaps = 9/320 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   + A+IR +C  G +  A  L   +  KG  PDV+++N L+      G  ++ +
Sbjct: 248 LLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGE 307

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM      PN  TY+  I+  CR   +D+A+ +   M    + P+  +++ L+ AL
Sbjct: 308 KLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISAL 367

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G L  A+  +  ++++       D++    ++ +  KNG+  QAL ++N +      
Sbjct: 368 CKEGRLDLAIGIMDYMISNG---CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCP 424

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++ +YN +I+     GD S A      M+ +G  PD ITYN+L++CLC+ G ++EA   
Sbjct: 425 PNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGL 484

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + ++G  P  ISY  ++ GLC    I  A      M+EK   P    + ++I+G G 
Sbjct: 485 LDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGF 544

Query: 414 CG------DLSNAFSIRDLM 427
            G      +L+N+   RD++
Sbjct: 545 AGWRTEAMELANSLFSRDVI 564



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 165/350 (47%), Gaps = 40/350 (11%)

Query: 223 RVTHNI-LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           R TH + L++  CK G   +++ FL E L +     T DVI  T L+  +F N    +  
Sbjct: 77  RETHLMKLLNRSCKAGKFNESLYFL-ECLVNKG--YTPDVILCTKLIKGFF-NFKNIEKA 132

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
           +   ++ + + + D+ AYN +I+GFC    I +A     +M  RGFLPD++TYN ++  L
Sbjct: 133 SRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSL 192

Query: 342 CK-----------------------------------QGKLDEASHFYGVLSKTGVAPDQ 366
           C                                    +G ++EA      +   G+ PD 
Sbjct: 193 CNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDM 252

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
            +Y  II+G+C  G + +A E + S+  K   P+   +N+++  +   G       +   
Sbjct: 253 YTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAE 312

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M S G   N  T++ LI +  R G I +A S+ K M+   + PD ++Y+ LI A C  G 
Sbjct: 313 MFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGR 372

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           + LA+ + D M+  G  PDI+ Y  ++   C  GN  +A E+F K++ +G
Sbjct: 373 LDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 422



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 144/286 (50%), Gaps = 3/286 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   +  ++R     GK      L  +M  +G  P+ +T++ L++ LC+ G +++A  
Sbjct: 284 EPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAIS 343

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V++ M E   +P+  +Y+  I+  C+   LD A+ +   M +NG  P+ V +N ++ ALC
Sbjct: 344 VLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALC 403

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K G    A++   ++          +V +   ++ + +  GD+ +AL +   M  K I  
Sbjct: 404 KNGNANQALEIFNKLRG---MGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDP 460

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D + YN LI+  C +G +  A      M + GF P VI+YN +L  LCK  ++D+A   +
Sbjct: 461 DEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMF 520

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
             + + G  P++ +Y  +I+G+   G   +A E   S+  + V+ +
Sbjct: 521 AEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQ 566


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 218/426 (51%), Gaps = 3/426 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D      +IR LC+ GKIG AL L  KMI +G  P+V+T+  L+N LCK+G+   A  
Sbjct: 132 QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIR 191

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++R M +    P+   Y + I   C+  ++ +A +LFS M   GI P+  T+  LVHALC
Sbjct: 192 LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALC 251

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
                      L +++   + K   DV+  + ++D+  K G   +A  + + M Q+ ++ 
Sbjct: 252 NLCEWKHVTTLLNQMV---NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 308

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D+V Y  L++G CL  ++  A   F  M+++GF PDVI+Y TL+N  CK  K+D+A + +
Sbjct: 309 DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLF 368

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + +    PD  +Y T++ GLC  G +  A      M+ +  +P+   +++++D   + 
Sbjct: 369 EEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKN 428

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
             L  A ++   + +  ++ ++  +N +I    R G +  A  L   +   G+ P V+TY
Sbjct: 429 RHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTY 488

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N++I   C  G ++ A +L+ EM     +PD  TY  + +G         A ++  ++  
Sbjct: 489 NIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLA 548

Query: 535 LGLAID 540
            G + D
Sbjct: 549 RGFSAD 554



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 203/402 (50%), Gaps = 3/402 (0%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T L L  +M   G  P+V T N L+N  C +  +  A  V+ ++ ++   P+  T+   I
Sbjct: 83  TVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLI 142

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   ++ +ALHLF  M + G +PN VT+  L++ LCK G    A++ L  +   + G
Sbjct: 143 RGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM---EQG 199

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               DV+  T ++DS  K+    +A  L++ M  + I  DI  Y  L++  C   +    
Sbjct: 200 NCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHV 259

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                QM+    LPDV+ ++T+++ LCK+GK+ EA     ++ + GV PD ++Y T++ G
Sbjct: 260 TTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDG 319

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C+  ++ +A +    M+ K   P+   +  +I+GY +   +  A  + + M       +
Sbjct: 320 HCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPD 379

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             T+N L+      G + DA +L  EM+  G  PD+ TY++L+ + C   H+  A+ L  
Sbjct: 380 TKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLK 439

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            +    + PDI  Y  +I G C  G ++ A ++F+ + + GL
Sbjct: 440 AIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGL 481



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 201/413 (48%), Gaps = 3/413 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P ++    L+  + K+        +  +M      PN  T N  I  +C +N +  A  +
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
            + +   G +P+  T   L+  LC +G +G+A+    +++  D+G    +V+T   L++ 
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI--DEG-FQPNVVTYGTLING 179

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K G+   A+ L   M Q N Q D+V Y  +I+  C +  ++ AF  F QM+ +G  PD
Sbjct: 180 LCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPD 239

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           + TY +L++ LC   +    +     +  + + PD + + T++  LC  G + +A E + 
Sbjct: 240 IFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVD 299

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M+++ V P+   +  ++DG+    ++  A  + D+M+  G + +V ++  LI    +  
Sbjct: 300 MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIH 359

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            I  A  L +EM      PD  TYN L+   C++G +  A+ L+ EM+ RG  PD++TY+
Sbjct: 360 KIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYS 419

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            L+   C   +++EA  +   I+   L  D   + I+     R  E + ARD+
Sbjct: 420 ILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDL 472



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 176/366 (48%), Gaps = 3/366 (0%)

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
           M P P+   +   +T   ++      L L + M + G+ PN  T NIL+++ C    +G 
Sbjct: 59  MHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGF 118

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A   L ++L         D  T T L+      G   +AL L++ M  +  Q ++V Y  
Sbjct: 119 AFSVLAKILKLGH---QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGT 175

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LING C  G+ S+A      M +    PDV+ Y ++++ LCK  ++ EA + +  +   G
Sbjct: 176 LINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQG 235

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           ++PD  +Y +++  LC   +       L  M+   ++P+  I++ ++D   + G ++ A 
Sbjct: 236 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 295

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            I D+M+  GV  +V T+  L+        + +A  +   M+  G  PDV +Y  LI   
Sbjct: 296 EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGY 355

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C +  I  A+ L++EM R+   PD  TY  L+ G C  G +++A  +F ++   G   D 
Sbjct: 356 CKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDL 415

Query: 542 IPFRIL 547
           + + IL
Sbjct: 416 VTYSIL 421



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 149/324 (45%), Gaps = 38/324 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            V+  LC  GK+  A  +   MIQ+G  PDV+T+  L++  C   ++++A  V   M   
Sbjct: 280 TVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK 339

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  +Y   I GYC+++++DKA++LF  M      P+  T+N L++ LC  G L DA
Sbjct: 340 GFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDA 399

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +                                      AL+++M  +    D+V Y++L
Sbjct: 400 I--------------------------------------ALFHEMVARGQMPDLVTYSIL 421

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++  C N  +  A A    +      PD+  YN +++ +C+ G+L+ A   +  LS  G+
Sbjct: 422 LDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGL 481

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P   +Y  +I GLC  G + +A +  + M      P+   +N I  G+ +  +   A  
Sbjct: 482 HPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQ 541

Query: 423 IRDLMLSFGVSSNVFTFNALILAE 446
           + + ML+ G S++       +L+E
Sbjct: 542 LLEEMLARGFSADSCFLMLSVLSE 565



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 134/282 (47%), Gaps = 38/282 (13%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  ++   CL  ++  A+ +   M++KG  PDV+++  L+N  CKI  ++KA 
Sbjct: 306 VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAM 365

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           ++  EM      P+  TYN  + G C V  L  A+ LF  M   G  P+ VT++IL+ +L
Sbjct: 366 YLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSL 425

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   L +A+  L  + A                                       N+ 
Sbjct: 426 CKNRHLEEAMALLKAIEAS--------------------------------------NLN 447

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DI  YN++I+G C  G++ +A   F  +  +G  P V TYN +++ LCK+G L+EA+  
Sbjct: 448 PDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 507

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           +  +     +PD  +Y TI +G   + + ++A + L  ML +
Sbjct: 508 FMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLAR 549



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 3/221 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR     D   +  +I   C   KI  A++L  +M +K  +PD  T+N L+  LC +G L
Sbjct: 337 VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRL 396

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           + A  +  EM      P+  TY+  +   C+   L++A+ L   +  + + P+   +NI+
Sbjct: 397 QDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNII 456

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  +C+ G L  A      + +         V T  I++    K G   +A  L+ +M  
Sbjct: 457 IDGMCRAGELEAARDLFSNLSSKG---LHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDG 513

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
            +   D   YN +  GF  N +   A     +ML RGF  D
Sbjct: 514 NDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 94/238 (39%), Gaps = 35/238 (14%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           AL+ +N +   +    IV +  L+         S+  +   QM   G  P+V T N L+N
Sbjct: 49  ALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILIN 108

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C   ++  A      + K G  PD  ++ T+I+GLC+                     
Sbjct: 109 SFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVE-------------------- 148

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
                          G +  A  + D M+  G   NV T+  LI    + G+   A  L 
Sbjct: 149 ---------------GKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLL 193

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           + M      PDV  Y  +I + C    +  A  L+ +M+ +GI+PDI TYT L+   C
Sbjct: 194 RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALC 251



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 64/131 (48%)

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L +A S  + +L      ++  F  L+ +  +        SL  +M   G+ P+V+T N+
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI + C+L  +  A  +  ++L+ G  PD  T+T LI+G C  G + EA  +F K+   G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 537 LAIDHIPFRIL 547
              + + +  L
Sbjct: 166 FQPNVVTYGTL 176


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 217/441 (49%), Gaps = 3/441 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  LCL GK+  A+ L  +M++ G  P+ +T+  ++  +CK G    A  ++R+M E 
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +   +   Y+  I G C+   LD A +LF+ M   G + + + +  L+   C  G   D 
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K L +++     K T DV+  + L+D + K G   +A  L  +M Q+ I  D V Y  L
Sbjct: 302 AKLLRDMIKR---KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC    +  A      M+ +G  P++ T+N L+N  CK   +D+    +  +S  GV
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D ++Y T+IQG C  G +  A+E    M+ + V P+   + +++DG    G+   A  
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I + +    +  ++  +N +I        + DA+ L   + L G+ PDV TYN++IG  C
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +  A  L+ +M   G +P+  TY  LI+ H   G+  ++ ++  +I+  G ++D  
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAS 598

Query: 543 PFRILKKRYRRMKESDKARDI 563
             R       RM ++    D+
Sbjct: 599 TLRFALSTLARMLKAGHEPDV 619



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 207/404 (51%), Gaps = 3/404 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            L L ++M  KG   ++ T + ++N  C+   L  A   + ++ ++   P+  T++  I 
Sbjct: 91  VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C    + +AL L   M   G +P  +T N LV+ LC  G + DAV  +  ++  + G 
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV--ETGF 208

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
             ++V    +L     K+G    A+ L   M ++ I+ D V Y+++I+G C +G + +AF
Sbjct: 209 QPNEVTYGPVL-KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F +M  +GF  D+I Y TL+   C  G+ D+ +     + K  + PD +++  +I   
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
              G + +A E    M+++ + P+   +  +IDG+ +   L  A  + DLM+S G   N+
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            TFN LI    +   I D   L ++M L G+  D  TYN LI   C LG + +A +L+ E
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           M+ R + PDI++Y  L+ G C  G  ++A E+F KI+   + +D
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 217/454 (47%), Gaps = 38/454 (8%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C   K+  A     K+I+ G  PD +T + L+N LC  G + +A  ++  M EM   P  
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            T NA + G C   ++  A+ L   M   G +PN VT+  ++  +CK G    A++ L +
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +   ++ K   D +  +I++D   K+G    A  L+N+M  K  + DI+ Y  LI GFC 
Sbjct: 238 M---EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G           M+KR   PDV+ ++ L++C  K+GKL EA   +  + + G++PD ++
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y ++I G C    + KA   L  M+ K   P    +N++I+GY +   + +   +   M 
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             GV ++  T+N LI      G +  A  L +EM+   + PD+ +Y +L+   C+ G   
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474

Query: 489 LALQLYDEMLR-----------------------------------RGITPDIITYTELI 513
            AL++++++ +                                   +G+ PD+ TY  +I
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G C +G++ EA+ +F K++  G + +   + IL
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 198/423 (46%), Gaps = 27/423 (6%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +IR  C  G+      L R MI++   PDV+  + L++   K G L +A+ + +EM 
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   SP+  TY + I G+C+ N+LDKA H+   M + G  PN  T NIL++  CK  L+ 
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           D ++   ++         +D +T   L+  + + G    A  L+ +M  + ++ DIV+Y 
Sbjct: 405 DGLELFRKMSLRG---VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +L++G C NG+   A   F ++ K     D+  YN +++ +C   K+D+A   +  L   
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY--------- 411
           GV PD  +Y  +I GLC  G + +A      M E    P    +N++I  +         
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581

Query: 412 -------GRCG------DLSNAFSIRDLMLSFGVSSNVFTFNALI--LAETRGGSIFDAF 456
                   RCG       L  A S    ML  G   +VFTF  L+         S++DA 
Sbjct: 582 AKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAP 641

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
           +L K M   G  P+V TYN +I    N   I     + D+M  RG  P+ +T +  I G 
Sbjct: 642 TLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGL 701

Query: 517 CAR 519
           C +
Sbjct: 702 CKQ 704



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 184/407 (45%), Gaps = 40/407 (9%)

Query: 166 IGDLEKADHV--IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           I D+++ D V   +EM+  RP P    ++   +   R  + D  L L   M   GI  N 
Sbjct: 48  IVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNL 107

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
            T +I+++  C+   L  A   +G+++                                 
Sbjct: 108 YTLSIMINCCCRCRKLSLAFSAMGKII--------------------------------- 134

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
                +   + D V ++ LING CL G +S A     +M++ G  P +IT N L+N LC 
Sbjct: 135 -----KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            GK+ +A      + +TG  P++++Y  +++ +C  G    A E L  M E+ +  +   
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +++IIDG  + G L NAF++ + M   G  +++  +  LI      G   D   L ++M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
              I PDV  ++ LI      G +  A +L+ EM++RGI+PD +TYT LI G C    + 
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +A  +   + + G   +   F IL   Y +    D   ++ +K  LR
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 2/128 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELC--KIGDLEKADHVIREMSEMRPSPNCATYNAF 194
           AL    +M++ G  PDV T   L+   C  +   +  A  + + M  M   PN  TYN  
Sbjct: 603 ALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTV 662

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           I G    N + +   +   M   G +PN VT +  +  LCK+ L G A+  L ++  D++
Sbjct: 663 IKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDNE 722

Query: 255 GKATSDVI 262
              T   I
Sbjct: 723 DVTTKKKI 730


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 227/449 (50%), Gaps = 6/449 (1%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D L+ M + G V C+   +   +  VI      G +  A  L ++M+Q+G  PD++T+N 
Sbjct: 203 DLLRMMAEGGAV-CS--PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNS 259

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           +V+ LCK   ++KA+  +R+M   R  PN  TYN  I GY    +  +A+ +F  M  + 
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 319

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           I P+ VT ++L+ +LCK G + +A      +          DV +  I+++ Y   G   
Sbjct: 320 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ---NPDVFSYNIMLNGYATKGCLV 376

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
               L++ M    I  D   +NVLI  +   G +  A   F +M   G  PDV+TY T++
Sbjct: 377 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             LC+ GK+D+A   +  +   GVAPD+ +Y  +IQG C HG ++KA+E +  ++   + 
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 496

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
            +   ++ II+   + G + +A +I DL ++ G+  +   ++ L+      G +  A  +
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 556

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
              M+  GI P+V  Y  L+   C +G I   L L+ EML+RGI P  I Y+ +I G   
Sbjct: 557 FDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQ 616

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G    A+  F ++   G+A+D   + I+
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMDICTYNIV 645



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 225/455 (49%), Gaps = 18/455 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTV--PDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           +++ LC  GK G A  L R M + G V  P+V+ +N +++   K GD+ KA  + +EM +
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 247

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               P+  TYN+ +   C+   +DKA      M N  + PN  T+N L++     G   +
Sbjct: 248 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 307

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           AV+   E+          DV+T ++LM S  K G   +A  +++ M  K    D+ +YN+
Sbjct: 308 AVRVFKEMRRH---SILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 364

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           ++NG+   G +      F  ML  G  PD  T+N L+      G LD+A   +  +   G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V PD ++Y+T+I  LC  G +  A E    M+++ V P+ + +N +I G+   G L  A 
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 484

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   +++ G+  ++  F+++I    + G + DA ++    +  G+ PD   Y++L+   
Sbjct: 485 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGY 544

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C +G +  AL+++D M+  GI P+++ Y  L+ G+C  G + E   +F ++   G+    
Sbjct: 545 CLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPST 604

Query: 542 IPFRIL-------------KKRYRRMKESDKARDI 563
           I + I+             K ++  M ES  A DI
Sbjct: 605 ILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDI 639



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 189/359 (52%), Gaps = 2/359 (0%)

Query: 187 NCATYNAFITGYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           N    N  + G+C     D+AL  L       G  P+  +++IL+ +LC +G  G A   
Sbjct: 145 NIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 204

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L  ++A+     + +V+    ++D +FK GD  +A  L+ +M Q+ I  D+V YN +++ 
Sbjct: 205 L-RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 263

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C    +  A A+  QM+ +  LP+  TYN L+      G+  EA   +  + +  + PD
Sbjct: 264 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++   ++  LC +G I +AR+   +M  K   P+   +N++++GY   G L +   + D
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
           LML  G++ + +TFN LI A    G +  A  +  EM   G+ PDV TY  +I A C +G
Sbjct: 384 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            +  A++ +++M+ +G+ PD   Y  LI+G C  G++ +A+E+ ++I   G+ +D + F
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 502



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 186/406 (45%), Gaps = 7/406 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G  PD  T N L+      G L+KA  +  EM +    P+  TY   I   CR+ +
Sbjct: 385 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 444

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A+  F+ M + G+ P++  +N L+   C  G L  A + + E++  ++G     V  
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM--NNGMHLDIVFF 502

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           S+I+ ++  K G    A  +++      +  D V Y++L++G+CL G +  A   F  M+
Sbjct: 503 SSII-NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV 561

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  P+V+ Y TL+N  CK G++DE    +  + + G+ P  I Y  II GL   G  V
Sbjct: 562 SAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTV 621

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGY--GRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
            A+     M E  +  +   +N+++ G    RC D    F  ++L  +  V  N+ T N 
Sbjct: 622 PAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFD-EAIFLFKELR-AMNVKINIITLNT 679

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I    +   + +A  L   +    + P V TY+++I      G +  A  ++  M   G
Sbjct: 680 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             P+      +++    +  +  A    +KI     +++H+   +L
Sbjct: 740 CEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLL 785



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 142/293 (48%), Gaps = 3/293 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I +LC  G++  A  +    +  G  PD + ++ L++  C +G +EKA  V   M   
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   Y   + GYC++  +D+ L LF  M   GI+P+ + ++I++  L + G    A
Sbjct: 564 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 623

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+   + G A  D+ T  I++   FKN    +A+ L+ ++   N++ +I+  N +
Sbjct: 624 KVKFHEM--TESGIAM-DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 680

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G      +  A   F  + +   +P V+TY+ ++  L K+G ++EA   +  +   G 
Sbjct: 681 IDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 740

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            P+      +++ L    +IV+A  +L  + E++   E     +++D +   G
Sbjct: 741 EPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 38/261 (14%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT---GVAPDQISYKT 371
           A A+F Q+L+ G   ++I  N LL   C+  + DEA     +L +T   G  PD  SY  
Sbjct: 130 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI--LLHRTPELGCVPDVFSYSI 187

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +++ LC  G   +A + L  M E   V  P                              
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSP------------------------------ 217

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              NV  +N +I    + G +  A  L KEM+  GI PD+ TYN ++ A C    +  A 
Sbjct: 218 ---NVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAE 274

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
               +M+ + + P+  TY  LI G+ + G  KEA  VF +++   +  D +   +L    
Sbjct: 275 AFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSL 334

Query: 552 RRMKESDKARDIHQKWLLRNK 572
            +  +  +ARD+     ++ +
Sbjct: 335 CKYGKIKEARDVFDTMAMKGQ 355



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/244 (20%), Positives = 106/244 (43%), Gaps = 3/244 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   +E +   +  ++   C  G+I   L L R+M+Q+G  P  + ++ +++ L + G  
Sbjct: 561 VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRT 620

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A     EM+E   + +  TYN  + G  +    D+A+ LF  +    ++ N +T N +
Sbjct: 621 VPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 680

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  + +   + +A      +      +    V+T +I++ +  K G   +A  +++ M  
Sbjct: 681 IDGMFQTRRVEEAKDLFASI---SRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQN 737

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
              + +    N ++       +I  A AY  ++ +R F  + +T   L++    +G   E
Sbjct: 738 AGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797

Query: 350 ASHF 353
              F
Sbjct: 798 HIRF 801


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 214/416 (51%), Gaps = 3/416 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A  L ++M+Q+G  PD++T+N +V+ LCK   ++KA+  +R+M   R  PN  TY
Sbjct: 246 GDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTY 305

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GY    +  +A+ +F  M  + I P+ VT ++L+ +LCK G + +A      +  
Sbjct: 306 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM 365

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   DV +  I+++ Y   G       L++ M    I  D   +NVLI  +   G 
Sbjct: 366 KGQ---NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 422

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F +M   G  PDV+TY T++  LC+ GK+D+A   +  +   GVAPD+ +Y  
Sbjct: 423 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 482

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +IQG C HG ++KA+E +  ++   +  +   ++ II+   + G + +A +I DL ++ G
Sbjct: 483 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 542

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  +   ++ L+      G +  A  +   M+  GI P+V  Y  L+   C +G I   L
Sbjct: 543 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 602

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            L+ EML+RGI P  I Y+ +I G    G    A+  F ++   G+A+D   + I+
Sbjct: 603 SLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIV 658



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 225/455 (49%), Gaps = 18/455 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTV--PDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           +++ LC  GK G A  L R M + G V  P+V+ +N +++   K GD+ KA  + +EM +
Sbjct: 201 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 260

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               P+  TYN+ +   C+   +DKA      M N  + PN  T+N L++     G   +
Sbjct: 261 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 320

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           AV+   E+          DV+T ++LM S  K G   +A  +++ M  K    D+ +YN+
Sbjct: 321 AVRVFKEMRRHS---ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 377

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           ++NG+   G +      F  ML  G  PD  T+N L+      G LD+A   +  +   G
Sbjct: 378 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 437

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V PD ++Y+T+I  LC  G +  A E    M+++ V P+ + +N +I G+   G L  A 
Sbjct: 438 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 497

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   +++ G+  ++  F+++I    + G + DA ++    +  G+ PD   Y++L+   
Sbjct: 498 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGY 557

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C +G +  AL+++D M+  GI P+++ Y  L+ G+C  G + E   +F ++   G+    
Sbjct: 558 CLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPST 617

Query: 542 IPFRIL-------------KKRYRRMKESDKARDI 563
           I + I+             K ++  M ES  A DI
Sbjct: 618 ILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDI 652



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 189/359 (52%), Gaps = 2/359 (0%)

Query: 187 NCATYNAFITGYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           N    N  + G+C     D+AL  L       G  P+  +++IL+ +LC +G  G A   
Sbjct: 158 NIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 217

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L  ++A+     + +V+    ++D +FK GD  +A  L+ +M Q+ I  D+V YN +++ 
Sbjct: 218 L-RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 276

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C    +  A A+  QM+ +  LP+  TYN L+      G+  EA   +  + +  + PD
Sbjct: 277 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 336

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++   ++  LC +G I +AR+   +M  K   P+   +N++++GY   G L +   + D
Sbjct: 337 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 396

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
           LML  G++ + +TFN LI A    G +  A  +  EM   G+ PDV TY  +I A C +G
Sbjct: 397 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 456

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            +  A++ +++M+ +G+ PD   Y  LI+G C  G++ +A+E+ ++I   G+ +D + F
Sbjct: 457 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 515



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 187/406 (46%), Gaps = 7/406 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G  PD  T N L+      G L+KA  +  EM +    P+  TY   I   CR+ +
Sbjct: 398 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 457

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A+  F+ M + G+ P++  +N L+   C  G L  A + + E++  ++G     V  
Sbjct: 458 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM--NNGMHLDIVFF 515

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           S+I+ ++  K G    A  +++      +  D V Y++L++G+CL G +  A   F  M+
Sbjct: 516 SSII-NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV 574

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  P+V+ Y TL+N  CK G++DE    +  + + G+ P  I Y  II GL   G  V
Sbjct: 575 SAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTV 634

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGY--GRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
            A+     M E  +  +   +N+++ G    RC D    F  ++L  +  V  N+ T N 
Sbjct: 635 PAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFD-EAIFLFKELR-AMNVKINIITLNT 692

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I    +   + +A  L   +    + P+V TY+++I      G +  A  ++  M   G
Sbjct: 693 MIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 752

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             P+      +++    +  +  A    +KI     +++H+   +L
Sbjct: 753 CEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLL 798



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 143/293 (48%), Gaps = 3/293 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I +LC  G++  A  +    +  G  PD + ++ L++  C +G +EKA  V   M   
Sbjct: 517 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 576

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   Y   + GYC++  +D+ L LF  M   GI+P+ + ++I++  L + G    A
Sbjct: 577 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 636

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+   + G A  D+ T  I++   FKN    +A+ L+ ++   N++ +I+  N +
Sbjct: 637 KMKFHEM--TESGIAM-DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 693

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G      +  A   F  + +   +P+V+TY+ ++  L K+G ++EA   +  +   G 
Sbjct: 694 IDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 753

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            P+      +++ L    +IV+A  +L  + E++   E     +++D +   G
Sbjct: 754 EPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 806



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 38/261 (14%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT---GVAPDQISYKT 371
           A A+F Q+L+ G   ++I  N LL   C+  + DEA     +L +T   G  PD  SY  
Sbjct: 143 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI--LLHRTPELGCVPDVFSYSI 200

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +++ LC  G   +A + L  M E   V  P                              
Sbjct: 201 LLKSLCDQGKSGQADDLLRMMAEGGAVCSP------------------------------ 230

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              NV  +N +I    + G +  A  L KEM+  GI PD+ TYN ++ A C    +  A 
Sbjct: 231 ---NVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAE 287

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
               +M+ + + P+  TY  LI G+ + G  KEA  VF +++   +  D +   +L    
Sbjct: 288 AFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSL 347

Query: 552 RRMKESDKARDIHQKWLLRNK 572
            +  +  +ARD+     ++ +
Sbjct: 348 CKYGKIKEARDVFDTMAMKGQ 368



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/244 (20%), Positives = 107/244 (43%), Gaps = 3/244 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   +E +   +  ++   C  G+I   L L R+M+Q+G  P  + ++ +++ L + G  
Sbjct: 574 VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRT 633

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A     EM+E   + +  TYN  + G  +    D+A+ LF  +    ++ N +T N +
Sbjct: 634 VPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 693

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  + +   + +A      +      +   +V+T +I++ +  K G   +A  +++ M  
Sbjct: 694 IDGMFQTRRVEEAKDLFASI---SRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQN 750

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
              + +    N ++       +I  A AY  ++ +R F  + +T   L++    +G   E
Sbjct: 751 AGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 810

Query: 350 ASHF 353
              F
Sbjct: 811 QIRF 814



 Score = 39.3 bits (90), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 44/97 (45%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
           VP+V+T++ ++  L K G +E+A+ +   M      PN    N  +    + NE+ +A  
Sbjct: 719 VPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGA 778

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
             S +         +T  +LV     KG   + ++FL
Sbjct: 779 YLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 218/438 (49%), Gaps = 3/438 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C+ G I  AL   + ++ +G + D  T+  L+N L K G ++ A H+++EM + 
Sbjct: 130 TIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKS 189

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   Y+A I G C+   +  AL L S +   GI  + VT+N L+   C  G   + 
Sbjct: 190 SVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEV 249

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +++ ++      D  T  IL+D+  K G   +A  +   M ++  + DIV YN L
Sbjct: 250 TQLLTKMVREN---VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNAL 306

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + G+C   ++  A   F +M+KRG  PDV+ YN L++  CK   +DEA   +  L    +
Sbjct: 307 MEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNL 366

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P   SY ++I GLC  G I   ++ L  M   +  P+   +N++ID   + G +  A  
Sbjct: 367 VPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALG 426

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +  +M+  GV  N+ T+NA++       ++  A  +   M+  G+ PD+  YN+LI   C
Sbjct: 427 VLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYC 486

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               +  A+ L+ EM  + + PDI +Y  LI G C  G +   +E+  ++   G + D I
Sbjct: 487 KTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVI 546

Query: 543 PFRILKKRYRRMKESDKA 560
            + IL   + + +  DKA
Sbjct: 547 TYNILLDAFCKTQPFDKA 564



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 209/410 (50%), Gaps = 3/410 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  L   G+I  AL L ++M +    P+++ ++ L++ LCK G +  A  +  ++ E 
Sbjct: 165 TLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGER 224

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +  TYN+ I G C V    +   L + M    + P+  T NIL+ ALCK+G + +A
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L   +    G+   D++T   LM+ Y    +  +A  L+N M ++ ++ D++ YNVL
Sbjct: 285 QGVLA--MMSKRGEK-PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVL 341

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G+C    +  A   F ++  +  +P + +YN+L++ LC  G++         +  +  
Sbjct: 342 IDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ 401

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y  +I  LC  G I++A   L+ M++K V P    +N ++DGY    +++ A  
Sbjct: 402 PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKD 461

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I + M+  G+  ++  +N LI    +   + +A  L KEM    + PD+ +YN LI   C
Sbjct: 462 IFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLC 521

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           NLG I    +L DEM   G +PD+ITY  L+   C      +A  +F +I
Sbjct: 522 NLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI 571



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 220/448 (49%), Gaps = 4/448 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G+      L  KM+++   PD  T N L++ LCK G + +A  V+  MS+ 
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKR 294

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYNA + GYC    + +A  LF+ M   G+ P+ + +N+L+   CK  ++ +A
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEA 354

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E+    +      + +   L+D    +G       L ++M       D+V YN+L
Sbjct: 355 MVLFKELC---NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+  C  G I  A      M+K+G  P+++TYN +++  C +  ++ A   +  + K+G+
Sbjct: 412 IDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGL 471

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y  +I G C    + +A      M  K+++P+   +N +IDG    G + +   
Sbjct: 472 EPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQE 531

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M   G S +V T+N L+ A  +      A SL ++ +++GI+PD +T + ++   C
Sbjct: 532 LLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQ-IVEGIWPDFYTNHAIVDNLC 590

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               + +A      +L  G +P++ TYT LI   C  G+  EA  + +K++      D I
Sbjct: 591 KGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAI 650

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLR 570
            F I+     +  E+DKA  + ++ + R
Sbjct: 651 TFEIIIGVLLQRNETDKAEKLREEMIAR 678



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 212/432 (49%), Gaps = 4/432 (0%)

Query: 107 TGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI 166
           T  VR  ++ D      +I  LC  G+I  A  +   M ++G  PD++T+N L+   C  
Sbjct: 254 TKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSR 313

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
            ++ +A  +   M +    P+   YN  I GYC+   +D+A+ LF  + N  + P   ++
Sbjct: 314 ENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASY 373

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           N L+  LC  G +    K L E+          DV+T  IL+D+  K G   +AL +   
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEM---HGSAQPPDVVTYNILIDALCKEGRILEALGVLVM 430

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +K ++ +IV YN +++G+CL  +++ A   F +M+K G  PD++ YN L+N  CK   
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEM 490

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           +DEA   +  +    + PD  SY ++I GLC  G I   +E L  M +    P+   +N+
Sbjct: 491 VDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNI 550

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           ++D + +      A S+   ++  G+  + +T +A++    +G  +  A    K +L+ G
Sbjct: 551 LLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG 609

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             P+V TY +LI A C  G    A+ L  +M      PD IT+  +I     R    +AE
Sbjct: 610 CSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAE 669

Query: 527 EVFAKIQTLGLA 538
           ++  ++   GL 
Sbjct: 670 KLREEMIARGLV 681



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 222/467 (47%), Gaps = 38/467 (8%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C    +  A+    +M++    P     + L+  + ++G    A  +  ++     SP+ 
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
           AT+   I  Y   +    A  L +T+  +G +PN VT N +++  C  G++  A+ F   
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +LA        D  T   L++   KNG    AL L  +M + ++Q ++V Y+ LI+G C 
Sbjct: 151 LLAQG---YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLN----------------------------- 339
           +G +S A     Q+ +RG L D +TYN+L++                             
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT 267

Query: 340 ------CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
                  LCK+G++ EA     ++SK G  PD ++Y  +++G C   ++ +ARE    M+
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           ++ + P+   +NV+IDGY +   +  A  +   + +  +   + ++N+LI      G I 
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRIS 387

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
               L  EM      PDV TYN+LI A C  G I  AL +   M+++G+ P+I+TY  ++
Sbjct: 388 HVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            G+C R N+  A+++F ++   GL  D + + +L   Y + +  D+A
Sbjct: 448 DGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEA 494



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 159/305 (52%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+ +  + G    A++L+  +  K I   I  + +LIN +      + AF+    +LK G
Sbjct: 61  LLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSG 120

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           + P+++T+NT++N  C  G + +A  F   L   G   DQ +Y T+I GL  +G I  A 
Sbjct: 121 YQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAAL 180

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             L  M + SV P   +++ +IDG  + G +S+A  +   +   G+  +  T+N+LI   
Sbjct: 181 HLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGC 240

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G   +   L  +M+ + + PD +T+N+LI A C  G I  A  +   M +RG  PDI
Sbjct: 241 CSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDI 300

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +TY  L++G+C+R N+ EA E+F ++   GL  D + + +L   Y + K  D+A  + ++
Sbjct: 301 VTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKE 360

Query: 567 WLLRN 571
              +N
Sbjct: 361 LCNKN 365


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 218/486 (44%), Gaps = 46/486 (9%)

Query: 105 RDTGPVRCTLETDYRRHVAV--------IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           RD    +   E   RR  A+        I  LC  G +  A   + +M+  G  PD  T+
Sbjct: 259 RDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTY 318

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
             L+N LCK G L++A  ++ EMS     PN   Y   + G+ +  +  +A  + + M +
Sbjct: 319 GALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMIS 378

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G++PN++ ++ L+  LCK G LG A K L E++         D  T   LM  +F++ D
Sbjct: 379 AGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGH---RPDTFTYHPLMQGHFQHYD 435

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF--------- 327
           K  A  L N+M    I  +   Y ++ING C NG+   A     +M+  G          
Sbjct: 436 KDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAP 495

Query: 328 --------------------------LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
                                     LPD+  YN+L+  L   G+++EA  +Y  + K G
Sbjct: 496 LIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRG 555

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD+ +Y  +I G C   ++ KA + L  ML   + P    +  +++GY +  D     
Sbjct: 556 LVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVS 615

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           SI   ML  G   +   +  +I   +R  ++  AF +  E+  +G+ PD+  Y+ LI   
Sbjct: 616 SILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGL 675

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C +  +  A+ L DEM + G+ P I+ Y  LI G C  G++  A  VF  I   GL  + 
Sbjct: 676 CKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNC 735

Query: 542 IPFRIL 547
           + +  L
Sbjct: 736 VTYTAL 741



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 210/437 (48%), Gaps = 3/437 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G + TA  +   M   G  P     N L+ +L +   +E    +   M      P+  TY
Sbjct: 189 GSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTY 248

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           + F+  +C+  + D A  +F  M       N VT+N+++  LC+ G + +A  F  E++ 
Sbjct: 249 STFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMV- 307

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             D   + D  T   LM+   K G   +A AL ++M    ++ ++V Y  L++GF   G 
Sbjct: 308 --DYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGK 365

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
            + AF    +M+  G  P+ I Y+ L+  LCK G+L  AS     + K G  PD  +Y  
Sbjct: 366 AAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHP 425

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++QG   H D   A E L  M    ++P  + + ++I+G  + G+   A ++ + M+S G
Sbjct: 426 LMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEG 485

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N F +  LI+  ++ G I  A    + M    + PD+F YN LI     +G I  A 
Sbjct: 486 LKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAE 545

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           + Y ++ +RG+ PD  TY+ LI G+C   N+++A+++  ++   GL  +   +  L + Y
Sbjct: 546 EYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGY 605

Query: 552 RRMKESDKARDIHQKWL 568
            +  + +K   I Q  L
Sbjct: 606 FKSNDHEKVSSILQSML 622



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 208/468 (44%), Gaps = 74/468 (15%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK   A  +  +MI  G  P+ + ++ L+  LCKIG L +A  ++ EM ++   P+  TY
Sbjct: 364 GKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTY 423

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  + G+ +  + D A  L + M N+GI PN  T+ I+++ LC+ G   +A   L E+++
Sbjct: 424 HPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMIS 483

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
           +       +      L+  + K G    A     +M + N+  D+  YN LI G    G 
Sbjct: 484 EG---LKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGR 540

Query: 312 ISSAFAYFCQMLKRGFL-----------------------------------PDVITYNT 336
           I  A  Y+ Q+ KRG +                                   P+  TY  
Sbjct: 541 IEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTD 600

Query: 337 LLNCLCKQGKLDEAS---------------HFYGVL--------------------SKTG 361
           LL    K    ++ S               H YG++                     K G
Sbjct: 601 LLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNG 660

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD   Y ++I GLC   D+ KA   L  M ++ + P    +N +IDG+ R GD+S A 
Sbjct: 661 LVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRAR 720

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           ++ D +L+ G+  N  T+ ALI    + G I DAF L K+ML  GI PD F YN+L    
Sbjct: 721 NVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGC 780

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            +   +  AL L +EM  RG    +  ++ L++G C RG ++E E++ 
Sbjct: 781 SDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLL 827



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 204/438 (46%), Gaps = 3/438 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +++DL     +     L+  M   G  PDV T++  +   CK  D + A  V  EM   
Sbjct: 215 GLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRR 274

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             + N  TYN  I+G CR   +++A      M + G+ P+  T+  L++ LCK G L +A
Sbjct: 275 DCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEA 334

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E+          +V+    L+D + K G   +A  + N+M    +Q + + Y+ L
Sbjct: 335 KALLDEMSCSG---LKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNL 391

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G C  G +  A     +M+K G  PD  TY+ L+    +    D A      +  +G+
Sbjct: 392 IRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGI 451

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+  +Y  +I GLC +G+  +A   L  M+ + + P   ++  +I G+ + G +S A  
Sbjct: 452 LPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACE 511

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
             + M    V  ++F +N+LI   +  G I +A     ++   G+ PD FTY+ LI   C
Sbjct: 512 SLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYC 571

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
              ++  A QL  +ML  G+ P+  TYT+L++G+    + ++   +   +   G   D+ 
Sbjct: 572 KTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNH 631

Query: 543 PFRILKKRYRRMKESDKA 560
            + I+ +   R +  + A
Sbjct: 632 IYGIVIRNLSRSENMEVA 649



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 194/420 (46%), Gaps = 8/420 (1%)

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
            V DVL   Y  N     G +  A  V+  M ++  +P     N  +    R + ++   
Sbjct: 176 AVLDVLVDTYKKN-----GSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVW 230

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
            L   M   GI P+  T++  + A CK      A K   E+   D      + +T  +++
Sbjct: 231 KLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRD---CAMNEVTYNVMI 287

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
               ++G   +A     +M    +  D   Y  L+NG C  G +  A A   +M   G  
Sbjct: 288 SGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLK 347

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+V+ Y TL++   K+GK  EA      +   GV P++I Y  +I+GLC  G + +A + 
Sbjct: 348 PNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKL 407

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  M++    P+   ++ ++ G+ +  D   AF + + M + G+  N +T+  +I    +
Sbjct: 408 LNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQ 467

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G   +A +L +EM+ +G+ P+ F Y  LI      GHI LA +  + M +  + PD+  
Sbjct: 468 NGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFC 527

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           Y  LIKG    G ++EAEE +A++Q  GL  D   +  L   Y + +  +KA  + Q+ L
Sbjct: 528 YNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQML 587



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 157/335 (46%), Gaps = 37/335 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I+ L   G+I  A     ++ ++G VPD  T++ L++  CK  +LEKAD ++++M   
Sbjct: 530 SLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNS 589

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY   + GY + N+ +K   +  +M  +G +P+   + I++  L +   +  A
Sbjct: 590 GLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVA 649

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L EV   +      D+   + L+    K  D  +A+ L ++M ++ ++  IV YN L
Sbjct: 650 FMVLTEV---EKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNAL 706

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC +GDIS A   F  +L +G LP+ +TY  L++  CK G + +A   Y  +   G+
Sbjct: 707 IDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGI 766

Query: 363 APDQISY----------------------------------KTIIQGLCIHGDIVKAREF 388
           APD   Y                                   T+++G C  G + +  + 
Sbjct: 767 APDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKL 826

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           L  M+++ +VP       +I  +G+ G L  A  +
Sbjct: 827 LHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRV 861



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 117/254 (46%), Gaps = 4/254 (1%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           + M+  G  PD   +  ++  L +  ++E A  V+ E+ +    P+   Y++ I+G C++
Sbjct: 619 QSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKM 678

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            +++KA+ L   MA  G+ P  V +N L+   C+ G +  A      +LA        + 
Sbjct: 679 ADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKG---LLPNC 735

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T T L+D   KNGD   A  L+ DM  + I  D   YNVL  G     D+  A     +
Sbjct: 736 VTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEE 795

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M  RG+   V  ++TL+   CK+G+L E      V+    + P+  + + +I      G 
Sbjct: 796 MFNRGY-AHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGK 854

Query: 382 IVKAREFLLSMLEK 395
           + +A      + +K
Sbjct: 855 LCEAHRVFAELQQK 868



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 108/272 (39%), Gaps = 44/272 (16%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLE-----TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           I+  NL R + M     V   +E      D   + ++I  LC    +  A+ L  +M ++
Sbjct: 635 IVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKE 694

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P ++ +N L++  C+ GD+ +A +V   +      PNC TY A I G C+  ++  A
Sbjct: 695 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDA 754

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L+  M + GI P+   +N+L                             SD       
Sbjct: 755 FDLYKDMLDRGIAPDAFVYNVLA-------------------------TGCSDA------ 783

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
                   D  QAL L  +MF +     +  ++ L+ GFC  G +         M+ R  
Sbjct: 784 -------ADLEQALFLTEEMFNRGY-AHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREI 835

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           +P+  T   ++    K GKL EA   +  L +
Sbjct: 836 VPNAQTVENVITEFGKAGKLCEAHRVFAELQQ 867



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 1/140 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I   C  G I  A  L + M+ +G  PD   +N L        DLE+A  +  EM 
Sbjct: 738 YTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMF 797

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
             R   + + ++  + G+C+   L +   L   M +  I PN  T   ++    K G L 
Sbjct: 798 N-RGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLC 856

Query: 241 DAVKFLGEVLADDDGKATSD 260
           +A +   E+      ++++D
Sbjct: 857 EAHRVFAELQQKKASQSSTD 876


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 210/421 (49%), Gaps = 8/421 (1%)

Query: 150 VPD--VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           +PD  V ++N L+  LC  G +E A  +  EM+     P+  TY   I GYC + EL+ A
Sbjct: 257 LPDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENA 313

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + L   M   G+ PN   +  +V  LC KG + DA+  + +++     K   D    T +
Sbjct: 314 VKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHH---KVILDEAVYTTV 370

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +  +   GD   A   +++M +K + TD V Y  LING C  G++  A     +ML R  
Sbjct: 371 LSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRL 430

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             D +TY  L++  CK+GK+ EA   +  + + GVAP+ ++Y  +  GLC  GD+  A E
Sbjct: 431 DVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANE 490

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L  M  K +      +N +I+G  + G L  A      M + G+  +V+T+  LI A  
Sbjct: 491 LLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALC 550

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G +  A  L +EML +GI P + TYN+L+   C  G +    +L + ML + I P+  
Sbjct: 551 KSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNAT 610

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           TY  L+K +C   NMK   E++  + +  +  +   + IL K + + +   +A+  H + 
Sbjct: 611 TYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEM 670

Query: 568 L 568
           +
Sbjct: 671 I 671



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 203/417 (48%), Gaps = 3/417 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G++  A+ L   M+ +G  P+   +  +V  LC  G +  A  V+ +M   +
Sbjct: 300 LIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHK 359

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              + A Y   ++G+C   +L  A   F  M   G+  + VT+  L++ LC+ G L +A 
Sbjct: 360 VILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAE 419

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L E+LA    +   D +T T+L+D Y K G   +A  + N M Q+ +  ++V Y  L 
Sbjct: 420 KVLQEMLAR---RLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALS 476

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  GD+ +A     +M  +G   +  TYN+L+N LCK G LD+A      +   G+ 
Sbjct: 477 DGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLK 536

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y T+I  LC  G++ +A + L  ML+  + P    +NV+++G+   G +     +
Sbjct: 537 PDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKL 596

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + ML   +  N  T+N+L+     G ++     + K M    + P+  TYN+LI   C 
Sbjct: 597 LEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCK 656

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
              +  A   ++EM+ +G      +Y+ LI+    +    EA ++F  ++  G   +
Sbjct: 657 ARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAE 713



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 179/398 (44%), Gaps = 5/398 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E +   + +V+  LC  G++  AL +   M+    + D   +  +++  C  GDL  A 
Sbjct: 325 VEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSAR 384

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
               EM     + +  TY   I G CR  EL +A  +   M    +  + VT+ +LV   
Sbjct: 385 RWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGY 444

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G + +A +    ++         +V+T T L D   K GD   A  L ++M  K ++
Sbjct: 445 CKRGKMAEAFQVHNTMVQRG---VAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLE 501

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +   YN LING C  G +  A      M   G  PDV TY TL++ LCK G+LD A   
Sbjct: 502 LNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDL 561

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+ P  ++Y  ++ G C+ G +   ++ L  MLEK++ P    +N ++  Y  
Sbjct: 562 LQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCI 621

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             ++ +   I   M S  V  N  T+N LI    +  S+ +A     EM+  G      +
Sbjct: 622 GNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASS 681

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGIT--PDIITY 509
           Y+ LI           A +L+ +M + G T  PD+  +
Sbjct: 682 YSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF 719



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 181/382 (47%), Gaps = 3/382 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  V+   C  G + +A     +M +KG   D +T+  L+N LC+ G+L++A+ V++EM 
Sbjct: 367 YTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEML 426

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
             R   +  TY   + GYC+  ++ +A  + +TM   G+ PN VT+  L   LCK+G + 
Sbjct: 427 ARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQ 486

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A + L E+    +     +  T   L++   K G   QA+    DM    ++ D+  Y 
Sbjct: 487 AANELLHEM---SNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYT 543

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+  C +G++  A     +ML  G  P ++TYN L+N  C  G+++        + + 
Sbjct: 544 TLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEK 603

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            + P+  +Y ++++  CI  ++    E    M  ++V P  + +N++I G+ +   +  A
Sbjct: 604 NIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEA 663

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
               + M+  G      +++ALI    +     +A  L  +M  +G   +   YN  I  
Sbjct: 664 QYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDF 723

Query: 481 SCNLGHIHLALQLYDEMLRRGI 502
           + N  ++   L L DE++   I
Sbjct: 724 NFNEDNLEATLALCDELVEASI 745



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 148/296 (50%), Gaps = 3/296 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  ++   C  GK+  A  +   M+Q+G  P+V+T+  L + LCK GD++ A+
Sbjct: 430 LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAAN 489

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EMS      N  TYN+ I G C+   LD+A+   + M   G++P+  T+  L+ AL
Sbjct: 490 ELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDAL 549

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G L  A   L E+L D+  K T  ++T  +LM+ +  +G       L   M +KNI 
Sbjct: 550 CKSGELDRAHDLLQEML-DNGIKPT--IVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIH 606

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +   YN L+  +C+  ++ S    +  M  R   P+  TYN L+   CK   + EA +F
Sbjct: 607 PNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYF 666

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           +  + + G      SY  +I+ L      V+AR+    M ++    EP ++N  ID
Sbjct: 667 HNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID 722


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 218/438 (49%), Gaps = 3/438 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C+ G I  AL   + ++ +G + D  T+  L+N L K G ++ A H+++EM + 
Sbjct: 130 TIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKS 189

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   Y+A I G C+   +  AL L S +   GI  + VT+N L+   C  G   + 
Sbjct: 190 SVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEV 249

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +++ ++      D  T  IL+D+  K G   +A  +   M ++  + DIV YN L
Sbjct: 250 TQLLTKMVREN---VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNAL 306

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + G+C   ++  A   F +M+KRG  PDV+ YN L++  CK   +DEA   +  L    +
Sbjct: 307 MEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNL 366

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P   SY ++I GLC  G I   ++ L  M   +  P+   +N++ID   + G +  A  
Sbjct: 367 VPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALG 426

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +  +M+  GV  N+ T+NA++       ++  A  +   M+  G+ PD+  YN+LI   C
Sbjct: 427 VLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYC 486

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               +  A+ L+ EM  + + PDI +Y  LI G C  G +   +E+  ++   G + D I
Sbjct: 487 KTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVI 546

Query: 543 PFRILKKRYRRMKESDKA 560
            + IL   + + +  DKA
Sbjct: 547 TYNILLDAFCKTQPFDKA 564



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 209/410 (50%), Gaps = 3/410 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  L   G+I  AL L ++M +    P+++ ++ L++ LCK G +  A  +  ++ E 
Sbjct: 165 TLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGER 224

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +  TYN+ I G C V    +   L + M    + P+  T NIL+ ALCK+G + +A
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L   +    G+   D++T   LM+ Y    +  +A  L+N M ++ ++ D++ YNVL
Sbjct: 285 QGVLA--MMSKRGEK-PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVL 341

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G+C    +  A   F ++  +  +P + +YN+L++ LC  G++         +  +  
Sbjct: 342 IDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ 401

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y  +I  LC  G I++A   L+ M++K V P    +N ++DGY    +++ A  
Sbjct: 402 PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKD 461

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I + M+  G+  ++  +N LI    +   + +A  L KEM    + PD+ +YN LI   C
Sbjct: 462 IFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLC 521

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           NLG I    +L DEM   G +PD+ITY  L+   C      +A  +F +I
Sbjct: 522 NLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI 571



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 220/448 (49%), Gaps = 4/448 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G+      L  KM+++   PD  T N L++ LCK G + +A  V+  MS+ 
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKR 294

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYNA + GYC    + +A  LF+ M   G+ P+ + +N+L+   CK  ++ +A
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEA 354

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E+    +      + +   L+D    +G       L ++M       D+V YN+L
Sbjct: 355 MVLFKELC---NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+  C  G I  A      M+K+G  P+++TYN +++  C +  ++ A   +  + K+G+
Sbjct: 412 IDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGL 471

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y  +I G C    + +A      M  K+++P+   +N +IDG    G + +   
Sbjct: 472 EPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQE 531

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M   G S +V T+N L+ A  +      A SL ++ +++GI+PD +T + ++   C
Sbjct: 532 LLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQ-IVEGIWPDFYTNHAIVDNLC 590

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               + +A      +L  G +P++ TYT LI   C  G+  EA  + +K++      D I
Sbjct: 591 KGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAI 650

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLR 570
            F I+     +  E+DKA  + ++ + R
Sbjct: 651 TFEIIIGVLLQRNETDKAEKLREEMIAR 678



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 212/432 (49%), Gaps = 4/432 (0%)

Query: 107 TGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI 166
           T  VR  ++ D      +I  LC  G+I  A  +   M ++G  PD++T+N L+   C  
Sbjct: 254 TKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSR 313

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
            ++ +A  +   M +    P+   YN  I GYC+   +D+A+ LF  + N  + P   ++
Sbjct: 314 ENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASY 373

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           N L+  LC  G +    K L E+          DV+T  IL+D+  K G   +AL +   
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEM---HGSAQPPDVVTYNILIDALCKEGRILEALGVLVM 430

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +K ++ +IV YN +++G+CL  +++ A   F +M+K G  PD++ YN L+N  CK   
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEM 490

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           +DEA   +  +    + PD  SY ++I GLC  G I   +E L  M +    P+   +N+
Sbjct: 491 VDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNI 550

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           ++D + +      A S+   ++  G+  + +T +A++    +G  +  A    K +L+ G
Sbjct: 551 LLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG 609

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             P+V TY +LI A C  G    A+ L  +M      PD IT+  +I     R    +AE
Sbjct: 610 CSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAE 669

Query: 527 EVFAKIQTLGLA 538
           ++  ++   GL 
Sbjct: 670 KLREEMIARGLV 681



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 218/453 (48%), Gaps = 38/453 (8%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M++    P     + L+  + ++G    A  +  ++     SP+ AT+   I  Y   +
Sbjct: 45  RMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQS 104

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
               A  L +T+  +G +PN VT N +++  C  G++  A+ F   +LA        D  
Sbjct: 105 HTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG---YLFDQF 161

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   L++   KNG    AL L  +M + ++Q ++V Y+ LI+G C +G +S A     Q+
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221

Query: 323 LKRGFLPDVITYNTLLN-----------------------------------CLCKQGKL 347
            +RG L D +TYN+L++                                    LCK+G++
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI 281

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            EA     ++SK G  PD ++Y  +++G C   ++ +ARE    M+++ + P+   +NV+
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVL 341

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           IDGY +   +  A  +   + +  +   + ++N+LI      G I     L  EM     
Sbjct: 342 IDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ 401

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PDV TYN+LI A C  G I  AL +   M+++G+ P+I+TY  ++ G+C R N+  A++
Sbjct: 402 PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKD 461

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           +F ++   GL  D + + +L   Y + +  D+A
Sbjct: 462 IFNRMVKSGLEPDILNYNVLINGYCKTEMVDEA 494



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 159/305 (52%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+ +  + G    A++L+  +  K I   I  + +LIN +      + AF+    +LK G
Sbjct: 61  LLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSG 120

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           + P+++T+NT++N  C  G + +A  F   L   G   DQ +Y T+I GL  +G I  A 
Sbjct: 121 YQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAAL 180

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             L  M + SV P   +++ +IDG  + G +S+A  +   +   G+  +  T+N+LI   
Sbjct: 181 HLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGC 240

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G   +   L  +M+ + + PD +T+N+LI A C  G I  A  +   M +RG  PDI
Sbjct: 241 CSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDI 300

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +TY  L++G+C+R N+ EA E+F ++   GL  D + + +L   Y + K  D+A  + ++
Sbjct: 301 VTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKE 360

Query: 567 WLLRN 571
              +N
Sbjct: 361 LCNKN 365


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 217/427 (50%), Gaps = 3/427 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+ +G +PDV+T++ ++  LCK   ++KA  V+  M +    P+C TYN+ + GYC   
Sbjct: 226 EMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 285

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +  +A+     M ++G+ PN VT++ L++ LCK G   +A K    +          D+ 
Sbjct: 286 QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG---LEPDIA 342

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   L+  Y   G   +  AL + M +  IQ D   +N+LI  +     +  A   F +M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            + G  P+V+ Y T+++ LCK G +D+A  ++  +   G+ P+ I Y ++I GLC     
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA E +L ML++ +      +N IID + + G +  +  + DLM+  GV  ++ T+N L
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 522

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I      G + +A  L   M+  G+ PD+ TY  LI   C +  +  AL L+ EM+  G+
Sbjct: 523 IDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGV 582

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
           +P+IITY  +++G         A+E++  I   G  ++   + I+     +   +D+A  
Sbjct: 583 SPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALR 642

Query: 563 IHQKWLL 569
           + Q   L
Sbjct: 643 MFQNLCL 649



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 223/471 (47%), Gaps = 42/471 (8%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHVIREMSEMRPSPN 187
           C  G++         +++KG   D +T   L+  LC       A D V+R M+E+   P+
Sbjct: 103 CRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPD 162

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANN---GIRPNRVTHNILVHALCKKGLLGDAVK 244
             +YN  + G C  N   +AL L   MA++   G  P+ V++N +++   K+G    A  
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYS 222

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              E+L   D     DV+T + ++ +  K     +A+ + N M +  +  D + YN +++
Sbjct: 223 TYHEML---DRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 279

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G+C +G    A     +M   G  P+V+TY++L+N LCK G+  EA   +  ++K G+ P
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 339

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D  +Y+T++QG    G +V+    L  M+   + P+ H++N++I  Y +   +  A  + 
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY---------- 474
             M   G++ NV  +  +I    + GS+ DA    ++M+ +G+ P++  Y          
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTC 459

Query: 475 -------------------------NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
                                    N +I + C  G +  + +L+D M+R G+ PDIITY
Sbjct: 460 DKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 519

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
             LI G C  G M EA ++ A + ++G+  D + +  L   Y R+   D A
Sbjct: 520 NTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDA 570



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 202/417 (48%), Gaps = 4/417 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P V T+  L+   C+ G L+     +  + +     +  T+   + G C       A+ +
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 211 -FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
               M   G  P+  ++N L+  LC +    +A++ L  +  D  G +  DV++   +++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
            +FK GD  +A + +++M  + I  D+V Y+ +I   C    +  A      M+K G +P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           D +TYN++L+  C  G+  EA      +   GV P+ ++Y +++  LC +G   +AR+  
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
            SM ++ + P+   +  ++ GY   G L    ++ DLM+  G+  +   FN LI A  + 
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             +  A  +  +M   G+ P+V  Y  +I   C  G +  A+  +++M+  G+TP+II Y
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARDI 563
           T LI G C      +AEE+  ++   G+ ++ I F  +   +    R+ ES+K  D+
Sbjct: 450 TSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 506



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 209/465 (44%), Gaps = 41/465 (8%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           KE +  LK MR  G     +E +   + +++  LC  G+   A  +   M ++G  PD+ 
Sbjct: 288 KEAIGTLKKMRSDG-----VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  L+      G L +   ++  M      P+   +N  I  Y +  ++D+A+ +FS M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL------- 267
             +G+ PN V +  ++  LCK G + DA+ +  +++  D+G   + ++ ++++       
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI--DEGLTPNIIVYTSLIHGLCTCD 460

Query: 268 ---------------------------MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
                                      +DS+ K G   ++  L++ M +  ++ DI+ YN
Sbjct: 461 KWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYN 520

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G CL G +  A      M+  G  PD++TY TL+N  C+  ++D+A   +  +  +
Sbjct: 521 TLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 580

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GV+P+ I+Y  I+QGL        A+E  +S+ +     E   +N+I+ G  +      A
Sbjct: 581 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 640

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +   +    +     TFN +I A  + G + +A  L      +G+ PDV TY+L+   
Sbjct: 641 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
               G +     L+  M   G + D      +++    RG++  A
Sbjct: 701 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 151/317 (47%), Gaps = 4/317 (1%)

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           GK T  V T  IL+    + G      A   ++ +K  + D + +  L+ G C +   S 
Sbjct: 86  GKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSD 145

Query: 315 AFAYFCQ-MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT---GVAPDQISYK 370
           A     + M + G +PDV +YN LL  LC + +  EA     +++     G  PD +SY 
Sbjct: 146 AMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYN 205

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T++ G    GD  KA      ML++ ++P+   ++ II    +   +  A  + + M+  
Sbjct: 206 TVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN 265

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV  +  T+N+++      G   +A    K+M  DG+ P+V TY+ L+   C  G    A
Sbjct: 266 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 325

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
            +++D M +RG+ PDI TY  L++G+  +G + E   +   +   G+  DH  F IL   
Sbjct: 326 RKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICA 385

Query: 551 YRRMKESDKARDIHQKW 567
           Y + ++ D+A  +  K 
Sbjct: 386 YAKQEKVDQAMLVFSKM 402



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 138/287 (48%), Gaps = 3/287 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G++  +  L   M++ G  PD++T+N L++  C  G +++A  ++  M  +
Sbjct: 486 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV 545

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY   I GYCRV+ +D AL LF  M ++G+ PN +T+NI++  L        A
Sbjct: 546 GVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 605

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +    +          ++ T  I++    KN    +AL ++ ++   ++Q +   +N++
Sbjct: 606 KELYVSI---TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 662

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I      G +  A   F      G +PDV TY+ +   L +QG L+E    +  + + G 
Sbjct: 663 IGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 722

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           + D     +I++ L   GDI +A  +L  + EK    E    + +++
Sbjct: 723 SADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLE 769


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 189/357 (52%), Gaps = 5/357 (1%)

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           +EM      PN  TYN  I GYC++   D+A     +M   G+ PN +T N++++ LC+ 
Sbjct: 7   KEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRD 66

Query: 237 GLLGDAVKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
           G L +      EVL +   K    D +T   L++ Y K G+  QAL L  +M +  +  +
Sbjct: 67  GRLKET----SEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           +V Y  LIN  C  G+++ A  +F QM  RG  P+  TY T++N   +QG LDEA     
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            ++++G  P  ++Y  +I G C+ G + +A   L  M+ K V+P+   ++ II G+ R  
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
           +L  AF ++  M+   V  +  T+++LI        + +A  + +EML   + PD FTY 
Sbjct: 243 ELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYT 302

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            LI A C  G ++ AL L+DEM+++G  PD +TY  LI G   +   KEA  +  K+
Sbjct: 303 TLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL 359



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 214/439 (48%), Gaps = 22/439 (5%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C   +   A    R M  KG  P+++T N ++N LC+ G L++   V+ EMS  
Sbjct: 23  TMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRK 82

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  + GYC+     +AL L + M  NG+ PN VT+  L++++CK G L  A
Sbjct: 83  GYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRA 142

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++F  ++          +  T T +++ + + G   +A  + N+M +      IV YN L
Sbjct: 143 MEFFDQMHVRG---LCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNAL 199

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING C+ G +  A      M+ +G LPDV++Y+T+++   +  +LD A      +    V
Sbjct: 200 INGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSV 259

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y ++IQGLC    + +A +    ML   + P+   +  +I+ Y + GDL+ A  
Sbjct: 260 LPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALH 319

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M+  G   +  T+N LI    +     +A  L  ++  D   P   TYN LI   C
Sbjct: 320 LHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCC 379

Query: 483 NL---------------GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           N+               G +  A Q+++ M+ +   P+   Y  +I GHC  GN+ +A +
Sbjct: 380 NIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYK 439

Query: 528 VFAKIQTLGLAIDHIPFRI 546
           ++ ++    + +D +P  +
Sbjct: 440 LYKEM----VHVDFVPHTV 454



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 202/411 (49%), Gaps = 18/411 (4%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            L   ++M + G +P+V+T+N +++  CK+   ++A   +R M      PN  T+N  I 
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G CR   L +   +   M+  G  P+ VT+N LV+  CK+G    A+    E++ +    
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNG--- 118

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
            + +V+T T L++S  K G+  +A+  ++ M  + +  +   Y  +INGF   G +  A+
Sbjct: 119 LSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAY 178

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M + GF+P ++TYN L+N  C  G+++EA      +   GV PD +SY TII G 
Sbjct: 179 RVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGF 238

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
             + ++ +A +  + M+ KSV+P+   ++ +I G      L+ A  +   ML+  +  + 
Sbjct: 239 ARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDE 298

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           FT+  LI A  + G +  A  L  EM+  G  PD  TYN+LI           A +L  +
Sbjct: 299 FTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLK 358

Query: 497 MLRRGITPDIITYTELI---------------KGHCARGNMKEAEEVFAKI 532
           +      P  +TY  LI               KG C +G M EA++VF  +
Sbjct: 359 LFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESM 409



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 208/427 (48%), Gaps = 24/427 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++     +  +M +KG VPD +T+N LVN  CK G+  +A  +  EM    
Sbjct: 59  IINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNG 118

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SPN  TY + I   C+   L++A+  F  M   G+ PN  T+  +++   ++GLL +A 
Sbjct: 119 LSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAY 178

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E+           ++T   L++ +   G   +A+ L  DM  K +  D+V+Y+ +I
Sbjct: 179 RVLNEMTRSG---FIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTII 235

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GF  N ++  AF    +M+ +  LPD +TY++L+  LC+Q +L EA   +  +    + 
Sbjct: 236 SGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLP 295

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD+ +Y T+I   C  GD+ KA      M++K  +P+   +NV+I+G  +      A   
Sbjct: 296 PDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEA--- 352

Query: 424 RDLMLSFGVSSNV---FTFNALI-----------LAETRG----GSIFDAFSLKKEMLLD 465
           R L+L      ++    T+N LI           +A  +G    G + +A  + + M+  
Sbjct: 353 RRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINK 412

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
              P+   YN++I   C +G++  A +LY EM+     P  +T   L+K     G   E 
Sbjct: 413 NHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGEL 472

Query: 526 EEVFAKI 532
            EV   I
Sbjct: 473 NEVIGDI 479



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 167/311 (53%)

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +V+T   ++D Y K     +A      M  K ++ +++ +N++ING C +G +       
Sbjct: 17  NVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVL 76

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M ++G++PD +TYNTL+N  CK+G   +A   +  + + G++P+ ++Y ++I  +C  
Sbjct: 77  VEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKA 136

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G++ +A EF   M  + + P    +  II+G+ + G L  A+ + + M   G   ++ T+
Sbjct: 137 GNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTY 196

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           NALI      G + +A  L ++M+  G+ PDV +Y+ +I        +  A Q+  EM+ 
Sbjct: 197 NALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIG 256

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
           + + PD +TY+ LI+G C +  + EA ++F ++ T+ L  D   +  L   Y +  + +K
Sbjct: 257 KSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNK 316

Query: 560 ARDIHQKWLLR 570
           A  +H + + +
Sbjct: 317 ALHLHDEMIQK 327



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 197/427 (46%), Gaps = 24/427 (5%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR  L  +   + ++I  +C  G +  A+    +M  +G  P+  T+  ++N   + G L
Sbjct: 115 VRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLL 174

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  V+ EM+     P+  TYNA I G+C +  +++A+ L   M   G+ P+ V+++ +
Sbjct: 175 DEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTI 234

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKAT-SDVITSTILMDSYFKNGDKFQALALWNDMF 288
           +    +   L  A +   E++    GK+   D +T + L+    +     +A  ++ +M 
Sbjct: 235 ISGFARNQELDRAFQMKVEMI----GKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEML 290

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
              +  D   Y  LIN +C  GD++ A     +M+++GFLPD +TYN L+N L KQ +  
Sbjct: 291 TIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSK 350

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQ---------------GLCIHGDIVKAREFLLSML 393
           EA      L      P  ++Y T+I+               G C+ G + +A +   SM+
Sbjct: 351 EARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMI 410

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            K+  P   I+NVII G+ R G++  A+ +   M+      +  T  AL+ A    G   
Sbjct: 411 NKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDG 470

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +   +  ++L      D     +L+  +   G++ +   L  EM + G+ P   T T  I
Sbjct: 471 ELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGTPTNAI 530

Query: 514 KGHCARG 520
               ARG
Sbjct: 531 ----ARG 533



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           + L+ + EM R G  P+++TY  +I G+C    +K  +E F  ++++GL
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYC---KLKRTDEAFGFLRSMGL 46


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 208/400 (52%), Gaps = 3/400 (0%)

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           ++ G  PDV+T+N +++ LCK  ++++A+ V ++M E    PN  TYN  I G C+  E+
Sbjct: 217 LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEV 276

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D A  +F  M + G++P+ VT+N ++  LCK   +  A     +++   D     D +T 
Sbjct: 277 DMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMI---DRGVKPDHVTY 333

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
             ++D   K     +A  ++  M  K ++ D + Y ++I+G C    +  A   F QM+ 
Sbjct: 334 NTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMID 393

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           +G  P+  TYN L++     G+ +E       +S   + PD  +Y  ++  LC +G   +
Sbjct: 394 KGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNE 453

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           AR    SM+ K + P   I+ +++ GYG+ G LS    + +LM++ G+S N   FN +I 
Sbjct: 454 ARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVIC 513

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A  +   I +   +  +M   G+ P+V TY  LI A C LG +  A+  +++M+  G+TP
Sbjct: 514 AYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTP 573

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           + + +  L+ G C     ++ EE+F ++   G+  D + F
Sbjct: 574 NNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFF 613



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 234/494 (47%), Gaps = 73/494 (14%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC    +  A  + ++MI +G  PD +T+N +++ LCK   ++KA+ V ++M +  
Sbjct: 301 IIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKG 360

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY   I G C+   +D+A  +F  M + G++PN  T+N L+H     G   + V
Sbjct: 361 VKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVV 420

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + + E+ A D      DV T  +L+D   KNG   +A +L++ M +K I+  +  Y +++
Sbjct: 421 QRIKEMSAHD---LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIML 477

Query: 304 NGFCLNGDISS-------------------------AFA----------YFCQMLKRGFL 328
           +G+   G +S                          A+A           F +M ++G  
Sbjct: 478 HGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLS 537

Query: 329 PDVITYNTLLNCLCKQGKLDEA--------------------SHFYGVLS---------- 358
           P+V+TY TL++ LCK G++D+A                    S  YG+ +          
Sbjct: 538 PNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEEL 597

Query: 359 -----KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
                  G+ PD + + T++  LC  G +++AR  + SM+   + P+   +N +IDG+  
Sbjct: 598 FLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCF 657

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              +  A  + D M+S G+  N+ ++N L+    + G I +A+ L +EML  G+ P V T
Sbjct: 658 ASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVET 717

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN ++      G    A +LY  M++      I TY+ ++ G C      EA ++F  + 
Sbjct: 718 YNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLC 777

Query: 534 TLGLAIDHIPFRIL 547
           ++ L +D I F I+
Sbjct: 778 SMDLQLDIITFNIM 791



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 128/490 (26%), Positives = 221/490 (45%), Gaps = 38/490 (7%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   +  +I  LC   ++  A  + ++M++KG  P+ +T+N +++ LCK  +++ A+
Sbjct: 221 VSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAE 280

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V ++M +    P+  TYN  I G C+   +D+A  +F  M + G++P+ VT+N ++  L
Sbjct: 281 GVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGL 340

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   +  A     +++   D     D +T TI++D   K     +A  ++  M  K ++
Sbjct: 341 CKAQAIDKAEGVFQQMI---DKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVK 397

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +   YN LI+G+   G          +M      PDV TY  LL+ LCK GK +EA   
Sbjct: 398 PNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSL 457

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  + + G+ P    Y  ++ G    G + +  + L  M+   + P   I+N +I  Y +
Sbjct: 458 FDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAK 517

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF----------------- 456
              +     I   M   G+S NV T+  LI A  + G + DA                  
Sbjct: 518 RAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVV 577

Query: 457 ------------------SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
                              L  EML  GI PD+  +N ++   C  G +  A +L D M+
Sbjct: 578 FNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMV 637

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             G+ PD+I+Y  LI GHC    M EA ++   + + GL  + + +  L   Y +    D
Sbjct: 638 CMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRID 697

Query: 559 KARDIHQKWL 568
            A  + ++ L
Sbjct: 698 NAYCLFREML 707



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 210/447 (46%), Gaps = 10/447 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI-REMSEM 182
           VI   C  G++         +++ G   D +  N L+  LC    + +A HV+ R+M E+
Sbjct: 90  VIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEV 149

Query: 183 RPSPNCATYNAFITGYC---RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
                  +YN  + G C   R  E  + LH+     ++   P+ V++NI+++    +G +
Sbjct: 150 GCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQV 209

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
             A     E+        + DV+T   ++D   K  +  +A  ++  M +K ++ + V Y
Sbjct: 210 DKAYSLFLEM------GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTY 263

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N +I+G C   ++  A   F +M+ +G  P  +TYNT+++ LCK   +D A   +  +  
Sbjct: 264 NTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMID 323

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            GV PD ++Y TII GLC    I KA      M++K V P+   + +IIDG  +   +  
Sbjct: 324 RGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDR 383

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +   M+  GV  N  T+N LI      G   +     KEM    + PDVFTY LL+ 
Sbjct: 384 AEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLD 443

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C  G  + A  L+D M+R+GI P +  Y  ++ G+  +G + E  ++   +   G++ 
Sbjct: 444 YLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISP 503

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQK 566
           +H  F  +   Y +    D+   I  K
Sbjct: 504 NHRIFNTVICAYAKRAMIDEVMHIFIK 530



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/503 (24%), Positives = 219/503 (43%), Gaps = 67/503 (13%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D+  +  +I  LC    I  A  + ++MI KG  PD LT+  +++ LCK   +++A+
Sbjct: 326 VKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAE 385

Query: 174 HVIREMSEMRPSPNCATYNAFITGY----------------------------------- 198
            V ++M +    PN  TYN  I GY                                   
Sbjct: 386 GVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYL 445

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD------ 252
           C+  + ++A  LF +M   GI+P+   + I++H   KKG L +    L  ++A+      
Sbjct: 446 CKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNH 505

Query: 253 --------------------------DDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
                                          + +V+T   L+D+  K G    A+  +N 
Sbjct: 506 RIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQ 565

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M  + +  + V +N L+ G C           F +ML +G  PD++ +NT+L  LCK+G+
Sbjct: 566 MINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGR 625

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           + EA      +   G+ PD ISY T+I G C    + +A + L  M+   + P    +N 
Sbjct: 626 VMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNT 685

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           ++ GY + G + NA+ +   ML  GV+  V T+N ++    R G   +A  L   M+   
Sbjct: 686 LLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSR 745

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
               + TY++++   C       A +++  +    +  DIIT+  +I G    G  ++A 
Sbjct: 746 KLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAM 805

Query: 527 EVFAKIQTLGLAIDHIPFRILKK 549
           ++FA I   GL    + +R++ +
Sbjct: 806 DLFAAIPANGLVPSVVTYRLIAE 828



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 210/441 (47%), Gaps = 10/441 (2%)

Query: 124 VIRDLCLGGKIGTALW-LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++ LC   ++G A+  L R+M + G    V+++N L+  LC     E+A  ++  M + 
Sbjct: 125 LLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDG 184

Query: 183 RPS---PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
           + S   P+  +YN  I G+    ++DKA  LF  M   G+ P+ VT+N ++  LCK   +
Sbjct: 185 QDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEV 241

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
             A     +++  + G   ++V  +TI+ D   K  +   A  ++  M  K ++   V Y
Sbjct: 242 DRAEDVFQQMV--EKGVKPNNVTYNTII-DGLCKAQEVDMAEGVFQKMVDKGVKPSNVTY 298

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N +I+G C    +  A   F QM+ RG  PD +TYNT+++ LCK   +D+A   +  +  
Sbjct: 299 NTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMID 358

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            GV PD ++Y  II GLC    + +A      M++K V P    +N +I GY   G    
Sbjct: 359 KGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEE 418

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
                  M +  +  +VFT+  L+    + G   +A SL   M+  GI P V  Y +++ 
Sbjct: 419 VVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLH 478

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                G +     L + M+  GI+P+   +  +I  +  R  + E   +F K++  GL+ 
Sbjct: 479 GYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSP 538

Query: 540 DHIPFRILKKRYRRMKESDKA 560
           + + +  L     ++   D A
Sbjct: 539 NVVTYGTLIDALCKLGRVDDA 559



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 206/426 (48%), Gaps = 5/426 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE D   +  ++  LC  GK   A  L   MI+KG  P V  +  +++   K G L +  
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMH 490

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++  M     SPN   +N  I  Y +   +D+ +H+F  M   G+ PN VT+  L+ AL
Sbjct: 491 DLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDAL 550

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA-LWNDMFQKNI 292
           CK G + DAV    +++  ++G   ++V+ ++++        DK++ +  L+ +M  + I
Sbjct: 551 CKLGRVDDAVLQFNQMI--NEGVTPNNVVFNSLVYG--LCTVDKWEKVEELFLEMLNQGI 606

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           + DIV +N ++   C  G +  A      M+  G  PDVI+YNTL++  C   ++DEA  
Sbjct: 607 RPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVK 666

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               +   G+ P+ +SY T++ G C  G I  A      ML K V P    +N I++G  
Sbjct: 667 LLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLF 726

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           R G  S A  +   M+      ++ T++ ++    +     +AF + + +    +  D+ 
Sbjct: 727 RSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDII 786

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           T+N++I      G    A+ L+  +   G+ P ++TY  + +     G+++E + +F+ +
Sbjct: 787 TFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVM 846

Query: 533 QTLGLA 538
           +  G A
Sbjct: 847 EKSGTA 852



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 201/430 (46%), Gaps = 38/430 (8%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM Q+G  P+V+T+  L++ LCK+G ++ A     +M     +PN   +N+ + G C V+
Sbjct: 530 KMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVD 589

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           + +K   LF  M N GIRP+ V  N ++  LCK+G + +A + +  ++         DVI
Sbjct: 590 KWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVC---MGLKPDVI 646

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           +   L+D +       +A+ L + M    ++ +IV+YN L++G+C  G I +A+  F +M
Sbjct: 647 SYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREM 706

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L++G  P V TYNT+LN L + G+  EA   Y                          ++
Sbjct: 707 LRKGVTPGVETYNTILNGLFRSGRFSEARELY-------------------------VNM 741

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
           +K+R+ L S+           +++I+DG+ +      AF I   + S  +  ++ TFN +
Sbjct: 742 IKSRK-LWSIC---------TYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIM 791

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    +GG   DA  L   +  +G+ P V TY L+       G +     L+  M + G 
Sbjct: 792 IDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGT 851

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            P+      LI+    RG +  A    +K+     +++     +L   + R +    A+ 
Sbjct: 852 APNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKS 911

Query: 563 IHQKWLLRNK 572
           + +K    N+
Sbjct: 912 LPEKCRFFNE 921



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 143/290 (49%), Gaps = 3/290 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+ +LC  G++  A  L   M+  G  PDV+++N L++  C    +++A  ++  M    
Sbjct: 616 VLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAG 675

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  +YN  + GYC+   +D A  LF  M   G+ P   T+N +++ L + G   +A 
Sbjct: 676 LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAR 735

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +    ++     +    + T +I++D + KN    +A  ++  +   ++Q DI+ +N++I
Sbjct: 736 ELYVNMIKS---RKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMI 792

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G    G    A   F  +   G +P V+TY  +   L ++G L+E    + V+ K+G A
Sbjct: 793 DGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTA 852

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           P+      +I+ L   G+I +A  +L  + EK+   E    +++I  + R
Sbjct: 853 PNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSR 902



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 151/331 (45%), Gaps = 7/331 (2%)

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           AV     +L D   K   D  T +I++  + + G      A +  + +   + D +  N 
Sbjct: 65  AVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQ 124

Query: 302 LINGFCLNGDISSAFAYFC-QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL--- 357
           L+ G C    +  A      QM + G    V++YNTLL  LC + + +EA     ++   
Sbjct: 125 LLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDG 184

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
             +  +PD +SY  +I G    G + KA    L M    V P+   +N IIDG  +  ++
Sbjct: 185 QDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEV 241

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             A  +   M+  GV  N  T+N +I    +   +  A  + ++M+  G+ P   TYN +
Sbjct: 242 DRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTI 301

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I   C    +  A  ++ +M+ RG+ PD +TY  +I G C    + +AE VF ++   G+
Sbjct: 302 IDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGV 361

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             D++ + I+     + +  D+A  + Q+ +
Sbjct: 362 KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMI 392



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 45/298 (15%)

Query: 280 ALALWNDMFQ---KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
           A++ +N M +     +  D   Y+++I  FC  G +   FA F  +LK G+  D I  N 
Sbjct: 65  AVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQ 124

Query: 337 LLNCLCKQGKLDEASH-FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE- 394
           LL  LC   ++ EA H     + + G     +SY T+++GLC      +ARE L  M++ 
Sbjct: 125 LLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDG 184

Query: 395 --KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
              S  P+   +N++I+G+                           FN         G +
Sbjct: 185 QDSSCSPDVVSYNIVINGF---------------------------FNE--------GQV 209

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             A+SL  EM   G+ PDV TYN +I   C    +  A  ++ +M+ +G+ P+ +TY  +
Sbjct: 210 DKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTI 266

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           I G C    +  AE VF K+   G+   ++ +  +     + +  D+A  + Q+ + R
Sbjct: 267 IDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDR 324



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 112/237 (47%), Gaps = 3/237 (1%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
           G V   L+ +   +  ++   C  G+I  A  L R+M++KG  P V T+N ++N L + G
Sbjct: 670 GMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSG 729

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
              +A  +   M + R   +  TY+  + G+C+ N  D+A  +F ++ +  ++ + +T N
Sbjct: 730 RFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFN 789

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           I++  L K G   DA+     + A+        V+T  ++ ++  + G   +   L++ M
Sbjct: 790 IMIDGLFKGGRKEDAMDLFAAIPANG---LVPSVVTYRLIAENLIEEGSLEELDCLFSVM 846

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
            +     +    N LI      G+I  A AY  ++ ++ F  +  T + L++   ++
Sbjct: 847 EKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSRE 903


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 217/427 (50%), Gaps = 3/427 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+ +G +PDV+T++ ++  LCK   ++KA  V+  M +    P+C TYN+ + GYC   
Sbjct: 226 EMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 285

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +  +A+     M ++G+ PN VT++ L++ LCK G   +A K    +          D+ 
Sbjct: 286 QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG---LEPDIA 342

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   L+  Y   G   +  AL + M +  IQ D   +N+LI  +     +  A   F +M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            + G  P+V+ Y T+++ LCK G +D+A  ++  +   G+ P+ I Y ++I GLC     
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA E +L ML++ +      +N IID + + G +  +  + DLM+  GV  ++ T+N L
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 522

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I      G + +A  L   M+  G+ PD+ TY  LI   C +  +  AL L+ EM+  G+
Sbjct: 523 IDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGV 582

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
           +P+IITY  +++G         A+E++  I   G  ++   + I+     +   +D+A  
Sbjct: 583 SPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALR 642

Query: 563 IHQKWLL 569
           + Q   L
Sbjct: 643 MFQNLCL 649



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 223/471 (47%), Gaps = 42/471 (8%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHVIREMSEMRPSPN 187
           C  G++         +++KG   D +T   L+  LC       A D V+R M+E+   P+
Sbjct: 103 CRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPD 162

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANN---GIRPNRVTHNILVHALCKKGLLGDAVK 244
             +YN  + G C  N   +AL L   MA++   G  P+ V++N +++   K+G    A  
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYS 222

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              E+L   D     DV+T + ++ +  K     +A+ + N M +  +  D + YN +++
Sbjct: 223 TYHEML---DRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 279

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G+C +G    A     +M   G  P+V+TY++L+N LCK G+  EA   +  ++K G+ P
Sbjct: 280 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 339

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D  +Y+T++QG    G +V+    L  M+   + P+ H++N++I  Y +   +  A  + 
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY---------- 474
             M   G++ NV  +  +I    + GS+ DA    ++M+ +G+ P++  Y          
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTC 459

Query: 475 -------------------------NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
                                    N +I + C  G +  + +L+D M+R G+ PDIITY
Sbjct: 460 DKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 519

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
             LI G C  G M EA ++ A + ++G+  D + +  L   Y R+   D A
Sbjct: 520 NTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDA 570



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 202/418 (48%), Gaps = 4/418 (0%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P V T+  L+   C+ G L+     +  + +     +  T+   + G C       A+ 
Sbjct: 89  TPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMD 148

Query: 210 L-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           +    M   G  P+  ++N L+  LC +    +A++ L  +  D  G +  DV++   ++
Sbjct: 149 IVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           + +FK GD  +A + +++M  + I  D+V Y+ +I   C    +  A      M+K G +
Sbjct: 209 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM 268

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           PD +TYN++L+  C  G+  EA      +   GV P+ ++Y +++  LC +G   +AR+ 
Sbjct: 269 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKI 328

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
             SM ++ + P+   +  ++ GY   G L    ++ DLM+  G+  +   FN LI A  +
Sbjct: 329 FDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAK 388

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
              +  A  +  +M   G+ P+V  Y  +I   C  G +  A+  +++M+  G+TP+II 
Sbjct: 389 QEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIV 448

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARDI 563
           YT LI G C      +AEE+  ++   G+ ++ I F  +   +    R+ ES+K  D+
Sbjct: 449 YTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 506



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 209/465 (44%), Gaps = 41/465 (8%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           KE +  LK MR  G     +E +   + +++  LC  G+   A  +   M ++G  PD+ 
Sbjct: 288 KEAIGTLKKMRSDG-----VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  L+      G L +   ++  M      P+   +N  I  Y +  ++D+A+ +FS M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL------- 267
             +G+ PN V +  ++  LCK G + DA+ +  +++  D+G   + ++ ++++       
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI--DEGLTPNIIVYTSLIHGLCTCD 460

Query: 268 ---------------------------MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
                                      +DS+ K G   ++  L++ M +  ++ DI+ YN
Sbjct: 461 KWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYN 520

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G CL G +  A      M+  G  PD++TY TL+N  C+  ++D+A   +  +  +
Sbjct: 521 TLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS 580

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GV+P+ I+Y  I+QGL        A+E  +S+ +     E   +N+I+ G  +      A
Sbjct: 581 GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA 640

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +   +    +     TFN +I A  + G + +A  L      +G+ PDV TY+L+   
Sbjct: 641 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
               G +     L+  M   G + D      +++    RG++  A
Sbjct: 701 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 151/316 (47%), Gaps = 4/316 (1%)

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           GK T  V T  IL+    + G      A   ++ +K  + D + +  L+ G C +   S 
Sbjct: 86  GKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSD 145

Query: 315 AFAYFCQ-MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK---TGVAPDQISYK 370
           A     + M + G +PDV +YN LL  LC + +  EA     +++     G  PD +SY 
Sbjct: 146 AMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYN 205

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T++ G    GD  KA      ML++ ++P+   ++ II    +   +  A  + + M+  
Sbjct: 206 TVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN 265

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV  +  T+N+++      G   +A    K+M  DG+ P+V TY+ L+   C  G    A
Sbjct: 266 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 325

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
            +++D M +RG+ PDI TY  L++G+  +G + E   +   +   G+  DH  F IL   
Sbjct: 326 RKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICA 385

Query: 551 YRRMKESDKARDIHQK 566
           Y + ++ D+A  +  K
Sbjct: 386 YAKQEKVDQAMLVFSK 401



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 133/273 (48%), Gaps = 3/273 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G++  +  L   M++ G  PD++T+N L++  C  G +++A  ++  M  +
Sbjct: 486 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV 545

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY   I GYCRV+ +D AL LF  M ++G+ PN +T+NI++  L        A
Sbjct: 546 GVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 605

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +    +          ++ T  I++    KN    +AL ++ ++   ++Q +   +N++
Sbjct: 606 KELYVSITKSG---TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 662

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I      G +  A   F      G +PDV TY+ +   L +QG L+E    +  + + G 
Sbjct: 663 IGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 722

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           + D     +I++ L   GDI +A  +L  + EK
Sbjct: 723 SADSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 755


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 222/456 (48%), Gaps = 38/456 (8%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D      +IR + + GKIG AL L  KMI +G  PDV+T+  L+N LCK+G+   A  
Sbjct: 128 QPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIR 187

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++  M +    PN   YN  I   C+  ++ +A +LFS M   GI P+  T+N L+HALC
Sbjct: 188 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 247

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
                      L E++   D K   DV++   ++D+  K G   +A  + + M Q+ ++ 
Sbjct: 248 NLCEWKHVATLLNEMV---DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEP 304

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++V Y  L++G CL  ++  A   F  M+ +G +P+VI+YNTL+N  CK  ++D+A + +
Sbjct: 305 NVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLF 364

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
           G + +  + PD ++Y T+I GLC    +  A      M+  S +P    + +++D     
Sbjct: 365 GEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD----- 419

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
                            +  N +   A+ L +   GS  D              PD+   
Sbjct: 420 ----------------YLCKNRYLAEAMALLKAIEGSNLD--------------PDIQVN 449

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N+ I   C  G +  A  L+  +  +G+ PD+ TY+ +I G C RG + EA ++F ++  
Sbjct: 450 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 509

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            G  ++   +  + + + R  E+ +A  + Q+ + R
Sbjct: 510 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVAR 545



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 195/403 (48%), Gaps = 8/403 (1%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           L+HN   ++      ++ A      M  M+P P+   +N  +T   ++      L L   
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M + GI PN  T +IL+++ C    +G A   L ++L         D  T T L+   + 
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGH---QPDTATFTTLIRGIYV 143

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +AL L++ M  +  + D+V Y  LING C  G+ S+A      M+++   P+V  
Sbjct: 144 EGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA 203

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YNT+++ LCK  ++ EA + +  +   G++PD  +Y ++I  LC   +       L  M+
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           +  ++P+   +N ++D   + G ++ A  + D M+  GV  NV T+ AL+        + 
Sbjct: 264 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMD 323

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  +   M+  G  P+V +YN LI   C +  I  A+ L+ EM R+ + PD +TY+ LI
Sbjct: 324 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLI 383

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL-----KKRY 551
            G C    +++A  +F ++       + + +RIL     K RY
Sbjct: 384 HGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRY 426



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 196/421 (46%), Gaps = 3/421 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M++    P  +  N L+  + K+        +  +M      PN  T +  I  +C +N
Sbjct: 51  RMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLN 110

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            +  A  + + +   G +P+  T   L+  +  +G +G+A+    +++ +       DV+
Sbjct: 111 RVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG---FRPDVV 167

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   L++   K G+   A+ L   M QKN Q ++ AYN +I+  C +  ++ AF  F +M
Sbjct: 168 TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 227

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           + +G  PD+ TYN+L++ LC   +    +     +  + + PD +S+ T++  LC  G +
Sbjct: 228 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 287

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A + +  M+++ V P    +  ++DG+    ++  A  + D M+  G   NV ++N L
Sbjct: 288 TEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTL 347

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    +   I  A  L  EM    + PD  TY+ LI   C++  +  A+ L+ EM+    
Sbjct: 348 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 407

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            P+++TY  L+   C    + EA  +   I+   L  D     I      R  E + ARD
Sbjct: 408 IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARD 467

Query: 563 I 563
           +
Sbjct: 468 L 468



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 142/316 (44%), Gaps = 35/316 (11%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A++ +N M +       V +N L+         S+  +   QM   G  P++ T + L+N
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C   ++  A      + K G  PD  ++ T+I+G+ + G I +A      M+ +   P
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRP 164

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   +  +I+G  + G+ S A  +   M+      NVF +N +I +  +   + +AF+L 
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNL----------------------------------- 484
            EM+  GI PD+FTYN LI A CNL                                   
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G +  A  + D+M++RG+ P+++TYT L+ GHC    M EA +VF  +   G   + I +
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344

Query: 545 RILKKRYRRMKESDKA 560
             L   Y +++  DKA
Sbjct: 345 NTLINGYCKIQRIDKA 360



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 151/332 (45%), Gaps = 15/332 (4%)

Query: 52  TLNDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAV-FNAL-DLILKENL-----DRLKTM 104
           T N ++  + + C  K      N+  D++  P  V FN + D + KE       D +  M
Sbjct: 238 TYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKM 297

Query: 105 RDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC 164
              G     +E +   + A++   CL  ++  A+ +   M+ KG +P+V+++N L+N  C
Sbjct: 298 IQRG-----VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYC 352

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           KI  ++KA ++  EM      P+  TY+  I G C V  L  A+ LF  M      PN V
Sbjct: 353 KIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLV 412

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           T+ IL+  LCK   L +A+  L  +   +      D+  + I +D   + G+   A  L+
Sbjct: 413 TYRILLDYLCKNRYLAEAMALLKAI---EGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 469

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           +++  K +Q D+  Y+++ING C  G +  A   F +M + G   +   YNT+     + 
Sbjct: 470 SNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRN 529

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            +   A      +   G + D  +    ++ L
Sbjct: 530 NETSRAIQLLQEMVARGFSADASTMTLFVKML 561



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 105/259 (40%)

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I  A + F +ML+    P  + +N LL  + K             +   G+ P+  +   
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I   C    +  A   L  +L+    P+   +  +I G    G +  A  + D M+  G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              +V T+  LI    + G+   A  L   M+     P+VF YN +I + C    +  A 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            L+ EM+ +GI+PDI TY  LI   C     K    +  ++    +  D + F  +    
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 552 RRMKESDKARDIHQKWLLR 570
            +  +  +A D+  K + R
Sbjct: 282 CKEGKVTEAHDVVDKMIQR 300



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 60/125 (48%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D + +   I  +C  G++  A  L   +  KG  PDV T++ ++N LC+ G L++A 
Sbjct: 442 LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEAS 501

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + REM E   + N   YN    G+ R NE  +A+ L   M   G   +  T  + V  L
Sbjct: 502 KLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 561

Query: 234 CKKGL 238
              GL
Sbjct: 562 SDDGL 566


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 216/433 (49%), Gaps = 4/433 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G    A+ L  +M+ K      +T+N +   LCK G++E+A+ ++ EM     + + 
Sbjct: 347 CRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHS 406

Query: 189 ATYNAFITGYC-RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             +N+ + G   R   L+  + L S M   G++PN          LC+     +AV    
Sbjct: 407 GLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWL 466

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           ++L   +     ++ TS  L+    +  +   A  +   M  K ++ D + YN++I G C
Sbjct: 467 KML---EKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCC 523

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            +  I  A      M+++GF PD   +N++++  C  GK++EA H  G +   GV PD +
Sbjct: 524 KDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVV 583

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           SY TII G C   DI KA E+L  ++   + P   I+N +I GYGR G++S A  + D M
Sbjct: 584 SYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTM 643

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
            S G+     T+ +L+      G + +A ++ ++   + I   V  Y ++I   C +G +
Sbjct: 644 ESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKM 703

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A+  ++EM  R I P+ ITYT L+  +C  GN +EA ++F ++ + G+  D++ +  L
Sbjct: 704 DEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTL 763

Query: 548 KKRYRRMKESDKA 560
              + ++   DKA
Sbjct: 764 VTGFSQVDSLDKA 776



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 205/444 (46%), Gaps = 2/444 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  G++  A+ L+ +M +    P ++T   L+N L +     +   ++REM  +  +PN
Sbjct: 276 LCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPN 335

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
               N  I  +CR     +A+ LF  M +  ++   VT+N++  ALCK+G +  A + L 
Sbjct: 336 EVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILE 395

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E+L+   G      + ++++     + G     + L ++M ++ ++ +           C
Sbjct: 396 EMLST--GMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLC 453

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
                  A   + +ML++G   ++ T N L++ LC+   +  A+     +   G+  D I
Sbjct: 454 QGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNI 513

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y  +IQG C    I +A +    M+ K   P+ +++N II  Y   G +  A  +   M
Sbjct: 514 TYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQM 573

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              GV  +V ++  +I    +   I  A     E++  G+ P+   YN LIG     G+I
Sbjct: 574 KIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNI 633

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A+ + D M   GI P  +TY  L+   C  G + EA+ +F + +   + +  + + I+
Sbjct: 634 SGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIM 693

Query: 548 KKRYRRMKESDKARDIHQKWLLRN 571
            +   ++ + D+A +  ++   R+
Sbjct: 694 IQGLCKIGKMDEAMNYFEEMRSRS 717



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 197/417 (47%), Gaps = 9/417 (2%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP-SPNCATYNAFITGYCRVNELDKALH 209
           P V T N L+  L + G+L     V  EM + +  +PN  +Y + I   C+V ++D    
Sbjct: 191 PSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFK 250

Query: 210 LFSTMANNGIRPN--RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + S + + G++ +   V +N+L+ ALCK G + +A++  G +   ++ +    ++T  IL
Sbjct: 251 ILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRM---EESRVAPSMVTFGIL 307

Query: 268 MDSYFKNGDKFQAL-ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           ++   K  D+F  + AL  +M    I  + V  N LI+  C  G  + A   F +M+ + 
Sbjct: 308 ING-LKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKE 366

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH-GDIVKA 385
                +TYN +   LCK+G+++ A      +  TG+      + +++ GL    G +   
Sbjct: 367 MKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESV 426

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
              +  M+++ + P   +         +      A  I   ML  G+  N+ T NALI  
Sbjct: 427 VRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHG 486

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
              G ++  A  + + M+  G+  D  TYN++I   C    I  AL+L D+M+R+G  PD
Sbjct: 487 LCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPD 546

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
              +  +I  +C  G M+EA  +  +++  G+  D + +  +   Y + K+  KA +
Sbjct: 547 AYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANE 603



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 206/435 (47%), Gaps = 7/435 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREM-- 179
           A++  L   G +G    +  +M    TV P+  ++  ++  LCK+G ++    ++ ++  
Sbjct: 198 ALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIH 257

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
           + ++ S     YN  +   C+   +D+A+ L   M  + + P+ VT  IL++ L +    
Sbjct: 258 AGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRF 317

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           G+    L E+  +  G   ++VI +  L+D + + G   +A+ L+++M  K +++  V Y
Sbjct: 318 GEVGALLREM--EGLGITPNEVICNE-LIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTY 374

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ-GKLDEASHFYGVLS 358
           N++    C  G++  A     +ML  G       +N+++  L ++ G+L+        + 
Sbjct: 375 NLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMV 434

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           K G+ P+        + LC      +A    L MLEK +       N +I G     ++ 
Sbjct: 435 KRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMK 494

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   M++ G+  +  T+N +I    +   I +A  L+ +M+  G  PD + +N +I
Sbjct: 495 GATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSII 554

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            A C+LG +  AL L  +M   G+ PD+++Y  +I G+C   ++++A E   ++   GL 
Sbjct: 555 HAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLK 614

Query: 539 IDHIPFRILKKRYRR 553
            + + +  L   Y R
Sbjct: 615 PNAVIYNALIGGYGR 629



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 167/341 (48%), Gaps = 3/341 (0%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
            A  + LC G +   A+ +  KM++KG   ++ T N L++ LC+  +++ A  V+R M  
Sbjct: 446 TACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVN 505

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
                +  TYN  I G C+ +++++AL L   M   G +P+    N ++HA C  G + +
Sbjct: 506 KGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEE 565

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+  LG++  +       DV++   ++D Y K  D  +A    N++    ++ + V YN 
Sbjct: 566 ALHLLGQMKIEG---VQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNA 622

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LI G+  NG+IS A      M   G  P  +TY +L++ +C  G +DEA   +    K  
Sbjct: 623 LIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNS 682

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           +    + Y  +IQGLC  G + +A  +   M  +S+ P    +  ++  Y + G+   A 
Sbjct: 683 IEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEAS 742

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            + D M+S G+  +  ++N L+   ++  S+  A     E+
Sbjct: 743 KLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEI 783



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 144/294 (48%), Gaps = 8/294 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           +K   + L+TM + G     +E D   +  +I+  C   KI  AL LR  MI+KG  PD 
Sbjct: 493 MKGATEVLRTMVNKG-----MELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDA 547

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
              N +++  C +G +E+A H++ +M      P+  +Y   I GYC+  ++ KA    + 
Sbjct: 548 YMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNE 607

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           +   G++PN V +N L+    + G +  A+  L  +  +  G   ++V T   LM     
Sbjct: 608 LMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTM--ESIGIQPTNV-TYCSLMHWMCH 664

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +A  ++    + +I+  +V Y ++I G C  G +  A  YF +M  R   P+ IT
Sbjct: 665 AGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKIT 724

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           Y TL+   CK G  +EAS  +  +  +G+ PD +SY T++ G      + KA E
Sbjct: 725 YTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIE 778



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 108/236 (45%), Gaps = 9/236 (3%)

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS--KTGVAPDQI 367
           G +  A   F  +  R   P V T N LL  L + G L      +  +   KT V P+  
Sbjct: 172 GSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKT-VTPNGY 230

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSM----LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           SY ++I+ LC  G +    + L  +    L++S    P  +N+++D   + G +  A  +
Sbjct: 231 SYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVP--YNLLMDALCKSGRVDEAIRL 288

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
           +  M    V+ ++ TF  LI    R     +  +L +EM   GI P+    N LI   C 
Sbjct: 289 KGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCR 348

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
            GH   A++L+DEM+ + +    +TY  + +  C  G M+ AE +  ++ + G+ I
Sbjct: 349 KGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTI 404


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 213/432 (49%), Gaps = 4/432 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G    AL L  +M+ KG    V+T+N +   LCK G++E A+ ++ EM       +C
Sbjct: 327 CRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHC 386

Query: 189 ATYNAFITGYCR-VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
           + +N+ +  + R    LD  L L   M    ++PN       +  LCK G   +A +   
Sbjct: 387 SLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWF 446

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           +VL    G    +V TS  L+    +  +  +A  +   M    ++ D + YN++I G C
Sbjct: 447 QVLGKGLG---VNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCC 503

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
               +  A      M+KRGF PD+ T+N  L+  C  GK++E  H    +   G+ PD +
Sbjct: 504 KASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIV 563

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y TII G C   D+ KA E+L  +++  + P   I+N +I GYGR G++S+A  I D M
Sbjct: 564 TYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTM 623

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              G+     T+N+L+      G + +  ++  + ++  I   V  Y ++I   C +G I
Sbjct: 624 KYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKI 683

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A+  + EM  RGI P+ +TYT L+  +   GN +EA ++F ++ +LG+  D + +  L
Sbjct: 684 DEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTL 743

Query: 548 KKRYRRMKESDK 559
              +  +   DK
Sbjct: 744 ISGFCEVDSLDK 755



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 203/419 (48%), Gaps = 7/419 (1%)

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP-SPNCATYNAFITGYCRVNELD 205
           +G  P + T + LV  L   G L+ A  V  EM + +  +P+  TY A I   CR  E+D
Sbjct: 169 RGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEID 228

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
            A  + + +  +GI+P  VT+N+L+ ALCK G + +A +  G ++   +G+    ++T  
Sbjct: 229 AAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV---EGRVRPSIVTFG 285

Query: 266 ILMDSYFKNGDKFQAL-ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           IL+ S    G +F  + A+  +M    I  + V YN +I   C  G  S A   F +M+ 
Sbjct: 286 ILI-SGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVS 344

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ-GLCIHGDIV 383
           +G    V+TYN +   LCK+G+++ A      +   G+      + +++   L   G + 
Sbjct: 345 KGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLD 404

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
                +  ML + + P   +    I    + G    A  I   +L  G+  NV T NALI
Sbjct: 405 LVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALI 464

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               +G ++ +A  + K M+  G+  D  TYN++I   C    +  A+QL D+M++RG  
Sbjct: 465 HGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFK 524

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
           PD+ T+   +  +C  G ++E   +  ++++ GL  D + +  +   Y + K+  KA +
Sbjct: 525 PDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANE 583



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 185/396 (46%), Gaps = 7/396 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++   L L R+M+ +   P+       + ELCK G  E+A  +  ++       N AT 
Sbjct: 401 GRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATS 460

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           NA I G C+ N + +A  +   M N+G+  +R+T+NI++   CK   + +A++     L 
Sbjct: 461 NALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQ-----LR 515

Query: 252 DDDGKA--TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           DD  K     D+ T  I + +Y   G   + L L + M  + ++ DIV Y  +I+G+C  
Sbjct: 516 DDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKA 575

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
            D+  A  Y  +++K G  P+ + YN L+    + G + +A      +   G+ P  ++Y
Sbjct: 576 KDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTY 635

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            +++  +C  G + + +      + K +      + +II G+ + G +  A      M S
Sbjct: 636 NSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHS 695

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+  N  T+  L+ A ++ G+  +A  L  EM+  GI PD  +YN LI   C +  +  
Sbjct: 696 RGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDK 755

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            ++   EM  + +  D  +Y   + G       KEA
Sbjct: 756 MVESPAEMSSQVLKQDGCSYNAFVDGITTPWCQKEA 791



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 155/317 (48%), Gaps = 8/317 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           +KE    LK M ++G     +E D   +  +I+  C   K+  A+ LR  MI++G  PD+
Sbjct: 473 MKEATKVLKAMVNSG-----VELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDL 527

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T N  ++  C +G +E+  H++ +M      P+  TY   I GYC+  ++ KA    + 
Sbjct: 528 FTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTE 587

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           +  NG+RPN V +N L+    + G + DA+  L + +  +  + T   +T   LM     
Sbjct: 588 LMKNGLRPNAVIYNALIGGYGRNGNISDAIGIL-DTMKYNGIQPTP--VTYNSLMYWMCH 644

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +  A++     K+I+  ++ Y ++I GFC  G I  A  YF +M  RG  P+ +T
Sbjct: 645 AGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMT 704

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y TL+    K G  +EAS  +  +   G+ PD +SY T+I G C    + K  E    M 
Sbjct: 705 YTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMS 764

Query: 394 EKSVVPEPHIWNVIIDG 410
            + +  +   +N  +DG
Sbjct: 765 SQVLKQDGCSYNAFVDG 781



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 166/356 (46%), Gaps = 3/356 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A I++LC  GK   A  +  +++ KG   +V T N L++ LC+  ++++A  V++ M   
Sbjct: 427 ACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNS 486

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +  TYN  I G C+ +++D+A+ L   M   G +P+  T NI +H  C  G + + 
Sbjct: 487 GVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEI 546

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  L ++ ++       D++T   ++D Y K  D  +A     ++ +  ++ + V YN L
Sbjct: 547 LHLLDQMKSEG---LKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNAL 603

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G+  NG+IS A      M   G  P  +TYN+L+  +C  G ++E    +       +
Sbjct: 604 IGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDI 663

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
               I Y  IIQG C  G I +A  +   M  + + P    +  ++  Y + G+   A  
Sbjct: 664 ELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASK 723

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           + D M+S G+  +  ++N LI       S+        EM    +  D  +YN  +
Sbjct: 724 LFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFV 779



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 193/460 (41%), Gaps = 77/460 (16%)

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN---------- 216
           G L +A     E+S    SP+  T +  +       +LD A  +F  M +          
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213

Query: 217 --------------------------NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
                                     +GI+P  VT+N+L+ ALCK G + +A +  G ++
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQAL-ALWNDMFQKNIQTDIVAYNVLINGFCLN 309
              +G+    ++T  IL+ S    G +F  + A+  +M    I  + V YN +I   C  
Sbjct: 274 ---EGRVRPSIVTFGILI-SGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRK 329

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA----------------SHF 353
           G  S A   F +M+ +G    V+TYN +   LCK+G+++ A                S F
Sbjct: 330 GHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLF 389

Query: 354 YGV----LSKTG----------------VAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
             V    L  TG                + P+       IQ LC  G   +A E    +L
Sbjct: 390 NSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVL 449

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            K +       N +I G  +  ++  A  +   M++ GV  +  T+N +I    +   + 
Sbjct: 450 GKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMD 509

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L+ +M+  G  PD+FT+N+ +   CNLG +   L L D+M   G+ PDI+TY  +I
Sbjct: 510 EAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTII 569

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
            G+C   +M +A E   ++   GL  + + +  L   Y R
Sbjct: 570 DGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGR 609



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 172/364 (47%), Gaps = 8/364 (2%)

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS-DVI 262
           L +A   F  ++  G  P+  T +ILV AL   G L  A K  GE+    DGK  + DV 
Sbjct: 156 LSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEM---RDGKTVAPDVH 212

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T T ++ +  + G+   A A+  ++ +  IQ  +V YNVL++  C +G +  AF    +M
Sbjct: 213 TYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 272

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           ++    P ++T+  L++ L +  +  E       +   G+ P+++ Y  +I   C  G  
Sbjct: 273 VEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHC 332

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A +    M+ K +      +N+I     + G++ +A  I D ML  G+  +   FN++
Sbjct: 333 SEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSV 392

Query: 443 ILAETRGGSIFD-AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +    RG    D    L +EML   + P+       I   C  G    A +++ ++L +G
Sbjct: 393 VAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKG 452

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKESD 558
           +  ++ T   LI G C   NMKEA +V   +   G+ +D I + I+ +   +  +M E+ 
Sbjct: 453 LGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAI 512

Query: 559 KARD 562
           + RD
Sbjct: 513 QLRD 516



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 121/239 (50%), Gaps = 7/239 (2%)

Query: 307 CLN----GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL--SKT 360
           CLN    G +S A   F ++  RG  P + T + L+  L   G+LD A   +G +   KT
Sbjct: 147 CLNSPAPGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKT 206

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            VAPD  +Y  +I+ LC  G+I  A   L  +    + P    +NV++D   + G +  A
Sbjct: 207 -VAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEA 265

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           F ++  M+   V  ++ TF  LI    RG    +  ++ +EM   GI P+   YN +IG 
Sbjct: 266 FRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGW 325

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
            C  GH   AL+L+DEM+ +GI   ++TY  + K  C  G M+ AE++  ++   G+ +
Sbjct: 326 HCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMV 384



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 3/248 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  GK+   L L  +M  +G  PD++T+  +++  CK  D+ KA+  + E+ +    PN 
Sbjct: 538 CNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNA 597

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             YNA I GY R   +  A+ +  TM  NGI+P  VT+N L++ +C  GL+ +      +
Sbjct: 598 VIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQ 657

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
            +  D       VI  TI++  + K G   +A+  + +M  + I  + + Y  L+  +  
Sbjct: 658 CIVKD---IELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSK 714

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           +G+   A   F +M+  G +PD ++YNTL++  C+   LD+       +S   +  D  S
Sbjct: 715 SGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCS 774

Query: 369 YKTIIQGL 376
           Y   + G+
Sbjct: 775 YNAFVDGI 782



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 66/126 (52%), Gaps = 4/126 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+  C  GKI  A+   ++M  +G  P+ +T+  L+    K G+ E+A  +  EM 
Sbjct: 670 YTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMV 729

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL----CKK 236
            +   P+  +YN  I+G+C V+ LDK +   + M++  ++ +  ++N  V  +    C+K
Sbjct: 730 SLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITTPWCQK 789

Query: 237 GLLGDA 242
             + +A
Sbjct: 790 EAVSNA 795


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 216/430 (50%), Gaps = 3/430 (0%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L  +M   G   D  T N L+N LC +  L +       +     SPN  TYN  I G C
Sbjct: 91  LYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLC 150

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD---DDGK 256
             + + +A  LF  M   G  P+ VT+  L+  LC  G +  A+K   E+L D    +  
Sbjct: 151 MEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEIN 210

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              +VIT  I++D   K G + +A  L+ +M  + +   I++YN LI+GFC  G    + 
Sbjct: 211 CKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESK 270

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +ML +G  PD++T+N L++ LCK+GK+ EA    GV+ ++G+ PD ++Y ++I+G 
Sbjct: 271 RLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGF 330

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C+ GD+  ARE  +SM  K   P+   +NV+I+GY +   +  A  + + ML  G   NV
Sbjct: 331 CMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNV 390

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+++L+      G + DA  L   M   GI  + +TY + +   C    +  A++L+ E
Sbjct: 391 ITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTE 450

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           +       +I     LI G C  G ++ A E+F K+   G   + + + I+   + R  +
Sbjct: 451 LKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQ 510

Query: 557 SDKARDIHQK 566
            DKA  + QK
Sbjct: 511 VDKANVLIQK 520



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 214/431 (49%), Gaps = 9/431 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM--- 179
            +I+ LC+  +I  A  L  +M + G  PDV+T+  L+  LC  G++  A  + +EM   
Sbjct: 144 TLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLND 203

Query: 180 ---SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
               E+   PN  TYN  + G C+V   D+A  LF  M   G+ P+ +++N L+H  C  
Sbjct: 204 ISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCA 263

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G   ++ + L E+L   D     D++T  +L+D+  K G   +A  L   M +  I  D+
Sbjct: 264 GKWEESKRLLDEML---DQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDL 320

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YN LI GFC+ GD++SA   F  M  +G  PDVI+YN L+N   K  K++EA   Y  
Sbjct: 321 VTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNE 380

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G  P+ I+Y ++++G+ + G +  A++    M    +    + + + +DG  +   
Sbjct: 381 MLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDC 440

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L  A  +   + S      +   N LI    + G +  A+ L +++  +G  P+V TY +
Sbjct: 441 LFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTI 500

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +I   C  G +  A  L  +M   G TPDIITY  L++G      ++E  ++  ++    
Sbjct: 501 MIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKD 560

Query: 537 LAIDHIPFRIL 547
           ++ D I   I+
Sbjct: 561 VSPDAITCSIV 571



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 159/300 (53%), Gaps = 6/300 (2%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           Q  +L+N M    + +D    N+L+N  C    +   FA F  +L+RG+ P+++TYNTL+
Sbjct: 87  QVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLI 146

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML----- 393
             LC + ++ EA+  +  + K G  PD ++Y T+I+GLC  G+I  A +    ML     
Sbjct: 147 KGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISR 206

Query: 394 -EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
            E +  P    +N+I+DG  + G    A  + + M + G+  ++ ++N+LI      G  
Sbjct: 207 YEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKW 266

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            ++  L  EML  G+ PD+ T+N+LI   C  G +  A +L   M+  GI PD++TY  L
Sbjct: 267 EESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSL 326

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           I+G C  G++  A E+F  + + G   D I + +L   Y +  + ++A  ++ + LL  K
Sbjct: 327 IEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGK 386



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 164/336 (48%), Gaps = 14/336 (4%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E+   L  M D G     L+ D      +I  LC  GK+  A  L   MI+ G VPD++
Sbjct: 267 EESKRLLDEMLDQG-----LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLV 321

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+N L+   C +GDL  A  +   M      P+  +YN  I GY +  ++++A+ L++ M
Sbjct: 322 TYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEM 381

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G RPN +T++ L+  +   G + DA K    + A        +  T  I +D   KN
Sbjct: 382 LLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHG---IAENSYTYGIFLDGLCKN 438

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
              F+A+ L+ ++   N + +I   N LI+G C  G + +A+  F ++   G  P+V+TY
Sbjct: 439 DCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTY 498

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
             +++  C++G++D+A+     +   G  PD I+Y T+++G      + +  + L  M +
Sbjct: 499 TIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQ 558

Query: 395 KSVVPEPHIWNVIID------GYGRCGDLSNAFSIR 424
           K V P+    ++++D       Y  C  L   F I+
Sbjct: 559 KDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQ 594



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 183/403 (45%), Gaps = 44/403 (10%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMI------QKGTVPDVLTHNYLVNELCKIGDLE 170
           D   +  +I+ LC  G I  AL L ++M+      +    P+V+T+N +V+ LCK+G  +
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRED 232

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  +  EM      P+  +YN+ I G+C   + +++  L   M + G++P+ VT N+L+
Sbjct: 233 EAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLI 292

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LCK+G + +A K LG ++   +     D++T   L++ +   GD   A  L+  M  K
Sbjct: 293 DTLCKEGKVIEAKKLLGVMI---ESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK 349

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL------------ 338
             + D+++YNVLING+     +  A   + +ML  G  P+VITY++LL            
Sbjct: 350 GCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDA 409

Query: 339 -----------------------NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                                  + LCK   L EA   +  L  +    +  +   +I G
Sbjct: 410 KKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDG 469

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           LC  G +  A E    +  +   P    + ++I G+ R G +  A  +   M + G + +
Sbjct: 470 LCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 529

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           + T+N L+        + +   L   M    + PD  T ++++
Sbjct: 530 IITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 572



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 2/175 (1%)

Query: 396 SVVPEPHIWNVIIDGYGRCGDLS--NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           S +P P+        + + G+++  +A     LM+    + ++ +FN L+    +     
Sbjct: 27  SAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYS 86

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
             FSL  +M L G+  D  T N+L+   CN+  +      +  +LRRG +P+I+TY  LI
Sbjct: 87  QVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLI 146

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           KG C    + EA  +F ++Q LG   D + +  L K        + A  +HQ+ L
Sbjct: 147 KGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEML 201


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 210/401 (52%), Gaps = 4/401 (0%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
            VL+ N L++ L K  +    + V +EM   + SPN  T+N  I G C+V +L+KA  + 
Sbjct: 194 SVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVV 253

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M   G  PN VT+N L+   CK G +G   K    +    + K + + +T  +L+D +
Sbjct: 254 DDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF 313

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K+ +   AL ++ +M  + ++  +V YN L+NG C  G ++ A     +ML     P+V
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNV 373

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           ITYN L+N  CK+  L+EA   +  + K G+ P+ I++ T++ G C  G + +A  FLL 
Sbjct: 374 ITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEA--FLLQ 431

Query: 392 --MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             MLEK  +P    +N +I G+ R G +    ++ + M   GV ++  T+N LI A    
Sbjct: 432 KVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEK 491

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
                A  L  EML  G+ P   TYN+L+   C  G++  AL L  +M + G   +++TY
Sbjct: 492 KEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTY 551

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
             LI+G+C +G +++A  +  ++   GL  +   + I+K+ 
Sbjct: 552 NVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEE 592



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 210/407 (51%), Gaps = 13/407 (3%)

Query: 117 DYRRHVAVIR------DLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           DYR  ++V+        L    + G   ++ ++MI++   P+++T N ++N LCK+G L 
Sbjct: 188 DYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLN 247

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYC---RVNELDKALHLFSTMANNGIRPNRVTHN 227
           KA  V+ +M      PN  TYN  I GYC   RV ++ KA  +   M  N + PN VT N
Sbjct: 248 KAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFN 307

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           +L+   CK   L  A+K   E+ +         V+T   L++     G   +A  L ++M
Sbjct: 308 VLIDGFCKDENLSAALKVFEEMQSQG---LKPTVVTYNSLVNGLCNEGKLNEAKVLLDEM 364

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
              N++ +++ YN LING+C    +  A   F  + K+G  P+VIT+NTLL+  CK GK+
Sbjct: 365 LSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKM 424

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           +EA     V+ + G  P+  +Y  +I G C  G + + +  L  M  + V  +   +N++
Sbjct: 425 EEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNIL 484

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I  +    +   A  + D ML  G+  +  T+N L+      G++  A +L+K+M  +G 
Sbjct: 485 ISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGR 544

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           + +V TYN+LI   C  G +  A  L +EML +G+ P+  TY E+IK
Sbjct: 545 WANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY-EIIK 590



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 151/293 (51%), Gaps = 3/293 (1%)

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
           KG    ++  +   L+   G+  ++ I + +L+ +Y +N      L  +        +  
Sbjct: 135 KGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLS 194

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           +++ N L++      +       + +M++R   P++IT+NT++N LCK GKL++A     
Sbjct: 195 VLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVD 254

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDI---VKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            +   G  P+ ++Y T+I G C  G +    KA   L  M+E  V P    +NV+IDG+ 
Sbjct: 255 DMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFC 314

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +  +LS A  + + M S G+   V T+N+L+      G + +A  L  EML   + P+V 
Sbjct: 315 KDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVI 374

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           TYN LI   C    +  A +L+D + ++G+TP++IT+  L+ G+C  G M+EA
Sbjct: 375 TYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEA 427



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 123/233 (52%), Gaps = 4/233 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C    +  A  L   + ++G  P+V+T N L++  CK G +E+A  + + M E 
Sbjct: 378 ALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEK 437

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN +TYN  I G+CR  ++++  +L + M   G++ + VT+NIL+ A C+K     A
Sbjct: 438 GFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKA 497

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + + E+L  D G   S  +T  IL++ Y   G+   AL L   M ++    ++V YNVL
Sbjct: 498 ARLIDEML--DKGLKPSH-LTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVL 554

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL-DEASHFY 354
           I G+C  G +  A     +ML++G +P+  TY  +   + ++G L D   H Y
Sbjct: 555 IQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLY 607



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+  +  +  ++   C+ G +  AL LR++M ++G   +V+T+N L+   C+ G LE A+
Sbjct: 509 LKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDAN 568

Query: 174 HVIREMSEMRPSPNCATY 191
            ++ EM E    PN  TY
Sbjct: 569 GLLNEMLEKGLIPNRTTY 586


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 230/443 (51%), Gaps = 3/443 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C   ++  A  +  K+++ G  PD +T N L+  LC  G +++A H    +  +    + 
Sbjct: 114 CHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQ 173

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            +Y   I G C++ E   AL +   +    ++ N V +N ++ +LCK  L+ DA +   +
Sbjct: 174 FSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQ 233

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           ++A    K + DV+T + L+  +   G   +A  L+ +M  KNI  D   +N+L++  C 
Sbjct: 234 MIAK---KISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCK 290

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G++  A      M+K G +P+V+TY++L++  C   ++++A H    +S+ G AP+  S
Sbjct: 291 EGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHS 350

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y T+I G C    + +A      M  K + P+   +N +IDG  + G +S A+ + D M 
Sbjct: 351 YCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMH 410

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G  +N+FT+N LI A  +   +  A +L K++   GI PD++T+N+LI   C +G + 
Sbjct: 411 DNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLK 470

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A  ++ ++L +G + +  TY  ++ G C  G   EAE + +K+   G+  D + +  L 
Sbjct: 471 NAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLI 530

Query: 549 KRYRRMKESDKARDIHQKWLLRN 571
           +      E++KA  + ++ + R+
Sbjct: 531 QALFHKDENEKAEKLLREMIARD 553



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 220/413 (53%), Gaps = 5/413 (1%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           TA+ L R++   G  PD+ T N L+N  C + ++  A  ++ ++ +M   P+  T+N  I
Sbjct: 86  TAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLI 145

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   ++ +ALH    +   G   ++ ++  L++ LCK G    A++ L ++    DG
Sbjct: 146 KGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKI----DG 201

Query: 256 KATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           K    +V+    ++DS  K+     A  L++ M  K I  D+V ++ LI GFC+ G +  
Sbjct: 202 KLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEE 261

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           AF  F +M+ +   PD  T+N L++ LCK+G L  A +   V+ K GV P+ ++Y +++ 
Sbjct: 262 AFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMD 321

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C+   + KA+  L ++ +    P  H +  +I+G+ +   +  A S+ + M   G++ 
Sbjct: 322 GYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAP 381

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +  T+N+LI    + G I  A+ L  EM  +G   ++FTYN LI A C   H+  A+ L 
Sbjct: 382 DKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALV 441

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            ++  +GI PD+ T+  LI G C  G +K A++VF  + + G +++   + I+
Sbjct: 442 KKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIM 494



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 161/285 (56%), Gaps = 3/285 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  DY     ++  LC  G +  A  +   M+++G +P+V+T++ L++  C +  + KA 
Sbjct: 274 INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAK 333

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           HV+  +S+M  +PN  +Y   I G+C++  +D+AL LF+ M   GI P++VT+N L+  L
Sbjct: 334 HVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGL 393

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G +  A + + E+   D+G+  +++ T   L+D+  KN    QA+AL   +  + IQ
Sbjct: 394 CKSGRISYAWELVDEM--HDNGQP-ANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQ 450

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+  +N+LI G C  G + +A   F  +L +G+  +  TYN ++N LCK+G  DEA   
Sbjct: 451 PDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEAL 510

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
              +   G+ PD ++Y+T+IQ L    +  KA + L  M+ + VV
Sbjct: 511 LSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 193/387 (49%), Gaps = 3/387 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  LC  G+  TAL + RK+  K    +V+ +N +++ LCK   +  A  + 
Sbjct: 172 DQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELY 231

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M   + SP+  T++A I G+C V +L++A  LF  M    I P+  T NILV ALCK+
Sbjct: 232 SQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKE 291

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A   L  ++ +       +V+T + LMD Y       +A  + N + Q     + 
Sbjct: 292 GNLKGAKNMLVVMMKEG---VMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNA 348

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
            +Y  +INGFC    +  A + F  M  +G  PD +TYN+L++ LCK G++  A      
Sbjct: 349 HSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDE 408

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G   +  +Y  +I  LC +  + +A   +  + ++ + P+ + +N++I G  + G 
Sbjct: 409 MHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGR 468

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L NA  +   +LS G S N +T+N ++    + G   +A +L  +M  +GI PD  TY  
Sbjct: 469 LKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYET 528

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGIT 503
           LI A  +      A +L  EM+ R + 
Sbjct: 529 LIQALFHKDENEKAEKLLREMIARDVV 555



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 167/307 (54%), Gaps = 2/307 (0%)

Query: 256 KATSDVITSTILMDSYFKNGDKF--QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
           K TS +I    ++ S  K+ +     A++L   +    I  DI  +N+LIN +C   +++
Sbjct: 61  KPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMN 120

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            AF+   ++LK G+ PD IT+NTL+  LC  GK+ EA HF+  +   G   DQ SY T+I
Sbjct: 121 FAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLI 180

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            GLC  G+   A + L  +  K V     ++N IID   +   + +A+ +   M++  +S
Sbjct: 181 NGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKIS 240

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            +V TF+ALI      G + +AF L +EM+L  I PD +T+N+L+ A C  G++  A  +
Sbjct: 241 PDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNM 300

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
              M++ G+ P+++TY+ L+ G+C    + +A+ V   I  +G A +   +  +   + +
Sbjct: 301 LVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCK 360

Query: 554 MKESDKA 560
           +K  D+A
Sbjct: 361 IKMVDEA 367



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/430 (23%), Positives = 189/430 (43%), Gaps = 38/430 (8%)

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVN--ELDKALHLFSTMANNGIRPNRVTHNILV 230
           +H++R     +P+ +   +N  +    + N      A+ L   +  +GI P+  T NIL+
Sbjct: 55  NHLLRT----KPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILI 110

Query: 231 HALCKKGLLGDAVKFLGEVLADD-----------------DGKATS-------------- 259
           +  C    +  A   + ++L                    +GK                 
Sbjct: 111 NCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFH 170

Query: 260 -DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            D  +   L++   K G+   AL +   +  K ++ ++V YN +I+  C +  +  A+  
Sbjct: 171 LDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYEL 230

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           + QM+ +   PDV+T++ L+   C  G+L+EA   +  +    + PD  ++  ++  LC 
Sbjct: 231 YSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCK 290

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G++  A+  L+ M+++ V+P    ++ ++DGY     ++ A  + + +   G + N  +
Sbjct: 291 EGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHS 350

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +  +I    +   + +A SL  +M   GI PD  TYN LI   C  G I  A +L DEM 
Sbjct: 351 YCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMH 410

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             G   +I TY  LI   C   ++ +A  +  KI+  G+  D   F IL     ++    
Sbjct: 411 DNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLK 470

Query: 559 KARDIHQKWL 568
            A+D+ Q  L
Sbjct: 471 NAQDVFQDLL 480



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 2/153 (1%)

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
           D+ N  S  + +L    +S++  FN ++  L ++       A SL + +   GI PD+FT
Sbjct: 46  DVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFT 105

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +N+LI   C++  ++ A  +  ++L+ G  PD IT+  LIKG C  G +KEA      + 
Sbjct: 106 FNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVL 165

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            LG  +D   +  L     ++ E+  A  + +K
Sbjct: 166 ALGFHLDQFSYGTLINGLCKIGETRTALQMLRK 198


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 212/443 (47%), Gaps = 7/443 (1%)

Query: 114 LETDYR----RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           LE+D+R     +   I+       +G  L L  +M      P V  +N L++ LCK+  +
Sbjct: 544 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQM 603

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           + A+ +  EM   R  P+  TYN  I GYC+    +K+  +   M  + I P+ +T N L
Sbjct: 604 KDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTL 663

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  L K G++ DA   L E+    D     D  T +IL D Y  N     AL ++     
Sbjct: 664 LKGLFKAGMVEDAENVLTEM---KDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVD 720

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             ++ +    ++L+N  C  G I  A     + + +G +P+ + YNT+++   ++G L  
Sbjct: 721 SGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVG 780

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A      + K G+ PD ++Y  +I+  C  GD+  A + +  M  K V P    +N++I 
Sbjct: 781 ARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIG 840

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           GYGR  +    F +   M   G   NV ++  LI    +G  + +A  +K++M   G+ P
Sbjct: 841 GYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 900

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +V  YN+LI   C+ G I  A +  +EM ++GI  +++TY  LI G    G + EAE++ 
Sbjct: 901 NVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDML 960

Query: 530 AKIQTLGLAIDHIPFRILKKRYR 552
            +I   GL  D   +  L   YR
Sbjct: 961 LEISRKGLKPDVFTYNSLISGYR 983



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 212/410 (51%), Gaps = 4/410 (0%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
             +I   C  G    +  +R +M      P ++T N L+  L K G +E A++V+ EM + 
Sbjct: 627  TLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQ 686

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               P+  T++    GY   ++ D AL ++ T  ++G++ N  T +IL++ALCK+G +  A
Sbjct: 687  GFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKA 746

Query: 243  VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
             + LG  +A   G   ++V+ +T ++D Y + GD   A    + M ++ ++ D +AYN L
Sbjct: 747  EEILGREMAK--GLVPNEVLYNT-MIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCL 803

Query: 303  INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            I  FC  GD+ +A     +M  +G  P V TYN L+    ++ + D+       +   G 
Sbjct: 804  IRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGT 863

Query: 363  APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             P+ +SY T+I  LC    +++A+     M ++ V P   I+N++IDG    G + +AF 
Sbjct: 864  MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFR 923

Query: 423  IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
              + M   G+  N+ T+N LI   +  G + +A  +  E+   G+ PDVFTYN LI    
Sbjct: 924  FSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYR 983

Query: 483  NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
              G++   + LY+EM   GI P + TY  LI   C +  ++  +++F ++
Sbjct: 984  FAGNVQRCIALYEEMKTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEM 1032



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 194/391 (49%), Gaps = 11/391 (2%)

Query: 144  MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
            M ++G  PD L +N L+   C++GD+E A+  + +M     SP+  TYN  I GY R  E
Sbjct: 788  MEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYE 847

Query: 204  LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD--DGKATSDV 261
             DK   L   M +NG  PN V++  L++ LCK   L +A     +++  D  D   + +V
Sbjct: 848  FDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA-----QIVKRDMEDRGVSPNV 902

Query: 262  ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
                +L+D     G    A     +MF+K I+ ++V YN LI+G  +NG ++ A     +
Sbjct: 903  RIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLE 962

Query: 322  MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
            + ++G  PDV TYN+L++     G +      Y  +  +G+ P   +Y  +I  LC    
Sbjct: 963  ISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLIS-LCTKEG 1021

Query: 382  IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
            I   ++    M   S+ P+  ++N ++  Y   GD+  AF+++  M+   +  +  T+N+
Sbjct: 1022 IELTKKIFGEM---SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNS 1078

Query: 442  LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
            LIL + + G + +  SL  EM    + P+  TY++++   C +     A   Y EM  +G
Sbjct: 1079 LILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKG 1138

Query: 502  ITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            +  D+    EL+ G       KEAE V +++
Sbjct: 1139 LLLDVCIGDELVSGLKEEWRSKEAENVISEM 1169



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 165/360 (45%), Gaps = 3/360 (0%)

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           + +A  LF  + N GI P+  +  +L+  L K       +     +L + D + +  +  
Sbjct: 498 ISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNIL-ESDFRPSKFMYG 556

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             I   +  K  D  + L L+N M    I   +  YNVLI+G C    +  A   F +ML
Sbjct: 557 KAI--QAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEML 614

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            R  LP +ITYNTL++  CK G  +++      +    + P  I++ T+++GL   G + 
Sbjct: 615 ARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVE 674

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A   L  M ++  VP+   ++++ DGY        A  + +  +  G+  N +T + L+
Sbjct: 675 DAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILL 734

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            A  + G I  A  +    +  G+ P+   YN +I      G +  A    D M ++G+ 
Sbjct: 735 NALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMK 794

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PD + Y  LI+  C  G+M+ AE+   K++  G++     + IL   Y R  E DK  D+
Sbjct: 795 PDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDL 854



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 112/239 (46%), Gaps = 7/239 (2%)

Query: 114  LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            +E +   +  +I  L + GK+  A  +  ++ +KG  PDV T+N L++     G++++  
Sbjct: 933  IELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCI 992

Query: 174  HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             +  EM      P   TY+  I+  C    ++    +F  M+   ++P+ + +N ++H  
Sbjct: 993  ALYEEMKTSGIKPTLKTYHLLIS-LCTKEGIELTKKIFGEMS---LQPDLLVYNGVLHCY 1048

Query: 234  CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
               G +  A     +++    G    D  T   L+    K G   +  +L ++M  + ++
Sbjct: 1049 AVHGDMDKAFNLQKQMIEKSIG---LDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREME 1105

Query: 294  TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             +   Y++++ G C   D   A+ ++ +M ++G L DV   + L++ L ++ +  EA +
Sbjct: 1106 PEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAEN 1164



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 10/170 (5%)

Query: 113  TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
            +L+ D   +  V+    + G +  A  L+++MI+K    D  T+N L+    K+G L + 
Sbjct: 1033 SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEV 1092

Query: 173  DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
              +I EM      P   TY+  + G+C + +   A   +  M   G+  +    + LV  
Sbjct: 1093 RSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSG 1152

Query: 233  LCKKGLLGDAV--------KFLGEVLADDDGKATSDVITST--ILMDSYF 272
            L ++    +A         + LG+V+ D+D  AT     +   +L D YF
Sbjct: 1153 LKEEWRSKEAENVISEMNGRKLGDVIVDEDLSATERSFENQECVLQDKYF 1202


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 152/516 (29%), Positives = 236/516 (45%), Gaps = 73/516 (14%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C   K+  A+ LR +M+  G   ++   N L+N  CK G + +A+ ++  M + 
Sbjct: 329 VLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDW 388

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P   +Y+  + G+CR   + KA+ +++ M   GI+ N VTHN L+  LC+ G   DA
Sbjct: 389 DLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDA 448

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +     +L       T D ++   L+D  FK G+ F+ALALWND+  +       A+N +
Sbjct: 449 LHVWHLMLKRG---VTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTM 505

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA------------ 350
           INGFC    +  A   F +M + GF PD +TY TL++  CK G ++EA            
Sbjct: 506 INGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAI 565

Query: 351 -------SHFYGVLSKT----------------GVAPDQISYKTIIQGLCIHGDIVKARE 387
                  +   G L K+                G++P+ ++Y T+I G C  G + KA  
Sbjct: 566 LPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFT 625

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV--------------- 432
               M+EK   P   I + I+    R G +  A  +   M++  V               
Sbjct: 626 AYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADD 685

Query: 433 --------------SSNVFT------FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
                         SS  F+      +N  I    + G + DA  +   +LL G  PD F
Sbjct: 686 GNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNF 745

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY  LI      G+++ A  L DEML+RG+ P+IITY  LI G C  GN+  A+++F K+
Sbjct: 746 TYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKL 805

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
              GLA + I + IL   Y +   + +A D+  K L
Sbjct: 806 HLKGLAPNVISYNILIDGYCKNGNTREALDLRNKML 841



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 238/461 (51%), Gaps = 38/461 (8%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  ++++   H ++++ LC  G    AL +   M+++G  PD +++  L++ L K+G+ 
Sbjct: 421 LRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEF 480

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A  +  ++       +   +N  I G+C++ ++ +A   F+ M   G  P+ VT+  L
Sbjct: 481 FRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTL 540

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +   CK G + +A K + E +  +    + ++  S  L+   FK+    + + L ++M  
Sbjct: 541 IDGYCKLGNVEEAFK-VKEKMEKEAILPSIELYNS--LIGGLFKSKKTREVMDLLSEMCL 597

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K +  ++V Y  LI G+C  G +  AF  +  M+++GF P+VI  + +++ L + G++DE
Sbjct: 598 KGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDE 657

Query: 350 AS--------------HFY---------GVLSKTGVA------------PDQISYKTIIQ 374
           A+              H Y         G L    +A            P+ + Y   I 
Sbjct: 658 ANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIA 717

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           GLC  G +  A++   S+L +   P+   +  +I GY   G++++AFS+RD ML  G++ 
Sbjct: 718 GLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAP 777

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           N+ T+NALI    + G++  A  L  ++ L G+ P+V +YN+LI   C  G+   AL L 
Sbjct: 778 NIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLR 837

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           ++ML+ GI+P +ITY+ LI G C +G+M +A  +  +++ L
Sbjct: 838 NKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMREL 878



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 207/419 (49%), Gaps = 4/419 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP-NCAT 190
           G +  A  + + M ++G + + +T   L+   C+   LE+A+ V+REM        +   
Sbjct: 267 GDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYA 326

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y   I GYCRV ++D A+ L   M N G+R N    N L++  CK G + +A + L  ++
Sbjct: 327 YGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMV 386

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
              D     +  + + LMD + + G   +A++++N+M +  IQ+++V +N L+ G C  G
Sbjct: 387 ---DWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVG 443

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
               A   +  MLKRG  PD ++Y TLL+ L K G+   A   +  +   G      ++ 
Sbjct: 444 AFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFN 503

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T+I G C    +++A E    M E    P+   +  +IDGY + G++  AF +++ M   
Sbjct: 504 TMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKE 563

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
            +  ++  +N+LI    +     +   L  EM L G+ P+V TY  LI   C+ G +  A
Sbjct: 564 AILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKA 623

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
              Y +M+ +G  P++I  ++++      G + EA  +  K+  L + +DH  F  L K
Sbjct: 624 FTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHK 682



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 227/508 (44%), Gaps = 67/508 (13%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  G++  A  L  +M+     P+  +++ L++  C+ G + KA  V  EM  +
Sbjct: 364 ALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRV 423

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N  T+N+ + G CRV   + ALH++  M   G+ P+ V++  L+  L K G    A
Sbjct: 424 GIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRA 483

Query: 243 VKFLGEVLADDDGKAT--------------------------------SDVITSTILMDS 270
           +    ++LA   G++T                                 D +T   L+D 
Sbjct: 484 LALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDG 543

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           Y K G+  +A  +   M ++ I   I  YN LI G   +           +M  +G  P+
Sbjct: 544 YCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPN 603

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+TY TL+   C +G+LD+A   Y  + + G AP+ I    I+  L   G I +A   L 
Sbjct: 604 VVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQ 663

Query: 391 SMLEKSV-----------------------------------VPEPHIWNVIIDGYGRCG 415
            M+   V                                   +P   ++N+ I G  + G
Sbjct: 664 KMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSG 723

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            + +A  I   +L  G S + FT+  LI   +  G++ DAFSL+ EML  G+ P++ TYN
Sbjct: 724 KVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYN 783

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            LI   C  G++  A +L+D++  +G+ P++I+Y  LI G+C  GN +EA ++  K+   
Sbjct: 784 ALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKE 843

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDI 563
           G++   I +  L   + +  +  KA ++
Sbjct: 844 GISPSLITYSALIYGFCKQGDMGKATNL 871



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 192/402 (47%), Gaps = 3/402 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C   K+  A     +M + G  PD +T+  L++  CK+G++E+A  V  +M + 
Sbjct: 504 TMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKE 563

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   YN+ I G  +  +  + + L S M   G+ PN VT+  L+   C +G L  A
Sbjct: 564 AILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKA 623

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                +++  + G A + +I S I+  S ++ G   +A  L   M   ++  D   ++ L
Sbjct: 624 FTAYFDMI--EKGFAPNVIICSKIV-SSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRL 680

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
                 N D         +  K   LP+ + YN  +  LCK GK+D+A   +  L   G 
Sbjct: 681 HKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGF 740

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           +PD  +Y T+I G    G++  A      ML++ + P    +N +I+G  + G+L  A  
Sbjct: 741 SPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQK 800

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D +   G++ NV ++N LI    + G+  +A  L+ +ML +GI P + TY+ LI   C
Sbjct: 801 LFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFC 860

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
             G +  A  L DEM       +I  + +L++GH   G +K+
Sbjct: 861 KQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKK 902



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 184/417 (44%), Gaps = 53/417 (12%)

Query: 207 ALHLFSTMA-NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +LH F   +  +  RPN  +H  LVH L +  +  +   +L E++       +S V+ + 
Sbjct: 77  SLHFFKLASKQSNFRPNVNSHCKLVHILSRARMYDETRSYLNELVTPSKNNYSSLVVWNE 136

Query: 266 I----------------LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +                ++  Y + G    AL ++++M +      + + N L++     
Sbjct: 137 LVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRK 196

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G+ S+A   +  + + G +PDV T + ++N  CK G ++ A  F   +   G   + ++Y
Sbjct: 197 GESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTY 256

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSV-------------------------------- 397
            ++I G    GD+ +A   L  M E+ +                                
Sbjct: 257 NSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMER 316

Query: 398 ----VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
               V + + + V+IDGY R   + +A  +RD ML+ G+  N+F  NALI    + G + 
Sbjct: 317 SEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVS 376

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L   M+   + P+ ++Y+ L+   C  G +  A+ +Y+EMLR GI  +++T+  L+
Sbjct: 377 EAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLL 436

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           KG C  G  ++A  V+  +   G+  D + +  L     +M E  +A  +    L R
Sbjct: 437 KGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILAR 493



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 1/118 (0%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           NLDR + + D   ++  L  +   +  +I   C  G    AL LR KM+++G  P ++T+
Sbjct: 794 NLDRAQKLFDKLHLK-GLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITY 852

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           + L+   CK GD+ KA +++ EM E+    N A +   + G+ +  E+ K   L + M
Sbjct: 853 SALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 205/391 (52%), Gaps = 3/391 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M++    PDV T N LV+ LCK G + +++ +  ++ +    PN  T+N FI G C+  
Sbjct: 285 EMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEG 344

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            LD+A+ L   ++  G+RP+ VT+N ++  LC+K  + +A + L +++   +G    +  
Sbjct: 345 SLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMV---NGGFEPNDF 401

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   ++D Y K G    A  +  D   K  + D   Y  L+NGFC +GD   A A F   
Sbjct: 402 TYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDG 461

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L +G  P +I YNTL+  LC+QG +  A      +++ G  PD  +Y  II GLC  G +
Sbjct: 462 LGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCL 521

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A   +   + K  +P+   +N ++DGY R   L +A  + + M S G++ +V T+N L
Sbjct: 522 SDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTL 581

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +    +     +   + K M   G  P++ TYN +I + CN   ++ A+ L  EM  +G+
Sbjct: 582 LNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGL 641

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           TPD++++  LI G C  G++  A  +F  ++
Sbjct: 642 TPDVVSFGTLITGFCKVGDLDGAYGLFRGME 672



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 218/450 (48%), Gaps = 5/450 (1%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           DR + + D   + C L  D      ++  LC  G +  +  L  K++++G  P++ T N 
Sbjct: 277 DRARELFDE-MLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNI 335

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
            +  LCK G L++A  ++  +S     P+  TYN  I G CR + + +A      M N G
Sbjct: 336 FIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGG 395

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
             PN  T+N ++   CKKG++ DA + L + +         D  T   L++ + ++GD  
Sbjct: 396 FEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKG---FKPDEFTYCSLVNGFCQDGDPD 452

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           QA+A++ D   K ++  I+ YN LI G C  G I  A     +M ++G  PD+ TYN ++
Sbjct: 453 QAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLII 512

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           N LCK G L +A+H  G     G  PD  +Y T++ G C    +  A E +  M  + + 
Sbjct: 513 NGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMT 572

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P+   +N +++G  +         I   M   G + N+ T+N +I +      + +A  L
Sbjct: 573 PDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDL 632

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR-GITPDIITYTELIKGHC 517
             EM   G+ PDV ++  LI   C +G +  A  L+  M ++  ++    TY  +I    
Sbjct: 633 LGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFS 692

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            + NMK A  +F++++  G   D+  +R+L
Sbjct: 693 EQLNMKMALRLFSEMKKNGCDPDNYTYRVL 722



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 211/416 (50%), Gaps = 4/416 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L  D   +  VI  LC   ++  A     KM+  G  P+  T+N +++  CK G + 
Sbjct: 358 REGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVV 417

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A+ ++++       P+  TY + + G+C+  + D+A+ +F      G+RP+ + +N L+
Sbjct: 418 DANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLI 477

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LC++GL+  A++ + E +A+   K   D+ T  ++++   K G    A  L  D   K
Sbjct: 478 KGLCQQGLILPALQLMNE-MAEKGCKP--DIWTYNLIINGLCKMGCLSDANHLIGDAITK 534

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
               DI  YN L++G+C    + SA     +M  +G  PDVITYNTLLN LCK  K +E 
Sbjct: 535 GCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEV 594

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +  +++ G AP+ I+Y TII+ LC    + +A + L  M  K + P+   +  +I G
Sbjct: 595 MEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITG 654

Query: 411 YGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           + + GDL  A+ + R +   + VS    T+N +I A +   ++  A  L  EM  +G  P
Sbjct: 655 FCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDP 714

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           D +TY +LI   C  G+++   +   E + +G  P + T+  ++   C    ++EA
Sbjct: 715 DNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEA 770



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 211/447 (47%), Gaps = 3/447 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E+D   +   I+  C  G+   AL L R M   G   + + +  +V    + GD ++A 
Sbjct: 221 VESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRAR 280

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM E    P+  T+N  +   C+   + ++  LF  +   G+ PN  T NI +  L
Sbjct: 281 ELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGL 340

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G L  AV+ LG V  +       DV+T   ++    +     +A    + M     +
Sbjct: 341 CKEGSLDRAVRLLGCVSREG---LRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFE 397

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +   YN +I+G+C  G +  A       + +GF PD  TY +L+N  C+ G  D+A   
Sbjct: 398 PNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAV 457

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +      G+ P  I Y T+I+GLC  G I+ A + +  M EK   P+   +N+II+G  +
Sbjct: 458 FKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCK 517

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G LS+A  +    ++ G   ++FT+N L+    R   +  A  L   M   G+ PDV T
Sbjct: 518 MGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVIT 577

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN L+   C        ++++  M  +G  P+IITY  +I+  C    + EA ++  +++
Sbjct: 578 YNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMK 637

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKA 560
           + GL  D + F  L   + ++ + D A
Sbjct: 638 SKGLTPDVVSFGTLITGFCKVGDLDGA 664



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 208/441 (47%), Gaps = 3/441 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  L   G    A  +  +M  K    DV T+   +   C+ G    A  ++R M  +
Sbjct: 195 AIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVL 254

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N   Y   +TG+    + D+A  LF  M    + P+  T N LVHALCKKG + ++
Sbjct: 255 GCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLES 314

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +   +VL         ++ T  I +    K G   +A+ L   + ++ ++ D+V YN +
Sbjct: 315 ERLFDKVLKRG---VCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTV 371

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G C    +  A     +M+  GF P+  TYN++++  CK+G + +A+         G 
Sbjct: 372 ICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGF 431

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD+ +Y +++ G C  GD  +A       L K + P   ++N +I G  + G +  A  
Sbjct: 432 KPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQ 491

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M   G   +++T+N +I    + G + DA  L  + +  G  PD+FTYN L+   C
Sbjct: 492 LMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYC 551

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               +  A++L + M  +G+TPD+ITY  L+ G C     +E  E+F  +   G A + I
Sbjct: 552 RQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNII 611

Query: 543 PFRILKKRYRRMKESDKARDI 563
            +  + +     K+ ++A D+
Sbjct: 612 TYNTIIESLCNSKKVNEAVDL 632



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 193/404 (47%), Gaps = 8/404 (1%)

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           G +++A      M      P+  +YNA +         ++A  ++  M +  +  +  T+
Sbjct: 169 GKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTY 228

Query: 227 NILVHALCKKGLLGDAVKFLGE--VLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
            I + + C+ G    A++ L    VL        S+ +    ++  +++ GD  +A  L+
Sbjct: 229 TIRIKSFCRTGRPYAALRLLRNMPVLG-----CFSNAVAYCTVVTGFYEFGDNDRARELF 283

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           ++M +  +  D+  +N L++  C  G +  +   F ++LKRG  P++ T+N  +  LCK+
Sbjct: 284 DEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKE 343

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
           G LD A    G +S+ G+ PD ++Y T+I GLC    +V+A E L  M+     P    +
Sbjct: 344 GSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTY 403

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           N IIDGY + G + +A  I    +  G   + FT+ +L+    + G    A ++ K+ L 
Sbjct: 404 NSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLG 463

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            G+ P +  YN LI   C  G I  ALQL +EM  +G  PDI TY  +I G C  G + +
Sbjct: 464 KGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSD 523

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD-IHQKW 567
           A  +     T G   D   +  L   Y R  + D A + +++ W
Sbjct: 524 ANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMW 567



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 142/279 (50%), Gaps = 6/279 (2%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C   K+ +A+ L  +M  +G  PDV+T+N L+N LCK    E+   + + M+E   +PN 
Sbjct: 551 CRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNI 610

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN  I   C   ++++A+ L   M + G+ P+ V+   L+   CK G L  A      
Sbjct: 611 ITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRG 670

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +    D   T+   T  I++ ++ +  +   AL L+++M +     D   Y VLI+GFC 
Sbjct: 671 MEKQYDVSHTT--ATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCK 728

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G+++  + +  + +++GF+P + T+  +LNCLC + K+ EA     ++ +  + PD ++
Sbjct: 729 TGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVN 788

Query: 369 YKTIIQGLCIHGDIVKAREFLL-SMLEKSVVPEPHI-WN 405
             TI +          A EFL   + +K ++ + H  WN
Sbjct: 789 --TIFEADKKGHITYHAYEFLYDGVRDKKILKKKHPNWN 825



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 147/352 (41%), Gaps = 2/352 (0%)

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G +    T+  ++  L   G   +    L E+ ++ D      V      M  Y + G 
Sbjct: 113 QGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEA--MRFYGRKGK 170

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A+  +  M   N    + +YN ++N     G  + A   + +M  +    DV TY  
Sbjct: 171 IQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTI 230

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
            +   C+ G+   A      +   G   + ++Y T++ G    GD  +ARE    MLE  
Sbjct: 231 RIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECC 290

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           + P+   +N ++    + G +  +  + D +L  GV  N+FTFN  I    + GS+  A 
Sbjct: 291 LCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAV 350

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L   +  +G+ PDV TYN +I   C    +  A +   +M+  G  P+  TY  +I G+
Sbjct: 351 RLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGY 410

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           C +G + +A  +       G   D   +  L   + +  + D+A  + +  L
Sbjct: 411 CKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGL 462



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 113/280 (40%), Gaps = 37/280 (13%)

Query: 302 LINGFCLN-GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD------------ 348
           L++ FC+   D+        +  K+GF   + TY ++L  L   GK +            
Sbjct: 89  LVDVFCMKYEDVCIRNLQLIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSN 148

Query: 349 -----------EASHFYGVLSKTGVA-------------PDQISYKTIIQGLCIHGDIVK 384
                      EA  FYG   K   A             P   SY  I+  L   G   +
Sbjct: 149 LDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQ 208

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A +  + M +K V  + + + + I  + R G    A  +   M   G  SN   +  ++ 
Sbjct: 209 AHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVT 268

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
                G    A  L  EML   + PDV T+N L+ A C  G +  + +L+D++L+RG+ P
Sbjct: 269 GFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCP 328

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           ++ T+   I+G C  G++  A  +   +   GL  D + +
Sbjct: 329 NLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTY 368


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 215/426 (50%), Gaps = 3/426 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D      +IR LC+ GKIG AL L  KMI +G  P+V+T+  L+N LCK+G+   A  
Sbjct: 137 QPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIR 196

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++R M +    PN   ++  I   C+  ++ +A ++FS M   GI PN VT+N L+H LC
Sbjct: 197 LLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLC 256

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K          + E++   D K   DV T   ++D+  K G   +A  + + M  + ++ 
Sbjct: 257 KLCEWKHVTTLMNEMV---DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 313

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++V YN L++G CL  ++  A   F  M+ +  + +VI+YNTL+N  CK   +D+A + +
Sbjct: 314 NVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLF 373

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +S+  + P+ ++Y T+I GLC  G +  A      M+ +  +P+   +  + D   + 
Sbjct: 374 EEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKN 433

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
             L  A ++   +       ++  +  ++    R G + DA  L   +   G+ P+V+TY
Sbjct: 434 RHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTY 493

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N++I   C  G +  A +L+ EM + G +P+  TY  + +G           E+  ++  
Sbjct: 494 NIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLA 553

Query: 535 LGLAID 540
            G ++D
Sbjct: 554 RGFSVD 559



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 222/461 (48%), Gaps = 12/461 (2%)

Query: 87  FNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQ 146
           FN LD    E L     M    P   T+  D+ R   ++  +       T L L R+M  
Sbjct: 48  FNTLD----EALSTFNRMLHKQPPPSTV--DFNR---LLTSIAKTKHHSTLLSLSRQMDS 98

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
            G  PDV T   ++N LC +  ++ A   + ++ ++   P+  T+   I G C   ++ +
Sbjct: 99  FGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGE 158

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           ALHLF  M   G +PN VT+  L++ LCK G    A++ L  +   + G    +V+  + 
Sbjct: 159 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM---EQGNCQPNVVVFST 215

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+DS  K+    +A  ++++M  K I  +IV YN LI+G C   +         +M+   
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            +PDV T NT+++ LCK+G + EA     ++   GV P+ ++Y  ++ G C+  ++  A 
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 335

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           +   +M+ K  V     +N +I+GY +   +  A  + + M    ++ N  T+N LI   
Sbjct: 336 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 395

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + DA SL  EM+  G  PD+ TY  L    C   H+  A+ L   +      PDI
Sbjct: 396 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 455

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             YT ++ G C  G +++A ++F+ + + GL  +   + I+
Sbjct: 456 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIM 496



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 194/406 (47%), Gaps = 3/406 (0%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           +HN   ++      L++A      M   +P P+   +N  +T   +       L L   M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            + GI P+  T  I++++LC    +  A   L ++L         D  T T L+      
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGH---QPDATTFTTLIRGLCVE 153

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +AL L++ M  +  Q ++V Y  LING C  G+ S+A      M +    P+V+ +
Sbjct: 154 GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVF 213

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           +TL++ LCK  ++ EA + +  +   G++P+ ++Y ++I GLC   +       +  M++
Sbjct: 214 STLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD 273

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             ++P+    N ++D   + G ++ A  + D+M+  GV  NV T+NAL+        +  
Sbjct: 274 SKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV 333

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  +   M+      +V +YN LI   C +  +  A+ L++EM R+ +TP+ +TY  LI 
Sbjct: 334 AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIH 393

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G C  G +++A  +F ++   G   D + +R L     + +  DKA
Sbjct: 394 GLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKA 439



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 177/382 (46%), Gaps = 38/382 (9%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M  + P    +++N F +     N LD+AL  F+ M +    P+ V  N L+ ++ K   
Sbjct: 26  MLSLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKT-- 83

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
                            K  S +++ +  MDS+                    I  D+  
Sbjct: 84  -----------------KHHSTLLSLSRQMDSF-------------------GIPPDVYT 107

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
             ++IN  C    +  AF+   ++LK G  PD  T+ TL+  LC +GK+ EA H +  + 
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 167

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G  P+ ++Y T+I GLC  G+   A   L SM + +  P   +++ +ID   +   ++
Sbjct: 168 GEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            AF+I   M++ G+S N+ T+N+LI    +        +L  EM+   I PDVFT N ++
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 287

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            A C  G +  A  + D M+ RG+ P+++TY  L+ GHC R  +  A +VF  +      
Sbjct: 288 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 347

Query: 539 IDHIPFRILKKRYRRMKESDKA 560
            + I +  L   Y +++  DKA
Sbjct: 348 ANVISYNTLINGYCKIQSVDKA 369



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 121/272 (44%), Gaps = 39/272 (14%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E +   + A++   CL  ++  A+ +   M+ K  V +V+++N L+N  CKI  ++KA 
Sbjct: 311 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAM 370

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           ++  EMS    +PN  TYN  I G C V  L  A+ LF  M   G  P+ VT+  L   L
Sbjct: 371 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYL 430

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   L  A+  L  +   +      D+   T ++D   + G+   A  L++++  K +Q
Sbjct: 431 CKNRHLDKAMALLKAI---EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQM------------------------------- 322
            ++  YN++I+G C  G ++ A   F +M                               
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIEL 547

Query: 323 ----LKRGFLPDVITYNTLLNCLCKQGKLDEA 350
               L RGF  DV T   L+  L   G LD++
Sbjct: 548 LEEMLARGFSVDVSTTTLLVGMLSDDG-LDQS 578


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 215/426 (50%), Gaps = 3/426 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D      +IR LC+ GKIG AL L  KMI +G  P+V+T+  L+N LCK+G+   A  
Sbjct: 137 QPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIR 196

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++R M +    PN   ++  I   C+  ++ +A ++FS M   GI PN VT+N L+H LC
Sbjct: 197 LLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLC 256

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K          + E++   D K   DV T   ++D+  K G   +A  + + M  + ++ 
Sbjct: 257 KLCEWKHVTTLMNEMV---DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 313

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++V YN L++G CL  ++  A   F  M+ +  + +VI+YNTL+N  CK   +D+A + +
Sbjct: 314 NVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLF 373

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +S+  + P+ ++Y T+I GLC  G +  A      M+ +  +P+   +  + D   + 
Sbjct: 374 EEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKN 433

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
             L  A ++   +       ++  +  ++    R G + DA  L   +   G+ P+V+TY
Sbjct: 434 RHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTY 493

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N++I   C  G +  A +L+ EM + G +P+  TY  + +G           E+  ++  
Sbjct: 494 NIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLA 553

Query: 535 LGLAID 540
            G ++D
Sbjct: 554 RGFSVD 559



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 222/461 (48%), Gaps = 12/461 (2%)

Query: 87  FNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQ 146
           FN LD    E L     M    P   T+  D+ R   ++  +       T L L R+M  
Sbjct: 48  FNTLD----EALSTFNRMLHKQPPPSTV--DFNR---LLTSIAKTKHHSTLLSLSRQMDS 98

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
            G  PDV T   ++N LC +  ++ A   + ++ ++   P+  T+   I G C   ++ +
Sbjct: 99  FGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGE 158

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           ALHLF  M   G +PN VT+  L++ LCK G    A++ L  +   + G    +V+  + 
Sbjct: 159 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM---EQGNCQPNVVVFST 215

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+DS  K+    +A  ++++M  K I  +IV YN LI+G C   +         +M+   
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            +PDV T NT+++ LCK+G + EA     ++   GV P+ ++Y  ++ G C+  ++  A 
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 335

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           +   +M+ K  V     +N +I+GY +   +  A  + + M    ++ N  T+N LI   
Sbjct: 336 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 395

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + DA SL  EM+  G  PD+ TY  L    C   H+  A+ L   +      PDI
Sbjct: 396 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 455

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             YT ++ G C  G +++A ++F+ + + GL  +   + I+
Sbjct: 456 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIM 496



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 194/406 (47%), Gaps = 3/406 (0%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           +HN   ++      L++A      M   +P P+   +N  +T   +       L L   M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            + GI P+  T  I++++LC    +  A   L ++L         D  T T L+      
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGH---QPDATTFTTLIRGLCVE 153

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +AL L++ M  +  Q ++V Y  LING C  G+ S+A      M +    P+V+ +
Sbjct: 154 GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVF 213

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           +TL++ LCK  ++ EA + +  +   G++P+ ++Y ++I GLC   +       +  M++
Sbjct: 214 STLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD 273

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             ++P+    N ++D   + G ++ A  + D+M+  GV  NV T+NAL+        +  
Sbjct: 274 SKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV 333

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  +   M+      +V +YN LI   C +  +  A+ L++EM R+ +TP+ +TY  LI 
Sbjct: 334 AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIH 393

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G C  G +++A  +F ++   G   D + +R L     + +  DKA
Sbjct: 394 GLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKA 439



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 177/382 (46%), Gaps = 38/382 (9%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M  + P    +++N F +     N LD+AL  F+ M +    P+ V  N L+ ++ K   
Sbjct: 26  MLSLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKT-- 83

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
                            K  S +++ +  MDS+                    I  D+  
Sbjct: 84  -----------------KHHSTLLSLSRQMDSF-------------------GIPPDVYT 107

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
             ++IN  C    +  AF+   ++LK G  PD  T+ TL+  LC +GK+ EA H +  + 
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 167

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G  P+ ++Y T+I GLC  G+   A   L SM + +  P   +++ +ID   +   ++
Sbjct: 168 GEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            AF+I   M++ G+S N+ T+N+LI    +        +L  EM+   I PDVFT N ++
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 287

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            A C  G +  A  + D M+ RG+ P+++TY  L+ GHC R  +  A +VF  +      
Sbjct: 288 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 347

Query: 539 IDHIPFRILKKRYRRMKESDKA 560
            + I +  L   Y +++  DKA
Sbjct: 348 ANVISYNTLINGYCKIQSVDKA 369



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 121/272 (44%), Gaps = 39/272 (14%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E +   + A++   CL  ++  A+ +   M+ K  V +V+++N L+N  CKI  ++KA 
Sbjct: 311 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAM 370

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           ++  EMS    +PN  TYN  I G C V  L  A+ LF  M   G  P+ VT+  L   L
Sbjct: 371 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYL 430

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   L  A+  L  +   +      D+   T ++D   + G+   A  L++++  K +Q
Sbjct: 431 CKNRHLDKAMALLKAI---EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQM------------------------------- 322
            ++  YN++I+G C  G ++ A   F +M                               
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIEL 547

Query: 323 ----LKRGFLPDVITYNTLLNCLCKQGKLDEA 350
               L RGF  DV T   L+  L   G LD++
Sbjct: 548 LEEMLARGFSVDVSTTTLLVGMLSDDG-LDQS 578


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 216/445 (48%), Gaps = 4/445 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++RDL     +G    +   M++   VPDV T+  ++   CK+GD+ K   V+ EM E  
Sbjct: 213 LMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKE 271

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYNAFI G C+   +D+AL +   M   G+ P+  T+ +LV   CK+    +A 
Sbjct: 272 CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEA- 330

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K + E +         +  T T L+D + K G+  +AL + ++M  + ++ ++V YN +I
Sbjct: 331 KLIFESMPSSG--LNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G    G+++ A + F +ML  G  PD  TYN L++   K   + +A      +    + 
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLT 448

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P   +Y  +I GLC   D+ KA E L  M+   V P   ++  +I  Y +      A  +
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
             +M++ GV  ++F +N LI+   R   + +A  L  +M   GI P+  TY   I     
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G I +A + + +ML  GI P+ + YT LIKGHC  GN  EA   F  +   GL  D   
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 544 FRILKKRYRRMKESDKARDIHQKWL 568
           +  +     +  ++ +A  +  K+L
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFL 653



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 218/462 (47%), Gaps = 40/462 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A I  LC  G +  AL +++ M++KG  PD  T+  LV+  CK    ++A  +   M   
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +PN  TY A I G+ +   +++AL +   M   G++ N VT+N ++  + K G +  A
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E+L         D  T  +L+D Y K+ D  +A  L  +M  + +      Y+VL
Sbjct: 401 MSLFNEMLM---AGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVL 457

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C + D+  A     QM++ G  P+V  Y TL+    ++ + + A     ++   GV
Sbjct: 458 ISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGV 517

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH-------------------- 402
            PD   Y  +I GLC    + +A+  L+ M EK + P  H                    
Sbjct: 518 LPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAER 577

Query: 403 ---------------IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
                          I+ ++I G+   G+   A S    ML  G+  ++  ++A+I + +
Sbjct: 578 YFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLS 637

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G   +A  +  + L  G+ PDVF YN LI   C  G I  A QLYDEML  GI P+I+
Sbjct: 638 KNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIV 697

Query: 508 TYTELIK--GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            Y  LI   G+C  GN+ EA ++F ++ + G++ D   + IL
Sbjct: 698 VYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCIL 739



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 228/452 (50%), Gaps = 6/452 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC    +  A  +  +MI+ G  P+V  +  L+    +    E A  +++ M 
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+   YN  I G CR  ++++A  L   M   GI+PN  T+   ++   K G + 
Sbjct: 514 ANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQ 573

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A ++  ++L+   G   ++VI  TIL+  +   G+  +AL+ +  M +K +  DI AY+
Sbjct: 574 VAERYFKDMLSS--GIVPNNVIY-TILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYS 630

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I+    NG    A   F + LK G +PDV  YN+L++  CK+G +++AS  Y  +   
Sbjct: 631 AIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN 690

Query: 361 GVAPDQISYKTIIQ--GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           G+ P+ + Y T+I   G C  G++ +A +    M+ K + P+ +I+ ++IDG G+ G+L 
Sbjct: 691 GINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLE 750

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A S+        V S +  FN+LI +  + G + +A  L  +M+   + P++ TY +LI
Sbjct: 751 KALSLFHEAQQKSVGS-LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILI 809

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            A      +  A QL+ +M  R I P+ +TYT L+  +   GN  +   +F  ++  G+A
Sbjct: 810 DAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIA 869

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            D I + ++   Y +  +S +A  +  K L+ 
Sbjct: 870 CDAIAYGVMASAYCKEGKSLEALKLLNKSLVE 901



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 207/463 (44%), Gaps = 39/463 (8%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L + MI  G +PD+  +N L+  LC+   +E+A  ++ +M E    PN  TY AFI 
Sbjct: 505 AIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFIN 564

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            Y +  E+  A   F  M ++GI PN V + IL+   C    +G+ V+ L       +  
Sbjct: 565 LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCD---VGNTVEALSTFKCMLEKG 621

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D+   + ++ S  KNG   +A+ ++    +  +  D+  YN LI+GFC  GDI  A 
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681

Query: 317 AYFCQMLKRGFLPDVITYNTLLN--CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
             + +ML  G  P+++ YNTL+N    CK G L EA   +  +   G++PD   Y  +I 
Sbjct: 682 QLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILID 741

Query: 375 G----------------------------------LCIHGDIVKAREFLLSMLEKSVVPE 400
           G                                   C HG +++ARE    M++K + P 
Sbjct: 742 GCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPN 801

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              + ++ID YG+   +  A  +   M +  +  N  T+ +L+L+  + G+ F   SL K
Sbjct: 802 IVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFK 861

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           +M   GI  D   Y ++  A C  G    AL+L ++ L  GI  +   +  LI   C   
Sbjct: 862 DMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEK 921

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            +    E+ +++    L++       L   + +    D+A  +
Sbjct: 922 QISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKV 964



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 203/441 (46%), Gaps = 26/441 (5%)

Query: 139 WLRRKMIQKGTVPDVL-THNYLVNELCKIGDLEKADHVIREMSEMRPSP----------- 186
           W   KM    + P  L +++ L   LC  G + +AD+++ ++ + R  P           
Sbjct: 109 WSSSKM----STPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCY 164

Query: 187 ------NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                 N   ++ FI  +  +  L++A  +F    + G  P  +  N L+  L K  ++G
Sbjct: 165 REFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMG 224

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
              K  G ++   + K   DV T T ++ ++ K GD  +   + ++M +K  + ++  YN
Sbjct: 225 LFWKVYGSMV---EAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYN 280

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
             I G C  G +  A      M+++G  PD  TY  L++  CKQ +  EA   +  +  +
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P++ +Y  +I G    G+I +A      M+ + +      +N +I G  + G+++ A
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
            S+ + ML  G+  + +T+N LI    +   +  A  L  EM    + P  FTY++LI  
Sbjct: 401 MSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C+   +  A ++ D+M+R G+ P++  Y  LIK +      + A E+   +   G+  D
Sbjct: 461 LCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520

Query: 541 HIPFRILKKRYRRMKESDKAR 561
              +  L     R K+ ++A+
Sbjct: 521 LFCYNCLIIGLCRAKKVEEAK 541



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 193/418 (46%), Gaps = 41/418 (9%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+  C  G    AL   + M++KG +PD+  ++ +++ L K G  ++A  V  +  
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV--HALCKKGL 238
           +    P+   YN+ I+G+C+  +++KA  L+  M +NGI PN V +N L+  +  CK G 
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGN 713

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L +A K   E+++      + D     IL+D   K G+  +AL+L+++  QK++ + + A
Sbjct: 714 LTEAFKLFDEMISKG---ISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGS-LSA 769

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           +N LI+ FC +G +  A   F  M+ +   P+++TY  L++   K   ++EA   +    
Sbjct: 770 FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF---- 825

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
                                          L M  ++++P    +  ++  Y + G+  
Sbjct: 826 -------------------------------LDMETRNIIPNTLTYTSLLLSYNQIGNRF 854

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
              S+   M + G++ +   +  +  A  + G   +A  L  + L++GI  +   ++ LI
Sbjct: 855 KMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALI 914

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
              C    I   L+L  EM +  ++    T   L+ G    GN  EA +V   +Q LG
Sbjct: 915 FHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLG 972



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 168/366 (45%), Gaps = 10/366 (2%)

Query: 92  LILKENLDRLKTMRDTGPVRCTLE----TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           +++K + D   T+      +C LE     D R + A+I  L   GK   A+ +  K ++ 
Sbjct: 596 ILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKT 655

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT--GYCRVNELD 205
           G VPDV  +N L++  CK GD+EKA  +  EM     +PN   YN  I   GYC+   L 
Sbjct: 656 GVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLT 715

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +A  LF  M + GI P+   + IL+    K+G L  A+    E       K+   +    
Sbjct: 716 EAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEA----QQKSVGSLSAFN 771

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            L+DS+ K+G   +A  L++DM  K +  +IV Y +LI+ +     +  A   F  M  R
Sbjct: 772 SLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETR 831

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
             +P+ +TY +LL    + G   +    +  +   G+A D I+Y  +    C  G  ++A
Sbjct: 832 NIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEA 891

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            + L   L + +  E  +++ +I    +   +S    +   M    +S +  T N L+L 
Sbjct: 892 LKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLG 951

Query: 446 ETRGGS 451
             + G+
Sbjct: 952 FYKSGN 957



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 143/313 (45%), Gaps = 37/313 (11%)

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
           +++  +++ I+ F + G ++ A + F   +  GF P +I  N L+  L K   +      
Sbjct: 170 SNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKV 229

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           YG + +  + PD  +Y  +I+  C  GD++K +  +LS +EK   P    +N  I G  +
Sbjct: 230 YGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGK-MVLSEMEKECKPNLFTYNAFIGGLCQ 288

Query: 414 CGDLSNAFSIRDLML-----------------------------------SFGVSSNVFT 438
            G +  A  ++ LM+                                   S G++ N FT
Sbjct: 289 TGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFT 348

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           + ALI    + G+I +A  +K EM+  G+  +V TYN +IG     G +  A+ L++EML
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML 408

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             GI PD  TY  LI G+    +M +A E+ A+++   L      + +L        +  
Sbjct: 409 MAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468

Query: 559 KARDIHQKWLLRN 571
           KA ++  + ++RN
Sbjct: 469 KANEVLDQ-MIRN 480


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 213/435 (48%), Gaps = 4/435 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC+  +I  A+ L  KM      P V T+  L+  LC      +A ++++EM 
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TY   I   C   + +KA  L   M   G+ PN +T+N L++  CK+G++ 
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DAV  + E++  +  K + +  T   L+  Y K+ +  +A+ + N M ++ +  D+V YN
Sbjct: 411 DAVDVV-ELM--ESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYN 466

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G C +G+  SA+     M  RG +PD  TY ++++ LCK  +++EA   +  L + 
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GV P+ + Y  +I G C  G + +A   L  ML K+ +P    +N +I G    G L  A
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + M+  G+   V T   LI    + G    A+S  ++ML  G  PD  TY   I  
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  G +  A  +  +M   G++PD+ TY+ LIKG+   G    A +V  +++  G    
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPS 706

Query: 541 HIPFRILKKRYRRMK 555
              F  L K    MK
Sbjct: 707 QHTFLSLIKHLLEMK 721



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 228/435 (52%), Gaps = 17/435 (3%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M++    P++ T+N +VN  CK+G++E+A+  + ++ E    P+  TY + I GYC+  
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +LD A  +F+ M   G R N V +  L+H LC    + +A+    + + DD+   T  V 
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVK-MKDDECFPT--VR 324

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T T+L+ S   +  K +AL L  +M +  I+ +I  Y VLI+  C       A     QM
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L++G +P+VITYN L+N  CK+G +++A     ++    ++P+  +Y  +I+G C   ++
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNV 443

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA   L  MLE+ V+P+   +N +IDG  R G+  +A+ +  LM   G+  + +T+ ++
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I +  +   + +A  L   +   G+ P+V  Y  LI   C  G +  A  + ++ML +  
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL----AIDHIPF-RILK--------K 549
            P+ +T+  LI G CA G +KEA  +  K+  +GL    + D I   R+LK         
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623

Query: 550 RYRRMKESDKARDIH 564
           R+++M  S    D H
Sbjct: 624 RFQQMLSSGTKPDAH 638



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 235/487 (48%), Gaps = 28/487 (5%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E L+ +K M +TG     ++ +   +  +I  LC   K   A  L  +M++KG +P+V+T
Sbjct: 341 EALNLVKEMEETG-----IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +N L+N  CK G +E A  V+  M   + SPN  TYN  I GYC+ N + KA+ + + M 
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML 454

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
              + P+ VT+N L+   C+ G    A + L   L +D G    D  T T ++DS  K+ 
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS--LMNDRG-LVPDQWTYTSMIDSLCKSK 511

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
              +A  L++ + QK +  ++V Y  LI+G+C  G +  A     +ML +  LP+ +T+N
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFN 571

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            L++ LC  GKL EA+     + K G+ P   +   +I  L   GD   A      ML  
Sbjct: 572 ALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS 631

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
              P+ H +   I  Y R G L +A  +   M   GVS ++FT+++LI      G    A
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIG------------------ASCNLGHIHLALQLYDEM 497
           F + K M   G  P   T+  LI                   A  N+      ++L ++M
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM 751

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ-TLGLAIDHIPFRILKKRYRRMKE 556
           +   +TP+  +Y +LI G C  GN++ AE+VF  +Q   G++   + F  L     ++K+
Sbjct: 752 VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKK 811

Query: 557 SDKARDI 563
            ++A  +
Sbjct: 812 HNEAAKV 818



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 188/381 (49%), Gaps = 4/381 (1%)

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  +    R   +D+   ++  M  + + PN  T+N +V+  CK G + +A +++ +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
              +     D  T T L+  Y +  D   A  ++N+M  K  + + VAY  LI+G C+  
Sbjct: 246 ---EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            I  A   F +M      P V TY  L+  LC   +  EA +    + +TG+ P+  +Y 
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +I  LC      KARE L  MLEK ++P    +N +I+GY + G + +A  + +LM S 
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
            +S N  T+N LI    +  ++  A  +  +ML   + PDV TYN LI   C  G+   A
Sbjct: 423 KLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
            +L   M  RG+ PD  TYT +I   C    ++EA ++F  ++  G+  + + +  L   
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541

Query: 551 YRRMKESDKARDIHQKWLLRN 571
           Y +  + D+A  + +K L +N
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKN 562



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 146/337 (43%), Gaps = 16/337 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC  GK+  A  L  KM++ G  P V T   L++ L K GD + A    ++M   
Sbjct: 572 ALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS 631

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA---LCKKGLL 239
              P+  TY  FI  YCR   L  A  + + M  NG+ P+  T++ L+     L +    
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN------------DM 287
            D +K + +   +        +I   + M    + G + +  A+ N             M
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM 751

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGK 346
            + ++  +  +Y  LI G C  G++  A   F  M +  G  P  + +N LL+C CK  K
Sbjct: 752 VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKK 811

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
            +EA+     +   G  P   S K +I GL   G+  +      ++L+     +   W +
Sbjct: 812 HNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKI 871

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           IIDG G+ G +   + + ++M   G   +  T++ LI
Sbjct: 872 IIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/294 (20%), Positives = 120/294 (40%), Gaps = 25/294 (8%)

Query: 100 RLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYL 159
           R + M  +G      + D   +   I+  C  G++  A  +  KM + G  PD+ T++ L
Sbjct: 624 RFQQMLSSGT-----KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678

Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT------------------GYCRV 201
           +     +G    A  V++ M +    P+  T+ + I                       +
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            E D  + L   M  + + PN  ++  L+  +C+ G L  A K     +  ++G + S++
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH-MQRNEGISPSEL 797

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           + +  L+    K     +A  + +DM        + +  VLI G    G+     + F  
Sbjct: 798 VFNA-LLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           +L+ G+  D + +  +++ + KQG ++     + V+ K G      +Y  +I+G
Sbjct: 857 LLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 229/463 (49%), Gaps = 23/463 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC+  +I  AL L  +M +    P+V+T   L+N LC+ G + +A  ++  M E 
Sbjct: 153 TLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLED 208

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMAN-NGIRPNRVT-----HNILVHALCKK 236
              PN  TY   + G C++ +   AL+L   M   + I+PN V         +++  C  
Sbjct: 209 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSS 268

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G   +A + L E+L  +  K + DV+T   L++++ K G  F+A  L+++M  + I    
Sbjct: 269 GRWSEAQQLLQEML--ERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPST 326

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + Y+ +I+GFC    + +A   F  M  +G  PD+IT+NTL+   C+  ++D+       
Sbjct: 327 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHE 386

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +++ G+  + I+Y T+I G C  GD+  A++ L  M+   V P     N ++DG    G 
Sbjct: 387 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGK 446

Query: 417 LSNAFSIRDLMLSF-----------GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
           L +A  +   M              GV  +V T+N LI      G   +A  L +EM   
Sbjct: 447 LKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 506

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           GI PD  TYN +I   C    +  A Q++D M  +  +P+++T+T LI G+C  G + + 
Sbjct: 507 GIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 566

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            E+F ++   G+  + I +  L   +R++   + A DI Q+ +
Sbjct: 567 LELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMM 609



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 224/457 (49%), Gaps = 23/457 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++  C   K+  AL    K+ + G  P V+T + L++ LC    + +A  +  +M +  
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK-- 176

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T+   + G CR   + +A+ L   M  +G++PN++T+  +V  +CK G    A+
Sbjct: 177 --PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 244 KFLGEVLADDDGKATSDVIT-----STILMDSYFKNGDKFQALALWNDMFQ-KNIQTDIV 297
             L ++  ++      +V+       T +++ +  +G   +A  L  +M + K I  D+V
Sbjct: 235 NLLRKM--EEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVV 292

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            YN LIN F   G    A   + +ML RG +P  ITY+++++  CKQ +LD A H + ++
Sbjct: 293 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLM 352

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
           +  G +PD I++ T+I G C    +    + L  M E  +V     +  +I G+ + GDL
Sbjct: 353 ATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 412

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML-----------LDG 466
           + A  +   M+S GV  NV T N L+      G + DA  + K M             +G
Sbjct: 413 NAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNG 472

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           + PDV TYN+LI    N G    A +LY+EM  RGI PD ITY  +I G C +  + EA 
Sbjct: 473 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEAT 532

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           ++F  + +   + + + F  L   Y +    D   ++
Sbjct: 533 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL 569



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 196/427 (45%), Gaps = 50/427 (11%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIR 177
            R   +I   C  G+   A  L ++M+++  + PDV+T+N L+N   K G   +A+ +  
Sbjct: 256 ERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYD 315

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           EM      P+  TY++ I G+C+ N LD A H+F  MA  G  P+ +T N L+   C+  
Sbjct: 316 EMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAK 375

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            + D +K                                      L ++M +  +  + +
Sbjct: 376 RVDDGIK--------------------------------------LLHEMTEAGLVANTI 397

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            Y  LI+GFC  GD+++A     +M+  G  P+V+T NTLL+ LC  GKL +A   +  +
Sbjct: 398 TYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 457

Query: 358 SKT-----------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
            K+           GV PD  +Y  +I GL   G  ++A E    M  + +VP+   +N 
Sbjct: 458 QKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNS 517

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +I G  +   L  A  + D M S   S NV TF  LI    + G + D   L  EM   G
Sbjct: 518 VIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 577

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           I  +  TY  LI     +G+I+ AL ++ EM+  G+ PD IT   ++ G  ++  +K A 
Sbjct: 578 IVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAV 637

Query: 527 EVFAKIQ 533
            +   +Q
Sbjct: 638 AMLEDLQ 644



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 212/485 (43%), Gaps = 50/485 (10%)

Query: 64  CRSKTRHWFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVA 123
           C    RH  + K  D E      F    L L+     +K + D                 
Sbjct: 23  CTRSIRHALAKKSRDGESG----FGGESLKLRSGFHEIKGLED----------------- 61

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
                        A+ L   M++   +P V+    L+  + ++G L+    + R+M EMR
Sbjct: 62  -------------AIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKM-EMR 107

Query: 184 PSP-NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             P N  ++   +  +C  ++L  AL  F  +   G  P  VT + L+H LC +  + +A
Sbjct: 108 RVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEA 167

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    ++          +V+T T LM+   + G   +A+AL + M +  +Q + + Y  +
Sbjct: 168 LDLFHQM-------CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTI 220

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFL-PDVITY-----NTLLNCLCKQGKLDEASHFYG- 355
           ++G C  GD  SA     +M +   + P+V+ +       ++N  C  G+  EA      
Sbjct: 221 VDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQE 280

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
           +L +  ++PD ++Y  +I      G   +A E    ML + ++P    ++ +IDG+ +  
Sbjct: 281 MLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQN 340

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            L  A  +  LM + G S ++ TFN LI    R   + D   L  EM   G+  +  TY 
Sbjct: 341 RLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYT 400

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            LI   C +G ++ A  L  EM+  G+ P+++T   L+ G C  G +K+A E+F  +Q  
Sbjct: 401 TLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKS 460

Query: 536 GLAID 540
            + ID
Sbjct: 461 KMDID 465



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 174/363 (47%), Gaps = 27/363 (7%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +L+E L+R K           +  D   + A+I      GK   A  L  +M+ +G +P 
Sbjct: 277 LLQEMLERKK-----------ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPS 325

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
            +T++ +++  CK   L+ A+H+   M+    SP+  T+N  I GYCR   +D  + L  
Sbjct: 326 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 385

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M   G+  N +T+  L+H  C+ G L  A   L E+++        +V+T   L+D   
Sbjct: 386 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSG---VCPNVVTCNTLLDGLC 442

Query: 273 KNGDKFQALALWNDMFQKN------------IQTDIVAYNVLINGFCLNGDISSAFAYFC 320
            NG    AL ++  M QK+            ++ D+  YN+LI+G    G    A   + 
Sbjct: 443 DNGKLKDALEMFKAM-QKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 501

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +M  RG +PD ITYN++++ LCKQ +LDEA+  +  +     +P+ +++ T+I G C  G
Sbjct: 502 EMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 561

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            +    E    M  + +V     +  +I G+ + G+++ A  I   M++ GV  +  T  
Sbjct: 562 RVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIR 621

Query: 441 ALI 443
            ++
Sbjct: 622 NML 624



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 157/327 (48%), Gaps = 14/327 (4%)

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L DA+   G+++     +    VI    LM    + G     ++L   M  + +  +  +
Sbjct: 59  LEDAIDLFGDMVRS---RPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYS 115

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           + +L+  FC    +  A + F ++ K GF P V+T++TLL+ LC + ++ EA   +  + 
Sbjct: 116 FTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMC 175

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           K    P+ +++ T++ GLC  G +V+A   L  MLE  + P    +  I+DG  + GD  
Sbjct: 176 K----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 231

Query: 419 NAFS-IRDLMLSFGVSSNVFTF-----NALILAETRGGSIFDAFSLKKEML-LDGIFPDV 471
           +A + +R +     +  NV  +       +I      G   +A  L +EML    I PDV
Sbjct: 232 SALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDV 291

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TYN LI A    G    A +LYDEML RGI P  ITY+ +I G C +  +  AE +F  
Sbjct: 292 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYL 351

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESD 558
           + T G + D I F  L   Y R K  D
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVD 378


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 223/444 (50%), Gaps = 10/444 (2%)

Query: 88  NALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           + LD +L EN  ++  M      R   E +   +  +++ LC   K+  A  L  +M  K
Sbjct: 151 HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 210

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  PD +++  +++ +C++G +++     RE++E R  P  + YNA I G C+ ++   A
Sbjct: 211 GCCPDAVSYTTVISSMCEVGLVKEG----RELAE-RFEPVVSVYNALINGLCKEHDYKGA 265

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M   GI PN ++++ L++ LC  G +  A  FL ++L         ++ T + L
Sbjct: 266 FELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG---CHPNIYTLSSL 322

Query: 268 MDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +   F  G  F AL LWN M +   +Q ++VAYN L+ GFC +G+I  A + F  M + G
Sbjct: 323 VKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P++ TY +L+N   K+G LD A + +  +  +G  P+ + Y  +++ LC H    +A 
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAE 442

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILA 445
             +  M +++  P    +N  I G    G L  A  + R +        N+ T+N L+  
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             +   I +A+ L +E+ + G+     TYN L+  SCN G   +ALQL  +M+  G +PD
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPD 562

Query: 506 IITYTELIKGHCARGNMKEAEEVF 529
            IT   +I  +C +G  + A ++ 
Sbjct: 563 EITMNMIILAYCKQGKAERAAQML 586



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 215/479 (44%), Gaps = 48/479 (10%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           ++V R + L  +   A+ +  ++ + G  P V  +N++++ L     ++    V R+M  
Sbjct: 118 ISVYRQVGLAER---AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKR 174

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               PN  TYN  +   C+ N++D A  L   M+N G  P+ V++  ++ ++C+ GL+ +
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE 234

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
                G  LA+   +    V     L++   K  D   A  L  +M +K I  ++++Y+ 
Sbjct: 235 -----GRELAE---RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN-CLCKQGKLDEASHFYGVLSKT 360
           LIN  C +G I  AF++  QMLKRG  P++ T ++L+  C  +    D    +  ++   
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+ ++Y T++QG C HG+IVKA      M E    P    +  +I+G+ + G L  A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM------------------ 462
             I + ML+ G   NV  +  ++ A  R     +A SL + M                  
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466

Query: 463 LLDG--------IF----------PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           L D         +F          P++ TYN L+        I  A  L  E+  RG+  
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 526

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
              TY  L+ G C  G    A ++  K+   G + D I   ++   Y +  ++++A  +
Sbjct: 527 SSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 189/412 (45%), Gaps = 9/412 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +IR L + G++ +  +L ++M  +G          +++   ++G  E+A  +   + E 
Sbjct: 81  VMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEF 140

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   YN  +      N +     ++  M  +G  PN  T+N+L+ ALCK   +  A
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 200

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K L E+    +     D ++ T ++ S  + G     L        +  +  +  YN L
Sbjct: 201 KKLLVEM---SNKGCCPDAVSYTTVISSMCEVG-----LVKEGRELAERFEPVVSVYNAL 252

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING C   D   AF    +M+++G  P+VI+Y+TL+N LC  G+++ A  F   + K G 
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYGRCGDLSNAF 421
            P+  +  ++++G  + G    A +    M+    + P    +N ++ G+   G++  A 
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           S+   M   G S N+ T+ +LI    + GS+  A  +  +ML  G  P+V  Y  ++ A 
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEAL 432

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           C       A  L + M +    P + T+   IKG C  G +  AE+VF +++
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 484



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 206/472 (43%), Gaps = 63/472 (13%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV-IREMSEMRP--SPNCA 189
           K G +L L+   +QK  +P VL  N  VN L      E  +H  I+E+  ++     +C 
Sbjct: 4   KEGCSLLLK---VQKPLIPFVLNTNLNVNHLLT----ESPNHAEIKELDVVKRLRQESCV 56

Query: 190 TYNAFITGYCRVNELDKALHLFSTMAN-NGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
                            ALH F ++AN N  +   +T  +++  L   G + D+V++L +
Sbjct: 57  PL---------------ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQV-DSVQYLLQ 100

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
            +       + D+  S I    Y + G   +A+ ++  + +      +  YN +++    
Sbjct: 101 QMKLQGFHCSEDLFISVI--SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLG 158

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
              I   +  +  M + GF P+V TYN LL  LCK  K+D A      +S  G  PD +S
Sbjct: 159 ENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVS 218

Query: 369 YKTIIQ------------------------------GLCIHGDIVKAREFLLSMLEKSVV 398
           Y T+I                               GLC   D   A E +  M+EK + 
Sbjct: 219 YTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGIS 278

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P    ++ +I+     G +  AFS    ML  G   N++T ++L+      G+ FDA  L
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338

Query: 459 KKEMLLD-GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
             +M+   G+ P+V  YN L+   C+ G+I  A+ ++  M   G +P+I TY  LI G  
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKESDKARDIHQK 566
            RG++  A  ++ K+ T G   + + +  + +   R+ + KE++   +I  K
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSK 450



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 145/326 (44%), Gaps = 38/326 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           ++++   L G    AL L  +MI+  G  P+V+ +N LV   C  G++ KA  V   M E
Sbjct: 321 SLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE 380

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
           +  SPN  TY + I G+ +   LD A+++++ M  +G  PN V +  +V ALC+     +
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE 440

Query: 242 AVKFLGEVLADDD----------------------------------GKATSDVITSTIL 267
           A   + E+++ ++                                   +   +++T   L
Sbjct: 441 AESLI-EIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNEL 499

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D   K     +A  L  ++F + ++     YN L++G C  G    A     +M+  G 
Sbjct: 500 LDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGK 559

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLS--KTGVAPDQISYKTIIQGLCIHGDIVKA 385
            PD IT N ++   CKQGK + A+    ++S  +    PD ISY  +I GLC        
Sbjct: 560 SPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDG 619

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGY 411
              L  M+   +VP    W+V+I+ +
Sbjct: 620 VILLERMISAGIVPSIATWSVLINCF 645



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 3/198 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVP-DVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           A I+ LC  G++  A  + R+M Q+   P +++T+N L++ L K   +E+A  + RE+  
Sbjct: 462 AFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFM 521

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
                + +TYN  + G C       AL L   M  +G  P+ +T N+++ A CK+G    
Sbjct: 522 RGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAER 581

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A + L ++++    K   DVI+ T ++    ++  +   + L   M    I   I  ++V
Sbjct: 582 AAQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSV 640

Query: 302 LINGFCLNGDISSAFAYF 319
           LIN F L+ DI  A   F
Sbjct: 641 LINCFILD-DIVRAHDQF 657


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 232/462 (50%), Gaps = 6/462 (1%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D L+ M + G V C+   D   +  VI      G +  A  L ++M+Q+G  PD++T++ 
Sbjct: 207 DLLRMMAEGGAV-CS--PDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSS 263

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           +V+ LCK   + KA+  +R+M      P+  TYN  I GY    +  +A+ +F  M  + 
Sbjct: 264 VVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 323

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           I P+ VT N+L+ +LCK G + +A      +          DV +  I+++ Y   G   
Sbjct: 324 ILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQ---NPDVFSYKIMLNGYATKGCLV 380

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
               L++ M    I  DI  ++VLI  +   G +  A   F +M   G  PDV+TY T++
Sbjct: 381 DMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVI 440

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             LC+ GK+D+A   +  +   GVAPD+ +Y  +IQG C HG ++KA+E +L ++   + 
Sbjct: 441 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMR 500

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
            +   ++ II+   + G + +A +I DL ++ G   +   ++ L+      G +  A  +
Sbjct: 501 LDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRV 560

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
              M+  GI P+V  Y  L+   C +G I   L L+ EML++GI P  I Y  +I G   
Sbjct: 561 FDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFV 620

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            G    A+  F ++   G+AI+   + I+ + + + +  D+A
Sbjct: 621 AGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEA 662



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 189/354 (53%), Gaps = 2/354 (0%)

Query: 192 NAFITGYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           N  + G+C     D+AL  L       G  P+  +++IL+ +LC +G  G A   L  ++
Sbjct: 154 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL-RMM 212

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
           A+     + DV+  T ++D +FK GD  +A  L+ +M Q+ I  D+V Y+ +++  C   
Sbjct: 213 AEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKAR 272

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A A+  QM+ +G LPD  TYN L+      G+  EA   +  + +  + PD ++  
Sbjct: 273 AMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLN 332

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            ++  LC +G I +AR+   +M  K   P+   + ++++GY   G L +   + DLML  
Sbjct: 333 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGD 392

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G++ +++TF+ LI A    G +  A  +  EM   G+ PDV TY  +I A C +G +  A
Sbjct: 393 GIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDA 452

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           ++ +++M+ +G+ PD   Y  LI+G C  G++ +A+E+  +I   G+ +D + F
Sbjct: 453 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFF 506



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 218/448 (48%), Gaps = 6/448 (1%)

Query: 124 VIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  C   +   AL  L  +  + G VPDV +++ L+  LC  G   +AD ++R M+E 
Sbjct: 156 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 215

Query: 183 RP--SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               SP+   Y   I  + +  +++KA  LF  M   GI P+ VT++ +VHALCK   +G
Sbjct: 216 GAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMG 275

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A  FL +++   +     D  T   L+  Y   G   +A+ ++ +M + +I  D+V  N
Sbjct: 276 KAEAFLRQMV---NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLN 332

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +L+   C  G I  A   F  M  +G  PDV +Y  +LN    +G L + +  + ++   
Sbjct: 333 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGD 392

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+APD  ++  +I+     G + KA      M +  V P+   +  +I    R G + +A
Sbjct: 393 GIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDA 452

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
               + M+  GV+ + + ++ LI      GS+  A  L  E++ +G+  D+  ++ +I  
Sbjct: 453 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINN 512

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C LG I  A  ++D  +  G  PD + Y+ L+ G+C  G M++A  VF  + + G+  +
Sbjct: 513 LCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 572

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWL 568
            + +  L   Y ++   D+   + ++ L
Sbjct: 573 VVVYGTLVNGYCKIGRIDEGLSLFREML 600



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 188/414 (45%), Gaps = 8/414 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           KE +   K MR     R ++  D      ++  LC  GKI  A  +   M  KG  PDV 
Sbjct: 310 KEAVRVFKEMR-----RHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 364

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           ++  ++N     G L     +   M     +P+  T++  I  Y     LDKA+ +F+ M
Sbjct: 365 SYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEM 424

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            ++G++P+ VT+  ++ ALC+ G + DA++   +++   D     D      L+  +  +
Sbjct: 425 RDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMI---DQGVAPDKYAYHCLIQGFCTH 481

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +A  L  ++    ++ DIV ++ +IN  C  G I  A   F   +  G  PD + Y
Sbjct: 482 GSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVY 541

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           + L++  C  GK+++A   +  +   G+ P+ + Y T++ G C  G I +       ML+
Sbjct: 542 SMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQ 601

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K + P   ++N+IIDG    G    A      M   G++ N  T+N ++    +     +
Sbjct: 602 KGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDE 661

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
           A  L KE+    +  D+ T N +I        +  A  L+  + R G+ P ++T
Sbjct: 662 AIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 146/301 (48%), Gaps = 3/301 (0%)

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T  ILMD   +      ALA +  + +  ++ DI+  N L+ GFC       A       
Sbjct: 117 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHR 176

Query: 323 LKR-GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV--APDQISYKTIIQGLCIH 379
               G +PDV +Y+ LL  LC QGK  +A     ++++ G   +PD ++Y T+I      
Sbjct: 177 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKE 236

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           GD+ KA +    M+++ + P+   ++ ++    +   +  A +    M++ GV  + +T+
Sbjct: 237 GDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTY 296

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N LI   +  G   +A  + KEM    I PDV T N+L+G+ C  G I  A  ++D M  
Sbjct: 297 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAM 356

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
           +G  PD+ +Y  ++ G+  +G + +  ++F  +   G+A D   F +L K Y      DK
Sbjct: 357 KGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDK 416

Query: 560 A 560
           A
Sbjct: 417 A 417



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 42/263 (15%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT---GVAPDQISYKT 371
           A A+F Q+L+ G   D+I  N LL   C+  + DEA     +L +T   G  PD  SY  
Sbjct: 134 ALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI--LLHRTPELGCVPDVFSYSI 191

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLS 429
           +++ LC  G   +A + L  M E   V  P +  +  +ID + + GD++ A         
Sbjct: 192 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACD------- 244

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
                                       L KEM+  GI PD+ TY+ ++ A C    +  
Sbjct: 245 ----------------------------LFKEMVQRGIPPDLVTYSSVVHALCKARAMGK 276

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A     +M+ +G+ PD  TY  LI G+ + G  KEA  VF +++   +  D +   +L  
Sbjct: 277 AEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMG 336

Query: 550 RYRRMKESDKARDIHQKWLLRNK 572
              +  +  +ARD+     ++ +
Sbjct: 337 SLCKYGKIKEARDVFDTMAMKGQ 359


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 217/462 (46%), Gaps = 38/462 (8%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR   E DY  +   I  LC   ++  A  L +KM +K  +P  +T+  LV+ L K G L
Sbjct: 34  VRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRL 93

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  V+ +M E   SP   TY   I G  +   +++A  +F  M  NG RP+   +  L
Sbjct: 94  DEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTAL 153

Query: 230 VHALCKKGLLGDAVKFLGEVLA-DDDGKATSDVITSTILMDSYFKNGDKFQALALWND-M 287
           +  LCK G   +A     E  A      A  DV+T T L+D   K G   +A  +++D  
Sbjct: 154 IKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEA 213

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV---------------- 331
            ++    D V Y  +I+G C  G +      F +M  RG+ PD                 
Sbjct: 214 VERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMI 273

Query: 332 -------------------ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
                              +TYN +L+ LCK G++ EA   +  + + G     ++Y  +
Sbjct: 274 PKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSAL 333

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           + G C  G++  A E    ML++   P    +N+II G  R G L+ A+   + +L   +
Sbjct: 334 MDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRL 393

Query: 433 SSNVFTFNALILAE-TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
             +V+TFNA +     R  ++ D   L + M+  G  P++ +Y++L+   C  G + +AL
Sbjct: 394 CPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVAL 453

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +++ EM+ RG+ PD++ +  LI+  C  G + EA EVF +++
Sbjct: 454 EIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELE 495



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 219/454 (48%), Gaps = 9/454 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC   ++  A  +  + ++ G  PD +T+N  ++ LCK   ++ A  ++++M E +
Sbjct: 13  VINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKK 72

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P   TY A + G  +   LD+A+ +   M   G  P   T+ +++  L K G + +A 
Sbjct: 73  CLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEAR 132

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT----DIVAY 299
           +   ++L +       D    T L+    K+G   +A AL+ +   +        D+V Y
Sbjct: 133 RIFVDMLGNG---CRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTY 189

Query: 300 NVLINGFCLNGDISSAFAYFC-QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
             LI+G C  G I  A   F  + ++RGF+PD +TY ++++ LCK G+++E    +  + 
Sbjct: 190 TSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 249

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G  PD ++Y  +I G      I KA      ML+   V     +N+I+DG  + G ++
Sbjct: 250 NRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVA 309

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A++    M   G  + V T++AL+      G++  A  L + ML  G  P++ +YN++I
Sbjct: 310 EAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIII 369

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR-GNMKEAEEVFAKIQTLGL 537
              C  G +  A   ++++L+R + PD+ T+   + G C R   + +  E+F  + + G 
Sbjct: 370 RGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGT 429

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           + +   + IL     R    + A +I ++ + R 
Sbjct: 430 SPNLHSYSILMDGICRAGGLEVALEIFREMVSRG 463



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 207/429 (48%), Gaps = 10/429 (2%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           + +  VI  L   G++  A  +   M+  G  PD   +  L+  LCK G  E+A  + +E
Sbjct: 113 KTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKE 172

Query: 179 MSEMR----PSPNCATYNAFITGYCRVNELDKALHLFSTMA-NNGIRPNRVTHNILVHAL 233
            +  +      P+  TY + I G C+   + +A  +F   A   G  P+ VT+  ++  L
Sbjct: 173 ANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGL 232

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G + +  +   E+    +     D +T   L+D + K     +A  ++  M Q    
Sbjct: 233 CKLGRVEEGCERFHEM---RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTV 289

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
              V YN++++G C  G ++ A+A F  M +RG +  V+TY+ L++  C +G +  A   
Sbjct: 290 VSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVEL 349

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY-G 412
           +  +   G  P+ +SY  II+GLC  G + KA  +   +L++ + P+ + +N  + G   
Sbjct: 350 FRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQ 409

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           R   +S+   + + M+S G S N+ +++ L+    R G +  A  + +EM+  G+ PDV 
Sbjct: 410 RLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVV 469

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            +N LI   C  G +  AL+++ E+ RR   PD  +Y  L+ G      M+EA  +   +
Sbjct: 470 VFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHM 528

Query: 533 QTLGLAIDH 541
           +  G A  H
Sbjct: 529 KLQGCAPRH 537



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 190/399 (47%), Gaps = 8/399 (2%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD++    ++N LC+   L++A  V+         P+  TYN FI G C+   +D A  L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M      P  VT+  LV  L K G L +A+  L +++   +   +  + T T+++D 
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGN---SPTLKTYTVVIDG 121

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF--- 327
             K G   +A  ++ DM     + D   Y  LI G C +G    A+A + +   R     
Sbjct: 122 LSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHAT 181

Query: 328 -LPDVITYNTLLNCLCKQGKLDEASH-FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
            +PDV+TY +L++ LCK G++ EA   F     + G  PD ++Y +II GLC  G + + 
Sbjct: 182 AVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEG 241

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E    M  +   P+   +  +IDG+ +   +  A  +   ML  G   +  T+N ++  
Sbjct: 242 CERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDG 301

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G + +A++    M   G    V TY+ L+   C+ G++  A++L+  ML RG  P+
Sbjct: 302 LCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN 361

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           +++Y  +I+G C  G + +A   F K+    L  D   F
Sbjct: 362 LVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTF 400



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 180/395 (45%), Gaps = 8/395 (2%)

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
           M  SP+   +   I G CR   LD+A  +       G  P+ VT+N+ +  LCK   + D
Sbjct: 1   MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A + L ++   D+ K     +T T L+D   K G   +A+A+   M +K     +  Y V
Sbjct: 61  AFQLLKKM---DEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTV 117

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK-- 359
           +I+G    G +  A   F  ML  G  PD   Y  L+  LCK GK +EA   Y   +   
Sbjct: 118 VIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARK 177

Query: 360 --TGVAPDQISYKTIIQGLCIHGDIVKARE-FLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
                 PD ++Y ++I GLC  G I++AR+ F    +E+  +P+   +  IIDG  + G 
Sbjct: 178 HHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGR 237

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +         M + G   +  T+ ALI    +   I  A  + ++ML  G      TYN+
Sbjct: 238 VEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNI 297

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           ++   C  G +  A   +  M  RG    ++TY+ L+ G C+ GN+  A E+F ++   G
Sbjct: 298 ILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 357

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
              + + + I+ +   R  +  KA    +K L R 
Sbjct: 358 CEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 392



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 146/307 (47%), Gaps = 10/307 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E  +R   MR+ G      E D   + A+I        I  A  + R+M+Q GTV   
Sbjct: 238 VEEGCERFHEMRNRG-----YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVST 292

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N +++ LCK G + +A      M E        TY+A + G+C    +  A+ LF  
Sbjct: 293 VTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRR 352

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M + G  PN V++NI++  LC+ G L  A  +  ++L     +   DV T    +    +
Sbjct: 353 MLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLL---QRRLCPDVYTFNAFLHGLCQ 409

Query: 274 NGDKFQ-ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
             D     + L+  M  +    ++ +Y++L++G C  G +  A   F +M+ RG  PDV+
Sbjct: 410 RLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVV 469

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            +NTL+  LC  G++DEA   +  L +   APD  SY +++ GL     + +AR     M
Sbjct: 470 VFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHM 528

Query: 393 LEKSVVP 399
             +   P
Sbjct: 529 KLQGCAP 535


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 228/458 (49%), Gaps = 10/458 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D+  + ++I+ LC   ++  AL    KM+ KG  PDV T+  +++ LC    L +A   +
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM+    +PN  TY   I G C+   +D+A+ L S M    + P  VT+N L+  LCK 
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
               +A   L E++         D+ T T L+  + K+     AL ++  +  +  + D+
Sbjct: 129 ERASEAYDLLEEMVYSG---CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRG-FLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           V Y+ LI+G C  G +  A   F +M+K G  +P+ +TYN+L++  C+ GK+DEA +   
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +++TG +PD ++Y T++ G C    +  A + L  M  K + P+   +  ++DG  R  
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTY 474
            LS+A  I   M     S  V+T+N ++    R   + +A   +K ML +    P+V ++
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA---RKFMLEEMDCPPNVVSF 362

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK-IQ 533
           N++I   C +     A++L +E  RR   PD++ YT +I G C    + EA  V+ K ++
Sbjct: 363 NIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE 422

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             G   + I +  L          D+AR   +K  + N
Sbjct: 423 EPGCLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVPN 460



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 214/459 (46%), Gaps = 18/459 (3%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + AVI  LC+  ++  A     +M  +   P+V+T+  L++ LCK G   + D  +
Sbjct: 45  DVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGG---RVDEAV 101

Query: 177 REMSEMRPS--PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
             +S+MR    P   TYN+ I+G C+     +A  L   M  +G  P+  T+  L+   C
Sbjct: 102 ALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFC 161

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQ 293
           K     DA++   +++A        DV+T + L+D   K G   +A+ L+  M +  +  
Sbjct: 162 KSKKSDDALRVFEQLVARG---FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCM 218

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            + V YN LI+GFC  G +  A     +M + G  PDV+TY TL+N  CK  +LD+A   
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +++ G+ PD +++ +++ GLC    +  A   L  M  KS  P  + +N I+DGY R
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 338

Query: 414 CGDLSNAFSIRDLML-SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
              L  A   R  ML       NV +FN +I    +     +A  L +E       PDV 
Sbjct: 339 ANQLEEA---RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVV 395

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRR-GITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            Y  +I   C    +  A ++Y +ML   G  P+ ITY+ L+ G C  G +  A     K
Sbjct: 396 MYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEK 455

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
               G   +   + +L   +R+    + AR++    + R
Sbjct: 456 ----GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 197/387 (50%), Gaps = 7/387 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           S +  TY + I G C+V  L++AL     M + G  P+  T+  ++HALC +  L +A K
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
           FL E+    +   T +V+T T+L+D   K G   +A+AL + M +K + T  V YN LI+
Sbjct: 68  FLEEMA---NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLIS 123

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C     S A+    +M+  G +PD+ TY TL+   CK  K D+A   +  L   G  P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           D ++Y  +I GLC  G + +A +    M++  S +P    +N +I G+ R G +  A ++
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   G S +V T+  L+    +   + DA+ L  +M   G+ PDV T+  L+   C 
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR 303

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              +  A+ +  EM R+  +P + TY  ++ G+C    ++EA +    ++ +    + + 
Sbjct: 304 ENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVS 361

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           F I+ +   ++  S +A ++ ++   R
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRR 388



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 196/415 (47%), Gaps = 41/415 (9%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC GG++  A+ L  KM +K  VP  +T+N L++ LCK     +A  ++ EM 
Sbjct: 84  YTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMV 142

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  TY   ITG+C+  + D AL +F  +   G RP+ VT++ L+  LCK+G L 
Sbjct: 143 YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK 202

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+   G ++    G    + +T   L+  + + G   +A+ L   M +     D+V Y 
Sbjct: 203 EAIDLFGRMIKS--GSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYT 260

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L+NGFC    +  A+    QM ++G  PDV+T+ +L++ LC++ +L +A H  G + + 
Sbjct: 261 TLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRK 320

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE-------------------------- 394
             +P   +Y TI+ G C    + +AR+F+L  ++                          
Sbjct: 321 SCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAME 380

Query: 395 -------KSVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAE 446
                  +   P+  ++  +IDG  R   +  A  + R ++   G   N  T++ L+   
Sbjct: 381 LVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGL 440

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
              G +  A    +  +  G  P++ TYNLLI A         A +L D+M++RG
Sbjct: 441 CNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 37/248 (14%)

Query: 356 VLSKTGVAPDQISYKTIIQGLC-------------------IHGDIV------------- 383
           +++    + D ++Y ++IQGLC                    H D+              
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 384 ---KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
              +AR+FL  M  +++ P    + V+IDG  + G +  A ++   M    V + V T+N
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYN 119

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           +LI    +     +A+ L +EM+  G  PD+FTY  LI   C       AL+++++++ R
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI-DHIPFRILKKRYRRMKESDK 559
           G  PD++TY+ LI G C  G +KEA ++F ++   G  + + + +  L   + RM + D+
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 560 ARDIHQKW 567
           A ++ ++ 
Sbjct: 240 AMNLLERM 247



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 94/214 (43%), Gaps = 8/214 (3%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D     +++  LC   ++  A+ +  +M +K   P V T+N +++  C+   LE+A 
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR 346

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             + E  EM   PN  ++N  I G C+VN   +A+ L          P+ V +  ++  L
Sbjct: 347 KFMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C++  + +A +   ++L  ++     + IT + L+      G     L       +K   
Sbjct: 405 CREKKVDEACRVYRKML--EEPGCLPNSITYSTLVTGLCNAG----MLDRARGYIEKGCV 458

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
            +I  YN+LI+ F        A      M++RGF
Sbjct: 459 PNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 226/459 (49%), Gaps = 16/459 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+      + G A+ + ++M ++G  PD+  +N L+  L K   +++A   + EM 
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TY AFI+GY   +E   A      M   G+ PN+V    L++  CKK  + 
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVI 574

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A      ++   D     D  T T+LM+  FKN     A  ++ +M  K I  D+ +Y 
Sbjct: 575 EACSAYRSMV---DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           VLINGF   G++  A + F +M++ G  P+VI YN LL   C+ G++++A      +S  
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+ ++Y TII G C  GD+ +A      M  K +VP+  ++  ++DG  R  D+  A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML---LDGIF-----PDVF 472
            +I       G +S+   FNALI    +    F    LK E+L   +DG F     P+  
Sbjct: 752 ITIFGTNKK-GCASSTAPFNALINWVFK----FGKTELKTEVLNRLMDGSFDRFGKPNDV 806

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TYN++I   C  G++  A +L+ +M    + P +ITYT L+ G+   G   E   VF + 
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
              G+  DHI + ++   + +   + KA  +  +   +N
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 189/404 (46%), Gaps = 4/404 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           MI  G +P    +  L+   C+  ++ +   ++ EM +     +  TY   + G C   +
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           LD A ++   M  +G RPN V +  L+    +    GDA++ L E+   + G A  D+  
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM--KEQGIA-PDIFC 489

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              L+    K     +A +   +M +  ++ +   Y   I+G+    + +SA  Y  +M 
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           + G LP+ +    L+N  CK+ K+ EA   Y  +   G+  D  +Y  ++ GL  +  + 
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A E    M  K + P+   + V+I+G+ + G++  A SI D M+  G++ NV  +N L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               R G I  A  L  EM + G+ P+  TY  +I   C  G +  A +L+DEM  +G+ 
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           PD   YT L+ G C   +++ A  +F   +  G A    PF  L
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNAL 772



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 199/431 (46%), Gaps = 11/431 (2%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL L+  MI KG VP   T++ L++ LCKI  LE A  ++ EM  +  S +  TY+  I 
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G  +    D A  L   M ++GI      ++  +  + K+G++  A           DG 
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF-------DGM 373

Query: 257 ATSDVITST----ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
             S +I        L++ Y +  +  Q   L  +M ++NI      Y  ++ G C +GD+
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A+    +M+  G  P+V+ Y TL+    +  +  +A      + + G+APD   Y ++
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I GL     + +AR FL+ M+E  + P    +   I GY    + ++A      M   GV
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             N      LI    +   + +A S  + M+  GI  D  TY +L+        +  A +
Sbjct: 554 LPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           ++ EM  +GI PD+ +Y  LI G    GNM++A  +F ++   GL  + I + +L   + 
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673

Query: 553 RMKESDKARDI 563
           R  E +KA+++
Sbjct: 674 RSGEIEKAKEL 684



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 113/476 (23%), Positives = 221/476 (46%), Gaps = 8/476 (1%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLET-----DYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           +L + L ++K + D   +   +++     D   +  +I  L  G     A  L  +M+  
Sbjct: 282 VLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH 341

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G       ++  +  + K G +EKA  +   M      P    Y + I GYCR   + + 
Sbjct: 342 GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M    I  +  T+  +V  +C  G L  A   + E++A        +V+  T L
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG---CRPNVVIYTTL 458

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           + ++ +N     A+ +  +M ++ I  DI  YN LI G      +  A ++  +M++ G 
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+  TY   ++   +  +   A  +   + + GV P+++    +I   C    +++A  
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACS 578

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
              SM+++ ++ +   + V+++G  +   + +A  I   M   G++ +VF++  LI   +
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G++  A S+  EM+ +G+ P+V  YN+L+G  C  G I  A +L DEM  +G+ P+ +
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           TY  +I G+C  G++ EA  +F +++  GL  D   +  L     R+ + ++A  I
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 199/443 (44%), Gaps = 29/443 (6%)

Query: 101 LKTMRDTG----PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           +K MR+ G     V CT          +I + C   K+  A    R M+ +G + D  T+
Sbjct: 545 VKEMRECGVLPNKVLCT---------GLINEYCKKEKVIEACSAYRSMVDQGILGDAKTY 595

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
             L+N L K   ++ A+ + REM     +P+  +Y   I G+ ++  + KA  +F  M  
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G+ PN + +N+L+   C+ G +  A + L E+          + +T   ++D Y K+GD
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG---LHPNAVTYCTIIDGYCKSGD 712

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A  L+++M  K +  D   Y  L++G C   D+  A   F    K+G       +N 
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNA 771

Query: 337 LLNCLCKQGKLDEASHFY-----GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           L+N + K GK +  +        G   + G  P+ ++Y  +I  LC  G++  A+E    
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M   +++P    +  +++GY + G  +  F + D  ++ G+  +   ++ +I A  + G 
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890

Query: 452 IFDAFSLKKEMLL-----DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              A  L  +M       DG    + T   L+     +G + +A ++ + M+R    PD 
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950

Query: 507 ITYTELIKGHCARGNMK-EAEEV 528
            T  ELI   C   N + EA+ V
Sbjct: 951 ATVIELINESCISSNQRVEADAV 973



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/426 (23%), Positives = 186/426 (43%), Gaps = 19/426 (4%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI-REMSEMRPSPNCATYNAFITGYCR 200
           + M+++  V DV T++ L+   C+ G+++    V+ +   E R     AT N        
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRT----ATLN-------- 257

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
              +D AL L  +M   G+ P + T+++L+  LCK   L DA   L E+   D    + D
Sbjct: 258 ---VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM---DSLGVSLD 311

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
             T ++L+D   K  +   A  L ++M    I      Y+  I      G +  A A F 
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            M+  G +P    Y +L+   C++  + +       + K  +     +Y T+++G+C  G
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
           D+  A   +  M+     P   I+  +I  + +     +A  +   M   G++ ++F +N
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           +LI+  ++   + +A S   EM+ +G+ P+ FTY   I           A +   EM   
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G+ P+ +  T LI  +C +  + EA   +  +   G+  D   + +L     +  + D A
Sbjct: 552 GVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 561 RDIHQK 566
            +I ++
Sbjct: 612 EEIFRE 617



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 108/475 (22%), Positives = 190/475 (40%), Gaps = 78/475 (16%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT--------- 196
           QK T   + + ++L  +LC  G  EKA  V+  M E R  P    +++ +          
Sbjct: 90  QKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIE-RNWPVAEVWSSIVRCSQEFVGKS 148

Query: 197 -----------GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG---LLGDA 242
                      GY     +++A+ +FS+     + P      +L+ AL +     L  D 
Sbjct: 149 DDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDV 208

Query: 243 VKFLGEVLADDDGKATSDVITS-------TILMDSYFKNGDKFQ--------ALALWNDM 287
            K + E     D K    +I +        +  D  FK   +F+        AL L   M
Sbjct: 209 YKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESM 268

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN-------- 339
             K +      Y+VLI+G C    +  A +   +M   G   D  TY+ L++        
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328

Query: 340 ------------------------CLC---KQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
                                   C+C   K+G +++A   +  +  +G+ P   +Y ++
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I+G C   ++ +  E L+ M ++++V  P+ +  ++ G    GDL  A++I   M++ G 
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             NV  +  LI    +     DA  + KEM   GI PD+F YN LI        +  A  
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
              EM+  G+ P+  TY   I G+        A++   +++  G+    +P ++L
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV----LPNKVL 559



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 120/309 (38%), Gaps = 49/309 (15%)

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D V + +L +G+   G I  A   F   +    +P +     LL+ L +  +LD     Y
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + +  V  D  +Y  +I   C  G++   ++ L    EK    E     + +DG    
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKT-EK----EFRTATLNVDG---- 260

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
                A  +++ M+  G+    +T++ LI    +   + DA SL  EM   G+  D  TY
Sbjct: 261 -----ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY 315

Query: 475 NLLI-------GASCNLGHIH----------------------------LALQLYDEMLR 499
           +LLI        A    G +H                             A  L+D M+ 
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIA 375

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G+ P    Y  LI+G+C   N+++  E+  +++   + I    +  + K      + D 
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG 435

Query: 560 ARDIHQKWL 568
           A +I ++ +
Sbjct: 436 AYNIVKEMI 444


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 208/418 (49%), Gaps = 3/418 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G VP+  T+ YL+  LC+    E+A  V R M+    SPN  +Y+  I G CR  +
Sbjct: 43  MLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK 102

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D+A  L + M + G +PN VT+  L+  LCK G L +AV     ++         D + 
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRG---CPPDGVV 159

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             +L+D + K GD  +A  L+ +M +K     +  YN L++GF   G+     + F  ML
Sbjct: 160 YNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDML 219

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           ++G +P++ T+N LL+  CK G + EA   +  +   G  PD +SY T+I+G+C  G   
Sbjct: 220 RQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPH 279

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A+  L  M+   V P+   +N++IDGY + G L +A  +   +   G+  + F+++ +I
Sbjct: 280 EAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTII 339

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               R G +  AF + K+M+ +G  PD      L+   C    +  + +L+  M++    
Sbjct: 340 DCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECV 399

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
           P I  Y  L+   C      +  E+F ++   G + D    +++ +  RR  + D A 
Sbjct: 400 PLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAAE 457



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 204/404 (50%), Gaps = 4/404 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC   +   A  + R M  +G  P+V +++ L+  LC+   +++A  ++ EM +  
Sbjct: 58  LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY + ++G C++ +L +A+ LFS M   G  P+ V +N+L+    KKG +G+A 
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+L   +      V T   L+  + + G+  +  +L+ DM ++    +I  +N L+
Sbjct: 178 RLFEEML---EKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GFC  GD+  A   F +M   G  PDV++YNTL+  +C +GK  EA      + ++GV 
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVG 294

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +SY  +I G    G +  A +    + +  + P+   ++ IID   R G +  AF +
Sbjct: 295 PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVV 354

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M++ G + +      L++   RG  + ++  L + M+     P +  YNLL+   C 
Sbjct: 355 FKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCK 414

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
                   +++ E+  RG +PD +  +++I     R + K+A E
Sbjct: 415 AKRSDDVCEIFHELTERGFSPD-VEISKVILETLRRSDDKDAAE 457



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 156/324 (48%), Gaps = 3/324 (0%)

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           +++N L+  L K G          ++LA        +  T   L+ S  +     +A ++
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLA---AGCVPNTYTYGYLLRSLCQAQRFEEARSV 74

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           +  M  +    ++ +Y++LI G C    +  A     +M+  G  P+V+TY +LL+ LCK
Sbjct: 75  FRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCK 134

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            GKL EA   +  +   G  PD + Y  +I G    GD+ +A      MLEK  +P    
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N ++ G+ R G+     S+   ML  G   N+FTFN L+    + G + +A  L  EM 
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR 254

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             G  PDV +YN LI   C+ G  H A +L  EM+R G+ PDI++Y  LI G+   G + 
Sbjct: 255 SLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALD 314

Query: 524 EAEEVFAKIQTLGLAIDHIPFRIL 547
            A ++F +I   GL  D   +  +
Sbjct: 315 HAIKLFYEIPKSGLEPDAFSYSTI 338



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 152/299 (50%)

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           ++   L++   K+G        +NDM       +   Y  L+   C       A + F  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M  +G  P+V +Y+ L+  LC+  K+DEA+     +   G  P+ ++Y +++ GLC  G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + +A +    M+ +   P+  ++NV+IDG+ + GD+  A+ + + ML  G    VFT+N+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           L+   +R G      SL K+ML  G  P++FT+N L+   C +G +  A +L+ EM   G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
             PD+++Y  LI+G C++G   EA+ +  ++   G+  D + + IL   Y +    D A
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 171/371 (46%), Gaps = 6/371 (1%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           +YN  +    +    D     ++ M   G  PN  T+  L+ +LC+     +A      +
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
            A      + +V + +IL+    +     +A  L N+M     Q ++V Y  L++G C  
Sbjct: 79  AAQG---CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G +  A   F +M+ RG  PD + YN L++   K+G + EA   +  + + G  P   +Y
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            +++ G    G+  + +     ML +  VP    +N ++DG+ + GD+  A  +   M S
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G   +V ++N LI      G   +A  L +EM+  G+ PD+ +YN+LI      G +  
Sbjct: 256 LGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH---IPFRI 546
           A++L+ E+ + G+ PD  +Y+ +I   C  G +  A  VF  +   G A D    IP  I
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVI 375

Query: 547 LKKRYRRMKES 557
              R  R+ ES
Sbjct: 376 GLCRGERLTES 386



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 144/286 (50%), Gaps = 3/286 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  LC  GK+  A+ L  +M+ +G  PD + +N L++   K GD+ +A  +  EM E 
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P   TYN+ ++G+ R  E  +   LF  M   G  PN  T N L+   CK G + +A
Sbjct: 187 GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEA 246

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +   E+ +        DV++   L+      G   +A  L  +M +  +  DIV+YN+L
Sbjct: 247 HRLFLEMRSLG---CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G+  +G +  A   F ++ K G  PD  +Y+T+++CLC+ GK+  A   +  +   G 
Sbjct: 304 IDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGS 363

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           APD      ++ GLC    + ++ E   +M++   VP    +N+++
Sbjct: 364 APDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 99/237 (41%), Gaps = 35/237 (14%)

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           ++YN LL  L K G+ D     Y  +   G  P+  +Y  +++ LC      +A+ F   
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLC------QAQRF--- 68

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
                                       A S+   M + G S NVF+++ LI    RG  
Sbjct: 69  --------------------------EEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK 102

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + +A  L  EM+  G  P+V TY  L+   C +G +  A+ L+  M+ RG  PD + Y  
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           LI G   +G+M EA  +F ++   G       +  L   + R  E  + + + +  L
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDML 219



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 50/120 (41%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE D   +  +I  LC  GK+G A  + + MI  G+ PD      LV  LC+   L ++ 
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + + M +    P    YN  +   C+    D    +F  +   G  P+     +++  L
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/137 (21%), Positives = 60/137 (43%)

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
              ++N L+    + G     +    +ML  G  P+ +TY  L+ + C       A  ++
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
             M  +G +P++ +Y+ LI G C    + EA E+  ++   G   + + +  L     +M
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 555 KESDKARDIHQKWLLRN 571
            +  +A D+  + + R 
Sbjct: 136 GKLKEAVDLFSRMVYRG 152


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 210/418 (50%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  LCL GK+  A+ L  +M++ G  P+ +T+  ++  +CK G    A  ++R+M E 
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +   +   Y+  I G C+   LD A +LF+ M   G + + + +  L+   C  G   D 
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K L +++     K T DV+  + L+D + K G   +A  L  +M Q+ I  D V Y  L
Sbjct: 302 AKLLRDMIKR---KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC    +  A      M+ +G  P++ T+N L+N  CK   +D+    +  +S  GV
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D ++Y T+IQG C  G +  A+E    M+ + V P+   + +++DG    G+   A  
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I + +    +  ++  +N +I        + DA+ L   + L G+ PDV TYN++IG  C
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             G +  A  L+ +M   G +P+  TY  LI+ H   G+  ++ ++  +I+  G ++D
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 207/404 (51%), Gaps = 3/404 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            L L ++M  KG   ++ T + ++N  C+   L  A   + ++ ++   P+  T++  I 
Sbjct: 91  VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C    + +AL L   M   G +P  +T N LV+ LC  G + DAV  +  ++  + G 
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV--ETGF 208

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
             ++V    +L     K+G    A+ L   M ++ I+ D V Y+++I+G C +G + +AF
Sbjct: 209 QPNEVTYGPVL-KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F +M  +GF  D+I Y TL+   C  G+ D+ +     + K  + PD +++  +I   
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
              G + +A E    M+++ + P+   +  +IDG+ +   L  A  + DLM+S G   N+
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            TFN LI    +   I D   L ++M L G+  D  TYN LI   C LG + +A +L+ E
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           M+ R + PDI++Y  L+ G C  G  ++A E+F KI+   + +D
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 217/454 (47%), Gaps = 38/454 (8%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C   K+  A     K+I+ G  PD +T + L+N LC  G + +A  ++  M EM   P  
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            T NA + G C   ++  A+ L   M   G +PN VT+  ++  +CK G    A++ L +
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +   ++ K   D +  +I++D   K+G    A  L+N+M  K  + DI+ Y  LI GFC 
Sbjct: 238 M---EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G           M+KR   PDV+ ++ L++C  K+GKL EA   +  + + G++PD ++
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y ++I G C    + KA   L  M+ K   P    +N++I+GY +   + +   +   M 
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             GV ++  T+N LI      G +  A  L +EM+   + PD+ +Y +L+   C+ G   
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474

Query: 489 LALQLYDEMLR-----------------------------------RGITPDIITYTELI 513
            AL++++++ +                                   +G+ PD+ TY  +I
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G C +G++ EA+ +F K++  G + +   + IL
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 184/407 (45%), Gaps = 40/407 (9%)

Query: 166 IGDLEKADHV--IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           I D+++ D V   +EM+  RP P    ++   +   R  + D  L L   M   GI  N 
Sbjct: 48  IVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNL 107

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
            T +I+++  C+   L  A   +G+++                                 
Sbjct: 108 YTLSIMINCCCRCRKLSLAFSAMGKII--------------------------------- 134

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
                +   + D V ++ LING CL G +S A     +M++ G  P +IT N L+N LC 
Sbjct: 135 -----KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            GK+ +A      + +TG  P++++Y  +++ +C  G    A E L  M E+ +  +   
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +++IIDG  + G L NAF++ + M   G  +++  +  LI      G   D   L ++M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
              I PDV  ++ LI      G +  A +L+ EM++RGI+PD +TYT LI G C    + 
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +A  +   + + G   +   F IL   Y +    D   ++ +K  LR
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 160/323 (49%), Gaps = 3/323 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +IR  C  G+      L R MI++   PDV+  + L++   K G L +A+ + +EM 
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   SP+  TY + I G+C+ N+LDKA H+   M + G  PN  T NIL++  CK  L+ 
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           D ++   ++         +D +T   L+  + + G    A  L+ +M  + ++ DIV+Y 
Sbjct: 405 DGLELFRKMSLRG---VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +L++G C NG+   A   F ++ K     D+  YN +++ +C   K+D+A   +  L   
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GV PD  +Y  +I GLC  G + +A      M E    P    +N++I  +   GD + +
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581

Query: 421 FSIRDLMLSFGVSSNVFTFNALI 443
             + + +   G S +  T   ++
Sbjct: 582 AKLIEEIKRCGFSVDASTVKMVV 604



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 57/123 (46%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           +  +E D   +  +I  +C   K+  A  L   +  KG  PDV T+N ++  LCK G L 
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +AD + R+M E   SPN  TYN  I  +    +  K+  L   +   G   +  T  ++V
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604

Query: 231 HAL 233
             L
Sbjct: 605 DML 607


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/402 (33%), Positives = 205/402 (50%), Gaps = 6/402 (1%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  PDV   N ++  L      +    V  EM ++R  P   TYN  +  + +    D+A
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 208 LHLFSTMANNG--IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
             L   M   G     N VT N+++  L ++G L +AVK +  +      KA+S   T  
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK--KASS--FTYN 312

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            L+ +  + G   +A AL  +M  + I   +V YN +I+G        +A   F +M   
Sbjct: 313 PLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAM 372

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G LPDVITYN+LLN  CK G L EA    G L + G+AP  ++Y T+I G C  GD+ +A
Sbjct: 373 GLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEA 432

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           R     M+E+   P+   + ++++G  +  +L+ A    D MLS G+  + F +N  I A
Sbjct: 433 RRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICA 492

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
           E    S   AF L++ M+L GI+PD  TYN++I   C  G++  A +L  +M+  G+ PD
Sbjct: 493 ELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPD 552

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            ITYT LI  HC RG ++EA ++   + + GL    + + IL
Sbjct: 553 CITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTIL 594



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 194/401 (48%), Gaps = 4/401 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A  L+ +M  +G +P V+T+N +++ L K    E A     EM  M   P+  TY
Sbjct: 322 GFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITY 381

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N+ +  YC+   L +AL L   +   G+ P  +T+N L+   C+ G L +A +   E++ 
Sbjct: 382 NSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMV- 440

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     DV T TILM+   K  +   A   +++M  K +Q D  AYN  I        
Sbjct: 441 --EQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSS 498

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              AF     M+ +G  PD +TYN +++ LCK G L +A      +   G+ PD I+Y  
Sbjct: 499 TPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTC 558

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I   C  G + +AR+ L  M+   + P    + +++    R G+L +A+     ML  G
Sbjct: 559 LIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVG 618

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N  T+N LI A    G    AF    EML  G+ P+ +TY LLI  +C  G+   A+
Sbjct: 619 IEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAI 678

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           +LY EM + GI PD  T+  L KG    G+M  A E    I
Sbjct: 679 RLYFEMHQNGIPPDYCTHNALFKGF-DEGHMYHAIEYMENI 718



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 197/398 (49%), Gaps = 3/398 (0%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+N L+  L + G + KA+ +  EM      P   TYNA I G  +  + + A   F+ 
Sbjct: 309 FTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAE 368

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G+ P+ +T+N L++  CK G L +A+  LG++           V+T   L+D Y +
Sbjct: 369 MRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDL---RRAGLAPTVLTYNTLIDGYCR 425

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            GD  +A  L  +M ++    D+  Y +L+NG     +++ A  +F +ML +G  PD   
Sbjct: 426 LGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFA 485

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YNT +           A     V+   G+ PD ++Y  II GLC  G++  A+     M+
Sbjct: 486 YNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMV 545

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
              + P+   +  +I  +   G L  A  + + M+S G+  +V T+  L+    R G+++
Sbjct: 546 SDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLY 605

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A+   ++ML  GI P+  TYN+LI A C  G   LA + + EML RG+ P+  TYT LI
Sbjct: 606 SAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLI 665

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            G+C  GN  +A  ++ ++   G+  D+     L K +
Sbjct: 666 DGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 703



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 202/407 (49%), Gaps = 6/407 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP--SPNCATYNAFITGYCR 200
           +M+Q    P ++T+N L++   K G  ++A  +++EM       S N  T+N  I+   R
Sbjct: 227 EMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAR 286

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
              L+ A+ L  +M  +  + +  T+N L+ AL ++G +  A     E+  +++G   + 
Sbjct: 287 EGHLENAVKLVDSMRLSK-KASSFTYNPLITALLERGFVRKAEALQMEM--ENEGIMPT- 342

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           V+T   ++    K      A   + +M    +  D++ YN L+N +C  G++  A     
Sbjct: 343 VVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLG 402

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            + + G  P V+TYNTL++  C+ G L EA      + + G  PD  +Y  ++ G     
Sbjct: 403 DLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVR 462

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
           ++  AREF   ML K + P+   +N  I           AF +R++M+  G+  +  T+N
Sbjct: 463 NLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYN 522

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            +I    + G++ DA  LK +M+ DG+ PD  TY  LI A C  G +  A +L + M+  
Sbjct: 523 VIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSD 582

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           G+ P ++TYT L+   C RGN+  A   F K+  +G+  + I + +L
Sbjct: 583 GLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVL 629



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 156/321 (48%), Gaps = 14/321 (4%)

Query: 94  LKENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           LKE L  L  +R  G  P   T  T       +I   C  G +  A  L+ +M+++G  P
Sbjct: 394 LKEALWLLGDLRRAGLAPTVLTYNT-------LIDGYCRLGDLAEARRLKEEMVEQGCFP 446

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           DV T+  L+N   K+ +L  A     EM      P+C  YN  I     ++    A  L 
Sbjct: 447 DVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLR 506

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M   GI P+ VT+N+++  LCK G L DA +   ++++D       D IT T L+ ++
Sbjct: 507 EVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDG---LQPDCITYTCLIHAH 563

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            + G   +A  L N M    +Q  +V Y +L++  C  G++ SA+ +F +ML  G  P+ 
Sbjct: 564 CERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNE 623

Query: 332 ITYNTLLNCLCKQGKLDEA-SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           ITYN L++ LC  G+   A  HF+ +L + G+AP++ +Y  +I G C  G+   A     
Sbjct: 624 ITYNVLIHALCMTGRTPLAFRHFHEMLER-GLAPNKYTYTLLIDGNCREGNWADAIRLYF 682

Query: 391 SMLEKSVVPEPHIWNVIIDGY 411
            M +  + P+    N +  G+
Sbjct: 683 EMHQNGIPPDYCTHNALFKGF 703



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 3/254 (1%)

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG--VAPDQISYKTIIQ 374
           A + +ML+    P ++TYNTLL+   K+G+ DEAS     +   G   + + +++  +I 
Sbjct: 223 AVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVIS 282

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
            L   G +  A + + SM   S       +N +I      G +  A +++  M + G+  
Sbjct: 283 FLAREGHLENAVKLVDSM-RLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMP 341

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
            V T+NA+I    +      A     EM   G+ PDV TYN L+   C  G++  AL L 
Sbjct: 342 TVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLL 401

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
            ++ R G+ P ++TY  LI G+C  G++ EA  +  ++   G   D   + IL    R++
Sbjct: 402 GDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKV 461

Query: 555 KESDKARDIHQKWL 568
           +    AR+   + L
Sbjct: 462 RNLAMAREFFDEML 475



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 5/244 (2%)

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  PDV   N +L  L    + D+    YG + +  V P  ++Y T++      G   +A
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 386 REFLLSMLEKS--VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM-LSFGVSSNVFTFNAL 442
              L  M  +          +NV+I    R G L NA  + D M LS   SS  FT+N L
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASS--FTYNPL 314

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I A    G +  A +L+ EM  +GI P V TYN +I           A   + EM   G+
Sbjct: 315 ITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGL 374

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            PD+ITY  L+  +C  GN+KEA  +   ++  GLA   + +  L   Y R+ +  +AR 
Sbjct: 375 LPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARR 434

Query: 563 IHQK 566
           + ++
Sbjct: 435 LKEE 438


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 224/451 (49%), Gaps = 7/451 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +RC    D   + +++   C    +  A  +   M ++  V    ++  L++ LC+ G L
Sbjct: 216 LRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAV----SYTNLIHGLCEAGKL 271

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A      M E    P   TY   +   C      +AL LF  M   G  PN  T+ +L
Sbjct: 272 HEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVL 331

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LCK+G + +A+K L E++  + G A S V+    L+ SY K G    A+ +   M  
Sbjct: 332 IDYLCKEGRMDEALKMLNEMV--EKGVAPS-VVPFNALIGSYCKRGMMEDAVGVLGLMES 388

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K +  ++  YN LI GFC    +  A A   +M++    PDV+TYNTL++ LC+ G +D 
Sbjct: 389 KKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDS 448

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           AS  + ++ + G +PDQ ++   +  LC  G + +A + L S+ EK V    H +  +ID
Sbjct: 449 ASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALID 508

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           GY + G + +A S+   ML+     N  TFN +I    + G + DA  L ++M    + P
Sbjct: 509 GYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKP 568

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            + TYN+L+           A ++ + ++  G  P+++TYT  IK +C++G ++EAEE+ 
Sbjct: 569 TLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMV 628

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            KI+  G+ +D   + +L   Y  M   D A
Sbjct: 629 IKIKNEGVLLDSFIYNLLINAYGCMGLLDSA 659



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 198/440 (45%), Gaps = 38/440 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  GK+  AL    +M + G  P V T+  LV  LC+ G   +A  +  EM 
Sbjct: 258 YTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMR 317

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TY   I   C+   +D+AL + + M   G+ P+ V  N L+ + CK+G++ 
Sbjct: 318 ERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMME 377

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DAV  LG +   +  K   +V T   L+  + +     +A+AL N M +  +  D+V YN
Sbjct: 378 DAVGVLGLM---ESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYN 434

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G C  G + SA   F  M++ GF PD  T+N  + CLC+ G++ EA      L + 
Sbjct: 435 TLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEK 494

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG----- 415
            V  ++ +Y  +I G C  G I  A      ML +  +P    +NV+IDG  + G     
Sbjct: 495 HVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDA 554

Query: 416 ------------------------------DLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
                                         D   A  I + ++S G   NV T+ A I A
Sbjct: 555 MLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKA 614

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
               G + +A  +  ++  +G+  D F YNLLI A   +G +  A  +   M   G  P 
Sbjct: 615 YCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPS 674

Query: 506 IITYTELIKGHCARGNMKEA 525
            +TY+ L+K      + KE 
Sbjct: 675 YLTYSILMKHLVIEKHKKEG 694



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 188/383 (49%), Gaps = 10/383 (2%)

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMAN---NGIRPNRVTHNILVHALCKKGLLGDAVKF 245
            +YN  +    R + +D+ + L+  M     N + PN +T N ++++ CK G +  A  F
Sbjct: 152 TSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLF 211

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
              +L  + G    D+ T T L+  Y +N D  +A  ++  M ++N     V+Y  LI+G
Sbjct: 212 FVRILRCEPG---PDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNA----VSYTNLIHG 264

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C  G +  A  ++ +M + G  P V TY  L+  LC+ G+  EA   +G + + G  P+
Sbjct: 265 LCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPN 324

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
             +Y  +I  LC  G + +A + L  M+EK V P    +N +I  Y + G + +A  +  
Sbjct: 325 VYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLG 384

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
           LM S  V  NV T+N LI    RG S+  A +L  +M+   + PDV TYN LI   C +G
Sbjct: 385 LMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVG 444

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  A +L+  M+R G +PD  T+   +   C  G + EA ++   ++   +  +   + 
Sbjct: 445 VVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYT 504

Query: 546 ILKKRYRRMKESDKARDIHQKWL 568
            L   Y +  + + A  + ++ L
Sbjct: 505 ALIDGYCKAGKIEHAASLFKRML 527



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 194/443 (43%), Gaps = 19/443 (4%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   L  D   +  +I  LC  G + +A  L R MI+ G  PD  T N  +  LC++G +
Sbjct: 422 VESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRV 481

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A  ++  + E     N   Y A I GYC+  +++ A  LF  M      PN +T N++
Sbjct: 482 GEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVM 541

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  L K+G + DA+  L E +A  D K T  + T  IL++   K  D  +A  + N +  
Sbjct: 542 IDGLRKEGKVQDAM-LLVEDMAKFDVKPT--LHTYNILVEEVLKEYDFDRANEILNRLIS 598

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
              Q ++V Y   I  +C  G +  A     ++   G L D   YN L+N     G LD 
Sbjct: 599 SGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDS 658

Query: 350 ASHFYGVLSK---TGVAPDQISYKTIIQGLCI--HGDIVKAREFLLSMLEKSVVPEPHIW 404
           A   +GVL +   TG  P  ++Y  +++ L I  H         L   L    V    IW
Sbjct: 659 A---FGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIW 715

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           + I        D      + + M   G   N+ T++ LI    + G +  AFSL   M  
Sbjct: 716 SKI--------DFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMRE 767

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            GI P    +N L+ + C LG    A+ L D M+       + +Y  LI G   + N ++
Sbjct: 768 GGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEK 827

Query: 525 AEEVFAKIQTLGLAIDHIPFRIL 547
           AE VF  +   G   D + +++L
Sbjct: 828 AEAVFCSLLRCGYNYDEVAWKVL 850



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/412 (22%), Positives = 179/412 (43%), Gaps = 40/412 (9%)

Query: 104 MRDTGPVRCTLETDYRRHV--------AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           M   G     LE+   +HV        A+I   C  GKI  A  L ++M+ +  +P+ +T
Sbjct: 478 MGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSIT 537

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
            N +++ L K G ++ A  ++ +M++    P   TYN  +    +  + D+A  + + + 
Sbjct: 538 FNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLI 597

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           ++G +PN VT+   + A C +G L +A +    V+   +     D     +L+++Y   G
Sbjct: 598 SSGYQPNVVTYTAFIKAYCSQGRLEEAEEM---VIKIKNEGVLLDSFIYNLLINAYGCMG 654

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCL-----------------------NGDI 312
               A  +   MF    +   + Y++L+    +                       N DI
Sbjct: 655 LLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDI 714

Query: 313 SSAFAY------FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
            S   +      F +M + G +P++ TY+ L+N LCK G+L+ A   Y  + + G++P +
Sbjct: 715 WSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSE 774

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           I + +++   C  G   +A   L SM+E S +     + ++I G     +   A ++   
Sbjct: 775 IIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCS 834

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           +L  G + +   +  LI    + G +     L   M  +G      TY++L+
Sbjct: 835 LLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLM 886


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 228/458 (49%), Gaps = 10/458 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D+  + ++I+ LC   ++  AL    KM+ KG  PDV T+  +++ LC    L +A   +
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM+    +PN  TY   I G C+   +D+A+ L S M    + P  VT+N L+  LCK 
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
               +A   L E++         D+ T T L+  + K+     AL ++  +  +  + D+
Sbjct: 129 ERASEAYDLLEEMVYSG---CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRG-FLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           V Y+ LI+G C  G +  A   F +M+K G  +P+ +TYN+L++  C+ GK+DEA +   
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +++TG +PD ++Y T++ G C    +  A + L  M  K + P+   +  ++DG  R  
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTY 474
            LS+A  I   M     S  V+T+N ++    R   + +A   +K ML +    P+V ++
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA---RKFMLEEMDCPPNVVSF 362

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK-IQ 533
           N++I   C +     A++L +E  RR   PD++ YT +I G C    + EA  V+ K ++
Sbjct: 363 NIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE 422

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             G   + I +  L          D+AR   +K  + N
Sbjct: 423 EPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPN 460



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 214/459 (46%), Gaps = 18/459 (3%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + AVI  LC+  ++  A     +M  +   P+V+T+  L++ LCK G   + D  +
Sbjct: 45  DVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGG---RVDEAV 101

Query: 177 REMSEMRPS--PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
             +S+MR    P   TYN+ I+G C+     +A  L   M  +G  P+  T+  L+   C
Sbjct: 102 ALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFC 161

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQ 293
           K     DA++   +++A        DV+T + L+D   K G   +A+ L+  M +  +  
Sbjct: 162 KSKKSDDALRVFEQLVARG---FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCM 218

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            + V YN LI+GFC  G +  A     +M + G  PDV+TY TL+N  CK  +LD+A   
Sbjct: 219 PNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +++ G+ PD +++ +++ GLC    +  A   L  M  KS  P  + +N I+DGY R
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 338

Query: 414 CGDLSNAFSIRDLML-SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
              L  A   R  ML       NV +FN +I    +     +A  L +E       PDV 
Sbjct: 339 ANQLEEA---RKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVV 395

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRR-GITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            Y  +I   C    +  A ++Y +ML   G  P+ ITY+ LI G C  G +  A     K
Sbjct: 396 MYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEK 455

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
               G   +   + +L   +R+    + AR++    + R
Sbjct: 456 ----GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 197/387 (50%), Gaps = 7/387 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           S +  TY + I G C+V  L++AL     M + G  P+  T+  ++HALC +  L +A K
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
           FL E+    +   T +V+T T+L+D   K G   +A+AL + M +K + T  V YN LI+
Sbjct: 68  FLEEMA---NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLIS 123

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C     S A+    +M+  G +PD+ TY TL+   CK  K D+A   +  L   G  P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           D ++Y  +I GLC  G + +A +    M++  S +P    +N +I G+ R G +  A ++
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   G S +V T+  L+    +   + DA+ L  +M   G+ PDV T+  L+   C 
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR 303

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              +  A+ +  EM R+  +P + TY  ++ G+C    ++EA +    ++ +    + + 
Sbjct: 304 ENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVS 361

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           F I+ +   ++  S +A ++ ++   R
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRR 388



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 196/415 (47%), Gaps = 41/415 (9%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC GG++  A+ L  KM +K  VP  +T+N L++ LCK     +A  ++ EM 
Sbjct: 84  YTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMV 142

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  TY   ITG+C+  + D AL +F  +   G RP+ VT++ L+  LCK+G L 
Sbjct: 143 YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK 202

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+   G ++    G    + +T   L+  + + G   +A+ L   M +     D+V Y 
Sbjct: 203 EAIDLFGRMIKS--GSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYT 260

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L+NGFC    +  A+    QM ++G  PDV+T+ +L++ LC++ +L +A H  G + + 
Sbjct: 261 TLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRK 320

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE-------------------------- 394
             +P   +Y TI+ G C    + +AR+F+L  ++                          
Sbjct: 321 SCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAME 380

Query: 395 -------KSVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAE 446
                  +   P+  ++  +IDG  R   +  A  + R ++   G   N  T++ LI   
Sbjct: 381 LVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGL 440

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
              G +  A    +  +  G  P++ TYNLLI A         A +L D+M++RG
Sbjct: 441 CNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 37/248 (14%)

Query: 356 VLSKTGVAPDQISYKTIIQGLC-------------------IHGDIV------------- 383
           +++    + D ++Y ++IQGLC                    H D+              
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 384 ---KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
              +AR+FL  M  +++ P    + V+IDG  + G +  A ++   M    V + V T+N
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYN 119

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           +LI    +     +A+ L +EM+  G  PD+FTY  LI   C       AL+++++++ R
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI-DHIPFRILKKRYRRMKESDK 559
           G  PD++TY+ LI G C  G +KEA ++F ++   G  + + + +  L   + RM + D+
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 560 ARDIHQKW 567
           A ++ ++ 
Sbjct: 240 AMNLLERM 247



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/248 (20%), Positives = 101/248 (40%), Gaps = 43/248 (17%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D     +++  LC   ++  A+ +  +M +K   P V T+N +++  C+   LE+A 
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR 346

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             + E  EM   PN  ++N  I G C+VN   +A+ L          P+ V +  ++  L
Sbjct: 347 KFMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C++  + +A +   ++L +      S                                  
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNS---------------------------------- 430

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
              + Y+ LI G C  G +  A  Y    +++G +P++ TYN L++   K  + ++A   
Sbjct: 431 ---ITYSTLITGLCNAGMLDRARGY----IEKGCVPNIGTYNLLIDAFRKANRDEDAREL 483

Query: 354 YGVLSKTG 361
              + + G
Sbjct: 484 LDDMVQRG 491


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 204/396 (51%), Gaps = 7/396 (1%)

Query: 114 LETDYR----RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +E  YR        +I  L L  K   A+ L  +M+Q+G  P+++T+  +VN LCK GD+
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           + A +++ +M   +   N   Y+  I   C+    D AL+LF+ M N G+RPN +T++ L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LC      DA + L +++   + K   +V+T   L+D++ K G   +A  L+++M +
Sbjct: 302 ISCLCNYERWSDASRLLSDMI---ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           ++I  DI  Y+ LINGFC++  +  A   F  M+ +   P+V+TYNTL+N  CK  ++DE
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
               +  +S+ G+  + ++Y T+I G     D   A+     M+   V P    +N ++D
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  + G L  A  + + +    +   ++T+N +I    + G + D + L   + L G+ P
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
           DV  YN +I   C  G    A  L+ +M   G  PD
Sbjct: 539 DVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 220/443 (49%), Gaps = 3/443 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C   +I  AL L  KM++ G  P ++T + L+N  C    +  A  ++ +M EM 
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T+   I G    N+  +A+ L   M   G +PN VT+ ++V+ LCK+G +  A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++ A    K  ++V+  + ++DS  K   +  AL L+ +M  K ++ +++ Y+ LI
Sbjct: 246 NLLNKMEA---AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C     S A      M++R   P+V+T+N L++   K+GKL EA   Y  + K  + 
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID 362

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y ++I G C+H  + +A+     M+ K   P    +N +I+G+ +   +     +
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+  N  T+  LI    +     +A  + K+M+ DG+ P++ TYN L+   C 
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A+ +++ + R  + P I TY  +I+G C  G +++  ++F  +   G+  D I 
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII 542

Query: 544 FRILKKRYRRMKESDKARDIHQK 566
           +  +   + R    ++A  + +K
Sbjct: 543 YNTMISGFCRKGLKEEADALFRK 565



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 226/466 (48%), Gaps = 15/466 (3%)

Query: 72  FSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLG 131
           F +++   +GNP+   +++DL           M   G    +   DYR    ++R+    
Sbjct: 16  FVHRNLQGKGNPRIAPSSIDLC---------GMCYWGRAFSSGSGDYRE---ILRNGLHS 63

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
            K+  A+ L   M++   +P +   N L++ + K+   +    +  +M  +  S N  TY
Sbjct: 64  MKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTY 123

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I  +CR +++  AL L   M   G  P+ VT + L++  C    + DAV  + +++ 
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV- 182

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     D IT T L+   F +    +A+AL + M Q+  Q ++V Y V++NG C  GD
Sbjct: 183 --EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I  AF    +M       +V+ Y+T+++ LCK    D+A + +  +   GV P+ I+Y +
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I  LC +     A   L  M+E+ + P    +N +ID + + G L  A  + D M+   
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  ++FT+++LI        + +A  + + M+    FP+V TYN LI   C    I   +
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           +L+ EM +RG+  + +TYT LI G     +   A+ VF ++ + G+
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 181/407 (44%), Gaps = 42/407 (10%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           L+ A  +   M + RP P+   +N  ++   ++ + D  + L   M   GI  N  T+NI
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L++  C++  +                                        ALAL   M 
Sbjct: 126 LINCFCRRSQIS--------------------------------------LALALLGKMM 147

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           +   +  IV  + L+NG+C    IS A A   QM++ G+ PD IT+ TL++ L    K  
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA      + + G  P+ ++Y  ++ GLC  GDI  A   L  M    +     I++ +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           D   +     +A ++   M + GV  NV T+++LI          DA  L  +M+   I 
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P+V T+N LI A    G +  A +LYDEM++R I PDI TY+ LI G C    + EA+ +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRN 571
           F  + +     + + +  L   + + K  D+     R++ Q+ L+ N
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 42/288 (14%)

Query: 82  NPQAV-FNAL-DLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
           NP  V FNAL D  +KE  L   + + D   ++ +++ D   + ++I   C+  ++  A 
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            +   MI K   P+V+T+N L+N  CK   +++   + REMS+     N  TY   I G+
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            +  + D A  +F  M ++G+ PN +T+N L+  LC                        
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC------------------------ 481

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
                         KNG   +A+ ++  + +  ++  I  YN++I G C  G +   +  
Sbjct: 482 --------------KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           FC +  +G  PDVI YNT+++  C++G  +EA   +  + + G  PD 
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 47/98 (47%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  GK+  A+ +   + +    P + T+N ++  +CK G +E    +   +S     P+
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
              YN  I+G+CR    ++A  LF  M  +G  P+  T
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score = 45.8 bits (107), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 40/80 (50%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  +E     +  +I  +C  GK+     L   +  KG  PDV+ +N +++  C+ G  E
Sbjct: 498 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKE 557

Query: 171 KADHVIREMSEMRPSPNCAT 190
           +AD + R+M E  P P+  T
Sbjct: 558 EADALFRKMREDGPLPDSGT 577


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 210/420 (50%), Gaps = 12/420 (2%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R +  VI  LC   +I  A+ +  KM ++   PD  ++  L++ L K G L  A ++ ++
Sbjct: 289 RGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQK 348

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           +     +P+   Y + I G C  N  D A  LF+ M   G  P+ VT+N+++ A CK+G+
Sbjct: 349 LLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 408

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L +A   + +++ D       DV+T   +MD   K+    +AL L+N+M +     +  +
Sbjct: 409 LEEACDLIKKMIEDGH---VPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRS 465

Query: 299 YNVLINGFCLN---------GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           +N +I G C           G +  AF    +M   G +PDV+TY+TL++ LC   ++D+
Sbjct: 466 HNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 525

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A H    + K    P  ++  T+I GLC  G I +ARE L +M+     P+   +N ++ 
Sbjct: 526 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 585

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G+ R G    A  +   M++ G++ NV T+ AL+    +   + +A  +  +M   G  P
Sbjct: 586 GHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 645

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           ++FTY  LI   C+ G +   L+L+ EM+  GI+PD + Y  L    C  G    A E+ 
Sbjct: 646 NLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 705



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 204/418 (48%), Gaps = 14/418 (3%)

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +N ++  LC+   +++A  +  +M+E   SP+  +Y   I G  +  +L+ A +LF  + 
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTILMDSYFKN 274
           ++G+ P+ V +  L+H LC      DA     E+ AD + +      +T  +++D+  K 
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDAR----ELFADMNRRGCPPSPVTYNVMIDASCKR 406

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +A  L   M +     D+V YN +++G C +  +  A   F +M + G  P+  ++
Sbjct: 407 GMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSH 466

Query: 335 NTLLNCLCKQ---------GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           NT++  LC+Q         GKLDEA      ++  G  PD ++Y T+I GLC    +  A
Sbjct: 467 NTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 526

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           R  L  M+++   P     N +I G  + G +  A  + D M+S G S +V T+N L+  
Sbjct: 527 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 586

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             R G    A  L  +M+  G+ P+V TY  L+   C    +  A  ++ +M   G  P+
Sbjct: 587 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 646

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           + TYT LI G C+ G +    ++F ++   G++ DH+ +  L     +   S +A +I
Sbjct: 647 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 704



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 235/497 (47%), Gaps = 20/497 (4%)

Query: 87  FNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQ 146
           F A +L L+ +++R   + +  PV      +   +  V+  LC   ++  AL L R M +
Sbjct: 119 FLAHELCLRGSMERAFQLLEIMPV-----ANSSAYNIVVVALCKAARVDDALELARTMSE 173

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           K  +P  L    L + L  + D  + D  ++   E R  P   T N  + G+C   ++DK
Sbjct: 174 K-RIP--LAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDK 230

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG--EVLADDDGKATSDVITS 264
           A  L   M +    P+ V++  ++  LCK G + +AV+  G  E+ +     ++   +  
Sbjct: 231 ARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRG 290

Query: 265 -TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             I++    +N    +A+ ++  M ++N+  D  +Y +LI+G    G ++ A   F ++L
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  P  + Y +L++ LC     D+A   +  +++ G  P  ++Y  +I   C  G + 
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 410

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A + +  M+E   VP+   +N ++DG  +   +  A  + + M   G + N  + N +I
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470

Query: 444 LA---------ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           L            + G + +AF L K M  DG  PDV TY+ LI   C++  +  A  L 
Sbjct: 471 LGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 530

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           ++M++R   P ++T   LI G C  G +KEA EV   + + G + D + +  L   + R 
Sbjct: 531 EDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 590

Query: 555 KESDKARDIHQKWLLRN 571
            ++++AR++    + R 
Sbjct: 591 GQTERARELLSDMVARG 607



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 189/424 (44%), Gaps = 47/424 (11%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PDV  +N L++ L K  + E    +++ M +    P+  T+   + G C+  ++D+A  +
Sbjct: 44  PDV--YNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELV 101

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M +  I P   T + L H LC +G +  A + L E++   +  A + V+ +      
Sbjct: 102 MDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLL-EIMPVANSSAYNIVVVALC---- 156

Query: 271 YFKNGDKFQALALWNDMFQKNI--------------------------------QTDIVA 298
             K      AL L   M +K I                                +  +V 
Sbjct: 157 --KAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVT 214

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG--- 355
            NVL+ GFC  G +  A      M      PD ++Y T+L+ LCK G+++EA   +G   
Sbjct: 215 LNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRE 274

Query: 356 ---VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
                S +   P    Y  +I GLC +  I +A +    M E++V P+   + ++IDG  
Sbjct: 275 LPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLA 334

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           + G L++A ++   +L  GV+ +   + +LI       S  DA  L  +M   G  P   
Sbjct: 335 KAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPV 394

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TYN++I ASC  G +  A  L  +M+  G  PD++TY  ++ G C    ++EA  +F ++
Sbjct: 395 TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 454

Query: 533 QTLG 536
           + LG
Sbjct: 455 ERLG 458



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 130/332 (39%), Gaps = 45/332 (13%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L E    LK M D G V      D   +  +I  LC   ++  A  L   M+++   P V
Sbjct: 488 LDEAFRLLKRMTDDGHV-----PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 542

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T N L++ LCK G +++A  V+  M     SP+  TYN  + G+CR  + ++A  L S 
Sbjct: 543 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSD 602

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G+ PN VT+  LV  LCK   L +A                               
Sbjct: 603 MVARGLAPNVVTYTALVSGLCKANRLPEAC------------------------------ 632

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                    ++  M       ++  Y  LI GFC  G +      F +M+  G  PD + 
Sbjct: 633 --------GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVV 684

Query: 334 YNTLLNCLCKQGKLDEASHFY--GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           Y TL   LCK G+   A      G  S    A     Y+  + GL   G +  A  F+  
Sbjct: 685 YGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRD 744

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           M+    +P P     ++ G  + G    A ++
Sbjct: 745 MVRGGQLPAPERCASLVAGLCKSGQGGEARAV 776



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 176/402 (43%), Gaps = 48/402 (11%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P+P    + + I G+C V    +A+ +FS M      P    +N+L+ +L K+    +AV
Sbjct: 8   PAP--LLFTSVIQGWCNVGRTFEAVKIFSLM-EECHSPYPDVYNVLIDSLSKRQET-EAV 63

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K + +V+ D       D  T T ++    K G   +A  + ++M  + I       + L 
Sbjct: 64  KKMVQVMVDRG--CFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLA 121

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  CL G +  AF    Q+L+   + +   YN ++  LCK  ++D+A      +S+  + 
Sbjct: 122 HELCLRGSMERAF----QLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIP 177

Query: 364 --------------------------------PDQISYKTIIQGLCIHGDIVKAREFLLS 391
                                           P  ++   +++G C  G + KARE L +
Sbjct: 178 LAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRA 237

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNA---FSIRDLMLSFGVSSNVFT---FNALILA 445
           M ++   P+   +  ++DG  + G +  A   F  R+L  S   SS+  +   +N +IL 
Sbjct: 238 MPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILG 297

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             +   I +A  + ++M    + PD ++Y +LI      G ++ A  L+ ++L  G+TP 
Sbjct: 298 LCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPS 357

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            + YT LI G C   +  +A E+FA +   G     + + ++
Sbjct: 358 TVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVM 399



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 1/139 (0%)

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           + G+ P  + + ++IQG C  G   +A + + S++E+   P P ++NV+ID   +  +  
Sbjct: 3   QQGIFPAPLLFTSVIQGWCNVGRTFEAVK-IFSLMEECHSPYPDVYNVLIDSLSKRQETE 61

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
               +  +M+  G   + FTF  ++    + G + +A  +  EM    I P   T + L 
Sbjct: 62  AVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLA 121

Query: 479 GASCNLGHIHLALQLYDEM 497
              C  G +  A QL + M
Sbjct: 122 HELCLRGSMERAFQLLEIM 140


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 219/445 (49%), Gaps = 5/445 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKM--IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           V++     G +  AL + R+M   +    PD  ++N ++  L + G    A  V  EM +
Sbjct: 163 VVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVD 222

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
           M  +PN  TYN  I G+ +  +L+    L   M ++G +PN VT+N+L+  LC+ G + +
Sbjct: 223 MGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDE 282

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
               + E+ +        D  T +IL D   + G+    L+L+ +  +K +       ++
Sbjct: 283 TRALMDEMASH---SMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSI 339

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L+NG C +G ++ A   F  ++  G +P  + YNTL+N  C+   L  A   +  +    
Sbjct: 340 LLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD I+Y  +I GLC    + KA + ++ M +  V P    +N +ID YG  G L   F
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 459

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           ++   M   G+ S+V +F +++ A  + G I +A ++  +M+   + P+   YN +I A 
Sbjct: 460 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
              G    AL L ++M   G++  I+TY  L+KG C    + EAEE+   ++  GL  D 
Sbjct: 520 IESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 579

Query: 542 IPFRILKKRYRRMKESDKARDIHQK 566
           + +  +        ++DKA ++ Q+
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQE 604



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 224/465 (48%), Gaps = 12/465 (2%)

Query: 104 MRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           M D G  P R T  T    HV        GG +     LR +M+  G  P+V+T+N L++
Sbjct: 220 MVDMGVAPNRITYNTMIDGHVK-------GGDLEAGFRLRDQMLHDGPKPNVVTYNVLLS 272

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP 221
            LC+ G +++   ++ EM+     P+  TY+    G  R  E    L LF+     G+  
Sbjct: 273 GLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVML 332

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
              T +IL++ LCK G +  A K + E+L    G   + VI +T L++ Y +  D   A 
Sbjct: 333 GAYTCSILLNGLCKDGKVAKA-KQVFEMLVHT-GLVPTTVIYNT-LINGYCQVRDLRGAF 389

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            ++  M  ++I+ D + YN LING C    ++ A     +M K G  P V T+NTL++  
Sbjct: 390 CIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAY 449

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
              G+L++       + + G+  D IS+ ++++  C +G I +A   L  M+ K V P  
Sbjct: 450 GTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNA 509

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
            ++N IID Y   GD   A  + + M + GVS+++ T+N L+    R   I +A  L   
Sbjct: 510 QVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYT 569

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           +   G+ PDV +YN +I A CN G    AL+L  EM + GI P + T   L+    + G 
Sbjct: 570 LRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGR 629

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           + + E ++ ++    +      + I+   Y R +   K   + ++
Sbjct: 630 VHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKE 674



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 176/374 (47%), Gaps = 3/374 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+  T L L  + ++KG +    T + L+N LCK G + KA  V   +      P    Y
Sbjct: 313 GESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIY 372

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYC+V +L  A  +F  M +  IRP+ +T+N L++ LCK  ++  A   + E+  
Sbjct: 373 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM-- 430

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            +       V T   L+D+Y   G   +   + +DM QK I++D++++  ++  FC NG 
Sbjct: 431 -EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I  A A    M+ +   P+   YN++++   + G  ++A      +  +GV+   ++Y  
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNL 549

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +++GLC    I +A E + ++  + + P+   +N II      GD   A  +   M  +G
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +   + T + L+ A    G + D   L ++ML   + P    Y +++ A     +     
Sbjct: 610 IRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVA 669

Query: 492 QLYDEMLRRGITPD 505
            L  EM  +GI  D
Sbjct: 670 SLKKEMSEKGIAFD 683



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 165/381 (43%), Gaps = 36/381 (9%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P P+ ++ N  +     V         F  +   G RP+    N +V A    G L  A+
Sbjct: 118 PLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVAL 177

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L   +   +G    D  +  +++   +++G    AL ++++M    +  + + YN +I
Sbjct: 178 AML-RRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMI 236

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G    GD+ + F    QML  G  P+V+TYN LL+ LC+ G++DE       ++   + 
Sbjct: 237 DGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSML 296

Query: 364 PDQISY-----------------------------------KTIIQGLCIHGDIVKAREF 388
           PD  +Y                                     ++ GLC  G + KA++ 
Sbjct: 297 PDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQV 356

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              ++   +VP   I+N +I+GY +  DL  AF I + M S  +  +  T+NALI    +
Sbjct: 357 FEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 416

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
              +  A  L  EM   G+ P V T+N LI A    G +     +  +M ++GI  D+I+
Sbjct: 417 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 476

Query: 509 YTELIKGHCARGNMKEAEEVF 529
           +  ++K  C  G + EA  + 
Sbjct: 477 FGSVVKAFCKNGKIPEAVAIL 497



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 2/259 (0%)

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N+L+      G  +   A F  ++  G  PD   +N ++      G LD A      + +
Sbjct: 126 NLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGR 185

Query: 360 TGVA--PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
           +  A  PD  SY  +I GL   G    A +    M++  V P    +N +IDG+ + GDL
Sbjct: 186 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDL 245

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
              F +RD ML  G   NV T+N L+    R G + +  +L  EM    + PD FTY++L
Sbjct: 246 EAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSIL 305

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
                  G     L L+ E L++G+     T + L+ G C  G + +A++VF  +   GL
Sbjct: 306 FDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGL 365

Query: 538 AIDHIPFRILKKRYRRMKE 556
               + +  L   Y ++++
Sbjct: 366 VPTTVIYNTLINGYCQVRD 384



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 2/206 (0%)

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           LP + + N LL  L   G+  +    +G+L   G  PD  ++  ++Q     GD+  A  
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 388 FLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            L  M      P P    +NV+I G  R G  S+A  + D M+  GV+ N  T+N +I  
Sbjct: 179 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             +GG +   F L+ +ML DG  P+V TYN+L+   C  G +     L DEM    + PD
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298

Query: 506 IITYTELIKGHCARGNMKEAEEVFAK 531
             TY+ L  G    G  +    +FA+
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAE 324


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 222/465 (47%), Gaps = 37/465 (7%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM   G  PDV T N L+  LC+   L  A  ++ +M      P+  T+   + GY    
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEG 238

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +LD AL +   M   G   + V+ N++VH  CK+G + DA+ F+ E +++ DG    D  
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE-MSNQDG-FFPDQY 296

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   L++   K G    A+ + + M Q+    D+  YN +I+G C  G++  A  +  QM
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQM 356

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           + R   P+ +TYNTL++ LCK+ +++EA+    VL+  G+ PD  ++ ++IQGLC+  + 
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416

Query: 383 VKAREFLLSMLEKSVVPEPHIWNV-----------------------------------I 407
             A E    M  K   P+   +N+                                   +
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           IDG+ +   +  A  I D M   GVS N  T+N LI    +   + DA  L  +M+++G 
Sbjct: 477 IDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQ 536

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PD FTYN L+   C  G I  A  +   M   G  PDI+TY  LI G C  G ++ A +
Sbjct: 537 KPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           +   IQ  G+A+    +  + +   R +++ +A ++ ++ L +N+
Sbjct: 597 LLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 209/436 (47%), Gaps = 5/436 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D +    +++     G +  AL +R +M++ G     ++ N +V+  CK G +E A 
Sbjct: 220 LVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279

Query: 174 HVIREMSEMRPS-PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
           + I+EMS      P+  T+N  + G C+   +  A+ +   M   G  P+  T+N ++  
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LCK G + +AV+FL +++  D    + + +T   L+ +  K     +A  L   +  K I
Sbjct: 340 LCKLGEVKEAVEFLDQMITRD---CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D+  +N LI G CL  +   A   F +M  +G  PD  TYN L++ LC +GKLDEA +
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               +  +G A   I+Y T+I G C    I +A E    M    V      +N +IDG  
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +   + +A  + D M+  G   + FT+N+L+    RGG I  A  + + M  +G  PD+ 
Sbjct: 517 KSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK- 531
           TY  LI   C  G + +A +L   +  +GI      Y  +I+G   +    EA  +F + 
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREM 636

Query: 532 IQTLGLAIDHIPFRIL 547
           ++    A D + +RI+
Sbjct: 637 LEQNEAAPDAVSYRIV 652



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 153/306 (50%), Gaps = 12/306 (3%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
            L R+ T +   P  CT  +       +I+ LCL      A+ L  +M  KG  PD  T+
Sbjct: 386 ELARVLTSKGILPDVCTFNS-------LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N L++ LC  G L++A +++++M     + +  TYN  I G+C+ N++ +A  +F  M  
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEV 498

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
           +G+  N VT+N L+  LCK   + DA + + +++ +       D  T   L+  + + GD
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQ---KPDKFTYNSLLTHFCRGGD 555

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A  +   M     + DIV Y  LI+G C  G +  A      +  +G       YN 
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNP 615

Query: 337 LLNCLCKQGKLDEASH-FYGVLSKTGVAPDQISYKTIIQGLCI-HGDIVKAREFLLSMLE 394
           ++  L ++ K  EA + F  +L +   APD +SY+ + +GLC   G I +A +FL+ +LE
Sbjct: 616 VIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLE 675

Query: 395 KSVVPE 400
           K  VPE
Sbjct: 676 KGFVPE 681



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 170/379 (44%), Gaps = 39/379 (10%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+   YN  +      N L       + M+  GI+P+  T N+L+ ALC+   L  A+  
Sbjct: 152 PDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L                                       DM    +  D   +  ++ G
Sbjct: 212 L--------------------------------------EDMPSYGLVPDEKTFTTIMQG 233

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS-KTGVAP 364
           +   GD+  A     QM++ G     ++ N +++  CK+G++++A +F   +S + G  P
Sbjct: 234 YIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP 293

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           DQ ++ T++ GLC  G +  A E +  ML++   P+ + +N +I G  + G++  A    
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFL 353

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           D M++   S N  T+N LI    +   + +A  L + +   GI PDV T+N LI   C  
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            +  +A++L++EM  +G  PD  TY  LI   C++G + EA  +  +++  G A   I +
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473

Query: 545 RILKKRYRRMKESDKARDI 563
             L   + +  +  +A +I
Sbjct: 474 NTLIDGFCKANKIREAEEI 492



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 15/196 (7%)

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
           D    R F L+  + +  PEP ++  I+   GR G   +   I + M + G       F 
Sbjct: 63  DSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPF- 121

Query: 441 ALILAETRGGSIFDAFSLKKEML------LD--GIFPDVFTYNLLIGASCNLGHIHLALQ 492
            LIL E+     +  F L+ E+L      +D  G+ PD   YN ++    +  ++ L   
Sbjct: 122 -LILIES-----YAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEI 175

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
            + +M   GI PD+ T+  LIK  C    ++ A  +   + + GL  D   F  + + Y 
Sbjct: 176 AHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYI 235

Query: 553 RMKESDKARDIHQKWL 568
              + D A  I ++ +
Sbjct: 236 EEGDLDGALRIREQMV 251


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 209/404 (51%), Gaps = 6/404 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+IG   ++ ++MI++   P +++ N ++N LCK+G L KA  +I +M     S N  TY
Sbjct: 142 GEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITY 201

Query: 192 NAFITGYCR---VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
           N  I GYC+   + ++ KA  +   M  +GI PN VT NIL+   CK   +  A+K   E
Sbjct: 202 NTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAE 261

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +   +      +V+T   L++    NG   +A AL + M    ++ +I+ +N L+NGFC 
Sbjct: 262 M---NRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCK 318

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           N  +  A   F  M K+G  P+V TYN L++  CK   +++A   Y ++   GV PD  +
Sbjct: 319 NKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVST 378

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I GLC  GD+  AR  +  M  K +  +   +N++ID     G++  A  + D M 
Sbjct: 379 YNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMC 438

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G+  +  T+N +I    + G++  A +L+ +M   G   +V TYN+LI   C    + 
Sbjct: 439 RKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLE 498

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            A  L +EML +G+ P+ +TY  + +    +G + + E    K+
Sbjct: 499 DANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKV 542



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/386 (31%), Positives = 201/386 (52%), Gaps = 22/386 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC---KIGDLEKADHVIREMS 180
           VI  LC  GK+  A  +   M  +G   +V+T+N L++  C   KIG + KAD +++EM 
Sbjct: 169 VINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMR 228

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  T+N  I G+C+   +  A+ +F+ M   G++PN VT+N L++ LC  G + 
Sbjct: 229 ADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVN 288

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A     +++   +     ++IT   L++ + KN    QA  L++DM ++ I  ++  YN
Sbjct: 289 EATALRDQMV---NSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYN 345

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI+ +C + ++  AFA +  ML +G  PDV TYN L+  LC++G L+ A +    +   
Sbjct: 346 ILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTK 405

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            +  D I+Y  +I  LC  G++ KA   L  M  K + P    +N +IDGY + G+L  A
Sbjct: 406 HLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAA 465

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
            ++R  M   G  +NV T+N LI    +   + DA  L  EML  G+ P+  TY ++   
Sbjct: 466 LNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVT-- 523

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDI 506
                         +EM+ +G  PDI
Sbjct: 524 --------------EEMMEKGFVPDI 535



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 208/399 (52%), Gaps = 35/399 (8%)

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V + N L++ L K+G++   + V +EM   R  P   ++N  I G C+V +L+KA  +  
Sbjct: 128 VTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIE 187

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M   G+  N +T+N L+   CK G                                   
Sbjct: 188 DMKVRGVSANVITYNTLIDGYCKMG----------------------------------- 212

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G  ++A A+  +M    I  + V +N+LI+GFC + ++S+A   F +M ++G  P+V+
Sbjct: 213 KIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVV 272

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TYN+L+N LC  GK++EA+     +  + + P+ I++  ++ G C +  + +A E    M
Sbjct: 273 TYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDM 332

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
            ++ + P    +N++ID Y +  ++ +AF++  +ML  GV  +V T+N LI    R G +
Sbjct: 333 PKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDL 392

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             A +L  EM    +  D+ TYN+LI + CN G +  AL+L DEM R+G+ P  +TY  +
Sbjct: 393 EAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTM 452

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           I G+C  GN++ A  + ++++ +G   +   + +L K +
Sbjct: 453 IDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGF 491



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 153/288 (53%), Gaps = 21/288 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC  GK+  A  LR +M+     P+++THN L+N  CK   +++A  +  +M + 
Sbjct: 276 SLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQ 335

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +PN  TYN  I  YC+   ++ A  L+  M   G+ P+  T+N L+  LC+KG L  A
Sbjct: 336 GITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAA 395

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              + E+   D     +D+IT  IL+DS    G+  +AL L ++M +K ++   + YN +
Sbjct: 396 RNLVSEM---DTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTM 452

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G+C  G++ +A     QM K G L +V TYN L+   CK+ KL++A+     + + G+
Sbjct: 453 IDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGL 512

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP--EPHIWNVII 408
            P++++Y+ + +                 M+EK  VP  E H++ V +
Sbjct: 513 IPNRMTYEIVTE----------------EMMEKGFVPDIEGHLYKVAV 544



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 153/310 (49%), Gaps = 10/310 (3%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           LK MR  G   C  E  +     +I   C    +  A+ +  +M ++G  P+V+T+N L+
Sbjct: 224 LKEMRADGI--CPNEVTFN---ILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLI 278

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           N LC  G + +A  +  +M      PN  T+NA + G+C+   + +A  LF  M   GI 
Sbjct: 279 NGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGIT 338

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT-SDVITSTILMDSYFKNGDKFQ 279
           PN  T+NIL+ A CK   + DA      +L    GK    DV T   L+    + GD   
Sbjct: 339 PNVTTYNILIDAYCKDENMEDAFALYRIML----GKGVCPDVSTYNCLIAGLCRKGDLEA 394

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  L ++M  K+++ D++ YN+LI+  C  G++  A     +M ++G  P  +TYNT+++
Sbjct: 395 ARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMID 454

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             CK+G L  A +    + K G   +  +Y  +I+G C    +  A   L  MLEK ++P
Sbjct: 455 GYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIP 514

Query: 400 EPHIWNVIID 409
               + ++ +
Sbjct: 515 NRMTYEIVTE 524



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 123/258 (47%), Gaps = 3/258 (1%)

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           +  ++L+  +  N      F  F +    G    V + N L++ L K G++ +    Y  
Sbjct: 94  IIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKE 153

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY---GR 413
           + +  + P  IS+  +I GLC  G + KA + +  M  + V      +N +IDGY   G+
Sbjct: 154 MIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGK 213

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G +  A +I   M + G+  N  TFN LI    +  ++  A  +  EM   G+ P+V T
Sbjct: 214 IGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVT 273

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN LI   CN G ++ A  L D+M+   + P+IIT+  L+ G C    +K+A E+F  + 
Sbjct: 274 YNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMP 333

Query: 534 TLGLAIDHIPFRILKKRY 551
             G+  +   + IL   Y
Sbjct: 334 KQGITPNVTTYNILIDAY 351



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 2/157 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  LC  G +  A  L  +M  K    D++T+N L++ LC  G+++KA  ++
Sbjct: 375 DVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLL 434

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P+  TYN  I GYC+   L  AL+L S M   G   N  T+N+L+   CKK
Sbjct: 435 DEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKK 494

Query: 237 GLLGDAVKFLGEVLADD--DGKATSDVITSTILMDSY 271
             L DA   L E+L       + T +++T  ++   +
Sbjct: 495 DKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGF 531



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 73/128 (57%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  +I  LC  G++  AL L  +M +KG  P  LT+N +++  CK G+L  A 
Sbjct: 407 LKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAAL 466

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           ++  +M ++    N ATYN  I G+C+ ++L+ A  L + M   G+ PNR+T+ I+   +
Sbjct: 467 NLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEM 526

Query: 234 CKKGLLGD 241
            +KG + D
Sbjct: 527 MEKGFVPD 534


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 206/404 (50%), Gaps = 3/404 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++  A  L+ +M +KG  P   T+  L+  LC  G ++KA ++  EM    
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARG 331

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY   I G CR  ++++A  +   M  +GI P+ +T+N L++  CK G +  A 
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAF 391

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L  +   +      +V T   LM+   + G  ++A+ L   M    +  DIV+YNVLI
Sbjct: 392 ELLTVM---EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLI 448

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G ++ A+     M      PD +T+  ++N  CKQGK D AS F G++ + G++
Sbjct: 449 DGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D+++  T+I G+C  G    A   L ++++  ++  PH  NVI+D   +   L    ++
Sbjct: 509 LDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAM 568

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              +   G+  +V T+  L+    R G I  +F + + M L G  P+V+ Y ++I   C 
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQ 628

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            G +  A +L   M   G++P+ +TYT ++KG+   G +  A E
Sbjct: 629 FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 222/500 (44%), Gaps = 74/500 (14%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD---------------HVIREM------- 179
           R+M   G V  ++ +  +VN LCK G  E A+               H++  +       
Sbjct: 184 RRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRG 243

Query: 180 --------------SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
                          E   +PN  +Y+  I G C V  L++A  L   M   G +P+  T
Sbjct: 244 LNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
           + +L+ ALC +GL+  A     E++A        +V T T+L+D   ++G   +A  +  
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIARG---CKPNVHTYTVLIDGLCRDGKIEEANGVCR 360

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M +  I   ++ YN LING+C +G +  AF     M KR   P+V T+N L+  LC+ G
Sbjct: 361 KMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           K  +A H    +   G++PD +SY  +I GLC  G +  A + L SM    + P+   + 
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFT 480

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI-----LAETRGG---------- 450
            II+ + + G    A +   LML  G+S +  T   LI     + +TR            
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKM 540

Query: 451 ----------SIFDAFS----LKKEMLL------DGIFPDVFTYNLLIGASCNLGHIHLA 490
                      I D  S    LK+E+ +       G+ P V TY  L+      G I  +
Sbjct: 541 RMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGS 600

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
            ++ + M   G  P++  YT +I G C  G ++EAE++ + +Q  G++ +H+ + ++ K 
Sbjct: 601 FRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660

Query: 551 YRRMKESDKARDIHQKWLLR 570
           Y    + D+A +  +  + R
Sbjct: 661 YVNNGKLDRALETVRAMVER 680



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 204/425 (48%), Gaps = 11/425 (2%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R +  +I+ LC  G I  A  L  +MI +G  P+V T+  L++ LC+ G +E+A+ V R+
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M +    P+  TYNA I GYC+   +  A  L + M     +PN  T N L+  LC+ G 
Sbjct: 362 MVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
              AV  L  +L   D   + D+++  +L+D   + G    A  L   M   +++ D + 
Sbjct: 422 PYKAVHLLKRML---DNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLT 478

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           +  +IN FC  G    A A+   ML++G   D +T  TL++ +C  GK  +A      L 
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLV 538

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYGRCGDL 417
           K  +     S   I+  L   G  +K    +L  + K  +VP    +  ++DG  R GD+
Sbjct: 539 KMRMLTTPHSLNVILDMLS-KGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
           S +F + +LM   G   NV+ +  +I    + G + +A  L   M   G+ P+  TY ++
Sbjct: 598 SGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVM 657

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC-ARGNMKEAE-----EVFAK 531
           +    N G +  AL+    M+ RG   +   Y+ L++G   ++  ++E +     E+ + 
Sbjct: 658 VKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISV 717

Query: 532 IQTLG 536
           ++ LG
Sbjct: 718 VEQLG 722



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 181/368 (49%), Gaps = 6/368 (1%)

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           +RE+S  R +  C  Y++ +    +++    A   +  M  +G     + +  +V+ALCK
Sbjct: 150 LREVSGFRLNYPC--YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCK 207

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI-QT 294
            G    A  F+ ++L        S ++TS +L   + +  +   AL +++ M ++     
Sbjct: 208 NGYTEAAEMFMCKIL-KVGFLLDSHIVTSLLL--GFCRGLNLRDALKVFDLMSREGTCAP 264

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           + V+Y++LI+G C  G +  AF    QM ++G  P   TY  L+  LC +G +D+A + +
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G  P+  +Y  +I GLC  G I +A      M++  + P    +N +I+GY + 
Sbjct: 325 DEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKD 384

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G +  AF +  +M       NV TFN L+    R G  + A  L K ML +G+ PD+ +Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N+LI   C  GH+++A +L   M    + PD +T+T +I   C +G    A      +  
Sbjct: 445 NVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504

Query: 535 LGLAIDHI 542
            G+++D +
Sbjct: 505 KGISLDEV 512



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 218/488 (44%), Gaps = 77/488 (15%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  GKI  A  + RKM++ G  P V+T+N L+N  CK G +  A  ++  M 
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVME 398

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  T+N  + G CRV +  KA+HL   M +NG+ P+ V++N+L+  LC++G + 
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMN 458

Query: 241 DAVKFLGEVLADD-----------------DGKA---------------TSDVITSTILM 268
            A K L  + + D                  GKA               + D +T T L+
Sbjct: 459 VAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518

Query: 269 DSYFKNGDKFQALALWN------------------DMFQKNIQ----------------- 293
           D     G    AL +                    DM  K  +                 
Sbjct: 519 DGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLV 578

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             +V Y  L++G   +GDIS +F     M   G LP+V  Y  ++N LC+ G+++EA   
Sbjct: 579 PSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKL 638

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY-- 411
              +  +GV+P+ ++Y  +++G   +G + +A E + +M+E+       I++ ++ G+  
Sbjct: 639 LSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVL 698

Query: 412 -GRCGDLSNAFSIRDLMLSF----GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
             +    ++   I++L+       G +S +  F  L+    + G   ++  L + +L  G
Sbjct: 699 SQKGIRETDPECIKELISVVEQLGGSTSGLCIF--LVTRLCKEGRTDESNGLVQTILKSG 756

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           +F +    ++++ + C+       ++L   +L+ G  P   ++  +I+G    G+ + A 
Sbjct: 757 VFLEK-AIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERAR 815

Query: 527 EVFAKIQT 534
           E+  ++ T
Sbjct: 816 ELVMELLT 823



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/367 (22%), Positives = 148/367 (40%), Gaps = 55/367 (14%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE D     A+I   C  GK   A      M++KG   D +T   L++ +C +G    A 
Sbjct: 472 LEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDAL 531

Query: 174 HVIREMSEMR----PS-------------------------------PNCATYNAFITGY 198
            ++  + +MR    P                                P+  TY   + G 
Sbjct: 532 FILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGL 591

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            R  ++  +  +   M  +G  PN   + I+++ LC+ G + +A K L    A  D   +
Sbjct: 592 IRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLS---AMQDSGVS 648

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD------- 311
            + +T T+++  Y  NG   +AL     M ++  + +   Y+ L+ GF L+         
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDP 708

Query: 312 --ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
             I    +   Q+   G    +  +  L+  LCK+G+ DE++     + K+GV  ++ + 
Sbjct: 709 ECIKELISVVEQL--GGSTSGLCIF--LVTRLCKEGRTDESNGLVQTILKSGVFLEK-AI 763

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             I++  C      K  E +  +L+   VP    + ++I G  + GD   A   R+L++ 
Sbjct: 764 DIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERA---RELVME 820

Query: 430 FGVSSNV 436
              S+ V
Sbjct: 821 LLTSNGV 827



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 128/299 (42%), Gaps = 7/299 (2%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           G K+   L +  K+ + G VP V+T+  LV+ L + GD+  +  ++  M      PN   
Sbjct: 559 GCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYP 618

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA---VKFLG 247
           Y   I G C+   +++A  L S M ++G+ PN VT+ ++V      G L  A   V+ + 
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMV 678

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E   + + +  S ++   +L     +  D      L + + Q    T  +    L+   C
Sbjct: 679 ERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCI-FLVTRLC 737

Query: 308 LNGDISSAFAYFCQMLKRG-FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
             G    +      +LK G FL   I  + ++   C + K  +      ++ K+G  P  
Sbjct: 738 KEGRTDESNGLVQTILKSGVFLEKAI--DIIMESYCSKKKHTKCVELITLVLKSGFVPSF 795

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            S+  +IQGL   GD  +ARE ++ +L  + V E       ++     GD S    + D
Sbjct: 796 KSFCLVIQGLKKEGDTERARELVMELLTSNGVVEKSGVLPYVECLMETGDCSEVIDLVD 854


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 205/368 (55%), Gaps = 9/368 (2%)

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS-DVITSTILM 268
           ++  M    I  N VT +++++ LCK G    A    G+V+ D      S  VIT   ++
Sbjct: 216 VYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA----GDVVEDMKAWGFSPSVITYNTII 271

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           D Y K G  F+A AL  +M  K I  + + +N+LI+GFC + ++++A   F +M ++G  
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+V+TYN+L+N LC  GKLDEA      +S  G+ P+ ++Y  +I G C    + +ARE 
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  + ++ + P    +N +ID YG+ G + +AF +R +ML  GV  NV T+N LI+   R
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G++ +A  L KEM  +G+  D+ TYN+L+ A C  G    A++L DEM   G+ P  +T
Sbjct: 452 EGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLT 511

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDK-ARDIH 564
           Y  LI G+   GN   A  V   ++  G   + + + +L K +    +++E+++   ++ 
Sbjct: 512 YNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEML 571

Query: 565 QKWLLRNK 572
           +K L+ N+
Sbjct: 572 EKGLIPNR 579



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 197/378 (52%), Gaps = 3/378 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+IG    + ++MI++    +V+T + ++N LCK+G  +KA  V+ +M     SP+  TY
Sbjct: 208 GRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITY 267

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYC+  ++ KA  L   M    I PN +T NIL+   C+   +  A K   E+  
Sbjct: 268 NTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR 327

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   +V+T   L++    NG   +AL L + M    ++ ++V YN LINGFC    
Sbjct: 328 QG---LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKM 384

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A      + KRG  P+VIT+NTL++   K G++D+A     ++  TGV P+  +Y  
Sbjct: 385 LKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNC 444

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G C  G++ +AR+    M    +  +   +N+++D   + G+   A  + D M   G
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVG 504

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           ++ +  T+NALI    R G+   A +++  M   G   ++ TYN+LI   CN G +  A 
Sbjct: 505 LNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEAN 564

Query: 492 QLYDEMLRRGITPDIITY 509
           +L +EML +G+ P+  TY
Sbjct: 565 RLLNEMLEKGLIPNRTTY 582



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 189/383 (49%), Gaps = 19/383 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC  GK   A  +   M   G  P V+T+N +++  CK G + KAD +++EM   R
Sbjct: 235 VINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR 294

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T+N  I G+CR   +  A  +F  M   G++PN VT+N L++ LC  G L +A+
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEAL 354

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               ++          +V+T   L++ + K     +A  + +D+ ++ +  +++ +N LI
Sbjct: 355 GLQDKM---SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           + +   G +  AF     ML  G  P+V TYN L+   C++G + EA      +   G+ 
Sbjct: 412 DAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLK 471

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D ++Y  ++  LC  G+  KA   L  M E  + P    +N +IDGY R G+ + A ++
Sbjct: 472 ADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNV 531

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
           R LM   G  +N+ T+N LI      G + +A  L  EML  G+ P+  TY++       
Sbjct: 532 RTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI------- 584

Query: 484 LGHIHLALQLYDEMLRRGITPDI 506
                    L DEM+ +G  PDI
Sbjct: 585 ---------LRDEMMEKGFIPDI 598



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 202/442 (45%), Gaps = 19/442 (4%)

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNE------LC-------KIGDLEKADHVIREMS 180
           I    W + K I K T P  L  +   +E      LC       + G +   +   R + 
Sbjct: 56  IAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLH 115

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKA--LHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
            +  + N     A +  + +      +   H  S + + G   N +  ++LV A  K G 
Sbjct: 116 LLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGC-ANSIIVDMLVWAYVKNGE 174

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           +  A++  G   A D G   S +  + +L+ S  K G      +++ +M ++ I  ++V 
Sbjct: 175 MDLALE--GFDRAGDYGFRLSALSCNPMLV-SLVKEGRIGVVESVYKEMIRRRIGVNVVT 231

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           ++V+ING C  G    A      M   GF P VITYNT+++  CK GK+ +A      + 
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
              + P++I++  +I G C   ++  A++    M  + + P    +N +I+G    G L 
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  ++D M   G+  NV T+NALI    +   + +A  +  ++   G+ P+V T+N LI
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            A    G +  A  L   ML  G+ P++ TY  LI G C  GN+KEA ++  +++  GL 
Sbjct: 412 DAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLK 471

Query: 539 IDHIPFRILKKRYRRMKESDKA 560
            D + + IL     +  E+ KA
Sbjct: 472 ADLVTYNILVDALCKKGETRKA 493



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 160/300 (53%), Gaps = 21/300 (7%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L+ +   + ++I  LC  GK+  AL L+ KM   G  P+V+T+N L+N  CK   L+
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  ++ ++ +   +PN  T+N  I  Y +   +D A  L S M + G+ PN  T+N L+
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
              C++G + +A K   E+   +     +D++T  IL+D+  K G+  +A+ L ++MF+ 
Sbjct: 447 VGFCREGNVKEARKLAKEM---EGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEV 503

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            +    + YN LI+G+   G+ ++A      M K+G   +++TYN L+   C +GKL+EA
Sbjct: 504 GLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEA 563

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP--EPHIWNVII 408
           +     + + G+ P++ +Y           DI++       M+EK  +P  + H++NV I
Sbjct: 564 NRLLNEMLEKGLIPNRTTY-----------DILRDE-----MMEKGFIPDIDGHLYNVSI 607



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 134/295 (45%), Gaps = 39/295 (13%)

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           ++++ N   F +L++       N     +  ++L+  +  NG++  A   F +    GF 
Sbjct: 136 NAHYSNSTIFHSLSVLGSWGCANS----IIVDMLVWAYVKNGEMDLALEGFDRAGDYGFR 191

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
              ++ N +L  L K+G++      Y  + +  +  + +++  +I GLC           
Sbjct: 192 LSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLC----------- 240

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
                                   + G    A  + + M ++G S +V T+N +I    +
Sbjct: 241 ------------------------KVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCK 276

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +F A +L KEM+   I P+  T+N+LI   C   ++  A ++++EM R+G+ P+++T
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           Y  LI G C+ G + EA  +  K+  +GL  + + +  L   + + K   +AR++
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 14/199 (7%)

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           S  TI   L + G    A   ++ ML  + V    + ++ ++G+ R GD           
Sbjct: 140 SNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEM-DLALEGFDRAGD----------- 187

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
             +G   +  + N ++++  + G I    S+ KEM+   I  +V T++++I   C +G  
Sbjct: 188 --YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKF 245

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A  + ++M   G +P +ITY  +I G+C  G M +A+ +  ++    +  + I F IL
Sbjct: 246 QKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNIL 305

Query: 548 KKRYRRMKESDKARDIHQK 566
              + R +    A+ + ++
Sbjct: 306 IDGFCRDENVTAAKKVFEE 324



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 5/148 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           +KE     K M   G     L+ D   +  ++  LC  G+   A+ L  +M + G  P  
Sbjct: 455 VKEARKLAKEMEGNG-----LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSH 509

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           LT+N L++   + G+   A +V   M +     N  TYN  I G+C   +L++A  L + 
Sbjct: 510 LTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNE 569

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGD 241
           M   G+ PNR T++IL   + +KG + D
Sbjct: 570 MLEKGLIPNRTTYDILRDEMMEKGFIPD 597


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/415 (32%), Positives = 207/415 (49%), Gaps = 8/415 (1%)

Query: 142  RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
            R+M   G  PDV   N ++  L      +    V  EM E+   P+  TYN  +  + + 
Sbjct: 1073 REMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKE 1132

Query: 202  NELDKALHLFSTMAN--NGIRPNRVTHNILVHALCKKGLLGDAVKFL-GEVLADDDGKAT 258
               DK   L   M    +G  PN VT+N+++  L +KG L +A + + G  L+      T
Sbjct: 1133 GRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFT 1192

Query: 259  SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
             + + + +L     K     Q      +M  + I   +V YN +I+G   +G + +A   
Sbjct: 1193 YNPLITGLLARGCVKKVYDLQL-----EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 1247

Query: 319  FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
            F +M   G LPDVITYN+LLN  CK G L EA   +G L + G+AP  ++Y  +I G C 
Sbjct: 1248 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 1307

Query: 379  HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
             GD+ +AR     M E+  +P    + +++ G      L+ A    D MLS G+  + F 
Sbjct: 1308 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFA 1367

Query: 439  FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
            +N  I AE   G I  AF L++ ++L+GI  D  TYN+LI   C  G++  A +L  +M+
Sbjct: 1368 YNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMV 1427

Query: 499  RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
              G+ PD ITYT LI  HC RG ++EA ++F  + + GL    + F ++   Y R
Sbjct: 1428 SNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCR 1482



 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 211/439 (48%), Gaps = 39/439 (8%)

Query: 148  GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
            G +P+ +T+N ++  L + GDLE+A  ++  M  +    +  TYN  ITG      + K 
Sbjct: 1151 GCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKV 1209

Query: 208  LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
              L   M N GI P  VT+N ++H L + GL+  A     E+ A        DVIT   L
Sbjct: 1210 YDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRA---MGLLPDVITYNSL 1266

Query: 268  MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF----------- 316
            ++ Y K G+  +AL L+ D+ +  +   ++ YN+LI+G+C  GD+  A            
Sbjct: 1267 LNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGC 1326

Query: 317  ------------------------AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
                                     +F +ML +G  PD   YNT +      G +  A  
Sbjct: 1327 LPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFE 1386

Query: 353  FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               VL   G++ D ++Y  +I GLC  G++  A+E  + M+   + P+   +  +I  + 
Sbjct: 1387 LREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHC 1446

Query: 413  RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
              G L  A  I + M+S G+  +  TF  +I A  R G+++ A+   ++ML +G+ P+  
Sbjct: 1447 ERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEI 1506

Query: 473  TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            TYN+LI A C +G   LA   + EML RG+  +  TYT LI G+C  GN ++A   + ++
Sbjct: 1507 TYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEM 1566

Query: 533  QTLGLAIDHIPFRILKKRY 551
               G+  D++  + L K +
Sbjct: 1567 HQNGIHPDYLTHKALLKGF 1585



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 226/447 (50%), Gaps = 11/447 (2%)

Query: 117  DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
            D  R + V+RD      I     +  +M++ G  P ++T+N L++   K G  +K   ++
Sbjct: 1086 DCNRVLRVLRDAARWDDICA---VHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLL 1142

Query: 177  REMSEMRPS---PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +EM E R S   PN  TYN  ITG  R  +L++A  L   M  +  + +  T+N L+  L
Sbjct: 1143 KEM-ETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-KASSFTYNPLITGL 1200

Query: 234  CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
              +G +        E+  +++G   + V+T   ++    ++G    A   + +M    + 
Sbjct: 1201 LARGCVKKVYDLQLEM--ENEGIMPT-VVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLL 1257

Query: 294  TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             D++ YN L+NG+C  G++  A   F  + + G  P V+TYN L++  C+ G L+EA   
Sbjct: 1258 PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARIL 1317

Query: 354  YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
               + + G  P+  +Y  +++G      +  AREF   ML K + P+   +N  I     
Sbjct: 1318 KEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELI 1377

Query: 414  CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             GD++ AF +R++++  G+SS+  T+N LI    + G++ DA  L+ +M+ +G+ PD  T
Sbjct: 1378 LGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCIT 1437

Query: 474  YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            Y  LI A C  G +  A ++++ M+  G+ P  +T+T +I  +C RGN+  A   F K+ 
Sbjct: 1438 YTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKML 1497

Query: 534  TLGLAIDHIPFRILKKRYRRMKESDKA 560
              G+  + I + +L     RM  +  A
Sbjct: 1498 EEGVEPNEITYNVLIHALCRMGRTQLA 1524



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 126/237 (53%), Gaps = 3/237 (1%)

Query: 143  KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
            +M+ KG  PD   +N  +     +GD+ +A  +   +     S +  TYN  I G C+  
Sbjct: 1355 EMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTG 1414

Query: 203  ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
             L  A  L   M +NG++P+ +T+  L+HA C++GLL +A K    +++D         +
Sbjct: 1415 NLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDG---LLPSAV 1471

Query: 263  TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
            T T+++ +Y + G+ + A   +  M ++ ++ + + YNVLI+  C  G    A  +F +M
Sbjct: 1472 TFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEM 1531

Query: 323  LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            L+RG + +  TY  L++  CK G  ++A  FY  + + G+ PD +++K +++G   H
Sbjct: 1532 LERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGFDGH 1588



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 5/196 (2%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            +I  LC  G +  A  L+ KM+  G  PD +T+  L++  C+ G L +A  +   M    
Sbjct: 1406 LIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDG 1465

Query: 184  PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              P+  T+   I  YCR   L  A   F  M   G+ PN +T+N+L+HALC+ G    A 
Sbjct: 1466 LLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAS 1525

Query: 244  KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
                E+L   +    ++  T T+L+D   K G+   A+  + +M Q  I  D + +  L+
Sbjct: 1526 HHFHEML---ERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALL 1582

Query: 304  NGFCLNGDISSAFAYF 319
             GF  +G +     Y 
Sbjct: 1583 KGF--DGHVHHTIEYL 1596


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 220/413 (53%), Gaps = 5/413 (1%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
            A+ L ++M+ KG  P + T +  +N  C +G++  A  V+  + +    PN  T    +
Sbjct: 102 VAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVM 161

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   E+ KA+     +A  G+  + V +  L++ LCK G   DA + L E+    +G
Sbjct: 162 KGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEM----EG 217

Query: 256 KAT-SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           +    +++   +++DS+ K+    +A  L+  +    I  DI+ Y  LI GFC  G    
Sbjct: 218 QVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGE 277

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
                C+M+ +   P+V T+N L++  C++GK+ EA   + ++ K G  PD +++ T+I 
Sbjct: 278 VKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLIS 337

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C+HG++++AR+   ++ E+ ++P+   + ++I GY +C  +  A S+ + M    +  
Sbjct: 338 GHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVL 397

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           ++  +++LI    + G I  A+ L   +  DG  P+V TYN+LI A C +  I + ++L+
Sbjct: 398 DIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELF 457

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             M  +G+TP ++TY  LI G+C    ++EA  + + +Q+  LA D I +  L
Sbjct: 458 KLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSL 510



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 205/431 (47%), Gaps = 19/431 (4%)

Query: 87  FNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQ 146
           F+ L ++LK         R   P   TL T       V++ LC+ G++  A+     +  
Sbjct: 139 FSVLGIVLK---------RGYQPNNITLTT-------VMKGLCINGEVQKAMDFHDNVAA 182

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           +G + D + +  L+N LCKIG    A  +++EM      PN   YN  I  +C+     K
Sbjct: 183 QGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCK 242

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A  L+  + + GI P+ +T+  L+   C+ G  G+  + + E++   +     +V T  +
Sbjct: 243 ARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMV---NKNINPNVYTFNV 299

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+D++ + G   +A  ++N M ++  Q DIV +N LI+G CL+G++  A   F  + +RG
Sbjct: 300 LIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERG 359

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            LPDV +Y  L+   CK  ++DEA   +  +    +  D + Y ++I GLC  G I  A 
Sbjct: 360 ILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAW 419

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E   ++      P    +N++ID + +  D+     +  LM   G++  V T+N LI   
Sbjct: 420 ELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGY 479

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            +   I +A +L   M    + PD  TYN L    C  G I  A +L+  M   G   D+
Sbjct: 480 CKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDV 539

Query: 507 ITYTELIKGHC 517
            TY  L+   C
Sbjct: 540 ATYNVLLDAFC 550



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 205/428 (47%), Gaps = 3/428 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G++G A  +   ++++G  P+ +T   ++  LC  G+++KA      ++      + 
Sbjct: 130 CHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDE 189

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             Y   I G C++     A  L   M    ++PN V +N+++ + CK  L   A     +
Sbjct: 190 VCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLK 249

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           ++   D     D++T T L+  + + G   +   L  +M  KNI  ++  +NVLI+ FC 
Sbjct: 250 IV---DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCR 306

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G +  A   F  M+KRG  PD++T+NTL++  C  G + EA   +  + + G+ PD  S
Sbjct: 307 KGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWS 366

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I G C    I +A      M  K++V +  +++ +IDG  + G +S A+ +   + 
Sbjct: 367 YTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTIN 426

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           + G   NV T+N LI A  +   I     L K M   G+ P V TYN+LI   C    I 
Sbjct: 427 NDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIR 486

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A+ L   M  + + PD ITY  L  G C  G + +A E+F  +   G  +D   + +L 
Sbjct: 487 EAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLL 546

Query: 549 KRYRRMKE 556
             + + ++
Sbjct: 547 DAFCKAQD 554



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 194/403 (48%), Gaps = 3/403 (0%)

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           L     ++ A  +   +  M+P P+   +N  I    ++     A+ L   M   G+ P+
Sbjct: 59  LSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPS 118

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
             T +I ++  C  G +G A   LG VL         + IT T +M     NG+  +A+ 
Sbjct: 119 IFTLSIWINCYCHLGEMGFAFSVLGIVLKRG---YQPNNITLTTVMKGLCINGEVQKAMD 175

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
             +++  + +  D V Y  LING C  G    AF    +M  +   P+++ YN +++  C
Sbjct: 176 FHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFC 235

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K     +A   Y  +   G+ PD ++Y ++I+G C  G   + ++ +  M+ K++ P  +
Sbjct: 236 KDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVY 295

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +NV+ID + R G +  A  + +LM+  G   ++ TFN LI      G++ +A  L   +
Sbjct: 296 TFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTV 355

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
              GI PDV++Y +LI   C    I  A+ L++EM  + +  DI+ Y+ LI G C  G +
Sbjct: 356 FERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRI 415

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
             A E+F+ I   G   + I + IL   + ++++ D   ++ +
Sbjct: 416 SYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFK 458



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 168/334 (50%), Gaps = 9/334 (2%)

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DAV     ++   + +    VI    ++ S  K      A++L   M  K +   I   +
Sbjct: 67  DAVTLFNHLI---NMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLS 123

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           + IN +C  G++  AF+    +LKRG+ P+ IT  T++  LC  G++ +A  F+  ++  
Sbjct: 124 IWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQ 183

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+  D++ Y T+I GLC  G  + A + L  M  + V P   I+N+IID +  C D    
Sbjct: 184 GMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSF--CKDELTC 241

Query: 421 FSIRDLMLS---FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
              RDL L     G+  ++ T+ +LI    R G   +   L  EM+   I P+V+T+N+L
Sbjct: 242 -KARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVL 300

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I A C  G +  A  +++ M++RG  PDI+T+  LI GHC  GN+ EA ++F  +   G+
Sbjct: 301 IDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGI 360

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             D   + IL   Y + K  D+A  +  +   +N
Sbjct: 361 LPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKN 394



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 131/260 (50%), Gaps = 3/260 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  GK+  A  +   M+++G  PD++T N L++  C  G++ +A  +   + E 
Sbjct: 299 VLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFER 358

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  +Y   I GYC+   +D+A+ LF+ M    +  + V ++ L+  LCK G +  A
Sbjct: 359 GILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYA 418

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +    +  ++DG    +VIT  IL+D++ K  D    + L+  M  K +   ++ YN+L
Sbjct: 419 WELFSTI--NNDGPP-PNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNIL 475

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING+C +  I  A      M  +   PD ITYN+L + LCK G++ +A   + V+   G 
Sbjct: 476 INGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGP 535

Query: 363 APDQISYKTIIQGLCIHGDI 382
             D  +Y  ++   C   D+
Sbjct: 536 PVDVATYNVLLDAFCKAQDV 555



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 35/293 (11%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A+ L+N +        ++ +N +I           A +   QM+ +G  P + T +  +N
Sbjct: 68  AVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWIN 127

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           C C  G++  A    G++ K G  P+ I+  T+++GLCI+G++ KA +F           
Sbjct: 128 CYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDF----------- 176

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
                                    D + + G+  +   +  LI    + G   DAF L 
Sbjct: 177 ------------------------HDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLL 212

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           +EM    + P++  YN++I + C       A  LY +++  GI PDI+TYT LI+G C  
Sbjct: 213 QEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRT 272

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           G   E +++  ++    +  +   F +L   + R  +  +A+ +    + R +
Sbjct: 273 GQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQ 325



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 3/197 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I   C   +I  A+ L  +M  K  V D++ ++ L++ LCK G +  A  + 
Sbjct: 363 DVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELF 422

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             ++   P PN  TYN  I  +C++ ++D  + LF  M   G+ P  +T+NIL++  CK 
Sbjct: 423 STINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKS 482

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             + +A+  L  + + +      D IT   L D   K+G    A  L+  M       D+
Sbjct: 483 KRIREAMNLLSVMQSKN---LAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDV 539

Query: 297 VAYNVLINGFCLNGDIS 313
             YNVL++ FC   D++
Sbjct: 540 ATYNVLLDAFCKAQDVA 556



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 2/125 (1%)

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           NA IL+   G  I DA +L   ++     P V  +N +IG+   + H  +A+ L  +M+ 
Sbjct: 55  NAKILSSFNG--IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVF 112

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
           +G+TP I T +  I  +C  G M  A  V   +   G   ++I    + K      E  K
Sbjct: 113 KGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQK 172

Query: 560 ARDIH 564
           A D H
Sbjct: 173 AMDFH 177


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 212/431 (49%), Gaps = 3/431 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           ++  A  +  KMI+ G  PD +T N L+N LCK+G   +A     +       P   TY 
Sbjct: 145 RVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYT 204

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I G C++ E   A  LF  M   G +PN VT+NIL+ +LCK  L+ +A+     + A 
Sbjct: 205 TIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAK 264

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
              + + D+ T   L+          +A AL N+M   NI  +I  +NVL++  C  G +
Sbjct: 265 ---RISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKV 321

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           S A   F  M + G  PDV+TY++L+     + ++ EA   +  +   G  PD  SY  +
Sbjct: 322 SEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNIL 381

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I+G C    I +A++    M+ + + P+   +N +I G  + G L  A  +   M S G 
Sbjct: 382 IKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGN 441

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             ++FT++ L+    + G +  AF L + M    + PD+  YN+LI A C  G++  A +
Sbjct: 442 LPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARK 501

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           L+ E+  +G+ P++  YT +I   C  G + EA E F  ++  G   D   + ++ + + 
Sbjct: 502 LFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFL 561

Query: 553 RMKESDKARDI 563
           + K+  +A  +
Sbjct: 562 QYKDESRAAQL 572



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 212/408 (51%), Gaps = 3/408 (0%)

Query: 130 LGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCA 189
           +G   G  + L ++M   G  PD+ T + L++    +  ++ A  V  +M ++   P+  
Sbjct: 107 MGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAV 166

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           T+N  I G C+V +  +A+  F     +G +P   T+  +++ LCK   +G+     G  
Sbjct: 167 TFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCK---IGETTAAAGLF 223

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
              ++     +V+T  IL+DS  K+    +AL +++ M  K I  DI  YN LI G C  
Sbjct: 224 KKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNF 283

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
                A A   +M     +P++ T+N L++ +CK+GK+ EA   +  +++ GV PD ++Y
Sbjct: 284 RRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTY 343

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            +++ G  +  +IV+AR+   +M+ K   P+   +N++I GY +   +  A  + + M+ 
Sbjct: 344 SSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIH 403

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G++ +   +N LI    + G + +A  L K M  +G  PD+FTY++L+   C  G++  
Sbjct: 404 QGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGK 463

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           A +L+  M    + PDI  Y  LI   C  GN+K+A ++F+++   GL
Sbjct: 464 AFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGL 511



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 212/431 (49%), Gaps = 3/431 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++  L+ D      +I  LC  GK   A+         G  P V T+  ++N LCKIG+ 
Sbjct: 157 IKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGET 216

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A  + ++M E    PN  TYN  I   C+   +++AL +FS M    I P+  T+N L
Sbjct: 217 TAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSL 276

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LC      +A   L E+ + +      ++ T  +L+D+  K G   +A  ++  M +
Sbjct: 277 IQGLCNFRRWKEASALLNEMTSLN---IMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTE 333

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             ++ D+V Y+ L+ G+ L  +I  A   F  M+ +G  PD  +YN L+   CK  ++DE
Sbjct: 334 MGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDE 393

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   +  +   G+ PD ++Y T+I GLC  G + +A++   +M     +P+   +++++D
Sbjct: 394 AKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLD 453

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G+ + G L  AF +  +M S  +  ++  +N LI A  + G++ DA  L  E+ + G+ P
Sbjct: 454 GFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLP 513

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +V  Y  +I   C  G +  AL+ +  M   G  PD  +Y  +I+G     +   A ++ 
Sbjct: 514 NVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLI 573

Query: 530 AKIQTLGLAID 540
            +++  G   +
Sbjct: 574 GEMRDRGFVAE 584



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 156/309 (50%), Gaps = 1/309 (0%)

Query: 261 VITSTILMDSYFKNGDKFQA-LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +I  T L+ +  K G  + A ++L   M    +  DI   ++LI+ F     +  AF+ F
Sbjct: 94  IIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVF 153

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M+K G  PD +T+NTL+N LCK GK  +A  F+     +G  P   +Y TII GLC  
Sbjct: 154 SKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKI 213

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G+   A      M E    P    +N++ID   +   ++ A  I   M +  +S ++FT+
Sbjct: 214 GETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTY 273

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N+LI          +A +L  EM    I P++FT+N+L+ A C  G +  A  ++  M  
Sbjct: 274 NSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTE 333

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G+ PD++TY+ L+ G+  R  + EA ++F  + T G   D   + IL K Y + K  D+
Sbjct: 334 MGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDE 393

Query: 560 ARDIHQKWL 568
           A+ +  + +
Sbjct: 394 AKQLFNEMI 402



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 135/302 (44%), Gaps = 3/302 (0%)

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC-QMLKRGFL 328
           S F+N D   ALA +N M  +     I+ +  L++     G    A      QM   G  
Sbjct: 70  SSFRNID--DALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLS 127

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           PD+ T + L++C     ++D A   +  + K G+ PD +++ T+I GLC  G   +A EF
Sbjct: 128 PDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEF 187

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
                     P  + +  II+G  + G+ + A  +   M   G   NV T+N LI +  +
Sbjct: 188 FDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCK 247

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
              + +A  +   M    I PD+FTYN LI   CN      A  L +EM    I P+I T
Sbjct: 248 DKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFT 307

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +  L+   C  G + EA+ VF  +  +G+  D + +  L   Y    E  +AR +    +
Sbjct: 308 FNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMI 367

Query: 569 LR 570
            +
Sbjct: 368 TK 369



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 3/210 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+  C   +I  A  L  +MI +G  PD + +N L++ LC++G L +A  + + M    
Sbjct: 381 LIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNG 440

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY+  + G+C+   L KA  LF  M +  ++P+   +NIL+ A+CK G L DA 
Sbjct: 441 NLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDAR 500

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K   E+          +V   T ++++  K G   +AL  + +M       D  +YNV+I
Sbjct: 501 KLFSELFVQG---LLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVII 557

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            GF    D S A     +M  RGF+ +  T
Sbjct: 558 RGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 203/394 (51%), Gaps = 9/394 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC  GK   AL L R+M +    P+ +T+N ++   C  G ++ A  ++REM E  
Sbjct: 47  MLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 102

Query: 184 P-SPNCATYNAFITGYCRVNELDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGD 241
             +PN  TY   I+G+C+V  +D+A+ +F  M   G ++P  V +N L+   C +G L  
Sbjct: 103 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 162

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+ +   ++  + G A + V T  +L+ + F +G   +A  L  +M  K +  D+  YN+
Sbjct: 163 ALLYRDRMV--ERGVAMT-VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 219

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LING C  G++  A   F  M +RG    V+TY +L+  L K+G++ E    +    + G
Sbjct: 220 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRG 279

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD + Y  +I      G+I +A E +  M +K + P+   +N ++ G    G +  A 
Sbjct: 280 IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEAR 339

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + D M   G+  ++ T+N LI   +  G + DA  ++ EM+  G  P + TYN LI   
Sbjct: 340 KLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 399

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           C  G    A  +  EM+  GITPD  TY  LI+G
Sbjct: 400 CKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 433



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 190/387 (49%), Gaps = 7/387 (1%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T N ++  LC  G   +A  ++R+M    P PN  TYN  I G+C    +  AL +   M
Sbjct: 43  TFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREM 98

Query: 215 -ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
               GI PN+ T+  ++   CK G + +AVK   E+L    G+   + +    L+  Y  
Sbjct: 99  RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK--GEVKPEAVMYNALIGGYCD 156

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G    AL   + M ++ +   +  YN+L++   ++G  + A+    +M  +G  PDV T
Sbjct: 157 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 216

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN L+N  CK+G + +A   +  +S+ GV    ++Y ++I  L   G + +  +     +
Sbjct: 217 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 276

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            + + P+  ++N +I+ +   G++  AF I   M    ++ +  T+N L+      G + 
Sbjct: 277 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 336

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L  EM   GI PD+ TYN LI      G +  AL++ +EM+ +G  P ++TY  LI
Sbjct: 337 EARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 396

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAID 540
           +G C  G   +AE +  ++   G+  D
Sbjct: 397 QGLCKNGQGDDAENMVKEMVENGITPD 423



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 149/288 (51%), Gaps = 3/288 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  GK+ TAL  R +M+++G    V T+N LV+ L   G   +A  ++ EM   
Sbjct: 149 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 208

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  TYN  I G+C+   + KAL +F  M+  G+R   VT+  L++AL KKG + + 
Sbjct: 209 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 268

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   E +         D++    L++S+  +G+  +A  +  +M +K I  D V YN L
Sbjct: 269 DKLFDEAVRRG---IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 325

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + G CL G +  A     +M KRG  PD++TYNTL++    +G + +A      +   G 
Sbjct: 326 MRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 385

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            P  ++Y  +IQGLC +G    A   +  M+E  + P+   +  +I+G
Sbjct: 386 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 433



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 150/286 (52%), Gaps = 6/286 (2%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A AL+ DMF+  +      +N+++   C  G  + A     QM +    P+ +TYNT++ 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 80

Query: 340 CLCKQGKLDEASHFYGVL-SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SV 397
             C +G++  A      +  + G+AP+Q +Y T+I G C  G + +A +    ML K  V
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            PE  ++N +I GY   G L  A   RD M+  GV+  V T+N L+ A    G   +A+ 
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L +EM   G+ PDVFTYN+LI   C  G++  AL++++ M RRG+   ++TYT LI    
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            +G ++E +++F +    G+  D + +  L   +      D+A +I
Sbjct: 261 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 306



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 169/347 (48%), Gaps = 9/347 (2%)

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A  LF+ M    +     T NI++  LC  G    A++ L ++          + +T   
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM-------PRPNAVTYNT 77

Query: 267 LMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           ++  +   G    AL +  +M ++  I  +   Y  +I+G+C  G +  A   F +ML +
Sbjct: 78  VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 137

Query: 326 GFL-PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           G + P+ + YN L+   C QGKLD A  +   + + GVA    +Y  ++  L + G   +
Sbjct: 138 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 197

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A E +  M  K + P+   +N++I+G+ + G++  A  I + M   GV + V T+ +LI 
Sbjct: 198 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIY 257

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A ++ G + +   L  E +  GI PD+  YN LI +    G+I  A ++  EM ++ I P
Sbjct: 258 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 317

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           D +TY  L++G C  G + EA ++  ++   G+  D + +  L   Y
Sbjct: 318 DDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGY 364



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 3/216 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  AL +   M ++G    V+T+  L+  L K G +++ D +  E       P+ 
Sbjct: 225 CKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDL 284

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             YNA I  +     +D+A  +   M    I P+ VT+N L+  LC  G + +A K + E
Sbjct: 285 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 344

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +          D++T   L+  Y   GD   AL + N+M  K     ++ YN LI G C 
Sbjct: 345 MTKRG---IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 401

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           NG    A     +M++ G  PD  TY +L+  L  +
Sbjct: 402 NGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 437



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 74/143 (51%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR  +  D   + A+I      G I  A  +  +M +K   PD +T+N L+  LC +G +
Sbjct: 276 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 335

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  +I EM++    P+  TYN  I+GY    ++  AL + + M N G  P  +T+N L
Sbjct: 336 DEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 395

Query: 230 VHALCKKGLLGDAVKFLGEVLAD 252
           +  LCK G   DA   + E++ +
Sbjct: 396 IQGLCKNGQGDDAENMVKEMVEN 418



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 51/90 (56%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I    + G +  AL +R +M+ KG  P +LT+N L+  LCK G  + A+
Sbjct: 350 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 409

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           ++++EM E   +P+ +TY + I G    +E
Sbjct: 410 NMVKEMVENGITPDDSTYISLIEGLTTEDE 439


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 217/438 (49%), Gaps = 6/438 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           +R +   G++         M+  G VPD++    L+   C++G   KA  ++  +     
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+  TYN  I+GYC+  E++ AL +   M+   + P+ VT+N ++ +LC  G L  A++
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L  +L  D      DVIT TIL+++  ++     A+ L ++M  +    D+V YNVL+N
Sbjct: 226 VLDRMLQRD---CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G +  A  +   M   G  P+VIT+N +L  +C  G+  +A      + + G +P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
             +++  +I  LC  G + +A + L  M +    P    +N ++ G+ +   +  A    
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           + M+S G   ++ T+N ++ A  + G + DA  +  ++   G  P + TYN +I      
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G    A++L DEM  + + PD ITY+ L+ G    G + EA + F + + +G+  + + F
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522

Query: 545 RILKKRYRRMKESDKARD 562
             +     + +++D+A D
Sbjct: 523 NSIMLGLCKSRQTDRAID 540



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 199/392 (50%), Gaps = 3/392 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R ++  D   +  ++R LC  GK+  A+ +  +M+Q+   PDV+T+  L+   C+   + 
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A  ++ EM +   +P+  TYN  + G C+   LD+A+   + M ++G +PN +THNI++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
            ++C  G   DA K L ++L       +  V+T  IL++   + G   +A+ +   M Q 
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKG---FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             Q + ++YN L++GFC    +  A  Y  +M+ RG  PD++TYNT+L  LCK GK+++A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                 LS  G +P  I+Y T+I GL   G   KA + L  M  K + P+   ++ ++ G
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             R G +  A          G+  N  TFN+++L   +      A      M+  G  P+
Sbjct: 494 LSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPN 553

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
             +Y +LI      G    AL+L +E+  +G+
Sbjct: 554 ETSYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 195/396 (49%), Gaps = 6/396 (1%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
             +IR  C  GK   A  +   +   G VPDV+T+N +++  CK G++  A  V+  MS 
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS- 199

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
              SP+  TYN  +   C   +L +A+ +   M      P+ +T+ IL+ A C+   +G 
Sbjct: 200 --VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+K L E+    D   T DV+T  +L++   K G   +A+   NDM     Q +++ +N+
Sbjct: 258 AMKLLDEM---RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           ++   C  G    A      ML++GF P V+T+N L+N LC++G L  A      + + G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             P+ +SY  ++ G C    + +A E+L  M+ +   P+   +N ++    + G + +A 
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            I + + S G S  + T+N +I    + G    A  L  EM    + PD  TY+ L+G  
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
              G +  A++ + E  R GI P+ +T+  ++ G C
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 202/414 (48%), Gaps = 6/414 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G+I  AL +  +M      PDV+T+N ++  LC  G L++A  V+  M +  
Sbjct: 178 MISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY   I   CR + +  A+ L   M + G  P+ VT+N+LV+ +CK+G L +A+
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           KFL ++ +        +VIT  I++ S    G    A  L  DM +K     +V +N+LI
Sbjct: 295 KFLNDMPSSG---CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           N  C  G +  A     +M + G  P+ ++YN LL+  CK+ K+D A  +   +   G  
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y T++  LC  G +  A E L  +  K   P    +N +IDG  + G    A  +
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M +  +  +  T+++L+   +R G + +A     E    GI P+  T+N ++   C 
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
                 A+     M+ RG  P+  +YT LI+G    G  KEA E+  ++   GL
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 203/409 (49%), Gaps = 7/409 (1%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           DV ++N+L  ++ + G+LE+    +  M      P+       I G+CR+ +  KA  + 
Sbjct: 102 DVESNNHL-RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             +  +G  P+ +T+N+++   CK G + +A+  L      D    + DV+T   ++ S 
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVL------DRMSVSPDVVTYNTILRSL 214

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
             +G   QA+ + + M Q++   D++ Y +LI   C +  +  A     +M  RG  PDV
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TYN L+N +CK+G+LDEA  F   +  +G  P+ I++  I++ +C  G  + A + L  
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           ML K   P    +N++I+   R G L  A  I + M   G   N  ++N L+    +   
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           +  A    + M+  G +PD+ TYN ++ A C  G +  A+++ +++  +G +P +ITY  
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           +I G    G   +A ++  +++   L  D I +  L     R  + D+A
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 150/287 (52%), Gaps = 5/287 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  ++R +C  G+   A  L   M++KG  P V+T N L+N LC+ G L +A  ++ +M 
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  +YN  + G+C+  ++D+A+     M + G  P+ VT+N ++ ALCK G + 
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431

Query: 241 DAVKFLGEVLADDDGKATSDV-ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           DAV+ L ++      K  S V IT   ++D   K G   +A+ L ++M  K+++ D + Y
Sbjct: 432 DAVEILNQL----SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           + L+ G    G +  A  +F +  + G  P+ +T+N+++  LCK  + D A  F   +  
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
            G  P++ SY  +I+GL   G   +A E L  +  K ++ +     V
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 186/391 (47%), Gaps = 24/391 (6%)

Query: 198 YCRVNELDKALHLFSTMANN---GIRP-NRVTHNILVHALCK---KGLLGDAVKF--LGE 248
           Y R N+LD +     ++++    G R  NR+   +LV A  K    GL G A KF  L  
Sbjct: 24  YKRGNKLDVSCRTSGSISSKIPLGSRKRNRL---VLVSAASKVESSGLNGRAQKFETLSS 80

Query: 249 VLADDDGKATSDVITSTILMDSYFKN---------GDKFQALALWNDMFQKNIQTDIVAY 299
             ++ +G      + S+  ++    N         G+  +      +M       DI+  
Sbjct: 81  GYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPC 140

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
             LI GFC  G    A      +   G +PDVITYN +++  CK G+++ A     VL +
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA---LSVLDR 197

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
             V+PD ++Y TI++ LC  G + +A E L  ML++   P+   + ++I+   R   + +
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  + D M   G + +V T+N L+    + G + +A     +M   G  P+V T+N+++ 
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           + C+ G    A +L  +MLR+G +P ++T+  LI   C +G +  A ++  K+   G   
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           + + +  L   + + K+ D+A +  ++ + R
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 227/458 (49%), Gaps = 42/458 (9%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D      +IR LC+ GKIG AL L  KM+ +G  P+ +T+  L++ LCK+G+   A  
Sbjct: 141 QPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIR 200

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++R M +    PN  TYN  I    +  ++++AL++FS M   GI PN  T+N ++H LC
Sbjct: 201 LLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLC 260

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K                                  S +K+        L N+M    I  
Sbjct: 261 KF---------------------------------SEWKH-----VATLMNEMVDSKIMP 282

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++V +  L++  C  G ++ A      M++RG  PDV+TY  L++  C + ++DEA   +
Sbjct: 283 NVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVF 342

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + + G AP+ ISY T+I G C    I KA      M ++ +VP    +N +I G    
Sbjct: 343 DTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHV 402

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           G L +A ++   M++ G   ++ T+  L+  L +TR   +  A ++ K +    + PD+ 
Sbjct: 403 GRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTR--HLDQAMAMLKAIEGSNLAPDIQ 460

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           +YN++I   C +G +  A  L+  +  +G+ PD+ TYT +I G C +G + EA ++F ++
Sbjct: 461 SYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREM 520

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            T G + D   + ++ + + R  E+  A  + Q+ L R
Sbjct: 521 NTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGR 558



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 152/287 (52%), Gaps = 3/287 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC  G +  A  +   MIQ+G  PDV+T+  L++  C   ++++AD V   M   
Sbjct: 289 TLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRK 348

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +PN  +Y+  I GYC++  +DKA++LF  M    + PN VT+N L+H LC  G L DA
Sbjct: 349 GCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDA 408

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E++A        D++T  IL+D   K     QA+A+   +   N+  DI +YN++
Sbjct: 409 IALFHEMVASGQ---IPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIV 465

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C  G++ +A   F  +  +G  PDV TY  ++N LC QG L EA+  +  ++  G 
Sbjct: 466 IDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGC 525

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           +PD  +Y  I +G   + + + A + L  ML +    +     +I++
Sbjct: 526 SPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVE 572



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 189/392 (48%), Gaps = 3/392 (0%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           +++A      M  M+P P+   +   +T    +      L L   M + GI  +  T  I
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++++ C    +      L ++          D  T T L+      G   +AL L++ M 
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGH---QPDTATFTTLIRGLCVEGKIGEALHLFDKMV 171

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            +  Q + V Y  LI+G C  G+  +A      M+++   P+VITYNT+++CL K  +++
Sbjct: 172 GEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVN 231

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA + +  +   G++P+  +Y +II GLC   +       +  M++  ++P   I+  ++
Sbjct: 232 EALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLV 291

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           D   + G ++ A  + D+M+  GV  +V T+ AL+        + +A  +   M+  G  
Sbjct: 292 DALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCA 351

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P+V +Y+ LI   C +  I  A+ L++EM +R + P+I+TY  LI G C  G +++A  +
Sbjct: 352 PNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIAL 411

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           F ++   G   D + +RIL     + +  D+A
Sbjct: 412 FHEMVASGQIPDLVTYRILLDYLCKTRHLDQA 443



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 62/135 (45%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D + +  VI  +C  G++  A  L   +  KG  PDV T+  ++N LC  G L +A 
Sbjct: 455 LAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEAT 514

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + REM+    SP+  TYN    G+ R NE   A+ L   M   G   +  T  ++V  L
Sbjct: 515 KLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEML 574

Query: 234 CKKGLLGDAVKFLGE 248
              GL     + L E
Sbjct: 575 SDDGLDQSVKQILHE 589


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 221/436 (50%), Gaps = 9/436 (2%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           L+    M + GP       +   +  +I   C  G +  A  L  +M  K   P V   N
Sbjct: 369 LEFFDKMNENGP-----SPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVN 423

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            L+    K+   E+A  +  E      + N  TYN+ ++  C+  ++ +A  L+  M + 
Sbjct: 424 SLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSWLCKEGKMSEATTLWQKMLDK 482

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G+ P +V++N ++   C++G L  A     ++L   D     +VIT +ILMD YFKNGD 
Sbjct: 483 GLAPTKVSYNSMILGHCRQGNLDMAASVFSDML---DCGLKPNVITYSILMDGYFKNGDT 539

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             A  +++ M  +NI      YN+ ING C  G  S A     + +++GF+P  +TYN++
Sbjct: 540 EYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSI 599

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           ++   K+G +  A   Y  + ++GV+P+ I+Y T+I G C + +   A +    M  K +
Sbjct: 600 MDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGL 659

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
             +   +  +IDG+ +  D+  A  +   +L  G+S N   +N+LI       ++  A +
Sbjct: 660 ELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALN 719

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L+K ML +GI  D+ TY  LI      G + LAL LY EM  +GI PDII YT LI G C
Sbjct: 720 LQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLC 779

Query: 518 ARGNMKEAEEVFAKIQ 533
            +G ++ A+++ A+++
Sbjct: 780 GKGQLENAQKILAEME 795



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 218/458 (47%), Gaps = 10/458 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  VI+  C    +  A  L + M  KG VP   T   ++    K G++ +A 
Sbjct: 275 VKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEAL 334

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM       N       + GYC+ ++L  AL  F  M  NG  PNRVT+ +L+   
Sbjct: 335 RLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWC 394

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G +  A     ++          ++  +  +++S  +   K ++    + +F + + 
Sbjct: 395 CKNGNMAKAYDLYTQM-------KNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVA 447

Query: 294 TDIV---AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            DI     YN L++  C  G +S A   + +ML +G  P  ++YN+++   C+QG LD A
Sbjct: 448 CDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMA 507

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
           +  +  +   G+ P+ I+Y  ++ G   +GD   A      M+++++VP    +N+ I+G
Sbjct: 508 ASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKING 567

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             + G  S A  +    +  G      T+N+++    + GS+  A +  +EM   G+ P+
Sbjct: 568 LCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPN 627

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V TY  LI   C   +  LAL++ +EM  +G+  DI  Y  LI G C + +++ A  +F+
Sbjct: 628 VITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFS 687

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           ++   GL+ + + +  L   YR +   + A ++ ++ L
Sbjct: 688 ELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRML 725



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 192/394 (48%), Gaps = 3/394 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  GK+  A  L +KM+ KG  P  +++N ++   C+ G+L+ A  V  +M +    PN
Sbjct: 463 LCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPN 522

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY+  + GY +  + + A ++F  M +  I P+  T+NI ++ LCK G   +A   L 
Sbjct: 523 VITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLK 582

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           + +   +       +T   +MD + K G    AL  + +M +  +  +++ Y  LINGFC
Sbjct: 583 KFV---EKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFC 639

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            N +   A     +M  +G   D+  Y  L++  CK+  ++ AS  +  L   G++P+ +
Sbjct: 640 KNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSV 699

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            Y ++I G     ++  A      ML + +  +   +  +IDG  + G L  A  +   M
Sbjct: 700 IYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEM 759

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
            + G+  ++  +  LI      G + +A  +  EM  D I P+V  YN LI      G++
Sbjct: 760 SAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNL 819

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
             A +L++EML +G+TP+  TY  LI G    GN
Sbjct: 820 QEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGN 853



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 197/394 (50%), Gaps = 4/394 (1%)

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           +G   D   ++ ++   CK  D+E A  ++++M +    P+  T+ + I    +   + +
Sbjct: 273 RGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVE 332

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           AL L   M + G++ N V    LV   CK+  L  A++F  ++   ++   + + +T  +
Sbjct: 333 ALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKM---NENGPSPNRVTYAV 389

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L++   KNG+  +A  L+  M  KNI   +   N LI GF        A   F + +   
Sbjct: 390 LIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACD 449

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            + ++ TYN+LL+ LCK+GK+ EA+  +  +   G+AP ++SY ++I G C  G++  A 
Sbjct: 450 -IANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAA 508

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
                ML+  + P    +++++DGY + GD   AF + D M+   +  + FT+N  I   
Sbjct: 509 SVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGL 568

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G   +A  + K+ +  G  P   TYN ++      G +  AL  Y EM   G++P++
Sbjct: 569 CKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNV 628

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           ITYT LI G C   N   A ++  +++  GL +D
Sbjct: 629 ITYTTLINGFCKNNNTDLALKMRNEMRNKGLELD 662



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 182/388 (46%), Gaps = 4/388 (1%)

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
           DH I          +   YN  +  Y + N+L+ A+  F+ +  + I P     N L+ A
Sbjct: 159 DHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTA 218

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           L K  ++ +A +   +++         D  T  I+M +  K+ ++ +A   + +   + +
Sbjct: 219 LVKNDMIYEAREVYEKMVLKG---VHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGV 275

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           + D  AY+++I  FC N D+  A      M  +G++P   T+ +++    KQG + EA  
Sbjct: 276 KLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALR 335

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               +   GV  + +   T+++G C    +V A EF   M E    P    + V+I+   
Sbjct: 336 LKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCC 395

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           + G+++ A+ +   M +  +   VF  N+LI    +  S  +A  L  E +   I  ++F
Sbjct: 396 KNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIF 454

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TYN L+   C  G +  A  L+ +ML +G+ P  ++Y  +I GHC +GN+  A  VF+ +
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKA 560
              GL  + I + IL   Y +  +++ A
Sbjct: 515 LDCGLKPNVITYSILMDGYFKNGDTEYA 542



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 12/218 (5%)

Query: 88  NALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           N  DL LK        MR+ G     LE D   + A+I   C    I TA WL  +++  
Sbjct: 642 NNTDLALKMR----NEMRNKG-----LELDIAAYGALIDGFCKKQDIETASWLFSELLDG 692

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P+ + +N L++    + ++E A ++ + M     S +  TY   I G  +   L  A
Sbjct: 693 GLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLA 752

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           L L+S M+  GI P+ + + +L++ LC KG L +A K L E+  D     T +V     L
Sbjct: 753 LDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDS---ITPNVPIYNAL 809

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           +  +FK G+  +A  L N+M  K +  +   Y++LING
Sbjct: 810 IAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILING 847



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 138/307 (44%), Gaps = 19/307 (6%)

Query: 228 ILVHALCKKG-LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           +L+H L +    L  A   L   ++ D G   +      IL+D +  +  +F        
Sbjct: 123 VLLHILTRSSETLKQAQNLLNRFISGDSGPMPN------ILVDHFIGSTKRF-------- 168

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
               +  +DI  YN L+N +     ++ A   F ++++   +P +   N LL  L K   
Sbjct: 169 ----DFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDM 224

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           + EA   Y  +   GV  D  +   +++      +  +A++F L    + V  +   +++
Sbjct: 225 IYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSI 284

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +I  + +  D+  A  +   M   G   +  TF ++I A  + G++ +A  LK EM+  G
Sbjct: 285 VIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCG 344

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           +  +V     L+   C    +  AL+ +D+M   G +P+ +TY  LI+  C  GNM +A 
Sbjct: 345 VQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAY 404

Query: 527 EVFAKIQ 533
           +++ +++
Sbjct: 405 DLYTQMK 411



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 4/128 (3%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           + C L+T    +  +I  L   G++  AL L  +M  KG +PD++ +  L+N LC  G L
Sbjct: 729 ISCDLQT----YTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQL 784

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E A  ++ EM     +PN   YNA I G+ +   L +A  L + M + G+ PN  T++IL
Sbjct: 785 ENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDIL 844

Query: 230 VHALCKKG 237
           ++   K G
Sbjct: 845 INGKIKGG 852


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 215/418 (51%), Gaps = 9/418 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+ LC+  +I  A  L  +M + G  P+ +T+  L+  LC+ G++  A  + +EM 
Sbjct: 164 YTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEML 223

Query: 181 E------MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
                  +   P   TY+  I G C+V   D+A  LF  M   G+ P+ ++++ L+H  C
Sbjct: 224 NDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFC 283

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G    +     E++   D     D++T ++L+D+  K G   +A  L   M Q+ I  
Sbjct: 284 CAGKWDQSKHLFDEMV---DQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVP 340

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           +++ YN LI+GFC+ GD++SA   F  M  +G  PD I+Y TL+N  CK  K+ EA + Y
Sbjct: 341 NLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLY 400

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + + G +P+  +Y T+++GL   G +  A++    M    V     I+ + +DG  + 
Sbjct: 401 NEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKN 460

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
             L  A  + + + S+    N+  ++ LI    + G +  A+ L +++  +G+ PDV TY
Sbjct: 461 DCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTY 520

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           N++I   C +G +  A  L+++M   G TPDII Y  L+ G C    ++E  ++  K+
Sbjct: 521 NIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKM 578



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 219/430 (50%), Gaps = 3/430 (0%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L  +M   G  PD+ T + L N LC +  + +A   +  +      PN  TY   I G C
Sbjct: 113 LYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLC 172

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
             + + +A  LF  M   G  PN VT+  L+  LC+ G +  A+K   E+L D      +
Sbjct: 173 MEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVN 232

Query: 260 ---DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
               VIT +I++D   K G + +A  L+ +M  + +  D+++Y+ LI+GFC  G    + 
Sbjct: 233 CKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSK 292

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F +M+ +G  PD++T++ L++ LCK+GK+ EA     V+ + G+ P+ I+Y ++I G 
Sbjct: 293 HLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGF 352

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C+ GD+  ARE  LSM  K + P+   +  +I+GY +   +  A ++ + ML  G S NV
Sbjct: 353 CMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNV 412

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+  L+    + G + DA  L   M   G+  +   Y + +   C    +  A++L++E
Sbjct: 413 TTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNE 472

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           +       +I  Y+ LI G C  G ++ A E+F K+   GL  D + + I+   + ++ +
Sbjct: 473 LKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQ 532

Query: 557 SDKARDIHQK 566
            D A  + +K
Sbjct: 533 VDNANILFEK 542



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 213/426 (50%), Gaps = 9/426 (2%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC   ++  AL     ++++G +P+V+T+  L+  LC    + +A  +   M ++  +PN
Sbjct: 136 LCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPN 195

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNG------IRPNRVTHNILVHALCKKGLLGD 241
             TY   I G C+   ++ AL L   M N+        +P  +T++I++  LCK G   +
Sbjct: 196 AVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDE 255

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A +   E+ A        DVI+ + L+  +   G   Q+  L+++M  + +Q D+V ++V
Sbjct: 256 AKELFEEMKAQG---MIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSV 312

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LI+  C  G ++ A      M++RG +P++ITYN+L++  C  G L+ A   +  +   G
Sbjct: 313 LIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKG 372

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD+ISY T+I G C    + +A      ML+    P    +  ++ G  + G + +A 
Sbjct: 373 LEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAK 432

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +  +M ++GVS+N   +   +    +   +F+A  L  E+       ++  Y+ LI   
Sbjct: 433 KLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGL 492

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C  G +  A +L++++ + G+ PD++TY  +I G C  G +  A  +F K++  G   D 
Sbjct: 493 CKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDI 552

Query: 542 IPFRIL 547
           I +  L
Sbjct: 553 IAYNTL 558



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 213/415 (51%), Gaps = 9/415 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTV------PDVLTHNYLVNELCKIGDLEKADHVI 176
            +I+ LC  G +  AL L ++M+   +       P V+T++ +++ LCK+G  ++A  + 
Sbjct: 201 TLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELF 260

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P+  +Y+  I G+C   + D++ HLF  M + G++P+ VT ++L+  LCK+
Sbjct: 261 EEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKE 320

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A K L EV+         ++IT   L+D +   GD   A  L+  M  K ++ D 
Sbjct: 321 GKVTEAKKLL-EVMIQRG--IVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDE 377

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           ++Y  LING+C    +  A   + +ML+ G  P+V TY TLL  L ++GK+ +A   +GV
Sbjct: 378 ISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGV 437

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   GV+ +   Y   + GLC +  + +A E    +   +       ++ +IDG  + G 
Sbjct: 438 MKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGK 497

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L  A+ + + +   G+  +V T+N +I    + G + +A  L ++M  +G  PD+  YN 
Sbjct: 498 LETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNT 557

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
           L+   C    +   ++L  +M+++ ++P+  + T ++   C     K+  ++  K
Sbjct: 558 LLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPK 612



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 190/385 (49%), Gaps = 11/385 (2%)

Query: 164 CKIGDLE--KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP 221
           CK G++   +A H    M    P P  +++N  + G  ++N   +   L++ M   G+ P
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           +  T +IL + LC    + +A+  +  +L         +V+T T L+          +A 
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRG---YIPNVVTYTTLIKGLCMEHRISEAT 181

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL------PDVITYN 335
            L+  M +     + V Y  LI G C  G+++ A     +ML           P VITY+
Sbjct: 182 RLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYS 241

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            +++ LCK G+ DEA   +  +   G+ PD ISY T+I G C  G   +++     M+++
Sbjct: 242 IIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQ 301

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
            V P+   ++V+ID   + G ++ A  + ++M+  G+  N+ T+N+LI      G +  A
Sbjct: 302 GVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSA 361

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             L   M   G+ PD  +Y  LI   C    +  A+ LY+EML+ G +P++ TY  L+KG
Sbjct: 362 RELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKG 421

Query: 516 HCARGNMKEAEEVFAKIQTLGLAID 540
              +G + +A+++F  ++T G++ +
Sbjct: 422 LFQKGKVGDAKKLFGVMKTYGVSAN 446



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 160/328 (48%), Gaps = 38/328 (11%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I   C  GK   +  L  +M+ +G  PD++T + L++ LCK G + +A  ++
Sbjct: 271 DVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLL 330

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK- 235
             M +    PN  TYN+ I G+C V +L+ A  LF +M + G+ P+ +++  L++  CK 
Sbjct: 331 EVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKT 390

Query: 236 ----------------------------------KGLLGDAVKFLGEVLADDDGKATSDV 261
                                             KG +GDA K  G V+      A S +
Sbjct: 391 WKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFG-VMKTYGVSANSQI 449

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
               I +D   KN   F+A+ L+N++   N + +I  Y+ LI+G C  G + +A+  F +
Sbjct: 450 Y--GIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEK 507

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           + + G  PDV+TYN +++  CK G++D A+  +  + + G  PD I+Y T++ G C    
Sbjct: 508 LSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNK 567

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIID 409
           + +  + L  M++K V P      +++D
Sbjct: 568 LEEVIKLLHKMVQKDVSPNAASCTIVVD 595



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 159/296 (53%), Gaps = 6/296 (2%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           Q  +L+N+M    +  D+   ++L N  C    +S A A    +L+RG++P+V+TY TL+
Sbjct: 109 QLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLI 168

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA----REFLLSMLE 394
             LC + ++ EA+  +  + K G  P+ ++Y T+I+GLC  G++  A    +E L    +
Sbjct: 169 KGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQ 228

Query: 395 KSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
             V  +P +  +++IIDG  + G    A  + + M + G+  +V +++ LI      G  
Sbjct: 229 YGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKW 288

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             +  L  EM+  G+ PD+ T+++LI   C  G +  A +L + M++RGI P++ITY  L
Sbjct: 289 DQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSL 348

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           I G C  G++  A E+F  + + GL  D I +  L   Y +  +  +A +++ + L
Sbjct: 349 IDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEML 404



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 145/296 (48%), Gaps = 6/296 (2%)

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           N    QA   ++ M + +    I ++N L+ G       S  F+ + +M   G  PD+ T
Sbjct: 69  NITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFT 128

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
            + L NCLC   ++ EA      + + G  P+ ++Y T+I+GLC+   I +A    L M 
Sbjct: 129 LSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQ 188

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS----FGVS--SNVFTFNALILAET 447
           +    P    +  +I G  + G+++ A  +   ML+    +GV+    V T++ +I    
Sbjct: 189 KLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLC 248

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G   +A  L +EM   G+ PDV +Y+ LI   C  G    +  L+DEM+ +G+ PD++
Sbjct: 249 KVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMV 308

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           T++ LI   C  G + EA+++   +   G+  + I +  L   +  + + + AR++
Sbjct: 309 TFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREL 364



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 116/264 (43%), Gaps = 38/264 (14%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE D   +  +I   C   K+  A+ L  +M+Q G  P+V T+  L+  L + G +  A 
Sbjct: 373 LEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAK 432

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M     S N   Y  F+ G C+ + L +A+ LF+ + +   + N   ++ L+  L
Sbjct: 433 KLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGL 492

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G L  A +                                      L+  + Q+ +Q
Sbjct: 493 CKAGKLETAWE--------------------------------------LFEKLSQEGLQ 514

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+V YN++I+GFC  G + +A   F +M + G  PD+I YNTLL   C+  KL+E    
Sbjct: 515 PDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKL 574

Query: 354 YGVLSKTGVAPDQISYKTIIQGLC 377
              + +  V+P+  S   ++  LC
Sbjct: 575 LHKMVQKDVSPNAASCTIVVDMLC 598



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 75/149 (50%)

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AF   DLM+       + +FN L+    +       FSL  EM L G+ PD+FT ++L  
Sbjct: 75  AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             CN+  +  AL     +LRRG  P+++TYT LIKG C    + EA  +F ++Q LG   
Sbjct: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWL 568
           + + +  L K   +    + A  +H++ L
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEML 223



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 43/249 (17%)

Query: 342 CKQGKLD--EASHFYGVLSKT-----------------------------------GVAP 364
           CK G +   +A HF+ ++ ++                                   G++P
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D  +   +   LC    + +A   +  +L +  +P    +  +I G      +S A  + 
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG------IFPDVFTYNLLI 478
             M   G + N  T+  LI    + G++  A  L KEML D         P V TY+++I
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C +G    A +L++EM  +G+ PD+I+Y+ LI G C  G   +++ +F ++   G+ 
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304

Query: 539 IDHIPFRIL 547
            D + F +L
Sbjct: 305 PDMVTFSVL 313



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 46/98 (46%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  +I   C  G++  A  L  KM + G  PD++ +N L+   C+   LE+  
Sbjct: 513 LQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVI 572

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
            ++ +M +   SPN A+    +   C+  +  K + L 
Sbjct: 573 KLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 610


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 218/437 (49%), Gaps = 3/437 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC    +  A+ +  KM + G  PD +T N L+N  C  G++++A  +  EM    
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  +Y+  I G C+      AL L   M   G +PN V +  ++ +LCK  L+ DA+
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E++   D     DV+T + ++  +   G   +A  L+N+M  +N+  + V + +L+
Sbjct: 253 DLLSEMV---DRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILV 309

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G +S A   F  M K+G  P+  TYN L++  C   ++DEA     ++   G A
Sbjct: 310 DGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCA 369

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P   SY  +I G C    + +A+  L+ M EK + P+   ++ ++ G  + G    A ++
Sbjct: 370 PVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNL 429

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M S G+  ++ T++ L+    + G + +A  L K M    I PD+  YN+LI     
Sbjct: 430 FKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFI 489

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G + +A +L+ ++   GI P I TYT +IKG    G   EA E+F K++  G   +   
Sbjct: 490 AGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCS 549

Query: 544 FRILKKRYRRMKESDKA 560
           + ++ + + + ++S  A
Sbjct: 550 YNVIIQGFLQNQDSSTA 566



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 234/435 (53%), Gaps = 3/435 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           +  T + L  +M   G   +V + N L+N LC++  +  A  V+ +M ++   P+  T+N
Sbjct: 107 QYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFN 166

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I G C   E+ +A+ LF+ M   G +P+ ++++ +++ LCK G    A++ L ++   
Sbjct: 167 TLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKM--- 223

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
           ++     +++  T ++DS  K+     A+ L ++M  + I  D+V Y+ +++GFC  G +
Sbjct: 224 EEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHL 283

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           + A   F +M+ R  +P+ +T+  L++ LCK+G + EA   +  ++K G  P+  +Y  +
Sbjct: 284 NEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNAL 343

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           + G C++  + +A++ L  M++K   P  H +N++I+GY +   L  A S+   M    +
Sbjct: 344 MDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKEL 403

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           + +  T++ L+    + G   +A +L KEM   G+ PD+ TY+ L+   C  GH+  AL+
Sbjct: 404 TPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALK 463

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           L   M    I PDI+ Y  LI+G    G ++ A+E+F+K+   G+      + I+ K   
Sbjct: 464 LLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLL 523

Query: 553 RMKESDKARDIHQKW 567
           +   SD+A ++ +K 
Sbjct: 524 KEGLSDEAYELFRKM 538



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 209/404 (51%), Gaps = 3/404 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR   + D   +  VI  LC  G    AL L RKM +KG  P+++ +  +++ LCK   +
Sbjct: 189 VRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLV 248

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A  ++ EM +    P+  TY+  + G+C +  L++A  LF+ M    + PN VT  IL
Sbjct: 249 NDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTIL 308

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           V  LCK+G++ +A + + E +      A  +  T   LMD Y  N    +A  + + M  
Sbjct: 309 VDGLCKEGMVSEA-RCVFEAMTKKG--AEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVD 365

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K     + +YN+LING+C    +  A +   +M ++   PD +TY+TL+  LC+ G+  E
Sbjct: 366 KGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQE 425

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A + +  +  +G+ PD ++Y T++ GLC HG + +A + L SM E  + P+  ++N++I+
Sbjct: 426 ALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIE 485

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G    G L  A  +   + + G+   + T+  +I    + G   +A+ L ++M  DG  P
Sbjct: 486 GMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLP 545

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +  +YN++I           A++L DEM+ +  + D  T+  L+
Sbjct: 546 NSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 205/414 (49%), Gaps = 3/414 (0%)

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           I  AL    +M++    P V+     +  + K         +  +M     + N  + N 
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            I   CR+N +  A+ +   M   GI+P+ +T N L++  C +G + +AV    E++   
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
                 DVI+ + +++   K+G+   AL L   M +K  + ++VAY  +I+  C +  ++
Sbjct: 193 H---QPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVN 249

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A     +M+ RG  PDV+TY+T+L+  C  G L+EA+  +  +    V P+ +++  ++
Sbjct: 250 DAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILV 309

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            GLC  G + +AR    +M +K   P  + +N ++DGY     +  A  + D+M+  G +
Sbjct: 310 DGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCA 369

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
             V ++N LI    +   + +A SL  EM    + PD  TY+ L+   C +G    AL L
Sbjct: 370 PVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNL 429

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + EM   G+ PD++TY+ L+ G C  G++ EA ++   +Q   +  D + + IL
Sbjct: 430 FKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNIL 483



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 174/358 (48%), Gaps = 8/358 (2%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D ++ + +D L  M D G     +  D   +  ++   C  G +  A  L  +M+ +  +
Sbjct: 245 DTLVNDAMDLLSEMVDRG-----IPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVM 299

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+ +T   LV+ LCK G + +A  V   M++    PN  TYNA + GYC  N++D+A  +
Sbjct: 300 PNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKV 359

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M + G  P   ++NIL++  CK+  L +A   L E+    + + T D +T + LM  
Sbjct: 360 LDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEM---SEKELTPDTVTYSTLMQG 416

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             + G   +AL L+ +M    +  D++ Y+ L++G C +G +  A      M +    PD
Sbjct: 417 LCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPD 476

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           ++ YN L+  +   GKL+ A   +  L   G+ P   +Y  +I+GL   G   +A E   
Sbjct: 477 IVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFR 536

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
            M +   +P    +NVII G+ +  D S A  + D M+    S++  TF  L+  E+R
Sbjct: 537 KMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESR 594



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 3/287 (1%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           ALA +  M + N +  +V +   +         S+  +   QM   G   +V + N L+N
Sbjct: 76  ALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILIN 135

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           CLC+   +  A    G + K G+ PD I++ T+I G CI G+I +A      M+ +   P
Sbjct: 136 CLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQP 195

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   ++ +I+G  + G+ S A  +   M   G   N+  +  +I +  +   + DA  L 
Sbjct: 196 DVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLL 255

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            EM+  GI PDV TY+ ++   C+LGH++ A  L++EM+ R + P+ +T+T L+ G C  
Sbjct: 256 SEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKE 315

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARDI 563
           G + EA  VF  +   G   +   +  L   Y    +M E+ K  DI
Sbjct: 316 GMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDI 362



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 2/245 (0%)

Query: 305 GFCLNGDIS--SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           GF  N  IS   A A F +ML+    P V+ +   L  + K+ +          +   GV
Sbjct: 64  GFLSNNSISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGV 123

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             +  S   +I  LC    +V A   L  M +  + P+   +N +I+G    G++  A  
Sbjct: 124 THNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVG 183

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M+  G   +V +++ +I    + G+   A  L ++M   G  P++  Y  +I + C
Sbjct: 184 LFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLC 243

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               ++ A+ L  EM+ RGI PD++TY+ ++ G C+ G++ EA  +F ++    +  + +
Sbjct: 244 KDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTV 303

Query: 543 PFRIL 547
            F IL
Sbjct: 304 TFTIL 308


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 234/453 (51%), Gaps = 2/453 (0%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R    ++  LC   +   A+   R+   K   P V++ N +++  CK+G  + A      
Sbjct: 151 RTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCM 210

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M +    P+  +YN  I G      +++AL L + M   G++P+ VT+ I+       GL
Sbjct: 211 MLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGL 270

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           +  A + + ++L D+  K   D++T T+L+  + + G+  +AL L  D+     Q +++ 
Sbjct: 271 MSGAREIIQKMLTDEGLKP--DLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVIL 328

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y+VL++  C  G +  A     +M      PD++TY+ L++ LCKQGK+ +A   Y  + 
Sbjct: 329 YSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMC 388

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
              + P+  ++  I++GLC  G +  AR +  S++  ++ P+  ++N++IDGY + GD+ 
Sbjct: 389 FNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVE 448

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   +    ++ ++ TFN+LI    +   + +A  L + + L G+ P   TY  L+
Sbjct: 449 EAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLM 508

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            A C  G+I+   +L  EM  + I P ++TYT +IKG C +  ++E+ ++   ++  GLA
Sbjct: 509 NAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLA 568

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            D I +  + + + + K+  KA ++    L+ N
Sbjct: 569 PDQITYNTIIQCFCKAKDMRKAFELLDDMLIHN 601



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 216/452 (47%), Gaps = 8/452 (1%)

Query: 102 KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           K + D G     L+ D   +  +I   C  G I  AL LRR ++  G   +V+ ++ L++
Sbjct: 280 KMLTDEG-----LKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLS 334

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP 221
            LCK G +++A  ++ EM      P+  TY+  I G C+  ++ +A+ L+  M  N I P
Sbjct: 335 SLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFP 394

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           N   H+ ++  LC+KG+L DA  +   ++  +      DV    I++D Y K GD  +A+
Sbjct: 395 NSFAHSGILKGLCEKGMLSDARMYFDSLIMSN---LRPDVTLYNIMIDGYVKLGDVEEAV 451

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            L+  +  K I   IV +N LI GFC N  +  A      +   G  P  +TY TL+N  
Sbjct: 452 RLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAY 511

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           C++G +++       ++   + P  ++Y  +I+GLC    + ++ + L  M  K + P+ 
Sbjct: 512 CEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQ 571

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +N II  + +  D+  AF + D ML   +     T+N LI    R G + DA  +   
Sbjct: 572 ITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVS 631

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           +    I      Y  +I A C  G    A++++ +M+ +G    I  Y+ +I   C R  
Sbjct: 632 LQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCL 691

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           + EA+  F  + + G++ D   F ++   + R
Sbjct: 692 INEAKYYFCIMLSDGVSPDQEIFEMMLNAFHR 723



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 221/447 (49%), Gaps = 9/447 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMI-QKGTVPD 152
           ++E L+    M   G     L+ D   +  V +   L G +  A  + +KM+  +G  PD
Sbjct: 236 MEEALELTNDMEKQG-----LQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPD 290

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           ++T+  L+   C++G++E+A  + R++       N   Y+  ++  C+  ++D+AL L  
Sbjct: 291 LVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLY 350

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M  N ++P+ VT++IL+H LCK+G +  A++   E+  +   +   +    + ++    
Sbjct: 351 EMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFN---RIFPNSFAHSGILKGLC 407

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           + G    A   ++ +   N++ D+  YN++I+G+   GD+  A   + ++  +   P ++
Sbjct: 408 EKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIV 467

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           T+N+L+   CK  K+ EA      +   G+ P  ++Y T++   C  G+I K  E LL M
Sbjct: 468 TFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEM 527

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
             K + P    + V+I G  +   L  +  + + M + G++ +  T+N +I    +   +
Sbjct: 528 NLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDM 587

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             AF L  +ML+  + P   TYN+LI   C  G +  A ++   +  R I    + YT +
Sbjct: 588 RKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTM 647

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAI 539
           IK HC +G+ + A +VF ++   G  +
Sbjct: 648 IKAHCVKGDAQRAVKVFHQMVEKGFEV 674



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 218/432 (50%), Gaps = 10/432 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM-SEM 182
           +I  L + G +  AL L   M ++G  PD++T+  +      +G +  A  +I++M ++ 
Sbjct: 226 LIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDE 285

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY   I G+C++  +++AL L   + ++G + N + +++L+ +LCK+G + +A
Sbjct: 286 GLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEA 345

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++ L E+ A++      D++T +IL+    K G   QA+ L+ +M    I  +  A++ +
Sbjct: 346 LQLLYEMEANN---LQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGI 402

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + G C  G +S A  YF  ++     PDV  YN +++   K G ++EA   Y  L    +
Sbjct: 403 LKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAI 462

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  +++ ++I G C +  +V+AR  L S+    + P    +  +++ Y   G+++    
Sbjct: 463 TPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINK--- 519

Query: 423 IRDLMLSFG---VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           + +L+L      +   V T+  +I    +   + ++  L ++M   G+ PD  TYN +I 
Sbjct: 520 LHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQ 579

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C    +  A +L D+ML   + P   TY  LI G C  G++++A+ V   +Q   + +
Sbjct: 580 CFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINL 639

Query: 540 DHIPFRILKKRY 551
             + +  + K +
Sbjct: 640 TKVAYTTMIKAH 651



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 186/367 (50%), Gaps = 9/367 (2%)

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           AL +   M    +RP+  T+N L++ L    ++ D    + +       + TS +I   +
Sbjct: 102 ALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSAR-TSSIIVDGL 160

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
              S F++   F      ND   K     +V++N +++ +C  G    A ++FC MLK G
Sbjct: 161 CGQSRFRDAVLFLR---QND--GKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            LPD  +YN L++ L   G ++EA      + K G+ PD ++YK + +G  + G +  AR
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275

Query: 387 EFLLSML-EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           E +  ML ++ + P+   + V+I G+ + G++  A  +R  +LS G   NV  ++ L+ +
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G + +A  L  EM  + + PD+ TY++LI   C  G +  A+QLY EM    I P+
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPN 395

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
              ++ ++KG C +G + +A   F  +    L  D   + I+   Y ++ + ++A  +++
Sbjct: 396 SFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYK 455

Query: 566 KWLLRNK 572
           +  LR+K
Sbjct: 456 R--LRDK 460



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 164/333 (49%), Gaps = 21/333 (6%)

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G + +RV+  ++ H L +K    D    L ++L ++     S ++   + +    K  + 
Sbjct: 58  GFQHSRVSRFLVSHVLARKRRFKDLRLVLDQMLQEE---VASRMVHDALFVLVKMKEQNL 114

Query: 278 FQALALWNDMFQKNIQTDIV--AYN---------------VLINGFCLNGDISSAFAYFC 320
             ++  +N +      TDI+   YN               ++++G C       A  +  
Sbjct: 115 RPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLR 174

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           Q   + F P V+++NT+++  CK G  D A  F+ ++ K G+ PD  SY  +I GL + G
Sbjct: 175 QNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAG 234

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS-FGVSSNVFTF 439
            + +A E    M ++ + P+   + ++  G+   G +S A  I   ML+  G+  ++ T+
Sbjct: 235 SMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTY 294

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
             LI    + G+I +A  L++++L  G   +V  Y++L+ + C  G +  ALQL  EM  
Sbjct: 295 TVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEA 354

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
             + PD++TY+ LI G C +G +++A +++ ++
Sbjct: 355 NNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEM 387



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/237 (21%), Positives = 92/237 (38%), Gaps = 43/237 (18%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L+E++  L+ MR  G     L  D   +  +I+  C    +  A  L   M+     P  
Sbjct: 552 LEESVQLLEDMRAKG-----LAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTP 606

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+N L++ LC+ GD+E AD V+  + +   +     Y   I  +C   +  +A+ +F  
Sbjct: 607 ATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQ 666

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G   +   ++ +++ LCK+ L+ +A  +   +L+D                     
Sbjct: 667 MVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSD--------------------- 705

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                             +  D   + +++N F   G + S F     M+K G L D
Sbjct: 706 -----------------GVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 219/446 (49%), Gaps = 5/446 (1%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D ++ +   G   C+   D   +  ++  LC  G++G A  L   M  +G +P+  T+N 
Sbjct: 226 DAVEFLNVMGKYNCS--PDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNI 283

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           LV   CK+G L++A +VI  M++    P+  TYN  I G C    +++A  L   M N  
Sbjct: 284 LVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLK 343

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           + P+ V++N L++   +   + +A K L E+    +     + +T  I++  Y K G   
Sbjct: 344 LLPDVVSYNTLINGCLEWSKISEAFKLLEEM---SEKGVKPNAVTHNIMVKWYCKEGKMD 400

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
            A      M +     D V YN LING+C  G++  AF    +M ++    D +T NT+L
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL 460

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             LC++ KL+EA        K G   D++SY T+I G    G++ +A +    M EK ++
Sbjct: 461 RTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEII 520

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P    +N II G  +CG    A S  + +L  G+  +  T+N ++    R G +  AF  
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
             +M+ +   PDVFT N+L+   C  G +  AL+L++  + +G   D +TY  LI   C 
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPF 544
            G + +A  + ++++   L  DH  +
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTY 666



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 205/420 (48%), Gaps = 7/420 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  A  +   M Q   +PDV T+N L+N LC  G +E+A  +  EM  ++  P+ 
Sbjct: 289 CKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDV 348

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            +YN  I G    +++ +A  L   M+  G++PN VTHNI+V   CK+G + DA   + +
Sbjct: 349 VSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITK 408

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +   ++   + D +T   L++ Y K G+  +A    ++M +KN++ D V  N ++   C 
Sbjct: 409 M---EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
              +  A+       KRG+  D ++Y TL+    K G +D A   +  + +  + P  ++
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  II GLC  G   +A   L  +LE  ++P+   +N I+ GY R GD+  AF   + M+
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
                 +VFT N L+      G +  A  L    +  G   D  TYN LI + C  G + 
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLD 645

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A  L  EM  + + PD  TY  +I      G ++EAEE  +K+   G     +P ++L+
Sbjct: 646 DAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG----XLPXQVLQ 701



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 216/469 (46%), Gaps = 13/469 (2%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  +R T P +  L+T    +V         G+   A  + +KM +    P++LT N L+
Sbjct: 125 LSILRLTSPSKALLDTAIGAYVQ-------SGQPHHAFQIFKKMKRLRLRPNLLTCNTLL 177

Query: 161 NELCKIGD---LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
           N L +      +  +     +  ++   PN  T+N  I GYC  N+   A+   + M   
Sbjct: 178 NSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKY 237

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
              P+ VT+N ++ ALCKKG LGDA   L ++ +        +  T  IL+  Y K G  
Sbjct: 238 NCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRG---LLPNRNTYNILVYGYCKMGWL 294

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +A  +   M Q N+  D+  YN+LING C  G I  AF    +M     LPDV++YNTL
Sbjct: 295 KEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTL 354

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +N   +  K+ EA      +S+ GV P+ +++  +++  C  G +  A   +  M E   
Sbjct: 355 INGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF 414

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P+   +N +I+GY + G++  AF   D M    +  +  T N ++    R   + +A+ 
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYK 474

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L       G F D  +Y  LI      G++  AL+L+DEM  + I P  +TY  +I G C
Sbjct: 475 LLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             G  ++A     ++   GL  D   +  +   Y R  + +KA   H K
Sbjct: 535 QCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNK 583



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 126/268 (47%), Gaps = 26/268 (9%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  AL L  +M +K  +P  +T+N ++  LC+ G  E+A   + E+ E    P+  TY
Sbjct: 502 GNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTY 561

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  + GYCR  +++KA    + M  N  +P+  T NIL+  LC +G+L  A+K     ++
Sbjct: 562 NTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVS 621

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
              GKA  D +T   L+ S  K G    A  L ++M +K +  D   YN +I     +G 
Sbjct: 622 K--GKAI-DTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGR 678

Query: 312 ISSAFAYFCQMLKRGFLPD-----------------------VITYNTLLNCLCKQGKLD 348
           I  A  +  +ML++G LP                         + Y+  +  LC +GK  
Sbjct: 679 IREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYK 738

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGL 376
           +A   +G   + G+  D+ +Y  ++ GL
Sbjct: 739 DAMRIFGESKQKGITVDKSTYINLMDGL 766



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 96/232 (41%), Gaps = 18/232 (7%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           ET Y     ++   C  G +  A     KM++    PDV T N L+  LC  G LEKA  
Sbjct: 558 ETTYN---TILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALK 614

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +         + +  TYN  IT  C+   LD A +L S M    + P+  T+N ++ AL 
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G + +A +F+ ++L  + G     V+             D  + +        +   +
Sbjct: 675 DSGRIREAEEFMSKML--EKGXLPXQVLQL-----------DXNETVVT--SETSEESDS 719

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
             VAY+  I   C  G    A   F +  ++G   D  TY  L++ L K+ K
Sbjct: 720 SSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 229/478 (47%), Gaps = 40/478 (8%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  +  D   +  +I  LC   ++  A+ L  +M      P+  T+  L++ LCK G +E
Sbjct: 3   RINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVE 62

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  ++ EM       +   Y+  I+G+C    LD+   LF  M   GI PN V ++ L+
Sbjct: 63  EAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLI 122

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           +  CKKGL  +A   L  +    +     DV T T ++    K+G   +AL L++ M +K
Sbjct: 123 NGFCKKGLWREATAVLHTM---TERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK 179

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             +   V YNVLING C  G I  AF  F  ML++G   +V++YNTL+  LC  GKLDEA
Sbjct: 180 GEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEA 239

Query: 351 SHFYGVLSKTG--VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK------------- 395
              +  L + G  V PD I++ T+IQGLC  G + KA E   +M+E+             
Sbjct: 240 MKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILI 299

Query: 396 ----------------------SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
                                  +VP    ++V+IDG+ +   L+ A  +   M   G+S
Sbjct: 300 GEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLS 359

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
             +F +N L+ +  +  S+  A  L +EM      PD  ++N++I  +   G IH A +L
Sbjct: 360 PTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKEL 419

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            ++M + G+TPD  TY+  I      G M+EA+  F  +   G+  D+  +  L K +
Sbjct: 420 LNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGF 477



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 192/383 (50%), Gaps = 5/383 (1%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  +YN  I G C+   L+KA+ L   M  +   PN  T+ IL+  LCK+G + +A++ 
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           LGE+          DV+  + L+  +   G   +  AL+++M +K I  ++V Y+ LING
Sbjct: 68  LGEM---KRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLING 124

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           FC  G    A A    M +RG  PDV TY  ++  LCK G+  +A   + ++++ G  P 
Sbjct: 125 FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPS 184

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++Y  +I GLC  G I  A +   +MLEK    E   +N +I G    G L  A  +  
Sbjct: 185 TVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFS 244

Query: 426 LMLSFG--VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            +L  G  V  +V TFN +I    + G +  A  +   M+  G F ++FT ++LIG    
Sbjct: 245 SLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIK 304

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G I  A++L+  + + G+ P   TY+ +I G C    +  A+ +F++++  GL+     
Sbjct: 305 SGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFD 364

Query: 544 FRILKKRYRRMKESDKARDIHQK 566
           +  L     +    ++AR + Q+
Sbjct: 365 YNTLMASLCKESSLEQARRLFQE 387



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 178/338 (52%), Gaps = 5/338 (1%)

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           I P+ V++N +++ LCK+  L  AV  L E+   +      +  T  ILMD   K G   
Sbjct: 6   ILPDIVSYNTIINGLCKEKRLEKAVDLLVEM---EGSSCEPNSFTYCILMDGLCKEGRVE 62

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A+ L  +M +K ++ D+V Y+ LI+GFC  G +    A F +ML++G  P+V+ Y+ L+
Sbjct: 63  EAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLI 122

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           N  CK+G   EA+     +++ G+ PD  +Y  +I GLC  G   KA +    M EK   
Sbjct: 123 NGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEE 182

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P    +NV+I+G  + G + +AF I + ML  G    V ++N LI+     G + +A  L
Sbjct: 183 PSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKL 242

Query: 459 KKEMLLDG--IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
              +L DG  + PDV T+N +I   C  G +  A+++YD M+ RG   ++ T   LI  +
Sbjct: 243 FSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEY 302

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
              G + +A E++ ++  LGL      + ++   + +M
Sbjct: 303 IKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKM 340



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 196/398 (49%), Gaps = 11/398 (2%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E    L TM + G     ++ D   +  +I  LC  G+   AL L   M +KG  P  +
Sbjct: 132 REATAVLHTMTERG-----IQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+N L+N LCK G +  A  +   M E        +YN  I G C   +LD+A+ LFS++
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246

Query: 215 ANNG--IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
             +G  + P+ +T N ++  LCK+G L  AV+    ++   +  +  ++ T  IL+  Y 
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMI---ERGSFGNLFTCHILIGEYI 303

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K+G   +A+ LW  + +  +      Y+V+I+GFC    ++ A   F +M   G  P + 
Sbjct: 304 KSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLF 363

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            YNTL+  LCK+  L++A   +  + ++   PD IS+  +I G    GDI  A+E L  M
Sbjct: 364 DYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDM 423

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
            +  + P+ + ++  I+   + G +  A    D M++ G++ +   +++LI        I
Sbjct: 424 QQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEI 483

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG-HIHL 489
            +  +L ++M   G+  D+   N ++   CN   H+H+
Sbjct: 484 EEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHV 521



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 203/443 (45%), Gaps = 41/443 (9%)

Query: 102 KTMRDTGPV-RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           + MR  G + R  LE D   +  +I   C  G +     L  +M++KG  P+V+ ++ L+
Sbjct: 63  EAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLI 122

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           N  CK G   +A  V+  M+E    P+  TY   I G C+     KAL LF  M   G  
Sbjct: 123 NGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEE 182

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P+ VT+N+L++ LCK+G +GDA K    +L  + GK    V  +T++M     NG   +A
Sbjct: 183 PSTVTYNVLINGLCKEGCIGDAFKIFETML--EKGKRLEVVSYNTLIM-GLCNNGKLDEA 239

Query: 281 LALWNDMFQKN--IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG------------ 326
           + L++ + +    ++ D++ +N +I G C  G +  A   +  M++RG            
Sbjct: 240 MKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILI 299

Query: 327 -----------------------FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
                                   +P   TY+ +++  CK   L+ A   +  +  +G++
Sbjct: 300 GEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLS 359

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P    Y T++  LC    + +AR     M E +  P+   +N++IDG  + GD+ +A  +
Sbjct: 360 PTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKEL 419

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   G++ + +T+++ I   ++ G + +A      M+  GI PD   Y+ LI     
Sbjct: 420 LNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGL 479

Query: 484 LGHIHLALQLYDEMLRRGITPDI 506
              I   + L  +M   G+  D+
Sbjct: 480 NDEIEEVINLLRQMADMGVILDL 502



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 141/286 (49%), Gaps = 2/286 (0%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M + NI  DIV+YN +ING C    +  A     +M      P+  TY  L++ LCK+G+
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           ++EA    G + + G+  D + Y T+I G C  G + + +     MLEK + P   +++ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +I+G+ + G    A ++   M   G+  +V+T+  +I    + G    A  L   M   G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             P   TYN+LI   C  G I  A ++++ ML +G   ++++Y  LI G C  G + EA 
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 527 EVFAKIQTLG--LAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           ++F+ +   G  +  D I F  + +   +    DKA +I+   + R
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIER 286


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 225/457 (49%), Gaps = 38/457 (8%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D      +IR LC+ GKIG AL L  KMI +G  P+V+T+  L+N LCK+G+   A 
Sbjct: 133 LQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAI 192

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++R M +    P+   Y + I   C+  ++ +A +LFS M   GI P+  T+  L+H+L
Sbjct: 193 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSL 252

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C           L +++   + K   DV+  + ++D+  K G   +A  + + M  + ++
Sbjct: 253 CNLCEWKHVTTLLNQMI---NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 309

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++V YN L++G CL  ++  A   F  M+  G+ P+VI+YNTL+N  CK  ++D+A++ 
Sbjct: 310 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 369

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  + +  + P+ ++Y T++ GLC  G +  A      M+    +P+   + +++D   +
Sbjct: 370 FEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCK 429

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              L  A +                     L +T  GS  D              PD+  
Sbjct: 430 KSHLDEAMA---------------------LLKTIEGSNMD--------------PDIQI 454

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y ++I   C  G +  A  ++  +  +G+ P++ TYT +I G C RG + EA ++F ++ 
Sbjct: 455 YTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 514

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
             G + D   +  + +   + KE+ +A  + Q+ L R
Sbjct: 515 GNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLAR 551



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 221/467 (47%), Gaps = 12/467 (2%)

Query: 71  WFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCL 130
           +FS+   +   +    FN LD    + L     M    P   T+  D+ R   ++  +  
Sbjct: 29  YFSSLSHNRFHSKSLNFNTLD----DALSSFNRMLHMHPPPSTV--DFNR---LLTSIAK 79

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
             +  T   L  +M   G  PDV T N L+N  C +     A  V+ ++ ++   P+ AT
Sbjct: 80  TKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTAT 139

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           +   I G C   ++  ALHLF  M   G +PN VT+  L++ LCK G    A++ L  + 
Sbjct: 140 FTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM- 198

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             + G    DV+  T ++DS  K+    +A  L++ M  + I  DI  Y  LI+  C   
Sbjct: 199 --EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLC 256

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           +         QM+    +PDV+ ++T+++ LCK+GK+ EA     ++   GV P+ ++Y 
Sbjct: 257 EWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYN 316

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            ++ G C+  ++ +A +   +M+     P    +N +I+GY +   +  A  + + M   
Sbjct: 317 ALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQK 376

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
            +  N  T+N L+      G + DA +L  EM+  G  PD+ TY +L+   C   H+  A
Sbjct: 377 ELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEA 436

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           + L   +    + PDI  YT +I G C  G ++ A ++F+ + + GL
Sbjct: 437 MALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGL 483



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 180/369 (48%), Gaps = 3/369 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   + ++I  LC   ++  A  L  KM+ +G  PD+ T+  L++ LC + + +    
Sbjct: 204 QPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTT 263

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++ +M   +  P+   ++  +   C+  ++ +A  +   M   G+ PN VT+N L+   C
Sbjct: 264 LLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHC 323

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
            +  + +AVK    ++   +G A  +VI+   L++ Y K     +A  L+ +M QK +  
Sbjct: 324 LQSEMDEAVKVFDTMV--HNGYA-PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP 380

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           + V YN L++G C  G +  A A F +M+  G +PD+ TY  LL+ LCK+  LDEA    
Sbjct: 381 NTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALL 440

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +  + + PD   Y  +I G+C  G++  AR+   ++  K + P    + ++I+G  R 
Sbjct: 441 KTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRR 500

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G L  A  +   M   G S +  T+N +     +      A  L +EML  G   DV T 
Sbjct: 501 GLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTT 560

Query: 475 NLLIGASCN 483
            LL+   C+
Sbjct: 561 TLLVEMLCD 569



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 156/309 (50%), Gaps = 4/309 (1%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+ S  K        +L N M    I  D+   N+LIN FC       AF+   ++LK G
Sbjct: 73  LLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLG 132

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PD  T+ TL+  LC +GK+ +A H +  +   G  P+ ++Y T+I GLC  G+   A 
Sbjct: 133 LQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAI 192

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             L SM + +  P+  ++  IID   +   ++ AF++   M+  G+S ++FT+ +LI + 
Sbjct: 193 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSL 252

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
                     +L  +M+   I PDV  ++ ++ A C  G I  A  + D M+ RG+ P++
Sbjct: 253 CNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNV 312

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RD 562
           +TY  L+ GHC +  M EA +VF  +   G A + I +  L   Y +++  DKA     +
Sbjct: 313 VTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEE 372

Query: 563 IHQKWLLRN 571
           + QK L+ N
Sbjct: 373 MCQKELIPN 381



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 5/155 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L E +  LKT+  +      ++ D + +  VI  +C  G++  A  +   +  KG  P+V
Sbjct: 433 LDEAMALLKTIEGSN-----MDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNV 487

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+  ++N LC+ G L++A+ +  EM     SP+  TYN    G  +  E  +A+ L   
Sbjct: 488 RTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQE 547

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
           M   G   +  T  +LV  LC   L     + L E
Sbjct: 548 MLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 582


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 211/440 (47%), Gaps = 15/440 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
            K  ++ L  M+  G     ++ D   +  +I DLC   +I     L R M ++   P+ 
Sbjct: 244 FKAAIELLDHMKSKG-----VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N L+N     G +  A  ++ EM     SPN  T+NA I G+       +AL +F  
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G+ P+ V++ +L+  LCK      A  F   +    +G      IT T ++D   K
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM--KRNGVCVGR-ITYTGMIDGLCK 415

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           NG   +A+ L N+M +  I  DIV Y+ LINGFC  G   +A    C++ + G  P+ I 
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 475

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y+TL+   C+ G L EA   Y  +   G   D  ++  ++  LC  G + +A EF+  M 
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
              ++P    ++ +I+GYG  G+   AFS+ D M   G     FT+ +L+    +GG + 
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A    K +       D   YN L+ A C  G++  A+ L+ EM++R I PD  TYT LI
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655

Query: 514 KGHCARGNM-------KEAE 526
            G C +G         KEAE
Sbjct: 656 SGLCRKGKTVIAILFAKEAE 675



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 208/424 (49%), Gaps = 3/424 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G    + +L +KM + G  P ++T+N +++  CK G  + A  ++  M    
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TYN  I   CR N + K   L   M    I PN VT+N L++    +G +  A 
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 318

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E+L+      + + +T   L+D +   G+  +AL ++  M  K +    V+Y VL+
Sbjct: 319 QLLNEMLSFG---LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 375

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C N +   A  ++ +M + G     ITY  +++ LCK G LDEA      +SK G+ 
Sbjct: 376 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 435

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y  +I G C  G    A+E +  +    + P   I++ +I    R G L  A  I
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M+  G + + FTFN L+ +  + G + +A    + M  DGI P+  +++ LI    N
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 555

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G    A  ++DEM + G  P   TY  L+KG C  G+++EAE+    +  +  A+D + 
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 615

Query: 544 FRIL 547
           +  L
Sbjct: 616 YNTL 619



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 186/401 (46%), Gaps = 12/401 (2%)

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
           +V D+L   YL     + G ++ +  + R M     +P+  T NA +    +  E     
Sbjct: 124 SVYDILIRVYL-----REGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
                M    I P+  T NIL++ LC +G    +   + ++  +  G A + V  +T+L 
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM--EKSGYAPTIVTYNTVL- 235

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
             Y K G    A+ L + M  K +  D+  YN+LI+  C +  I+  +     M KR   
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+ +TYNTL+N    +GK+  AS     +   G++P+ +++  +I G    G+  +A + 
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCG--DLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
              M  K + P    + V++DG  +    DL+  F +R  M   GV     T+  +I   
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR--MKRNGVCVGRITYTGMIDGL 413

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G + +A  L  EM  DGI PD+ TY+ LI   C +G    A ++   + R G++P+ 
Sbjct: 414 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 473

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           I Y+ LI   C  G +KEA  ++  +   G   DH  F +L
Sbjct: 474 IIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 514



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 188/436 (43%), Gaps = 57/436 (13%)

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           + A H+++E+S M    +   + A +T Y   N                   N   ++IL
Sbjct: 89  DPARHILKELSLM-SGKSSFVFGALMTTYRLCNS------------------NPSVYDIL 129

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +    ++G++ D+++     L    G   S V T   ++ S  K+G+     +   +M +
Sbjct: 130 IRVYLREGMIQDSLEIFR--LMGLYGFNPS-VYTCNAILGSVVKSGEDVSVWSFLKEMLK 186

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           + I  D+  +N+LIN  C  G    +     +M K G+ P ++TYNT+L+  CK+G+   
Sbjct: 187 RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 246

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A      +   GV  D  +Y  +I  LC    I K    L  M ++ + P    +N +I+
Sbjct: 247 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 306

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G+   G +  A  + + MLSFG+S N  TFNALI      G+  +A  +   M   G+ P
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366

Query: 470 DVFTYNLL-----------------------------------IGASCNLGHIHLALQLY 494
              +Y +L                                   I   C  G +  A+ L 
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           +EM + GI PDI+TY+ LI G C  G  K A+E+  +I  +GL+ + I +  L     RM
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 486

Query: 555 KESDKARDIHQKWLLR 570
               +A  I++  +L 
Sbjct: 487 GCLKEAIRIYEAMILE 502



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 222/484 (45%), Gaps = 41/484 (8%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++++ LC GG +  A    + +       D + +N L+  +CK G+L KA  +  EM + 
Sbjct: 583  SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFS--TMANNGIRPNRVTHNILVHALCKKGLLG 240
               P+  TY + I+G CR  +   A+ LF+    A   + PN+V +   V  + K G   
Sbjct: 643  SILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK 701

Query: 241  DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
              + F  ++   D+   T D++T+  ++D Y + G   +   L  +M  +N   ++  YN
Sbjct: 702  AGIYFREQM---DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYN 758

Query: 301  VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +L++G+    D+S++F  +  ++  G LPD +T ++L+  +C+   L+            
Sbjct: 759  ILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 818

Query: 361  GVAPDQISYKTIIQGLCIHG------DIVK-----------------------------A 385
            GV  D+ ++  +I   C +G      D+VK                             +
Sbjct: 819  GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878

Query: 386  REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            R  L  M ++ + PE   +  +I+G  R GD+  AF +++ M++  +       +A++ A
Sbjct: 879  RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938

Query: 446  ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
              + G   +A  L + ML   + P + ++  L+   C  G++  AL+L   M   G+  D
Sbjct: 939  LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 998

Query: 506  IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            +++Y  LI G CA+G+M  A E++ +++  G   +   ++ L +     + +    DI  
Sbjct: 999  LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1058

Query: 566  KWLL 569
            K LL
Sbjct: 1059 KDLL 1062


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 235/486 (48%), Gaps = 18/486 (3%)

Query: 85  AVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKM 144
            VF A+ LI           R+ G  R ++  D   +  +I  LC   K+  A+ L  +M
Sbjct: 13  GVFEAMGLI-----------REMG--RKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM 59

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
              G  P+ +T   L++ LCK G +++A  ++  M +     +   Y   I+G+C    L
Sbjct: 60  EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNL 119

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D+   LF  M   GI  N VT++ LVH LC+ G   +A   L    A  +     DV+T 
Sbjct: 120 DRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLN---AMAEHGIHPDVVTY 176

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T L+D   K+G    A+ L N M +K  +   V YNVL++G C  G +  AF     M++
Sbjct: 177 TGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIE 236

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL--SKTGVAPDQISYKTIIQGLCIHGDI 382
           +G   DV+TYNTL+  LC +GK+DEA   +  +  ++  + P+  ++  +I GLC  G +
Sbjct: 237 KGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRL 296

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA +    M++K        +N+++ G  + G +  A  +   +L  G   N FT++ L
Sbjct: 297 TKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSIL 356

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    +   +  A  L  EM   G+ P +F YN L+ + C  G +  A  L+ EM     
Sbjct: 357 IDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANC 416

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            PDII++  +I G    G+ +  +E+  K+  +GL  D + F  L  R  ++ E D+A+ 
Sbjct: 417 EPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKS 476

Query: 563 IHQKWL 568
             ++ +
Sbjct: 477 ALERMV 482



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 200/374 (53%), Gaps = 5/374 (1%)

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  + G CR   + +A+ L   M    + P+ V++N L++ LCK   L +AV  L E+ A
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   + +T T LMD   K+G   +A+ L   M +K    D+V Y  LI+GFC NG+
Sbjct: 62  ---AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGN 118

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +      F +ML +G   +V+TY+ L++ LC+ G+  EA+     +++ G+ PD ++Y  
Sbjct: 119 LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTG 178

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC  G    A + L  M+EK   P    +NV++ G  + G + +AF I  +M+  G
Sbjct: 179 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEML--LDGIFPDVFTYNLLIGASCNLGHIHL 489
             ++V T+N L+      G + +A  L   M    + + P+VFT+N+LIG  C  G +  
Sbjct: 239 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 298

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A++++ +M+++G   +++TY  L+ G    G +KEA E++ ++  LG   +   + IL  
Sbjct: 299 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 358

Query: 550 RYRRMKESDKARDI 563
            + +M+  + A+ +
Sbjct: 359 GFCKMRMLNIAKGL 372



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 217/449 (48%), Gaps = 10/449 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E ++ L+ M+  G      + D   +  +I   C  G +     L  +M+ KG   +V
Sbjct: 84  MDEAMELLEAMKKKG-----FDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANV 138

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T++ LV+ LC++G  ++A+ V+  M+E    P+  TY   I G C+      A+ L + 
Sbjct: 139 VTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNL 198

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G  P+ VT+N+L+  LCK+GL+ DA K L  ++  + GK  +DV+T   LM     
Sbjct: 199 MVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMI--EKGKK-ADVVTYNTLMKGLCD 255

Query: 274 NGDKFQALALWNDMF--QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            G   +AL L+N MF  +  ++ ++  +N+LI G C  G ++ A     +M+K+G   ++
Sbjct: 256 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNL 315

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TYN LL    K GK+ EA   +  +   G  P+  +Y  +I G C    +  A+     
Sbjct: 316 VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE 375

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M    + P    +N ++    + G L  A S+   M +     ++ +FN +I    + G 
Sbjct: 376 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 435

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
                 L+ +M+  G+ PD  T++ LI     LG +  A    + M+  G TPD + Y  
Sbjct: 436 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 495

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           L+KG  ++G+  E   +  ++   G  +D
Sbjct: 496 LLKGLSSKGDTTEIINLLHQMAAKGTVLD 524



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 219/462 (47%), Gaps = 18/462 (3%)

Query: 94  LKENLDRLKTMRDTG----PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
           LKE +  L  M   G     V CT          ++  LC  G++  A+ L   M +KG 
Sbjct: 49  LKEAVGLLLEMEAAGCFPNSVTCT---------TLMDGLCKDGRMDEAMELLEAMKKKGF 99

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
             DV+ +  L++  C  G+L++   +  EM     S N  TY+  + G CR+ +  +A  
Sbjct: 100 DADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANT 159

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           + + MA +GI P+ VT+  L+  LCK G    A+  L   L  + G+  S+V T  +L+ 
Sbjct: 160 VLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN--LMVEKGEEPSNV-TYNVLLS 216

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML--KRGF 327
              K G    A  +   M +K  + D+V YN L+ G C  G +  A   F  M   +   
Sbjct: 217 GLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCL 276

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+V T+N L+  LCK+G+L +A   +  + K G   + ++Y  ++ G    G I +A E
Sbjct: 277 EPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAME 336

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               +L+   VP    ++++IDG+ +   L+ A  +   M + G++  +F +N L+ +  
Sbjct: 337 LWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLC 396

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + GS+  A SL +EM      PD+ ++N +I  +   G      +L  +M+  G+ PD +
Sbjct: 397 KEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDAL 456

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           T++ LI      G + EA+    ++   G   D + +  L K
Sbjct: 457 TFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLK 498



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 60/130 (46%)

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
            N ++    R G +F+A  L +EM    + PD+ +YN LI   C    +  A+ L  EM 
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             G  P+ +T T L+ G C  G M EA E+   ++  G   D + +  L   +      D
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 559 KARDIHQKWL 568
           + +++  + L
Sbjct: 121 RGKELFDEML 130


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 237/475 (49%), Gaps = 11/475 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQ-KGTVPD 152
           LK+ L   + MR+       +  + R +  V+  LC       A  + ++M   K   PD
Sbjct: 23  LKQALACFEKMREF------VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPD 76

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREM-SEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           ++T++ ++N  CK G++++A  ++REM +    +P+  TY + + G CR  ++D+A  + 
Sbjct: 77  LVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMV 136

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M   G+ P++ T + L+   C    + +A+K   E+L     K   DV+T T L+D +
Sbjct: 137 REMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK--PDVVTYTALIDGF 194

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K+G+  +A+ +   M  +    ++V Y+ L++G C  GD+  A   F +M  +G +P+V
Sbjct: 195 CKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNV 254

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TY TL++ LC   K+D A      ++ T   PD +SY  ++ G C  G I +A++    
Sbjct: 255 VTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKE 314

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNA-FSIRDLMLSFGVSSNVFTFNALILAETRGG 450
           M  KS +P+   +  ++ G+     L  A F + ++  + G+  +V T++ ++   +R  
Sbjct: 315 MATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAK 374

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
              +A    +EM+   + P+  TY+ LI   C  G +  A+++   M+ + + P + T+ 
Sbjct: 375 RFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFN 434

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            +I   C  G+M EA ++   +   GL    + +  L + + R    + A ++ +
Sbjct: 435 SVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFE 489



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 196/394 (49%), Gaps = 8/394 (2%)

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
           M   P   T+   I G+C+ N+L +AL  F  M    + PN  T+N++V+ LCK  L   
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSK 59

Query: 242 AVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKN-IQTDIVAY 299
           A + L E+    DGK+ + D++T + +++ + K G+  +A  +  +M  ++ I  D+V Y
Sbjct: 60  AYEVLKEM---RDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTY 116

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG-VLS 358
             +++G C +G +  A     +M  +G  PD  T++ L+   C   K+DEA   Y  +L+
Sbjct: 117 TSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILT 176

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
            +   PD ++Y  +I G C  G++ KA + L  M  +  VP    ++ ++ G  + GDL 
Sbjct: 177 SSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD 236

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   M S G   NV T+  LI        +  A  L  EM      PD  +YN L+
Sbjct: 237 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALL 296

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT-LGL 537
              C LG I  A QL+ EM  +   PD ITYT L++G C    ++EA  +   ++T  G+
Sbjct: 297 DGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGI 356

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             D + + I+   Y R K   +A +  Q+ + RN
Sbjct: 357 DPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN 390



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 244/519 (47%), Gaps = 60/519 (11%)

Query: 64  CRSKTRHWFSNKDSDNEGNPQAVFNAL--DLILKENLDRLKTMRDTGPVRCTLETDYRRH 121
           C  K R + +     NE     V N L    +  +  + LK MRD   V   L T    +
Sbjct: 29  CFEKMREFVA----PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVT----Y 80

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
             VI   C  G++  A  + R+M+ + G  PDV+T+  +V+ LC+ G +++A  ++REM 
Sbjct: 81  STVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMK 140

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLF-STMANNGIRPNRVTHNILVHALCKKGLL 239
                P+  T++A ITG+C   ++D+AL L+   + ++  +P+ VT+  L+   CK G L
Sbjct: 141 LKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNL 200

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK----NIQT- 294
             A+K LG +   +  K   +V+T + L+    K GD  QAL L+  M  K    N+ T 
Sbjct: 201 EKAMKMLGVM---EGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTY 257

Query: 295 ------------------------------DIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
                                         D V+YN L++G+C  G I  A   F +M  
Sbjct: 258 TTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMAT 317

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFY-GVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           +  LPD ITY  L+   C   +L+EA      + +  G+ PD ++Y  ++ G       V
Sbjct: 318 KSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFV 377

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A EF+  M+ ++V P    ++ +IDG  + G + +A  +   M++  V  +V TFN++I
Sbjct: 378 EAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVI 437

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM------ 497
            A  R G + +A+ L   M   G+ P + TY  L+      G + +A +L++ M      
Sbjct: 438 GALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKK 497

Query: 498 --LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
                 + P+   ++ LI+G C    + +A  V  ++++
Sbjct: 498 SSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRS 535



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 152/342 (44%), Gaps = 44/342 (12%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + +++  LC  G +  AL L R+M  KG VP+V+T+  L++ LC    ++ A  ++ EM+
Sbjct: 222 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT 281

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  +YNA + GYCR+  +++A  LF  MA     P+R+T+  LV   C    L 
Sbjct: 282 ATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLE 341

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +FL E +    G    DV+T +I++  Y +     +A     +M  +N+  + V Y+
Sbjct: 342 EA-RFLLENMKTAAG-IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYS 399

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G C  G +  A      M+ +   P V T+N+++  LC+ G +DEA      ++  
Sbjct: 400 SLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAH 459

Query: 361 GVAPDQISYKTI------------------------------------------IQGLCI 378
           G+ P  ++Y T+                                          I+GLC 
Sbjct: 460 GLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCK 519

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
             +I KA   +  +  +   P       I+DG  R G    A
Sbjct: 520 AREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEA 561



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 11/250 (4%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKM-IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
           +  ++R  C   ++  A +L   M    G  PDV+T++ +V    +     +A   I+EM
Sbjct: 327 YTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEM 386

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
                +PN  TY++ I G C+   +D A+ +   M N  + P+  T N ++ ALC+ G +
Sbjct: 387 IARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDM 446

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM----FQKNIQTD 295
            +A K L  + A         ++T T L++ + + G    A  L+  M     + +   +
Sbjct: 447 DEAWKLLVAMAAHG---LEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAAN 503

Query: 296 IV---AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           +V   A++ LI G C   +I  A A   ++  R   P       +++ L + G+ +EA  
Sbjct: 504 LVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGK 563

Query: 353 FYGVLSKTGV 362
               +SK G+
Sbjct: 564 LINSISKVGL 573


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 211/440 (47%), Gaps = 15/440 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
            K  ++ L  M+  G     ++ D   +  +I DLC   +I     L R M ++   P+ 
Sbjct: 284 FKAAIELLDHMKSKG-----VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N L+N     G +  A  ++ EM     SPN  T+NA I G+       +AL +F  
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G+ P+ V++ +L+  LCK      A  F   +    +G      IT T ++D   K
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM--KRNGVCVGR-ITYTGMIDGLCK 455

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           NG   +A+ L N+M +  I  DIV Y+ LINGFC  G   +A    C++ + G  P+ I 
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 515

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y+TL+   C+ G L EA   Y  +   G   D  ++  ++  LC  G + +A EF+  M 
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
              ++P    ++ +I+GYG  G+   AFS+ D M   G     FT+ +L+    +GG + 
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A    K +       D   YN L+ A C  G++  A+ L+ EM++R I PD  TYT LI
Sbjct: 636 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695

Query: 514 KGHCARGNM-------KEAE 526
            G C +G         KEAE
Sbjct: 696 SGLCRKGKTVIAILFAKEAE 715



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 208/424 (49%), Gaps = 3/424 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G    + +L +KM + G  P ++T+N +++  CK G  + A  ++  M    
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 298

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TYN  I   CR N + K   L   M    I PN VT+N L++    +G +  A 
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 358

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E+L+      + + +T   L+D +   G+  +AL ++  M  K +    V+Y VL+
Sbjct: 359 QLLNEMLSFG---LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 415

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C N +   A  ++ +M + G     ITY  +++ LCK G LDEA      +SK G+ 
Sbjct: 416 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 475

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y  +I G C  G    A+E +  +    + P   I++ +I    R G L  A  I
Sbjct: 476 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 535

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M+  G + + FTFN L+ +  + G + +A    + M  DGI P+  +++ LI    N
Sbjct: 536 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 595

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G    A  ++DEM + G  P   TY  L+KG C  G+++EAE+    +  +  A+D + 
Sbjct: 596 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 655

Query: 544 FRIL 547
           +  L
Sbjct: 656 YNTL 659



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 186/401 (46%), Gaps = 12/401 (2%)

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
           +V D+L   YL     + G ++ +  + R M     +P+  T NA +    +  E     
Sbjct: 164 SVYDILIRVYL-----REGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 218

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
                M    I P+  T NIL++ LC +G    +   + ++  +  G A + V  +T+L 
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM--EKSGYAPTIVTYNTVL- 275

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
             Y K G    A+ L + M  K +  D+  YN+LI+  C +  I+  +     M KR   
Sbjct: 276 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 335

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+ +TYNTL+N    +GK+  AS     +   G++P+ +++  +I G    G+  +A + 
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCG--DLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
              M  K + P    + V++DG  +    DL+  F +R  M   GV     T+  +I   
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR--MKRNGVCVGRITYTGMIDGL 453

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G + +A  L  EM  DGI PD+ TY+ LI   C +G    A ++   + R G++P+ 
Sbjct: 454 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 513

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           I Y+ LI   C  G +KEA  ++  +   G   DH  F +L
Sbjct: 514 IIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 554



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 188/436 (43%), Gaps = 57/436 (13%)

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           + A H+++E+S M    +   + A +T Y   N                   N   ++IL
Sbjct: 129 DPARHILKELSLM-SGKSSFVFGALMTTYRLCNS------------------NPSVYDIL 169

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +    ++G++ D+++     L    G   S V T   ++ S  K+G+     +   +M +
Sbjct: 170 IRVYLREGMIQDSLEIFR--LMGLYGFNPS-VYTCNAILGSVVKSGEDVSVWSFLKEMLK 226

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           + I  D+  +N+LIN  C  G    +     +M K G+ P ++TYNT+L+  CK+G+   
Sbjct: 227 RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 286

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A      +   GV  D  +Y  +I  LC    I K    L  M ++ + P    +N +I+
Sbjct: 287 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 346

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G+   G +  A  + + MLSFG+S N  TFNALI      G+  +A  +   M   G+ P
Sbjct: 347 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406

Query: 470 DVFTYNLL-----------------------------------IGASCNLGHIHLALQLY 494
              +Y +L                                   I   C  G +  A+ L 
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 466

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           +EM + GI PDI+TY+ LI G C  G  K A+E+  +I  +GL+ + I +  L     RM
Sbjct: 467 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 526

Query: 555 KESDKARDIHQKWLLR 570
               +A  I++  +L 
Sbjct: 527 GCLKEAIRIYEAMILE 542



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 222/484 (45%), Gaps = 41/484 (8%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++++ LC GG +  A    + +       D + +N L+  +CK G+L KA  +  EM + 
Sbjct: 623  SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 682

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFS--TMANNGIRPNRVTHNILVHALCKKGLLG 240
               P+  TY + I+G CR  +   A+ LF+    A   + PN+V +   V  + K G   
Sbjct: 683  SILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK 741

Query: 241  DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
              + F  ++   D+   T D++T+  ++D Y + G   +   L  +M  +N   ++  YN
Sbjct: 742  AGIYFREQM---DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYN 798

Query: 301  VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +L++G+    D+S++F  +  ++  G LPD +T ++L+  +C+   L+            
Sbjct: 799  ILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 858

Query: 361  GVAPDQISYKTIIQGLCIHG------DIVK-----------------------------A 385
            GV  D+ ++  +I   C +G      D+VK                             +
Sbjct: 859  GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918

Query: 386  REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            R  L  M ++ + PE   +  +I+G  R GD+  AF +++ M++  +       +A++ A
Sbjct: 919  RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 978

Query: 446  ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
              + G   +A  L + ML   + P + ++  L+   C  G++  AL+L   M   G+  D
Sbjct: 979  LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 1038

Query: 506  IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            +++Y  LI G CA+G+M  A E++ +++  G   +   ++ L +     + +    DI  
Sbjct: 1039 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1098

Query: 566  KWLL 569
            K LL
Sbjct: 1099 KDLL 1102


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 203/394 (51%), Gaps = 9/394 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC  GK   AL L R+M +    P+ +T+N ++   C  G ++ A  ++REM E  
Sbjct: 160 MLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 215

Query: 184 P-SPNCATYNAFITGYCRVNELDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGD 241
             +PN  TY   I+G+C+V  +D+A+ +F  M   G ++P  V +N L+   C +G L  
Sbjct: 216 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 275

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+ +   ++  + G A + V T  +L+ + F +G   +A  L  +M  K +  D+  YN+
Sbjct: 276 ALLYRDRMV--ERGVAMT-VATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNI 332

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LING C  G++  A   F  M +RG    V+TY +L+  L K+G++ E    +    + G
Sbjct: 333 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRG 392

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD + Y  +I      G+I +A E +  M +K + P+   +N ++ G    G +  A 
Sbjct: 393 IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEAR 452

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + D M   G+  ++ T+N LI   +  G + DA  ++ EM+  G  P + TYN LI   
Sbjct: 453 KLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 512

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           C  G    A  +  EM+  GITPD  TY  LI+G
Sbjct: 513 CKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 546



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 189/387 (48%), Gaps = 7/387 (1%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T N ++  LC  G   +A  ++R+M    P PN  TYN  I G+C    +  AL +   M
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREM 211

Query: 215 -ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
               GI PN+ T+  ++   CK G + +AVK   E+L    G+   + +    L+  Y  
Sbjct: 212 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK--GEVKPEAVMYNALIGGYCD 269

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G    AL   + M ++ +   +  YN+L++   ++G  + A+    +M  +G   DV T
Sbjct: 270 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFT 329

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN L+N  CK+G + +A   +  +S+ GV    ++Y ++I  L   G + +  +     +
Sbjct: 330 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 389

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            + + P+  ++N +I+ +   G++  AF I   M    ++ +  T+N L+      G + 
Sbjct: 390 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 449

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L  EM   GI PD+ TYN LI      G +  AL++ +EM+ +G  P ++TY  LI
Sbjct: 450 EARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 509

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAID 540
           +G C  G   +AE +  ++   G+  D
Sbjct: 510 QGLCKNGQGDDAENMVKEMVENGITPD 536



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 148/288 (51%), Gaps = 3/288 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  GK+ TAL  R +M+++G    V T+N LV+ L   G   +A  ++ EM   
Sbjct: 262 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 321

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             + +  TYN  I G+C+   + KAL +F  M+  G+R   VT+  L++AL KKG + + 
Sbjct: 322 GLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 381

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   E +         D++    L++S+  +G+  +A  +  +M +K I  D V YN L
Sbjct: 382 DKLFDEAVRRG---IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 438

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + G CL G +  A     +M KRG  PD++TYNTL++    +G + +A      +   G 
Sbjct: 439 MRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 498

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            P  ++Y  +IQGLC +G    A   +  M+E  + P+   +  +I+G
Sbjct: 499 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 546



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 149/286 (52%), Gaps = 6/286 (2%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A AL+ DMF+  +      +N+++   C  G  + A     QM +    P+ +TYNT++ 
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 193

Query: 340 CLCKQGKLDEASHFYGVL-SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SV 397
             C +G++  A      +  + G+AP+Q +Y T+I G C  G + +A +    ML K  V
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            PE  ++N +I GY   G L  A   RD M+  GV+  V T+N L+ A    G   +A+ 
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L +EM   G+  DVFTYN+LI   C  G++  AL++++ M RRG+   ++TYT LI    
Sbjct: 314 LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 373

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            +G ++E +++F +    G+  D + +  L   +      D+A +I
Sbjct: 374 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 419



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 168/347 (48%), Gaps = 9/347 (2%)

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A  LF+ M    +     T NI++  LC  G    A++ L ++          + +T   
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM-------PRPNAVTYNT 190

Query: 267 LMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           ++  +   G    AL +  +M ++  I  +   Y  +I+G+C  G +  A   F +ML +
Sbjct: 191 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 250

Query: 326 GFL-PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           G + P+ + YN L+   C QGKLD A  +   + + GVA    +Y  ++  L + G   +
Sbjct: 251 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 310

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A E +  M  K +  +   +N++I+G+ + G++  A  I + M   GV + V T+ +LI 
Sbjct: 311 AYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIY 370

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A ++ G + +   L  E +  GI PD+  YN LI +    G+I  A ++  EM ++ I P
Sbjct: 371 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 430

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           D +TY  L++G C  G + EA ++  ++   G+  D + +  L   Y
Sbjct: 431 DDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGY 477



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 3/216 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  AL +   M ++G    V+T+  L+  L K G +++ D +  E       P+ 
Sbjct: 338 CKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDL 397

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             YNA I  +     +D+A  +   M    I P+ VT+N L+  LC  G + +A K + E
Sbjct: 398 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 457

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +          D++T   L+  Y   GD   AL + N+M  K     ++ YN LI G C 
Sbjct: 458 MTKRG---IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 514

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           NG    A     +M++ G  PD  TY +L+  L  +
Sbjct: 515 NGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 550



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 73/141 (51%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR  +  D   + A+I      G I  A  +  +M +K   PD +T+N L+  LC +G +
Sbjct: 389 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 448

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  +I EM++    P+  TYN  I+GY    ++  AL + + M N G  P  +T+N L
Sbjct: 449 DEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 508

Query: 230 VHALCKKGLLGDAVKFLGEVL 250
           +  LCK G   DA   + E++
Sbjct: 509 IQGLCKNGQGDDAENMVKEMV 529



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 51/90 (56%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I    + G +  AL +R +M+ KG  P +LT+N L+  LCK G  + A+
Sbjct: 463 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 522

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           ++++EM E   +P+ +TY + I G    +E
Sbjct: 523 NMVKEMVENGITPDDSTYISLIEGLTTEDE 552


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 243/523 (46%), Gaps = 44/523 (8%)

Query: 87  FNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHV----AVIRDLCLGGKIGTALWLRR 142
           F +L  +++   D  K     G V   L+  +  +V     V++ LC  G +  A+ L R
Sbjct: 109 FGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIR 168

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT------------ 190
           +M +K   PD++++N L+N LCK   L++A  ++ EM      PN  T            
Sbjct: 169 EMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDG 228

Query: 191 -----------------------YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
                                  Y   I+G+C    LD+   LF  M   GI  N VT++
Sbjct: 229 RMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYS 288

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            LVH LC+ G   +A   L    A  +     DV+T T L+D   K+G    A+ L N M
Sbjct: 289 CLVHGLCRLGQWKEANTVLN---AMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 345

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            +K  +   V YNVL++G C  G +  AF     M+++G   DV+TYNTL+  LC +GK+
Sbjct: 346 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 405

Query: 348 DEASHFYGVL--SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           DEA   +  +  ++  + P+  ++  +I GLC  G + KA +    M++K        +N
Sbjct: 406 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 465

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
           +++ G  + G +  A  +   +L  G   N FT++ LI    +   +  A  L  EM   
Sbjct: 466 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 525

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G+ P +F YN L+ + C  G +  A  L+ EM      PDII++  +I G    G+ +  
Sbjct: 526 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 585

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +E+  K+  +GL  D + F  L  R  ++ E D+A+   ++ +
Sbjct: 586 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMV 628



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 217/449 (48%), Gaps = 10/449 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E ++ L+ M+  G      + D   +  +I   C  G +     L  +M+ KG   +V
Sbjct: 230 MDEAMELLEAMKKKG-----FDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANV 284

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T++ LV+ LC++G  ++A+ V+  M+E    P+  TY   I G C+      A+ L + 
Sbjct: 285 VTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNL 344

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G  P+ VT+N+L+  LCK+GL+ DA K L  ++  + GK  +DV+T   LM     
Sbjct: 345 MVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMI--EKGK-KADVVTYNTLMKGLCD 401

Query: 274 NGDKFQALALWNDMF--QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            G   +AL L+N MF  +  ++ ++  +N+LI G C  G ++ A     +M+K+G   ++
Sbjct: 402 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNL 461

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TYN LL    K GK+ EA   +  +   G  P+  +Y  +I G C    +  A+     
Sbjct: 462 VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE 521

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M    + P    +N ++    + G L  A S+   M +     ++ +FN +I    + G 
Sbjct: 522 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 581

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
                 L+ +M+  G+ PD  T++ LI     LG +  A    + M+  G TPD + Y  
Sbjct: 582 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 641

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           L+KG  ++G+  E   +  ++   G  +D
Sbjct: 642 LLKGLSSKGDTTEIINLLHQMAAKGTVLD 670



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 218/462 (47%), Gaps = 18/462 (3%)

Query: 94  LKENLDRLKTMRDTG----PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
           LKE +  L  M   G     V CT   D          LC  G++  A+ L   M +KG 
Sbjct: 195 LKEAVGLLLEMEAAGCFPNSVTCTTLMD---------GLCKDGRMDEAMELLEAMKKKGF 245

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
             DV+ +  L++  C  G+L++   +  EM     S N  TY+  + G CR+ +  +A  
Sbjct: 246 DADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANT 305

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           + + MA +GI P+ VT+  L+  LCK G    A+  L   L  + G+  S+V T  +L+ 
Sbjct: 306 VLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN--LMVEKGEEPSNV-TYNVLLS 362

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML--KRGF 327
              K G    A  +   M +K  + D+V YN L+ G C  G +  A   F  M   +   
Sbjct: 363 GLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCL 422

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+V T+N L+  LCK+G+L +A   +  + K G   + ++Y  ++ G    G I +A E
Sbjct: 423 EPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAME 482

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               +L+   VP    ++++IDG+ +   L+ A  +   M + G++  +F +N L+ +  
Sbjct: 483 LWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLC 542

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + GS+  A SL +EM      PD+ ++N +I  +   G      +L  +M+  G+ PD +
Sbjct: 543 KEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDAL 602

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           T++ LI      G + EA+    ++   G   D + +  L K
Sbjct: 603 TFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLK 644



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 223/475 (46%), Gaps = 36/475 (7%)

Query: 125 IRDLCL--GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +R LC     +   A+ L    +    +P   T N+LV+ L +  +   A  V R M+ +
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  + +A I  +    +      +   +   G   N    NI++  LC+ G + +A
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 243 VKFL--------------------------------GEVLADDDGKATSDVITSTILMDS 270
           +  +                                G +L  +      + +T T LMD 
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K+G   +A+ L   M +K    D+V Y  LI+GFC NG++      F +ML +G   +
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+TY+ L++ LC+ G+  EA+     +++ G+ PD ++Y  +I GLC  G    A + L 
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 343

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M+EK   P    +NV++ G  + G + +AF I  +M+  G  ++V T+N L+      G
Sbjct: 344 LMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKG 403

Query: 451 SIFDAFSLKKEML--LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            + +A  L   M    + + P+VFT+N+LIG  C  G +  A++++ +M+++G   +++T
Sbjct: 404 KVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVT 463

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           Y  L+ G    G +KEA E++ ++  LG   +   + IL   + +M+  + A+ +
Sbjct: 464 YNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGL 518



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 79/177 (44%)

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M    V+P     + +I+ +         F +  L+L  G + NVF  N ++    R G 
Sbjct: 100 MTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGG 159

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           +F+A  L +EM    + PD+ +YN LI   C    +  A+ L  EM   G  P+ +T T 
Sbjct: 160 VFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTT 219

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           L+ G C  G M EA E+   ++  G   D + +  L   +      D+ +++  + L
Sbjct: 220 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEML 276


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 234/464 (50%), Gaps = 6/464 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  L  D   +  +I      G++  A  L  KMI++   PDV+T+N L++ LCK  ++
Sbjct: 149 LRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEM 208

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            K++ V+ +M +    PN  TYN+ I GY       +++ +F  M+++G+ P  V  N  
Sbjct: 209 VKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSF 268

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +HALC+   + +A      ++         ++I+ + L+  Y   G      +L N M  
Sbjct: 269 IHALCRHNRIKEAKDIFDSMVLKG---PKPNIISYSTLLHGYAAEGCFANMNSLVNLMVS 325

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K I  +   +N+LIN +   G +  A   F  M  +G +PD +T+ T+++ LC+ G+LD+
Sbjct: 326 KGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 385

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVI 407
           A H +  +   GV P +  Y+ +IQG C HG++VKA+E +  M+ K  +P P +  ++ I
Sbjct: 386 ALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKD-IPPPGVKYFSSI 444

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I+   + G ++    I DLM+  G   NV TFN+L+      G++ +AF+L   M   GI
Sbjct: 445 INNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 504

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            P+ + Y  L+   C  G I  AL ++ +ML +G+ P  + Y  ++ G         A++
Sbjct: 505 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKK 564

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           +F ++   G  +    + ++     R   +D+A  + +K    N
Sbjct: 565 MFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMN 608



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 217/466 (46%), Gaps = 24/466 (5%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           KE++   K M  +G + C +  +     + I  LC   +I  A  +   M+ KG  P+++
Sbjct: 244 KESVRVFKEMSSSGLIPCVVNCN-----SFIHALCRHNRIKEAKDIFDSMVLKGPKPNII 298

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           +++ L++     G     + ++  M      PN   +N  I  Y R   +DKA+ +F  M
Sbjct: 299 SYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDM 358

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            N G+ P+ VT   ++ +LC+ G L DA+     ++  D G   S+ +    L+     +
Sbjct: 359 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV--DIGVPPSEAVYRC-LIQGCCNH 415

Query: 275 GDKFQALALWNDMFQKNIQTDIVAY-NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           G+  +A  L ++M  K+I    V Y + +IN     G ++        M++ G  P+V+T
Sbjct: 416 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVT 475

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           +N+L+   C  G ++EA      ++  G+ P+   Y T++ G C +G I  A      ML
Sbjct: 476 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 535

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            K V P   ++N+I+ G  +    + A  +   M+  G + ++ T+  ++     GG   
Sbjct: 536 HKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVL-----GGLCR 590

Query: 454 DAFSLKKEMLLDGIFP-----DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
           +  + +  MLL+ +F      D+ T+N++I A   +G    A +L+  +   G+ P + T
Sbjct: 591 NNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHT 650

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAID-----HIPFRILKK 549
           Y  +I       + +EA+ +F  ++  G A D     HI   +LKK
Sbjct: 651 YNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKK 696



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 172/389 (44%), Gaps = 39/389 (10%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           +P   TYN  I  Y R++  + AL +F  +   G+ P+  ++N L+    K+G +  A +
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              +++   +   + DV+T   L+D   K  +  ++  +   M    I+ +   YN LI 
Sbjct: 179 LFYKMI---EQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIY 235

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G+   G    +   F +M   G +P V+  N+ ++ LC+  ++ EA   +  +   G  P
Sbjct: 236 GYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKP 295

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           + ISY T++ G    G        +  M+ K +VP    +N++I+ Y RCG +  A  I 
Sbjct: 296 NIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIF 355

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           + M + G+  +  TF  +I +  R G + DA      M+  G+ P    Y  LI   CN 
Sbjct: 356 EDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNH 415

Query: 485 GHIHLALQLYDEMLRRGIT------------------------------------PDIIT 508
           G +  A +L  EM+ + I                                     P+++T
Sbjct: 416 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVT 475

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           +  L++G+C  GNM+EA  +   + ++G+
Sbjct: 476 FNSLMEGYCLVGNMEEAFALLDAMASIGI 504



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 145/293 (49%), Gaps = 3/293 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I +L   G++     +   M+Q G  P+V+T N L+   C +G++E+A  ++  M+ +
Sbjct: 443 SIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 502

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PNC  Y   + GYC+   +D AL +F  M + G++P  V +NI++H L +      A
Sbjct: 503 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAA 562

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   E++   +   T  + T  +++    +N    +A  L   +F  N++ DI+ +N++
Sbjct: 563 KKMFHEMI---ESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV 619

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+     G    A   F  +   G +P V TYN +++ L K+   +EA + +  + K+G 
Sbjct: 620 ISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGR 679

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
           APD      I++ L    ++ KA  +L  + E ++  E    +++   + R G
Sbjct: 680 APDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREG 732



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 120/237 (50%)

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P + TYN L++C  +  + + A   +G L +TG+ PD  SY T+I G    G++ KA E 
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              M+E+SV P+   +N +IDG  +  ++  +  + + M+  G+  N  T+N+LI   + 
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G   ++  + KEM   G+ P V   N  I A C    I  A  ++D M+ +G  P+II+
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           Y+ L+ G+ A G       +   + + G+  +H  F IL   Y R    DKA  I +
Sbjct: 300 YSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFE 356


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 199/397 (50%), Gaps = 3/397 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL L  +++  G  PDV  +  +V  LC++ D  +A  VI  M       + ATYN FI 
Sbjct: 199 ALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIR 258

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C+   + +A+ + + ++  G+R +  T+  LV  LCK        + + E++  + G 
Sbjct: 259 GLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMI--EFGF 316

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
             S+   S  L+D   K G+   A  L N + +  +   +  YN LIN  C +G +  A 
Sbjct: 317 VPSEAAVSN-LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAE 375

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           + F  M  +G  P+ +TY+ L++  CK+GKLD A HF G +++ G+      Y ++I G 
Sbjct: 376 SLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGH 435

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G +  A+     M+   + P   I+  +I GY + G+L NAF +   M   G+S N 
Sbjct: 436 CKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNT 495

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           +TF ALI        + +A  L  EM+   + P+  TYN+LI   C  G+   A +L DE
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE 555

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           M+ +G+ PD  TY  LI G C+ G + EA E    +Q
Sbjct: 556 MVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 240/468 (51%), Gaps = 18/468 (3%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  ++  LC   +      +  +MI+ G VP     + LV+ L K G++  A 
Sbjct: 281 LRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAF 340

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ ++ +   +P+   YNA I   C+  +LD+A  LF+ M + G+ PN VT++IL+ + 
Sbjct: 341 DLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSF 400

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G L  A+ FLG+ + +   KAT  V   + L+  + K G    A +L+++M    ++
Sbjct: 401 CKRGKLDVALHFLGK-MTEVGIKAT--VYPYSSLISGHCKLGKLRAAKSLFDEMIANGLK 457

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++V Y  LI+G+C  G++ +AF  + +M  +G  P+  T+  L++ LC   ++ EA+  
Sbjct: 458 PNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +G + +  V P++++Y  +I+G C  G+ V+A E L  M+EK +VP+ + +  +I G   
Sbjct: 518 FGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCS 577

Query: 414 CGDLSNAFSIRDLMLSF-----------GVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            G +S A   R+ M              G   NV T+ ALI    + G +  A  L +EM
Sbjct: 578 TGRVSEA---REFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREM 634

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           L     P+  TY   +    + G+I  A+QL+D +L  G   + +TY  LI+G C  G +
Sbjct: 635 LASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRI 693

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +EA EV   +   G++ D I +  +   Y R  +  +A  + +  L R
Sbjct: 694 QEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNR 741



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 200/415 (48%), Gaps = 12/415 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  GK+  AL    KM + G    V  ++ L++  CK+G L  A  +  EM    
Sbjct: 396 LIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG 455

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN   Y + I+GYC+  EL  A  L+  M   GI PN  T   L+  LC    + +A 
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEAN 515

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K  GE++   +     + +T  +L++ + K G+  +A  L ++M +K +  D   Y  LI
Sbjct: 516 KLFGEMV---EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLI 572

Query: 304 NGFCLNGDISSAFAYFCQMLKR--------GFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           +G C  G +S A  +   +           G LP+V+TY  L+N LCK G +D+A     
Sbjct: 573 SGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCR 632

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +  +   P+Q +Y   +  L   G+I KA + L  +L +  +     +N++I G+ + G
Sbjct: 633 EMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGFCKLG 691

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            +  A  +   M+  G+S +  +++ +I    R G + +A  L + ML  G+ PD   YN
Sbjct: 692 RIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYN 751

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
            LI   C  G +  A +L D+M+RRG+ P+  TY  LI G C   ++    + F+
Sbjct: 752 FLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFS 806



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 160/328 (48%), Gaps = 6/328 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I   C  G++  A  L  +M  KG  P+  T   L++ LC    + +A+ +  EM 
Sbjct: 463 YTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV 522

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TYN  I G+C+     +A  L   M   G+ P+  T+  L+  LC  G + 
Sbjct: 523 EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVS 582

Query: 241 DAVKFLGEVLADDDG-----KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
           +A +F+ ++  +            +V+T T L++   K G   +A  L  +M   N   +
Sbjct: 583 EAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 642

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
              Y   ++     G+I  A      +L  GFL + +TYN L+   CK G++ EA+    
Sbjct: 643 QNTYACFLDYLTSEGNIEKAIQLH-DVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLV 701

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +  +G++PD ISY TII   C  GD+ +A +   SML + V P+   +N +I G    G
Sbjct: 702 NMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTG 761

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +L+ AF +RD M+  GV  N  T+N+LI
Sbjct: 762 ELTKAFELRDDMMRRGVKPNRATYNSLI 789



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 144/296 (48%), Gaps = 12/296 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC   ++  A  L  +M++   +P+ +T+N L+   CK G+  +A  ++ EM E 
Sbjct: 500 ALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEK 559

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANN--------GIRPNRVTHNILVHALC 234
              P+  TY   I+G C    + +A    + +           G  PN VT+  L++ LC
Sbjct: 560 GLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLC 619

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K GL+  A     E+LA +   +  +  T    +D     G+  +A+ L +D+  +    
Sbjct: 620 KIGLMDKAELLCREMLASN---SLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLA 675

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           + V YN+LI GFC  G I  A      M+  G  PD I+Y+T++   C++G L EA   +
Sbjct: 676 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLW 735

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
             +   GV PD ++Y  +I G C+ G++ KA E    M+ + V P    +N +I G
Sbjct: 736 ESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 142/287 (49%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           AL L++++    ++ D+  Y  ++   C   D   A     +M   G    V TYN  + 
Sbjct: 199 ALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIR 258

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LCK  ++ EA     +LS  G+  D  +Y T++ GLC   +     E +  M+E   VP
Sbjct: 259 GLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVP 318

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
                + ++DG  + G++ +AF + + +  FGV+ ++F +NALI +  + G + +A SL 
Sbjct: 319 SEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLF 378

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
             M   G+FP+  TY++LI + C  G + +AL    +M   GI   +  Y+ LI GHC  
Sbjct: 379 NNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKL 438

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           G ++ A+ +F ++   GL  + + +  L   Y +  E   A  ++ +
Sbjct: 439 GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHE 485



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 130/303 (42%)

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           +L+ +Y +N  +   L +   M    I   I   + ++NG         A   F +++  
Sbjct: 150 LLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSS 209

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  PDV  Y  ++  LC+      A    G +  +G      +Y   I+GLC +  + +A
Sbjct: 210 GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEA 269

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E    +  K +  +   +  ++ G  +  +      + + M+ FG   +    + L+  
Sbjct: 270 VEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G+I  AF L  ++   G+ P +F YN LI + C  G +  A  L++ M  +G+ P+
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN 389

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            +TY+ LI   C RG +  A     K+  +G+     P+  L   + ++ +   A+ +  
Sbjct: 390 DVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFD 449

Query: 566 KWL 568
           + +
Sbjct: 450 EMI 452



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 125/292 (42%), Gaps = 63/292 (21%)

Query: 80  EGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALW 139
           EGN    F  LD ++++ L     + DT   R            +I  LC  G++  A  
Sbjct: 543 EGNTVRAFELLDEMVEKGL-----VPDTYTYR-----------PLISGLCSTGRVSEARE 586

Query: 140 L-------RRKMIQ-KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
                   ++K+ + +G +P+V+T+  L+N LCKIG ++KA+ + REM      PN  TY
Sbjct: 587 FMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTY 646

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
             F+        ++KA+ L   +   G   N VT+NIL+   CK G + +A + L  ++ 
Sbjct: 647 ACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMI- 704

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI-------- 303
             D   + D I+ + ++  Y + GD  +A+ LW  M  + +  D VAYN LI        
Sbjct: 705 --DSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGE 762

Query: 304 ---------------------------NGFCLNGDISSAFAYFCQMLKRGFL 328
                                      +G CL   +SS   YF   L   FL
Sbjct: 763 LTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFSCKLNWCFL 814


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 209/442 (47%), Gaps = 7/442 (1%)

Query: 114 LETDYR----RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           LE+D+R     +   I+       +G  L L  +M      P V  +N L++ LCK   +
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A+ +  EM   R  P+  TYN  I GYC+    +K+  +   M  + I P+ +T N L
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  L K G++ DA   L E+    D     D  T +IL D Y  N     AL ++     
Sbjct: 291 LKGLFKAGMVEDAENVLKEM---KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             ++ +    ++L+N  C  G I  A     + + +G +P+ + YNT+++  C++G L  
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A      + K G+ PD ++Y  +I+  C  G++  A + +  M  K V P    +N++I 
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           GYGR  +    F I   M   G   NV ++  LI    +G  + +A  +K++M   G+ P
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            V  YN+LI   C+ G I  A +   EML++GI  +++TY  LI G    G + EAE++ 
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587

Query: 530 AKIQTLGLAIDHIPFRILKKRY 551
            +I   GL  D   +  L   Y
Sbjct: 588 LEISRKGLKPDVFTYNSLISGY 609



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 213/410 (51%), Gaps = 4/410 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G    +  +R +M      P ++T N L+  L K G +E A++V++EM ++
Sbjct: 254 TLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL 313

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  T++    GY    + + AL ++ T  ++G++ N  T +IL++ALCK+G +  A
Sbjct: 314 GFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + LG  +A   G   ++VI +T ++D Y + GD   A      M ++ ++ D +AYN L
Sbjct: 374 EEILGREMAK--GLVPNEVIYNT-MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCL 430

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I  FC  G++ +A     +M  +G  P V TYN L+    ++ + D+       +   G 
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ +SY T+I  LC    +++A+     M ++ V P+  I+N++IDG    G + +AF 
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
               ML  G+  N+ T+N LI   +  G + +A  L  E+   G+ PDVFTYN LI    
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
             G++   + LY+EM R GI P + TY  LI   C +  ++  E +F ++
Sbjct: 611 FAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM 659



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 195/412 (47%), Gaps = 11/412 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G +  A      M ++G  PD L +N L+   C++G++E A+  + +M   
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SP+  TYN  I GY R  E DK   +   M +NG  PN V++  L++ LCK   L +A
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513

Query: 243 VKFLGEVLADD--DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
                +++  D  D   +  V    +L+D     G    A     +M +K I+ ++V YN
Sbjct: 514 -----QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYN 568

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G  + G +S A     ++ ++G  PDV TYN+L++     G +      Y  + ++
Sbjct: 569 TLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS 628

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P   +Y  +I  LC    I         M   S+ P+  ++N ++  Y   GD+  A
Sbjct: 629 GIKPTLKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKA 684

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           F+++  M+   +  +  T+N+LIL + + G + +  SL  EM    + P+  TYN+++  
Sbjct: 685 FNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKG 744

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            C +     A   Y EM  +G   D+    EL+ G       KEAE V +++
Sbjct: 745 HCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 165/360 (45%), Gaps = 3/360 (0%)

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           + +A  LF  + N GI P+  +  +L+  L K       +     +L + D + +  +  
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNIL-ESDFRPSKFMYG 183

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             I   +  K  D  + L L+N M    I   +  YNVLI+G C    ++ A   F +ML
Sbjct: 184 KAI--QAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            R  LP +ITYNTL++  CK G  +++      +    + P  I++ T+++GL   G + 
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A   L  M +   VP+   ++++ DGY        A  + +  +  GV  N +T + L+
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            A  + G I  A  +    +  G+ P+   YN +I   C  G +  A    + M ++G+ 
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMK 421

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PD + Y  LI+  C  G M+ AE+   K++  G++     + IL   Y R  E DK  DI
Sbjct: 422 PDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDI 481



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/306 (21%), Positives = 134/306 (43%)

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T+L+D   K       + ++ ++ + + +     Y   I       D+      F +M  
Sbjct: 148 TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH 207

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
               P V  YN L++ LCK  ++++A   +  +    + P  I+Y T+I G C  G+  K
Sbjct: 208 DRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEK 267

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           + +    M    + P    +N ++ G  + G + +A ++   M   G   + FTF+ L  
Sbjct: 268 SFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFD 327

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
             +       A  + +  +  G+  + +T ++L+ A C  G I  A ++    + +G+ P
Sbjct: 328 GYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP 387

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
           + + Y  +I G+C +G++  A      ++  G+  DH+ +  L +R+  + E + A    
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447

Query: 565 QKWLLR 570
            K  L+
Sbjct: 448 NKMKLK 453



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 19/267 (7%)

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL-DEASHFYGVLSKTGVAP 364
           F    ++ SAF+     LK  F     +Y  LL+ L  + K+  EA+  +  L   G+ P
Sbjct: 89  FASPKELFSAFSLSSPSLKHDF-----SY-LLLSVLLNESKMISEAADLFFALRNEGIYP 142

Query: 365 DQISYKTIIQGLCIHGDIVKAREF------LLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
              S   ++  L      VK ++F       L++LE    P   ++   I    +  D+ 
Sbjct: 143 SSDSLTLLLDHL------VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVG 196

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
               + + M    +  +VF +N LI    +G  + DA  L  EML   + P + TYN LI
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G+   + ++ + M    I P +IT+  L+KG    G +++AE V  +++ LG  
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQ 565
            D   F IL   Y   ++++ A  +++
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYE 343



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 113/237 (47%), Gaps = 7/237 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E +   +  +I  L + GK+  A  L  ++ +KG  PDV T+N L++     G++++  
Sbjct: 560 IELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCI 619

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM      P   TY+  I+  C    ++    LF  M+   ++P+ + +N ++H  
Sbjct: 620 ALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCY 675

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
              G +  A     +++    G    D  T   L+    K G   +  +L ++M  + ++
Sbjct: 676 AVHGDMEKAFNLQKQMIEKSIG---LDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREME 732

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            +   YN+++ G C   D  SA+ ++ +M ++GFL DV   N L++ L ++ +  EA
Sbjct: 733 PEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 8/157 (5%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           +L+ D   +  V+    + G +  A  L+++MI+K    D  T+N L+    K+G L + 
Sbjct: 660 SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEV 719

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             +I EM+     P   TYN  + G+C V +   A   +  M   G   +    N LV  
Sbjct: 720 RSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSG 779

Query: 233 LCKKGLLGDAV--------KFLGEVLADDDGKATSDV 261
           L ++    +A         + LG+V  D+D  AT  +
Sbjct: 780 LKEEWRSKEAEIVISEMNGRMLGDVTVDEDLSATEKL 816


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 210/422 (49%), Gaps = 3/422 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC  G++G A  L   M  +G +P+  T+N LV   CK+G L++A +VI  M++ 
Sbjct: 248 TILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQN 307

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  I G C    +++A  L   M N  + P+ V++N L++   +   + +A
Sbjct: 308 NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEA 367

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K L E+    +     + +T  I++  Y K G    A      M +     D V YN L
Sbjct: 368 FKLLEEM---SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING+C  G++  AF    +M ++    D +T NT+L  LC++ KL+EA        K G 
Sbjct: 425 INGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D++SY T+I G    G++ +A +    M EK ++P    +N II G  +CG    A S
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
             + +L  G+  +  T+N ++    R G +  AF    +M+ +   PDVFT N+L+   C
Sbjct: 545 KLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC 604

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +  AL+L++  + +G   D +TY  LI   C  G + +A  + ++++   L  DH 
Sbjct: 605 MEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHY 664

Query: 543 PF 544
            +
Sbjct: 665 TY 666



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 201/414 (48%), Gaps = 3/414 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  A  +   M Q   +PDV T+N L+N LC  G +E+A  +  EM  ++  P+ 
Sbjct: 289 CKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDV 348

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            +YN  I G    +++ +A  L   M+  G++PN VTHNI+V   CK+G + DA   + +
Sbjct: 349 VSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITK 408

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +   ++   + D +T   L++ Y K G+  +A    ++M +KN++ D V  N ++   C 
Sbjct: 409 M---EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
              +  A+       KRG+  D ++Y TL+    K G +D A   +  + +  + P  ++
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  II GLC  G   +A   L  +LE  ++P+   +N I+ GY R GD+  AF   + M+
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
                 +VFT N L+      G +  A  L    +  G   D  TYN LI + C  G + 
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLD 645

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            A  L  EM  + + PD  TY  +I      G ++EAEE  +K+   G   D +
Sbjct: 646 DAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV 699



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 215/469 (45%), Gaps = 13/469 (2%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  +R T P +  L+T    +V         G+   A  + +KM +    P++LT N L+
Sbjct: 125 LSILRLTSPSKALLDTAIGAYVQ-------SGQPHHAFQIFKKMKRLRLRPNLLTCNTLL 177

Query: 161 NELCKIGD---LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
           N L +      +  +     +  ++   PN  T+N  I GYC  N+   A+   + M   
Sbjct: 178 NSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKY 237

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
              P+ VT+N ++  LCKKG LGDA   L ++ +        +  T  IL+  Y K G  
Sbjct: 238 NCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRG---LLPNRNTYNILVYGYCKMGWL 294

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +A  +   M Q N+  D+  YN+LING C  G I  AF    +M     LPDV++YNTL
Sbjct: 295 KEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTL 354

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +N   +  K+ EA      +S+ GV P+ +++  +++  C  G +  A   +  M E   
Sbjct: 355 INGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF 414

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P+   +N +I+GY + G++  AF   D M    +  +  T N ++    R   + +A+ 
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYK 474

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L       G F D  +Y  LI      G++  AL+L+DEM  + I P  +TY  +I G C
Sbjct: 475 LLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             G  ++A     ++   GL  D   +  +   Y R  + +KA   H K
Sbjct: 535 QCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNK 583



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 26/268 (9%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  AL L  +M +K  +P  +T+N ++  LC+ G  E+A   + E+ E    P+  TY
Sbjct: 502 GNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTY 561

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  + GYCR  +++KA    + M  N  +P+  T NIL+  LC +G+L  A+K     ++
Sbjct: 562 NTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVS 621

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
              GKA  D +T   L+ S  K G    A  L ++M +K +  D   YN +I     +G 
Sbjct: 622 K--GKAI-DTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGR 678

Query: 312 ISSAFAYFCQMLKRGFLPD-----------------------VITYNTLLNCLCKQGKLD 348
           I  A  +  +ML++G LPD                        + Y+  +  LC +GK  
Sbjct: 679 IREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYK 738

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGL 376
           +A   +G   + G+  D+ +Y  ++ GL
Sbjct: 739 DAMRIFGESKQKGITVDKSTYINLMDGL 766



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 18/232 (7%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           ET Y     ++   C  G +  A     KM++    PDV T N L+  LC  G LEKA  
Sbjct: 558 ETTYN---TILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALK 614

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +         + +  TYN  IT  C+   LD A +L S M    + P+  T+N ++ AL 
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G + +A +F+ ++L  + G     V+             DK + +        +   +
Sbjct: 675 DSGRIREAEEFMSKML--EKGNLPDQVLQL-----------DKNETVVT--SETSEESDS 719

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
             VAY+  I   C  G    A   F +  ++G   D  TY  L++ L K+ K
Sbjct: 720 SSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 211/440 (47%), Gaps = 15/440 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
            K  ++ L  M+  G     ++ D   +  +I DLC   +I     L R M ++   P+ 
Sbjct: 244 FKAAIELLDHMKSKG-----VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N L+N     G +  A  ++ EM     SPN  T+NA I G+       +AL +F  
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G+ P+ V++ +L+  LCK      A  F   +    +G      IT T ++D   K
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM--KRNGVCVGR-ITYTGMIDGLCK 415

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           NG   +A+ L N+M +  I  DIV Y+ LINGFC  G   +A    C++ + G  P+ I 
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 475

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y+TL+   C+ G L EA   Y  +   G   D  ++  ++  LC  G + +A EF+  M 
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
              ++P    ++ +I+GYG  G+   AFS+ D M   G     FT+ +L+    +GG + 
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A    K +       D   YN L+ A C  G++  A+ L+ EM++R I PD  TYT LI
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655

Query: 514 KGHCARGNM-------KEAE 526
            G C +G         KEAE
Sbjct: 656 SGLCRKGKTVIAILFAKEAE 675



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 208/424 (49%), Gaps = 3/424 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G    + +L +KM + G  P ++T+N +++  CK G  + A  ++  M    
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 258

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TYN  I   CR N + K   L   M    I PN VT+N L++    +G +  A 
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 318

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E+L+      + + +T   L+D +   G+  +AL ++  M  K +    V+Y VL+
Sbjct: 319 QLLNEMLSFG---LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 375

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C N +   A  ++ +M + G     ITY  +++ LCK G LDEA      +SK G+ 
Sbjct: 376 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 435

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y  +I G C  G    A+E +  +    + P   I++ +I    R G L  A  I
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 495

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M+  G + + FTFN L+ +  + G + +A    + M  DGI P+  +++ LI    N
Sbjct: 496 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 555

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G    A  ++DEM + G  P   TY  L+KG C  G+++EAE+    +  +  A+D + 
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 615

Query: 544 FRIL 547
           +  L
Sbjct: 616 YNTL 619



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 186/401 (46%), Gaps = 12/401 (2%)

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
           +V D+L   YL     + G ++ +  + R M     +P+  T NA +    +  E     
Sbjct: 124 SVYDILIRVYL-----REGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
                M    I P+  T NIL++ LC +G    +   + ++  +  G A + V  +T+L 
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM--EKSGYAPTIVTYNTVL- 235

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
             Y K G    A+ L + M  K +  D+  YN+LI+  C +  I+  +     M KR   
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+ +TYNTL+N    +GK+  AS     +   G++P+ +++  +I G    G+  +A + 
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCG--DLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
              M  K + P    + V++DG  +    DL+  F +R  M   GV     T+  +I   
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR--MKRNGVCVGRITYTGMIDGL 413

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G + +A  L  EM  DGI PD+ TY+ LI   C +G    A ++   + R G++P+ 
Sbjct: 414 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 473

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           I Y+ LI   C  G +KEA  ++  +   G   DH  F +L
Sbjct: 474 IIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 514



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 188/436 (43%), Gaps = 57/436 (13%)

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           + A H+++E+S M    +   + A +T Y   N                   N   ++IL
Sbjct: 89  DPARHILKELSLM-SGKSSFVFGALMTTYRLCNS------------------NPSVYDIL 129

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +    ++G++ D+++     L    G   S V T   ++ S  K+G+     +   +M +
Sbjct: 130 IRVYLREGMIQDSLEIFR--LMGLYGFNPS-VYTCNAILGSVVKSGEDVSVWSFLKEMLK 186

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           + I  D+  +N+LIN  C  G    +     +M K G+ P ++TYNT+L+  CK+G+   
Sbjct: 187 RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 246

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A      +   GV  D  +Y  +I  LC    I K    L  M ++ + P    +N +I+
Sbjct: 247 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 306

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G+   G +  A  + + MLSFG+S N  TFNALI      G+  +A  +   M   G+ P
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366

Query: 470 DVFTYNLL-----------------------------------IGASCNLGHIHLALQLY 494
              +Y +L                                   I   C  G +  A+ L 
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           +EM + GI PDI+TY+ LI G C  G  K A+E+  +I  +GL+ + I +  L     RM
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 486

Query: 555 KESDKARDIHQKWLLR 570
               +A  I++  +L 
Sbjct: 487 GCLKEAIRIYEAMILE 502



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 222/484 (45%), Gaps = 41/484 (8%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++++ LC GG +  A    + +       D + +N L+  +CK G+L KA  +  EM + 
Sbjct: 583  SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFS--TMANNGIRPNRVTHNILVHALCKKGLLG 240
               P+  TY + I+G CR  +   A+ LF+    A   + PN+V +   V  + K G   
Sbjct: 643  SILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK 701

Query: 241  DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
              + F  ++   D+   T D++T+  ++D Y + G   +   L  +M  +N   ++  YN
Sbjct: 702  AGIYFREQM---DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYN 758

Query: 301  VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +L++G+    D+S++F  +  ++  G LPD +T ++L+  +C+   L+            
Sbjct: 759  ILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 818

Query: 361  GVAPDQISYKTIIQGLCIHG------DIVK-----------------------------A 385
            GV  D+ ++  +I   C +G      D+VK                             +
Sbjct: 819  GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878

Query: 386  REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            R  L  M ++ + PE   +  +I+G  R GD+  AF +++ M++  +       +A++ A
Sbjct: 879  RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938

Query: 446  ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
              + G   +A  L + ML   + P + ++  L+   C  G++  AL+L   M   G+  D
Sbjct: 939  LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 998

Query: 506  IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            +++Y  LI G CA+G+M  A E++ +++  G   +   ++ L +     + +    DI  
Sbjct: 999  LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1058

Query: 566  KWLL 569
            K LL
Sbjct: 1059 KDLL 1062


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 226/447 (50%), Gaps = 4/447 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   +   AL   R M   G V D + +  L++ L K   L++A  ++ EM +  
Sbjct: 50  LIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHG 109

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYN+ I G C+ NE D+A  LF  M +    P+ VT+N L+  L + G L  A+
Sbjct: 110 CEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAM 169

Query: 244 KFLGEVL----ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
               E+L     D D + + +VIT ++L+D   K     QA+ L   M  +    D++ Y
Sbjct: 170 ALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITY 229

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
            +L++G C    +++A+    +ML  G +P+++TYN+LL+ LC+  ++ +A      ++ 
Sbjct: 230 TILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTC 289

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G  P+ ++Y T+I GLC  G +  A   L  M++K   P+  I+N++I+G  +   +  
Sbjct: 290 RGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDE 349

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           + ++    +S G+  +V T++++I    R   + +A  L   +   G  PDV  Y+ LI 
Sbjct: 350 SIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLID 409

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C  G +  A  LY+ M   G   D++TY+ LI G C  G + EA  + A++  +G   
Sbjct: 410 GLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPP 469

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQK 566
             + +  L K    +   D+A ++ ++
Sbjct: 470 STMTYNSLIKGLCDLNHLDEAIELVEE 496



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/435 (29%), Positives = 209/435 (48%), Gaps = 10/435 (2%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           ++  AL +  +M   G  P+V+T+N L++ LCK  + ++A  +   M  +  SP+  TYN
Sbjct: 94  RLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYN 153

Query: 193 AFITGYCRVNELDKALHLFSTM-------ANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
             + G  R  +L++A+ LF  M        ++   PN +T+++L+  LCK   +  AV+ 
Sbjct: 154 TLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVEL 213

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L  + A      + DVIT TIL+D   K      A  +  +M       ++V YN L++G
Sbjct: 214 LESMKAR---GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHG 270

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C    +S A A    M  RG  P+V+TY TL++ LCK G++ +A      +   G  PD
Sbjct: 271 LCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPD 330

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            + Y  +I GLC    + ++   L   +   + P+   ++ +I G  R   L  A  +  
Sbjct: 331 LMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLL 390

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            + S G   +V  ++ LI    + G + +AF L + M  DG   DV TY+ LI   C  G
Sbjct: 391 YVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAG 450

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  A  L   M+R G  P  +TY  LIKG C   ++ EA E+  +++    A   + + 
Sbjct: 451 RVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYN 510

Query: 546 ILKKRYRRMKESDKA 560
           IL     RM+  D A
Sbjct: 511 ILIHGMCRMERVDSA 525



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 235/519 (45%), Gaps = 61/519 (11%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L + L  L  MRD G      E +   + ++I  LC   +   A  L   M      P +
Sbjct: 95  LDQALAILHEMRDHG-----CEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSM 149

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRP-------SPNCATYNAFITGYCRVNELDK 206
           +T+N L++ L + G LE+A  + +EM + R        SPN  TY+  I G C+ N + +
Sbjct: 150 VTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQ 209

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A+ L  +M   G  P+ +T+ ILV  LCK+  +  A + L E+L   D     +++T   
Sbjct: 210 AVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML---DAGCVPNLVTYNS 266

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+    +      ALAL  DM  +    ++V Y  LI+G C  G +  A A    M+ +G
Sbjct: 267 LLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKG 326

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PD++ YN L+N LCK  ++DE+          G+ PD ++Y ++I GLC    + +A 
Sbjct: 327 GTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEAC 386

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             LL +  +   P+  +++ +IDG  + G +  AF + ++M   G  ++V T++ LI   
Sbjct: 387 RLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGL 446

Query: 447 TRGGSIFDA-----------------------------------FSLKKEMLLDGIFPDV 471
            + G + +A                                     L +EM      P  
Sbjct: 447 CKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSA 506

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRR-----GITPDIITYTELIKGHCARGNMKEAE 526
            TYN+LI   C +  +  A+ L ++   R     G   D I Y+ LI G C  G + EA 
Sbjct: 507 VTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEAL 566

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           + F ++   G+  DHI + IL +  +      K++D+H+
Sbjct: 567 DYFQEMIDNGVIPDHITYSILLEGLK------KSKDLHE 599



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 197/422 (46%), Gaps = 10/422 (2%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PDV T+  L+   C+ G++++A     EM      PN    +  I G C+      AL  
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M  +GI  + V +  L+  L K+  L  A+  L E+    D     +V+T   L+D 
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEM---RDHGCEPNVVTYNSLIDG 123

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG---- 326
             KN +  +A  L+  M        +V YN L++G    G +  A A F +ML R     
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183

Query: 327 ---FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
                P+VITY+ L++ LCK  ++ +A      +   G +PD I+Y  ++ GLC    + 
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A E L  ML+   VP    +N ++ G  R   +S+A ++   M   G + NV T+  LI
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G + DA ++  +M+  G  PD+  YN+LI   C    +  ++ L    +  GI 
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 363

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PD++TY+ +I G C    + EA  +   +++ G   D I +  L     +  + D+A D+
Sbjct: 364 PDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDL 423

Query: 564 HQ 565
           ++
Sbjct: 424 YE 425



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 154/335 (45%), Gaps = 45/335 (13%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D L  MRD     CT   +   +  +I  LC  G++  A  +   MI KG  PD++ +N 
Sbjct: 279 DALALMRDMTCRGCT--PNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNM 336

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           L+N LCK   ++++  ++R        P+  TY++ I G CR N LD+A  L   + + G
Sbjct: 337 LINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG 396

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG--D 276
             P+ + ++ L+  LCK G + +A   L EV+A D   A  DV+T + L+D   K G  D
Sbjct: 397 CPPDVILYSTLIDGLCKAGKVDEAFD-LYEVMAGDGCDA--DVVTYSTLIDGLCKAGRVD 453

Query: 277 KF---------------------------------QALALWNDMFQKNIQTDIVAYNVLI 303
           +                                  +A+ L  +M + N     V YN+LI
Sbjct: 454 EAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILI 513

Query: 304 NGFCLNGDISSAFAYFCQMLKR-----GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           +G C    + SA     Q   R     G   D I Y++L++ LCK G++ EA  ++  + 
Sbjct: 514 HGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMI 573

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
             GV PD I+Y  +++GL    D+ + R  +L  +
Sbjct: 574 DNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQM 608



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 130/275 (47%), Gaps = 10/275 (3%)

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           Q D+  Y  L+ GFC  G+I  A   F +M  +  +P+V   + L++ LCK  +  +A  
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            +  +  +G+  D + Y  ++ GL     + +A   L  M +    P    +N +IDG  
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML-------LD 465
           +  +   A  + + M S   S ++ T+N L+    R G +  A +L +EML        D
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
              P+V TY++LI   C    +  A++L + M  RG +PD+ITYT L+ G C    +  A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 526 EEVFAKIQTLGLAIDHIPFRILKK---RYRRMKES 557
            EV  ++   G   + + +  L     R RR+ ++
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDA 280



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 74/172 (43%)

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P+ + +  ++ G+ R G++  A    D M S  +  NVF  + LI    +     DA   
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            + M   GI  D   Y  L+        +  AL +  EM   G  P+++TY  LI G C 
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
                 A+E+F  ++++  +   + +  L     R  + ++A  + Q+ L R
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDR 178


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/415 (32%), Positives = 210/415 (50%), Gaps = 8/415 (1%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R+M   G  PDV   N ++  L      +    V  EM ++   P+  TYN  +  + + 
Sbjct: 185 REMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKE 244

Query: 202 NELDKALHLFSTMANNGIR--PNRVTHNILVHALCKKGLLGDAVKFLGEV-LADDDGKAT 258
              DK   L   M   G    PN VT+N+++  L +KG L +A + + E+ L+      T
Sbjct: 245 GRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSFT 304

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            + + + +L   + K  D  Q      +M  + I   +V YN +I+G   +G I +A A 
Sbjct: 305 YNPLITGLLARGFVKKVDDLQL-----EMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAK 359

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           F +M   G LPDVITYN+LLN  CK G   EA   +G L + G+AP  ++Y  +I G C 
Sbjct: 360 FVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 419

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            GD+ +AR     M+E+  +P+ + + +++ G      L+      D MLS G+  + F 
Sbjct: 420 LGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFA 479

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N  I AE   G I  +F L++ ++L+GI  D  TYN+LI   C  G++  A +L  +M+
Sbjct: 480 YNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMI 539

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
             G+ PD ITYT LI  HC RG ++EA + F  + + GL    + + ++   Y R
Sbjct: 540 SNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCR 594



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 222/437 (50%), Gaps = 12/437 (2%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS---PNCATYNAFITGYC 199
           +M+Q G  P ++T+N L++   K G  +K D +++EM E R S   PN  TYN  I G  
Sbjct: 221 EMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEM-EARGSSCLPNDVTYNVVIAGLA 279

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R   L++A  L   M  +  + +  T+N L+  L  +G +        E+  +++G   +
Sbjct: 280 RKGYLEEAAELVEEMRLSK-KASSFTYNPLITGLLARGFVKKVDDLQLEM--ENEGIMPT 336

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
            V+T   ++    ++G    A A + +M    +  D++ YN L+NG+C  G+   A   F
Sbjct: 337 -VVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLF 395

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             + + G  P V+TYN L++  C+ G L+EA      + + G  PD  +Y  +++G    
Sbjct: 396 GDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNV 455

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
             +   REF   ML K + P+   +N  I      GD+S +F +R++++  G+SS+  T+
Sbjct: 456 CSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTY 515

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N LI    + G++ DA  L  +M+ +G+ PD  TY  LI A C  G +  A + +++M+ 
Sbjct: 516 NILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMIS 575

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G+ P  +TYT +I  +C RGN+  A   F K+   G+  + I + +L     RM  +  
Sbjct: 576 DGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQL 635

Query: 560 A----RDIHQKWLLRNK 572
           A     ++ ++ L+ NK
Sbjct: 636 AYRHFYEMLERGLVPNK 652



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 159/327 (48%), Gaps = 15/327 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  L   G+I  A     +M   G +PDV+T+N L+N  CK G+ ++A  +  ++   
Sbjct: 342 AMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRA 401

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV---HALCKKGLL 239
             +P   TYN  I GYCR+ +L++A  L   M   G  P+  T+ IL+   H +C    L
Sbjct: 402 GLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCS---L 458

Query: 240 GDAVKFLGEVLAD---DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
               +F  E+L+     D  A +  I + I +      GD  ++  L   +  + I +D 
Sbjct: 459 AMTREFFDEMLSKGLRPDCFAYNTRICAEITL------GDISKSFQLREVIMLEGISSDT 512

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YN+LI+G C  G++  A     QM+  G  PD ITY  L++  C++G L EA  F+  
Sbjct: 513 VTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFND 572

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G+ P  ++Y  II   C  G++  A  +   MLE+ V P    +NV+I    R G 
Sbjct: 573 MISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGR 632

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALI 443
              A+     ML  G+  N +T+  LI
Sbjct: 633 TQLAYRHFYEMLERGLVPNKYTYTLLI 659



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 121/253 (47%), Gaps = 5/253 (1%)

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           F +M   G  PDV   N +L  L    + D+ S  +  + + G+ P  ++Y T++     
Sbjct: 184 FREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSK 243

Query: 379 HGDIVKAREFLLSMLEK--SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM-LSFGVSSN 435
            G   K    L  M  +  S +P    +NV+I G  R G L  A  + + M LS   SS 
Sbjct: 244 EGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASS- 302

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
            FT+N LI      G +     L+ EM  +GI P V TYN +I      G I  A   + 
Sbjct: 303 -FTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFV 361

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
           EM   G+ PD+ITY  L+ G+C  GN KEA  +F  ++  GLA   + + IL   Y R+ 
Sbjct: 362 EMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLG 421

Query: 556 ESDKARDIHQKWL 568
           + ++AR + ++ +
Sbjct: 422 DLEEARRLKEEMV 434



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 38/208 (18%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I  +  LR  ++ +G   D +T+N L++ LCK G+L+ A+ ++ +M      P+C TY
Sbjct: 491 GDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITY 550

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I  +C    L +A   F+ M ++G+ P+ VT+ +++HA C++G L            
Sbjct: 551 TCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNL------------ 598

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                                     + A   +  M ++ ++ + + YNVLI+  C  G 
Sbjct: 599 --------------------------YSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGR 632

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLN 339
              A+ +F +ML+RG +P+  TY  L++
Sbjct: 633 TQLAYRHFYEMLERGLVPNKYTYTLLID 660



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 3/146 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G +  A  L  +MI  G  PD +T+  L++  C+ G L +A     +M    
Sbjct: 518 LIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDG 577

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY   I  YCR   L  A   F  M   G+ PN +T+N+L+HALC+ G    A 
Sbjct: 578 LPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAY 637

Query: 244 KFLGEVLADDDGKATSDVITSTILMD 269
           +   E+L   +     +  T T+L+D
Sbjct: 638 RHFYEML---ERGLVPNKYTYTLLID 660



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 40/77 (51%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I   C  G + +A    RKM+++G  P+ +T+N L++ LC++G  + A     EM 
Sbjct: 585 YTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEML 644

Query: 181 EMRPSPNCATYNAFITG 197
           E    PN  TY   I G
Sbjct: 645 ERGLVPNKYTYTLLIDG 661


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 227/435 (52%), Gaps = 17/435 (3%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M++    P++ T+N +VN  CK+G++E+A+  +  + E    P+  TY + I GYC+  
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRK 267

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +LD A  +F  M   G R N V +  L+H LC +  + +A+    + + DDD   T  V 
Sbjct: 268 DLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVK-MKDDDCYPT--VR 324

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T T+L+ +   +  K +AL L  +M +K I+ +I  Y VLI+  C    +  A     QM
Sbjct: 325 TYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQM 384

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L++G +P+VITYN L+N  CK+G +++A     ++    + P+  +Y  +I+G C   ++
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYC-KRNV 443

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA   L  MLE+ V+P+   +N +IDG  R G+  +A+ +  LM   G+  + +T+ ++
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSM 503

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I +  +   + +A  L   +    + P+V  Y  LI   C  G ++ A  + ++ML +  
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNC 563

Query: 503 TPDIITYTELIKGHCARGNMKEA---EEVFAKIQ-TLGLAIDHIPF-RILK--------K 549
            P+ +T+  LI G C  G +KEA   EE   KI     ++ D I   R+LK        +
Sbjct: 564 LPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYR 623

Query: 550 RYRRMKESDKARDIH 564
           R+++M  S    D H
Sbjct: 624 RFQQMLSSGTKPDAH 638



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 228/451 (50%), Gaps = 4/451 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   L+ D+  + ++I   C    + +A  + ++M  KG   + + + +L++ LC    +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRI 304

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  +  +M +    P   TY   I   C      +AL+L   M   GI+PN  T+ +L
Sbjct: 305 DEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVL 364

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           + +LC +  L  A + LG++L   +     +VIT   L++ Y K G    AL +   M  
Sbjct: 365 IDSLCSQCKLEKARELLGQML---EKGLMPNVITYNALINGYCKRGMIEDALDVVELMES 421

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           +N++ +   YN LI G+C   ++  A     +ML+R  LPDV+TYN+L++  C+ G  D 
Sbjct: 422 RNLRPNTRTYNELIKGYC-KRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A     +++  G+ PD  +Y ++I  LC    + +A +   S+ +K V+P   ++  +ID
Sbjct: 481 AYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALID 540

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           GY + G ++ A  + + MLS     N  TFNALI      G + +A  L+++M+   + P
Sbjct: 541 GYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQP 600

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            V T  +LI      G    A + + +ML  G  PD  TYT  I+ +C  G +++AE++ 
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMV 660

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           AK++  G++ D   +  L K Y  +  ++ A
Sbjct: 661 AKMKENGVSPDLFTYSSLIKGYGDLGRTNSA 691



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 207/435 (47%), Gaps = 4/435 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC+  +I  A+ L  KM      P V T+  L+  LC      +A ++++EM 
Sbjct: 291 YTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEME 350

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TY   I   C   +L+KA  L   M   G+ PN +T+N L++  CK+G++ 
Sbjct: 351 EKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA+  + E++   + +  +   T   L+  Y K  +  +A+ + N M ++ +  D+V YN
Sbjct: 411 DALDVV-ELMESRNLRPNTR--TYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYN 466

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G C +G+  SA+     M  RG +PD  TY ++++ LCK  +++EA   +  L + 
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            V P+ + Y  +I G C  G + +A   L  ML K+ +P    +N +I G    G L  A
Sbjct: 527 DVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEA 586

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + M+   +   V T   LI    + G    A+   ++ML  G  PD  TY   I  
Sbjct: 587 TLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQT 646

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  G +  A  +  +M   G++PD+ TY+ LIKG+   G    A  V  ++   G    
Sbjct: 647 YCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPS 706

Query: 541 HIPFRILKKRYRRMK 555
              F  L K    MK
Sbjct: 707 QHTFLSLIKHLLEMK 721



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/456 (29%), Positives = 221/456 (48%), Gaps = 27/456 (5%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E L+ +K M + G     ++ +   +  +I  LC   K+  A  L  +M++KG +P+V+T
Sbjct: 341 EALNLVKEMEEKG-----IKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVIT 395

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +N L+N  CK G +E A  V+  M      PN  TYN  I GYC+ N + KA+ + + M 
Sbjct: 396 YNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKML 454

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
              + P+ VT+N L+   C+ G    A + L   L +D G    D  T T ++DS  K+ 
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS--LMNDRG-LVPDPWTYTSMIDSLCKSK 511

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
              +A  L++ + QK++  ++V Y  LI+G+C  G ++ A     +ML +  LP+ +T+N
Sbjct: 512 RVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFN 571

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            L++ LC  GKL EA+     + K  + P   +   +I  L   GD   A      ML  
Sbjct: 572 ALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSS 631

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
              P+ H +   I  Y R G L +A  +   M   GVS ++FT+++LI      G    A
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSA 691

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIG------------------ASCNLGHIHLALQLYDEM 497
           F + K M   G  P   T+  LI                      N+    + ++L ++M
Sbjct: 692 FVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKM 751

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +  G+TP+  +Y +L+ G C  GN++ AE+VF  +Q
Sbjct: 752 VEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQ 787



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 205/440 (46%), Gaps = 14/440 (3%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +G    +R  MI+     D +     V +LC+  + +       E  E++       Y
Sbjct: 137 GYVGVVFKIRLLMIKSC---DSVADTLFVLDLCRKMNKD-------ESFELKYKLIIGCY 186

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  +    R   +D+   ++  M  + + PN  T+N +V+  CK G + +A +++  ++ 
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV- 245

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     D  T T L+  Y +  D   A  ++ +M  K  + + VAY  LI+G C+   
Sbjct: 246 --EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERR 303

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I  A   F +M      P V TY  L+  LC   +  EA +    + + G+ P+  +Y  
Sbjct: 304 IDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTV 363

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I  LC    + KARE L  MLEK ++P    +N +I+GY + G + +A  + +LM S  
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRN 423

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N  T+N LI    +  ++  A  +  +ML   + PDV TYN LI   C  G+   A 
Sbjct: 424 LRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +L   M  RG+ PD  TYT +I   C    ++EA ++F  ++   +  + + +  L   Y
Sbjct: 483 RLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGY 542

Query: 552 RRMKESDKARDIHQKWLLRN 571
            +  + ++A  + +K L +N
Sbjct: 543 CKAGKVNEAHLMLEKMLSKN 562



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 184/453 (40%), Gaps = 69/453 (15%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G   +A  L   M  +G VPD  T+  +++ LCK   +E+A  +   + + 
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   Y A I GYC+  ++++A  +   M +    PN +T N L+H LC  G L +A
Sbjct: 527 DVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEA 586

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E +   D + T  V T TIL+    K+GD   A   +  M     + D   Y   
Sbjct: 587 T-LLEEKMVKIDLQPT--VSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTF 643

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I  +C  G +  A     +M + G  PD+ TY++L+      G+ + A      +  TG 
Sbjct: 644 IQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGC 703

Query: 363 APDQISYKTIIQ---------------GLCIHGDIVK---AREFLLSMLEKSVVPEPHIW 404
            P Q ++ ++I+               G+C+  ++++     E L  M+E  V P    +
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSY 763

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLS-FGVSSNVFTFNALILA------------------ 445
             ++ G    G+L  A  + D M    G+S +   FNAL+                    
Sbjct: 764 EKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMI 823

Query: 446 -----------------------ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
                                  + RG S+F      + +L  G + D   + ++I    
Sbjct: 824 CVGHLPQLESCKILICRLYKKGEKERGTSVF------QNLLQCGYYDDELAWKIIIDGVG 877

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             G +    +L++ M + G T    TY+ LI+G
Sbjct: 878 KQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 148/342 (43%), Gaps = 21/342 (6%)

Query: 103 TMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNE 162
           T+ +   V+  L+        +I  L   G    A    ++M+  GT PD  T+   +  
Sbjct: 587 TLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQT 646

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
            C+ G L+ A+ ++ +M E   SP+  TY++ I GY  +   + A  +   M + G  P+
Sbjct: 647 YCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPS 706

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
           + T   L+  L +       +K+ G+V   + G     V+++ +  D           + 
Sbjct: 707 QHTFLSLIKHLLE-------MKY-GKVKGGEPGVC---VMSNMMEFDI---------VVE 746

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM-LKRGFLPDVITYNTLLNCL 341
           L   M +  +  +  +Y  L+ G C  G++  A   F  M  K G  P  + +N LL+C 
Sbjct: 747 LLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCC 806

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK  K +EA+     +   G  P   S K +I  L   G+  +      ++L+     + 
Sbjct: 807 CKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDE 866

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
             W +IIDG G+ G +   + + ++M   G + +  T++ LI
Sbjct: 867 LAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLI 908



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/294 (20%), Positives = 122/294 (41%), Gaps = 25/294 (8%)

Query: 100 RLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYL 159
           R + M  +G      + D   +   I+  C  G++  A  +  KM + G  PD+ T++ L
Sbjct: 624 RFQQMLSSGT-----KPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSL 678

Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI---------------TGYCRVN-- 202
           +     +G    A  V++ M +    P+  T+ + I                G C ++  
Sbjct: 679 IKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNM 738

Query: 203 -ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            E D  + L   M  +G+ PN  ++  L+  +C+ G L  A K     +   +G + S++
Sbjct: 739 MEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDH-MQQKEGISPSEL 797

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           + +  L+    K     +A  + +DM        + +  +LI      G+     + F  
Sbjct: 798 VFNA-LLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQN 856

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           +L+ G+  D + +  +++ + KQG ++     + V+ K G      +Y  +I+G
Sbjct: 857 LLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 202/394 (51%), Gaps = 9/394 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC  GK   AL L R+M +    P+ +T+N ++   C  G ++ A  ++REM E  
Sbjct: 120 MLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 175

Query: 184 P-SPNCATYNAFITGYCRVNELDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGD 241
             +PN  TY   I+G+C+V  +D+A+ +F  M   G ++P  V +N L+   C +G L  
Sbjct: 176 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 235

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+ +   ++  + G A + V T  +L+ + F +G   +A  L  +M  K +  D+  YN+
Sbjct: 236 ALLYRDRMV--ERGVAMT-VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 292

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LING C  G++  A   F  M +RG    V+TY  L+  L K+G++ E    +    + G
Sbjct: 293 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG 352

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD + Y  +I      G+I +A E +  M +K + P+   +N ++ G    G +  A 
Sbjct: 353 IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEAR 412

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + D M   G+  ++ T+N LI   +  G + DA  ++ EM+  G  P + TYN LI   
Sbjct: 413 KLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 472

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           C  G    A  +  EM+  GITPD  TY  LI+G
Sbjct: 473 CKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 506



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 189/387 (48%), Gaps = 7/387 (1%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T N ++  LC  G   +A  ++R+M    P PN  TYN  I G+C    +  AL +   M
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREM 171

Query: 215 -ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
               GI PN+ T+  ++   CK G + +AVK   E+L    G+   + +    L+  Y  
Sbjct: 172 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK--GEVKPEAVMYNALIGGYCD 229

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G    AL   + M ++ +   +  YN+L++   ++G  + A+    +M  +G  PDV T
Sbjct: 230 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 289

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN L+N  CK+G + +A   +  +S+ GV    ++Y  +I  L   G + +  +     +
Sbjct: 290 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 349

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            + + P+  ++N +I+ +   G++  AF I   M    ++ +  T+N L+      G + 
Sbjct: 350 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 409

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L  EM   GI PD+ TYN LI      G +  AL++ +EM+ +G  P ++TY  LI
Sbjct: 410 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 469

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAID 540
           +G C  G   +AE +  ++   G+  D
Sbjct: 470 QGLCKNGQGDDAENMVKEMVENGITPD 496



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 149/288 (51%), Gaps = 3/288 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  GK+ TAL  R +M+++G    V T+N LV+ L   G   +A  ++ EM   
Sbjct: 222 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 281

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  TYN  I G+C+   + KAL +F  M+  G+R   VT+  L++AL KKG + + 
Sbjct: 282 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 341

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   E +         D++    L++S+  +G+  +A  +  +M +K I  D V YN L
Sbjct: 342 DKLFDEAVRRG---IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 398

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + G CL G +  A     +M +RG  PD++TYNTL++    +G + +A      +   G 
Sbjct: 399 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 458

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            P  ++Y  +IQGLC +G    A   +  M+E  + P+   +  +I+G
Sbjct: 459 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 506



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 150/286 (52%), Gaps = 6/286 (2%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A AL+ DMF+  +      +N+++   C  G  + A     QM +    P+ +TYNT++ 
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 153

Query: 340 CLCKQGKLDEASHFYGVL-SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SV 397
             C +G++  A      +  + G+AP+Q +Y T+I G C  G + +A +    ML K  V
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            PE  ++N +I GY   G L  A   RD M+  GV+  V T+N L+ A    G   +A+ 
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L +EM   G+ PDVFTYN+LI   C  G++  AL++++ M RRG+   ++TYT LI    
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            +G ++E +++F +    G+  D + +  L   +      D+A +I
Sbjct: 334 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 379



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 169/347 (48%), Gaps = 9/347 (2%)

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A  LF+ M    +     T NI++  LC  G    A++ L ++          + +T   
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM-------PRPNAVTYNT 150

Query: 267 LMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           ++  +   G    AL +  +M ++  I  +   Y  +I+G+C  G +  A   F +ML +
Sbjct: 151 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 210

Query: 326 GFL-PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           G + P+ + YN L+   C QGKLD A  +   + + GVA    +Y  ++  L + G   +
Sbjct: 211 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 270

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A E +  M  K + P+   +N++I+G+ + G++  A  I + M   GV + V T+ ALI 
Sbjct: 271 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 330

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A ++ G + +   L  E +  GI PD+  YN LI +    G+I  A ++  EM ++ I P
Sbjct: 331 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 390

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           D +TY  L++G C  G + EA ++  ++   G+  D + +  L   Y
Sbjct: 391 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 437



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 3/216 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  AL +   M ++G    V+T+  L+  L K G +++ D +  E       P+ 
Sbjct: 298 CKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL 357

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             YNA I  +     +D+A  +   M    I P+ VT+N L+  LC  G + +A K + E
Sbjct: 358 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 417

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +    +     D++T   L+  Y   GD   AL + N+M  K     ++ YN LI G C 
Sbjct: 418 M---TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 474

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           NG    A     +M++ G  PD  TY +L+  L  +
Sbjct: 475 NGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 510



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 73/141 (51%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR  +  D   + A+I      G I  A  +  +M +K   PD +T+N L+  LC +G +
Sbjct: 349 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 408

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  +I EM+E    P+  TYN  I+GY    ++  AL + + M N G  P  +T+N L
Sbjct: 409 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 468

Query: 230 VHALCKKGLLGDAVKFLGEVL 250
           +  LCK G   DA   + E++
Sbjct: 469 IQGLCKNGQGDDAENMVKEMV 489



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 51/90 (56%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I    + G +  AL +R +M+ KG  P +LT+N L+  LCK G  + A+
Sbjct: 423 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 482

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           ++++EM E   +P+ +TY + I G    +E
Sbjct: 483 NMVKEMVENGITPDDSTYISLIEGLTTEDE 512


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 207/413 (50%), Gaps = 4/413 (0%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           IR LC  G++  A+ L  +M      PDV+T+N L+  LCK   +++A   +  M     
Sbjct: 253 IRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGC 311

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+  TYN  I GYC+   L +A  L       G  P+RVT+  L++ LC +G +  A++
Sbjct: 312 IPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALE 371

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              E  A D      D++    L+    + G    AL + N+M ++    DI  YN++IN
Sbjct: 372 LFNEAQAKD---LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIIN 428

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G+IS A       + +G+LPDV T+NTL++  CK+ KLD A      +   G+AP
Sbjct: 429 GLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAP 488

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D I+Y +++ GLC  G   +  E    M+ K   P    +N++I+ + +   L  A  + 
Sbjct: 489 DVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI 548

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
             M   G+  +  +FN LI    R G +  A+ L +++   G      T+N+LIGA  + 
Sbjct: 549 VRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSK 608

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            ++ +A +++ EM+ +G  PD+ TY  L+ G C   N+  A    A++ + G 
Sbjct: 609 LNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGF 661



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 208/421 (49%), Gaps = 4/421 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+  G  PD  TH   +   C  G    A  ++R +SE       A Y   + G     
Sbjct: 131 RMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHG 190

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
               A HLF  M    + P+  T N ++HALC+KG + ++   L +VL       +++  
Sbjct: 191 HGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRG---MSANKF 247

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T  I +    ++G   +A+AL   M    +  D+V YN L+ G C +  +  A  Y  +M
Sbjct: 248 TCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRM 306

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           + +G +PD  TYNT+++  CK G L EA+         G  PD+++Y ++I GLC  GDI
Sbjct: 307 MNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDI 366

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A E       K + P+  ++N ++ G  R G + +A  + + M+  G   +++T+N +
Sbjct: 367 ERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNII 426

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    + G+I DA  +  + ++ G  PDVFT+N LI   C    +  ALQL + M   GI
Sbjct: 427 INGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGI 486

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            PD+ITY  ++ G C  G  KE  E F ++   G   + I + IL + + ++ + ++A  
Sbjct: 487 APDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASG 546

Query: 563 I 563
           +
Sbjct: 547 V 547



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 215/431 (49%), Gaps = 4/431 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  V+R L   G    A  L  +M+ +   PDV T N +++ LC+ GD+ ++  ++ ++ 
Sbjct: 179 YCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVL 238

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   S N  T N +I G C    L++A+ L   M    + P+ VT+N L+  LCK   + 
Sbjct: 239 KRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQ 297

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A ++LG ++  + G    D   +TI+ D Y K+G   +A  L  D   K    D V Y 
Sbjct: 298 EAAQYLGRMM--NQGCIPDDFTYNTII-DGYCKSGMLQEATELLKDAVFKGFVPDRVTYC 354

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LING C  GDI  A   F +   +   PD++ YN+L+  LC+QG +  A      + + 
Sbjct: 355 SLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEE 414

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  PD  +Y  II GLC  G+I  A   +   + K  +P+   +N +IDGY +   L +A
Sbjct: 415 GCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSA 474

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + M ++G++ +V T+N+++    + G   +     +EM+L G  P+  TYN+LI  
Sbjct: 475 LQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIEN 534

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C +  +  A  +   M + G+ PD +++  LI G C  G++  A  +F K+   G +  
Sbjct: 535 FCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSAT 594

Query: 541 HIPFRILKKRY 551
              F IL   Y
Sbjct: 595 ADTFNILIGAY 605



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 215/450 (47%), Gaps = 4/450 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D R H   ++  CL G+   AL L R + ++G       +  +V  L   G    A H+ 
Sbjct: 140 DARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLF 199

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P+ AT+N  +   C+  ++ ++  L + +   G+  N+ T NI +  LC+ 
Sbjct: 200 DEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCED 259

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L +AV  +  + A        DV+T   LM    K+    +A      M  +    D 
Sbjct: 260 GRLEEAVALVERMGA----YVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDD 315

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             YN +I+G+C +G +  A       + +GF+PD +TY +L+N LC +G ++ A   +  
Sbjct: 316 FTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNE 375

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
                + PD + Y ++++GLC  G I+ A + +  M+E+   P+   +N+II+G  + G+
Sbjct: 376 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGN 435

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +S+A  + +  +  G   +VFTFN LI    +   +  A  L + M   GI PDV TYN 
Sbjct: 436 ISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNS 495

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           ++   C  G      + ++EM+ +G  P+ ITY  LI+  C    ++EA  V  ++   G
Sbjct: 496 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDG 555

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           L  D + F  L   + R  + D A  + QK
Sbjct: 556 LVPDAVSFNTLIHGFCRNGDLDGAYLLFQK 585



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 202/390 (51%), Gaps = 3/390 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC   K+  A     +M+ +G +PD  T+N +++  CK G L++A  ++++     
Sbjct: 286 LMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKG 345

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY + I G C   ++++AL LF+      ++P+ V +N LV  LC++GL+  A+
Sbjct: 346 FVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHAL 405

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + + E++ +       D+ T  I+++   K G+   A  + ND   K    D+  +N LI
Sbjct: 406 QVMNEMVEEG---CHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLI 462

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+C    + SA     +M   G  PDVITYN++LN LCK GK  E +  +  +   G  
Sbjct: 463 DGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 522

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ I+Y  +I+  C    + +A   ++ M +  +VP+   +N +I G+ R GDL  A+ +
Sbjct: 523 PNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLL 582

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              +   G S+   TFN LI A +   ++  A  +  EM+  G  PD++TY +L+   C 
Sbjct: 583 FQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCK 642

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELI 513
             ++  A     EM+ +G  P + T+  ++
Sbjct: 643 AANVDRAYAHLAEMISKGFVPSMATFGRML 672



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 184/384 (47%), Gaps = 3/384 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G +  A  L +  + KG VPD +T+  L+N LC  GD+E+A  +  E     
Sbjct: 321 IIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKD 380

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   YN+ + G CR   +  AL + + M   G  P+  T+NI+++ LCK G + DA 
Sbjct: 381 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAA 440

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             + + +         DV T   L+D Y K      AL L   M+   I  D++ YN ++
Sbjct: 441 VVMNDAIVKG---YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVL 497

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C  G        F +M+ +G  P+ ITYN L+   CK  +L+EAS     + + G+ 
Sbjct: 498 NGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLV 557

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +S+ T+I G C +GD+  A      + EK        +N++I  Y    ++  A  I
Sbjct: 558 PDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 617

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+S G   +++T+  L+    +  ++  A++   EM+  G  P + T+  ++     
Sbjct: 618 FGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAM 677

Query: 484 LGHIHLALQLYDEMLRRGITPDII 507
              +  A+ +   M+R G+ P+++
Sbjct: 678 NHRVSEAVAIIHIMVRMGVVPEVV 701



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 165/323 (51%), Gaps = 3/323 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   + ++++ LC  G I  AL +  +M+++G  PD+ T+N ++N LCK+G++  A 
Sbjct: 381 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAA 440

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V+ +       P+  T+N  I GYC+  +LD AL L   M   GI P+ +T+N +++ L
Sbjct: 441 VVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGL 500

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G   +  +   E++         + IT  IL++++ K     +A  +   M Q  + 
Sbjct: 501 CKAGKAKEVNETFEEMILKG---CRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLV 557

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D V++N LI+GFC NGD+  A+  F ++ ++G+     T+N L+     +  +  A   
Sbjct: 558 PDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKI 617

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +G +   G  PD  +Y+ ++ GLC   ++ +A   L  M+ K  VP    +  +++    
Sbjct: 618 FGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAM 677

Query: 414 CGDLSNAFSIRDLMLSFGVSSNV 436
              +S A +I  +M+  GV   V
Sbjct: 678 NHRVSEAVAIIHIMVRMGVVPEV 700


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 202/394 (51%), Gaps = 9/394 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC  GK   AL L R+M +    P+ +T+N ++   C  G ++ A  ++REM E  
Sbjct: 494 MLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 549

Query: 184 P-SPNCATYNAFITGYCRVNELDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGD 241
             +PN  TY   I+G+C+V  +D+A+ +F  M   G ++P  V +N L+   C +G L  
Sbjct: 550 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 609

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+ +   ++  + G A + V T  +L+ + F +G   +A  L  +M  K +  D+  YN+
Sbjct: 610 ALLYRDRMV--ERGVAMT-VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 666

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LING C  G++  A   F  M +RG    V+TY  L+  L K+G++ E    +    + G
Sbjct: 667 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG 726

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD + Y  +I      G+I +A E +  M +K + P+   +N ++ G    G +  A 
Sbjct: 727 IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEAR 786

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + D M   G+  ++ T+N LI   +  G + DA  ++ EM+  G  P + TYN LI   
Sbjct: 787 KLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 846

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           C  G    A  +  EM+  GITPD  TY  LI+G
Sbjct: 847 CKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 880



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 189/387 (48%), Gaps = 7/387 (1%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T N ++  LC  G   +A  ++R+M    P PN  TYN  I G+C    +  AL +   M
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREM 545

Query: 215 -ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
               GI PN+ T+  ++   CK G + +AVK   E+L    G+   + +    L+  Y  
Sbjct: 546 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK--GEVKPEAVMYNALIGGYCD 603

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G    AL   + M ++ +   +  YN+L++   ++G  + A+    +M  +G  PDV T
Sbjct: 604 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 663

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN L+N  CK+G + +A   +  +S+ GV    ++Y  +I  L   G + +  +     +
Sbjct: 664 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 723

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            + + P+  ++N +I+ +   G++  AF I   M    ++ +  T+N L+      G + 
Sbjct: 724 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 783

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L  EM   GI PD+ TYN LI      G +  AL++ +EM+ +G  P ++TY  LI
Sbjct: 784 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 843

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAID 540
           +G C  G   +AE +  ++   G+  D
Sbjct: 844 QGLCKNGQGDDAENMVKEMVENGITPD 870



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 149/288 (51%), Gaps = 3/288 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  GK+ TAL  R +M+++G    V T+N LV+ L   G   +A  ++ EM   
Sbjct: 596 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 655

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  TYN  I G+C+   + KAL +F  M+  G+R   VT+  L++AL KKG + + 
Sbjct: 656 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 715

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   E +         D++    L++S+  +G+  +A  +  +M +K I  D V YN L
Sbjct: 716 DKLFDEAVRRG---IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 772

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + G CL G +  A     +M +RG  PD++TYNTL++    +G + +A      +   G 
Sbjct: 773 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 832

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            P  ++Y  +IQGLC +G    A   +  M+E  + P+   +  +I+G
Sbjct: 833 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 880



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 150/286 (52%), Gaps = 6/286 (2%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A AL+ DMF+  +      +N+++   C  G  + A     QM +    P+ +TYNT++ 
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 527

Query: 340 CLCKQGKLDEASHFYGVL-SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SV 397
             C +G++  A      +  + G+AP+Q +Y T+I G C  G + +A +    ML K  V
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            PE  ++N +I GY   G L  A   RD M+  GV+  V T+N L+ A    G   +A+ 
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L +EM   G+ PDVFTYN+LI   C  G++  AL++++ M RRG+   ++TYT LI    
Sbjct: 648 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 707

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            +G ++E +++F +    G+  D + +  L   +      D+A +I
Sbjct: 708 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 753



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 169/347 (48%), Gaps = 9/347 (2%)

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A  LF+ M    +     T NI++  LC  G    A++ L ++          + +T   
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM-------PRPNAVTYNT 524

Query: 267 LMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           ++  +   G    AL +  +M ++  I  +   Y  +I+G+C  G +  A   F +ML +
Sbjct: 525 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 584

Query: 326 GFL-PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           G + P+ + YN L+   C QGKLD A  +   + + GVA    +Y  ++  L + G   +
Sbjct: 585 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 644

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A E +  M  K + P+   +N++I+G+ + G++  A  I + M   GV + V T+ ALI 
Sbjct: 645 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 704

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A ++ G + +   L  E +  GI PD+  YN LI +    G+I  A ++  EM ++ I P
Sbjct: 705 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 764

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           D +TY  L++G C  G + EA ++  ++   G+  D + +  L   Y
Sbjct: 765 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 811



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 3/231 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I   C  G +  AL +   M ++G    V+T+  L+  L K G +++ D
Sbjct: 657 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 716

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  E       P+   YNA I  +     +D+A  +   M    I P+ VT+N L+  L
Sbjct: 717 KLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 776

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C  G + +A K + E+    +     D++T   L+  Y   GD   AL + N+M  K   
Sbjct: 777 CLLGRVDEARKLIDEMT---ERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 833

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
             ++ YN LI G C NG    A     +M++ G  PD  TY +L+  L  +
Sbjct: 834 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 884



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 74/143 (51%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR  +  D   + A+I      G I  A  +  +M +K   PD +T+N L+  LC +G +
Sbjct: 723 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 782

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  +I EM+E    P+  TYN  I+GY    ++  AL + + M N G  P  +T+N L
Sbjct: 783 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 842

Query: 230 VHALCKKGLLGDAVKFLGEVLAD 252
           +  LCK G   DA   + E++ +
Sbjct: 843 IQGLCKNGQGDDAENMVKEMVEN 865



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 51/90 (56%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I    + G +  AL +R +M+ KG  P +LT+N L+  LCK G  + A+
Sbjct: 797 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 856

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           ++++EM E   +P+ +TY + I G    +E
Sbjct: 857 NMVKEMVENGITPDDSTYISLIEGLTTEDE 886


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 152/541 (28%), Positives = 261/541 (48%), Gaps = 22/541 (4%)

Query: 15  HIQILRFLYQTFDSIKLNVARIFSNSR---TCSD-DDNLPCTLNDIMSYVGDQCRSK--T 68
           +I ++  LY++  S KL+ ++ F+  R    C+  DD L   +  I S V D C      
Sbjct: 90  YITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCN 149

Query: 69  RHWFSNKDSDNEGNPQAVFN--ALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIR 126
           R  F  K  D       +F   A + +  E L+  + M   G        D R  +  + 
Sbjct: 150 RAKFKEKFFD------LLFRVYADNKMFGEALEAFEHMEKKG-----FHIDERSCLVYLL 198

Query: 127 DLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
            L  GG++ + L   R+M+       V +   +++ LCK GD+E    ++ E++      
Sbjct: 199 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 258

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N  TYNAFI GY +  +L     + + M   G+  N VT+ +L+H     G + +A +  
Sbjct: 259 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 318

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            E+    +    +DV   T ++    ++G+  +AL L+++M  K +      Y  LI+G 
Sbjct: 319 EEM---REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGV 375

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C  G + +A     +M  +G   + + +NTL++  C+ G +DEA     V+ K G+  D 
Sbjct: 376 CKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDV 435

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
            +Y +I  GLC      +A+  L SM+E+ V P    +  +ID Y + G+   A  +   
Sbjct: 436 FAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFRE 495

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M   G   N+ T+N LI   ++ G++ +A  LK E+   G+ PDV+T   LI   C  G 
Sbjct: 496 MEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGK 555

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           + +AL+L+DEM +RG+ P+++TYT +I G    G  +EA +++ +++  GL  D   +  
Sbjct: 556 VDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSS 615

Query: 547 L 547
           L
Sbjct: 616 L 616



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 170/337 (50%), Gaps = 3/337 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M ++G   +V+T+  L++    IG +E+A  +  EM E     +   Y + I+  CR   
Sbjct: 286 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 345

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           + +AL LF  M + G+ P+  T+  L+H +CK G +  A   + E+     G   + VI 
Sbjct: 346 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM--QGKGIDLNPVIF 403

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           +T L+D Y ++G   +AL L   M +K +++D+ AYN + +G C       A      M+
Sbjct: 404 NT-LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMV 462

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           +RG  P+ +++ TL++  CK+G   EA   +  + + G  P+ I+Y  +I G    G++ 
Sbjct: 463 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 522

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A +    +  + ++P+ +    +I G    G +  A  + D M   G+  NV T+ A+I
Sbjct: 523 EAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMI 582

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
              ++ G   +AF L  EM   G+ PD   Y+ L+G+
Sbjct: 583 SGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGS 619



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 166/360 (46%), Gaps = 6/360 (1%)

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +AL  F  M   G   +  +  + + AL + G +   ++F   ++  D       V + T
Sbjct: 173 EALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLD---VEVTVYSLT 229

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           I++D   K GD      L +++  K ++ ++V YN  I G+    D+         M K 
Sbjct: 230 IVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKE 289

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G   +V+TY  L++     GK++EA   +  + + G+  D   Y +II   C  G++ +A
Sbjct: 290 GVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRA 349

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
                 M +K ++P  H +  +I G  + G +  A  + + M   G+  N   FN LI  
Sbjct: 350 LVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG 409

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
               G + +A  L+  M   G+  DVF YN +    C L     A  L   M+ RG++P+
Sbjct: 410 YCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPN 469

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR---MKESDKARD 562
            +++T LI  +C  GN  EA+ VF +++  G   + I + +L   Y +   MKE+ K +D
Sbjct: 470 TMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKD 529



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 149/317 (47%), Gaps = 44/317 (13%)

Query: 96  ENLDRL-KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           E   RL + MR+ G     +E D   + ++I   C  G +  AL L  +M  KG +P   
Sbjct: 312 EEAQRLFEEMREKG-----IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAH 366

Query: 155 THNYLVNELCKIGDLEKADHVIREMS----EMRP-------------------------- 184
           T+  L++ +CK G +E A  ++ EM     ++ P                          
Sbjct: 367 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVM 426

Query: 185 -----SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
                  +   YN+  +G C++N  D+A  L  +M   G+ PN ++   L+   CK+G  
Sbjct: 427 EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNF 486

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +A +   E+   ++     ++IT  +L+D Y K G+  +A  L +++  + +  D+   
Sbjct: 487 VEAKRVFREM---EEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTC 543

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
             LI+G C++G +  A   F +M +RG +P+V+TY  +++ L K G+ +EA   Y  + +
Sbjct: 544 TSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKE 603

Query: 360 TGVAPDQISYKTIIQGL 376
           TG+ PD   Y +++  L
Sbjct: 604 TGLTPDDTVYSSLVGSL 620



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 118/253 (46%)

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           +++L   +  N     A   F  M K+GF  D  +    L  L + G++D    F+  + 
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 217

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
              V     S   ++ GLC  GD+   R+ +  +  K V      +N  I+GY +  DL 
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
               I  LM   GV+ NV T+  LI   +  G I +A  L +EM   GI  DV+ Y  +I
Sbjct: 278 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 337

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
             +C  G++  AL L+DEM  +G+ P   TY  LI G C  G M+ A+ +  ++Q  G+ 
Sbjct: 338 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 397

Query: 539 IDHIPFRILKKRY 551
           ++ + F  L   Y
Sbjct: 398 LNPVIFNTLIDGY 410



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 125/285 (43%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +AL  +  M +K    D  +  V +      G + S   +F +M+       V +   +L
Sbjct: 173 EALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVL 232

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           + LCK+G ++        ++  GV  + ++Y   I+G     D+    E L  M ++ V 
Sbjct: 233 DGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVA 292

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
                + ++I G+   G +  A  + + M   G+ ++V+ + ++I    R G++  A  L
Sbjct: 293 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVL 352

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
             EM   G+ P   TY  LI   C  G +  A  L +EM  +GI  + + +  LI G+C 
Sbjct: 353 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 412

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            G + EA  +   ++  GL  D   +  +     ++   D+A+ +
Sbjct: 413 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGL 457


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 152/541 (28%), Positives = 261/541 (48%), Gaps = 22/541 (4%)

Query: 15  HIQILRFLYQTFDSIKLNVARIFSNSR---TCSD-DDNLPCTLNDIMSYVGDQCRSK--T 68
           +I ++  LY++  S KL+ ++ F+  R    C+  DD L   +  I S V D C      
Sbjct: 94  YITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCN 153

Query: 69  RHWFSNKDSDNEGNPQAVFN--ALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIR 126
           R  F  K  D       +F   A + +  E L+  + M   G        D R  +  + 
Sbjct: 154 RAKFKEKFFD------LLFRVYADNKMFGEALEAFEHMEKKG-----FHIDERSCLVYLL 202

Query: 127 DLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
            L  GG++ + L   R+M+       V +   +++ LCK GD+E    ++ E++      
Sbjct: 203 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 262

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N  TYNAFI GY +  +L     + + M   G+  N VT+ +L+H     G + +A +  
Sbjct: 263 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 322

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            E+    +    +DV   T ++    ++G+  +AL L+++M  K +      Y  LI+G 
Sbjct: 323 EEM---REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGV 379

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C  G + +A     +M  +G   + + +NTL++  C+ G +DEA     V+ K G+  D 
Sbjct: 380 CKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDV 439

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
            +Y +I  GLC      +A+  L SM+E+ V P    +  +ID Y + G+   A  +   
Sbjct: 440 FAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFRE 499

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M   G   N+ T+N LI   ++ G++ +A  LK E+   G+ PDV+T   LI   C  G 
Sbjct: 500 MEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGK 559

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           + +AL+L+DEM +RG+ P+++TYT +I G    G  +EA +++ +++  GL  D   +  
Sbjct: 560 VDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSS 619

Query: 547 L 547
           L
Sbjct: 620 L 620



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 166/360 (46%), Gaps = 6/360 (1%)

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +AL  F  M   G   +  +  + + AL + G +   ++F   ++  D       V + T
Sbjct: 177 EALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLD---VEVTVYSLT 233

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           I++D   K GD      L +++  K ++ ++V YN  I G+    D+         M K 
Sbjct: 234 IVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKE 293

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G   +V+TY  L++     GK++EA   +  + + G+  D   Y +II   C  G++ +A
Sbjct: 294 GVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRA 353

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
                 M +K ++P  H +  +I G  + G +  A  + + M   G+  N   FN LI  
Sbjct: 354 LVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG 413

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
               G + +A  L+  M   G+  DVF YN +    C L     A  L   M+ RG++P+
Sbjct: 414 YCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPN 473

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR---MKESDKARD 562
            +++T LI  +C  GN  EA+ VF +++  G   + I + +L   Y +   MKE+ K +D
Sbjct: 474 TMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKD 533



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 118/253 (46%)

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           +++L   +  N     A   F  M K+GF  D  +    L  L + G++D    F+  + 
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 221

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
              V     S   ++ GLC  GD+   R+ +  +  K V      +N  I+GY +  DL 
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
               I  LM   GV+ NV T+  LI   +  G I +A  L +EM   GI  DV+ Y  +I
Sbjct: 282 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 341

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
             +C  G++  AL L+DEM  +G+ P   TY  LI G C  G M+ A+ +  ++Q  G+ 
Sbjct: 342 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 401

Query: 539 IDHIPFRILKKRY 551
           ++ + F  L   Y
Sbjct: 402 LNPVIFNTLIDGY 414



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 125/285 (43%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +AL  +  M +K    D  +  V +      G + S   +F +M+       V +   +L
Sbjct: 177 EALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVL 236

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           + LCK+G ++        ++  GV  + ++Y   I+G     D+    E L  M ++ V 
Sbjct: 237 DGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVA 296

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
                + ++I G+   G +  A  + + M   G+ ++V+ + ++I    R G++  A  L
Sbjct: 297 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVL 356

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
             EM   G+ P   TY  LI   C  G +  A  L +EM  +GI  + + +  LI G+C 
Sbjct: 357 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 416

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            G + EA  +   ++  GL  D   +  +     ++   D+A+ +
Sbjct: 417 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGL 461



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 43/73 (58%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C+ GK+  AL L  +M Q+G VP+V+T+  +++ L K G  E+A  +  EM E 
Sbjct: 549 SLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKET 608

Query: 183 RPSPNCATYNAFI 195
             +P+   Y++ +
Sbjct: 609 GLTPDDTVYSSLV 621


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 226/454 (49%), Gaps = 4/454 (0%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGK-IGTALWLRRKMIQKGTVPDV 153
           ++ L  L TM      R     D   +  VI  L   G+ + TA  L  +M+ +G  PDV
Sbjct: 179 QQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDV 238

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N +++ L K   ++KA  V+  M +    PN  T+N+ + GYC   + + A+ +F  
Sbjct: 239 VTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKR 298

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  +G+ P+  T+N L+  LCK G   +A K    ++       ++   T   L+  Y  
Sbjct: 299 MCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSA---TYGTLLHGYAT 355

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +   L + M +  IQ D   +N+LI  +  +G +  A   F +M ++G  PD +T
Sbjct: 356 EGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVT 415

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y  +++ LC  GK+D+A   +G L   G+ PD + ++ +I GLC      KA E  + M+
Sbjct: 416 YGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMI 475

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            + + P    +N +++   + G ++ A +I DLM+   V  +V T+N LI      G + 
Sbjct: 476 GRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVD 535

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L + M+LDG+ P+  TYN +I   C  G I  A  L+ +M  +G+ P I+TY+ ++
Sbjct: 536 EAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTIL 595

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +G         A+E++  +   G+  D   + I+
Sbjct: 596 QGLFQARRTAAAKELYLWMIKSGIKFDIGTYNII 629



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 197/432 (45%), Gaps = 44/432 (10%)

Query: 123 AVIRDLCLG-GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC-KIGDLEKADHVIREMS 180
           +V+ D C   G +  A     ++I+ G   + +T + L+  LC K    E  D  +R M 
Sbjct: 95  SVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMP 154

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTM-----ANNGIRPNRVTHNILVHALCK 235
            +  +PN  +Y   + G C  N   +ALHL  TM        G  P+ V++N +++ L +
Sbjct: 155 VLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLR 214

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
           +G   D    L + + D     + DV+T   ++ +  K     +A  +   M +     +
Sbjct: 215 EGRQLDTAYHLFDQMLDQG--LSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPN 272

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
            + +N L++G+C +G  + A   F +M + G  PDV TYNTL+  LCK G+  EA   + 
Sbjct: 273 RITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFD 332

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + K G  P+  +Y T++ G    G +VK    L  M+   + P+ +I+N++I  Y    
Sbjct: 333 SMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTY---- 388

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
                                          T+ G + DA  L  +M   G+ PD  TY 
Sbjct: 389 -------------------------------TKHGKVDDAMLLFSKMRRQGLNPDTVTYG 417

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           +++ A C +G +  A+  +  ++  G+TPD + +  LI G CAR    +AEE+  ++   
Sbjct: 418 IVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGR 477

Query: 536 GLAIDHIPFRIL 547
           G+  ++I F  L
Sbjct: 478 GICPNNIFFNTL 489



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 190/435 (43%), Gaps = 38/435 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H +++   C  GK   A+ + ++M + G  PDV T+N L+  LCK G   +A  +   M 
Sbjct: 276 HNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMV 335

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN ATY   + GY     L K  HL   M  NGI+P+    NIL+    K G + 
Sbjct: 336 KRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVD 395

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA+    ++          D +T  I+MD+    G    A+A +  +  + +  D V + 
Sbjct: 396 DAMLLFSKMRRQG---LNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFR 452

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLP------------------------------- 329
            LI+G C       A     +M+ RG  P                               
Sbjct: 453 NLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRV 512

Query: 330 ----DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
               DVITYNTL++  C  GK+DEA+     +   GV P++++Y T+I G C +G I  A
Sbjct: 513 DVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDA 572

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
                 M  K V P    ++ I+ G  +    + A  +   M+  G+  ++ T+N ++L 
Sbjct: 573 FSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLG 632

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             +     DA  + + + L     +  T+N++I A    G    A  L+  +L RG+ P+
Sbjct: 633 LCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPN 692

Query: 506 IITYTELIKGHCARG 520
           ++TY  ++K    +G
Sbjct: 693 VVTYWLMMKSLIEQG 707



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 140/297 (47%), Gaps = 3/297 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   K   A  L  +MI +G  P+ +  N L+N LCK G + +A ++   M  + 
Sbjct: 454 LIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVD 513

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TYN  I GYC   ++D+A  L   M  +G++PN VT+N +++  CK G + DA 
Sbjct: 514 VQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAF 573

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               ++ +         ++T + ++   F+      A  L+  M +  I+ DI  YN+++
Sbjct: 574 SLFRQMASKG---VNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIIL 630

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C N     A   F  +    F  +  T+N +++ L K G+ DEA   +  L   G+ 
Sbjct: 631 LGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLV 690

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           P+ ++Y  +++ L   G + +  +  LS+ +        + N ++    + G++  A
Sbjct: 691 PNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKA 747



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 147/326 (45%), Gaps = 45/326 (13%)

Query: 280 ALALWNDMF---QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
           A++L+  M    +  +  +++ Y+V+I+     G +  AFA   ++++ G+  + IT++ 
Sbjct: 72  AISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSP 131

Query: 337 LLNCLCKQGKLDEASHF-YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML-- 393
           LL  LC + +  EA       +   G  P+  SY  +++GLC      +A   L +M+  
Sbjct: 132 LLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVA 191

Query: 394 ---EKSVVPEPHIWNVIIDGYGRCG-DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
                   P+   +N +I+G  R G  L  A+ + D ML  G+S +V T+N++I A ++ 
Sbjct: 192 DDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKA 251

Query: 450 -----------------------------------GSIFDAFSLKKEMLLDGIFPDVFTY 474
                                              G   DA  + K M  DG+ PDVFTY
Sbjct: 252 RAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTY 311

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N L+G  C  G    A +++D M++RG  P+  TY  L+ G+   G++ +   +   +  
Sbjct: 312 NTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVR 371

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKA 560
            G+  DH  F IL   Y +  + D A
Sbjct: 372 NGIQPDHYIFNILIGTYTKHGKVDDA 397



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 120/280 (42%), Gaps = 38/280 (13%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR  ++ D   +  +I   CL GK+  A  L   M+  G  P+ +T+N ++N  CK G +
Sbjct: 510 VRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRI 569

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E A  + R+M+    +P   TY+  + G  +      A  L+  M  +GI+ +  T+NI+
Sbjct: 570 EDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNII 629

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LC+     DA++                +  +  L+D + +N               
Sbjct: 630 LLGLCQNNCTDDALR----------------IFQNLYLIDFHLENR-------------- 659

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
                    +N++I+     G    A   F  +L RG +P+V+TY  ++  L +QG L+E
Sbjct: 660 --------TFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEE 711

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
               +  L K G   +      ++  L   G++ KA  +L
Sbjct: 712 LDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYL 751


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 215/429 (50%), Gaps = 14/429 (3%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L + M++ G  P V  +N ++  LCK+  ++ A  +  EM +    PN  TYN  I GYC
Sbjct: 179 LMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYC 238

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-T 258
           +V  +++AL     M    +  N VT+N L++ LC  G + DA     EVL + +G    
Sbjct: 239 KVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDA----REVLLEMEGSGFL 294

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSAFA 317
                S +  D     GD        + +F  K I+ D   Y +L+NG C  G I  A  
Sbjct: 295 PGGFLSFVFDDHSNGAGD--------DGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEE 346

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
              ++++ G  P  I+YN L+N  C++G + +A      + + G+ P++I++ T+I   C
Sbjct: 347 VLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFC 406

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G++  A  ++  M+EK V P    +N +I+GYG+ G     F   D M   G+  NV 
Sbjct: 407 ETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVI 466

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           ++ +LI    +   + DA  +  +M+  G+ P+   YN+LI ASC+L  +  A + +DEM
Sbjct: 467 SYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEM 526

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
           ++ GI   ++TY  LI G    G +K+AE++F ++   G   D I +  L   Y +   +
Sbjct: 527 IQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNT 586

Query: 558 DKARDIHQK 566
            K  +++ K
Sbjct: 587 QKCLELYDK 595



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 222/473 (46%), Gaps = 32/473 (6%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC   +I  A  L  +MIQ+  VP+ +T+N L++  CK+G +E+A      M E  
Sbjct: 198 VLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQN 257

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNG------------------------- 218
              N  TYN+ + G C    +D A  +   M  +G                         
Sbjct: 258 VECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFD 317

Query: 219 ---IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
              IR +  T+ IL++ LC+ G +  A + L +++   +   T   I+  IL+++Y + G
Sbjct: 318 GKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLV---ENGVTPSKISYNILVNAYCQEG 374

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
           D  +A+     M ++ ++ + + +N +I+ FC  G++  A  +  +M+++G  P V TYN
Sbjct: 375 DVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYN 434

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           +L+N   ++G       F   + K G+ P+ ISY ++I  LC    ++ A   L  M+ +
Sbjct: 435 SLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGR 494

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
            V P   I+N++I+       L +AF   D M+  G+ + + T+N LI    R G +  A
Sbjct: 495 GVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKA 554

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             L  +M   G  PDV TYN LI       +    L+LYD+M   GI P + T+  LI  
Sbjct: 555 EDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA 614

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            C +  +   +++F ++  + L  D   +  +   Y       KA  +HQ+ +
Sbjct: 615 -CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMV 666



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 201/410 (49%), Gaps = 6/410 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  A+    +M ++G  P+ +T N ++++ C+ G+++ A+  +R M E   SP  
Sbjct: 371 CQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTV 430

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN+ I GY +     +       M   GI+PN +++  L++ LCK   L DA      
Sbjct: 431 ETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEI---- 486

Query: 249 VLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           VLAD  G+  S +     +L+++         A   +++M Q  I   +V YN LING  
Sbjct: 487 VLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLG 546

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            NG +  A   F QM  +G  PDVITYN+L++   K     +    Y  +   G+ P   
Sbjct: 547 RNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVG 606

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           ++  +I   C    +V   +    ML+  +VP+  ++N +I  Y   G++  A S+   M
Sbjct: 607 TFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQM 665

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +  GV  +  T+N+LILA  R   + +   L  +M   G+ P V TYN+LI   C+L   
Sbjct: 666 VDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDF 725

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           + A   Y EM+ RG+  ++    +LI G    G ++EA+ V +++   GL
Sbjct: 726 NGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGGL 775



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 208/424 (49%), Gaps = 8/424 (1%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D  T+  L+N LC++G +EKA+ V+ ++ E   +P+  +YN  +  YC+  ++ KA+   
Sbjct: 324 DERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTT 383

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M   G+ PNR+T N ++   C+ G +  A  ++  ++   +   +  V T   L++ Y
Sbjct: 384 EQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMV---EKGVSPTVETYNSLINGY 440

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            + G   +     ++M +  I+ ++++Y  LIN  C +  +  A      M+ RG  P+ 
Sbjct: 441 GQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNA 500

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
             YN L+   C   KL +A  F+  + ++G+    ++Y T+I GL  +G + KA +  L 
Sbjct: 501 EIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQ 560

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M  K   P+   +N +I GY +  +      + D M   G+   V TF+ LI A  + G 
Sbjct: 561 MAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEG- 619

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           +     + +EML   + PD F YN +I +    G++  A+ L+ +M+ +G+  D +TY  
Sbjct: 620 VVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNS 679

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKW 567
           LI  +     + E + +   ++  GL      + IL K    +K+ + A    R++ ++ 
Sbjct: 680 LILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERG 739

Query: 568 LLRN 571
           LL N
Sbjct: 740 LLLN 743



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 169/378 (44%), Gaps = 38/378 (10%)

Query: 199 CRVNE-LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL---ADDD 254
           C V++ LD+A  L+STM  +G  P+  + N L+  L         +    +V+      D
Sbjct: 97  CSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPD 156

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
             A    + + +++    K+ DK     L   M +  +   + AYN+++ G C    I  
Sbjct: 157 AVAYGKAVQAAVML----KDLDK--GFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKD 210

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A   F +M++R  +P+ +TYNTL++  CK G ++EA  F   + +  V  + ++Y +++ 
Sbjct: 211 ARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLN 270

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVP----------------------------EPHIWNV 406
           GLC  G +  ARE LL M     +P                            +   + +
Sbjct: 271 GLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCI 330

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +++G  R G +  A  +   ++  GV+ +  ++N L+ A  + G +  A    ++M   G
Sbjct: 331 LLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERG 390

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           + P+  T+N +I   C  G +  A      M+ +G++P + TY  LI G+  +G+     
Sbjct: 391 LEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCF 450

Query: 527 EVFAKIQTLGLAIDHIPF 544
           E   ++   G+  + I +
Sbjct: 451 EFLDEMDKAGIKPNVISY 468



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 132/320 (41%), Gaps = 32/320 (10%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A  L++ M +        + N L+     +       A F  ++  G  PD + Y   +
Sbjct: 105 EATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAV 164

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
                   LD+       + K G+ P   +Y  ++ GLC    I  AR+    M+++++V
Sbjct: 165 QAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMV 224

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P    +N +IDGY + G +  A   ++ M    V  N+ T+N+L+      G + DA  +
Sbjct: 225 PNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREV 284

Query: 459 KKEMLLDGIFPDVF----------------------------TYNLLIGASCNLGHIHLA 490
             EM   G  P  F                            TY +L+   C +G I  A
Sbjct: 285 LLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKA 344

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
            ++  +++  G+TP  I+Y  L+  +C  G++K+A     +++  GL  + I F  +  +
Sbjct: 345 EEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISK 404

Query: 551 YRRMKESDKARDIHQKWLLR 570
           +    E D A    + W+ R
Sbjct: 405 FCETGEVDHA----ETWVRR 420



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 1/198 (0%)

Query: 341 LCKQGK-LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           LC   K LDEA+  Y  + K G  P   S   +++ L       K       +++    P
Sbjct: 96  LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   +   +       DL   F +   M+  G+  +VF +N ++    +   I DA  L 
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            EM+   + P+  TYN LI   C +G I  AL   + M  + +  +++TY  L+ G C  
Sbjct: 216 DEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGS 275

Query: 520 GNMKEAEEVFAKIQTLGL 537
           G + +A EV  +++  G 
Sbjct: 276 GRVDDAREVLLEMEGSGF 293


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 207/405 (51%), Gaps = 4/405 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G    +L+  R ++ KG  PDV+    L++ L     ++KA  V+  + E    P+ 
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHIL-ENHGHPDL 126

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             YNA ITG+CR N +D A  +   M N G  P+ VT+NIL+ +LC +G+L  A++F  +
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +L ++       V+T TIL+++    G   +A+ L ++M + N+Q D+  YN +I G C 
Sbjct: 187 LLKEN---CKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G +  AF     +  +G+ PDVITYN LL  L  QGK +        +   G   + ++
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I  +C  G + +    L  M +K + P+ + ++ +I    + G +  A  + D+M+
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           S G   ++  +N ++    +     +A S+ +++   G  P+  +YN +  A  + GH  
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKV 423

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            AL +  EML +G+ PD ITY  LI   C  G + EA E+   ++
Sbjct: 424 RALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDME 468



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 201/443 (45%), Gaps = 10/443 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C   +I +A  +  +M  KG  PD++T+N L+  LC  G L+ A     ++ + 
Sbjct: 131 AIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKE 190

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P   TY   I        +D+A+ L   M    ++P+  T+N ++  +C++G +  A
Sbjct: 191 NCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRA 250

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + +  +     G A  DVIT  IL+      G       L +DM  +  + ++V Y+VL
Sbjct: 251 FQIISSI--SSKGYA-PDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVL 307

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+  C +G +         M K+G  PD   Y+ L+  LCK+G++D A     V+   G 
Sbjct: 308 ISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGC 367

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y TI+  LC      +A      + E    P    +N +       G    A  
Sbjct: 368 VPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALG 427

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG--IFPDVFTYNLLIGA 480
           +   ML  GV  +  T+N+LI    R G + +A  L  +M ++     P V +YN+++  
Sbjct: 428 MILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLG 487

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C +  +  A+++   M+ +G  P+  TYT LI+G    G + +A ++   +  +    +
Sbjct: 488 LCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISE 547

Query: 541 HIPFRILKK-----RYRRMKESD 558
           H   R+ K       YR++  SD
Sbjct: 548 HSFERLYKTFCKLDVYRQLNLSD 570



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 162/338 (47%), Gaps = 4/338 (1%)

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           C+    +++L+    + N G +P+ V    L+H L     +  A+    +V+   +    
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAI----QVMHILENHGH 123

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            D+I    ++  + +      A  + + M  K    DIV YN+LI   C  G + SA  +
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             Q+LK    P V+TY  L+     QG +DEA      + +  + PD  +Y +II+G+C 
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G + +A + + S+  K   P+   +N+++ G    G     + +   M++ G  +NV T
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           ++ LI +  R G + +   L K+M   G+ PD + Y+ LI A C  G + LA+++ D M+
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
             G  PDI+ Y  ++   C +    EA  +F K+  +G
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVG 401



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 163/333 (48%), Gaps = 4/333 (1%)

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G   +++ FL  ++   +     DV+  T L+   F +    +A+ + + + + +  
Sbjct: 68  CKAGNFNESLYFLRHLV---NKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMH-ILENHGH 123

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D++AYN +I GFC    I SA+    +M  +GF PD++TYN L+  LC +G LD A  F
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              L K    P  ++Y  +I+   + G I +A + L  MLE ++ P+   +N II G  R
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G +  AF I   + S G + +V T+N L+      G     + L  +M+  G   +V T
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y++LI + C  G +   + L  +M ++G+ PD   Y  LI   C  G +  A EV   + 
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           + G   D + +  +     + K +D+A  I +K
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEK 396



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 153/315 (48%), Gaps = 8/315 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   + ++IR +C  G +  A  +   +  KG  PDV+T+N L+  L   G  E   
Sbjct: 227 LQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGY 286

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M       N  TY+  I+  CR  ++++ + L   M   G++P+   ++ L+ AL
Sbjct: 287 ELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAAL 346

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G +  A++ L  +++D       D++    ++    K     +AL+++  + +    
Sbjct: 347 CKEGRVDLAIEVLDVMISD---GCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCS 403

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +  +YN + +     G    A     +ML +G  PD ITYN+L++CLC+ G +DEA   
Sbjct: 404 PNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIEL 463

Query: 354 Y--GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                +  +   P  +SY  ++ GLC    +  A E L +M++K   P    +  +I+G 
Sbjct: 464 LVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGI 523

Query: 412 GRCGDLSNAFSIRDL 426
           G  G L++A   RDL
Sbjct: 524 GFGGCLNDA---RDL 535


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 234/462 (50%), Gaps = 4/462 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V  T +++Y   + V+  LC   +   A+   +    K   P V++ N +++  CK+G +
Sbjct: 239 VSGTPQSEYTSSI-VVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFV 297

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           + A      M +    P+  +YN  I G C    + +AL L + M N+G+ P+ VT+NIL
Sbjct: 298 DVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNIL 357

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
                  GL+  A   + ++L         +++T T+L+  + + G+  +AL L+ +M  
Sbjct: 358 AKGFRLLGLINGAWNIIQKMLIKG---PNPNLVTYTVLICGHCQIGNVEEALKLYKEMIS 414

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
              Q  I++  VL+   C +  +  AF  FC+M   G  PD+ITY+TL++ LCKQG++ +
Sbjct: 415 HGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQ 474

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   Y  +    + P+ + +  I+ GLC  G I +AR +   ++  ++  +  ++N++ID
Sbjct: 475 AILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMID 534

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           GY + G+   A  +   +   G+S  + TFN+L+        +  A  L   + L G+ P
Sbjct: 535 GYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEP 594

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +  TY  L+   C  G++   L+L  EM  + I P  ITYT +IKG C +  ++E+ ++ 
Sbjct: 595 NAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLL 654

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             +  +GL  D + +  + + + + ++  KA  ++ K LL N
Sbjct: 655 EDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHN 696



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 219/437 (50%), Gaps = 3/437 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC+ G +G AL L+  M   G  PD++T+N L      +G +  A ++I++M    
Sbjct: 322 LIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKG 381

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P+PN  TY   I G+C++  +++AL L+  M ++G + + ++  +L+ +LCK   +  A 
Sbjct: 382 PNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAF 441

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K   E+ A+       D+IT + L+    K G+  QA+ L+  M    I  + + +  ++
Sbjct: 442 KLFCEMEANG---LRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAIL 498

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C  G IS A  YF  ++      D+I YN +++   K+G   EA   Y  L + G++
Sbjct: 499 MGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGIS 558

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P  +++ +++ G CI+  + +AR  L ++    + P    +  +++ Y   G++ +   +
Sbjct: 559 PTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLEL 618

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M +  +     T+  +I    +   + ++  L ++M   G+ PD  +YN +I A C 
Sbjct: 619 LSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCK 678

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              +  A QLYD+ML   + P  +TY  LI G C  G++K+A+ +   +Q   + ++   
Sbjct: 679 ARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYA 738

Query: 544 FRILKKRYRRMKESDKA 560
           +  + K +    + DKA
Sbjct: 739 YTTIIKAHCAKGDVDKA 755



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 156/343 (45%), Gaps = 32/343 (9%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H A++  LC  GKI  A      +I      D++ +N +++   K G+  +A  + +++ 
Sbjct: 494 HGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLG 553

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   SP   T+N+ + G+C   +L +A  L  T+  +G+ PN VT+  L++  C++G + 
Sbjct: 554 EKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQ 613

Query: 241 DAVKFLGEVLADDDGKA--------------------------------TSDVITSTILM 268
             ++ L E+ A   G                                  T D ++   ++
Sbjct: 614 SLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTII 673

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
            ++ K  D  +A  L++ M   N++   V YN+LINGFC+ GD+  A      +  R   
Sbjct: 674 QAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVN 733

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
            +   Y T++   C +G +D+A  ++  + + G       Y  +I  LC    + +A+ F
Sbjct: 734 LNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYF 793

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
              ML   V P+  ++ V+++ + +CG L++ F +   M+  G
Sbjct: 794 FCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 164/367 (44%), Gaps = 24/367 (6%)

Query: 195 ITGYCRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
           I  +  V + D A+  +  ++N  G + +R +  ++ H L +K  L +    L ++L  +
Sbjct: 97  IIEHLNVEDADSAVDFYYLLSNEFGFQHSRFSRLVVSHVLARKKRLNELRLVLDQMLLHE 156

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
            G  ++  +   +L    F++ D                 +  V +++L   +  +  + 
Sbjct: 157 -GSGSAPSLCELLL--GSFRSWD-----------------SSNVVWDMLACAYSRSAMVH 196

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A     +M    F+  + TYN+LL  L     + +    Y  +  +G    + +   ++
Sbjct: 197 DALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDV---YNEIKVSGTPQSEYTSSIVV 253

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            GLC       A  F      K   P    +N I+  Y + G +  A S   +ML  G+ 
Sbjct: 254 DGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLL 313

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            + +++N LI      GS+ +A  LK +M   G+ PD+ TYN+L      LG I+ A  +
Sbjct: 314 PDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNI 373

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
             +ML +G  P+++TYT LI GHC  GN++EA +++ ++ + G  +  I   +L     +
Sbjct: 374 IQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCK 433

Query: 554 MKESDKA 560
            ++ D A
Sbjct: 434 SRQVDVA 440



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 119/281 (42%), Gaps = 41/281 (14%)

Query: 85  AVFNAL--DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRR 142
             FN+L     +   L + + + DT  +   LE +   +  ++   C  G + + L L  
Sbjct: 562 VTFNSLMYGFCINRKLSQARRLLDTIKLH-GLEPNAVTYTTLMNVYCEEGNMQSLLELLS 620

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M  K   P  +T+  ++  LCK   L+++  ++ +M  +  +P+  +YN  I  +C+  
Sbjct: 621 EMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKAR 680

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           ++ KA  L+  M  + + P  VT+NIL++  C  G L DA   L   ++  + K   +  
Sbjct: 681 DMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLL---VSLQNRKVNLNKY 737

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN---------------------- 300
             T ++ ++   GD  +A+  +  M +K  +  I  Y+                      
Sbjct: 738 AYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMM 797

Query: 301 -------------VLINGFCLNGDISSAFAYFCQMLKRGFL 328
                        VL+N F   G ++S F    +M+K G+L
Sbjct: 798 LSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 202/394 (51%), Gaps = 9/394 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC  GK   AL L R+M +    P+ +T+N ++   C  G ++ A  ++REM E  
Sbjct: 489 MLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 544

Query: 184 P-SPNCATYNAFITGYCRVNELDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGD 241
             +PN  TY   I+G+C+V  +D+A+ +F  M   G ++P  V +N L+   C +G L  
Sbjct: 545 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 604

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+ +   ++  + G A + V T  +L+ + F +G   +A  L  +M  K +  D+  YN+
Sbjct: 605 ALLYRDRMV--ERGVAMT-VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 661

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LING C  G++  A   F  M +RG    V+TY  L+  L K+G++ E    +    + G
Sbjct: 662 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG 721

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD + Y  +I      G+I +A E +  M +K + P+   +N ++ G    G +  A 
Sbjct: 722 IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEAR 781

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + D M   G+  ++ T+N LI   +  G + DA  ++ EM+  G  P + TYN LI   
Sbjct: 782 KLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 841

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           C  G    A  +  EM+  GITPD  TY  LI+G
Sbjct: 842 CKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 875



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 189/387 (48%), Gaps = 7/387 (1%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T N ++  LC  G   +A  ++R+M    P PN  TYN  I G+C    +  AL +   M
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREM 540

Query: 215 -ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
               GI PN+ T+  ++   CK G + +AVK   E+L    G+   + +    L+  Y  
Sbjct: 541 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK--GEVKPEAVMYNALIGGYCD 598

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G    AL   + M ++ +   +  YN+L++   ++G  + A+    +M  +G  PDV T
Sbjct: 599 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 658

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN L+N  CK+G + +A   +  +S+ GV    ++Y  +I  L   G + +  +     +
Sbjct: 659 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 718

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            + + P+  ++N +I+ +   G++  AF I   M    ++ +  T+N L+      G + 
Sbjct: 719 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 778

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L  EM   GI PD+ TYN LI      G +  AL++ +EM+ +G  P ++TY  LI
Sbjct: 779 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 838

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAID 540
           +G C  G   +AE +  ++   G+  D
Sbjct: 839 QGLCKNGQGDDAENMVKEMVENGITPD 865



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 149/288 (51%), Gaps = 3/288 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  GK+ TAL  R +M+++G    V T+N LV+ L   G   +A  ++ EM   
Sbjct: 591 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 650

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  TYN  I G+C+   + KAL +F  M+  G+R   VT+  L++AL KKG + + 
Sbjct: 651 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 710

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   E +         D++    L++S+  +G+  +A  +  +M +K I  D V YN L
Sbjct: 711 DKLFDEAVRR---GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 767

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + G CL G +  A     +M +RG  PD++TYNTL++    +G + +A      +   G 
Sbjct: 768 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 827

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            P  ++Y  +IQGLC +G    A   +  M+E  + P+   +  +I+G
Sbjct: 828 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 875



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 150/286 (52%), Gaps = 6/286 (2%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A AL+ DMF+  +      +N+++   C  G  + A     QM +    P+ +TYNT++ 
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 522

Query: 340 CLCKQGKLDEASHFYGVL-SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SV 397
             C +G++  A      +  + G+AP+Q +Y T+I G C  G + +A +    ML K  V
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            PE  ++N +I GY   G L  A   RD M+  GV+  V T+N L+ A    G   +A+ 
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L +EM   G+ PDVFTYN+LI   C  G++  AL++++ M RRG+   ++TYT LI    
Sbjct: 643 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 702

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            +G ++E +++F +    G+  D + +  L   +      D+A +I
Sbjct: 703 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEI 748



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 169/347 (48%), Gaps = 9/347 (2%)

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A  LF+ M    +     T NI++  LC  G    A++ L ++          + +T   
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM-------PRPNAVTYNT 519

Query: 267 LMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           ++  +   G    AL +  +M ++  I  +   Y  +I+G+C  G +  A   F +ML +
Sbjct: 520 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 579

Query: 326 GFL-PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           G + P+ + YN L+   C QGKLD A  +   + + GVA    +Y  ++  L + G   +
Sbjct: 580 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 639

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A E +  M  K + P+   +N++I+G+ + G++  A  I + M   GV + V T+ ALI 
Sbjct: 640 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 699

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A ++ G + +   L  E +  GI PD+  YN LI +    G+I  A ++  EM ++ I P
Sbjct: 700 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 759

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           D +TY  L++G C  G + EA ++  ++   G+  D + +  L   Y
Sbjct: 760 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 806



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 3/221 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G +  AL +   M ++G    V+T+  L+  L K G +++ D +  E     
Sbjct: 662 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG 721

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   YNA I  +     +D+A  +   M    I P+ VT+N L+  LC  G + +A 
Sbjct: 722 IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEAR 781

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K + E+    +     D++T   L+  Y   GD   AL + N+M  K     ++ YN LI
Sbjct: 782 KLIDEMT---ERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 838

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
            G C NG    A     +M++ G  PD  TY +L+  L  +
Sbjct: 839 QGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 879



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 74/143 (51%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR  +  D   + A+I      G I  A  +  +M +K   PD +T+N L+  LC +G +
Sbjct: 718 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 777

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  +I EM+E    P+  TYN  I+GY    ++  AL + + M N G  P  +T+N L
Sbjct: 778 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 837

Query: 230 VHALCKKGLLGDAVKFLGEVLAD 252
           +  LCK G   DA   + E++ +
Sbjct: 838 IQGLCKNGQGDDAENMVKEMVEN 860



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 51/90 (56%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I    + G +  AL +R +M+ KG  P +LT+N L+  LCK G  + A+
Sbjct: 792 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 851

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           ++++EM E   +P+ +TY + I G    +E
Sbjct: 852 NMVKEMVENGITPDDSTYISLIEGLTTEDE 881


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 223/476 (46%), Gaps = 67/476 (14%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+ +G  P++L +N ++N LCK G++  A+ +++++ E   SP+  TY + I G+CR +
Sbjct: 375 RMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 434

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKK----------------GLLGDAVKFL 246
           +LD AL +F+ MA  G  PN VT++ L++ LC                  G+L  A    
Sbjct: 435 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 494

Query: 247 GEVLADDDGKATSD----------------VITSTILM---------------------D 269
           G ++A  D     D                V T T L+                     D
Sbjct: 495 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 554

Query: 270 SYFKNGDKFQAL--------------ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
             F N   + AL               + N M +  + T+IV YN +I G+C+ GD   A
Sbjct: 555 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKA 614

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                 ML+RG   +++TYNT++   C  G    A     ++   G  PD+ SY  +I G
Sbjct: 615 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 674

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C    +  A      M++  + P    +  +IDGY +   L  A S+ + M   G   N
Sbjct: 675 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 734

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           V T+N LI   T+  +   A  L K M+ +GIFP+V TY  +I   C  G   LAL++++
Sbjct: 735 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 794

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +M+ +G  P+++TY+ LI+     G ++EAE +FA+++  GL  D I +  + + Y
Sbjct: 795 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAY 850



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 202/422 (47%), Gaps = 3/422 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E +   +  +I  LC  G++  A  L R+MI  G +P   T    +  LC +G  E A  
Sbjct: 452 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 511

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  +M      PN  TY A I+G C    L  A+ LF  M+ +G+ PN VT+N L++ L 
Sbjct: 512 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 571

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           +   +  A   L   L   +G  T +++T   ++  Y   GD  +A+ + N+M Q+    
Sbjct: 572 ENRRIKYAFVVLN--LMGRNGLFT-NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 628

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++V YN +I G+C +G+ +SA      M   G  PD  +Y  L+   CK  K++ A   +
Sbjct: 629 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 688

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G+ P++++Y  +I G C    +  A   L  M      P    +NV+I G  + 
Sbjct: 689 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 748

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
            + S A  +  +M+  G+  NV T+ A+I    + GS   A  +  +M+  G  P++ TY
Sbjct: 749 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 808

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           + LI A    G +  A  L+ E+ R G+ PD ITY ++I+ +   G ++ A     ++  
Sbjct: 809 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 868

Query: 535 LG 536
            G
Sbjct: 869 AG 870



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 190/409 (46%), Gaps = 14/409 (3%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            +I+  C  G   +AL +   M   G  PD  ++  L+   CKI  +E A  +  EM +  
Sbjct: 636  IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 695

Query: 184  PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              PN  TY A I GYC+  +LD A  L   M  +G RPN  T+N+L+H L K+     A 
Sbjct: 696  LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 755

Query: 244  KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            + L +V+ ++      +V+T T ++D   KNG    AL ++N M ++    +++ Y+ LI
Sbjct: 756  E-LCKVMIEEG--IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 812

Query: 304  NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
                  G +  A   F ++ + G +PD ITY  ++      GK++ A +F G + K G  
Sbjct: 813  RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 872

Query: 364  PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            P   +Y  +I+GL          E+LL+    + +P+  + N          D  +  S 
Sbjct: 873  PTLWTYGVLIKGL--------KNEYLLADQRLAALPDV-VPNCSFGYQTTDQDAVSVMSA 923

Query: 424  RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            +   L  G+S  V   NAL+   +  G  F+A  L   M+  G+ PD   YN L+ +   
Sbjct: 924  KLAELDPGLSVQV--QNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 981

Query: 484  LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            + ++ LA+ ++  M  +G    +  Y ELI   C     KEA   F  +
Sbjct: 982  VRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENM 1030



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 176/374 (47%), Gaps = 3/374 (0%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            Y+A +    R+      +  +  M + G++PN + +N +++ALCK G + DA   + +V
Sbjct: 352 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 411

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
               + + + D  T T ++  + +  D   AL ++N M ++  + + V Y+ LING C +
Sbjct: 412 F---ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDS 468

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G ++ AF    +M+  G LP   T    +  LC  G  ++A   +  +   G  P+  +Y
Sbjct: 469 GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 528

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             +I GLC+ G +  A      M    V P    +N +I+       +  AF + +LM  
Sbjct: 529 TALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGR 588

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+ +N+ T+N +I      G    A  +   ML  G   ++ TYN +I   C+ G+   
Sbjct: 589 NGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTS 648

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           AL++ D M   G  PD  +YTELI G C    M+ A  +F ++   GL  + + +  L  
Sbjct: 649 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 708

Query: 550 RYRRMKESDKARDI 563
            Y + ++ D A  +
Sbjct: 709 GYCKDEKLDTATSL 722



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 134/308 (43%), Gaps = 35/308 (11%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           + ++  + + Q  ++  + AY+ L+      G  ++    + +ML  G  P+++ YN ++
Sbjct: 333 RTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVI 392

Query: 339 NCLCKQGK-----------------------------------LDEASHFYGVLSKTGVA 363
           N LCK G                                    LD A   +  ++K G  
Sbjct: 393 NALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCE 452

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y T+I GLC  G + +A + +  M+   ++P  H     I      G   +A+ +
Sbjct: 453 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 512

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M + G   NV+T+ ALI      G +  A  L   M  DG+FP+  TYN LI     
Sbjct: 513 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVE 572

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              I  A  + + M R G+  +I+TY E+IKG+C  G+ K+A  V   +   G + + + 
Sbjct: 573 NRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 632

Query: 544 FRILKKRY 551
           +  + K Y
Sbjct: 633 YNTIIKGY 640



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 137/318 (43%), Gaps = 20/318 (6%)

Query: 121  HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
            + A+I  LC  G    AL +  KMI++G +P++LT++ L+  L + G +E+A+++  E+ 
Sbjct: 773  YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 832

Query: 181  EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                 P+  TY   I  Y    +++ A +    M   G +P   T+ +L+     KGL  
Sbjct: 833  RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI-----KGLKN 887

Query: 241  DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            +       +LAD    A  DV+ +       ++  D+     +   + + +    +   N
Sbjct: 888  EY------LLADQRLAALPDVVPNCSFG---YQTTDQDAVSVMSAKLAELDPGLSVQVQN 938

Query: 301  VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
             L++     G    A      M+ +G  PD   YN+LL  L +   +D A   +  +S  
Sbjct: 939  ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 998

Query: 361  GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR------C 414
            G       YK +I  LC      +AR    +ML ++  P+  +  V+IDG  R      C
Sbjct: 999  GCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLC 1058

Query: 415  GDLSNAFSIRDLMLSFGV 432
             +  +    R  M SF +
Sbjct: 1059 MEFLHIMETRRYMPSFHI 1076



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 66/131 (50%)

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           ++   S  D++   G+   +F ++AL++  +R G           ML +G+ P++  YN 
Sbjct: 331 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 390

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +I A C  G++  A  +  ++    ++PD  TYT +I GHC + ++  A +VF ++   G
Sbjct: 391 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 450

Query: 537 LAIDHIPFRIL 547
              + + +  L
Sbjct: 451 CEPNTVTYSTL 461


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 217/442 (49%), Gaps = 42/442 (9%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG-DLEKADHVIREMSEMRPSP 186
           LCL   I  AL +       G +P VL++N +++   +   ++  A++V +EM + + SP
Sbjct: 147 LCL---IDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSP 203

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N  TYN  I G+C    LD AL  F  M   G  PN VT+N L+   CK           
Sbjct: 204 NVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCK----------- 252

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
             +   DDG                           L   M  K ++ ++++YNV+ING 
Sbjct: 253 --LRKIDDG-------------------------FELLRSMALKGLEPNLISYNVVINGL 285

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C  G +        +M KRG+  D +TYNTL+   CK+G   +A   +  + + G++P  
Sbjct: 286 CREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSV 345

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           I+Y ++I  +C  G++ +A EFL  M  + + P    +  ++DG+ + G ++ A+ +   
Sbjct: 346 ITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKE 405

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M+  G S +V T+NALI      G + DA ++ ++M   G+ PDV +Y+ ++   C    
Sbjct: 406 MIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYD 465

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  AL++  +M+ +GI PD ITY+ LI+G C +   KEA ++F ++  +GL  D   +  
Sbjct: 466 VDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTA 525

Query: 547 LKKRYRRMKESDKARDIHQKWL 568
           L   Y    +  KA  +H + +
Sbjct: 526 LINAYCMEGDLQKAIQLHNEMV 547



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 203/406 (50%), Gaps = 38/406 (9%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           ++M+Q    P+V T+N L+   C  G+L+ A      M +    PN  TYN  I GYC++
Sbjct: 194 KEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKL 253

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            ++D    L  +MA  G+ PN +++N++++ LC++G +                K  S V
Sbjct: 254 RKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRM----------------KEISFV 297

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T                      +M ++    D V YN LI G+C  G+   A     +
Sbjct: 298 LT----------------------EMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           ML+ G  P VITY +L++ +CK G ++ A+ F   +   G+ P++ +Y T++ G    G 
Sbjct: 336 MLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + +A   L  M++    P    +N +I+G+   G + +A ++ + M   G++ +V +++ 
Sbjct: 396 MNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYST 455

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           ++    R   + +A  +K++M+  GI PD  TY+ LI   C       A  L+DEMLR G
Sbjct: 456 VLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVG 515

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + PD  TYT LI  +C  G++++A ++  ++   G+  D + + +L
Sbjct: 516 LPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVL 561



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 216/460 (46%), Gaps = 18/460 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR  CL G +  AL    +M +KG +P+V+T+N L++  CK+  ++    ++R M+   
Sbjct: 211 LIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKG 270

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  +YN  I G CR   + +   + + M   G   + VT+N L+   CK+G    A+
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQAL 330

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+L       +  VIT T L+ S  K G+  +A    + M  + +  +   Y  L+
Sbjct: 331 VMHAEMLRHG---LSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLV 387

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GF   G ++ A+    +M+  GF P V+TYN L+N  C  GK+ +A      + + G+ 
Sbjct: 388 DGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLT 447

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +SY T++ G C   D+ +A      M+ K + P+   ++ +I G+        A  +
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDL 507

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D ML  G+  + FT+ ALI A    G +  A  L  EM+  G+ PDV TY++LI     
Sbjct: 508 FDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNK 567

Query: 484 LGHIHLALQLYDEMLRRGITPDIITY---------------TELIKGHCARGNMKEAEEV 528
                 A +L  ++      P  +TY                 LIKG C +G M EA++V
Sbjct: 568 QARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           F  +       D   + ++   + R  +  KA  ++++ +
Sbjct: 628 FESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMV 667



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 213/442 (48%), Gaps = 18/442 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C   KI     L R M  KG  P+++++N ++N LC+ G +++   V+ EM++ 
Sbjct: 245 TLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKR 304

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             S +  TYN  I GYC+     +AL + + M  +G+ P+ +T+  L+H++CK G +  A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRA 364

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +FL ++          +  T T L+D + + G   +A  +  +M        +V YN L
Sbjct: 365 TEFLDQMRVRG---LCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNAL 421

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING C+ G +  A A    M ++G  PDV++Y+T+L+  C+   +DEA      +   G+
Sbjct: 422 INGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGI 481

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD I+Y ++IQG C      +A +    ML   + P+   +  +I+ Y   GDL  A  
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQ 541

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M+  GV  +V T++ LI    +     +A  L  ++  +   P   TY+ LI    
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601

Query: 483 NL---------------GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           N+               G +  A Q+++ ML +   PD   Y  +I GHC  G++++A  
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYS 661

Query: 528 VFAKIQTLGLAIDHIPFRILKK 549
           ++ ++   G  +  +    L K
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVK 683



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 214/435 (49%), Gaps = 20/435 (4%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE +   +  VI  LC  G++    ++  +M ++G   D +T+N L+   CK G+  +A 
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQAL 330

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM     SP+  TY + I   C+   +++A      M   G+ PN  T+  LV   
Sbjct: 331 VMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGF 390

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            +KG + +A + L E++  D+G + S V+T   L++ +   G    A+A+  DM +K + 
Sbjct: 391 SQKGYMNEAYRVLKEMI--DNGFSPS-VVTYNALINGHCIAGKMVDAIAVLEDMKEKGLT 447

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+V+Y+ +++GFC + D+  A     +M+ +G  PD ITY++L+   C+Q +  EA   
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDL 507

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  + + G+ PD+ +Y  +I   C+ GD+ KA +    M+EK V+P+   ++V+I+G  +
Sbjct: 508 FDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNK 567

Query: 414 CGDLSNAFS-IRDLMLSFGVSSNVFTFNALI-----------LAETRG----GSIFDAFS 457
                 A   +  L     V S+V T++ LI           ++  +G    G + +A  
Sbjct: 568 QARTREAKRLLLKLFYEESVPSDV-TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           + + ML     PD   YN++I   C  G I  A  LY EM++ G     +T   L+K   
Sbjct: 627 VFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLH 686

Query: 518 ARGNMKEAEEVFAKI 532
             G + E   V A +
Sbjct: 687 KEGKVNELNSVIANV 701



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 190/408 (46%), Gaps = 39/408 (9%)

Query: 165 KIGDLEKADHVIREMSEMRPSPNCAT--YNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           K  D E A  V R + E     N  +  ++  +  Y R+  +DKAL +      +G  P 
Sbjct: 109 KTLDDEDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPG 168

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
            +++N ++ A  +                                     K    F A  
Sbjct: 169 VLSYNAVLDATIRS------------------------------------KRNISF-AEN 191

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           ++ +M Q  +  ++  YN+LI GFCL G++  A  +F +M K+G LP+V+TYNTL++  C
Sbjct: 192 VFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYC 251

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K  K+D+       ++  G+ P+ ISY  +I GLC  G + +    L  M ++    +  
Sbjct: 252 KLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEV 311

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +N +I GY + G+   A  +   ML  G+S +V T+ +LI +  + G++  A     +M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQM 371

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
            + G+ P+  TY  L+      G+++ A ++  EM+  G +P ++TY  LI GHC  G M
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKM 431

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            +A  V   ++  GL  D + +  +   + R  + D+A  + +K + +
Sbjct: 432 VDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAK 479



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 198/433 (45%), Gaps = 53/433 (12%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I+  C  G    AL +  +M++ G  P V+T+  L++ +CK G++ +A   + +M   
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVR 374

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY   + G+ +   +++A  +   M +NG  P+ VT+N L++  C  G + DA
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDA 434

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  L ++    +   T DV++ + ++  + ++ D  +AL +   M  K I+ D + Y+ L
Sbjct: 435 IAVLEDM---KEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSL 491

Query: 303 INGFC-----------------------------------LNGDISSAFAYFCQMLKRGF 327
           I GFC                                   + GD+  A     +M+++G 
Sbjct: 492 IQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGV 551

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ------------- 374
           LPDV+TY+ L+N L KQ +  EA      L      P  ++Y T+I+             
Sbjct: 552 LPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSL 611

Query: 375 --GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
             G C+ G + +A +   SMLEK+  P+   +NV+I G+ R GD+  A+S+   M+  G 
Sbjct: 612 IKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGF 671

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +  T  AL+    + G + +  S+   +L      +     +L+  +   G++ + L 
Sbjct: 672 LLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLD 731

Query: 493 LYDEMLRRGITPD 505
           +  EM + G  P+
Sbjct: 732 VLAEMAKDGFLPN 744



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 133/263 (50%), Gaps = 21/263 (7%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+ M++ G     L  D   +  V+   C    +  AL ++RKM+ KG  PD +T++ L+
Sbjct: 438 LEDMKEKG-----LTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
              C+    ++A  +  EM  +   P+  TY A I  YC   +L KA+ L + M   G+ 
Sbjct: 493 QGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVL 552

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI-------------- 266
           P+ VT+++L++ L K+    +A + L ++  ++     SDV   T+              
Sbjct: 553 PDVVTYSVLINGLNKQARTREAKRLLLKLFYEES--VPSDVTYHTLIENCSNIEFKSVVS 610

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+  +   G   +A  ++  M +KN + D  AYNV+I+G C  GDI  A++ + +M+K G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSG 670

Query: 327 FLPDVITYNTLLNCLCKQGKLDE 349
           FL   +T   L+  L K+GK++E
Sbjct: 671 FLLHTVTVIALVKTLHKEGKVNE 693


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 237/466 (50%), Gaps = 15/466 (3%)

Query: 83  PQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRR 142
           P ++ N  D +     +R+  MR T P+       + +   ++          TA+ L  
Sbjct: 34  PPSIQNVDDAV--SQFNRMLCMRHTPPI-----IQFNK---ILDSFAKMKHYSTAVSLSH 83

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           ++  KG  PD++T N L+N  C +G +     V+ ++ +    P+  T N  I G C   
Sbjct: 84  RLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKG 143

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS-DV 261
           ++ KALH    +   G + N+V++  L++ +CK G    A+K L ++    DG+ T  +V
Sbjct: 144 QVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKI----DGRLTKPNV 199

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +  + ++D+  K     +A  L+++M  K I  D+V Y+ LI GFC+ G +  A     +
Sbjct: 200 VMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNE 259

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M+ +   P+V TYN L++ LCK+GK+ EA     V+ K  V PD I+Y T++ G  +  +
Sbjct: 260 MVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYE 319

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + KA+    +M    V P+ H + ++I+G+ +   +  A ++   M    +   + T+++
Sbjct: 320 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSS 379

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI    + G I   + L  EM   G   +V TY+ LI   C  GH+  A+ L+++M  +G
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQG 439

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           I P+  T+T L+ G C  G +K+A+EVF  + T G  ++   + ++
Sbjct: 440 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVM 485



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 216/424 (50%), Gaps = 3/424 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G+I     +  K++++G  PD +T N L+  LC  G ++KA H   ++    
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  +Y   I G C++ +   A+ L   +     +PN V ++ ++ ALCK  L+ +A 
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+        ++DV+T + L+  +   G   +A+ L N+M  K I  ++  YN+L+
Sbjct: 220 GLFSEMTVKG---ISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G +  A +    MLK    PDVITY+TL++      ++ +A H +  +S  GV 
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y  +I G C +  + +A      M +K++VP    ++ +IDG  + G +   + +
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M   G  +NV T+++LI    + G +  A +L  +M   GI P+ FT+ +L+   C 
Sbjct: 397 IDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCK 456

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A +++ ++L +G   ++ TY  +I GHC +G ++EA  + +K++  G   D + 
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVT 516

Query: 544 FRIL 547
           F I+
Sbjct: 517 FEII 520



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 175/318 (55%), Gaps = 4/318 (1%)

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           + T  +I    ++DS+ K      A++L + +  K IQ D++  N+LIN FC  G I+  
Sbjct: 54  RHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFG 113

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           F+   ++LKRG+ PD +T NTL+  LC +G++ +A HF+  L   G   +Q+SY T+I G
Sbjct: 114 FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLING 173

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           +C  GD   A + L  +  +   P   +++ IID   +   +S A+ +   M   G+S++
Sbjct: 174 VCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISAD 233

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           V T++ LI      G + +A  L  EM+L  I P+V+TYN+L+ A C  G +  A  +  
Sbjct: 234 VVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLA 293

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
            ML+  + PD+ITY+ L+ G+     +K+A+ VF  +  +G+  D   + IL   + + K
Sbjct: 294 VMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNK 353

Query: 556 ESDKA----RDIHQKWLL 569
             D+A    +++HQK ++
Sbjct: 354 MVDEALNLFKEMHQKNMV 371



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 182/369 (49%), Gaps = 37/369 (10%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  +C  G    A+ L +K+  + T P+V+ ++ +++ LCK   + +A  +  EM+  
Sbjct: 169 TLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVK 228

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             S +  TY+  I G+C   +L +A+ L + M    I PN  T+NILV ALCK+G + +A
Sbjct: 229 GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288

Query: 243 VKFL--------------------GEVLADDDGKA------------TSDVITSTILMDS 270
              L                    G  L  +  KA            T DV T TIL++ 
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + KN    +AL L+ +M QKN+   IV Y+ LI+G C +G I   +    +M  RG   +
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPAN 408

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           VITY++L++ LCK G LD A   +  +   G+ P+  ++  ++ GLC  G +  A+E   
Sbjct: 409 VITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQ 468

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA----E 446
            +L K      + +NV+IDG+ + G L  A ++   M   G   +  TF  +I+A    +
Sbjct: 469 DLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKD 528

Query: 447 TRGGSI-FD 454
             GG++ FD
Sbjct: 529 ENGGNVGFD 537



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 141/260 (54%), Gaps = 2/260 (0%)

Query: 280  ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            A++L + +  K IQ D+   N+LIN FC  G I+  F+   ++LKRG+ PD IT+ TL+N
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 340  CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             LC +G++++A HF+  L   G   +Q+SY T+I G+C  GD   A + L  +  +   P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 400  EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
            +  ++N IID   +   +S A+ +   M   G+S++V T+N LI      G + +A  L 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 460  KEMLLDGIFPDVFTYNLLIGASCNLGHIHL--ALQLYDEMLRRGITPDIITYTELIKGHC 517
             +M+L  I P+V TYN+L+ A C  G   L  +L +  +M   G   + +T+  +I    
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 518  ARGNMKEAEEVFAKIQTLGL 537
             +    + E++  ++   GL
Sbjct: 1185 EKDENDKVEKLLHEMIARGL 1204



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 137/266 (51%), Gaps = 7/266 (2%)

Query: 136  TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
            TA+ L  ++  KG  PD+ T N L+N  C +G +     ++ ++ +    P+  T+   I
Sbjct: 944  TAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLI 1003

Query: 196  TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
             G C   +++KALH    +   G + N+V++  L++ +CK G    A+K L ++    DG
Sbjct: 1004 NGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKI----DG 1059

Query: 256  KATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
            + T  DV+    ++D+  K+    +A  L+ +M  K I  D+V YN LI GFC+ G +  
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119

Query: 315  AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK--LDEASHFYGVLSKTGVAPDQISYKTI 372
            A     +M+ +   P+V TYN L++ LCK+GK  LDE+      +   G   + ++++ I
Sbjct: 1120 AIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEII 1179

Query: 373  IQGLCIHGDIVKAREFLLSMLEKSVV 398
            I  L    +  K  + L  M+ + ++
Sbjct: 1180 ISALFEKDENDKVEKLLHEMIARGLL 1205



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 123/260 (47%), Gaps = 2/260 (0%)

Query: 313  SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
            S+A +   ++  +G  PD+ T N L+NC C  G++         + K G  PD I++ T+
Sbjct: 943  STAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTL 1002

Query: 373  IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
            I GLC+ G + KA  F   +L +        +  +I+G  + GD   A  +   +     
Sbjct: 1003 INGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLT 1062

Query: 433  SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
              +V  +N +I A  +   +  A+ L  EM + GI  DV TYN LI   C +G +  A+ 
Sbjct: 1063 KPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIG 1122

Query: 493  LYDEMLRRGITPDIITYTELIKGHCARGN--MKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
            L ++M+ + I P++ TY  L+   C  G   + E+  + +K++  G   + + F I+   
Sbjct: 1123 LLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISA 1182

Query: 551  YRRMKESDKARDIHQKWLLR 570
                 E+DK   +  + + R
Sbjct: 1183 LFEKDENDKVEKLLHEMIAR 1202



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 117/241 (48%), Gaps = 5/241 (2%)

Query: 207  ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
            A+ L   +   GI+P+  T NIL++  C  G +      L ++L         D IT T 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRG---YHPDTITFTT 1001

Query: 267  LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
            L++     G   +AL   + +  +  Q + V+Y  LING C  GD  +A     ++  R 
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061

Query: 327  FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
              PDV+ YNT+++ LCK   + +A   +  ++  G++ D ++Y T+I G CI G + +A 
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121

Query: 387  EFLLSMLEKSVVPEPHIWNVIIDGYGRCGD--LSNAFSIRDLMLSFGVSSNVFTFNALIL 444
              L  M+ K++ P    +N+++D   + G   L  + S+   M   G  +N  TF  +I 
Sbjct: 1122 GLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIIS 1181

Query: 445  A 445
            A
Sbjct: 1182 A 1182



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 5/208 (2%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
             +I  LCL G++  AL    K++ +G   + +++  L+N +CKIGD   A  ++R++   
Sbjct: 1001 TLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGR 1060

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               P+   YN  I   C+   + KA  LF  M   GI  + VT+N L++  C  G L +A
Sbjct: 1061 LTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEA 1120

Query: 243  VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF--QALALWNDMFQKNIQTDIVAYN 300
            +  L +++         +V T  IL+D+  K G     ++L++ + M     + + V + 
Sbjct: 1121 IGLLNKMVLK---TINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFE 1177

Query: 301  VLINGFCLNGDISSAFAYFCQMLKRGFL 328
            ++I+      +         +M+ RG L
Sbjct: 1178 IIISALFEKDENDKVEKLLHEMIARGLL 1205



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 38/192 (19%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I   C    +  AL L ++M QK  VP ++T++ L++ LCK G +     +I
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT----------- 225
            EM +     N  TY++ I G C+   LD+A+ LF+ M + GIRPN  T           
Sbjct: 398 DEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKG 457

Query: 226 ------------------------HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
                                   +N+++   CK+GLL +A+  L ++   +D     D 
Sbjct: 458 GRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKM---EDNGCIPDA 514

Query: 262 ITSTILMDSYFK 273
           +T  I++ + FK
Sbjct: 515 VTFEIIIIALFK 526



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 74/151 (49%)

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
           ++ +A S  + ML    +  +  FN ++ +  +      A SL   + L GI PD+ T N
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           +LI   C++G I     +  ++L+RG  PD +T   LIKG C +G +K+A     K+   
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           G  ++ + +  L     ++ ++  A  + QK
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQK 189



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 33/138 (23%)

Query: 114  LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            +  D   +  +I   C+ GK+  A+ L  KM+ K   P+V T+N LV+ LCK G      
Sbjct: 1097 ISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGK----- 1151

Query: 174  HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
                                        + LD++L + S M +NG + N VT  I++ AL
Sbjct: 1152 ----------------------------DLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183

Query: 234  CKKGLLGDAVKFLGEVLA 251
             +K       K L E++A
Sbjct: 1184 FEKDENDKVEKLLHEMIA 1201



 Score = 43.5 bits (101), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 47/117 (40%)

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           DA S    ML     P +  +N ++ +   + H   A+ L   +  +GI PD+IT   LI
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
              C  G +     V AKI   G   D +    L K      +  KA   H K L +
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 225/455 (49%), Gaps = 31/455 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            V++ LC   ++ +AL + R M + G VP+ + +  L++ L K   + +A  ++ EM  M
Sbjct: 216 VVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 275

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  T+N  I G C+ + +++A  + + M   G  P+ +T+  L++ LCK G + DA
Sbjct: 276 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRV-DA 334

Query: 243 VK--------------------FLGEVLADDDGKATSDVITS----------TILMDSYF 272
            K                    F+     DD     SD++TS            L+  Y+
Sbjct: 335 AKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 394

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G    AL +  DM  K  + ++ +Y +L++GFC  G I  A+    +M   G  P+ +
Sbjct: 395 KKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTV 454

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            +N L++  CK+ ++ EA   +  + + G  PD  ++ ++I GLC   +I  A   L  M
Sbjct: 455 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 514

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           + + VV     +N +I+ + R G++  A  + + M+  G   +  T+N+LI    R G +
Sbjct: 515 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEV 574

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             A SL ++ML DG+ P   + N+LI   C  G +  A++   EM+ RG TPDI+T+  L
Sbjct: 575 DKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 634

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           I G C  G +++   +F K+Q  G+  D + +  L
Sbjct: 635 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTL 669



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/404 (31%), Positives = 208/404 (51%), Gaps = 10/404 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC   +I  A  +  +M+ +G  PD +T+ YL+N LCKIG ++ A  +   +    
Sbjct: 287 VILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRI---- 342

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDA 242
           P P    +N  I G+     LD A  + S M  + GI P+  T+N L++   KKGL+G A
Sbjct: 343 PKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLA 402

Query: 243 VKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           +    EVL D   K    +V + TIL+D + K G   +A  L N+M    ++ + V +N 
Sbjct: 403 L----EVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNC 458

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LI+ FC    I  A   F +M ++G  PDV T+N+L++ LC+  ++  A      +   G
Sbjct: 459 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 518

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V  + ++Y T+I      G+I +AR+ +  M+ +  + +   +N +I G  R G++  A 
Sbjct: 519 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKAR 578

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           S+ + ML  G+  +  + N LI    R G + +A   +KEM+L G  PD+ T+N LI   
Sbjct: 579 SLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 638

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           C  G I   L ++ ++   GI PD +TY  L+   C  G + +A
Sbjct: 639 CRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDA 682



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 211/452 (46%), Gaps = 15/452 (3%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK-ADHVIREMS 180
           ++++RD    G  G    L  +M    +         +V E+   G+  K A +V  +M 
Sbjct: 144 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 203

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
             +  P   T+   +   C VNE+D AL +   M  +G  PN V +  L+H+L K   + 
Sbjct: 204 SRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 263

Query: 241 DAVKFLGEVL---ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
           +A++ L E+       D +  +DVI      D         +A  + N M  +    D +
Sbjct: 264 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN------EAAKMVNRMLIRGFTPDDI 317

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG-V 356
            Y  L+NG C  G + +A   F ++ K    P  + +NTL++     G+LD+A      +
Sbjct: 318 TYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDM 373

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           ++  G+ PD  +Y ++I G    G +  A E L  M  K   P  + + +++DG+ + G 
Sbjct: 374 VTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGK 433

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A+++ + M + G+  N   FN LI A  +   I +A  + +EM   G  PDV+T+N 
Sbjct: 434 IDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 493

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C +  I  AL L  +M+  G+  + +TY  LI     RG +KEA ++  ++   G
Sbjct: 494 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 553

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             +D I +  L K   R  E DKAR + +K L
Sbjct: 554 SLLDEITYNSLIKGLCRAGEVDKARSLFEKML 585



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 205/469 (43%), Gaps = 43/469 (9%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E  ++ +  V+  L  G     A  +   M+ +   P + T   ++  LC + +++ A  
Sbjct: 173 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALS 232

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+R+M++    PN   Y   I    + N +++AL L   M   G  P+  T N ++  LC
Sbjct: 233 VLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 292

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K   + +A K +  +L       T D IT   LM+   K G    A     D+F +  + 
Sbjct: 293 KFDRINEAAKMVNRMLIRG---FTPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKP 345

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKR-GFLPDVITYNTLL--------------- 338
             V +N LI+GF  +G +  A A    M+   G +PDV TYN+L+               
Sbjct: 346 TSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEV 405

Query: 339 --------------------NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
                               +  CK GK+DEA +    +S  G+ P+ + +  +I   C 
Sbjct: 406 LRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCK 465

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
              I +A E    M  K   P+ + +N +I G     ++ +A  +   M+S GV +N  T
Sbjct: 466 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 525

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N LI A  R G I +A  L  EM+  G   D  TYN LI   C  G +  A  L+++ML
Sbjct: 526 YNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKML 585

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           R G+ P  I+   LI G C  G ++EA E   ++   G   D + F  L
Sbjct: 586 RDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 634



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 127/235 (54%), Gaps = 3/235 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC   +I  ALWL R MI +G V + +T+N L+N   + G++++A  ++ EM   
Sbjct: 493 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 552

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +  TYN+ I G CR  E+DKA  LF  M  +G+ P+ ++ NIL++ LC+ G++ +A
Sbjct: 553 GSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEA 612

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V+F  E++      +T D++T   L++   + G     L ++  +  + I  D V YN L
Sbjct: 613 VEFQKEMVLRG---STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTL 669

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
           ++  C  G +  A     + ++ GF+P+  T++ LL  L  Q  LD  + +  V 
Sbjct: 670 MSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDRRTFYNAVF 724


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 212/419 (50%), Gaps = 3/419 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC  G+   AL L   M+ +G  PDV T+  ++N LCK+G+   A  +I++M E+
Sbjct: 166 TLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEV 225

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY+  I   C+   +++AL +FS M   GI P  V++  L+  LC      +A
Sbjct: 226 GCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEA 285

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E+ + +      D++T ++L+D + K G+  +A  +   M +  ++ +++ YN L
Sbjct: 286 SAMLNEMTSLN---IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSL 342

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+ L  ++  A   F  M+ RG  PDV +Y+ L+N  C   ++DEA   +  +   G+
Sbjct: 343 MHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGL 402

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ +SY T+I   C  G + +ARE    M     +P+   ++V+++G+ + G L  AF 
Sbjct: 403 TPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFR 462

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M    +  N+  +  LI +  + G++  A  L  E+ + G+ PDV  Y  +I   C
Sbjct: 463 LFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLC 522

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
             G +  AL+ + +M   G  P+  +Y  +I+G     +   A ++  +++  G   D 
Sbjct: 523 KEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADE 581



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 228/476 (47%), Gaps = 12/476 (2%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           +L +   +    P  CTL         +I   CL   +     +  K+I+ G  P ++T 
Sbjct: 112 SLSKQMELAGLSPNTCTLNI-------LINCFCLMQHVDLGFSVLAKVIKLGLQPTIITF 164

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
             L+N LCK G+  +A  +  +M      P+  TY   I G C++ E   A  L   M  
Sbjct: 165 TTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGE 224

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G +P+ VT++ L+ +LCK  L+ +A+     + A      +  V++ T L+        
Sbjct: 225 VGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKG---ISPTVVSYTSLIQGLCSFSR 281

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A A+ N+M   NI  DIV +++LI+ FC  G++  A      M + G  P+VITYN+
Sbjct: 282 WKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNS 341

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L++    Q ++ EA   + V+   G  PD  SY  +I G C+   I +A++    M+ + 
Sbjct: 342 LMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQG 401

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           + P    +  +I  + + G L  A  +   M + G   ++ T++ L+    + G +  AF
Sbjct: 402 LTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAF 461

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L + M    + P++  Y +LI + C  G+++ A +L+ E+   G+ PD+  YT +I G 
Sbjct: 462 RLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGL 521

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           C  G + EA E F K++  G   +   + ++ + +  ++  D++R +     +R+K
Sbjct: 522 CKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGF--LQHKDESRAVQLIGEMRDK 575



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 192/370 (51%), Gaps = 4/370 (1%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNEL-DKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           M   +P P    +N  ++   R+ +  D  + L   M   G+ PN  T NIL++  C   
Sbjct: 81  MLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQ 140

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            +      L +V+          +IT T L++   K G+  QAL L++DM  +  Q D+ 
Sbjct: 141 HVDLGFSVLAKVIKLG---LQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVY 197

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            Y  +ING C  G+ ++A     +M + G  PDV+TY+TL++ LCK   ++EA   +  +
Sbjct: 198 TYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYM 257

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
              G++P  +SY ++IQGLC      +A   L  M   +++P+   ++++ID + + G++
Sbjct: 258 KAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNV 317

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             A  +   M   GV  NV T+N+L+   +    + +A  L   M+  G  PDVF+Y++L
Sbjct: 318 LEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSIL 377

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I   C +  I  A QL++EM+ +G+TP+ ++YT LI   C  G ++EA E+F  + T G 
Sbjct: 378 INGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGY 437

Query: 538 AIDHIPFRIL 547
             D   + +L
Sbjct: 438 LPDLCTYSVL 447



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 205/417 (49%), Gaps = 8/417 (1%)

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI---REMSEMRPSPNCAT 190
           I  AL     M+ +  +P ++  N L++ + ++   +  D VI   ++M     SPN  T
Sbjct: 71  IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMR--QYYDAVISLSKQMELAGLSPNTCT 128

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
            N  I  +C +  +D    + + +   G++P  +T   L++ LCK G    A++   +++
Sbjct: 129 LNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMV 188

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
           A        DV T T +++   K G+   A  L   M +   Q D+V Y+ LI+  C + 
Sbjct: 189 ARG---CQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDR 245

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            ++ A   F  M  +G  P V++Y +L+  LC   +  EAS     ++   + PD +++ 
Sbjct: 246 LVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFS 305

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +I   C  G++++A+  L +M E  V P    +N ++ GY    ++  A  + D+M++ 
Sbjct: 306 LLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITR 365

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G   +VF+++ LI        I +A  L  EM+  G+ P+  +Y  LI A C LG +  A
Sbjct: 366 GCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREA 425

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +L+ +M   G  PD+ TY+ L++G C +G + +A  +F  +Q   L  + + + IL
Sbjct: 426 RELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTIL 482



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 147/308 (47%), Gaps = 5/308 (1%)

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           ++++ + M  Y+        ++L   M    +  +    N+LIN FCL   +   F+   
Sbjct: 96  LLSAIVRMRQYYD-----AVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLA 150

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +++K G  P +IT+ TL+N LCK G+  +A   +  +   G  PD  +Y TII GLC  G
Sbjct: 151 KVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMG 210

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
           +   A   +  M E    P+   ++ +ID   +   ++ A  I   M + G+S  V ++ 
Sbjct: 211 ETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYT 270

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           +LI          +A ++  EM    I PD+ T++LLI   C  G++  A  +   M   
Sbjct: 271 SLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEM 330

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G+ P++ITY  L+ G+  +  + EA ++F  + T G   D   + IL   Y  +K  D+A
Sbjct: 331 GVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEA 390

Query: 561 RDIHQKWL 568
           + +  + +
Sbjct: 391 KQLFNEMI 398



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 128/266 (48%), Gaps = 8/266 (3%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           LKTM + G     +E +   + +++    L  ++  A  L   MI +G  PDV +++ L+
Sbjct: 324 LKTMTEMG-----VEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILI 378

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           N  C +  +++A  +  EM     +PN  +Y   I  +C++ +L +A  LF  M  NG  
Sbjct: 379 NGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYL 438

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P+  T+++L+   CK+G LG A +      A        +++  TIL+DS  K+G+   A
Sbjct: 439 PDLCTYSVLLEGFCKQGYLGKAFRLFR---AMQGTYLKPNLVMYTILIDSMCKSGNLNHA 495

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
             L++++F   +Q D+  Y  +ING C  G +  A   F +M + G  P+  +YN ++  
Sbjct: 496 RKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRG 555

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQ 366
             +      A    G +   G   D+
Sbjct: 556 FLQHKDESRAVQLIGEMRDKGFVADE 581



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 137/303 (45%), Gaps = 3/303 (0%)

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC-LNGDISSAFAYFCQMLKRGF 327
            S F+N D   ALA +N M  +     I+ +N L++    +     +  +   QM   G 
Sbjct: 65  SSSFRNID--DALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGL 122

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+  T N L+NC C    +D        + K G+ P  I++ T+I GLC  G+  +A E
Sbjct: 123 SPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALE 182

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M+ +   P+ + +  II+G  + G+ + A  +   M   G   +V T++ LI +  
Sbjct: 183 LFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLC 242

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +   + +A  +   M   GI P V +Y  LI   C+      A  + +EM    I PDI+
Sbjct: 243 KDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIV 302

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           T++ LI   C  GN+ EA+ V   +  +G+  + I +  L   Y    E  +AR +    
Sbjct: 303 TFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVM 362

Query: 568 LLR 570
           + R
Sbjct: 363 ITR 365



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 9/158 (5%)

Query: 94  LKENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           L+E  +  K M   G  P  CT       +  ++   C  G +G A  L R M      P
Sbjct: 422 LREARELFKDMHTNGYLPDLCT-------YSVLLEGFCKQGYLGKAFRLFRAMQGTYLKP 474

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           +++ +  L++ +CK G+L  A  +  E+      P+   Y   I G C+   LD+AL  F
Sbjct: 475 NLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAF 534

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
             M  +G  PN  ++N+++    +      AV+ +GE+
Sbjct: 535 RKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEM 572


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 224/455 (49%), Gaps = 31/455 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            V++  C   +I +AL L R M + G VP+ + +  L++ L K   + +A  ++ EM  M
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  T+N  I G C+ + +++A  + + M   G  P+ +T+  L++ LCK G + DA
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV-DA 340

Query: 243 VK--------------------FLGEVLADDDGKATSDVITS----------TILMDSYF 272
            K                    F+     DD     SD++TS            L+  Y+
Sbjct: 341 AKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G    AL + +DM  K  + ++ +Y +L++GFC  G I  A+    +M   G  P+ +
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            +N L++  CK+ ++ EA   +  + + G  PD  ++ ++I GLC   +I  A   L  M
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           + + VV     +N +I+ + R G++  A  + + M+  G   +  T+N+LI    R G +
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             A SL ++ML DG  P   + N+LI   C  G +  A++   EM+ RG TPDI+T+  L
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           I G C  G +++   +F K+Q  G+  D + F  L
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 220/440 (50%), Gaps = 10/440 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC   +I  A  +  +M+ +G  PD +T+ YL+N LCKIG ++ A  +   +    
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI---- 348

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDA 242
           P P    +N  I G+     LD A  + S M  + GI P+  T+N L++   K+GL+G A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408

Query: 243 VKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           +    EVL D   K    +V + TIL+D + K G   +A  + N+M    ++ + V +N 
Sbjct: 409 L----EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LI+ FC    I  A   F +M ++G  PDV T+N+L++ LC+  ++  A      +   G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V  + ++Y T+I      G+I +AR+ +  M+ +    +   +N +I G  R G++  A 
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           S+ + ML  G + +  + N LI    R G + +A   +KEM+L G  PD+ T+N LI   
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C  G I   L ++ ++   GI PD +T+  L+   C  G + +A  +  +    G   +H
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704

Query: 542 IPFRILKKRYRRMKESDKAR 561
             + IL +     +  D+ R
Sbjct: 705 RTWSILLQSIIPQETLDRRR 724



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 214/452 (47%), Gaps = 15/452 (3%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK-ADHVIREMS 180
           ++++RD    G  G    L  +M    +         +V E+   G+  K A +V  +M 
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 209

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
             +  P   T+   +  +C VNE+D AL L   M  +G  PN V +  L+H+L K   + 
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269

Query: 241 DAVKFLGEVL---ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
           +A++ L E+       D +  +DVI      D         +A  + N M  +    D +
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN------EAAKMVNRMLIRGFAPDDI 323

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG-V 356
            Y  L+NG C  G + +A   F ++ K    P+++ +NTL++     G+LD+A      +
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDM 379

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           ++  G+ PD  +Y ++I G    G +  A E L  M  K   P  + + +++DG+ + G 
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A+++ + M + G+  N   FN LI A  +   I +A  + +EM   G  PDV+T+N 
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C +  I  AL L  +M+  G+  + +TY  LI     RG +KEA ++  ++   G
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             +D I +  L K   R  E DKAR + +K L
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 71/130 (54%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I+ LC  G++  A  L  KM++ G  P  ++ N L+N LC+ G +E+A    +EM   
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  T+N+ I G CR   ++  L +F  +   GI P+ VT N L+  LCK G + DA
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688

Query: 243 VKFLGEVLAD 252
              L E + D
Sbjct: 689 CLLLDEGIED 698



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 42/84 (50%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC  G+I   L + RK+  +G  PD +T N L++ LCK G +  A  ++ E  E 
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIED 698

Query: 183 RPSPNCATYNAFITGYCRVNELDK 206
              PN  T++  +        LD+
Sbjct: 699 GFVPNHRTWSILLQSIIPQETLDR 722


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 208/418 (49%), Gaps = 3/418 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G VP+  T+ YL+  LC+    E+A  V R M+    SPN  +Y+  I G CR  +
Sbjct: 43  MLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK 102

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D+A  L + M + G +PN VT+  L+  LCK G L +AV     ++         D + 
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRG---CPPDGVV 159

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             +L+D + K GD  +A  L+ +M +K     +  YN L++GF   G+     + F  ML
Sbjct: 160 YNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDML 219

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           ++G +P++ T+N LL+  CK G + EA   +  +   G  PD +SY T+++G+C  G   
Sbjct: 220 RQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPH 279

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A+  L  M+   V P+   +N++IDGY + G L +A  +   +   G+  + F+++ +I
Sbjct: 280 EAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTII 339

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               R G +  AF + K+M+ +G  PD      L+   C    +  + +L+  M++    
Sbjct: 340 DCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECV 399

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
           P I  Y  L+   C      +  E+F ++   G + D    +++ +  RR  + + A 
Sbjct: 400 PLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAAE 457



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 204/404 (50%), Gaps = 4/404 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC   +   A  + R M  +G  P+V +++ L+  LC+   +++A  ++ EM +  
Sbjct: 58  LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY + ++G C++ +L +A+ LFS M   G  P+ V +N+L+    KKG +G+A 
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAY 177

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+L   +      V T   L+  + + G+  +  +L+ DM ++    +I  +N L+
Sbjct: 178 RLFEEML---EKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GFC  GD+  A   F +M   G  PDV++YNTL+  +C +GK  EA      + ++GV 
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVG 294

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +SY  +I G    G +  A +    + +  + P+   ++ IID   R G +  AF +
Sbjct: 295 PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVV 354

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M++ G + +      L++   RG  + ++  L + M+     P +  YNLL+   C 
Sbjct: 355 FKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCK 414

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
                   +++ E+  RG +PD +  +++I     R + KEA E
Sbjct: 415 AKRSDDVCEIFHELTERGFSPD-VEISKVILETLRRSDDKEAAE 457



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 204/422 (48%), Gaps = 11/422 (2%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPS---PNCATYNAFITGYCRVNELDKALHL 210
           L++NYL+  L K G   + DHV    ++M  +   PN  TY   +   C+    ++A  +
Sbjct: 18  LSYNYLLEVLAKSG---RCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSV 74

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  MA  G  PN  +++IL+  LC+   + +A + L E++   DG    +V+T   L+  
Sbjct: 75  FRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI---DGGHQPNVVTYGSLLSG 131

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K G   +A+ L++ M  +    D V YNVLI+GF   GD+  A+  F +ML++G +P 
Sbjct: 132 LCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPT 191

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V TYN+LL+   ++G+       +  + + G  P+  ++  ++ G C  GD+V+A    L
Sbjct: 192 VFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFL 251

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M      P+   +N ++ G    G    A  +   M+  GV  ++ ++N LI   ++ G
Sbjct: 252 EMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSG 311

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           ++  A  L  E+   G+ PD F+Y+ +I   C  G +  A  ++ +M+  G  PD     
Sbjct: 312 ALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVI 371

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP-FRILKKRYRRMKESDKARDIHQKWLL 569
            L+ G C    + E+ E+F  +      +  IP + +L  +  + K SD   +I  +   
Sbjct: 372 PLVIGLCRGERLTESCELFQAMVKFE-CVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTE 430

Query: 570 RN 571
           R 
Sbjct: 431 RG 432



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 144/286 (50%), Gaps = 3/286 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  LC  GK+  A+ L  +M+ +G  PD + +N L++   K GD+ +A  +  EM E 
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P   TYN+ ++G+ R  E  +   LF  M   G  PN  T N L+   CK G + +A
Sbjct: 187 GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEA 246

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +   E+ +        DV++   LM      G   +A  L  +M +  +  DIV+YN+L
Sbjct: 247 HRLFLEMRSLG---CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G+  +G +  A   F ++ K G  PD  +Y+T+++CLC+ GK+  A   +  +   G 
Sbjct: 304 IDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGS 363

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           APD      ++ GLC    + ++ E   +M++   VP    +N+++
Sbjct: 364 APDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 50/120 (41%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE D   +  +I  LC  GK+G A  + + MI  G+ PD      LV  LC+   L ++ 
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + + M +    P    YN  +   C+    D    +F  +   G  P+     +++  L
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 231/485 (47%), Gaps = 40/485 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C  GK+  A    +KM   G  P+++T++ L+N    +GD+E A  V++ MSE  
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGDA 242
            S N  TY   I GYC+  ++D+A  +   M     + P+   + +L+   C+ G + DA
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 351

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V+ L E+L    G  T+  I ++ L++ Y K G+  +A  +   M   N++ D  +YN L
Sbjct: 352 VRLLDEMLRL--GLKTNLFICNS-LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTL 408

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+C  G  S AF    +ML+ G  P V+TYNTLL  LC+ G  D+A   + ++ K GV
Sbjct: 409 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGV 468

Query: 363 APDQISYKTI-----------------------------------IQGLCIHGDIVKARE 387
           APD++ Y T+                                   I GLC  G +V+A E
Sbjct: 469 APDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE 528

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M +    P+   +  +IDGY +  ++  AF ++  M    +S ++  +N+LI    
Sbjct: 529 IFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLF 588

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +   + +   L  EM + G+ P++ TY  LI   C  G +  A   Y EM   G++ +II
Sbjct: 589 KSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANII 648

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE-SDKARDIHQK 566
             + ++ G    G + EA  +  K+   G   DH  F     RY  +++ +D   +  + 
Sbjct: 649 ICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKT 708

Query: 567 WLLRN 571
           +LL N
Sbjct: 709 FLLPN 713



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 230/492 (46%), Gaps = 39/492 (7%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           +C      R   +++ +L   G+  TA ++ ++MI+ G VPDV   + +VN  CK G ++
Sbjct: 184 KCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVD 243

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A   +++M  +   PN  TY++ I GY  + +++ A  +   M+  G+  N VT+ +L+
Sbjct: 244 EAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLI 303

Query: 231 HALCKK------------------------------------GLLGDAVKFLGEVLADDD 254
              CK+                                    G + DAV+ L E+L    
Sbjct: 304 KGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLR--L 361

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           G  T+  I ++ L++ Y K G+  +A  +   M   N++ D  +YN L++G+C  G  S 
Sbjct: 362 GLKTNLFICNS-LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           AF    +ML+ G  P V+TYNTLL  LC+ G  D+A   + ++ K GVAPD++ Y T++ 
Sbjct: 421 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLD 480

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           GL    +   A      +L +        +N +I G  + G +  A  I D M   G S 
Sbjct: 481 GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP 540

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +  T+  LI    +  ++  AF +K  M  + I P +  YN LI        +     L 
Sbjct: 541 DGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLL 600

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
            EM  RG+TP+I+TY  LI G C  G + +A   + ++   GL+ + I    +     R+
Sbjct: 601 TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL 660

Query: 555 KESDKARDIHQK 566
              D+A  + QK
Sbjct: 661 GRIDEANLLMQK 672



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 234/490 (47%), Gaps = 51/490 (10%)

Query: 80  EGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALW 139
           EG+    FN  D +L+E ++         P   T  T       +++ LC  G    AL 
Sbjct: 415 EGHTSEAFNLCDKMLQEGIE---------PTVLTYNT-------LLKGLCRVGAFDDALQ 458

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           +   M++ G  PD + ++ L++ L K+ + E A  + +++     + +  T+N  I+G C
Sbjct: 459 IWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC 518

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           ++ ++ +A  +F  M + G  P+ +T+  L+   CK   +G A K  G   A +    + 
Sbjct: 519 KMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKG---AMEREXISP 575

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
            +     L+   FK+    +   L  +M  + +  +IV Y  LI+G+C  G +  AF+ +
Sbjct: 576 SIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSY 635

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF----------------------YGVL 357
            +M + G   ++I  +T+++ L + G++DEA+                        Y  +
Sbjct: 636 FEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAI 695

Query: 358 SK----------TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            K          T + P+ I Y   I GLC  G +  AR F   +  K  VP+   +  +
Sbjct: 696 QKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTL 755

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I GY   G++  AF +RD ML  G+  N+ T+NALI    +  ++  A  L  ++   G+
Sbjct: 756 IHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGL 815

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           FP+V TYN LI   C +G++  A +L D+M+  GI+P ++TY+ LI G C  G+++ + +
Sbjct: 816 FPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMK 875

Query: 528 VFAKIQTLGL 537
           +  ++   G+
Sbjct: 876 LLNQMIKAGV 885



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 224/523 (42%), Gaps = 70/523 (13%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
            L  D R +  +I   C  GKI  A+ L  +M++ G   ++   N L+N  CK G++ +A
Sbjct: 327 ALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEA 386

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
           + VI  M +    P+  +YN  + GYCR     +A +L   M   GI P  +T+N L+  
Sbjct: 387 EGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKG 446

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LC+ G   DA++     L    G A  +V  ST L+D  FK  +   A  LW D+  +  
Sbjct: 447 LCRVGAFDDALQIWH--LMMKXGVAPDEVGYST-LLDGLFKMENFEGASTLWKDILARGF 503

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
               + +N +I+G C  G +  A   F +M   G  PD ITY TL++  CK   + +A  
Sbjct: 504 TKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFK 563

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
             G + +  ++P    Y ++I GL     +V+  + L  M  + + P    +  +IDG+ 
Sbjct: 564 VKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWC 623

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD-- 470
           + G L  AFS    M   G+S+N+   + ++    R G I +A  L ++M+  G FPD  
Sbjct: 624 KEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHE 683

Query: 471 ------------------------------VFTYNLLIGASCNLG--------------- 485
                                            YN+ I   C  G               
Sbjct: 684 CFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK 743

Query: 486 --------------------HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
                               ++  A +L DEMLRRG+ P+I+TY  LI G C   N+  A
Sbjct: 744 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA 803

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           + +F K+   GL  + + +  L   Y ++   D A  +  K +
Sbjct: 804 QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 218/466 (46%), Gaps = 35/466 (7%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  ++   C  G    A  L  KM+Q+G  P VLT+N L+  LC++G  + A 
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M +   +P+   Y+  + G  ++   + A  L+  +   G   +R+T N ++  L
Sbjct: 458 QIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G + +A +   ++    D   + D IT   L+D Y K  +  QA  +   M ++ I 
Sbjct: 518 CKMGKMVEAEEIFDKM---KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXIS 574

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             I  YN LI+G   +  +        +M  RG  P+++TY  L++  CK+G LD+A   
Sbjct: 575 PSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSS 634

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH----------- 402
           Y  +++ G++ + I   T++ GL   G I +A   +  M++    P+             
Sbjct: 635 YFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA 694

Query: 403 ---------------------IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
                                ++N+ I G  + G + +A     ++   G   + FT+  
Sbjct: 695 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCT 754

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI   +  G++ +AF L+ EML  G+ P++ TYN LI   C   ++  A +L+ ++ ++G
Sbjct: 755 LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 814

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + P+++TY  LI G+C  GNM  A ++  K+   G++   + +  L
Sbjct: 815 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSAL 860



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 202/433 (46%), Gaps = 37/433 (8%)

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
            + LW  + ++ +G     +T N +++ LCK+G + +A+ +  +M ++  SP+  TY   
Sbjct: 491 ASTLW--KDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTL 548

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           I GYC+ + + +A  +   M    I P+   +N L+  L K   L +    L E+     
Sbjct: 549 IDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRG- 607

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
              T +++T   L+D + K G   +A + + +M +  +  +I+  + +++G    G I  
Sbjct: 608 --LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 665

Query: 315 AFAYFCQMLKRGFLPD--------------------------------VITYNTLLNCLC 342
           A     +M+  GF PD                                 I YN  +  LC
Sbjct: 666 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC 725

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K GK+D+A  F+ +LS  G  PD  +Y T+I G    G++ +A      ML + +VP   
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 785

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +N +I+G  +  ++  A  +   +   G+  NV T+N LI    + G++  AF LK +M
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           + +GI P V TY+ LI   C  G I  +++L ++M++ G+   +I Y  L++G     N 
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNY 905

Query: 523 KEAEEVFAKIQTL 535
            E  +  A  Q +
Sbjct: 906 NEMSKPEALKQNM 918



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 196/403 (48%), Gaps = 4/403 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G    AL++   M + G +P + + N L+N L K G+   A +V ++M  +   P+    
Sbjct: 170 GLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMV 229

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  +  +C+  ++D+A      M N G+ PN VT++ L++       LGD     G +  
Sbjct: 230 SIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVS---LGDVEAAKGVLKF 286

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNG 310
             +   + +V+T T+L+  Y K     +A  +   M ++  +  D  AY VLI+G+C  G
Sbjct: 287 MSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTG 346

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            I  A     +ML+ G   ++   N+L+N  CK+G++ EA      +    + PD  SY 
Sbjct: 347 KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYN 406

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T++ G C  G   +A      ML++ + P    +N ++ G  R G   +A  I  LM+  
Sbjct: 407 TLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKX 466

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV+ +   ++ L+    +  +   A +L K++L  G      T+N +I   C +G +  A
Sbjct: 467 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            +++D+M   G +PD ITY  LI G+C   N+ +A +V   ++
Sbjct: 527 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 569



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 183/403 (45%), Gaps = 52/403 (12%)

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLA----DDDGKATSDVITST---------- 265
           RPN  ++  LVH L +  +  +   +L +++      D G    D +             
Sbjct: 99  RPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTV 158

Query: 266 --ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             +++  Y + G    AL ++++M +      + + N L+N    NG+  +A   + QM+
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           + G +PDV   + ++N  CK GK+DEA+ F   +   GV P+ ++Y ++I G    GD+ 
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278

Query: 384 KAREFLLSMLEKSV------------------------------------VPEPHIWNVI 407
            A+  L  M EK V                                    VP+   + V+
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 338

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           IDGY R G + +A  + D ML  G+ +N+F  N+LI    + G I +A  +   M+   +
Sbjct: 339 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 398

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PD ++YN L+   C  GH   A  L D+ML+ GI P ++TY  L+KG C  G   +A +
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           ++  +   G+A D + +  L     +M+  + A  + +  L R
Sbjct: 459 IWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILAR 501



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 1/136 (0%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           N+D    +RD   +R  L  +   + A+I  LC    +  A  L  K+ QKG  P+V+T+
Sbjct: 764 NVDEAFRLRDE-MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTY 822

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N L++  CKIG+++ A  +  +M E   SP+  TY+A I G C+  ++++++ L + M  
Sbjct: 823 NTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIK 882

Query: 217 NGIRPNRVTHNILVHA 232
            G+    + +  LV  
Sbjct: 883 AGVDSKLIEYCTLVQG 898


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 236/495 (47%), Gaps = 41/495 (8%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +   I  LC   +      + +KM  K   P+ +++N L+N   K G +  A 
Sbjct: 241 IQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVAT 300

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V  EM E+  SPN  TYN  I GYC     ++AL +   M  N +RPN VT   L++ L
Sbjct: 301 RVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGL 360

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K      A   L     +   + + + I+ T+++D   +NG   +A  L  +M +  + 
Sbjct: 361 YKSAKFDVARNILERYCIN---RTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVH 417

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DI+ ++VLINGFC  G+I+ A     ++ + GF+P+ + ++TL+   CK G + EA  F
Sbjct: 418 PDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKF 477

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  ++  G   D  +  +++  LC +G +V+A EFL  +    +VP    ++ II+GY  
Sbjct: 478 YAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYAN 537

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            GD S AFS+ D M+S G   + FT+ +L+    +G + ++A  L K++    +  D  +
Sbjct: 538 VGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTIS 597

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH-------CA-------- 518
           YN LI      G++  A++L++EM++  I PD  TYT ++ G        CA        
Sbjct: 598 YNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLM 657

Query: 519 ---------------------RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
                                 G  K A  +F +++  GL++D I    +   Y RM + 
Sbjct: 658 QKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKV 717

Query: 558 DKARDIHQKWLLRNK 572
             A  +  K   RNK
Sbjct: 718 FSASSLISK--TRNK 730



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 206/449 (45%), Gaps = 11/449 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR     G +G A+     M+ +G  P V T N ++  + K           ++M   R
Sbjct: 111 LIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSR 170

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN +++N  I+  C   +L KA+++ + M  NG  P  V++N L+   CKKG    A+
Sbjct: 171 VCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFAL 230

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             +  +   +     +DV T  + +DS  +N    Q   +   M  K I  + V+YN LI
Sbjct: 231 VLIHHM---ECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NGF   G I  A   F +M++    P++ITYN L+N  C  G  +EA     V+    V 
Sbjct: 288 NGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVR 347

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI----WNVIIDGYGRCGDLSN 419
           P++++  T++ GL        AR    ++LE+  +    +      V+IDG  R G L  
Sbjct: 348 PNEVTIGTLLNGLYKSAKFDVAR----NILERYCINRTSLNCISHTVMIDGLCRNGLLDE 403

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AF +   M   GV  ++ TF+ LI    + G+I  A  +  ++  +G  P+   ++ LI 
Sbjct: 404 AFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIY 463

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
            SC +G+++ A++ Y  M   G   D  T   L+   C  G + EAEE    I  +GL  
Sbjct: 464 NSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVP 523

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWL 568
           + + F  +   Y  + +   A  +  + +
Sbjct: 524 NSVTFDCIINGYANVGDGSGAFSVFDRMI 552



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 209/427 (48%), Gaps = 9/427 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC+ GK+  A+ +   M + G VP ++++N L++  CK G  + A  +I  M    
Sbjct: 181 LISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKG 240

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TYN FI   CR +   +   +   M N  I PN V++N L++   K+G +G A 
Sbjct: 241 IQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVAT 300

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E++   +   + ++IT  IL++ Y  NG+  +AL + + M   +++ + V    L+
Sbjct: 301 RVFNEMI---ELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLL 357

Query: 304 NGFCLNGDISSA---FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           NG   +     A      +C  + R  L + I++  +++ LC+ G LDEA      + K 
Sbjct: 358 NGLYKSAKFDVARNILERYC--INRTSL-NCISHTVMIDGLCRNGLLDEAFQLLIEMCKD 414

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GV PD I++  +I G C  G+I KA+E +  +  +  VP   I++ +I    + G++  A
Sbjct: 415 GVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEA 474

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
                 M   G +++ FT N+L+ +    G + +A      +   G+ P+  T++ +I  
Sbjct: 475 MKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIING 534

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             N+G    A  ++D M+  G  P   TY  L+K  C   N  EA ++  K+  + LA+D
Sbjct: 535 YANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVD 594

Query: 541 HIPFRIL 547
            I +  L
Sbjct: 595 TISYNTL 601



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 202/444 (45%), Gaps = 4/444 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  +I  LC  G +  A  L  +M + G  PD++T + L+N  CK+G++ KA  V+ ++ 
Sbjct: 388 HTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIY 447

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN   ++  I   C+V  + +A+  ++ M  NG   +  T N LV +LC+ G L 
Sbjct: 448 REGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLV 507

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +FL  +          + +T   +++ Y   GD   A ++++ M           Y 
Sbjct: 508 EAEEFLHHI---SRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYG 564

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L+   C   +   A     ++       D I+YNTL+  + K G L EA   +  + + 
Sbjct: 565 SLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQN 624

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP-EPHIWNVIIDGYGRCGDLSN 419
            + PD  +Y  I+ GL   G +V A  FL  +++K ++     ++   IDG  + G    
Sbjct: 625 NILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKA 684

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +   M   G+S ++   N++    +R G +F A SL  +     + P++ T+N+L+ 
Sbjct: 685 ALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLH 744

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                  I    +LY+ M R G  P+ +TY  LI G C  G ++   ++          I
Sbjct: 745 GYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTI 804

Query: 540 DHIPFRILKKRYRRMKESDKARDI 563
           D + F +L ++   + + DK  D+
Sbjct: 805 DDLTFNMLIRKCCEINDLDKVIDL 828



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 177/392 (45%), Gaps = 38/392 (9%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR------------------------ 220
           S N A ++  I  Y R   +  A++ FS+M   G +                        
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWS 161

Query: 221 -----------PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
                      PN  + NIL+  LC +G L  AV  L   + + +G   + V  +T+L  
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNIL--TMMERNGYVPTIVSYNTLLSW 219

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K   KF AL L + M  K IQ D+  YN+ I+  C N   +  +    +M  +   P
Sbjct: 220 CCKKGRFKF-ALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITP 278

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           + ++YNTL+N   K+GK+  A+  +  + +  ++P+ I+Y  +I G CI+G+  +A   L
Sbjct: 279 NEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVL 338

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M    V P       +++G  +      A +I +       S N  +   +I    R 
Sbjct: 339 DVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRN 398

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + +AF L  EM  DG+ PD+ T+++LI   C +G+I+ A ++  ++ R G  P+ + +
Sbjct: 399 GLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIF 458

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           + LI   C  GN+ EA + +A +   G   D+
Sbjct: 459 STLIYNSCKVGNVYEAMKFYAAMNLNGQNADN 490



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 186/401 (46%), Gaps = 6/401 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +MI  G  P   T+  L+  LCK  +  +A  +++++  +  + +  +YN  I    +  
Sbjct: 550 RMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSG 609

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            L +A+ LF  M  N I P+  T+  ++  L ++G L  A  FLG ++  +    T + I
Sbjct: 610 NLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEI--LTLNSI 667

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             T  +D  FK G    AL L+ +M +K +  D++A N + +G+   G + SA +   + 
Sbjct: 668 VYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKT 727

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
             +  +P++ T+N LL+   +   +      Y ++ ++G  P++++Y ++I GLC HG +
Sbjct: 728 RNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGML 787

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
               + L   + +S   +   +N++I       DL     +   M  F VS +  T  A+
Sbjct: 788 ELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAV 847

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
                R     + F    EML  G  P    Y  ++   C +G I  A +L D+M+  GI
Sbjct: 848 TDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGI 907

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           + D      +++G    G ++EA  +  ++    L +  IP
Sbjct: 908 SLDDAAECAMVRGLALCGKIEEAMWILQRM----LRMKKIP 944



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 160/361 (44%), Gaps = 38/361 (10%)

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           N    ++L+    ++G++G AV     +L          V T  ++M S  KN       
Sbjct: 104 NPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRG---FKPSVYTCNMIMASMVKNCRAHLVW 160

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
           + +  M    +  ++ ++N+LI+  C+ G +  A      M + G++P +++YNTLL+  
Sbjct: 161 SFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWC 220

Query: 342 CKQGKL--------------------------------DEASHFYGVLSKTG---VAPDQ 366
           CK+G+                                   ++  Y VL K     + P++
Sbjct: 221 CKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNE 280

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           +SY T+I G    G I  A      M+E ++ P    +N++I+GY   G+   A  + D+
Sbjct: 281 VSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDV 340

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M +  V  N  T   L+    +      A ++ +   ++    +  ++ ++I   C  G 
Sbjct: 341 MEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGL 400

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A QL  EM + G+ PDIIT++ LI G C  GN+ +A+EV +KI   G   +++ F  
Sbjct: 401 LDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFST 460

Query: 547 L 547
           L
Sbjct: 461 L 461



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 164/350 (46%), Gaps = 3/350 (0%)

Query: 131  GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
             G+   AL+L ++M +KG   D++  N + +   ++G +  A  +I +       PN  T
Sbjct: 679  AGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTT 738

Query: 191  YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
            +N  + GY R  ++     L++ M  +G  PNR+T++ L+  LC  G+L   +K L   +
Sbjct: 739  FNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFI 798

Query: 251  ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
            A+    +T D +T  +L+    +  D  + + L ++M    +  D      + +      
Sbjct: 799  AES---STIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRM 855

Query: 311  DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
               + F +  +MLK+GF+P    Y T++  +C+ G +  A      +   G++ D  +  
Sbjct: 856  VSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAEC 915

Query: 371  TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
             +++GL + G I +A   L  ML    +P    +  ++  + +  +   A +++ LM  +
Sbjct: 916  AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHY 975

Query: 431  GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             V  ++  +N LI A    G +  A    +E+   G+ P++ TY +L+ A
Sbjct: 976  RVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSA 1025



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 154/352 (43%), Gaps = 24/352 (6%)

Query: 218 GIRPNRVTH--NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           G+ PN +TH   I  H L K  L G A   L  +   + G   S+ +   +LMD+Y    
Sbjct: 47  GLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSG---SNFLFG-VLMDTY---- 98

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
                             ++   +++LI  +   G +  A   F  ML RGF P V T N
Sbjct: 99  --------------PLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCN 144

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            ++  + K  +      F+  +  + V P+  S+  +I  LC+ G + KA   L  M   
Sbjct: 145 MIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERN 204

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
             VP    +N ++    + G    A  +   M   G+ ++V T+N  I +  R       
Sbjct: 205 GYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQG 264

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           + + K+M    I P+  +YN LI      G I +A ++++EM+   ++P++ITY  LI G
Sbjct: 265 YLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILING 324

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           +C  GN +EA  V   ++   +  + +    L     +  + D AR+I +++
Sbjct: 325 YCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERY 376



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 105/254 (41%), Gaps = 38/254 (14%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++I  LC  G +   + + +  I + +  D LT N L+ + C+I DL+K   +   M   
Sbjct: 776  SLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVF 835

Query: 183  RPS-----------------------------------PNCATYNAFITGYCRVNELDKA 207
            R S                                   P    Y   +   CRV ++  A
Sbjct: 836  RVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGA 895

Query: 208  LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
              L   M   GI  +      +V  L   G + +A+  L  +L       TS   T T L
Sbjct: 896  FKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTS---TFTTL 952

Query: 268  MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
            M  + K  +  +A  L   M    ++ DIVAYNVLI+  C NGD+ +A  ++ ++ ++G 
Sbjct: 953  MHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGL 1012

Query: 328  LPDVITYNTLLNCL 341
            LP++ TY  L++ +
Sbjct: 1013 LPNMTTYRVLVSAI 1026



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 5/131 (3%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            A++R L L GKI  A+W+ ++M++   +P   T   L++  CK  + ++A ++   M   
Sbjct: 916  AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHY 975

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
            R   +   YN  I+  C   ++  AL  +  +   G+ PN  T+ +LV A+  K  +   
Sbjct: 976  RVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSR- 1034

Query: 243  VKFLGEVLADD 253
                GE++  D
Sbjct: 1035 ----GEIVLKD 1041


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 231/485 (47%), Gaps = 40/485 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C  GK+  A    +KM   G  P+++T++ L+N    +GD+E A  V++ MSE  
Sbjct: 198 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 257

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGDA 242
            S N  TY   I GYC+  ++D+A  +   M     + P+   + +L+   C+ G + DA
Sbjct: 258 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 317

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V+ L E+L    G  T+  I ++ L++ Y K G+  +A  +   M   N++ D  +YN L
Sbjct: 318 VRLLDEMLRL--GLKTNLFICNS-LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTL 374

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+C  G  S AF    +ML+ G  P V+TYNTLL  LC+ G  D+A   + ++ K GV
Sbjct: 375 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGV 434

Query: 363 APDQISYKTI-----------------------------------IQGLCIHGDIVKARE 387
           APD++ Y T+                                   I GLC  G +V+A E
Sbjct: 435 APDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE 494

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M +    P+   +  +IDGY +  ++  AF ++  M    +S ++  +N+LI    
Sbjct: 495 IFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLF 554

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +   + +   L  EM + G+ P++ TY  LI   C  G +  A   Y EM   G++ +II
Sbjct: 555 KSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANII 614

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE-SDKARDIHQK 566
             + ++ G    G + EA  +  K+   G   DH  F     RY  +++ +D   +  + 
Sbjct: 615 ICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKT 674

Query: 567 WLLRN 571
           +LL N
Sbjct: 675 FLLPN 679



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 231/494 (46%), Gaps = 39/494 (7%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           +C      R   +++ +L   G+  TA ++ ++MI+ G VPDV   + +VN  CK G ++
Sbjct: 150 KCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVD 209

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A   +++M  +   PN  TY++ I GY  + +++ A  +   M+  G+  N VT+ +L+
Sbjct: 210 EAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLI 269

Query: 231 HALCKK------------------------------------GLLGDAVKFLGEVLADDD 254
              CK+                                    G + DAV+ L E+L    
Sbjct: 270 KGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLR--L 327

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           G  T+  I ++ L++ Y K G+  +A  +   M   N++ D  +YN L++G+C  G  S 
Sbjct: 328 GLKTNLFICNS-LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 386

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           AF    +ML+ G  P V+TYNTLL  LC+ G  D+A   + ++ K GVAPD++ Y T++ 
Sbjct: 387 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLD 446

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           GL    +   A      +L +        +N +I G  + G +  A  I D M   G S 
Sbjct: 447 GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP 506

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +  T+  LI    +  ++  AF +K  M  + I P +  YN LI        +     L 
Sbjct: 507 DGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL 566

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
            EM  RG+TP+I+TY  LI G C  G + +A   + ++   GL+ + I    +     R+
Sbjct: 567 TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL 626

Query: 555 KESDKARDIHQKWL 568
              D+A  + QK +
Sbjct: 627 GRIDEANLLMQKMV 640



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 224/523 (42%), Gaps = 70/523 (13%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
            L  D R +  +I   C  GKI  A+ L  +M++ G   ++   N L+N  CK G++ +A
Sbjct: 293 ALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEA 352

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
           + VI  M +    P+  +YN  + GYCR     +A +L   M   GI P  +T+N L+  
Sbjct: 353 EGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKG 412

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LC+ G   DA++     L    G A  +V  ST L+D  FK  +   A  LW D+  +  
Sbjct: 413 LCRVGAFDDALQIWH--LMMKRGVAPDEVGYST-LLDGLFKMENFEGASTLWKDILARGF 469

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
               + +N +I+G C  G +  A   F +M   G  PD ITY TL++  CK   + +A  
Sbjct: 470 TKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFK 529

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
             G + +  ++P    Y ++I GL     +V+  + L  M  + + P    +  +IDG+ 
Sbjct: 530 VKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWC 589

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD-- 470
           + G L  AFS    M   G+S+N+   + ++    R G I +A  L ++M+  G FPD  
Sbjct: 590 KEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHE 649

Query: 471 ------------------------------VFTYNLLIGASCNLG--------------- 485
                                            YN+ I   C  G               
Sbjct: 650 CFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK 709

Query: 486 --------------------HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
                               ++  A +L DEMLRRG+ P+I+TY  LI G C   N+  A
Sbjct: 710 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA 769

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           + +F K+   GL  + + +  L   Y ++   D A  +  K +
Sbjct: 770 QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 812



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 216/459 (47%), Gaps = 51/459 (11%)

Query: 80  EGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALW 139
           EG+    FN  D +L+E ++         P   T  T       +++ LC  G    AL 
Sbjct: 381 EGHTSEAFNLCDKMLQEGIE---------PTVLTYNT-------LLKGLCRVGAFDDALQ 424

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           +   M+++G  PD + ++ L++ L K+ + E A  + +++     + +  T+N  I+G C
Sbjct: 425 IWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC 484

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           ++ ++ +A  +F  M + G  P+ +T+  L+   CK   +G A K  G   A +    + 
Sbjct: 485 KMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKG---AMEREPISP 541

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
            +     L+   FK+    +   L  +M  + +  +IV Y  LI+G+C  G +  AF+ +
Sbjct: 542 SIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSY 601

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF----------------------YGVL 357
            +M + G   ++I  +T+++ L + G++DEA+                        Y  +
Sbjct: 602 FEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAI 661

Query: 358 SK----------TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            K          T + P+ I Y   I GLC  G +  AR F   +  K  VP+   +  +
Sbjct: 662 QKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTL 721

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I GY   G++  AF +RD ML  G+  N+ T+NALI    +  ++  A  L  ++   G+
Sbjct: 722 IHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGL 781

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
           FP+V TYN LI   C +G++  A +L D+M+  GI+P I
Sbjct: 782 FPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 215/457 (47%), Gaps = 35/457 (7%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  ++   C  G    A  L  KM+Q+G  P VLT+N L+  LC++G  + A 
Sbjct: 364 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 423

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M +   +P+   Y+  + G  ++   + A  L+  +   G   +R+T N ++  L
Sbjct: 424 QIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 483

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G + +A +   ++    D   + D IT   L+D Y K  +  QA  +   M ++ I 
Sbjct: 484 CKMGKMVEAEEIFDKM---KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPIS 540

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             I  YN LI+G   +  +        +M  RG  P+++TY  L++  CK+G LD+A   
Sbjct: 541 PSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSS 600

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH----------- 402
           Y  +++ G++ + I   T++ GL   G I +A   +  M++    P+             
Sbjct: 601 YFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA 660

Query: 403 ---------------------IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
                                ++N+ I G  + G + +A     ++   G   + FT+  
Sbjct: 661 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCT 720

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI   +  G++ +AF L+ EML  G+ P++ TYN LI   C   ++  A +L+ ++ ++G
Sbjct: 721 LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 780

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
           + P+++TY  LI G+C  GNM  A ++  K+   G++
Sbjct: 781 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGIS 817



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 196/403 (48%), Gaps = 4/403 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G    AL++   M + G +P + + N L+N L K G+   A +V ++M  +   P+    
Sbjct: 136 GLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMV 195

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  +  +C+  ++D+A      M N G+ PN VT++ L++       LGD     G +  
Sbjct: 196 SIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVS---LGDVEAAKGVLKF 252

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNG 310
             +   + +V+T T+L+  Y K     +A  +   M ++  +  D  AY VLI+G+C  G
Sbjct: 253 MSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTG 312

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            I  A     +ML+ G   ++   N+L+N  CK+G++ EA      +    + PD  SY 
Sbjct: 313 KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYN 372

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T++ G C  G   +A      ML++ + P    +N ++ G  R G   +A  I  LM+  
Sbjct: 373 TLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKR 432

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV+ +   ++ L+    +  +   A +L K++L  G      T+N +I   C +G +  A
Sbjct: 433 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 492

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            +++D+M   G +PD ITY  LI G+C   N+ +A +V   ++
Sbjct: 493 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 535



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 183/403 (45%), Gaps = 52/403 (12%)

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLA----DDDGKATSDVITST---------- 265
           RPN  ++  LVH L +  +  +   +L +++      D G    D +             
Sbjct: 65  RPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTV 124

Query: 266 --ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             +++  Y + G    AL ++++M +      + + N L+N    NG+  +A   + QM+
Sbjct: 125 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 184

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           + G +PDV   + ++N  CK GK+DEA+ F   +   GV P+ ++Y ++I G    GD+ 
Sbjct: 185 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 244

Query: 384 KAREFLLSMLEKSV------------------------------------VPEPHIWNVI 407
            A+  L  M EK V                                    VP+   + V+
Sbjct: 245 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 304

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           IDGY R G + +A  + D ML  G+ +N+F  N+LI    + G I +A  +   M+   +
Sbjct: 305 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 364

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PD ++YN L+   C  GH   A  L D+ML+ GI P ++TY  L+KG C  G   +A +
Sbjct: 365 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 424

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           ++  +   G+A D + +  L     +M+  + A  + +  L R
Sbjct: 425 IWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILAR 467


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 231/485 (47%), Gaps = 40/485 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C  GK+  A    +KM   G  P+++T++ L+N    +GD+E A  V++ MSE  
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGDA 242
            S N  TY   I GYC+  ++D+A  +   M     + P+   + +L+   C+ G + DA
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 351

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V+ L E+L    G  T+  I ++ L++ Y K G+  +A  +   M   N++ D  +YN L
Sbjct: 352 VRLLDEMLRL--GLKTNLFICNS-LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTL 408

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+C  G  S AF    +ML+ G  P V+TYNTLL  LC+ G  D+A   + ++ K GV
Sbjct: 409 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGV 468

Query: 363 APDQISYKTI-----------------------------------IQGLCIHGDIVKARE 387
           APD++ Y T+                                   I GLC  G +V+A E
Sbjct: 469 APDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE 528

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M +    P+   +  +IDGY +  ++  AF ++  M    +S ++  +N+LI    
Sbjct: 529 IFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLF 588

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +   + +   L  EM + G+ P++ TY  LI   C  G +  A   Y EM   G++ +II
Sbjct: 589 KSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANII 648

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE-SDKARDIHQK 566
             + ++ G    G + EA  +  K+   G   DH  F     RY  +++ +D   +  + 
Sbjct: 649 ICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKT 708

Query: 567 WLLRN 571
           +LL N
Sbjct: 709 FLLPN 713



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 231/494 (46%), Gaps = 39/494 (7%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           +C      R   +++ +L   G+  TA ++ ++MI+ G VPDV   + +VN  CK G ++
Sbjct: 184 KCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVD 243

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A   +++M  +   PN  TY++ I GY  + +++ A  +   M+  G+  N VT+ +L+
Sbjct: 244 EAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLI 303

Query: 231 HALCKK------------------------------------GLLGDAVKFLGEVLADDD 254
              CK+                                    G + DAV+ L E+L    
Sbjct: 304 KGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLR--L 361

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           G  T+  I ++ L++ Y K G+  +A  +   M   N++ D  +YN L++G+C  G  S 
Sbjct: 362 GLKTNLFICNS-LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           AF    +ML+ G  P V+TYNTLL  LC+ G  D+A   + ++ K GVAPD++ Y T++ 
Sbjct: 421 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLD 480

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           GL    +   A      +L +        +N +I G  + G +  A  I D M   G S 
Sbjct: 481 GLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP 540

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +  T+  LI    +  ++  AF +K  M  + I P +  YN LI        +     L 
Sbjct: 541 DGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL 600

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
            EM  RG+TP+I+TY  LI G C  G + +A   + ++   GL+ + I    +     R+
Sbjct: 601 TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL 660

Query: 555 KESDKARDIHQKWL 568
              D+A  + QK +
Sbjct: 661 GRIDEANLLMQKMV 674



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/523 (26%), Positives = 247/523 (47%), Gaps = 51/523 (9%)

Query: 80  EGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALW 139
           EG+    FN  D +L+E ++         P   T  T       +++ LC  G    AL 
Sbjct: 415 EGHTSEAFNLCDKMLQEGIE---------PTVLTYNT-------LLKGLCRVGAFDDALQ 458

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           +   M+++G  PD + ++ L++ L K+ + E A  + +++     + +  T+N  I+G C
Sbjct: 459 IWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLC 518

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           ++ ++ +A  +F  M + G  P+ +T+  L+   CK   +G A K  G   A +    + 
Sbjct: 519 KMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKG---AMEREPISP 575

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
            +     L+   FK+    +   L  +M  + +  +IV Y  LI+G+C  G +  AF+ +
Sbjct: 576 SIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSY 635

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF----------------------YGVL 357
            +M + G   ++I  +T+++ L + G++DEA+                        Y  +
Sbjct: 636 FEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAI 695

Query: 358 SK----------TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            K          T + P+ I Y   I GLC  G +  AR F   +  K  VP+   +  +
Sbjct: 696 QKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTL 755

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I GY   G++  AF +RD ML  G+  N+ T+NALI    +  ++  A  L  ++   G+
Sbjct: 756 IHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGL 815

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           FP+V TYN LI   C +G++  A +L D+M+  GI+P ++TY+ LI G C  G+++ + +
Sbjct: 816 FPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMK 875

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +  ++   G+    I +  L + Y R  E  K   ++    +R
Sbjct: 876 LLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIR 918



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 224/523 (42%), Gaps = 70/523 (13%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
            L  D R +  +I   C  GKI  A+ L  +M++ G   ++   N L+N  CK G++ +A
Sbjct: 327 ALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEA 386

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
           + VI  M +    P+  +YN  + GYCR     +A +L   M   GI P  +T+N L+  
Sbjct: 387 EGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKG 446

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LC+ G   DA++     L    G A  +V  ST L+D  FK  +   A  LW D+  +  
Sbjct: 447 LCRVGAFDDALQIWH--LMMKRGVAPDEVGYST-LLDGLFKMENFEGASTLWKDILARGF 503

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
               + +N +I+G C  G +  A   F +M   G  PD ITY TL++  CK   + +A  
Sbjct: 504 TKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFK 563

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
             G + +  ++P    Y ++I GL     +V+  + L  M  + + P    +  +IDG+ 
Sbjct: 564 VKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWC 623

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD-- 470
           + G L  AFS    M   G+S+N+   + ++    R G I +A  L ++M+  G FPD  
Sbjct: 624 KEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHE 683

Query: 471 ------------------------------VFTYNLLIGASCNLG--------------- 485
                                            YN+ I   C  G               
Sbjct: 684 CFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK 743

Query: 486 --------------------HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
                               ++  A +L DEMLRRG+ P+I+TY  LI G C   N+  A
Sbjct: 744 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA 803

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           + +F K+   GL  + + +  L   Y ++   D A  +  K +
Sbjct: 804 QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 196/403 (48%), Gaps = 4/403 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G    AL++   M + G +P + + N L+N L K G+   A +V ++M  +   P+    
Sbjct: 170 GLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMV 229

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  +  +C+  ++D+A      M N G+ PN VT++ L++       LGD     G +  
Sbjct: 230 SIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVS---LGDVEAAKGVLKF 286

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNG 310
             +   + +V+T T+L+  Y K     +A  +   M ++  +  D  AY VLI+G+C  G
Sbjct: 287 MSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTG 346

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            I  A     +ML+ G   ++   N+L+N  CK+G++ EA      +    + PD  SY 
Sbjct: 347 KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYN 406

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T++ G C  G   +A      ML++ + P    +N ++ G  R G   +A  I  LM+  
Sbjct: 407 TLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKR 466

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV+ +   ++ L+    +  +   A +L K++L  G      T+N +I   C +G +  A
Sbjct: 467 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            +++D+M   G +PD ITY  LI G+C   N+ +A +V   ++
Sbjct: 527 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 569



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 183/403 (45%), Gaps = 52/403 (12%)

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLA----DDDGKATSDVITST---------- 265
           RPN  ++  LVH L +  +  +   +L +++      D G    D +             
Sbjct: 99  RPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTV 158

Query: 266 --ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             +++  Y + G    AL ++++M +      + + N L+N    NG+  +A   + QM+
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           + G +PDV   + ++N  CK GK+DEA+ F   +   GV P+ ++Y ++I G    GD+ 
Sbjct: 219 RVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVE 278

Query: 384 KAREFLLSMLEKSV------------------------------------VPEPHIWNVI 407
            A+  L  M EK V                                    VP+   + V+
Sbjct: 279 AAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVL 338

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           IDGY R G + +A  + D ML  G+ +N+F  N+LI    + G I +A  +   M+   +
Sbjct: 339 IDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNL 398

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PD ++YN L+   C  GH   A  L D+ML+ GI P ++TY  L+KG C  G   +A +
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           ++  +   G+A D + +  L     +M+  + A  + +  L R
Sbjct: 459 IWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILAR 501



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 97/179 (54%), Gaps = 3/179 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I      G +  A  LR +M+++G VP+++T+N L+N LCK  ++++A  +  ++ 
Sbjct: 752 YCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLH 811

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  TYN  I GYC++  +D A  L   M   GI P+ VT++ L++ LCK G + 
Sbjct: 812 QKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIE 871

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            ++K L +++        S +I    L+  Y ++G+  +   L++ M  + + T  +++
Sbjct: 872 RSMKLLNQMIK---AGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISH 927


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 202/430 (46%), Gaps = 47/430 (10%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL    +++  G  P+V T N L+N LCK G ++ A  +  E+ +    P   ++N  I 
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           GYC+   L++   L   M    + P+  T++ L+  LCK+  L DA     E+   D G 
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMC--DRGL 333

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
             +DV T T L++   KNG    AL ++  MF K ++ D+V YN LI+G C  G    A 
Sbjct: 334 VPNDV-TFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREAR 392

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            +  +M KRG +PD  TY TLL+  CK+G L+ A      + K G+  D +++  II GL
Sbjct: 393 KFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGL 452

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G IV A   L  ML   + P+   + +++DG+ + GD+   F               
Sbjct: 453 CRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFK-------------- 498

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
                                L KEM  DG  P V TYN+L+   C  G +  A  L + 
Sbjct: 499 ---------------------LLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNA 537

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           ML  G+ PD ITY  L++GHC  G + + + V  +   +GL  D+  +R L      + E
Sbjct: 538 MLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTE---MGLVSDYASYRSL------LHE 588

Query: 557 SDKARDIHQK 566
             KA    QK
Sbjct: 589 LSKASKDRQK 598



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 182/391 (46%), Gaps = 41/391 (10%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC  GK+  A  +  ++ + G  P  ++ N L+N  CK G+LE+   +   M E 
Sbjct: 237 VLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEF 296

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R  P+  TY+A I G C+  +L+ A HLF  M + G+ PN VT   L++  C        
Sbjct: 297 RVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQC-------- 348

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                         KNG    AL ++  MF K ++ D+V YN L
Sbjct: 349 ------------------------------KNGRVDLALEIYQQMFTKGLKADLVLYNTL 378

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C  G    A  +  +M KRG +PD  TY TLL+  CK+G L+ A      + K G+
Sbjct: 379 IDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGI 438

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D +++  II GLC  G IV A   L  ML   + P+   + +++DG+ + GD+   F 
Sbjct: 439 QLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFK 498

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M S G    V T+N L+    + G + +A  L   ML  G+ PD  TYN+L+   C
Sbjct: 499 LLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHC 558

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELI 513
             G +     +  EM   G+  D  +Y  L+
Sbjct: 559 KHGKLGDFQNVKTEM---GLVSDYASYRSLL 586



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 132/274 (48%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L++   K      AL  + ++       ++  +NVL+N  C  G +  A   F ++ K G
Sbjct: 203 LLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTG 262

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P  +++NTL+N  CK G L+E      V+ +  V PD  +Y  +I GLC    +  A 
Sbjct: 263 LQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDAN 322

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
                M ++ +VP    +  +I+G  + G +  A  I   M + G+ +++  +N LI   
Sbjct: 323 HLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGL 382

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            +GG   +A     EM   G+ PD FTY  L+  SC  G + LAL++  EM++ GI  D 
Sbjct: 383 CKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDN 442

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           + +T +I G C  G + +AE    ++   GL  D
Sbjct: 443 VAFTAIISGLCRDGKIVDAERTLREMLRAGLKPD 476



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 129/266 (48%), Gaps = 3/266 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + A+I  LC   ++  A  L ++M  +G VP+ +T   L+N  CK G ++ A  + 
Sbjct: 301 DVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIY 360

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           ++M       +   YN  I G C+     +A      M   G+ P++ T+  L+   CK+
Sbjct: 361 QQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKE 420

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A++   E++ +       D +  T ++    ++G    A     +M +  ++ D 
Sbjct: 421 GDLELALEMRKEMVKEG---IQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDD 477

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y ++++GFC  GD+   F    +M   G +P VITYN L+N LCKQG++  A      
Sbjct: 478 GTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNA 537

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDI 382
           +   GV PD I+Y  ++QG C HG +
Sbjct: 538 MLNLGVVPDDITYNILLQGHCKHGKL 563



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 145/328 (44%), Gaps = 38/328 (11%)

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
           R N+   ++L   + +KG  G A      +L      ++S V  +  LM  Y + G    
Sbjct: 124 RMNQQAESLLHFVVSRKGK-GSASSVFASILETKGTLSSSFVFDA--LMSVYTEFGYVSD 180

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A+  +    + N++        L+           A  ++ ++L  G+ P+V T+N L+N
Sbjct: 181 AIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMN 240

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LCK+GK+ +A   +  + KTG+ P  +S+                              
Sbjct: 241 RLCKEGKVKDAQLIFDEIRKTGLQPTAVSF------------------------------ 270

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
                N +I+GY + G+L   F ++ +M  F V  +VFT++ALI    +   + DA  L 
Sbjct: 271 -----NTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLF 325

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           KEM   G+ P+  T+  LI   C  G + LAL++Y +M  +G+  D++ Y  LI G C  
Sbjct: 326 KEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKG 385

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           G  +EA +   ++   GL  D   +  L
Sbjct: 386 GYFREARKFVGEMTKRGLIPDKFTYTTL 413



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 6/233 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  +I  LC GG    A     +M ++G +PD  T+  L++  CK GDLE A 
Sbjct: 368 LKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELAL 427

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + +EM +     +   + A I+G CR  ++  A      M   G++P+  T+ +++   
Sbjct: 428 EMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGF 487

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CKKG +    K L E+ +D        VIT  +LM+   K G    A  L N M    + 
Sbjct: 488 CKKGDVKMGFKLLKEMQSDGH---IPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVV 544

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
            D + YN+L+ G C +G +        +M   G + D  +Y +LL+ L K  K
Sbjct: 545 PDDITYNILLQGHCKHGKLGDFQNVKTEM---GLVSDYASYRSLLHELSKASK 594



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 71/138 (51%), Gaps = 5/138 (3%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           +D  +T+R+   +R  L+ D   +  V+   C  G +     L ++M   G +P V+T+N
Sbjct: 459 VDAERTLREM--LRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYN 516

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            L+N LCK G ++ AD ++  M  +   P+  TYN  + G+C+  +L    ++ + M   
Sbjct: 517 VLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM--- 573

Query: 218 GIRPNRVTHNILVHALCK 235
           G+  +  ++  L+H L K
Sbjct: 574 GLVSDYASYRSLLHELSK 591



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 8/140 (5%)

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA---FSLKKEMLLDGIFPDV 471
           G  S+ F+   ++ + G  S+ F F+AL+   T  G + DA   F L K+  L   F   
Sbjct: 143 GSASSVFA--SILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGC 200

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
                L+     +    +AL+ Y E+L  G  P++ T+  L+   C  G +K+A+ +F +
Sbjct: 201 ---KCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDE 257

Query: 532 IQTLGLAIDHIPFRILKKRY 551
           I+  GL    + F  L   Y
Sbjct: 258 IRKTGLQPTAVSFNTLINGY 277


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 154/495 (31%), Positives = 228/495 (46%), Gaps = 73/495 (14%)

Query: 98  LDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           +D L  MR +G  P R    T       VI  LC  G+   A  L  KM + G  PD++T
Sbjct: 208 IDLLDEMRSSGALPNRVAYNT-------VISSLCGEGQTVEAEKLVEKMREVGLSPDIVT 260

Query: 156 HNYLVNELCKIGDLEKADHVIREM---SEMR-PSPNCATYNAFITGYCRVNELDKALHLF 211
            N  +  LCK G + +A  + R+M    EM  P PN  TYN  + G+C     ++A  +F
Sbjct: 261 FNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIF 320

Query: 212 STMANN----------------------------------GIRPNRVTHNILVHALCKKG 237
            +M N+                                   I+PN  ++NILVH LCK G
Sbjct: 321 DSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYG 380

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
           +  DA   LG  L  + G A  D +T + L+  Y + G   +A  +  +M Q     ++ 
Sbjct: 381 MFSDARSILG--LMRESGVAP-DTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMY 437

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
             N+L++     G  S A      M +RG+  D +T NT++N LCK G LD+A      +
Sbjct: 438 TCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM 497

Query: 358 SKTGVA-----------------------PDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
              G A                       PD I+Y TII GLC  G + +A++ LL M+ 
Sbjct: 498 WTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIG 557

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K + P+  I++  I  Y + G LS+AF +   M   G + ++ T+N+LI        IF+
Sbjct: 558 KKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFE 617

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
            + L  EM   GIFP+V+TYN +I      G +  A  L DEML++GI+P+I T+  LI 
Sbjct: 618 IYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIG 677

Query: 515 GHCARGNMKEAEEVF 529
                 +   A+E+F
Sbjct: 678 AFFKACDFGAAQELF 692



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/519 (23%), Positives = 221/519 (42%), Gaps = 90/519 (17%)

Query: 91  DLILKEN-LDRLKTMRDTGP------------VRCTLETDYRRHVAVIRDLCLGGKIGTA 137
           DL L EN + + +++RD  P             RC+L+                 ++   
Sbjct: 93  DLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKES---------------RVDCV 137

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
           +WL + M      P   T N L++ LC++G LE A  V  +MSE    PN  +    + G
Sbjct: 138 IWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRG 197

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL----------- 246
           YCR       + L   M ++G  PNRV +N ++ +LC +G   +A K +           
Sbjct: 198 YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPD 257

Query: 247 --------------GEVLA-----------DDDGKATSDVITSTILMDSYFKNGDKFQAL 281
                         G++L            ++ G    + +T  ++++ +   G   +A 
Sbjct: 258 IVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEAR 317

Query: 282 ALWNDMFQKNIQT-DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           A+++ M  KN +T  + +YN+ + G   +G +  A     +M ++   P++ +YN L++ 
Sbjct: 318 AIFDSM--KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHG 375

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           LCK G   +A    G++ ++GVAPD ++Y T++ G C  G I++A   L  M++    P 
Sbjct: 376 LCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPN 435

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
            +  N+++    + G  S A  +  +M   G   +  T N +I    + G++  A  +  
Sbjct: 436 MYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVS 495

Query: 461 EMLLDG-----------------------IFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            M   G                         PD  TY  +IG  C +G +  A +   EM
Sbjct: 496 GMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEM 555

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           + + ++PD + +   I  +C +G +  A  V  +++  G
Sbjct: 556 IGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKG 594



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 179/424 (42%), Gaps = 22/424 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  G    A  +   M + G  PD +T++ L++  C+ G + +A++V+REM ++ 
Sbjct: 372 LVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVG 431

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T N  +    +     +A  L   M   G   + VT N +++ LCK G L  A+
Sbjct: 432 CFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAI 491

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + +  +       +  ++  S I +     NG              K    D + Y  +I
Sbjct: 492 EIVSGMWTRGSA-SLGNLGNSFIDLFDIRNNG--------------KKCLPDSITYATII 536

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C  G +  A     +M+ +   PD + ++T +   CKQGKL  A      + K G  
Sbjct: 537 GGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCN 596

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
               +Y ++IQGL     I +    +  M E+ + P  + +N II      G L +A  +
Sbjct: 597 KSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCL 656

Query: 424 RDLMLSFGVSSNVFTFNALILAETRG---GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
            D ML  G+S N++TF  LI A  +    G+  + F +   +         F +N L+  
Sbjct: 657 LDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAG 716

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
               G    A +L++  L R +      Y +LI+  C  G + +A  +  K+     + D
Sbjct: 717 ----GETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFD 772

Query: 541 HIPF 544
              F
Sbjct: 773 PASF 776



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 117/274 (42%), Gaps = 4/274 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  G++  A     +MI K   PD L  +  +   CK G L  A  V++EM 
Sbjct: 532 YATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEME 591

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   + +  TYN+ I G    N++ +   L   M   GI PN  T+N ++  L + G L 
Sbjct: 592 KKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLK 651

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA   L E+L       + ++ T  IL+ ++FK  D   A  L+          + + Y+
Sbjct: 652 DATCLLDEMLQKG---ISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESL-YS 707

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            + N     G+   A   F   L R        Y  L+  LCK GKLD+AS     +   
Sbjct: 708 FMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDK 767

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
             + D  S+  +I  L   G    A EF   M+E
Sbjct: 768 QYSFDPASFMPVIDELGKRGSKHAADEFAERMME 801



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 49/87 (56%)

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L K+M +  + P  +T+NLLI A C +G++  A +++D+M  +G  P+  +   L++G+C
Sbjct: 140 LYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYC 199

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPF 544
             G      ++  ++++ G   + + +
Sbjct: 200 RAGLHSHGIDLLDEMRSSGALPNRVAY 226


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 206/430 (47%), Gaps = 38/430 (8%)

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           I  A ++  +M++      ++T N ++N LC+ G  +KA   I  M      PN  TYN 
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNT 257

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            I GYC   + + A  +F TM +  ++P+  T+N  +  LCK+  + +A   L ++L   
Sbjct: 258 VINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLL--- 314

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
                                              +  +  + V YN LI+G C  GD+ 
Sbjct: 315 -----------------------------------ESGLVPNAVTYNALIDGCCNKGDLD 339

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            AFAY  +M+ RG +  V TYN L++ L  + +++EA      + + GV PD ++Y   I
Sbjct: 340 KAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQI 399

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            G C  G+  KA      M+EK++ P    +  +ID +G+   +S A       +  G+ 
Sbjct: 400 NGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGML 459

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            ++  FNALI      G+I  AF L KEM    + PD  T+N L+   C    +  A +L
Sbjct: 460 PDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKL 519

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
            DEM  RGI PD I+Y  LI G+  RG+MK+A EVF ++ +LG     + +  L + Y +
Sbjct: 520 LDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSK 579

Query: 554 MKESDKARDI 563
           + E+D A ++
Sbjct: 580 IGEADHAEEL 589



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 200/392 (51%), Gaps = 3/392 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  GK   A      M   G  P+V+T+N ++N  C  G  E A  + + M +  
Sbjct: 223 MINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKN 282

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+C TYN+FI+  C+   +++A  +   +  +G+ PN VT+N L+   C KG L  A 
Sbjct: 283 LKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAF 342

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            +  E++   +    + V T  +L+ + F      +A  +  +M +K ++ D+V YN+ I
Sbjct: 343 AYRDEMM---NRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQI 399

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG+C  G+   A + F +M+++   P V TY +L++   K+ ++ EA   +    K G+ 
Sbjct: 400 NGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGML 459

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD I +  +I G C++G+I +A + L  M    VVP+   +N ++ GY R   +  A  +
Sbjct: 460 PDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKL 519

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M   G+  +  ++N LI   ++ G + DA  +  EML  G  P + TYN LI     
Sbjct: 520 LDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSK 579

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           +G    A +L  EM  +GITPD  TY  +I+ 
Sbjct: 580 IGEADHAEELLREMQSKGITPDDSTYLYVIEA 611



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 135/294 (45%), Gaps = 3/294 (1%)

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
           F  L+L  +    N++T +V +++L++ +C       A      M +   +P   T N+L
Sbjct: 132 FNELSLARNRL--NVKTTLV-FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSL 188

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           L+ L K  K+  A   Y  + K  +    +++  +I  LC  G   KA++F+  M    V
Sbjct: 189 LSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGV 248

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P    +N +I+GY   G    A  I   M    +  + +T+N+ I    +   I +A  
Sbjct: 249 KPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASG 308

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           +  ++L  G+ P+  TYN LI   CN G +  A    DEM+ RGI   + TY  LI    
Sbjct: 309 VLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALF 368

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
               ++EAE++  +++  G+  D + + I    Y R   + KA  +  + + +N
Sbjct: 369 LEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKN 422


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 229/474 (48%), Gaps = 8/474 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E  D L   RD   V+ ++  D      ++R  C   +   A      M +KG VP + 
Sbjct: 139 RELFDELTLSRDRLSVKSSIVFDL-----LVRVCCELRRADEAFKCFYMMKEKGIVPKIE 193

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T N +++   K+  +E A  +  EM  +R S    T+N  +   C+  +L KA      M
Sbjct: 194 TCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFM 253

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G +PN V++N ++H    +G +  A + L  +          D  T   L+    K 
Sbjct: 254 EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG---IEPDSYTYGSLISGMCKE 310

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +A  L++ M +  +  + V YN LI+G+C  GD+  AF+Y  +M+K+G +P V TY
Sbjct: 311 GRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTY 370

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N L++ L  +G++ EA      + K G+ PD I+Y  +I G    G+  KA +    ML 
Sbjct: 371 NLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLS 430

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K + P    +  +I    R   +  A  + + +L  GVS +V  FNA++      G++  
Sbjct: 431 KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVER 490

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           AF L KEM    + PD  T+N L+   C  G +  A  L DEM RRGI PD I+Y  LI 
Sbjct: 491 AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLIS 550

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+  RG++K+A  V  ++ ++G     + +  L K   + +E D A ++ ++ +
Sbjct: 551 GYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV 604



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 196/388 (50%), Gaps = 3/388 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  GK+  A      M   G  P+V+++N +++     G++E A  ++  M      P+
Sbjct: 237 LCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPD 296

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY + I+G C+   L++A  LF  M   G+ PN VT+N L+   C KG L  A  +  
Sbjct: 297 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 356

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E++          V T  +L+ + F  G   +A  +  +M +K I  D + YN+LING+ 
Sbjct: 357 EMVKKG---IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYS 413

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G+   AF    +ML +G  P  +TY +L+  L ++ ++ EA   +  +   GV+PD I
Sbjct: 414 RCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI 473

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            +  ++ G C +G++ +A   L  M  KSV P+   +N ++ G  R G +  A  + D M
Sbjct: 474 MFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 533

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              G+  +  ++N LI    R G I DAF ++ EML  G  P + TYN LI   C     
Sbjct: 534 KRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEG 593

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKG 515
            LA +L  EM+ +GI+PD  TY  LI+G
Sbjct: 594 DLAEELLKEMVNKGISPDDSTYLSLIEG 621



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 186/355 (52%), Gaps = 7/355 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I  A  +   M  KG  PD  T+  L++ +CK G LE+A  +  +M E+   PN  TY
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYC   +L++A      M   GI P+  T+N+LVHAL  +G +G+A   + E+  
Sbjct: 336 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 395

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   D IT  IL++ Y + G+  +A  L N+M  K I+   V Y  LI        
Sbjct: 396 KG---IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 452

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F ++L +G  PDVI +N +++  C  G ++ A      + +  V PD++++ T
Sbjct: 453 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 512

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++QG C  G + +AR  L  M  + + P+   +N +I GYGR GD+ +AF +RD MLS G
Sbjct: 513 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 572

Query: 432 VSSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
            +  + T+NALI  L + + G +  A  L KEM+  GI PD  TY  LI    N+
Sbjct: 573 FNPTLLTYNALIKCLCKNQEGDL--AEELLKEMVNKGISPDDSTYLSLIEGMGNV 625



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 196/408 (48%), Gaps = 3/408 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           ++  A  L  +M +      V T N +VN LCK G L+KA   I  M  +   PN  +YN
Sbjct: 207 RMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYN 266

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I GY     ++ A  +   M   GI P+  T+  L+  +CK+G L +A     +++  
Sbjct: 267 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV-- 324

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
            +     + +T   L+D Y   GD  +A +  ++M +K I   +  YN+L++   + G +
Sbjct: 325 -EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRM 383

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A     +M K+G +PD ITYN L+N   + G   +A   +  +   G+ P  ++Y ++
Sbjct: 384 GEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSL 443

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I  L     + +A +    +L++ V P+  ++N ++DG+   G++  AF +   M    V
Sbjct: 444 IYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSV 503

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +  TFN L+    R G + +A  L  EM   GI PD  +YN LI      G I  A +
Sbjct: 504 PPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFR 563

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           + DEML  G  P ++TY  LIK  C       AEE+  ++   G++ D
Sbjct: 564 VRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 611



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 148/290 (51%), Gaps = 3/290 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G +  A   R +M++KG +P V T+N LV+ L   G + +AD +I+EM + 
Sbjct: 337 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 396

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  I GY R     KA  L + M + GI P  VT+  L++ L ++  + +A
Sbjct: 397 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 456

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                ++L   D   + DVI    ++D +  NG+  +A  L  +M +K++  D V +N L
Sbjct: 457 DDLFEKIL---DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 513

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + G C  G +  A     +M +RG  PD I+YNTL++   ++G + +A      +   G 
Sbjct: 514 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 573

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            P  ++Y  +I+ LC + +   A E L  M+ K + P+   +  +I+G G
Sbjct: 574 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 623



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 145/295 (49%), Gaps = 3/295 (1%)

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           N + F  L L  D    ++++ IV +++L+   C       AF  F  M ++G +P + T
Sbjct: 138 NRELFDELTLSRDRL--SVKSSIV-FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIET 194

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
            N +L+   K  +++ A   Y  + +  ++    ++  ++  LC  G + KAREF+  M 
Sbjct: 195 CNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFME 254

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
                P    +N II GY   G++  A  I D M   G+  + +T+ +LI    + G + 
Sbjct: 255 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 314

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L  +M+  G+ P+  TYN LI   CN G +  A    DEM+++GI P + TY  L+
Sbjct: 315 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 374

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
                 G M EA+++  +++  G+  D I + IL   Y R   + KA D+H + L
Sbjct: 375 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEML 429


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 209/426 (49%), Gaps = 3/426 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D      +I+ LCL G+IG AL L  KMI +G  PDV+ +  L+N LCK G    A  
Sbjct: 141 QPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIR 200

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++R M +    P+   Y   I   C+  +  +A +LFS M   GI PN VT N LV+ALC
Sbjct: 201 LLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALC 260

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G        L E++   D K   + I+ T ++D+  K G   QA  + + MFQ  ++ 
Sbjct: 261 NLGEWKHVNTLLNEMV---DSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEP 317

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D+V Y  LI+G CL  ++  A   F  M+ +G  P+V +YNTL+N  CK  ++D+A + +
Sbjct: 318 DVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLF 377

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + +  + P+ ++Y T+I GLC  G +  A      M+    +P+   + +++D   + 
Sbjct: 378 EEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKN 437

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
             L  A ++   +    +  ++  +  +I    R G + DA  L   +   G+ P+V+TY
Sbjct: 438 CHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTY 497

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N++    C  G +  A +L+ EM     + D  TY  + +G         A ++  ++  
Sbjct: 498 NIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLA 557

Query: 535 LGLAID 540
            G + D
Sbjct: 558 RGFSCD 563



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 207/415 (49%), Gaps = 3/415 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           +  T L L RKM   G   +V T N L+N  C +  +  A  V+ ++ ++   P+ A++ 
Sbjct: 89  RYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFT 148

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I G C   ++ +ALHLF  M   G +P+ V +  L++ LCK G    A++ L  +   
Sbjct: 149 TLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSM--- 205

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
           + G    DV+    L+ S  K+  + QA  L+++M  K I  +IV  N L+   C  G+ 
Sbjct: 206 EKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEW 265

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
                   +M+    +P+ I+  T+++ LCK+G + +A     ++ ++GV PD ++Y  +
Sbjct: 266 KHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTAL 325

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I G C+  ++ +A +    M+ K   P    +N +I+GY +   +  A  + + M    +
Sbjct: 326 IDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKL 385

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             N  T+N LI      G + DA +L +EM+  G  PD+ TY +L+   C   H+  A+ 
Sbjct: 386 IPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMA 445

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           L   +    + PDI  YT +I G C  G +++A ++F+ + + GL  +   + I+
Sbjct: 446 LLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIM 500



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 187/407 (45%), Gaps = 3/407 (0%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           L HN   ++      L+ A      M  M P P+   +   +T   +V      L L   
Sbjct: 40  LLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRK 99

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M + GI  N  T N+L+++ C    +  A   L ++L         D  + T L+     
Sbjct: 100 MDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILK---LGCQPDTASFTTLIKGLCL 156

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +AL L++ M  +  Q D+V Y  LING C  G  S+A      M K    PDV+ 
Sbjct: 157 EGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVV 216

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y TL++ LCK  +  +A + +  +   G++P+ ++  +++  LC  G+       L  M+
Sbjct: 217 YGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMV 276

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           +  ++P       ++D   + G ++ A  + D+M   GV  +V T+ ALI        + 
Sbjct: 277 DSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMD 336

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  +   M+  G  P+VF+YN LI   C +  +  A+ L++EM R+ + P+ +TY  LI
Sbjct: 337 EAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLI 396

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            G C  G +++A  +F ++   G   D + +RIL     +    DKA
Sbjct: 397 HGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKA 443



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 162/370 (43%), Gaps = 51/370 (13%)

Query: 76  DSDNEGNPQAVFNALDLILKENL-----DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCL 130
           DS    N  ++   +D + KE +     D +  M  +G     +E D   + A+I   CL
Sbjct: 277 DSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSG-----VEPDVVTYTALIDGHCL 331

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
             ++  A+ +   M+ KG  P+V ++N L+N  CKI  ++KA ++  EM   +  PN  T
Sbjct: 332 RSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVT 391

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I G C V  L  A+ LF  M   G  P+ VT+ IL+  LCK   L           
Sbjct: 392 YNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHL----------- 440

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                                    DK  A+AL   +   N+  DI  Y ++I+G C  G
Sbjct: 441 -------------------------DK--AMALLKAIEGSNLDPDIQIYTIVIDGMCRAG 473

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           ++  A   F  +  +G  P+V TYN + + LCK+G LDEA+  +  + +   + D  +Y 
Sbjct: 474 ELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYN 533

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG-DLSNAFSIRDLM-- 427
           TI QG   + +  +A + L  ML +    +     +++      G D S A  + D+   
Sbjct: 534 TITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPH 593

Query: 428 LSFGVSSNVF 437
           L   V   VF
Sbjct: 594 LRIQVKDTVF 603


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 204/394 (51%), Gaps = 9/394 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC  GK   AL L R+M +    P+ +T+N ++   C  G ++ A  V+REM E  
Sbjct: 122 MLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERG 177

Query: 184 P-SPNCATYNAFITGYCRVNELDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGD 241
             +P+  TY   I+G+C++  ++ A+ +F  M   G + P+ V +N L+   C  G L  
Sbjct: 178 GIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDV 237

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+++  +++    G A + V T  +LM + F +     A A+  +M +     D+  YN+
Sbjct: 238 ALQYREDMV--QRGIAMT-VATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNI 294

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LING+C  G+   A   F +M ++G     +TY +L+    ++G++ E    + V  K G
Sbjct: 295 LINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKG 354

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD + Y  +I   C  GD+ +A E +  M +K + P+   +N ++ G+   G L  A 
Sbjct: 355 IRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEAR 414

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           ++ D M   G+  ++ ++N LI   +  G I DA  ++ EM+  G  P + TYN LI   
Sbjct: 415 TLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGL 474

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           C +     A  L  EM+ +GITPD  TY  LI+G
Sbjct: 475 CKIRQGDDAENLMKEMVAKGITPDDSTYISLIEG 508



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 186/387 (48%), Gaps = 8/387 (2%)

Query: 186 PNCAT-YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           P C T +N  +   C   +  +AL L   M     RPN VT+N ++   C +G +  A++
Sbjct: 113 PLCTTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALE 168

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLI 303
            + E+   + G    D  T   L+  + K G    A+ ++++M  K  +    V YN LI
Sbjct: 169 VMREM--RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALI 226

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G+C  G +  A  Y   M++RG    V TYN L++ L    +  +A      + K G +
Sbjct: 227 GGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFS 286

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y  +I G C  G+  KA E    M +K V      +  +I  + R G +     +
Sbjct: 287 PDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRL 346

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            ++ +  G+  +V  +NALI +   GG +  A+ +  EM    I PD  TYN L+   C 
Sbjct: 347 FNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCL 406

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           LG +  A  L DEM +RGI PD+++Y  LI G+  +G++K+A  V  ++   G     + 
Sbjct: 407 LGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMT 466

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           +  L +   ++++ D A ++ ++ + +
Sbjct: 467 YNALIQGLCKIRQGDDAENLMKEMVAK 493



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 149/321 (46%), Gaps = 38/321 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  GK+  AL  R  M+Q+G    V T+N L++ L        A  V+ EM + 
Sbjct: 224 ALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKN 283

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SP+  TYN  I GYC+     KAL +F  M+  G+R   VT+  L++   +KG + + 
Sbjct: 284 GFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQET 343

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +                                      L+N   +K I+ D+V YN L
Sbjct: 344 DR--------------------------------------LFNVAVKKGIRPDVVMYNAL 365

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           IN  C  GD+  A+    +M K+   PD +TYNTL+   C  G+LDEA      ++K G+
Sbjct: 366 INSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGI 425

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD +SY T+I G  + GDI  A      M++K   P    +N +I G  +     +A +
Sbjct: 426 QPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAEN 485

Query: 423 IRDLMLSFGVSSNVFTFNALI 443
           +   M++ G++ +  T+ +LI
Sbjct: 486 LMKEMVAKGITPDDSTYISLI 506



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 132/249 (53%), Gaps = 3/249 (1%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           L +  +   A  +  +M + G  PDV T+N L+N  CK G+ +KA  V  EMS+      
Sbjct: 264 LFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRAT 323

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY + I  + R  ++ +   LF+     GIRP+ V +N L+++ C  G +  A + + 
Sbjct: 324 AVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMA 383

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E+   +  +   D +T   LM  +   G   +A  L ++M ++ IQ D+V+YN LI+G+ 
Sbjct: 384 EM---EKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYS 440

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
           + GDI  A     +M+ +GF P ++TYN L+  LCK  + D+A +    +   G+ PD  
Sbjct: 441 MKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDS 500

Query: 368 SYKTIIQGL 376
           +Y ++I+GL
Sbjct: 501 TYISLIEGL 509



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 134/319 (42%), Gaps = 68/319 (21%)

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT------------ 360
           + AFA F  + +        T+N +L  LC  GK   A      + +             
Sbjct: 98  APAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPRPNAVTYNTVIAGF 157

Query: 361 --------------------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVP 399
                               G+APD+ +Y T+I G C  G +  A +    ML K  V P
Sbjct: 158 CARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAP 217

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
              ++N +I GY   G L  A   R+ M+  G++  V T+N L+ A        DA+++ 
Sbjct: 218 SAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVL 277

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM---------------------- 497
           +EM  +G  PDVFTYN+LI   C  G+   AL++++EM                      
Sbjct: 278 EEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRK 337

Query: 498 -------------LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
                        +++GI PD++ Y  LI  HC  G+M+ A E+ A+++   +  D + +
Sbjct: 338 GQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTY 397

Query: 545 RILKKRYRRMKESDKARDI 563
             L + +  +   D+AR +
Sbjct: 398 NTLMRGFCLLGRLDEARTL 416



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 73/142 (51%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V+  +  D   + A+I   C GG +  A  +  +M +K   PD +T+N L+   C +G L
Sbjct: 351 VKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRL 410

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  +I EM++    P+  +YN  I+GY    ++  AL +   M + G  P  +T+N L
Sbjct: 411 DEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNAL 470

Query: 230 VHALCKKGLLGDAVKFLGEVLA 251
           +  LCK     DA   + E++A
Sbjct: 471 IQGLCKIRQGDDAENLMKEMVA 492



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 60/110 (54%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R  CL G++  A  L  +M ++G  PD++++N L++     GD++ A  V  EM +  
Sbjct: 400 LMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKG 459

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +P   TYNA I G C++ + D A +L   M   GI P+  T+  L+  L
Sbjct: 460 FNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 1/106 (0%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           LD  +T+ D    R  ++ D   +  +I    + G I  AL +R +M+ KG  P ++T+N
Sbjct: 410 LDEARTLIDEMTKR-GIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYN 468

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
            L+  LCKI   + A+++++EM     +P+ +TY + I G    +E
Sbjct: 469 ALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 154/495 (31%), Positives = 228/495 (46%), Gaps = 73/495 (14%)

Query: 98  LDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           +D L  MR +G  P R    T       VI  LC  G+   A  L  KM + G  PD++T
Sbjct: 208 IDLLDEMRSSGALPNRVAYNT-------VISSLCGEGQTVEAEKLVEKMREVGLSPDIVT 260

Query: 156 HNYLVNELCKIGDLEKADHVIREM---SEMR-PSPNCATYNAFITGYCRVNELDKALHLF 211
            N  +  LCK G + +A  + R+M    EM  P PN  TYN  + G+C     ++A  +F
Sbjct: 261 FNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIF 320

Query: 212 STMANN----------------------------------GIRPNRVTHNILVHALCKKG 237
            +M N+                                   I+PN  ++NILVH LCK G
Sbjct: 321 DSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYG 380

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
           +  DA   LG  L  + G A  D +T + L+  Y + G   +A  +  +M Q     ++ 
Sbjct: 381 MFSDARSILG--LMRESGVAP-DTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMY 437

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
             N+L++     G  S A      M +RG+  D +T NT++N LCK G LD+A      +
Sbjct: 438 TCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM 497

Query: 358 SKTGVA-----------------------PDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
              G A                       PD I+Y TII GLC  G + +A++ LL M+ 
Sbjct: 498 WTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIG 557

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K + P+  I++  I  Y + G LS+AF +   M   G + ++ T+N+LI        IF+
Sbjct: 558 KKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFE 617

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
            + L  EM   GIFP+V+TYN +I      G +  A  L DEML++GI+P+I T+  LI 
Sbjct: 618 IYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIG 677

Query: 515 GHCARGNMKEAEEVF 529
                 +   A+E+F
Sbjct: 678 AFFKACDFGAAQELF 692



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/519 (23%), Positives = 221/519 (42%), Gaps = 90/519 (17%)

Query: 91  DLILKEN-LDRLKTMRDTGP------------VRCTLETDYRRHVAVIRDLCLGGKIGTA 137
           DL L EN + + +++RD  P             RC+L+                 ++   
Sbjct: 93  DLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKES---------------RVDCV 137

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
           +WL + M      P   T N L++ LC++G LE A  V  +MSE    PN  +    + G
Sbjct: 138 IWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRG 197

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL----------- 246
           YCR       + L   M ++G  PNRV +N ++ +LC +G   +A K +           
Sbjct: 198 YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPD 257

Query: 247 --------------GEVLA-----------DDDGKATSDVITSTILMDSYFKNGDKFQAL 281
                         G++L            ++ G    + +T  ++++ +   G   +A 
Sbjct: 258 IVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEAR 317

Query: 282 ALWNDMFQKNIQT-DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           A+++ M  KN +T  + +YN+ + G   +G +  A     +M ++   P++ +YN L++ 
Sbjct: 318 AIFDSM--KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHG 375

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           LCK G   +A    G++ ++GVAPD ++Y T++ G C  G I++A   L  M++    P 
Sbjct: 376 LCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPN 435

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
            +  N+++    + G  S A  +  +M   G   +  T N +I    + G++  A  +  
Sbjct: 436 MYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVS 495

Query: 461 EMLLDG-----------------------IFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            M   G                         PD  TY  +IG  C +G +  A +   EM
Sbjct: 496 GMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEM 555

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           + + ++PD + +   I  +C +G +  A  V  +++  G
Sbjct: 556 IGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKG 594



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 179/424 (42%), Gaps = 22/424 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  G    A  +   M + G  PD +T++ L++  C+ G + +A++V+REM ++ 
Sbjct: 372 LVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVG 431

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T N  +    +     +A  L   M   G   + VT N +++ LCK G L  A+
Sbjct: 432 CFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAI 491

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + +  +       +  ++  S I +     NG              K    D + Y  +I
Sbjct: 492 EIVSGMWTRGSA-SLGNLGNSFIDLFDIRNNG--------------KKCLPDSITYATII 536

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C  G +  A     +M+ +   PD + ++T +   CKQGKL  A      + K G  
Sbjct: 537 GGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCN 596

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
               +Y ++IQGL     I +    +  M E+ + P  + +N II      G L +A  +
Sbjct: 597 KSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCL 656

Query: 424 RDLMLSFGVSSNVFTFNALILAETRG---GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
            D ML  G+S N++TF  LI A  +    G+  + F +   +         F +N L+  
Sbjct: 657 LDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAG 716

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
               G    A +L++  L R +      Y +LI+  C  G + +A  +  K+     + D
Sbjct: 717 ----GETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFD 772

Query: 541 HIPF 544
              F
Sbjct: 773 PASF 776



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 117/274 (42%), Gaps = 4/274 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  G++  A     +MI K   PD L  +  +   CK G L  A  V++EM 
Sbjct: 532 YATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEME 591

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   + +  TYN+ I G    N++ +   L   M   GI PN  T+N ++  L + G L 
Sbjct: 592 KKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLK 651

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA   L E+L       + ++ T  IL+ ++FK  D   A  L+          + + Y+
Sbjct: 652 DATCLLDEMLQKG---ISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESL-YS 707

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            + N     G+   A   F   L R        Y  L+  LCK GKLD+AS     +   
Sbjct: 708 FMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDK 767

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
             + D  S+  +I  L   G    A EF   M+E
Sbjct: 768 QYSFDPASFMPVIDELGKRGSKHAADEFAERMME 801



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 49/87 (56%)

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L K+M +  + P  +T+NLLI A C +G++  A +++D+M  +G  P+  +   L++G+C
Sbjct: 140 LYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYC 199

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPF 544
             G      ++  ++++ G   + + +
Sbjct: 200 RAGLHSHGIDLLDEMRSSGALPNRVAY 226


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 229/474 (48%), Gaps = 8/474 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E  D L   RD   V+ ++  D      ++R  C   +   A      M +KG VP + 
Sbjct: 161 RELFDELTLSRDRLSVKSSIVFDL-----LVRVCCELRRADEAFKCFYMMKEKGIVPKIE 215

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T N +++   K+  +E A  +  EM  +R S    T+N  +   C+  +L KA      M
Sbjct: 216 TCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFM 275

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G +PN V++N ++H    +G +  A + L  +          D  T   L+    K 
Sbjct: 276 EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG---IEPDSYTYGSLISGMCKE 332

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +A  L++ M +  +  + V YN LI+G+C  GD+  AF+Y  +M+K+G +P V TY
Sbjct: 333 GRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTY 392

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N L++ L  +G++ EA      + K G+ PD I+Y  +I G    G+  KA +    ML 
Sbjct: 393 NLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLS 452

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K + P    +  +I    R   +  A  + + +L  GVS +V  FNA++      G++  
Sbjct: 453 KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVER 512

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           AF L KEM    + PD  T+N L+   C  G +  A  L DEM RRGI PD I+Y  LI 
Sbjct: 513 AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLIS 572

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+  RG++K+A  V  ++ ++G     + +  L K   + +E D A ++ ++ +
Sbjct: 573 GYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV 626



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 196/388 (50%), Gaps = 3/388 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  GK+  A      M   G  P+V+++N +++     G++E A  ++  M      P+
Sbjct: 259 LCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPD 318

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY + I+G C+   L++A  LF  M   G+ PN VT+N L+   C KG L  A  +  
Sbjct: 319 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 378

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E++          V T  +L+ + F  G   +A  +  +M +K I  D + YN+LING+ 
Sbjct: 379 EMVKKG---IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYS 435

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G+   AF    +ML +G  P  +TY +L+  L ++ ++ EA   +  +   GV+PD I
Sbjct: 436 RCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI 495

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            +  ++ G C +G++ +A   L  M  KSV P+   +N ++ G  R G +  A  + D M
Sbjct: 496 MFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 555

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              G+  +  ++N LI    R G I DAF ++ EML  G  P + TYN LI   C     
Sbjct: 556 KRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEG 615

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKG 515
            LA +L  EM+ +GI+PD  TY  LI+G
Sbjct: 616 DLAEELLKEMVNKGISPDDSTYLSLIEG 643



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 186/355 (52%), Gaps = 7/355 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I  A  +   M  KG  PD  T+  L++ +CK G LE+A  +  +M E+   PN  TY
Sbjct: 298 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 357

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYC   +L++A      M   GI P+  T+N+LVHAL  +G +G+A   + E+  
Sbjct: 358 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 417

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   D IT  IL++ Y + G+  +A  L N+M  K I+   V Y  LI        
Sbjct: 418 KG---IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 474

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F ++L +G  PDVI +N +++  C  G ++ A      + +  V PD++++ T
Sbjct: 475 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 534

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++QG C  G + +AR  L  M  + + P+   +N +I GYGR GD+ +AF +RD MLS G
Sbjct: 535 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 594

Query: 432 VSSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
            +  + T+NALI  L + + G +  A  L KEM+  GI PD  TY  LI    N+
Sbjct: 595 FNPTLLTYNALIKCLCKNQEGDL--AEELLKEMVNKGISPDDSTYLSLIEGMGNV 647



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 196/408 (48%), Gaps = 3/408 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           ++  A  L  +M +      V T N +VN LCK G L+KA   I  M  +   PN  +YN
Sbjct: 229 RMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYN 288

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I GY     ++ A  +   M   GI P+  T+  L+  +CK+G L +A     +++  
Sbjct: 289 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV-- 346

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
            +     + +T   L+D Y   GD  +A +  ++M +K I   +  YN+L++   + G +
Sbjct: 347 -EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRM 405

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A     +M K+G +PD ITYN L+N   + G   +A   +  +   G+ P  ++Y ++
Sbjct: 406 GEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSL 465

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I  L     + +A +    +L++ V P+  ++N ++DG+   G++  AF +   M    V
Sbjct: 466 IYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSV 525

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +  TFN L+    R G + +A  L  EM   GI PD  +YN LI      G I  A +
Sbjct: 526 PPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFR 585

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           + DEML  G  P ++TY  LIK  C       AEE+  ++   G++ D
Sbjct: 586 VRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 633



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 148/290 (51%), Gaps = 3/290 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G +  A   R +M++KG +P V T+N LV+ L   G + +AD +I+EM + 
Sbjct: 359 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 418

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  I GY R     KA  L + M + GI P  VT+  L++ L ++  + +A
Sbjct: 419 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 478

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                ++L   D   + DVI    ++D +  NG+  +A  L  +M +K++  D V +N L
Sbjct: 479 DDLFEKIL---DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 535

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + G C  G +  A     +M +RG  PD I+YNTL++   ++G + +A      +   G 
Sbjct: 536 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 595

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            P  ++Y  +I+ LC + +   A E L  M+ K + P+   +  +I+G G
Sbjct: 596 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 645



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 145/295 (49%), Gaps = 3/295 (1%)

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           N + F  L L  D    ++++ IV +++L+   C       AF  F  M ++G +P + T
Sbjct: 160 NRELFDELTLSRDRL--SVKSSIV-FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIET 216

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
            N +L+   K  +++ A   Y  + +  ++    ++  ++  LC  G + KAREF+  M 
Sbjct: 217 CNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFME 276

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
                P    +N II GY   G++  A  I D M   G+  + +T+ +LI    + G + 
Sbjct: 277 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 336

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L  +M+  G+ P+  TYN LI   CN G +  A    DEM+++GI P + TY  L+
Sbjct: 337 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 396

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
                 G M EA+++  +++  G+  D I + IL   Y R   + KA D+H + L
Sbjct: 397 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEML 451


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 208/418 (49%), Gaps = 9/418 (2%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           ++ Q+    +V ++N L+  LC  G ++ A  +  EM+    +P+  TY   I G+C + 
Sbjct: 249 ELFQELPHKNVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALG 305

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           EL+ A+ L   M   G+ PN   +  +V  LC KG + DA++ + +++     K   D  
Sbjct: 306 ELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMV---QRKVILDEA 362

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             T ++  +   GD   A   +++M +K + TD V Y  +ING C   ++  A     +M
Sbjct: 363 LYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEM 422

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
             R    D +TY  L++  CK+GK+ EA   +  + + GV P+ ++Y  +  GLC  GD+
Sbjct: 423 WARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDV 482

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A E L  M  K +      +N +I+G  + G L  A      M +  +  +V+T+  L
Sbjct: 483 QAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTL 542

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I A  + G +  A SL +EML  GI P + TYN+L+   C  G +    +L D ML + I
Sbjct: 543 IDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNI 602

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKES 557
            P+  TY  L+K +C   NMK   E++  +++  +  +   + IL K   + R MKE+
Sbjct: 603 HPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEA 660



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 204/417 (48%), Gaps = 3/417 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G++  A+ L  +M+  G  P+   +  +V  LC  G +  A  V+ +M + +
Sbjct: 297 LIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRK 356

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              + A Y   ++G+C   +L  A   F  M   G+  + VT+  +++ LC+   L +A 
Sbjct: 357 VILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAE 416

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L E+ A    +   D +T T+L+D Y K G   +A  + N M Q+ +  ++V Y  L 
Sbjct: 417 KLLQEMWAR---RLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALT 473

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  GD+ +A     +M  +G   +  TYN+L+N LCK G L++A      +    + 
Sbjct: 474 DGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLK 533

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y T+I  LC  GD+ +A   L  ML+K + P    +NV+++G+   G +     +
Sbjct: 534 PDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKL 593

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D ML   +  N  T+N+L+       ++     + K M    + P+  TYN+LI   C 
Sbjct: 594 LDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCK 653

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             ++  AL  +DEM+++G      +Y+ LI+    +    EA E+F  ++  GL  +
Sbjct: 654 ARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAE 710



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 179/396 (45%), Gaps = 3/396 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E +   + +V+  LC  G I  AL +   M+Q+  + D   +  +++  C  GDL  A 
Sbjct: 322 VEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSAR 381

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
               EM     + +  TY   I G CR  EL++A  L   M    +  + VT+ +L+   
Sbjct: 382 RWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGY 441

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G + +A +    ++       T +V+T T L D   K GD   A  L ++M  K ++
Sbjct: 442 CKRGKMAEAFQMHNAMVQRG---VTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLE 498

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +   YN LING C  G +  A      M      PDV TY TL++ LCK G LD A   
Sbjct: 499 LNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSL 558

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+ P  ++Y  ++ G C+ G +   ++ L  MLEK++ P    +N ++  Y  
Sbjct: 559 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCI 618

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             ++ +   I   M S  V  N  T+N LI    +  ++ +A     EM+  G      +
Sbjct: 619 ENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATS 678

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           Y+ LI           A +L+ +M + G+T +   Y
Sbjct: 679 YSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVY 714



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 182/382 (47%), Gaps = 3/382 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  V+   C  G + +A     +M +KG   D +T+  ++N LC+  +LE+A+ +++EM 
Sbjct: 364 YTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMW 423

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
             R   +  TY   I GYC+  ++ +A  + + M   G+ PN VT+  L   LCK+G + 
Sbjct: 424 ARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQ 483

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A + L E+    +     +  T   L++   K G   QA+    DM    ++ D+  Y 
Sbjct: 484 AANELLHEM---SNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYT 540

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+  C +GD+  A +   +ML +G  P ++TYN L+N  C  G+++        + + 
Sbjct: 541 TLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEK 600

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            + P+  +Y ++++  CI  ++    E    M  + V P  + +N++I G+ +  ++  A
Sbjct: 601 NIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEA 660

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
               D M+  G      +++ALI    +     +A  L  +M  +G+  +   Y+  I  
Sbjct: 661 LYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDL 720

Query: 481 SCNLGHIHLALQLYDEMLRRGI 502
           + N  ++   L L DE++   I
Sbjct: 721 NFNEDNLESTLALCDELVEASI 742



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 118/250 (47%), Gaps = 11/250 (4%)

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           ++ + G  P     N +L+ L     LDEA   +  L    V     SY  +++ LC  G
Sbjct: 222 RLRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHKNVC----SYNILLKALCDAG 273

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            +  AR+    M   +  P+   + ++I G+   G+L NA  + D M++ GV  N   + 
Sbjct: 274 RVKDARQLFDEM---ASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYT 330

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           +++      G I DA  + ++M+   +  D   Y  ++   CN G +  A + +DEM R+
Sbjct: 331 SVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRK 390

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G+  D +TYT +I G C    ++EAE++  ++    L +D + + +L   Y +  +  +A
Sbjct: 391 GLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEA 450

Query: 561 RDIHQKWLLR 570
             +H   + R
Sbjct: 451 FQMHNAMVQR 460


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 208/420 (49%), Gaps = 4/420 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G    AL L  +M+ KG    V+T+N +   LCK G++E A+ ++ EM     + +C
Sbjct: 332 CREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHC 391

Query: 189 ATYNAFITGYCR-VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
           + +N+ +  + R    LD  L L   M    ++PN       +  LCK+G   +A +   
Sbjct: 392 SLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWF 451

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
            VL    G    ++ TS  L+    +  +  +A  +   M    ++ D + YN++I   C
Sbjct: 452 LVLGKGLG---VNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCC 508

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
               +  A      M+KRGF PD+ T+NT L   C  GK+++  H    +   G+ PD +
Sbjct: 509 KASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIV 568

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y TII G C   D+ KA ++L+ +++  + P   I+N +I GYGR G +S+A  + D M
Sbjct: 569 TYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTM 628

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              G+     T+N+L+      G + +A  +  + +L  I   V  Y ++I   C +G I
Sbjct: 629 KHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKI 688

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A+  + EM  R I P+ +TYT L+  +C  GN +EA ++F ++ + G+  D + +  L
Sbjct: 689 DEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTL 748



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 201/432 (46%), Gaps = 5/432 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++  L  GG++  A  +  +M     V PDV T+  ++  LC+ G+++ A  ++ E+   
Sbjct: 186 LVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERS 245

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P   TYN  +   CR   +++A  L   M    +RP+ VT  IL++ L +    G+ 
Sbjct: 246 GIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEV 305

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E+  +  G   ++VI +  L+  + + G   +AL L+++M  K I+  +V YN++
Sbjct: 306 DAVLQEM--EGFGITPNEVIYNQ-LIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLI 362

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC-LCKQGKLDEASHFYGVLSKTG 361
               C  G++  A     +ML  G       +N+++   L   G+LD        +    
Sbjct: 363 AKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARF 422

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + P+       IQ LC  G   +A E    +L K +       N +I G  +  ++  A 
Sbjct: 423 LKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEAT 482

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   M+  GV  +  T+N +I    +   + +A  L+ +M+  G  PD+FT+N  + A 
Sbjct: 483 KVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAY 542

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           CNLG +   L L D+M   G+ PDI+TY  +I G+C   ++ +A +   ++   GL  + 
Sbjct: 543 CNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNA 602

Query: 542 IPFRILKKRYRR 553
           + +  L   Y R
Sbjct: 603 VIYNALIGGYGR 614



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 140/284 (49%), Gaps = 8/284 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           +KE    LK M D+G     +E D   +  +I+  C   K+  A+ LR  MI++G  PD+
Sbjct: 478 MKEATKVLKAMVDSG-----VEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDL 532

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T N  +   C +G +E   H++ +M      P+  TY   I GYC+  ++ KA      
Sbjct: 533 FTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIE 592

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           +  NG+RPN V +N L+    + G + DA+  L + +  +  + T   IT   LM     
Sbjct: 593 LIKNGLRPNAVIYNALIGGYGRNGSISDAIGVL-DTMKHNGIQPTP--ITYNSLMYWMCH 649

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +A  ++     KNI+  ++ Y ++I GFC  G I  A  YF +M  R   P+ +T
Sbjct: 650 AGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMT 709

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
           Y TL+   CK G  +EA   +  +  +G+ PD +SY T+I G C
Sbjct: 710 YTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCC 753



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 194/443 (43%), Gaps = 48/443 (10%)

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN-NGIRPNRVT 225
           G L  A     E+S    SP+  T N  +       +LD A  +F  M + N + P+  T
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
           + +++ ALC+ G +  A   L E+   +       V+T  +LMD+  ++G   +A  L  
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAEL---ERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKG 275

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M +  ++  IV + +LING           A   +M   G  P+ + YN L+   C++G
Sbjct: 276 RMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREG 335

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
              EA   +  +   G+    ++Y  I + LC  G++  A + L  ML   +     ++N
Sbjct: 336 HCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFN 395

Query: 406 VIID----GYGRC--------------------------------GDLSNAFSIRDLMLS 429
            ++     G GR                                 G    A  I  L+L 
Sbjct: 396 SVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLG 455

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+  N+ T NALI    +G ++ +A  + K M+  G+  D  TYN++I   C    +  
Sbjct: 456 KGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEE 515

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A+QL D+M++RG  PD+ T+   ++ +C  G +++   +  ++++ GL  D + +  +  
Sbjct: 516 AIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIID 575

Query: 550 RYRRMKESDKARDIHQ--KWLLR 570
            Y       KA+D+H+  K+L+ 
Sbjct: 576 GY------CKAKDVHKANKYLIE 592



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 144/321 (44%), Gaps = 38/321 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC G  +  A  + + M+  G   D +T+N ++   CK   +E+A  +  +M + 
Sbjct: 467 ALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKR 526

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  T+N F+  YC + +++  LHL   M + G++P+ VT+  ++   CK   +  A
Sbjct: 527 GFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKA 586

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K+L E++                      KNG                ++ + V YN L
Sbjct: 587 NKYLIELI----------------------KNG----------------LRPNAVIYNAL 608

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G+  NG IS A      M   G  P  ITYN+L+  +C  G ++EA   +       +
Sbjct: 609 IGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNI 668

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
               I Y  IIQG C  G I +A  +   M  + + P    +  ++  Y +CG+   AF 
Sbjct: 669 ELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFK 728

Query: 423 IRDLMLSFGVSSNVFTFNALI 443
           + D M+S G+  +  ++N LI
Sbjct: 729 LFDEMVSSGIVPDTVSYNTLI 749



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 151/320 (47%), Gaps = 21/320 (6%)

Query: 241 DAVKFLGEVLADDDGKAT---SDVIT---STILMDSYFKNGDKFQA-------LALWNDM 287
            A++ L  +L+D    A+    D+++   ST+L+ S   +G    +       L  +N +
Sbjct: 70  SALRLLQHILSDTHASASRHAEDLLSPRVSTLLLPSLVADGASLPSARRLISRLLFFNPL 129

Query: 288 FQKNIQ---TDIVAYNVLINGFCLN----GDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
                    +D  A   L+   CLN    G +S A   F ++  RG  P + T N L+  
Sbjct: 130 SVAAAAIADSDCTATADLLVRACLNSPAPGSLSCAADAFLELSTRGASPSIKTCNILVEA 189

Query: 341 LCKQGKLDEASHFYGVLSK-TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           L   G+LD A   +G +     VAPD  +Y  +I+ LC  G+I  A   L  +    + P
Sbjct: 190 LGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQP 249

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +NV++D   R G +  AF ++  M+   +  ++ TF  LI    RG    +  ++ 
Sbjct: 250 TVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVL 309

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           +EM   GI P+   YN LIG  C  GH   AL+L+DEM+ +GI   ++TY  + K  C  
Sbjct: 310 QEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKE 369

Query: 520 GNMKEAEEVFAKIQTLGLAI 539
           G M+ AE++  ++   G+ +
Sbjct: 370 GEMEHAEQILDEMLLAGMTV 389



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 120/272 (44%), Gaps = 11/272 (4%)

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF----QKNIQTDIVAYNVLING 305
           +AD D  AT+D++    L      N     +L+   D F     +     I   N+L+  
Sbjct: 136 IADSDCTATADLLVRACL------NSPAPGSLSCAADAFLELSTRGASPSIKTCNILVEA 189

Query: 306 FCLNGDISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
               G +  A   F +M       PDV TY  ++  LC+ G++D A      L ++G+ P
Sbjct: 190 LGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQP 249

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
             ++Y  ++  LC  G + +A +    M+E  + P    + ++I+G  R        ++ 
Sbjct: 250 TVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVL 309

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
             M  FG++ N   +N LI    R G   +A  L  EM+  GI   V TYNL+  A C  
Sbjct: 310 QEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKE 369

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
           G +  A Q+ DEML  G+T     +  ++  H
Sbjct: 370 GEMEHAEQILDEMLLAGMTVHCSLFNSVVAWH 401



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 50/96 (52%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+  C  GKI  A+   ++M  +   P+ +T+  L+   CK G+ E+A  +  EM 
Sbjct: 675 YTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMV 734

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
                P+  +YN  I+G C V+ LDK +   + M++
Sbjct: 735 SSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS 770


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 237/472 (50%), Gaps = 15/472 (3%)

Query: 77  SDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGT 136
           S     P ++ N  D +     +R+  MR T P+       + +   ++          T
Sbjct: 28  SHFHSQPPSIQNVDDAV--SQFNRMLCMRHTPPI-----IQFNK---ILDSFAKMKHYST 77

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L  ++  KG  PD++T N L+N  C +G +     V+ ++ +    P+  T N  I 
Sbjct: 78  AVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIK 137

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C   ++ KALH    +   G + N+V++  L++ +CK G    A+K L ++    DG+
Sbjct: 138 GLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKI----DGR 193

Query: 257 ATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
            T  +V   + ++D+  K     +A  L+++M  K I  D+V Y+ LI GFC+ G +  A
Sbjct: 194 LTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEA 253

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                +M+ +   P+V TYN L++ LCK+GK+ EA     V+ K  V PD I+Y T++ G
Sbjct: 254 IGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
             +  ++ KA+    +M    V P+ H + ++I+G+ +   +  A ++   M    +   
Sbjct: 314 YFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPG 373

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           + T+++LI    + G I   + L  EM   G   DV TY+ LI   C  GH+  A+ L++
Sbjct: 374 IVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFN 433

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +M  + I P+I T+T L+ G C  G +K+A+EVF  + T G  ++   + ++
Sbjct: 434 KMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVM 485



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 224/447 (50%), Gaps = 3/447 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G+I     +  K++++G  PD +T N L+  LC  G ++KA H   ++    
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  +Y   I G C++ +   A+ L   +     +PN   ++ ++ ALCK  L+ +A 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+        ++DV+T + L+  +   G   +A+ L N+M  K I  ++  YN+L+
Sbjct: 220 GLFSEMTVKG---ISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G +  A +    MLK    PDVITY+TL++      ++ +A H +  +S  GV 
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y  +I G C +  + +A      M +K++VP    ++ +IDG  + G +   + +
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M   G  ++V T+++LI    + G +  A +L  +M    I P++FT+ +L+   C 
Sbjct: 397 IDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCK 456

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A +++ ++L +G   ++ TY  +I GHC +G ++EA  + +K++  G   +   
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFT 516

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           F  +     +  E+DKA  + ++ + R
Sbjct: 517 FETIIIALFKKDENDKAEKLLRQMIAR 543



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 210/415 (50%), Gaps = 3/415 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I+ LCL G++  AL    K++ +G   + +++  L+N +CKIGD   A  ++R++   
Sbjct: 134 TLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGR 193

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   Y+  I   C+   + +A  LFS M   GI  + VT++ L++  C +G L +A
Sbjct: 194 LTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEA 253

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  L E++         +V T  IL+D+  K G   +A ++   M +  ++ D++ Y+ L
Sbjct: 254 IGLLNEMVLK---TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTL 310

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+ L  ++  A   F  M   G  PDV TY  L+N  CK   +DEA + +  + +  +
Sbjct: 311 MDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNM 370

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  ++Y ++I GLC  G I    + +  M ++    +   ++ +IDG  + G L  A +
Sbjct: 371 VPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIA 430

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M    +  N+FTF  L+    +GG + DA  + +++L  G   +V+TYN++I   C
Sbjct: 431 LFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 490

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
             G +  AL +  +M   G  P+  T+  +I     +    +AE++  ++   GL
Sbjct: 491 KQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 173/315 (54%), Gaps = 4/315 (1%)

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           + T  +I    ++DS+ K      A++L + +  K IQ D++  N+LIN FC  G I+  
Sbjct: 54  RHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFG 113

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           F+   ++LKRG+ PD +T NTL+  LC +G++ +A HF+  L   G   +Q+SY T+I G
Sbjct: 114 FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLING 173

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           +C  GD   A + L  +  +   P   +++ IID   +   +S A+ +   M   G+S++
Sbjct: 174 VCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISAD 233

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           V T++ LI      G + +A  L  EM+L  I P+V+TYN+L+ A C  G +  A  +  
Sbjct: 234 VVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLA 293

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
            ML+  + PD+ITY+ L+ G+     +K+A+ VF  +  +G+  D   + IL   + + K
Sbjct: 294 VMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNK 353

Query: 556 ESDKA----RDIHQK 566
             D+A    +++HQK
Sbjct: 354 MVDEALNLFKEMHQK 368



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 156/320 (48%), Gaps = 38/320 (11%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG------ 167
           +  D   +  +I   C+ GK+  A+ L  +M+ K   P+V T+N LV+ LCK G      
Sbjct: 230 ISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAK 289

Query: 168 -----------------------------DLEKADHVIREMSEMRPSPNCATYNAFITGY 198
                                        +++KA HV   MS M  +P+  TY   I G+
Sbjct: 290 SVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 349

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           C+   +D+AL+LF  M    + P  VT++ L+  LCK G +      + E+   D G+  
Sbjct: 350 CKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM--RDRGQP- 406

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           +DVIT + L+D   KNG   +A+AL+N M  + I+ +I  + +L++G C  G +  A   
Sbjct: 407 ADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEV 466

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           F  +L +G+  +V TYN ++N  CKQG L+EA      +   G  P+  +++TII  L  
Sbjct: 467 FQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFK 526

Query: 379 HGDIVKAREFLLSMLEKSVV 398
             +  KA + L  M+ + ++
Sbjct: 527 KDENDKAEKLLRQMIARGLL 546



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 46/115 (40%)

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           DA S    ML     P +  +N ++ +   + H   A+ L   +  +GI PD+IT   LI
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
              C  G +     V AKI   G   D +    L K      +  KA   H K L
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 217/432 (50%), Gaps = 10/432 (2%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L R++  K    +V +HN L+  L   G L+ A    +   EM   P+  TY   + 
Sbjct: 243 AIALFRELPDK----NVCSHNILLKALLSAGRLKDA---CQHFDEMSSPPDVVTYGTMVH 295

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           GYC   EL+ A+ L   MA  G+  N   +  ++  LC KG + DA++ L ++     G 
Sbjct: 296 GYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMH--GV 353

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
           A   V+ +T++   +   GD   A  L+ +M ++ +  D V +  LING C  G++  A 
Sbjct: 354 ALDAVVFTTVI-SGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEAD 412

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M+ +G   DV+TY  L++  CK+G + EA   +  +    VAP+ ++Y  +  GL
Sbjct: 413 RVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGL 472

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  GD+  A E L  M  K +    + +N +I+G  + G+L  A  I   M + G  ++V
Sbjct: 473 CKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDV 532

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           +T+  LI    + G    A ++ +EML  GI P + TYN+L+   C  G +    +L + 
Sbjct: 533 YTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEW 592

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           ML + + P+++TY  L+K +C   NMK   E++  + +  +A +   + IL K + + + 
Sbjct: 593 MLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARN 652

Query: 557 SDKARDIHQKWL 568
             +A   HQ+ +
Sbjct: 653 MKEALYFHQEMI 664



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 206/417 (49%), Gaps = 3/417 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C+ G++  A+ L  +M  KG   +   +  ++  LC  G +  A  V+ +M+   
Sbjct: 293 MVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHG 352

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            + +   +   I+G+C   +L  A  LF  M   G+  +RVTH  L++ LC+ G L +A 
Sbjct: 353 VALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEAD 412

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E++   D     DV+T T+L+D Y K G+  +A  + N+M  + +  ++V Y  L 
Sbjct: 413 RVLQEMV---DKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALS 469

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  GD+ +A     +M  +G   +V TYN+L+N LCK G L++A      +   G  
Sbjct: 470 DGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHR 529

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D  +Y T+I  LC  G+  +A   L  ML+K + P    +NV+++G+   G +     +
Sbjct: 530 TDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKL 589

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + ML   V  NV T+N+L+       ++     + K M    + P+  TYN+LI   C 
Sbjct: 590 LEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCK 649

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             ++  AL  + EM+ +G+     +Y+ LI+    +    EA   F K++  GL  +
Sbjct: 650 ARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAE 706



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 190/398 (47%), Gaps = 5/398 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE++   + +VI  LC  G++  AL +   M   G   D +    +++  C  GDL  A 
Sbjct: 318 LESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAAR 377

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM +   + +  T+ A I G CR  EL +A  +   M + G+  + VT+ +L+   
Sbjct: 378 RLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGY 437

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G + +A +   E++     +   +V+T T L D   K GD   A  L ++M  K ++
Sbjct: 438 CKRGNMVEAFRVHNEMVGR---RVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLE 494

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++  YN LING C  G++  A     +M   G   DV TY TL++ LCK G+ D A + 
Sbjct: 495 LNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNM 554

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+ P   +Y  ++ G C+ G +   ++ L  MLEK+V P    +N ++  Y  
Sbjct: 555 LQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCI 614

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             ++ +   I   M S  V+ N  T+N LI    +  ++ +A    +EM+  G+     +
Sbjct: 615 DKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASS 674

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGIT--PDIITY 509
           Y+ LI           A   +D+M   G+T  PD+ ++
Sbjct: 675 YSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF 712



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 179/375 (47%), Gaps = 3/375 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI   C  G +  A  L  +M ++G   D +TH  L+N LC+ G+L++AD V++EM +  
Sbjct: 363 VISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKG 422

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TY   I GYC+   + +A  + + M    + PN VT+  L   LCK+G +  A 
Sbjct: 423 LDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAAN 482

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E+    +     +V T   L++   K G+  QA+ +  +M     +TD+  Y  LI
Sbjct: 483 ELLHEMC---NKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLI 539

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C +G+   A     +ML +G  P + TYN L+N  C  G+++        + +  V 
Sbjct: 540 DTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVR 599

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y ++++  CI  ++    E    M  + V P  + +N++I G+ +  ++  A   
Sbjct: 600 PNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYF 659

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+  G+     +++ALI    +     +A     +M  +G+  +   Y+  +  S N
Sbjct: 660 HQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFN 719

Query: 484 LGHIHLALQLYDEML 498
             ++   + L DE++
Sbjct: 720 EDNLESTITLCDELV 734


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/523 (27%), Positives = 232/523 (44%), Gaps = 73/523 (13%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D R +  ++   C  G++  A+ +R +M++ G   +++  N L+   CK+G + +A+
Sbjct: 328 LVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAE 387

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V   M +    P+C +YN  + GYCR  ++ KA  L   M  +GI P  VT+N ++  L
Sbjct: 388 RVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGL 447

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
              G   DA+     ++   +   T + I+   ++D +FK GD  +A+ LW ++  +   
Sbjct: 448 VDVGSYDDALHLWHLMV---ERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFT 504

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
              VA+N +I+G C  G +  A A F +M + G  PD ITY TL +  CK G + EA   
Sbjct: 505 KSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQI 564

Query: 354 YGVLSKT-----------------------------------GVAPDQISYKTIIQGLCI 378
            GV+ +                                    G++P+ ++Y T+I G C 
Sbjct: 565 KGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCD 624

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV------ 432
              + KA      M+E+   P   + + I+    R   +S A  I D ML F +      
Sbjct: 625 EQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNK 684

Query: 433 -----------------------------SSNVFTFNALILAETRGGSIFDAFSLKKEML 463
                                         SN   +N  I    + G + +A S+   ++
Sbjct: 685 CSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLM 744

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             G  PD FTY  LI A    G++  A +L DEML +G+ P+I  Y  LI G C  GN+ 
Sbjct: 745 SRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNID 804

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            A+ +F K+   GL  + + + IL   Y R+ + DKA  + +K
Sbjct: 805 RAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREK 847



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 215/445 (48%), Gaps = 39/445 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+   C  G++  A+ +  KM+++G  P+V+T+N LVN     GD E  + V+R MSE  
Sbjct: 232 VVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERG 291

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP-NRVTHNILVHALCKKGLLGDA 242
            S N  T    + GYC+  ++D+A  L   +  + +   +   + +LV   C+ G + DA
Sbjct: 292 VSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDA 351

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V+   E+L    G   + VI +T L+  Y K G   +A  ++  M   N++ D  +YN L
Sbjct: 352 VRIRDEMLRV--GLKVNMVICNT-LIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTL 408

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+C  G +S AF    +ML  G  P V+TYNT++  L   G  D+A H + ++ + GV
Sbjct: 409 LDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGV 468

Query: 363 APDQIS-----------------------------------YKTIIQGLCIHGDIVKARE 387
            P++IS                                   + T+I GLC  G +++A  
Sbjct: 469 TPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGA 528

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M E  + P+   +  + DGY + G++  AF I+ +M    +S+++  +N+LI    
Sbjct: 529 VFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLF 588

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +   + D   L  EM   G+ P+V TY  LI   C+   +  A  LY EM+ RG TP+++
Sbjct: 589 KIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVV 648

Query: 508 TYTELIKGHCARGNMKEAEEVFAKI 532
             ++++        + EA  +  K+
Sbjct: 649 VCSKIVSSLYRDDRISEATVILDKM 673



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 210/439 (47%), Gaps = 2/439 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+   A+ +  +++  G VPDV   + +VN  C++G ++ A  V+ +M +    PN  TY
Sbjct: 205 GEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTY 264

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  + GY    + +    +   M+  G+  N VT  +L+   CKKG + +A K L EV  
Sbjct: 265 NGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREV-- 322

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
           ++D     D     +L+D Y + G    A+ + ++M +  ++ ++V  N LI G+C  G 
Sbjct: 323 EEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQ 382

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F  M+     PD  +YNTLL+  C++GK+ +A      +   G+ P  ++Y T
Sbjct: 383 VCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNT 442

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I+GL   G    A      M+E+ V P       ++D + + GD   A  +   +L  G
Sbjct: 443 VIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRG 502

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
            + +   FN +I    + G + +A ++   M   G+ PD  TY  L    C  G++  A 
Sbjct: 503 FTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAF 562

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           Q+   M R+ ++  I  Y  LI G      + +  ++  ++QT GL+ + + +  L   +
Sbjct: 563 QIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGW 622

Query: 552 RRMKESDKARDIHQKWLLR 570
              ++ DKA  ++ + + R
Sbjct: 623 CDEQKLDKAFHLYFEMIER 641



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 189/398 (47%), Gaps = 4/398 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G    AL++  +M + G VP + + ++L+ +L + G+   A  V  ++      P+    
Sbjct: 170 GMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMC 229

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  +  +C+V  +D A+ +   M   G+ PN VT+N LV+    +G      + L   L 
Sbjct: 230 SIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLR--LM 287

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN-IQTDIVAYNVLINGFCLNG 310
            + G  + +V+T T+LM  Y K G   +A  L  ++ +   +  D   Y VL++G+C  G
Sbjct: 288 SERG-VSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMG 346

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A     +ML+ G   +++  NTL+   CK G++ EA   +  +    + PD  SY 
Sbjct: 347 RMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYN 406

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T++ G C  G + KA      ML   + P    +N +I G    G   +A  +  LM+  
Sbjct: 407 TLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVER 466

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV+ N  +   ++    + G    A  L KE+L  G       +N +I   C +G +  A
Sbjct: 467 GVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEA 526

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
             ++D M   G++PD ITY  L  G+C  GN++EA ++
Sbjct: 527 GAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQI 564



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 152/312 (48%), Gaps = 9/312 (2%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  A  ++  M ++     +  +N L++ L KI  L     ++ EM     SPN 
Sbjct: 553 CKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNV 612

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TY   I+G+C   +LDKA HL+  M   G  PN V  + +V +L +   + +A   L +
Sbjct: 613 VTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDK 672

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI---VAYNVLING 305
           +L D D  A  +  +     D   KN    +A  + + + + +I   +   + YN+ I+G
Sbjct: 673 ML-DFDILAVHNKCS-----DKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDG 726

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C +G +  A +    ++ RGFLPD  TY TL++     G +DEA      + + G+ P+
Sbjct: 727 LCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPN 786

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
              Y  +I GLC  G+I +A+     + +K +VP    +N++I  Y R GDL  A  +R+
Sbjct: 787 ITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLRE 846

Query: 426 LMLSFGVSSNVF 437
            M   G+S+ + 
Sbjct: 847 KMTEEGISTRII 858



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 158/348 (45%), Gaps = 23/348 (6%)

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           N+  RP+ ++++IL+H L    L  +A   L +                  LMD +  N 
Sbjct: 94  NSHYRPHSLSYSILLHILTHARLFPEATTVLRQ------------------LMDLHCTN- 134

Query: 276 DKFQALALWNDMFQKNIQTDIVA--YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
             ++A A+ N +F    +    +  +++L+  F   G    A   F +M + G +P + +
Sbjct: 135 -NYRAYAVCNHVFSVYKEFGFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRS 193

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
            + LL  L ++G+   A   +  +  TG+ PD      ++   C  G +  A E L  M+
Sbjct: 194 CSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMV 253

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           ++ + P    +N +++GY   GD      +  LM   GVS NV T   L+    + G + 
Sbjct: 254 KEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMD 313

Query: 454 DAFSLKKEMLLDGIF-PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
           +A  L +E+  D +   D   Y +L+   C +G +  A+++ DEMLR G+  +++    L
Sbjct: 314 EAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTL 373

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           IKG+C  G + EAE VF  +    L  D   +  L   Y R  +  KA
Sbjct: 374 IKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKA 421


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 206/404 (50%), Gaps = 3/404 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++  A  L+ +M +KG  P   T+  L+  LC  G ++KA ++  EM    
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY   I G CR  ++++A  +   M  + I P+ +T+N L++  CK G +  A 
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L  +   +      +V T   LM+   + G  ++A+ L   M    +  DIV+YNVLI
Sbjct: 392 ELLTVM---EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLI 448

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G +++A+     M      PD +T+  ++N  CKQGK D AS F G++ + G++
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D+++  T+I G+C  G    A   L ++++  ++  PH  NVI+D   +   +    ++
Sbjct: 509 LDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              +   G+  +V T+  L+    R G I  +F + + M L G  P+V+ Y ++I   C 
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQ 628

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            G +  A +L   M   G++P+ +TYT ++KG+   G +  A E
Sbjct: 629 FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 194/398 (48%), Gaps = 5/398 (1%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R +  +I+ LC  G I  A  L  +MI +G  P+V T+  L++ LC+ G +E+A+ V R+
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M + R  P+  TYNA I GYC+   +  A  L + M     +PN  T N L+  LC+ G 
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
              AV  L  +L   D   + D+++  +L+D   + G    A  L + M   +I+ D + 
Sbjct: 422 PYKAVHLLKRML---DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           +  +IN FC  G    A A+   ML++G   D +T  TL++ +CK GK  +A      L 
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYGRCGDL 417
           K  +     S   I+  L   G  VK    +L  + K  +VP    +  ++DG  R GD+
Sbjct: 539 KMRILTTPHSLNVILDMLS-KGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
           + +F I +LM   G   NV+ +  +I    + G + +A  L   M   G+ P+  TY ++
Sbjct: 598 TGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVM 657

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           +    N G +  AL+    M+ RG   +   Y+ L++G
Sbjct: 658 VKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 128/500 (25%), Positives = 218/500 (43%), Gaps = 74/500 (14%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM---------------------- 179
           R+M   G V  ++ +  +VN LCK G  E A+  + ++                      
Sbjct: 184 RRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRG 243

Query: 180 --------------SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
                          E+  +PN  +Y+  I G C V  L++A  L   M   G +P+  T
Sbjct: 244 LNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
           + +L+ ALC +GL+  A     E++         +V T T+L+D   ++G   +A  +  
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRG---CKPNVHTYTVLIDGLCRDGKIEEANGVCR 360

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M +  I   ++ YN LING+C +G +  AF     M KR   P+V T+N L+  LC+ G
Sbjct: 361 KMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           K  +A H    +   G++PD +SY  +I GLC  G +  A + L SM    + P+   + 
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF--------- 456
            II+ + + G    A +   LML  G+S +  T   LI    + G   DA          
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKM 540

Query: 457 --------------------SLKKEMLL------DGIFPDVFTYNLLIGASCNLGHIHLA 490
                                +K+E+ +       G+ P V TY  L+      G I  +
Sbjct: 541 RILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGS 600

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
            ++ + M   G  P++  YT +I G C  G ++EAE++ + +Q  G++ +H+ + ++ K 
Sbjct: 601 FRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660

Query: 551 YRRMKESDKARDIHQKWLLR 570
           Y    + D+A +  +  + R
Sbjct: 661 YVNNGKLDRALETVRAMVER 680



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 179/368 (48%), Gaps = 6/368 (1%)

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           +RE+   R +  C  Y++ +    +++    A   +  M  +G     + +  +V+ALCK
Sbjct: 150 LREVFGFRLNYPC--YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCK 207

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQT 294
            G    A  F+ ++L    G      I +++L+  + +  +   AL +++ M ++     
Sbjct: 208 NGYTEAAEMFMSKIL--KIGFVLDSHIGTSLLL-GFCRGLNLRDALKVFDVMSKEVTCAP 264

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           + V+Y++LI+G C  G +  AF    QM ++G  P   TY  L+  LC +G +D+A + +
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G  P+  +Y  +I GLC  G I +A      M++  + P    +N +I+GY + 
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G +  AF +  +M       NV TFN L+    R G  + A  L K ML +G+ PD+ +Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N+LI   C  GH++ A +L   M    I PD +T+T +I   C +G    A      +  
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504

Query: 535 LGLAIDHI 542
            G+++D +
Sbjct: 505 KGISLDEV 512



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 140/598 (23%), Positives = 247/598 (41%), Gaps = 105/598 (17%)

Query: 31  LNVARIFSNSRTCSDDDNLPCTLNDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAVFNAL 90
           L V  + S   TC+ +      L   +  VG     +    F  KD   E   Q      
Sbjct: 250 LKVFDVMSKEVTCAPNSVSYSILIHGLCEVG-----RLEEAFGLKDQMGEKGCQPSTRTY 304

Query: 91  DLILKENLDR------LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKM 144
            +++K   DR           +  P  C  + +   +  +I  LC  GKI  A  + RKM
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGC--KPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           ++    P V+T+N L+N  CK G +  A  ++  M +    PN  T+N  + G CRV + 
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD----------- 253
            KA+HL   M +NG+ P+ V++N+L+  LC++G +  A K L  +   D           
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482

Query: 254 ------DGKA---------------TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
                  GKA               + D +T T L+D   K G    AL +   + +  I
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542

Query: 293 QT-----------------------------------DIVAYNVLINGFCLNGDISSAFA 317
            T                                    +V Y  L++G   +GDI+ +F 
Sbjct: 543 LTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFR 602

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
               M   G LP+V  Y  ++N LC+ G+++EA      +  +GV+P+ ++Y  +++G  
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY---GRCGDLSNAFSIRDLMLSFGVSS 434
            +G + +A E + +M+E+       I++ ++ G+    +  D S   ++ D+ L     +
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALR---ET 719

Query: 435 NVFTFNALI-LAETRGG-----SIFDAFSLKKE------------MLLDGIFPDVFTYNL 476
           +    N LI + E  GG      IF    L KE            +L  G+F +    ++
Sbjct: 720 DPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDI 778

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           ++ + C+       ++L   +L+ G  P   ++  +I+G    G+ + A E+  ++ T
Sbjct: 779 IMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLT 836



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 26/290 (8%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           G K+   L +  K+ + G VP V+T+  LV+ L + GD+  +  ++  M      PN   
Sbjct: 559 GCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYP 618

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y   I G C+   +++A  L S M ++G+ PN VT+ ++V      G L  A++ +  ++
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMV 678

Query: 251 ADDDGKATSDVITSTILMDSYF-KNGDKFQALALWNDMFQKNIQTDIVAYNVLIN----- 304
             + G   +D I S++L      + G      +  +D+  +  +TD    N LI+     
Sbjct: 679 --ERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALR--ETDPECINELISVVEQL 734

Query: 305 GFCLNGDISSAFAYFCQ-------------MLKRG-FLPDVITYNTLLNCLCKQGKLDEA 350
           G C++G         C+             +L+RG FL   +  + ++   C + K  + 
Sbjct: 735 GGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM--DIIMESYCSKKKHTKC 792

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
                ++ K+G  P   S+  +IQGL   GD  +ARE ++ +L  + V E
Sbjct: 793 MELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVE 842


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 221/440 (50%), Gaps = 3/440 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G +  A  L  +M + G  PD++T+N L++   K+G L++   +  +M +  
Sbjct: 261 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 320

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYNA I  +C+   + KA      M  NG++PN VT++  + A CK+G+L +A+
Sbjct: 321 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 380

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           KF  ++        T +  T T L+D+  K G+  +AL L  ++ Q  I+ ++V Y  L+
Sbjct: 381 KFFVDM---RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALL 437

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G +  A   F  ML  G  P+  TY  L++   K  +++ A      + +  + 
Sbjct: 438 DGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIK 497

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD + Y TI+ GLC    + +A+  +  + E  +     I+  ++D Y + G  + A ++
Sbjct: 498 PDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTL 557

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + ML  G+ +   T+ ALI    + G + +A      M   G+ P+V  Y  L+   C 
Sbjct: 558 LEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCK 617

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
                +A +L+DEML +G+ PD I YT LI G+   GN++EA  +  ++  +G+ +D   
Sbjct: 618 NNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHA 677

Query: 544 FRILKKRYRRMKESDKARDI 563
           +  L        +  KAR++
Sbjct: 678 YTALIWGLSHSGQVQKARNL 697



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 193/410 (47%), Gaps = 43/410 (10%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +L+E +     MR     R  L  +   + ++I   C  G +  AL L  +++Q G   +
Sbjct: 375 MLQEAIKFFVDMR-----RVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLN 429

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V+T+  L++ LC+ G +++A+ V R M     +PN  TY A + G+ +  E++ A  +  
Sbjct: 430 VVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILK 489

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M    I+P+ + +  ++  LC +  L +A   +GE+                       
Sbjct: 490 EMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIK---------------------- 527

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
                           +  I T+ V Y  L++ +  +G  + A     +ML  G +   +
Sbjct: 528 ----------------ESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEV 571

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TY  L++ LCK G + EA H +G +S+ G+ P+   Y  ++ GLC +     A++    M
Sbjct: 572 TYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEM 631

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           L+K ++P+   +  +IDG  + G+L  A ++RD M+  G+  ++  + ALI   +  G +
Sbjct: 632 LDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQV 691

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
             A +L  EM+  G+ PD   Y  LI     LG +  AL+L +EM +RG+
Sbjct: 692 QKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 741



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 190/407 (46%), Gaps = 7/407 (1%)

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
           LW  R +     VP     + L + L ++G LE+A     +M + R  P   + NA +  
Sbjct: 174 LWATRNV----CVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHR 229

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
             +V   D +   F  M   GI+ +  T+NI++  LCK+G L  A     ++    +   
Sbjct: 230 LSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQM---KEAGF 286

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
           T D++T   L+D + K G   + + ++  M   +   D++ YN LIN FC    +  AF 
Sbjct: 287 TPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFE 346

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
           +  +M   G  P+V+TY+T ++  CK+G L EA  F+  + +  + P++ +Y ++I   C
Sbjct: 347 FLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANC 406

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G++ +A + +  +L+  +      +  ++DG    G +  A  +   ML+ GV+ N  
Sbjct: 407 KAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQE 466

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T+ AL+    +   +  A  + KEM    I PD+  Y  ++   CN   +  A  L  E+
Sbjct: 467 TYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI 526

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
              GI  + + YT L+  +   G   EA  +  ++  LGL    + +
Sbjct: 527 KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTY 573



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 140/305 (45%), Gaps = 8/305 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           +KE  +  + M + G     +  +   + A++       ++  A  + ++M +K   PD+
Sbjct: 446 MKEAEEVFRAMLNAG-----VAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 500

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           L +  ++  LC    LE+A  +I E+ E   + N   Y   +  Y +  +  +AL L   
Sbjct: 501 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 560

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M + G+    VT+  L+  LCK GL+ +A+   G +    +     +V   T L+D   K
Sbjct: 561 MLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRM---SEIGLQPNVAVYTALVDGLCK 617

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           N     A  L+++M  K +  D +AY  LI+G   +G++  A     +M++ G   D+  
Sbjct: 618 NNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHA 677

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y  L+  L   G++ +A +    +   GV PD++ Y  +I+     G + +A E    M 
Sbjct: 678 YTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMA 737

Query: 394 EKSVV 398
           ++ ++
Sbjct: 738 KRGMI 742



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 101/220 (45%)

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +P    ++ L + L + G L+EAS  +  + K  V P   S   ++  L   G    +R+
Sbjct: 182 VPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRK 241

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
           F   M    +      +N++ID   + GDL  A S+   M   G + ++ T+N+LI    
Sbjct: 242 FFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHG 301

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G + +   + ++M      PDV TYN LI   C    +  A +   EM   G+ P+++
Sbjct: 302 KLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVV 361

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           TY+  I   C  G ++EA + F  ++ + L  +   +  L
Sbjct: 362 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSL 401


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 230/460 (50%), Gaps = 5/460 (1%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L  D   +  VI  LC G ++  A  L ++M      P+ +T + L++  CK GD+E
Sbjct: 157 RNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVE 216

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +   ++ EM +M    +   Y+A I+G+C   ++++   LF+ M    + PN VT++ L+
Sbjct: 217 EGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLM 276

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           +ALCKK    +A + L  +      K   DV+  T+L D   KNG    A+ + + M ++
Sbjct: 277 NALCKKQKWKEAAQMLDTMTG---CKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKR 333

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             + + V YN +ING C  G +  A      M K+G  PDV+TY+TL+  LC  GK+DEA
Sbjct: 334 GEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEA 393

Query: 351 SHFYGVL--SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
                +L   +  + PD  ++  +IQ LC    +  A+    +M+E+        +N++I
Sbjct: 394 VDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILI 453

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           DGY   G L+ A  +    +  G+S N  T+  LI    +   +  A  L  +    G  
Sbjct: 454 DGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTR 513

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P V  YN L+ + C    +  A  L+ EM      PD++++  +I G    G+++ A+E+
Sbjct: 514 PTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKEL 573

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             ++  + L  D+I F IL  R+ ++ + D+A  ++++ +
Sbjct: 574 LLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMV 613



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 214/426 (50%), Gaps = 5/426 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++  C  G    A+ L   M +   +PD +++N ++N LCK   L +A  + +EM    
Sbjct: 135 LLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGE 194

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T++A I G+C+  ++++   L   M   G+  +   ++ L+   C KG +    
Sbjct: 195 CKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGK 254

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+L  +    T +V+T + LM++  K     +A  + + M    ++ D+VAY VL 
Sbjct: 255 ELFNEMLRKN---VTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLA 311

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G   NG  S A      M+KRG  P+ +TYN ++N LCK+G++D+A      ++K G  
Sbjct: 312 DGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKK 371

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS--VVPEPHIWNVIIDGYGRCGDLSNAF 421
           PD ++Y T+++GLC  G I +A + L  ++ K   + P+   +N++I    +   L +A 
Sbjct: 372 PDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAK 431

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   M+  G  SN+ T+N LI      G +  A  L K+ +  GI P+  TY +LI   
Sbjct: 432 RVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGL 491

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C +  + +A  L+++    G  P +  Y  L+   C   ++++A  +F +++      D 
Sbjct: 492 CKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDV 551

Query: 542 IPFRIL 547
           + F I+
Sbjct: 552 VSFNII 557



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 209/445 (46%), Gaps = 13/445 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E    L+ M   G     LE D   + A+I   C  G I     L  +M++K   P+V
Sbjct: 215 VEEGFGLLEEMEKMG-----LEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNV 269

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T++ L+N LCK    ++A  ++  M+  +  P+   Y     G  +      A+ +   
Sbjct: 270 VTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDL 329

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G  PN VT+N +++ LCK+G + DA+  L E +A    K   DV+T + L+     
Sbjct: 330 MVKRGEEPNNVTYNAIINGLCKEGRVDDALGIL-ETMAKKGKKP--DVVTYSTLVKGLCG 386

Query: 274 NGDKFQALALWNDMFQK--NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            G   +A+ L N +  K  +I+ D+ A+N++I   C    +  A   +  M++RGF  ++
Sbjct: 387 VGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNI 446

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TYN L++     GKL +A   +     +G++P+  +Y  +I GLC    +  A+     
Sbjct: 447 VTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNK 506

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
                  P    +N ++    R   +  A ++   M +     +V +FN +I    + G 
Sbjct: 507 KRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGD 566

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           +  A  L  EML   + PD  T+++LI     LG +  A  LY+ M+  G  PD + +  
Sbjct: 567 VESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDS 626

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLG 536
           L+KG+  +G   + E+V + +Q + 
Sbjct: 627 LLKGYSLKG---KTEKVVSMLQQMA 648



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 193/392 (49%), Gaps = 10/392 (2%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           KE    L TM  TG   C +  D   +  +   L   G+   A+ +   M+++G  P+ +
Sbjct: 286 KEAAQMLDTM--TG---CKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNV 340

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+N ++N LCK G ++ A  ++  M++    P+  TY+  + G C V ++D+A+ L + +
Sbjct: 341 TYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLL 400

Query: 215 ANNG--IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            +    I+P+    N+++  LCK+  L  A +    ++   +    S+++T  IL+D Y 
Sbjct: 401 MSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMV---ERGFPSNIVTYNILIDGYL 457

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
             G   +AL LW D     I  +   Y VLING C    +S A   F +    G  P V 
Sbjct: 458 SAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVS 517

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            YNTL+  LC++  +++A + +  +      PD +S+  II G    GD+  A+E LL M
Sbjct: 518 EYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEM 577

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           L  ++VP+   ++++I+ + + G L  A S+ + M+S G   +   F++L+   +  G  
Sbjct: 578 LNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKT 637

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
               S+ ++M    +  D    + ++   CN+
Sbjct: 638 EKVVSMLQQMADKDVVLDSKLTSTILACLCNM 669



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 170/379 (44%), Gaps = 40/379 (10%)

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N   +N  + G+C+  +  KA+ LF  M  N + P+ V++N +++ LCK   L       
Sbjct: 128 NVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRL------- 180

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
                                           +A  L+ +M     + + V ++ LI+GF
Sbjct: 181 -------------------------------VEAKELFKEMKGGECKPNSVTFSALIDGF 209

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C NGD+   F    +M K G   DV  Y+ L++  C +G ++     +  + +  V P+ 
Sbjct: 210 CKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNV 269

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           ++Y  ++  LC      +A + L +M    V P+   + V+ DG  + G  S+A  + DL
Sbjct: 270 VTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDL 329

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M+  G   N  T+NA+I    + G + DA  + + M   G  PDV TY+ L+   C +G 
Sbjct: 330 MVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGK 389

Query: 487 IHLALQLYDEMLRRG--ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           I  A+ L + ++ +   I PD+  +  +I+  C +  ++ A+ V+  +   G   + + +
Sbjct: 390 IDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTY 449

Query: 545 RILKKRYRRMKESDKARDI 563
            IL   Y    +  KA ++
Sbjct: 450 NILIDGYLSAGKLTKALEL 468



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 156/344 (45%), Gaps = 3/344 (0%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+ ++ N  I    +    D  + + S MA+  + P   + + L+ +         A   
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           LG ++         +V    +L+  + ++GD  +A+ L+  M +  +  D V+YN +ING
Sbjct: 117 LGLIMKRG---FHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVING 173

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C    +  A   F +M      P+ +T++ L++  CK G ++E       + K G+  D
Sbjct: 174 LCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGD 233

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
              Y  +I G C  GDI + +E    ML K+V P    ++ +++   +      A  + D
Sbjct: 234 VFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLD 293

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M    V  +V  +  L    ++ G   DA  +   M+  G  P+  TYN +I   C  G
Sbjct: 294 TMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEG 353

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            +  AL + + M ++G  PD++TY+ L+KG C  G + EA ++ 
Sbjct: 354 RVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLL 397



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 82/180 (45%)

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M   SV P     + +I+ +      S AF +  L++  G   NV+ FN L+    + G 
Sbjct: 85  MASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGD 144

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
              A  L   M  + + PD  +YN +I   C    +  A +L+ EM      P+ +T++ 
Sbjct: 145 SHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSA 204

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           LI G C  G+++E   +  +++ +GL  D   +  L   +    + ++ +++  + L +N
Sbjct: 205 LIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKN 264


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 214/444 (48%), Gaps = 3/444 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + ++I   C   ++G A  +   M Q+G + + +++  L++  C++G +++A  + 
Sbjct: 224 DSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELF 283

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M E    P+  TY   +  +C V +  +AL  F  M  NGI PN  T+ +L+   CK 
Sbjct: 284 FQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKV 343

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + + ++ L  +L   +    S V+    L+D Y K G    A+ + + M    +  + 
Sbjct: 344 GKMDEGMEMLSTML---EKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNS 400

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             YN LI GFC    +  A A   +M +    P+++TYNTL++ LCK   +D A   + +
Sbjct: 401 RTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHL 460

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + K G  PDQ ++   I  LC  G + +A +   S+ EK       ++  +IDGY +   
Sbjct: 461 MIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEK 520

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
            S+A  +   ML  G   N  TFN L+    + G + DA SL   M      P V TY +
Sbjct: 521 FSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTI 580

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI           A    D+M+  G  P+++TYT  IK +C +G + EAEE+  KI+  G
Sbjct: 581 LIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEG 640

Query: 537 LAIDHIPFRILKKRYRRMKESDKA 560
           + +D   + +L   Y  + + D A
Sbjct: 641 ILLDSFIYDVLVNAYGCIGQLDSA 664



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 200/439 (45%), Gaps = 12/439 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I   C  GKI  AL L  +M + G  PDV T+  LV   C++G   +A     EM 
Sbjct: 263 YTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMV 322

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TY   I  +C+V ++D+ + + STM   G+  + V  N L+   CK+G++ 
Sbjct: 323 ENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMME 382

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA+  L  +  +   K   +  T   L+  + +     +A+AL N M++  +  ++V YN
Sbjct: 383 DAICVLDSMKLN---KVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYN 439

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G C    + SA+     M+K GF+PD  T+   ++CLCK GK+++A   +  L + 
Sbjct: 440 TLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEK 499

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
               ++  Y  +I G C       A      ML +   P    +NV++DG  + G + +A
Sbjct: 500 HAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDA 559

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
            S+ D+M  F     V T+  LI    R      A     +M+  G  P+V TY   I A
Sbjct: 560 MSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKA 619

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI-------- 532
            C  G +  A ++  ++   GI  D   Y  L+  +   G +  A  V  ++        
Sbjct: 620 YCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPS 679

Query: 533 -QTLGLAIDHIPFRILKKR 550
            QT  + + H+ F    K 
Sbjct: 680 RQTYSILLKHLIFEKYNKE 698



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 141/570 (24%), Positives = 244/570 (42%), Gaps = 107/570 (18%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E L   + M + G     +E +   +  +I   C  GK+   + +   M++KG V  V+ 
Sbjct: 313 EALKFFEEMVENG-----IEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVP 367

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
            N L++  CK G +E A  V+  M   +  PN  TYN  I G+CR   +D+A+ L + M 
Sbjct: 368 FNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMY 427

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
            N + PN VT+N L+H LCK  ++  A +    ++ D       D  T    +D   K G
Sbjct: 428 ENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDG---FVPDQRTFCAFIDCLCKMG 484

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
              QA  ++  + +K+ + +   Y  LI+G+C     S A   F +ML  G  P+ IT+N
Sbjct: 485 KVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFN 544

Query: 336 TLLNCLCKQGKLDEASHFYGVLSK-----------------------------------T 360
            LL+ L K+GK+++A     V+ K                                   +
Sbjct: 545 VLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISS 604

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  P+ ++Y   I+  C  G +++A E ++ + E+ ++ +  I++V+++ YG  G L +A
Sbjct: 605 GCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSA 664

Query: 421 FSIRDLMLSFGVSSNVFTFNALIL-----AETRGGSIFDAFS------------------ 457
           F +   M   G   +  T++ L+         + G   D  S                  
Sbjct: 665 FGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEI 724

Query: 458 ---LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD--------- 505
              L ++M+  G  P+V TY+ LI   C + H+ LA +L++ M   GI+P          
Sbjct: 725 ITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLS 784

Query: 506 --------------------------IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                                     + +Y  L+ G   +GN ++AEE+F  + + G   
Sbjct: 785 SCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNY 844

Query: 540 DHIPFRILKK---RYRRMKESDKARDIHQK 566
           D + +++L     R   + E  + RDI +K
Sbjct: 845 DEVVWKVLLDGLVRKGYVDECSQLRDIMEK 874



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 190/448 (42%), Gaps = 41/448 (9%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
           T Y R   V+      G I     L + M+  G  P++++ N +VN  CKIG++  A   
Sbjct: 156 TSYNRLFMVLSRF---GLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAY 212

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
              + +     +  TY + I GYC+++EL  A  +F  M   G   N V++  L+H  C+
Sbjct: 213 FCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCE 272

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G +                                       +AL L+  M +     D
Sbjct: 273 VGKID--------------------------------------EALELFFQMKEDGCFPD 294

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           +  Y VL+  FC  G  + A  +F +M++ G  P+V TY  L++  CK GK+DE      
Sbjct: 295 VPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLS 354

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + + G+    + +  +I G C  G +  A   L SM    V P    +N +I G+ R  
Sbjct: 355 TMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKK 414

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            +  A ++ + M    +S N+ T+N LI    +   +  A+ L   M+ DG  PD  T+ 
Sbjct: 415 SMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFC 474

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
             I   C +G +  A Q+++ +  +    +   YT LI G+C      +A  +F ++   
Sbjct: 475 AFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFE 534

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDI 563
           G   + I F +L    R+  + + A  +
Sbjct: 535 GCFPNSITFNVLLDGLRKEGKVEDAMSL 562



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 187/400 (46%), Gaps = 3/400 (0%)

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  V+  ++    S +  +YN       R   +D+   LF  M N+G+ PN ++ N +V
Sbjct: 138 EARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMV 197

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           +A CK G +  A  +   ++         D  T T L+  Y K  +   A  ++  M Q+
Sbjct: 198 NAHCKIGNVVVAKAYFCGLMK---FGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQE 254

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
               + V+Y  LI+GFC  G I  A   F QM + G  PDV TY  L+   C+ GK  EA
Sbjct: 255 GCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEA 314

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
             F+  + + G+ P+  +Y  +I   C  G + +  E L +MLEK +V     +N +IDG
Sbjct: 315 LKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDG 374

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           Y + G + +A  + D M    V  N  T+N LI    R  S+  A +L  +M  + + P+
Sbjct: 375 YCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPN 434

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           + TYN LI   C    +  A +L+  M++ G  PD  T+   I   C  G +++A +VF 
Sbjct: 435 LVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFE 494

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            ++      +   +  L   Y + ++   A  + ++ L  
Sbjct: 495 SLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFE 534



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/449 (24%), Positives = 180/449 (40%), Gaps = 60/449 (13%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC    + +A  L   MI+ G VPD  T    ++ LCK+G +E+A  V   + E 
Sbjct: 440 TLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEK 499

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N   Y A I GYC+  +   A  LF  M   G  PN +T N+L+  L K+G + DA
Sbjct: 500 HAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDA 559

Query: 243 VKFLGEVLADDDGKAT---------------------------------SDVITSTILMD 269
           +  L +V+   D K T                                  +V+T T  + 
Sbjct: 560 MS-LVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIK 618

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
           +Y + G   +A  +   + ++ I  D   Y+VL+N +   G + SAF    +M   G  P
Sbjct: 619 AYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEP 678

Query: 330 DVITYNTLLNCLC-----KQG----------KLDEA-----------SHFYGVLSKTGVA 363
              TY+ LL  L      K+G           +D A           +  +  + + G  
Sbjct: 679 SRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCV 738

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+  +Y  +I+GLC    +  A      M E  + P  +I N ++    + G    A  +
Sbjct: 739 PNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRL 798

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M+ +   +++ ++  L+      G+   A  + + +L  G   D   + +L+     
Sbjct: 799 LDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVR 858

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTEL 512
            G++    QL D M + G      T+T L
Sbjct: 859 KGYVDECSQLRDIMEKTGCRLHSDTHTML 887



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 77/150 (51%)

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
           C     A  + +L+     S +V ++N L +  +R G I +   L K+ML DG+ P++ +
Sbjct: 133 CVSSHEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLIS 192

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +N ++ A C +G++ +A   +  +++ G   D  TYT LI G+C    + +A +VF  + 
Sbjct: 193 FNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMP 252

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDI 563
             G   + + +  L   +  + + D+A ++
Sbjct: 253 QEGCLRNEVSYTNLIHGFCEVGKIDEALEL 282



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 26/166 (15%)

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNV--FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           R G L  A ++R+ M+   VSS+   F  N L   E         FSL            
Sbjct: 115 RNGFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHE---------FSL-----------S 154

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V +YN L       G I     L+ +ML  G+ P++I++  ++  HC  GN+  A+  F 
Sbjct: 155 VTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFC 214

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH----QKWLLRNK 572
            +   G   D   +  L   Y ++ E   A  +     Q+  LRN+
Sbjct: 215 GLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNE 260


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 221/476 (46%), Gaps = 67/476 (14%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+ +G  P++L +N ++N LCK G++  A+ +++++ E   SP+  TY + I G+CR +
Sbjct: 205 RMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 264

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKK----------------GLLGDAVKFL 246
           +LD AL +F+ MA  G  PN VT++ L++ LC                  G+L  A    
Sbjct: 265 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 324

Query: 247 GEVLADDDGKATSD----------------VITSTILM---------------------D 269
           G ++A  D     D                V T T L+                     D
Sbjct: 325 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRD 384

Query: 270 SYFKNGDKFQAL--------------ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
             F N   + AL               + N M +     +IV YN +I G+C+ GD   A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                 ML+RG   +++TYNT++   C  G    A     ++   G  PD+ SY  +I G
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C    +  A      M++  + P    +  +IDGY +   L  A S+ + M   G   N
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           V T+N LI   T+  +   A  L K M+ +GIFP+V TY  +I   C  G   LAL++++
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +M+ +G  P+++TY+ LI+     G ++EAE +FA+++  GL  D I +  + + Y
Sbjct: 625 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAY 680



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 202/422 (47%), Gaps = 3/422 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E +   +  +I  LC  G++  A  L R+MI  G +P   T    +  LC +G  E A  
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  +M      PN  TY A I+G C    L  A+ LF  M+ +G+ PN VT+N L++ L 
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILV 401

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           +   +  A   L   L   +G  + +++T   ++  Y   GD  +A+ + N+M Q+    
Sbjct: 402 ENRRIKYAFVVLN--LMGRNG-CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++V YN +I G+C +G+ +SA      M   G  PD  +Y  L+   CK  K++ A   +
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G+ P++++Y  +I G C    +  A   L  M      P    +NV+I G  + 
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
            + S A  +  +M+  G+  NV T+ A+I    + GS   A  +  +M+  G  P++ TY
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           + LI A    G +  A  L+ E+ R G+ PD ITY ++I+ +   G ++ A     ++  
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698

Query: 535 LG 536
            G
Sbjct: 699 AG 700



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 191/410 (46%), Gaps = 16/410 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+  C  G   +AL +   M   G  PD  ++  L+   CKI  +E A  +  EM +  
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY A I GYC+  +LD A  L   M  +G RPN  T+N+L+H L K+     A 
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L +V+ ++      +V+T T ++D   KNG    AL ++N M ++    +++ Y+ LI
Sbjct: 586 E-LCKVMIEEG--IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
                 G +  A   F ++ + G +PD ITY  ++      GK++ A +F G + K G  
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 702

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC-GDLSNAFS 422
           P   +Y  +I+GL          E+LL+  ++ +   P +      GY     D  +  S
Sbjct: 703 PTLWTYGVLIKGL--------KNEYLLA--DQRLAALPDVVPNCSFGYQTTDQDAVSVMS 752

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
            +   L  G+S  V   NAL+   +  G  F+A  L   M+  G+ PD   YN L+ +  
Sbjct: 753 AKLAELDPGLSVQV--QNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLL 810

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            + ++ LA+ ++  M  +G    +  Y ELI   C     KEA   F  +
Sbjct: 811 RVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENM 860



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 175/374 (46%), Gaps = 3/374 (0%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            Y+A +    R+      +  +  M + G++PN + +N +++ALCK G + DA   + +V
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
               + + + D  T T ++  + +  D   AL ++N M ++  + + V Y+ LING C +
Sbjct: 242 F---ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDS 298

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G ++ AF    +M+  G LP   T    +  LC  G  ++A   +  +   G  P+  +Y
Sbjct: 299 GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 358

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             +I GLC+ G +  A      M    V P    +N +I+       +  AF + +LM  
Sbjct: 359 TALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGR 418

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G S N+ T+N +I      G    A  +   ML  G   ++ TYN +I   C+ G+   
Sbjct: 419 NGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTS 478

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           AL++ D M   G  PD  +YTELI G C    M+ A  +F ++   GL  + + +  L  
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538

Query: 550 RYRRMKESDKARDI 563
            Y + ++ D A  +
Sbjct: 539 GYCKDEKLDTATSL 552



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 135/308 (43%), Gaps = 35/308 (11%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           + ++  + + Q  ++  + AY+ L+      G  ++    + +ML  G  P+++ YN ++
Sbjct: 163 RTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVI 222

Query: 339 NCLCKQGK-----------------------------------LDEASHFYGVLSKTGVA 363
           N LCK G                                    LD A   +  ++K G  
Sbjct: 223 NALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCE 282

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y T+I GLC  G + +A + +  M+   ++P  H     I      G   +A+ +
Sbjct: 283 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 342

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M + G   NV+T+ ALI      G +  A  L   M  DG+FP+  TYN LI     
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVE 402

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              I  A  + + M R G +P+I+TY E+IKG+C  G+ K+A  V   +   G + + + 
Sbjct: 403 NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462

Query: 544 FRILKKRY 551
           +  + K Y
Sbjct: 463 YNTIIKGY 470



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 135/318 (42%), Gaps = 20/318 (6%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  LC  G    AL +  KMI++G +P++LT++ L+  L + G +E+A+++  E+ 
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  TY   I  Y    +++ A +    M   G +P   T+ +L+  L  + L  
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL-- 720

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
                    LAD    A  DV+ +       ++  D+     +   + + +    +   N
Sbjct: 721 ---------LADQRLAALPDVVPNCSF---GYQTTDQDAVSVMSAKLAELDPGLSVQVQN 768

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L++     G    A      M+ +G  PD   YN+LL  L +   +D A   +  +S  
Sbjct: 769 ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 828

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR------C 414
           G       YK +I  LC      +AR    +ML ++  P+  +  V+IDG  R      C
Sbjct: 829 GCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLC 888

Query: 415 GDLSNAFSIRDLMLSFGV 432
            +  +    R  M SF +
Sbjct: 889 MEFLHIMETRRYMPSFHI 906



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 66/131 (50%)

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           ++   S  D++   G+   +F ++AL++  +R G           ML +G+ P++  YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +I A C  G++  A  +  ++    ++PD  TYT +I GHC + ++  A +VF ++   G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 537 LAIDHIPFRIL 547
              + + +  L
Sbjct: 281 CEPNTVTYSTL 291


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 204/396 (51%), Gaps = 3/396 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A  L   M++ G  PDV T N L++ LCK G++++++ ++ ++ +     N  T+N FI 
Sbjct: 200 AYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQ 259

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G CR   L  A+ +  ++   G+ P+ VT+N L+  LCK   + +A K+L +++   +G 
Sbjct: 260 GLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLV---NGG 316

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D  T   L+D Y K G    A  +      K    D   Y  LING C N +I  A 
Sbjct: 317 LEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRAL 376

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           A F   L +G  P VI YN L+  LC++G + +A      +S+ G + D  +Y  +I GL
Sbjct: 377 ALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGL 436

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G +  A   +   + K  VP+   +N +IDGY +   +     I + M S GV+ +V
Sbjct: 437 CKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDV 496

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+N+++   ++     D     + M+  G  P+  TYN+L  + C  G ++ AL L DE
Sbjct: 497 ITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDE 556

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           +L +GITPD +++  +I G    G++K A ++F ++
Sbjct: 557 ILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM 592



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 213/442 (48%), Gaps = 5/442 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  L   G    A  +  +M   G VPDV T    +   C+      A  ++  M   
Sbjct: 116 AIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQ 175

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N   Y   + G+   N   +A  LF+ M   GI P+  T N L+H LCKKG + ++
Sbjct: 176 GCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQES 235

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +VL        S++ T  I +    + G    A+++ + + ++ +  D+V YN L
Sbjct: 236 ERLLNKVLKKG---MCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTL 292

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH-FYGVLSKTG 361
           I G C N ++  A  Y  +++  G  PD  TYNTL++  CK G L  A     G + K G
Sbjct: 293 ICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICK-G 351

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             PD+ +Y ++I GLC + +I +A     + L K + P   ++N++I G  + G +  A 
Sbjct: 352 FVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQAL 411

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + + M   G SS+++T+N +I    + G + DA +L  + +  G  PDVFT+N LI   
Sbjct: 412 QMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGY 471

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C    +   +Q+ ++M   G+TPD+ITY  ++ G       ++  E F  +   G   + 
Sbjct: 472 CKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNK 531

Query: 542 IPFRILKKRYRRMKESDKARDI 563
           I + IL +   +  + ++A D+
Sbjct: 532 ITYNILTESLCKAGKVNEALDL 553



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 207/420 (49%), Gaps = 4/420 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  L  D   +  +I  LC    +  A     K++  G  PD  T+N L++  CK+G L
Sbjct: 278 IREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGML 337

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           + A+ +++        P+  TY + I G C+ +E+D+AL LF+     G++P  + +N+L
Sbjct: 338 QNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNML 397

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LC++GL+  A++ + E+    +   +SD+ T  ++++   K G    A  L ND   
Sbjct: 398 IKGLCQEGLILQALQMMNEM---SENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIA 454

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K    D+  +N LI+G+C    + +      +M   G  PDVITYN++LN L K  K ++
Sbjct: 455 KGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNED 514

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
               +  + + G  P++I+Y  + + LC  G + +A + +  +L K + P+   +  II 
Sbjct: 515 LMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIIS 574

Query: 410 GYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           G+   GDL  A+ + R +   + VS    T+N +I A      +     L  EM   G  
Sbjct: 575 GFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCA 634

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PD +TY ++I   C  G+     +   EM+ +G  P + T+  +I   C +  + EA ++
Sbjct: 635 PDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDI 694



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 211/439 (48%), Gaps = 4/439 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           ++  ++     GK+  A+ +  +M      P VL++N ++N L + G  ++A  V   M 
Sbjct: 79  YIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMK 138

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            +   P+  T+   I  +CR      AL L + M + G + N V +  +V    ++    
Sbjct: 139 NVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRV 198

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +   ++L         DV T   L+ +  K G+  ++  L N + +K + +++  +N
Sbjct: 199 EAYELFNDMLRIG---IFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFN 255

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           + I G C  G +S A +    +++ G  PDV+TYNTL+  LCK   + EA  +   L   
Sbjct: 256 IFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNG 315

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ PD  +Y T+I G C  G +  A + L   + K  VP+   +  +I+G  +  ++  A
Sbjct: 316 GLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRA 375

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
            ++ +  L  G+   V  +N LI    + G I  A  +  EM  +G   D++TYNL+I  
Sbjct: 376 LALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVING 435

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C +G +  A  L ++ + +G  PD+ T+  LI G+C +  M+   ++  K+ + G+  D
Sbjct: 436 LCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPD 495

Query: 541 HIPFR-ILKKRYRRMKESD 558
            I +  +L    + +K  D
Sbjct: 496 VITYNSVLNGLSKAVKNED 514



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 200/435 (45%), Gaps = 41/435 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA----DHVIREM 179
           ++  LC  G++  +  L  K+++KG   ++ T N  +  LC+ G L  A    D VIRE 
Sbjct: 222 LLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIRE- 280

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
                +P+  TYN  I G C+ + + +A      + N G+ P+  T+N L+   CK G+L
Sbjct: 281 ---GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGML 337

Query: 240 GDAVKFL--------------------GEVLADDDGKATS------------DVITSTIL 267
            +A K L                    G    D+  +A +             VI   +L
Sbjct: 338 QNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNML 397

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +    + G   QAL + N+M +    +DI  YN++ING C  G +S A       + +G+
Sbjct: 398 IKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGY 457

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +PDV T+NTL++  CKQ K++        +   GV PD I+Y +++ GL          E
Sbjct: 458 VPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLME 517

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
              +M+EK  VP    +N++ +   + G ++ A  + D +L+ G++ +  +F  +I    
Sbjct: 518 TFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFA 577

Query: 448 RGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
             G +  A+ L + M     +     TYN++I A      +H+  +L+ EM   G  PD 
Sbjct: 578 NNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDT 637

Query: 507 ITYTELIKGHCARGN 521
            TY  +I G C  GN
Sbjct: 638 YTYRVMIDGFCITGN 652



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 192/402 (47%), Gaps = 4/402 (0%)

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           G +++A  V   M      P+  +YNA +          +A  +F  M N GI P+  T 
Sbjct: 90  GKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTF 149

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
            I + + C+      A++ L  +++   G   + V   T++   Y +N  + +A  L+ND
Sbjct: 150 TIRIKSFCRTKRPHSALRLLNNMVSQ--GCQLNAVAYCTVVAGFYEEN-YRVEAYELFND 206

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +  I  D+  +N L++  C  G++  +     ++LK+G   ++ T+N  +  LC++G 
Sbjct: 207 MLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGM 266

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           L  A      + + G+ PD ++Y T+I GLC + ++V+A ++L  ++   + P+   +N 
Sbjct: 267 LSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNT 326

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +IDGY + G L NA  I    +  G   + FT+ +LI    +   I  A +L    L  G
Sbjct: 327 LIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKG 386

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           + P V  YN+LI   C  G I  ALQ+ +EM   G + DI TY  +I G C  G + +A 
Sbjct: 387 LKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDAN 446

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRY-RRMKESDKARDIHQKW 567
            +       G   D   F  L   Y +++K     + +++ W
Sbjct: 447 NLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMW 488



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 140/304 (46%), Gaps = 6/304 (1%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           L  L+ M +     C+  +D   +  VI  LC  G +  A  L    I KG VPDV T N
Sbjct: 408 LQALQMMNEMSENGCS--SDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFN 465

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            L++  CK   +E    ++ +M     +P+  TYN+ + G  +  + +  +  F TM   
Sbjct: 466 TLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEK 525

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G  PN++T+NIL  +LCK G + +A+  + E+L   +   T D ++   ++  +  NGD 
Sbjct: 526 GCVPNKITYNILTESLCKAGKVNEALDLVDEIL---NKGITPDTVSFATIISGFANNGDL 582

Query: 278 FQALALWNDMF-QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             A  L+  M  Q  +      YN++IN F    D+      F +M   G  PD  TY  
Sbjct: 583 KGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRV 642

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           +++  C  G  D    F   + + G  P   ++  +I  LC+   + +A + +  M+   
Sbjct: 643 MIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNG 702

Query: 397 VVPE 400
           +VPE
Sbjct: 703 IVPE 706



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 158/356 (44%), Gaps = 3/356 (0%)

Query: 206 KALHLFSTMA-NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           KAL +F+ +   +G + + +T+  ++  L   G        L E   D D      V   
Sbjct: 22  KALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYIG 81

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
              M SY + G   +A+ ++  M   N +  +++YN ++N    +G    A   F +M  
Sbjct: 82  A--MKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKN 139

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G +PDV T+   +   C+  +   A      +   G   + ++Y T++ G       V+
Sbjct: 140 VGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVE 199

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A E    ML   + P+   +N ++    + G++  +  + + +L  G+ SN+FTFN  I 
Sbjct: 200 AYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQ 259

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              R G +  A S+   ++ +G+ PDV TYN LI   C   ++  A +   +++  G+ P
Sbjct: 260 GLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEP 319

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           D  TY  LI G+C  G ++ AE++       G   D   +  L     +  E D+A
Sbjct: 320 DGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRA 375


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/415 (32%), Positives = 206/415 (49%), Gaps = 8/415 (1%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R+M   G  PDV   N+++  L      +    V  EM ++   P+  TYN  +  + + 
Sbjct: 158 REMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKE 217

Query: 202 NELDKALHLFSTMAN--NGIRPNRVTHNILVHALCKKGLLGDAVKFL-GEVLADDDGKAT 258
              DK   L   M    +G  PN VT+N+++  L +KG L +A + + G  L+      T
Sbjct: 218 GRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFT 277

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            + + + +L     K     Q      +M  + I   +V YN +I+G   +G + +A   
Sbjct: 278 YNPLITGLLARGCVKKVYDLQL-----EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 332

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           F +M   G LPDVITYN+LLN  CK G L EA   +G L + G+AP  ++Y   I G C 
Sbjct: 333 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCR 392

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            GD+ +AR     M E+  +P    + +++ G      L+ A    D MLS G+  + F 
Sbjct: 393 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFA 452

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N  I AE   G I  A  L++ ++L+GI  D  TYN+LI   C  G++  A +L  +M+
Sbjct: 453 YNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMV 512

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
             G+ PD ITYT LI  HC RG ++EA ++F  + + GL    + F ++   Y R
Sbjct: 513 SNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCR 567



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 210/439 (47%), Gaps = 39/439 (8%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G +P+ +T+N ++  L + GDLE+A  ++  M  +    +  TYN  ITG      + K 
Sbjct: 236 GCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKV 294

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M N GI P  VT+N ++H L + GL+  A     E+ A        DVIT   L
Sbjct: 295 YDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMG---LLPDVITYNSL 351

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF----------- 316
           ++ Y K G+  +AL L+ D+ +  +   ++ YN+ I+G+C  GD+  A            
Sbjct: 352 LNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGC 411

Query: 317 ------------------------AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
                                    +F +ML +G  PD   YNT +      G +  A  
Sbjct: 412 LPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALE 471

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
              VL   G++ D ++Y  +I GLC  G++  A+E  + M+   + P+   +  +I  + 
Sbjct: 472 LREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHC 531

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
             G L  A  I + M+S G+  +  TF  +I A  R G+++ A+   ++ML +G+ P+  
Sbjct: 532 ERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEI 591

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TYN+LI A C +G   LA   + EML RG+  +  TYT LI G+C  GN ++A   + ++
Sbjct: 592 TYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEM 651

Query: 533 QTLGLAIDHIPFRILKKRY 551
              G+  D++  + L K +
Sbjct: 652 HQNGIHPDYLTHKALVKGF 670



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 224/440 (50%), Gaps = 12/440 (2%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS---PNCATYNAFIT 196
           +  +M+Q G  P ++T+N L++   K G  +K   +++EM E R S   PN  TYN  IT
Sbjct: 191 VHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEM-ETRGSGCLPNDVTYNVVIT 249

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G  R  +L++A  L   M  +  + +  T+N L+  L  +G +        E+  +++G 
Sbjct: 250 GLTRKGDLEEAAELVEGMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEM--ENEGI 306

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
             + V+T   ++    ++G    A   + +M    +  D++ YN L+NG+C  G++  A 
Sbjct: 307 MPT-VVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEAL 365

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F  + + G  P V+TYN  ++  C+ G L+EA      + + G  P+  +Y  +++G 
Sbjct: 366 LLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGS 425

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
                +  AREF   ML K + P+   +N  I      GD++ A  +R++++  G+SS+ 
Sbjct: 426 LNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDT 485

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+N LI    + G++ DA  L+ +M+ +G+ PD  TY  LI A C  G +  A ++++ 
Sbjct: 486 VTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNN 545

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M+  G+ P  +T+T +I  +C RGN+  A   F K+   G+  + I + +L     RM  
Sbjct: 546 MISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGR 605

Query: 557 SDKA----RDIHQKWLLRNK 572
           +  A     ++ ++ L+ NK
Sbjct: 606 TQLASHHFHEMLERGLVANK 625



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 125/234 (53%), Gaps = 3/234 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+ KG  PD   +N  +     +GD+ +A  +   +     S +  TYN  I G C+  
Sbjct: 440 EMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTG 499

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            L  A  L   M +NG++P+ +T+  L+HA C++GLL +A K    +++D         +
Sbjct: 500 NLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDG---LLPSAV 556

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T T+++ +Y + G+ + A   +  M ++ ++ + + YNVLI+  C  G    A  +F +M
Sbjct: 557 TFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEM 616

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           L+RG + +  TY  L++  CK G  ++A  FY  + + G+ PD +++K +++G 
Sbjct: 617 LERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 5/196 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G +  A  L+ KM+  G  PD +T+  L++  C+ G L +A  +   M    
Sbjct: 491 LIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDG 550

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T+   I  YCR   L  A   F  M   G+ PN +T+N+L+HALC+ G    A 
Sbjct: 551 LLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAS 610

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+L   +    ++  T T+L+D   K G+   A+  + +M Q  I  D + +  L+
Sbjct: 611 HHFHEML---ERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALV 667

Query: 304 NGFCLNGDISSAFAYF 319
            GF  +G +     Y 
Sbjct: 668 KGF--DGHVHHTIEYL 681


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 217/424 (51%), Gaps = 3/424 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C+  + G A+ +  KM   G  PD +T+N +++ LCK G L +A  ++ +M    
Sbjct: 203 LIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKG 262

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T+N  + G CR+  L +A ++   M+ N + P+  T+N+++   CK+G + +A+
Sbjct: 263 LFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAM 322

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+   ++ K + DV+T   L++  F++G   +   L  +M  + ++ + V YNV++
Sbjct: 323 RLREEM---ENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMV 379

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
             F   G +        +M + G LPD++TYNTL++  CK GK+DEA      + + G+ 
Sbjct: 380 KWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLK 439

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D ++  T+++ LC    + +A + L S   +    +   +  +I GY +    S A  +
Sbjct: 440 MDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRL 499

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M    +  ++ T+N++I    + G    A     E+L  G+ PD  TYN +I   C 
Sbjct: 500 WDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQ 559

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A Q +++M+ +   PD++T   L+ G C  G +++A ++F    + G  +D + 
Sbjct: 560 EGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVS 619

Query: 544 FRIL 547
           +  +
Sbjct: 620 YNTI 623



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 204/445 (45%), Gaps = 12/445 (2%)

Query: 94  LKENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           L E  D L  M++ G  P R T          ++   C  G +  A  +   M Q   VP
Sbjct: 248 LNEARDLLLDMKNKGLFPNRTTFNI-------LVVGCCRLGWLKEAANVIELMSQNSVVP 300

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D  T+N +++  CK G + +A  +  EM  ++ SP+  TYN  I G       ++   L 
Sbjct: 301 DAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLI 360

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M   G++PN VT+N++V    KKG + +  K + ++   ++     D++T   L+  +
Sbjct: 361 EEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKM---EESGCLPDIVTYNTLISWH 417

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K G   +A  L ++M +K ++ D V  N ++   C    +  A    C   +RG+  D 
Sbjct: 418 CKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDE 477

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           ++Y TL+    K  K  +A   +  + +  + P  I+Y ++I GLC  G   +A + L  
Sbjct: 478 VSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDE 537

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           +LE  +VP+   +N II GY + G +  AF   + M+      +V T N L+    + G 
Sbjct: 538 LLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGM 597

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           +  A  L    +  G   D  +YN +I + C       A  L +EM  + + PD  TY  
Sbjct: 598 LEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNA 657

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLG 536
           ++ G    G MK+AEE  +KI   G
Sbjct: 658 ILGGLTDAGRMKDAEEFISKIAEKG 682



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 158/333 (47%), Gaps = 38/333 (11%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L  +M  +G  P+ +T+N +V    K G +++ D  +R+M E    P+  TYN  I+ +C
Sbjct: 359 LIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHC 418

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +V ++D+A  L   M   G++ + VT N ++ ALC++  L +A   L    A   G    
Sbjct: 419 KVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCS--ARRRGYFVD 476

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN------------------- 300
           +V   T+++  YFK+    QAL LW++M +K I   I+ YN                   
Sbjct: 477 EVSYGTLII-GYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKL 535

Query: 301 ----------------VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
                            +I+G+C  G +  AF +  +M+++ F PDV+T NTLL  LCK+
Sbjct: 536 DELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKE 595

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
           G L++A   +      G   D +SY TII  LC      +A + L  M EK + P+ + +
Sbjct: 596 GMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTY 655

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
           N I+ G    G + +A      +   G S N F
Sbjct: 656 NAILGGLTDAGRMKDAEEFISKIAEKGKSENQF 688



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 185/445 (41%), Gaps = 45/445 (10%)

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE-----LDKALHLFSTMANNGIRP 221
           G   +A  +   M  +   P   T N  +    R        L KA+  F+     G++ 
Sbjct: 138 GRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAV--FTDFIKIGVKI 195

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           N  + NIL+H  C +   G+A++ LG++    D     D IT   ++D   K G   +A 
Sbjct: 196 NTNSFNILIHGSCMENRFGEAIRVLGKM---RDYGCPPDNITYNTILDGLCKKGRLNEAR 252

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            L  DM  K +  +   +N+L+ G C  G +  A      M +   +PD  TYN +++  
Sbjct: 253 DLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGF 312

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CKQG++ EA      +    ++PD ++Y T+I G   HG   +  + +  M  + + P  
Sbjct: 313 CKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNS 372

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +NV++  + + G +         M   G   ++ T+N LI    + G + +AF L  E
Sbjct: 373 VTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDE 432

Query: 462 MLLDGIFPDVFTYNLLIGASC---NLGHIH------------------------------ 488
           M   G+  D  T N ++ A C    L   H                              
Sbjct: 433 MGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEK 492

Query: 489 --LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
              AL+L+DEM  + I P IITY  +I G C  G   +A +   ++   GL  D I +  
Sbjct: 493 ASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNT 552

Query: 547 LKKRYRRMKESDKARDIHQKWLLRN 571
           +   Y +  + +KA   H K + +N
Sbjct: 553 IIHGYCQEGQVEKAFQFHNKMVEKN 577



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 3/298 (1%)

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING---FCLNGDISSAFAYFCQM 322
           I + +Y   G   QA  ++N M +  +Q  ++  N L+N    F  +  I  + A F   
Sbjct: 129 ISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDF 188

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           +K G   +  ++N L++  C + +  EA    G +   G  PD I+Y TI+ GLC  G +
Sbjct: 189 IKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRL 248

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +AR+ LL M  K + P    +N+++ G  R G L  A ++ +LM    V  + +T+N +
Sbjct: 249 NEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVM 308

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    + G I +A  L++EM    + PDV TYN LI      G      +L +EM  RG+
Sbjct: 309 ISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGM 368

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            P+ +TY  ++K    +G M E ++   K++  G   D + +  L   + ++ + D+A
Sbjct: 369 KPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEA 426



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 26/237 (10%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K   AL L  +M +K  +P ++T+N ++  LC++G   +A   + E+ E    P+  TYN
Sbjct: 492 KASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYN 551

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I GYC+  +++KA    + M     +P+ VT N L+  LCK+G+L  A+K     ++ 
Sbjct: 552 TIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISK 611

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
             GK    V  +TI++ S  K     +A  L  +M +K +  D   YN ++ G    G +
Sbjct: 612 --GKDVDAVSYNTIIL-SLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRM 668

Query: 313 SSAFAYFCQMLKRG-----FL------------------PDVITYNTLLNCLCKQGK 346
             A  +  ++ ++G     FL                  P+ I Y+  +N LC QG+
Sbjct: 669 KDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCSQGR 725



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 40/163 (24%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           + +D+L  + ++G     L  D   +  +I   C  G++  A     KM++K   PDV+T
Sbjct: 530 QAIDKLDELLESG-----LVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVT 584

Query: 156 HNYLVNELCKIGDLEKA--------------DHV---------------------IREMS 180
            N L+  LCK G LEKA              D V                     + EM 
Sbjct: 585 CNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEME 644

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           E +  P+C TYNA + G      +  A    S +A  G   N+
Sbjct: 645 EKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQ 687


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 221/476 (46%), Gaps = 67/476 (14%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+ +G  P++L +N ++N LCK G++  A+ +++++ E   SP+  TY + I G+CR +
Sbjct: 205 RMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 264

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKK----------------GLLGDAVKFL 246
           +LD AL +F+ MA  G  PN VT++ L++ LC                  G+L  A    
Sbjct: 265 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 324

Query: 247 GEVLADDDGKATSD----------------VITSTILM---------------------D 269
           G ++A  D     D                V T T L+                     D
Sbjct: 325 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 384

Query: 270 SYFKNGDKFQAL--------------ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
             F N   + AL               + N M +     +IV YN +I G+C+ GD   A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                 ML+RG   +++TYNT++   C  G    A     ++   G  PD+ SY  +I G
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C    +  A      M++  + P    +  +IDGY +   L  A S+ + M   G   N
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           V T+N LI   T+  +   A  L K M+ +GIFP+V TY  +I   C  G   LAL++++
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +M+ +G  P+++TY+ LI+     G ++EAE +FA+++  GL  D I +  + + Y
Sbjct: 625 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAY 680



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 202/422 (47%), Gaps = 3/422 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E +   +  +I  LC  G++  A  L R+MI  G +P   T    +  LC +G  E A  
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  +M      PN  TY A I+G C    L  A+ LF  M+ +G+ PN VT+N L++ L 
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 401

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           +   +  A   L   L   +G  + +++T   ++  Y   GD  +A+ + N+M Q+    
Sbjct: 402 ENRRIKYAFVVLN--LMGRNG-CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++V YN +I G+C +G+ +SA      M   G  PD  +Y  L+   CK  K++ A   +
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G+ P++++Y  +I G C    +  A   L  M      P    +NV+I G  + 
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
            + S A  +  +M+  G+  NV T+ A+I    + GS   A  +  +M+  G  P++ TY
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           + LI A    G +  A  L+ E+ R G+ PD ITY ++I+ +   G ++ A     ++  
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698

Query: 535 LG 536
            G
Sbjct: 699 AG 700



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 191/410 (46%), Gaps = 16/410 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+  C  G   +AL +   M   G  PD  ++  L+   CKI  +E A  +  EM +  
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY A I GYC+  +LD A  L   M  +G RPN  T+N+L+H L K+     A 
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L +V+ ++      +V+T T ++D   KNG    AL ++N M ++    +++ Y+ LI
Sbjct: 586 E-LCKVMIEEG--IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
                 G +  A   F ++ + G +PD ITY  ++      GK++ A +F G + K G  
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 702

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC-GDLSNAFS 422
           P   +Y  +I+GL          E+LL+  ++ +   P +      GY     D  +  S
Sbjct: 703 PTLWTYGVLIKGL--------KNEYLLA--DQRLAALPDVVPNCSFGYQTTDQDAVSVMS 752

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
            +   L  G+S  V   NAL+   +  G  F+A  L   M+  G+ PD   YN L+ +  
Sbjct: 753 AKLAELDPGLSVQV--QNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLL 810

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            + ++ LA+ ++  M  +G    +  Y ELI   C     KEA   F  +
Sbjct: 811 RVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENM 860



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 175/374 (46%), Gaps = 3/374 (0%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            Y+A +    R+      +  +  M + G++PN + +N +++ALCK G + DA   + +V
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
               + + + D  T T ++  + +  D   AL ++N M ++  + + V Y+ LING C +
Sbjct: 242 F---ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDS 298

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G ++ AF    +M+  G LP   T    +  LC  G  ++A   +  +   G  P+  +Y
Sbjct: 299 GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 358

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             +I GLC+ G +  A      M    V P    +N +I+       +  AF + +LM  
Sbjct: 359 TALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGR 418

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G S N+ T+N +I      G    A  +   ML  G   ++ TYN +I   C+ G+   
Sbjct: 419 NGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTS 478

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           AL++ D M   G  PD  +YTELI G C    M+ A  +F ++   GL  + + +  L  
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538

Query: 550 RYRRMKESDKARDI 563
            Y + ++ D A  +
Sbjct: 539 GYCKDEKLDTATSL 552



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 135/308 (43%), Gaps = 35/308 (11%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           + ++  + + Q  ++  + AY+ L+      G  ++    + +ML  G  P+++ YN ++
Sbjct: 163 RTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVI 222

Query: 339 NCLCKQGK-----------------------------------LDEASHFYGVLSKTGVA 363
           N LCK G                                    LD A   +  ++K G  
Sbjct: 223 NALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCE 282

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y T+I GLC  G + +A + +  M+   ++P  H     I      G   +A+ +
Sbjct: 283 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 342

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M + G   NV+T+ ALI      G +  A  L   M  DG+FP+  TYN LI     
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVE 402

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              I  A  + + M R G +P+I+TY E+IKG+C  G+ K+A  V   +   G + + + 
Sbjct: 403 NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462

Query: 544 FRILKKRY 551
           +  + K Y
Sbjct: 463 YNTIIKGY 470



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 137/318 (43%), Gaps = 20/318 (6%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  LC  G    AL +  KMI++G +P++LT++ L+  L + G +E+A+++  E+ 
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  TY   I  Y    +++ A +    M   G +P   T+ +L+     KGL  
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI-----KGLKN 717

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +       +LAD    A  DV+ +       ++  D+     +   + + +    +   N
Sbjct: 718 EY------LLADQRLAALPDVVPNCSFG---YQTTDQDAVSVMSAKLAELDPGLSVQVQN 768

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L++     G    A      M+ +G  PD   YN+LL  L +   +D A   +  +S  
Sbjct: 769 ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 828

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR------C 414
           G       YK +I  LC      +AR    +ML ++  P+  +  V+IDG  R      C
Sbjct: 829 GCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLC 888

Query: 415 GDLSNAFSIRDLMLSFGV 432
            +  +    R  M SF +
Sbjct: 889 MEFLHIMETRRYMPSFHI 906



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 66/131 (50%)

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           ++   S  D++   G+   +F ++AL++  +R G           ML +G+ P++  YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +I A C  G++  A  +  ++    ++PD  TYT +I GHC + ++  A +VF ++   G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 537 LAIDHIPFRIL 547
              + + +  L
Sbjct: 281 CEPNTVTYSTL 291


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 228/457 (49%), Gaps = 3/457 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   + ++I  LC    +  A+ + + M  KG +PD  T+N ++   C +G LE+A 
Sbjct: 231 LPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAV 290

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++++MS     P+  TY+  I  YC++    +A  +F +M   G +PN   ++IL+H  
Sbjct: 291 RLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGY 350

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
             KG L D    L  ++ D       +     IL+ +Y K+G   +A+  + +M Q  ++
Sbjct: 351 ATKGALIDVRDLLDLMIRDG---IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLR 407

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+V+Y+ +I+  C  G +  A  +F QM+  G  P++I++ +L++ LC  G+  +    
Sbjct: 408 PDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEEL 467

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+ PD I   TI+  LC  G +V+A++F   ++   V P+   +N +IDGY  
Sbjct: 468 AFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCF 527

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G +  +    D M+S G+  + +T+N+L+    + G + DA +L +EM    +     T
Sbjct: 528 VGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAIT 587

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            N+++      G I  A +LY +M+ RG    I TY  ++ G C    + EA  +F  ++
Sbjct: 588 SNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLR 647

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +    +D   F I+     ++   D+A+ +    +LR
Sbjct: 648 SKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLR 684



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 202/407 (49%), Gaps = 1/407 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L   M++ G          L+   C +G L+ A        +        T N  I 
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 197 GYCRVNELDKALHL-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
           G C  N  D A+ + F  M   G  P+  ++N L+  LC +    +A++ L  + AD   
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
             + +V++   ++D +FK G+  +A  L+++M  + +  D+V YN LI+G C    +  A
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
            A    M  +G +PD  TYN ++   C  G+L+EA      +S +G+ PD ++Y  +IQ 
Sbjct: 255 VAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQY 314

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C  G   +AR    SM+ K   P   I+++++ GY   G L +   + DLM+  G+   
Sbjct: 315 YCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFE 374

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
              FN LI A  + G++  A +   EM  +G+ PDV +Y+ +I   C  G +  A+  ++
Sbjct: 375 HRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFN 434

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           +M+  G++P+II++T LI G C+ G  K+ EE+  ++   G+  D I
Sbjct: 435 QMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAI 481



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 221/510 (43%), Gaps = 74/510 (14%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D R +  +IR  C  G++  A+ L +KM   G  PDV+T++ L+   CKIG   +A  V 
Sbjct: 269 DTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVF 328

Query: 177 REMSEMRPSPNCATY-----------------------------------NAFITGYCRV 201
             M      PN   Y                                   N  I  Y + 
Sbjct: 329 DSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKH 388

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV----KFLGEVLADDDGKA 257
             +DKA+  F+ M  NG+RP+ V+++ ++H LCK G + DAV    + + E L+ +    
Sbjct: 389 GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISF 448

Query: 258 TS----------------------------DVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           TS                            D I    +MD+  K G   +A   ++ +  
Sbjct: 449 TSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH 508

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             ++ D+V+YN LI+G+C  G +  +     +M+  G  PD  TYN+LLN   K G++++
Sbjct: 509 IGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVED 568

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   Y  + +  V    I+   ++ GL   G IV ARE  + M+++        +N ++ 
Sbjct: 569 ALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLG 628

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G      +  A  + + + S     +V TF+ +I A  + G I +A SL   M+L G  P
Sbjct: 629 GLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVP 688

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           DV TY+L+I +    G +  +  L+  M + G   D      +++    +G+++ A    
Sbjct: 689 DVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYL 748

Query: 530 AKIQTLGLAIDH------IPFRILKKRYRR 553
            KI     +++       IP  + +K+Y++
Sbjct: 749 TKIDEKNFSLEASTAALLIPI-VSEKKYQK 777



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 139/276 (50%), Gaps = 4/276 (1%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A++L+N M +  +        +LI  FC  G +  AFA F   LK G+    +T N L+ 
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 340 CLCKQGKLDEA-SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK--- 395
            LC   + D+A    +  + + G  PD  SY  +I+GLC+     +A E L+ M      
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
           +  P    +N +IDG+ + G++  A+ +   M+  G+  +V T+N+LI    +  ++  A
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            ++ + M   G+ PD  TYN++I   C+LG +  A++L  +M   G+ PD++TY+ LI+ 
Sbjct: 255 VAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQY 314

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +C  G   EA  VF  +   G   +   + IL   Y
Sbjct: 315 YCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGY 350



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 128/268 (47%), Gaps = 4/268 (1%)

Query: 297 VAYNVLINGFCLNGDISSAF-AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           V  N LI G C       A    F +M + G+ PDV +YN L+  LC + K  EA     
Sbjct: 127 VTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLI 186

Query: 356 VLSKTG---VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            ++  G    +P+ +SY T+I G    G++ KA      M+ + + P+   +N +IDG  
Sbjct: 187 HMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLC 246

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +   +  A +I   M   GV  +  T+N +I      G + +A  L K+M   G+ PDV 
Sbjct: 247 KAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVV 306

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY+LLI   C +G    A  ++D M+R+G  P+   Y  L+ G+  +G + +  ++   +
Sbjct: 307 TYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 366

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKA 560
              G+  +H  F IL   Y +    DKA
Sbjct: 367 IRDGIPFEHRAFNILICAYAKHGAVDKA 394



 Score = 46.2 bits (108), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 4/132 (3%)

Query: 438 TFNALILAETRGGSIFDAFSLK-KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           T N LI     G    DA  +  + M   G  PDVF+YN LI   C       AL+L   
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIH 187

Query: 497 MLRRG---ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           M   G    +P++++Y  +I G    G + +A  +F ++   GL  D + +  L     +
Sbjct: 188 MTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCK 247

Query: 554 MKESDKARDIHQ 565
            +  DKA  I Q
Sbjct: 248 AQAMDKAVAILQ 259


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 225/444 (50%), Gaps = 3/444 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  L   G +  A  + +++ + G   +V T N +VN LCK G +EK    + E+ E 
Sbjct: 195 ALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEK 254

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  I+ Y     +++A  L   M + G  P   T+N +++ LCK G    A
Sbjct: 255 GVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERA 314

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +   E+L    G +       ++LM++  K GD  +   +++DM  +++  D+V ++ +
Sbjct: 315 KEVFAEMLRS--GLSPDSTTYRSLLMEAC-KKGDAVETENIFSDMRSRDVVPDLVCFSSM 371

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++ F  +G++  A  YF  + + G +PD + Y  L+   C++G + EA +    + + G 
Sbjct: 372 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGC 431

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           A D ++Y TI+ GLC    + +A +    M E+ + P+ +   ++IDG+ + G+L NA  
Sbjct: 432 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAME 491

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M    +  +V T+N L+    + G I  A  +  +M+   I P   ++++L+ A C
Sbjct: 492 LFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALC 551

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           + GH+  A +++DEM+ + I P ++    +IKG+C  GN  + E    K+ + G   D I
Sbjct: 552 SKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCI 611

Query: 543 PFRILKKRYRRMKESDKARDIHQK 566
            +  L   + + +   KA  + +K
Sbjct: 612 SYNTLIYGFVKEENMSKAFGLVKK 635



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 224/484 (46%), Gaps = 40/484 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  GK+        ++ +KG  PD++T+N L++     G +E+A  ++  M    
Sbjct: 231 MVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKG 290

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP   TYN  I G C+  + ++A  +F+ M  +G+ P+  T+  L+   CKKG   +  
Sbjct: 291 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETE 350

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               ++ + D      D++  + +M  + ++G+  +AL  +N + +  +  D V Y +LI
Sbjct: 351 NIFSDMRSRD---VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 407

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G+C  G IS A     +ML++G   DV+TYNT+L+ LCK+  L EA   +  +++ G+ 
Sbjct: 408 QGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLF 467

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD------- 416
           PD  +   +I G C  G++  A E    M EK +  +   +N ++DG+G+ GD       
Sbjct: 468 PDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEI 527

Query: 417 ----------------------------LSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
                                       LS AF + D M+S  +   V   N++I    R
Sbjct: 528 WADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCR 587

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR--GITPDI 506
            G+  D     ++M+ +G  PD  +YN LI       ++  A  L  +M  +  G+ PD+
Sbjct: 588 SGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDV 647

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            TY  ++ G C    MKEAE V  K+   G+  D   +  L   +       +A   H +
Sbjct: 648 FTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDE 707

Query: 567 WLLR 570
            L R
Sbjct: 708 MLQR 711



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 210/420 (50%), Gaps = 5/420 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            VI  LC  GK   A  +  +M++ G  PD  T+  L+ E CK GD  + +++  +M   
Sbjct: 300 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSR 359

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   +++ ++ + R   LDKAL  F+++   G+ P+ V + IL+   C+KG++ +A
Sbjct: 360 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEA 419

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E+L         DV+T   ++    K     +A  L+N+M ++ +  D     +L
Sbjct: 420 MNLRNEMLQQG---CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTIL 476

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C  G++ +A   F +M ++    DV+TYNTLL+   K G +D A   +  +    +
Sbjct: 477 IDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 536

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  IS+  ++  LC  G + +A      M+ KS+ P   I N +I GY R G+ S+   
Sbjct: 537 LPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEI 596

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM--LLDGIFPDVFTYNLLIGA 480
             + M+S G   +  ++N LI    +  ++  AF L K+M     G+ PDVFTYN ++  
Sbjct: 597 FLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHG 656

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    +  A  +  +M+ RG+ PD  TYT LI G  ++ N+ EA     ++   G + D
Sbjct: 657 FCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 205/398 (51%), Gaps = 5/398 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  L  D   + +++ + C  G       +   M  +  VPD++  + +++   + G+L
Sbjct: 322 LRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 381

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           +KA      + E    P+   Y   I GYCR   + +A++L + M   G   + VT+N +
Sbjct: 382 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTI 441

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +H LCK+ +LG+A K   E+    +     D  T TIL+D + K G+   A+ L+  M +
Sbjct: 442 LHGLCKRKMLGEADKLFNEM---TERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKE 498

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K I+ D+V YN L++GF   GDI +A   +  M+ +  LP  I+++ L+N LC +G L E
Sbjct: 499 KRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSE 558

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   +  +    + P  +   ++I+G C  G+      FL  M+ +  VP+   +N +I 
Sbjct: 559 AFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIY 618

Query: 410 GYGRCGDLSNAFSIRDLM--LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           G+ +  ++S AF +   M     G+  +VFT+N+++    R   + +A ++ ++M+  G+
Sbjct: 619 GFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGV 678

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
            PD  TY  LI    +  ++  A + +DEML+RG +PD
Sbjct: 679 NPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 212/442 (47%), Gaps = 20/442 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHVIREMSE 181
           A+I  L   G++  A     +MI++  V  V   N LV+     G  +   D +IR   +
Sbjct: 108 AMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQ 167

Query: 182 MRP----------------SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
            R                 + +    NA I    R+  ++ A  ++  ++ +G+  N  T
Sbjct: 168 ARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYT 227

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
            NI+V+ALCK G +     FL EV    +     D++T   L+ +Y   G   +A  L +
Sbjct: 228 LNIMVNALCKDGKMEKVGTFLSEV---QEKGVYPDIVTYNTLISAYSSQGLMEEAFELMH 284

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M  K     +  YN +ING C +G    A   F +ML+ G  PD  TY +LL   CK+G
Sbjct: 285 AMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 344

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
              E  + +  +    V PD + + +++      G++ KA  +  S+ E  ++P+  I+ 
Sbjct: 345 DAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 404

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
           ++I GY R G +S A ++R+ ML  G + +V T+N ++    +   + +A  L  EM   
Sbjct: 405 ILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 464

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G+FPD +T  +LI   C LG++  A++L+ +M  + I  D++TY  L+ G    G++  A
Sbjct: 465 GLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTA 524

Query: 526 EEVFAKIQTLGLAIDHIPFRIL 547
           +E++A + +  +    I F IL
Sbjct: 525 KEIWADMVSKEILPTPISFSIL 546



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/425 (23%), Positives = 190/425 (44%), Gaps = 43/425 (10%)

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           H++     +  + +C       +G  RV  ++    L ST +N G   N    ++L+   
Sbjct: 111 HILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNS---LVSTYSNCG--SNDSVFDLLIRTF 165

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            +   L +A +     L    G   S +     L+ S  + G    A  ++ ++ +  + 
Sbjct: 166 VQARKLREAYEAF--TLLRSKGYTVS-IDACNALIGSLVRIGWVELAWRIYQEISRSGVG 222

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL---------------- 337
            ++   N+++N  C +G +     +  ++ ++G  PD++TYNTL                
Sbjct: 223 VNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFEL 282

Query: 338 -------------------LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
                              +N LCK GK + A   +  + ++G++PD  +Y++++   C 
Sbjct: 283 MHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 342

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            GD V+       M  + VVP+   ++ ++  + R G+L  A    + +   G+  +   
Sbjct: 343 KGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 402

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +  LI    R G I +A +L+ EML  G   DV TYN ++   C    +  A +L++EM 
Sbjct: 403 YTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 462

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
            RG+ PD  T T LI GHC  GN++ A E+F K++   + +D + +  L   + ++ + D
Sbjct: 463 ERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDID 522

Query: 559 KARDI 563
            A++I
Sbjct: 523 TAKEI 527



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 126/271 (46%)

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            +++LI  F     +  A+  F  +  +G+   +   N L+  L + G ++ A   Y  +
Sbjct: 157 VFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEI 216

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
           S++GV  +  +   ++  LC  G + K   FL  + EK V P+   +N +I  Y   G +
Sbjct: 217 SRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLM 276

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             AF +   M S G S  V+T+N +I    + G    A  +  EML  G+ PD  TY  L
Sbjct: 277 EEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 336

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           +  +C  G       ++ +M  R + PD++ ++ ++      GN+ +A   F  ++  GL
Sbjct: 337 LMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 396

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             D++ + IL + Y R     +A ++  + L
Sbjct: 397 IPDNVIYTILIQGYCRKGMISEAMNLRNEML 427


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 221/476 (46%), Gaps = 67/476 (14%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+ +G  P++L +N ++N LCK G++  A+ +++++ E   SP+  TY + I G+CR +
Sbjct: 205 RMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 264

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKK----------------GLLGDAVKFL 246
           +LD AL +F+ MA  G  PN VT++ L++ LC                  G+L  A    
Sbjct: 265 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 324

Query: 247 GEVLADDDGKATSD----------------VITSTILM---------------------D 269
           G ++A  D     D                V T T L+                     D
Sbjct: 325 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 384

Query: 270 SYFKNGDKFQAL--------------ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
             F N   + AL               + N M +     +IV YN +I G+C+ GD   A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                 ML+RG   +++TYNT++   C  G    A     ++   G  PD+ SY  +I G
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C    +  A      M++  + P    +  +IDGY +   L  A S+ + M   G   N
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           V T+N LI   T+  +   A  L K M+ +GIFP+V TY  +I   C  G   LAL++++
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +M+ +G  P+++TY+ LI+     G ++EAE +FA+++  GL  D I +  + + Y
Sbjct: 625 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAY 680



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 202/422 (47%), Gaps = 3/422 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E +   +  +I  LC  G++  A  L R+MI  G +P   T    +  LC +G  E A  
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  +M      PN  TY A I+G C    L  A+ LF  M+ +G+ PN VT+N L++ L 
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 401

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           +   +  A   L   L   +G  + +++T   ++  Y   GD  +A+ + N+M Q+    
Sbjct: 402 ENRRIKYAFVVLN--LMGRNG-CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++V YN +I G+C +G+ +SA      M   G  PD  +Y  L+   CK  K++ A   +
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G+ P++++Y  +I G C    +  A   L  M      P    +NV+I G  + 
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
            + S A  +  +M+  G+  NV T+ A+I    + GS   A  +  +M+  G  P++ TY
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           + LI A    G +  A  L+ E+ R G+ PD ITY ++I+ +   G ++ A     ++  
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698

Query: 535 LG 536
            G
Sbjct: 699 AG 700



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 191/410 (46%), Gaps = 16/410 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+  C  G   +AL +   M   G  PD  ++  L+   CKI  +E A  +  EM +  
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY A I GYC+  +LD A  L   M  +G RPN  T+N+L+H L K+     A 
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L +V+ ++      +V+T T ++D   KNG    AL ++N M ++    +++ Y+ LI
Sbjct: 586 E-LCKVMIEEG--IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
                 G +  A   F ++ + G +PD ITY  ++      GK++ A +F G + K G  
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 702

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC-GDLSNAFS 422
           P   +Y  +I+GL          E+LL+  ++ +   P +      GY     D  +  S
Sbjct: 703 PTLWTYGVLIKGL--------KNEYLLA--DQRLAALPDVVPNCSFGYQTTDQDAVSVMS 752

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
            +   L  G+S  V   NAL+   +  G  F+A  L   M+  G+ PD   YN L+ +  
Sbjct: 753 AKLAELDPGLSVQV--QNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLL 810

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            + ++ LA+ ++  M  +G    +  Y ELI   C     KEA   F  +
Sbjct: 811 RVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENM 860



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 175/374 (46%), Gaps = 3/374 (0%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            Y+A +    R+      +  +  M + G++PN + +N +++ALCK G + DA   + +V
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
               + + + D  T T ++  + +  D   AL ++N M ++  + + V Y+ LING C +
Sbjct: 242 F---ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDS 298

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G ++ AF    +M+  G LP   T    +  LC  G  ++A   +  +   G  P+  +Y
Sbjct: 299 GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 358

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             +I GLC+ G +  A      M    V P    +N +I+       +  AF + +LM  
Sbjct: 359 TALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGR 418

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G S N+ T+N +I      G    A  +   ML  G   ++ TYN +I   C+ G+   
Sbjct: 419 NGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTS 478

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           AL++ D M   G  PD  +YTELI G C    M+ A  +F ++   GL  + + +  L  
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538

Query: 550 RYRRMKESDKARDI 563
            Y + ++ D A  +
Sbjct: 539 GYCKDEKLDTATSL 552



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 135/308 (43%), Gaps = 35/308 (11%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           + ++  + + Q  ++  + AY+ L+      G  ++    + +ML  G  P+++ YN ++
Sbjct: 163 RTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVI 222

Query: 339 NCLCKQGK-----------------------------------LDEASHFYGVLSKTGVA 363
           N LCK G                                    LD A   +  ++K G  
Sbjct: 223 NALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCE 282

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y T+I GLC  G + +A + +  M+   ++P  H     I      G   +A+ +
Sbjct: 283 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 342

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M + G   NV+T+ ALI      G +  A  L   M  DG+FP+  TYN LI     
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVE 402

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              I  A  + + M R G +P+I+TY E+IKG+C  G+ K+A  V   +   G + + + 
Sbjct: 403 NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462

Query: 544 FRILKKRY 551
           +  + K Y
Sbjct: 463 YNTIIKGY 470



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 137/318 (43%), Gaps = 20/318 (6%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  LC  G    AL +  KMI++G +P++LT++ L+  L + G +E+A+++  E+ 
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  TY   I  Y    +++ A +    M   G +P   T+ +L+     KGL  
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI-----KGLKN 717

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +       +LAD    A  DV+ +       ++  D+     +   + + +    +   N
Sbjct: 718 EY------LLADQRLAALPDVVPNCSF---GYQTTDQDAVSVMSAKLAELDPGLSVQVQN 768

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L++     G    A      M+ +G  PD   YN+LL  L +   +D A   +  +S  
Sbjct: 769 ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 828

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR------C 414
           G       YK +I  LC      +AR    +ML ++  P+  +  V+IDG  R      C
Sbjct: 829 GCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLC 888

Query: 415 GDLSNAFSIRDLMLSFGV 432
            +  +    R  M SF +
Sbjct: 889 MEFLHIMETRRYMPSFHI 906



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 66/131 (50%)

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           ++   S  D++   G+   +F ++AL++  +R G           ML +G+ P++  YN 
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +I A C  G++  A  +  ++    ++PD  TYT +I GHC + ++  A +VF ++   G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280

Query: 537 LAIDHIPFRIL 547
              + + +  L
Sbjct: 281 CEPNTVTYSTL 291


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 201/393 (51%), Gaps = 3/393 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+ LC  G    AL L +KM +KG  PDV+ +N +++ LCK     +A +   EM 
Sbjct: 179 YTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMV 238

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  TY++ + G+C + +L++A  LF  M    + PN VT  ILV  LCK+G++ 
Sbjct: 239 DQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMIL 298

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +   E++ ++      D  T + LMD Y       +A  L++ M  K     +  YN
Sbjct: 299 EARRVF-EMMTENG--VEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYN 355

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LING C +  ++ A     +M  R   PD +TY+TL+   C+ G+   A   +  +   
Sbjct: 356 ILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSY 415

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ PD I+Y  ++ GLC HG + +A   L +M E  + P   I+N++I G    G L  A
Sbjct: 416 GLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAA 475

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +   +   G+  +V T+  +I    + G   +A  + ++M+++G  P+  TYN+ I  
Sbjct: 476 RELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQG 535

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
               G    A++L +EM+ RG + D  T+  L+
Sbjct: 536 FLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 206/425 (48%), Gaps = 3/425 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC   KI  A+ L  ++ + G  P ++T+  ++  LCKIG    A  ++++M E 
Sbjct: 146 TLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEK 205

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   YN  I   C+    ++A++ FS M + GI PN VT++ ++H  C  G L +A
Sbjct: 206 GCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEA 265

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                +++  +      + +T TIL+D   K G   +A  ++  M +  ++ D   Y+ L
Sbjct: 266 TSLFKQMIGRN---VMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSAL 322

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+CL   +  A   F  M+ +GF P V  YN L+N  CK  +L+EA      +    +
Sbjct: 323 MDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDL 382

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y T++QG C  G    A++    M    ++P+   +++++DG  + G L  AF 
Sbjct: 383 TPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFR 442

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M    +  ++  +N LI      G +  A  L   + + GI P V TY ++I    
Sbjct: 443 LLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLL 502

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G  + A +++ +M+  G  P+  TY   I+G    G+   A  +  ++   G + D  
Sbjct: 503 KEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSS 562

Query: 543 PFRIL 547
            F++L
Sbjct: 563 TFQML 567



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 206/428 (48%), Gaps = 3/428 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM + G  P  +T   L+N LC    +  A  +  E+ +M  +P+  TY   I G C++ 
Sbjct: 131 KMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIG 190

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
               AL L   M   G +P+ V +N ++ +LCK     +A+ F  E++   D     +V+
Sbjct: 191 HTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMV---DQGIPPNVV 247

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T + ++  +   G   +A +L+  M  +N+  + V + +L++G C  G I  A   F  M
Sbjct: 248 TYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMM 307

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            + G  PD  TY+ L++  C Q ++DEA   + ++   G AP    Y  +I G C    +
Sbjct: 308 TENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRL 367

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A+  L  M ++ + P+   ++ ++ G+ + G    A  +   M S+G+  +  T++ L
Sbjct: 368 NEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSIL 427

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +    + G + +AF L K M    I P +  YN+LI   CN G +  A +L+  +  +GI
Sbjct: 428 LDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGI 487

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            P ++TYT +I G    G   EA E+F K+   G   +   + +  + + R  +   A  
Sbjct: 488 QPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVR 547

Query: 563 IHQKWLLR 570
           + ++ + R
Sbjct: 548 LIEEMVGR 555



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 222/440 (50%), Gaps = 13/440 (2%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV------IREMSEMRPSPNCA 189
           T + L ++M      P+V T   L+N LC        DHV      + +M ++   P   
Sbjct: 87  TVISLCKQMDLSNIRPNVYTLTILINCLCH----SNRDHVHFAFSALGKMFKLGLQPTHV 142

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           T+   + G C   ++  A+ LF  +   G  P+ +T+  ++  LCK G   +A++ L ++
Sbjct: 143 TFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKM 202

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
              ++     DV+    ++DS  K+    +A+  +++M  + I  ++V Y+ +++GFC  
Sbjct: 203 ---EEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNL 259

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G ++ A + F QM+ R  +P+ +T+  L++ LCK+G + EA   + ++++ GV PD  +Y
Sbjct: 260 GQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTY 319

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             ++ G C+   + +A++    M+ K   P   ++N++I+G+ +   L+ A ++   M  
Sbjct: 320 SALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYD 379

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
             ++ +  T++ L+    + G    A  L KEM   G+ PD  TY++L+   C  GH+  
Sbjct: 380 RDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDE 439

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A +L   M    I P I  Y  LI+G C  G ++ A E+F+ +   G+    + + ++  
Sbjct: 440 AFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMIS 499

Query: 550 RYRRMKESDKARDIHQKWLL 569
              +   S++A ++ +K ++
Sbjct: 500 GLLKEGLSNEACEMFRKMVV 519



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 203/423 (47%), Gaps = 5/423 (1%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN--ELDKA 207
           +P V+  N L+  L K         + ++M      PN  T    I   C  N   +  A
Sbjct: 66  LPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFA 125

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
                 M   G++P  VT   L++ LC K  + DAVK   E+     G A S +IT T +
Sbjct: 126 FSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEI--GKMGFAPS-LITYTTI 182

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +    K G    AL L   M +K  + D+VAYN +I+  C +   + A  +F +M+ +G 
Sbjct: 183 IKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGI 242

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+V+TY+++L+  C  G+L+EA+  +  +    V P+ +++  ++ GLC  G I++AR 
Sbjct: 243 PPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARR 302

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M E  V P+ + ++ ++DGY     +  A  + D+M+  G + +V  +N LI    
Sbjct: 303 VFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHC 362

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +   + +A +L  EM    + PD  TY+ L+   C  G   +A +L+ EM   G+ PD I
Sbjct: 363 KSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSI 422

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           TY+ L+ G C  G++ EA  +   +Q   +      + IL +      + + AR++    
Sbjct: 423 TYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNL 482

Query: 568 LLR 570
            ++
Sbjct: 483 FVK 485



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 115/288 (39%), Gaps = 49/288 (17%)

Query: 294 TDIVAYNVLINGFCLNGD----ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           T+I   ++   GFC N +    ++ A A F Q+L    LP V+ +N LL      G L +
Sbjct: 28  TNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLL------GSLVK 81

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
             H+  V+S                 LC   D+   R            P  +   ++I+
Sbjct: 82  KKHYSTVIS-----------------LCKQMDLSNIR------------PNVYTLTILIN 112

Query: 410 GYGRCGDLSN------AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
               C   SN      AFS    M   G+     TF  L+        I DA  L  E+ 
Sbjct: 113 ----CLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIG 168

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             G  P + TY  +I   C +GH   ALQL  +M  +G  PD++ Y  +I   C      
Sbjct: 169 KMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRAN 228

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           EA   F+++   G+  + + +  +   +  + + ++A  + ++ + RN
Sbjct: 229 EAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRN 276


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 216/475 (45%), Gaps = 67/475 (14%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L ++M+  G  P +LT N L+N L K G + +A+ ++ ++ +   SP+  TY + I G+C
Sbjct: 227 LYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHC 286

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT- 258
           R   LD A  +F  M   G  PN VT++ L++ LC +G + +A+  L E++         
Sbjct: 287 RNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVY 346

Query: 259 -------------------------------SDVITSTILMDSYFKNGDKFQALALWNDM 287
                                           +V T T L+    + G    A+ L++ M
Sbjct: 347 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 406

Query: 288 FQKNIQTDIVAYNVLIN-----------------------------------GFCLNGDI 312
            ++ +  + V YN LIN                                   G CL GDI
Sbjct: 407 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 466

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A   F +MLK G LP V+TYNTL+N    +G ++ A+    ++ + G  PD+ +Y  +
Sbjct: 467 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNEL 526

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           + G    G +  A  +   M+E  + P P  +  +IDG+ + G +  A S+ + M   G 
Sbjct: 527 VSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGC 586

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           + NV ++NA+I   ++     +A  +  +M   G+ P+V TY  LI   C  G    A +
Sbjct: 587 NPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFK 646

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++ +M +R   P++ TY+ LI G C  G   EAE +  +++  GLA D + F  L
Sbjct: 647 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 701



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 210/433 (48%), Gaps = 3/433 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  G++  AL +  +MI+KG  P V T+   +  LC I   E+A  ++  M 
Sbjct: 313 YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMK 372

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  TY A I+G  R+ +L+ A+ L+  M   G+ PN VT+N L++ LC  G   
Sbjct: 373 KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFS 432

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A+K    +   +   + ++  T   ++      GD  +A+ L+  M +      +V YN
Sbjct: 433 TALKIFHWM---EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 489

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LING+   G++++A      M + G  PD  TYN L++   K GKL+ AS ++  + + 
Sbjct: 490 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 549

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+ +SY T+I G    G +  A   L  M E    P    +N +I+G  +    S A
Sbjct: 550 GLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEA 609

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             I D M   G+  NV T+  LI    R G    AF +  +M      P+++TY+ LI  
Sbjct: 610 EKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 669

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  G    A  L  EM R+G+ PD +T+T LI G    G +  A  +  ++  +G   +
Sbjct: 670 LCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPN 729

Query: 541 HIPFRILKKRYRR 553
           +  + +L K  ++
Sbjct: 730 YRTYSVLLKGLQK 742



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 218/484 (45%), Gaps = 62/484 (12%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I +LC+GG+  TAL +   M   G++ +  T+N ++  LC  GD+EKA  +  +M +M
Sbjct: 420 ALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM 479

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
            P P   TYN  I GY     ++ A  L   M  NG  P+  T+N LV    K G L  A
Sbjct: 480 GPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESA 539

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW------------------ 284
             +  E++   +     + ++ T L+D + K+G    AL+L                   
Sbjct: 540 SFYFQEMV---ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAV 596

Query: 285 -----------------NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
                            + M ++ +  +++ Y  LI+G C NG    AF  F  M KR  
Sbjct: 597 INGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 656

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           LP++ TY++L+  LC++GK DEA      + + G+APD++++ ++I G  + G I  A  
Sbjct: 657 LPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFL 716

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGR-CGDLSN----------AFSIRDLMLSFGVSSNV 436
            L  M++    P    ++V++ G  + C  L            +FS  +  ++F + SN+
Sbjct: 717 LLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNL 776

Query: 437 F-------------TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
                         T++ L+    R G  ++A  L K+M   G  PD   Y  L+ A C 
Sbjct: 777 LARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCK 836

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              +  AL+++  +  +G    +  Y  LI   C  G ++EA+ +F  +       D I 
Sbjct: 837 NLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIV 896

Query: 544 FRIL 547
           + +L
Sbjct: 897 WTVL 900



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 177/380 (46%), Gaps = 3/380 (0%)

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           ++ +    + E+S M    +  + N  +    +   ++ A +L+  M N+GI+P+ +T N
Sbjct: 185 EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFN 244

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            L++ L KKG + +A   L ++   D    + DV T T L+  + +N +   A  +++ M
Sbjct: 245 TLINILSKKGKVREAELILSQIFQYD---LSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 301

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            ++    + V Y+ LING C  G +  A     +M+++G  P V TY   +  LC     
Sbjct: 302 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 361

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           +EA      + K G  P+  +Y  +I GL   G +  A      ML++ +VP    +N +
Sbjct: 362 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 421

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I+     G  S A  I   M   G  +N  T+N +I     GG I  A  L ++ML  G 
Sbjct: 422 INELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 481

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            P V TYN LI      G+++ A +L D M   G  PD  TY EL+ G    G ++ A  
Sbjct: 482 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 541

Query: 528 VFAKIQTLGLAIDHIPFRIL 547
            F ++   GL  + + +  L
Sbjct: 542 YFQEMVECGLNPNPVSYTTL 561



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 195/428 (45%), Gaps = 27/428 (6%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+ +A +  ++M++ G  P+ +++  L++   K G ++ A  ++  M EM  +PN  +Y
Sbjct: 534 GKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESY 593

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           NA I G  + N   +A  +   MA  G+ PN +T+  L+  LC+ G    A K   ++  
Sbjct: 594 NAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM-- 651

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            +  K   ++ T + L+    + G   +A  L  +M +K +  D V +  LI+GF + G 
Sbjct: 652 -EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGR 710

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE---------------------- 349
           I  AF    +M+  G  P+  TY+ LL  L K+  L E                      
Sbjct: 711 IDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNF 770

Query: 350 --ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
              S+    +S+ G  P   +Y T++ GLC  G   +A + +  M E+   P+  I+  +
Sbjct: 771 EIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSL 830

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           +  + +  ++ +A  I   + + G   ++  + ALI A  + G + +A +L   ML    
Sbjct: 831 LIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEW 890

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
             D   + +L+      G + L ++L   M  +  TP+I TY  L +     G   E+E 
Sbjct: 891 NADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEP 950

Query: 528 VFAKIQTL 535
           +  K++ L
Sbjct: 951 LADKLKVL 958



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 99/412 (24%), Positives = 164/412 (39%), Gaps = 62/412 (15%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V C L  +   +  +I      GK+  AL L  +M + G  P+V ++N ++N L K    
Sbjct: 547 VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRF 606

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A+ +  +M+E    PN  TY   I G CR      A  +F  M      PN  T++ L
Sbjct: 607 SEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 666

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF- 288
           ++ LC++G   +A   L E+  +  G A  D +T T L+D +   G    A  L   M  
Sbjct: 667 IYGLCQEGKADEAEILLKEM--ERKGLA-PDEVTFTSLIDGFVVLGRIDHAFLLLRRMVD 723

Query: 289 -----------------------------------------QKNIQTDIVA--------- 298
                                                    +K++  +IV+         
Sbjct: 724 VGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEI 783

Query: 299 --------YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
                   Y+ L++G C  G    A      M +RGF PD   Y +LL   CK  ++D A
Sbjct: 784 GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHA 843

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +  +   G       Y+ +I  LC  G + +A+    +MLEK    +  +W V++DG
Sbjct: 844 LKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDG 903

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
             + G+L     +  +M S   + N+ T+  L    +R G   ++  L  ++
Sbjct: 904 LLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 136/307 (44%), Gaps = 36/307 (11%)

Query: 266 ILMDSYFKNGDKFQALA-LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           ILM    +N ++ + +A   N++        + + N L+        +  A   + QML 
Sbjct: 174 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 233

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHF------------------------------- 353
            G  P ++T+NTL+N L K+GK+ EA                                  
Sbjct: 234 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 293

Query: 354 -YGV---LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
            +GV   + K G  P+ ++Y T+I GLC  G + +A + L  M+EK + P  + + + I 
Sbjct: 294 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 353

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
                     A  +   M   G   NV T+ ALI   +R G +  A  L  +ML +G+ P
Sbjct: 354 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 413

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +  TYN LI   C  G    AL+++  M   G   +  TY E+IKG C  G++++A  +F
Sbjct: 414 NTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF 473

Query: 530 AKIQTLG 536
            K+  +G
Sbjct: 474 EKMLKMG 480



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 105/225 (46%)

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
           + ++   + F   +S  G      S  T++  L     +  AR     ML   + P    
Sbjct: 183 EEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLT 242

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N +I+   + G +  A  I   +  + +S +VFT+ +LIL   R  ++  AF +   M+
Sbjct: 243 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV 302

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
            +G  P+  TY+ LI   CN G +  AL + +EM+ +GI P + TYT  I   CA  + +
Sbjct: 303 KEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 362

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           EA E+ A+++  G   +   +  L     R+ + + A  ++ K L
Sbjct: 363 EAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 407


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 221/445 (49%), Gaps = 3/445 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   ++  A+   R+   +   P V++ N L++  CK+G ++ A      M +  
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYG 300

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  +YN  + G C    +++AL   + M N+G+ P+ VT+NIL +     GL+  A 
Sbjct: 301 LLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAW 360

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K +  +L +       D++T TIL+  + + G+  ++  L   M  + ++  IV Y VL+
Sbjct: 361 KVVQRMLLNG---LNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLL 417

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C +G I  A     +M   G  PD++TY+ L++ LCK+G ++EA   Y  +    + 
Sbjct: 418 SSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIY 477

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+      II GL   G I +A+ +  S+ +  V  E  ++N++IDGY + G++  A   
Sbjct: 478 PNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRS 537

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              ++  G+S  + TFN+LI    + G + +A  L   + + G+ P   TY  L+   C 
Sbjct: 538 YKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCE 597

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +H    +  EM  + I P  ITYT ++KG C  G + E+ ++   +   GL  D I 
Sbjct: 598 EGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQIT 657

Query: 544 FRILKKRYRRMKESDKARDIHQKWL 568
           +  + + + +  +  KA  +H + L
Sbjct: 658 YNTVIQSFCKAHDLQKAFQLHNQML 682



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 221/442 (50%), Gaps = 3/442 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++  L  D   +  ++  LC+ G +  AL     M   G  PD++T+N L N    +G +
Sbjct: 297 IKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLI 356

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A  V++ M     +P+  TY   I G+C++  ++++  L   M + G++ + VT+ +L
Sbjct: 357 SGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVL 416

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           + +LCK G + +AV  L E+   +      D++T ++L+    K G   +A+ L+ +M  
Sbjct: 417 LSSLCKSGRIDEAVILLHEM---EVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCS 473

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K I  +    + +I+G    G IS A  YF  + K     ++I YN +++   K G + E
Sbjct: 474 KRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGE 533

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   Y  + + G++P  +++ ++I G C  G + +A + L ++    +VP    +  +++
Sbjct: 534 AVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMN 593

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           GY   GD+ + F +   M +  +     T+  ++    + G + ++  L K M   G+FP
Sbjct: 594 GYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFP 653

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D  TYN +I + C    +  A QL+++ML+  + P  +TY  LI G C  GN+K+A+ + 
Sbjct: 654 DQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLL 713

Query: 530 AKIQTLGLAIDHIPFRILKKRY 551
             +Q   + +  + +  + K +
Sbjct: 714 VTLQDQSIRLTKVAYTTIIKAH 735



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 213/409 (52%), Gaps = 3/409 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I  A  + ++M+  G  PD++T+  L+   C++G++E++  +  +M       +  TY
Sbjct: 354 GLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTY 413

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              ++  C+   +D+A+ L   M   G++P+ +T+++L+H LCK+G + +A++   E+ +
Sbjct: 414 TVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCS 473

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
               +   +    + ++   F+ G   +A   ++ + + ++  +I+ YN++I+G+   G+
Sbjct: 474 K---RIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGN 530

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I  A   + Q++++G  P ++T+N+L+   CK+GKL EA      +   G+ P  ++Y T
Sbjct: 531 IGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTT 590

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++ G C  GD+    + L  M  K++ P    + V++ G  + G L  +  +   M + G
Sbjct: 591 LMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARG 650

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  +  T+N +I +  +   +  AF L  +ML   + P   TYN+LI   C  G++  A 
Sbjct: 651 LFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDAD 710

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           +L   +  + I    + YT +IK HCA+G+++ A   F ++   G  + 
Sbjct: 711 RLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVS 759



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 211/450 (46%), Gaps = 3/450 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I   C  G I  +  L+ KM+ +G    ++T+  L++ LCK G +++A 
Sbjct: 371 LNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAV 430

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM  +   P+  TY+  I G C+   +++A+ L+  M +  I PN    + ++  L
Sbjct: 431 ILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGL 490

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            +KG + +A  +   V   D      ++I   I++D Y K G+  +A+  +  + +K I 
Sbjct: 491 FEKGAISEAQMYFDSVTKSD---VAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGIS 547

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             IV +N LI GFC  G ++ A      +   G +P  +TY TL+N  C++G +      
Sbjct: 548 PTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDM 607

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +    + P QI+Y  +++GLC  G + ++ + L  M  + + P+   +N +I  + +
Sbjct: 608 LHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCK 667

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             DL  AF + + ML   +  +  T+N LI      G++ DA  L   +    I      
Sbjct: 668 AHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVA 727

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  +I A C  G +  AL  + +M+ RG    I  Y+ +I   C R  + +A+  F  + 
Sbjct: 728 YTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMML 787

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           T G+  D     ++   + R  + +   +I
Sbjct: 788 THGIPPDQDICLVMLNAFHRSGDPNSVFEI 817



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 189/386 (48%), Gaps = 41/386 (10%)

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+ +M  +    + ATYN+ +     +   D    +++ +  +G+  N  T+ IL+  LC
Sbjct: 190 VLAKMKVLNLQVSIATYNSLLYN---LRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLC 246

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           ++  L DAV FL E   ++ G +                                     
Sbjct: 247 RQSRLQDAVTFLRETGGEEFGPS------------------------------------- 269

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
            +V++N L++GFC  G +  A ++FC M+K G LPDV +YN LL+ LC  G ++EA  F 
Sbjct: 270 -VVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFT 328

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   GV PD ++Y  +  G  I G I  A + +  ML   + P+   + ++I G+ + 
Sbjct: 329 NDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQM 388

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G++  +F +++ MLS G+  ++ T+  L+ +  + G I +A  L  EM + G+ PD+ TY
Sbjct: 389 GNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTY 448

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           ++LI   C  G +  A++LY+EM  + I P+    + +I G   +G + EA+  F  +  
Sbjct: 449 SVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTK 508

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKA 560
             +A + I + I+   Y ++    +A
Sbjct: 509 SDVAEEIILYNIMIDGYAKLGNIGEA 534



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 190/419 (45%), Gaps = 38/419 (9%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++  LC  G+I  A+ L  +M   G  PD+LT++ L++ LCK G +E+A  +  EM 
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMC 472

Query: 181 EMRPSPN---CAT--------------------------------YNAFITGYCRVNELD 205
             R  PN   C+                                 YN  I GY ++  + 
Sbjct: 473 SKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIG 532

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +A+  +  +   GI P  VT N L++  CKKG L +AVK L  +     G   + V T T
Sbjct: 533 EAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVH--GLVPTSV-TYT 589

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            LM+ Y + GD      + ++M  K I+   + Y V++ G C  G +  +      M  R
Sbjct: 590 TLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYAR 649

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  PD ITYNT++   CK   L +A   +  + +  + P  ++Y  +I GLC++G++  A
Sbjct: 650 GLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDA 709

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
              L+++ ++S+      +  II  +   GD+ NA      M+  G   ++  ++A+I  
Sbjct: 710 DRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINR 769

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
             +   I DA      ML  GI PD     +++ A    G  +   +++  M++ G+ P
Sbjct: 770 LCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 167/362 (46%), Gaps = 24/362 (6%)

Query: 200 RVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           RV+  D AL LF  + N  G R +RV+  I+ H + +KG   +  + L + + +++G  +
Sbjct: 91  RVDNSDSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQ-MVEEEGSGS 149

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           +  +    L+ + F++ D                  + V +++L   +     +  A   
Sbjct: 150 APSLCE--LLCNSFRDWD-----------------LNNVVWDMLACAYSRAEMVHDALFV 190

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             +M        + TYN+LL  L      D     Y  +  +GV  ++ +   +I GLC 
Sbjct: 191 LAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCR 247

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
              +  A  FL     +   P    +N ++ G+ + G +  A S   +M+ +G+  +V++
Sbjct: 248 QSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYS 307

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N L+      GS+ +A     +M   G+ PD+ TYN+L      LG I  A ++   ML
Sbjct: 308 YNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRML 367

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             G+ PD++TYT LI GHC  GN++E+ ++  K+ + GL +  + + +L     +    D
Sbjct: 368 LNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRID 427

Query: 559 KA 560
           +A
Sbjct: 428 EA 429



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 68/139 (48%)

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV  N +T   LI    R   + DA +  +E   +   P V ++N L+   C +G + +A
Sbjct: 230 GVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVA 289

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
              +  M++ G+ PD+ +Y  L+ G C  G+M+EA E    ++  G+  D + + IL   
Sbjct: 290 KSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANG 349

Query: 551 YRRMKESDKARDIHQKWLL 569
           +R +     A  + Q+ LL
Sbjct: 350 FRILGLISGAWKVVQRMLL 368


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 209/412 (50%), Gaps = 19/412 (4%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  VI      G +G A  L  KM+  G  P+V+T N +++ LCK+  ++KA+ V+++M 
Sbjct: 255 YTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMI 314

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PNC TYN+ I GY    +  +A+ +   M+ +G RPN VT+++L+  LCK GL  
Sbjct: 315 DEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHA 374

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +    ++        S   T   L+  Y   G+      + + M Q  ++     +N
Sbjct: 375 EAREIFNSMIQSGQKPNAS---TYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFN 431

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           + I  +C  G +  A   F +M ++GF+PD++ Y T+++ LCK G+LD+A   +  +   
Sbjct: 432 IEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDD 491

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G++PD I++ T+I G  +HG   KA E    M+++ + P  + +N +ID   + G ++ A
Sbjct: 492 GLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEA 551

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + DLM   G   NV ++N +I      G + +   L  +MLL G+ P   T+N L+  
Sbjct: 552 RKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLL-- 609

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
                         D M+  G+ PD++T   LI   C  G +++   +F ++
Sbjct: 610 --------------DGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREM 647



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 200/426 (46%), Gaps = 6/426 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHVIREMSEMRPSPN 187
           C  G +        ++I+ G     +T   L+  LC       A + V+R M E+  +P+
Sbjct: 155 CDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPD 214

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNG--IRPNRVTHNILVHALCKKGLLGDAVKF 245
             +Y   + G C   + ++A  L   MA +G    PN V++  ++H   K+G +G A   
Sbjct: 215 VFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTL 274

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             ++L   D     +V+T   ++D   K     +A A+   M  ++I  +   YN LI+G
Sbjct: 275 FCKML---DHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHG 331

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           +  +G  + A     +M + G  P+V+TY+ L++CLCK G   EA   +  + ++G  P+
Sbjct: 332 YLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPN 391

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
             +Y +++ G    G++V        M++  + P  H++N+ I  Y +CG L  A    +
Sbjct: 392 ASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFN 451

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   G   ++  +  +I    + G + DA S   +M+ DG+ PD+ T+N LI      G
Sbjct: 452 KMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHG 511

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
               A +L+ EM+ RGI P++ T+  +I      G + EA ++F  +   G   + + + 
Sbjct: 512 KWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYN 571

Query: 546 ILKKRY 551
            +   Y
Sbjct: 572 TMIHGY 577



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 207/427 (48%), Gaps = 6/427 (1%)

Query: 124 VIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++R LC   +   A+  + R+M + G  PDV ++  L+  LC     E+A  +I  M+E 
Sbjct: 185 LLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAED 244

Query: 183 RPS--PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
             +  PN  +Y   I G+ +  ++ KA  LF  M ++GI PN VT N ++  LCK   + 
Sbjct: 245 GDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMD 304

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A   L +++   D     +  T   L+  Y  +G   +A+ +  +M +   + ++V Y+
Sbjct: 305 KAEAVLQQMI---DEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYS 361

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI+  C +G  + A   F  M++ G  P+  TY +LL+    +G L + ++   ++ + 
Sbjct: 362 MLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQN 421

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P +  +   I   C  G + +A      M ++  +P+   +  +IDG  + G L +A
Sbjct: 422 GMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDA 481

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
            S    M+  G+S ++ TFN LI      G    A  L  EM+  GI P+V T+N +I  
Sbjct: 482 MSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDK 541

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
               G +  A +L+D M R G  P++++Y  +I G+   G + E  ++   +  +GL   
Sbjct: 542 LFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPT 601

Query: 541 HIPFRIL 547
            + F  L
Sbjct: 602 AVTFNTL 608



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 183/392 (46%), Gaps = 2/392 (0%)

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           K   PD+ T   L++  C  G L      + ++ +        T+   +   C       
Sbjct: 138 KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSD 197

Query: 207 ALHL-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           A+++    M   G  P+  ++  L+  LC +    +A + +  ++A+D      +V++ T
Sbjct: 198 AMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELI-HMMAEDGDNCPPNVVSYT 256

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            ++  +FK GD  +A  L+  M    I  ++V  N +I+G C    +  A A   QM+  
Sbjct: 257 TVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE 316

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
             +P+  TYN+L++     G+  EA      +S+ G  P+ ++Y  +I  LC  G   +A
Sbjct: 317 HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEA 376

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           RE   SM++    P    +  ++ GY   G+L +  +++DLM+  G+      FN  I A
Sbjct: 377 REIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYA 436

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G + +A     +M   G  PD+  Y  +I   C +G +  A+  + +M+  G++PD
Sbjct: 437 YCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPD 496

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           IIT+  LI G    G  ++AEE+F ++   G+
Sbjct: 497 IITFNTLIHGFALHGKWEKAEELFYEMMDRGI 528



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 180/388 (46%), Gaps = 4/388 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           +P+ AT+   I+  C    L+        +   G+R   VT   L+  LC +    DA+ 
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMN 200

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK--NIQTDIVAYNVL 302
            +   + +     T DV + T L+          +A  L + M +   N   ++V+Y  +
Sbjct: 201 IVLRRMPELG--CTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTV 258

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GF   GD+  A+  FC+ML  G  P+V+T N++++ LCK   +D+A      +    +
Sbjct: 259 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 318

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+  +Y ++I G    G   +A   L  M      P    ++++ID   + G  + A  
Sbjct: 319 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEARE 378

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I + M+  G   N  T+ +L+      G++ D  ++K  M+ +G+ P    +N+ I A C
Sbjct: 379 IFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYC 438

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +  A   +++M ++G  PDI+ YT +I G C  G + +A   F ++   GL+ D I
Sbjct: 439 KCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDII 498

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLR 570
            F  L   +    + +KA ++  + + R
Sbjct: 499 TFNTLIHGFALHGKWEKAEELFYEMMDR 526



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 21/261 (8%)

Query: 120 RHV--AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR 177
           RHV    I   C  G++  A     KM Q+G +PD++ +  +++ LCKIG L+ A     
Sbjct: 427 RHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFC 486

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           +M +   SP+  T+N  I G+    + +KA  LF  M + GI PN  T N ++  L K+G
Sbjct: 487 QMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEG 546

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            + +A K    +       A  +V++   ++  YF  G+  + + L +DM    ++   V
Sbjct: 547 KVTEARKLFDLM---PRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAV 603

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            +N L++G                M+  G  PDV+T  TL++  C+ G++++    +  +
Sbjct: 604 TFNTLLDG----------------MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREM 647

Query: 358 SKTGVAPDQISYKTIIQGLCI 378
                  D I+    ++G+ +
Sbjct: 648 LGKADKTDTITENIKLRGVTV 668



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 16/205 (7%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI  LC  G++  A+    +MI  G  PD++T N L++     G  EKA+ + 
Sbjct: 461 DIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELF 520

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM +    PN  T+N+ I    +  ++ +A  LF  M   G +PN V++N ++H     
Sbjct: 521 YEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIA 580

Query: 237 GLLGDAVKFLGEVLADD------------DGKAT----SDVITSTILMDSYFKNGDKFQA 280
           G +G+ +K L ++L               DG  +     DV+T   L+DS  ++G     
Sbjct: 581 GEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDI 640

Query: 281 LALWNDMFQKNIQTDIVAYNVLING 305
           L L+ +M  K  +TD +  N+ + G
Sbjct: 641 LTLFREMLGKADKTDTITENIKLRG 665


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 208/419 (49%), Gaps = 2/419 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  AL    KM   G  PD +T+N L+N  C+ G L +A  ++  M +    P  
Sbjct: 220 CSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTR 279

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
           ATYN  ++ Y R+  + +A  +   M   G  P+  T+N+L   LC+ G + +A K   E
Sbjct: 280 ATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDE 339

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +  +  G  + DV+T   L+D+ FK      AL L  +M +K +++ +V +N+++ G C 
Sbjct: 340 M--EQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCR 397

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G +  A      M + G  PDVITYNTL++  CK G + +A      + ++G+  D  +
Sbjct: 398 EGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFT 457

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
             T++  LC      +A E L +  ++  VP+   +  ++  Y +      A  + D M+
Sbjct: 458 LNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMI 517

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
              ++ ++ T+N LI   +  G + +A     E++  G+ PD  TYN++I A C  G + 
Sbjct: 518 KRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLE 577

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            A Q +++M+     PD++T   L+ G C  G +++A ++F      G  +D I +  L
Sbjct: 578 KAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTL 636



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 216/479 (45%), Gaps = 44/479 (9%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L + L  L  M+  G     L  D   +  ++   C  G +G A  L  +M ++G VP  
Sbjct: 225 LADALSTLSKMQGFG-----LSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTR 279

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA------ 207
            T+N LV+   ++G +++A  V+  M+     P+  TYN    G C+  ++D+A      
Sbjct: 280 ATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDE 339

Query: 208 ------------------------------LHLFSTMANNGIRPNRVTHNILVHALCKKG 237
                                         L+L   M   G++ + VTHNI+V  LC++G
Sbjct: 340 MEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREG 399

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            L +A   LG +    +   T DVIT   L+D+  K G+  +A  L ++M +  ++ D  
Sbjct: 400 QLEEA---LGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTF 456

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
             N L+   C       A        +RGF+PD ++Y T++    K+ K + A   +  +
Sbjct: 457 TLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEM 516

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
            K  + P   +Y T+I+GL   G + +A + L  ++E  +VP+   +N+II  Y + GDL
Sbjct: 517 IKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDL 576

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             AF   + M+      +V T N L+      G +  A  L +  +  G   DV TYN L
Sbjct: 577 EKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTL 636

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           I A C    +  AL+ + +M  RG+ PD+ TY  L+      G   EA+++  K+   G
Sbjct: 637 IQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG 695



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 166/390 (42%), Gaps = 43/390 (11%)

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRV--NELDKALHLFSTMANNGIRPNRVTHNILVH 231
           H  R    +RPS   A  NA ++   R        +L  F ++    + PN  T N+LVH
Sbjct: 160 HSFRRRGCVRPSLQAA--NAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVH 217

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
             C KG L DA+  L                              K Q   L        
Sbjct: 218 THCSKGTLADALSTLS-----------------------------KMQGFGL-------- 240

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
              D V YN L+N  C  G +  A     +M K G +P   TYNTL++   + G + +A+
Sbjct: 241 -SPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQAT 299

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV-PEPHIWNVIIDG 410
                ++  G  PD  +Y  +  GLC  G + +A +    M +  +V P+   +N ++D 
Sbjct: 300 DVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDA 359

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             +C   S+A ++ + M   GV S++ T N ++    R G + +A    + M  +G+ PD
Sbjct: 360 CFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPD 419

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V TYN LI ASC  G++  A  L DEM+R G+  D  T   L+   C     +EAEE+  
Sbjct: 420 VITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLR 479

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
                G   D + +  +   Y +  + + A
Sbjct: 480 APPQRGFVPDEVSYGTVMAAYFKEYKPEPA 509



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 173/413 (41%), Gaps = 74/413 (17%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL L  +M +KG    ++THN +V  LC+ G LE+A   +  M+E   +P+  TYN  I 
Sbjct: 369 ALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLID 428

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
             C+   + KA  L   M  +G++ +  T N L++ LCK+    +A + L    A     
Sbjct: 429 ASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLR---APPQRG 485

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING----------- 305
              D ++   +M +YFK      AL LW++M ++ +   I  YN LI G           
Sbjct: 486 FVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAI 545

Query: 306 ------------------------FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
                                   +C  GD+  AF +  +M++  F PDV+T NTL+N L
Sbjct: 546 DKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGL 605

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           C  G+L++A   +    + G   D I+Y T+IQ LC   D+  A  F   M  + + P+ 
Sbjct: 606 CLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDV 665

Query: 402 HIWNVIIDGYGRCG----------DLSNAFSIRDLMLSFGVSSNVF-------------- 437
             +NV++      G           L+ +  +        + S+V               
Sbjct: 666 FTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDI 725

Query: 438 ------------TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
                       ++N  I     GG + +A ++  EM+  G+  D  TY  L+
Sbjct: 726 ESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLM 778



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 168/388 (43%), Gaps = 79/388 (20%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L+E L RL+ M + G     L  D   +  +I   C  G +  A  L  +M++ G   D 
Sbjct: 401 LEEALGRLEMMTEEG-----LTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDT 455

Query: 154 LTHNYLVNELCKIGDLEKADHVIR-----------------------------------E 178
            T N L+  LCK    E+A+ ++R                                   E
Sbjct: 456 FTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDE 515

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M + + +P+ +TYN  I G   + +L +A+   + +   G+ P+  T+NI++HA CK+G 
Sbjct: 516 MIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGD 575

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L  A +F  +++   +     DV+T   LM+     G   +A+ L+    +K  + D++ 
Sbjct: 576 LEKAFQFHNKMV---ENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVIT 632

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG----------KLD 348
           YN LI   C + D+ +A  +F  M  RG  PDV TYN LL+ L + G          KL+
Sbjct: 633 YNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLN 692

Query: 349 EASHFYGVL-----------SKTGVAP---------------DQISYKTIIQGLCIHGDI 382
           E+   YG              +TG  P               DQ SY   I+ LCI G +
Sbjct: 693 ESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQL 752

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            +A+  L  M++K +  +   +  +++G
Sbjct: 753 KEAKAVLDEMMQKGMSVDNSTYITLMEG 780



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 11/255 (4%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L E +D+L  + + G     L  D   +  +I   C  G +  A     KM++    PDV
Sbjct: 541 LTEAIDKLNELMEMG-----LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDV 595

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T N L+N LC  G LEKA  +     E     +  TYN  I   C+ N++D AL  F+ 
Sbjct: 596 VTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFAD 655

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G++P+  T+N+L+ AL + G   +A K L ++  ++ GK        +I   S  +
Sbjct: 656 MEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKL--NESGKLYGRFFYPSI--KSSVE 711

Query: 274 NGDKFQALALWNDMFQ-KNIQ-TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
             +  +   + +D+    N Q  D  +YN  I   C+ G +  A A   +M+++G   D 
Sbjct: 712 AVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDN 771

Query: 332 ITYNTLLNCLCKQGK 346
            TY TL+  L K+ K
Sbjct: 772 STYITLMEGLIKRQK 786



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 13/163 (7%)

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
           PH+   ++  + R G +  +    + +LS    S            T   +  DAF    
Sbjct: 152 PHLAAQLLHSFRRRGCVRPSLQAANAVLSALARS----------PSTSPQASLDAF---H 198

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            ++   + P+ +T+NLL+   C+ G +  AL    +M   G++PD +TY  L+  HC +G
Sbjct: 199 SLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKG 258

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            + EA  + A+++  G+      +  L   Y R+    +A D+
Sbjct: 259 MLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDV 301


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 225/444 (50%), Gaps = 3/444 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  L   G +  A  + +++ + G   +V T N +VN LCK G +EK    + ++ E 
Sbjct: 205 ALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEK 264

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  I+ Y     +++A  L + M   G  P   T+N +++ LCK G    A
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +   E+L    G +       ++LM++  K GD  +   +++DM  +++  D+V ++ +
Sbjct: 325 KEVFAEMLRS--GLSPDSTTYRSLLMEAC-KKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++ F  +G++  A  YF  + + G +PD + Y  L+   C++G +  A +    + + G 
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           A D ++Y TI+ GLC    + +A +    M E+++ P+ +   ++IDG+ + G+L NA  
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M    +  +V T+N L+    + G I  A  +  +M+   I P   +Y++L+ A C
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           + GH+  A +++DEM+ + I P ++    +IKG+C  GN  + E    K+ + G   D I
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621

Query: 543 PFRILKKRYRRMKESDKARDIHQK 566
            +  L   + R +   KA  + +K
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKK 645



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 212/420 (50%), Gaps = 5/420 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            VI  LC  GK   A  +  +M++ G  PD  T+  L+ E CK GD+ + + V  +M   
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   +++ ++ + R   LDKAL  F+++   G+ P+ V + IL+   C+KG++  A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E+L         DV+T   ++    K     +A  L+N+M ++ +  D     +L
Sbjct: 430 MNLRNEMLQQG---CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C  G++ +A   F +M ++    DV+TYNTLL+   K G +D A   +  +    +
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  ISY  ++  LC  G + +A      M+ K++ P   I N +I GY R G+ S+  S
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD--GIFPDVFTYNLLIGA 480
             + M+S G   +  ++N LI    R  ++  AF L K+M  +  G+ PDVFTYN ++  
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG 666

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    +  A  +  +M+ RG+ PD  TYT +I G  ++ N+ EA  +  ++   G + D
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 227/484 (46%), Gaps = 40/484 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  GK+        ++ +KG  PD++T+N L++     G +E+A  ++  M    
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP   TYN  I G C+  + ++A  +F+ M  +G+ P+  T+  L+   CKKG + +  
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K   ++ + D      D++  + +M  + ++G+  +AL  +N + +  +  D V Y +LI
Sbjct: 361 KVFSDMRSRD---VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G+C  G IS A     +ML++G   DV+TYNT+L+ LCK+  L EA   +  +++  + 
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD------- 416
           PD  +   +I G C  G++  A E    M EK +  +   +N ++DG+G+ GD       
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537

Query: 417 ----------------------------LSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
                                       L+ AF + D M+S  +   V   N++I    R
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR--GITPDI 506
            G+  D  S  ++M+ +G  PD  +YN LI       ++  A  L  +M     G+ PD+
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            TY  ++ G C +  MKEAE V  K+   G+  D   +  +   +       +A  IH +
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717

Query: 567 WLLR 570
            L R
Sbjct: 718 MLQR 721



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 205/398 (51%), Gaps = 5/398 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  L  D   + +++ + C  G +     +   M  +  VPD++  + +++   + G+L
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 391

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           +KA      + E    P+   Y   I GYCR   +  A++L + M   G   + VT+N +
Sbjct: 392 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +H LCK+ +LG+A K   E+    +     D  T TIL+D + K G+   A+ L+  M +
Sbjct: 452 LHGLCKRKMLGEADKLFNEM---TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K I+ D+V YN L++GF   GDI +A   +  M+ +  LP  I+Y+ L+N LC +G L E
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   +  +    + P  +   ++I+G C  G+      FL  M+ +  VP+   +N +I 
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIY 628

Query: 410 GYGRCGDLSNAFSIRDLM--LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           G+ R  ++S AF +   M     G+  +VFT+N+++    R   + +A  + ++M+  G+
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
            PD  TY  +I    +  ++  A +++DEML+RG +PD
Sbjct: 689 NPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 182/356 (51%), Gaps = 3/356 (0%)

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           NA I    R+  ++ A  ++  ++ +G+  N  T NI+V+ALCK G +     FL +V  
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV-- 261

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     D++T   L+ +Y   G   +A  L N M  K     +  YN +ING C +G 
Sbjct: 262 -QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK 320

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A   F +ML+ G  PD  TY +LL   CK+G + E    +  +    V PD + + +
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS 380

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++      G++ KA  +  S+ E  ++P+  I+ ++I GY R G +S A ++R+ ML  G
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
            + +V T+N ++    +   + +A  L  EM    +FPD +T  +LI   C LG++  A+
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +L+ +M  + I  D++TY  L+ G    G++  A+E++A + +  +    I + IL
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 21/325 (6%)

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++H L + G L DA   L  ++    G +  +++ S   +DS F N          ND  
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRS-GVSRLEIVNS---LDSTFSNCGS-------ND-- 165

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
                     +++LI  +     +  A   F  +  +GF   +   N L+  L + G ++
Sbjct: 166 --------SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVE 217

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            A   Y  +S++GV  +  +   ++  LC  G + K   FL  + EK V P+   +N +I
Sbjct: 218 LAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI 277

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
             Y   G +  AF + + M   G S  V+T+N +I    + G    A  +  EML  G+ 
Sbjct: 278 SAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 337

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PD  TY  L+  +C  G +    +++ +M  R + PD++ ++ ++      GN+ +A   
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 397

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRR 553
           F  ++  GL  D++ + IL + Y R
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQGYCR 422


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 224/449 (49%), Gaps = 6/449 (1%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D L+ M + G V C+   D   +  VI      G +  A  L ++M+Q+G  PD +T++ 
Sbjct: 203 DLLRMMAEGGAV-CS--PDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSS 259

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           +V+ LCK   ++KA+  +R+M      PN  TYN  I GY    +  +A+ +F  M  + 
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 319

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           I P+ VT ++L+ +LCK G + +A      +          +V + TI+++ Y   G   
Sbjct: 320 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ---NPNVFSYTIMLNGYATKGCLV 376

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
               L++ M    I  DI  +NVLI  +   G +  A   F +M   G  PDV+TY T++
Sbjct: 377 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             LC+ GK+D+A   +  +   GVAPD+ +Y  +IQG C HG ++KA+E +  ++   + 
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
            +   ++ II+   + G + +A +I DL ++ G+      ++ L+      G +  A  +
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
              M+  GI P+   Y  L+   C +G I   L L+ EML++GI P  I Y  +I G   
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 616

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G    A+  F ++   G+A++   + I+
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMNKCTYNIV 645



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 189/359 (52%), Gaps = 2/359 (0%)

Query: 187 NCATYNAFITGYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           N    N  + G+C     D+AL  L       G  P+  +++IL+ +LC +G  G A   
Sbjct: 145 NIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDL 204

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L  ++A+     + DV+  + ++D +FK GD  +A  L+ +M Q+ I  D V Y+ +++ 
Sbjct: 205 L-RMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHA 263

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C    +  A A+  QM+ +G LP+  TYN L+      G+  EA   +  + +  + PD
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++   ++  LC +G I +AR+   +M  K   P    + ++++GY   G L +   + D
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFD 383

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
           LML  G++ +++TFN LI A    G +  A  +  EM   G+ PDV TY  +I A C +G
Sbjct: 384 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            +  A++ +++M+ +G+ PD   Y  LI+G C  G++ +A+E+ ++I   G+ +D + F
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 502



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 219/448 (48%), Gaps = 6/448 (1%)

Query: 124 VIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  C   +   AL  L  +  + G VPDV +++ L+  LC  G   +AD ++R M+E 
Sbjct: 152 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211

Query: 183 RP--SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               SP+   Y+  I G+ +  +++KA  LF  M   GI P+ VT++ +VHALCK   + 
Sbjct: 212 GAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMD 271

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A  FL +++   +     +  T   L+  Y   G   +A+ ++ +M + +I  D+V  +
Sbjct: 272 KAEAFLRQMV---NKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 328

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +L+   C  G I  A   F  M  +G  P+V +Y  +LN    +G L + +  + ++   
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 388

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+APD  ++  +I+     G + KA      M +  V P+   +  +I    R G + +A
Sbjct: 389 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
               + M+  GV+ + + ++ LI      GS+  A  L  E++ +G+  D+  ++ +I  
Sbjct: 449 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 508

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C LG +  A  ++D  +  G+ P  + Y+ L+ G+C  G M++A  VF  + + G+  +
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWL 568
            + +  L   Y ++   D+   + ++ L
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREML 596



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 177/365 (48%), Gaps = 4/365 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           SP   TY   +    R +  + AL  F  +   G+R N +  N L+   C+     +A+ 
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALD 167

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI--QTDIVAYNVL 302
            L  +    +     DV + +IL+ S    G   QA  L   M +       D+VAY+ +
Sbjct: 168 IL--LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTV 225

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GF   GD++ A   F +M++RG  PD +TY+++++ LCK   +D+A  F   +   GV
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 285

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+  +Y  +I G    G   +A      M   S++P+    ++++    + G +  A  
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 345

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M   G + NVF++  ++      G + D   L   ML DGI PD++T+N+LI A  
Sbjct: 346 VFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYA 405

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           N G +  A+ +++EM   G+ PD++TY  +I   C  G M +A E F ++   G+A D  
Sbjct: 406 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 465

Query: 543 PFRIL 547
            +  L
Sbjct: 466 AYHCL 470



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 185/406 (45%), Gaps = 7/406 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G  PD+ T N L+      G L+KA  +  EM +    P+  TY   I   CR+ +
Sbjct: 385 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 444

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A+  F+ M + G+ P++  ++ L+   C  G L  A + + E++  ++G     V  
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIM--NNGMHLDIVFF 502

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           S+I+ ++  K G    A  +++      +    V Y++L++G+CL G +  A   F  M+
Sbjct: 503 SSII-NNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMV 561

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  P+ + Y TL+N  CK G++DE    +  + + G+ P  I Y  II GL   G  V
Sbjct: 562 SAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 621

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGY--GRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
            A+     M E  +      +N+++ G    RC D    F  ++L  +  V  N+ T N 
Sbjct: 622 PAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFD-EAIFLFKELR-AMNVKINIITLNT 679

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I    +   + +A  L   +   G+ P V TY+++I      G +  A  ++  M   G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             PD      +++    +  +  A    +KI     +++H+   +L
Sbjct: 740 CEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLL 785



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 140/293 (47%), Gaps = 3/293 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I +LC  G++  A  +    +  G  P  + ++ L++  C +G +EKA  V   M   
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   Y   + GYC++  +D+ L LF  M   GI+P+ + +NI++  L + G    A
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 623

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+   + G A +   T  I++   FKN    +A+ L+ ++   N++ +I+  N +
Sbjct: 624 KVKFHEM--TESGIAMNKC-TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 680

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G      +  A   F  + + G +P V+TY+ ++  L K+G ++EA   +  +   G 
Sbjct: 681 IAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 740

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            PD      +++ L    +IV+A  +L  + E++   E     +++D +   G
Sbjct: 741 EPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 42/263 (15%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT---GVAPDQISYKT 371
           A A+F Q+L+ G   ++I  N LL   C+  + DEA     +L +T   G  PD  SY  
Sbjct: 130 ALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI--LLHRTPELGCVPDVFSYSI 187

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLS 429
           +++ LC  G   +A + L  M E   V  P +  ++ +IDG+ + GD++ A         
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACD------- 240

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
                                       L KEM+  GI PD  TY+ ++ A C    +  
Sbjct: 241 ----------------------------LFKEMVQRGIPPDFVTYSSVVHALCKARAMDK 272

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A     +M+ +G+ P+  TY  LI G+ + G  KEA  VF +++   +  D +   +L  
Sbjct: 273 AEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMG 332

Query: 550 RYRRMKESDKARDIHQKWLLRNK 572
              +  +  +ARD+     ++ +
Sbjct: 333 SLCKYGKIKEARDVFDTMAMKGQ 355



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 100/230 (43%), Gaps = 3/230 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C  G+I   L L R+M+QKG  P  + +N +++ L + G    A     EM+E  
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            + N  TYN  + G  +    D+A+ LF  +    ++ N +T N ++  + +   + +A 
Sbjct: 635 IAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAK 694

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
                +           V+T +I++ +  K G   +A  +++ M     + D    N ++
Sbjct: 695 DLFASI---SRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 751

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
                  +I  A AY  ++ +R F  + +T   L++    +G   E   F
Sbjct: 752 RELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRF 801


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 211/434 (48%), Gaps = 8/434 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D +    VI  LC  G+I  A  L  +M+ +    D L   YL++ LC++G +++A  
Sbjct: 267 EPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA-- 324

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL-FSTMANNGIRPNRVTHNILVHAL 233
             R M    P+PN   YN  I GY      ++A  L +  M   G  P+  T NI++  L
Sbjct: 325 --RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGL 382

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CKKG L  A++FL E++         +VIT TIL+D + K G   +A  + N M  K + 
Sbjct: 383 CKKGYLVSALEFLDEMVKKG---FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLS 439

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            + V YN LI   C +G I  A   + +M  +G  PD+ T+N+L+  LCK  K++EA   
Sbjct: 440 LNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGL 499

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  +   GV  + ++Y T+I        I +A + +  M  +    +   +N +I    +
Sbjct: 500 YRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCK 559

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G       + + M    +  ++ + N LI +  R G + DA    ++M+  G+ PD+ T
Sbjct: 560 TGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVT 619

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN LI   C +G    AL L++ +  +GI PD +TY  LI  +C  G   +A ++  K  
Sbjct: 620 YNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGV 679

Query: 534 TLGLAIDHIPFRIL 547
           + G   + I + IL
Sbjct: 680 SNGFIPNEITWSIL 693



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 212/458 (46%), Gaps = 29/458 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            V++  C+  ++ +A  L R M + G VP+ + +  L++ L +   + +A  ++ EM  M
Sbjct: 205 VVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLM 264

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  T+N  I G C+   + +A  L   M       + +    L+H LC+ G + +A
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324

Query: 243 VKFLGEVLADD--------DGKATS---------------------DVITSTILMDSYFK 273
              L ++   +        +G   S                     D  T  I++D   K
Sbjct: 325 RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCK 384

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G    AL   ++M +K  + +++ Y +LI+GFC  G    A      M  +G   + + 
Sbjct: 385 KGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVG 444

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN L+  LCK GK+ +A   YG +S  G  PD  ++ ++I GLC +  + +A      ML
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            + V+     +N +I  + R   +  A  +   M   G   +  T+N LI A  + G+  
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
               L ++M  + IFP + + N+LI + C  G ++ ALQ   +M++RG+TPDI+TY  LI
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            G C  G  +EA  +F  +Q  G+  D + +  L  RY
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRY 662



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 213/464 (45%), Gaps = 20/464 (4%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           LK M+D G   C  +      + ++R     G  G A  L   M              +V
Sbjct: 117 LKQMKDEG---CVFKESL--FILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVV 171

Query: 161 NELCKIGDLEK-ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
            E+   G+  K A +V  +M     SP   T+   +  +C VNE+D A  L   M  +G 
Sbjct: 172 LEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGC 231

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVL---ADDDGKATSDVITSTILMDSYFKNGD 276
            PN + + +L+HAL +   + +A+K L E+     + D +  +DVI          K G 
Sbjct: 232 VPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLC------KAGR 285

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A  L + M  ++   D +    L++G C  G +  A A    ML +   P+ + YNT
Sbjct: 286 IHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARA----MLSKIPNPNTVLYNT 341

Query: 337 LLNCLCKQGKLDEASHF-YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           L+N     G+ +EA    Y  +   G  PD  ++  +I GLC  G +V A EFL  M++K
Sbjct: 342 LINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK 401

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
              P    + ++IDG+ + G    A  + + M + G+S N   +N LI A  + G I DA
Sbjct: 402 GFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDA 461

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             +  EM   G  PD++T+N LI   C    +  AL LY +ML  G+  + +TY  LI  
Sbjct: 462 LQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHA 521

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
                 +++A+++  +++  G  +D+I +  L K   +   ++K
Sbjct: 522 FLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEK 565



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 161/322 (50%), Gaps = 5/322 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V+   E +   +  +I   C  G    A  +   M  KG   + + +N L+  LCK G +
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           + A  +  EMS     P+  T+N+ I G C+ +++++AL L+  M   G+  N VT+N L
Sbjct: 459 QDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTL 518

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +HA  +  L+  A K +GE+          D IT   L+ +  K G   + L L   MF 
Sbjct: 519 IHAFLRLELIQQADKLVGEMRFRG---CPLDNITYNGLIKALCKTGATEKCLGLIEQMFG 575

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           + I   I + N+LIN FC  G ++ A  +   M++RG  PD++TYN+L+N LCK G+  E
Sbjct: 576 EEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A + +  L   G+ PD ++Y T+I   C  G    A + L   +    +P    W+++I+
Sbjct: 636 ALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILIN 695

Query: 410 GYGRCGDLSNAFSIRDLMLSFG 431
            + +    S  F+I  LM ++G
Sbjct: 696 YFVKNNSDSEQFTI--LMGNWG 715



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 173/380 (45%), Gaps = 6/380 (1%)

Query: 82  NPQAV-FNAL--DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
           NP  V +N L    ++    +  K +     V    E D      +I  LC  G + +AL
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
               +M++KG  P+V+T+  L++  CK G  E+A  V+  MS    S N   YN  I   
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           C+  ++  AL ++  M++ G +P+  T N L++ LCK   + +A+    ++L +      
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEG---VI 509

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           ++ +T   L+ ++ +     QA  L  +M  +    D + YN LI   C  G        
Sbjct: 510 ANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGL 569

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             QM      P + + N L+N  C+ GK+++A  F   + + G+ PD ++Y ++I GLC 
Sbjct: 570 IEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCK 629

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G   +A      +  K + P+   +N +I  Y   G  ++A  +    +S G   N  T
Sbjct: 630 MGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEIT 689

Query: 439 FNALILAETRGGSIFDAFSL 458
           ++ LI    +  S  + F++
Sbjct: 690 WSILINYFVKNNSDSEQFTI 709



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 110/459 (23%), Positives = 195/459 (42%), Gaps = 55/459 (11%)

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           +Q+G +     +  L+++L  +G+ +  D ++++M +       + +   +  Y +    
Sbjct: 86  LQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLP 145

Query: 205 DKALHLFSTMAN-NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD-VI 262
            +A  L   M       P   ++N+++  L    + G+  K    V  D   +  S  V 
Sbjct: 146 GQATRLLLDMWGVYCFEPTFKSYNVVLEIL----VAGNCPKVAPNVFYDMLSRGISPTVY 201

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T  ++M ++    +   A +L  DM +     + + Y +LI+    N  ++ A     +M
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
              G  PDV T+N +++ LCK G++ EA+  +  +       D +    ++ GLC  G +
Sbjct: 262 FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKV 321

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL----MLSFGVSSNVFT 438
            +AR    +ML K   P   ++N +I+GY   G    A   +DL    M+  G   + FT
Sbjct: 322 DEAR----AMLSKIPNPNTVLYNTLINGYVVSGRFEEA---KDLLYKNMVIAGFEPDAFT 374

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY------------------------ 474
           FN +I    + G +  A     EM+  G  P+V TY                        
Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMS 434

Query: 475 -----------NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
                      N LIGA C  G I  ALQ+Y EM  +G  PDI T+  LI G C    M+
Sbjct: 435 AKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKME 494

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRM---KESDK 559
           EA  ++  +   G+  + + +  L   + R+   +++DK
Sbjct: 495 EALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADK 533



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 7/248 (2%)

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L+RG++     Y  L++ L   G+          +   G    +  +  I++     G  
Sbjct: 86  LQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLP 145

Query: 383 VKAREFLLSMLEKSVV-PEPHIWNVIID--GYGRCGDLS-NAFSIRDLMLSFGVSSNVFT 438
            +A   LL M       P    +NV+++    G C  ++ N F     MLS G+S  V+T
Sbjct: 146 GQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYD---MLSRGISPTVYT 202

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           F  ++ A      +  A SL ++M   G  P+   Y +LI A      ++ A++L +EM 
Sbjct: 203 FGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMF 262

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             G  PD+ T+ ++I G C  G + EA ++  ++       D +    L     RM + D
Sbjct: 263 LMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVD 322

Query: 559 KARDIHQK 566
           +AR +  K
Sbjct: 323 EARAMLSK 330


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 216/475 (45%), Gaps = 67/475 (14%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L ++M+  G  P +LT N L+N L K G + +A+ ++ ++ +   SP+  TY + I G+C
Sbjct: 185 LYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHC 244

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT- 258
           R   LD A  +F  M   G  PN VT++ L++ LC +G + +A+  L E++         
Sbjct: 245 RNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVY 304

Query: 259 -------------------------------SDVITSTILMDSYFKNGDKFQALALWNDM 287
                                           +V T T L+    + G    A+ L++ M
Sbjct: 305 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 364

Query: 288 FQKNIQTDIVAYNVLIN-----------------------------------GFCLNGDI 312
            ++ +  + V YN LIN                                   G CL GDI
Sbjct: 365 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 424

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A   F +MLK G LP V+TYNTL+N    +G ++ A+    ++ + G  PD+ +Y  +
Sbjct: 425 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNEL 484

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           + G    G +  A  +   M+E  + P P  +  +IDG+ + G +  A S+   M   G 
Sbjct: 485 VSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGC 544

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           + NV ++NA+I   ++     +A  +  +M+  G+ P+V TY  LI   C  G    A +
Sbjct: 545 NPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFK 604

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++ +M +R   P++ TY+ LI G C  G   EAE +  +++  GLA D + F  L
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 659



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 210/433 (48%), Gaps = 3/433 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  G++  AL +  +MI+KG  P V T+   +  LC I   E+A  ++  M 
Sbjct: 271 YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMK 330

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  TY A I+G  R+ +L+ A+ L+  M   G+ PN VT+N L++ LC  G   
Sbjct: 331 KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFS 390

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A+K    +   +   + ++  T   ++      GD  +A+ L+  M +      +V YN
Sbjct: 391 TALKIFHWM---EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 447

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LING+   G++++A      M + G  PD  TYN L++   K GKL+ AS ++  + + 
Sbjct: 448 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 507

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+ +SY  +I G    G +  A   L  M E    P    +N +I+G  +    S A
Sbjct: 508 GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEA 567

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             I D M+  G+  NV T+  LI    R G    AF +  +M      P+++TY+ LI  
Sbjct: 568 EKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 627

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  G    A  L  EM R+G+ PD +T+T LI G    G +  A  +  ++  +G   +
Sbjct: 628 LCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPN 687

Query: 541 HIPFRILKKRYRR 553
           +  + +L K  ++
Sbjct: 688 YRTYSVLLKGLQK 700



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 177/380 (46%), Gaps = 3/380 (0%)

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           ++ +    + E+S M    +  + N  +    +   ++ A +L+  M N+GI+P+ +T N
Sbjct: 143 EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFN 202

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            L++ L KKG + +A   L ++   D    + DV T T L+  + +N +   A  +++ M
Sbjct: 203 TLINILSKKGKVREAELILSQIFQYD---LSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 259

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            ++    + V Y+ LING C  G +  A     +M+++G  P V TY   +  LC     
Sbjct: 260 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 319

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           +EA      + K G  P+  +Y  +I GL   G +  A      ML++ +VP    +N +
Sbjct: 320 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 379

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I+     G  S A  I   M   G  +N  T+N +I     GG I  A  L ++ML  G 
Sbjct: 380 INELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 439

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            P V TYN LI      G+++ A +L D M   G  PD  TY EL+ G    G ++ A  
Sbjct: 440 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 499

Query: 528 VFAKIQTLGLAIDHIPFRIL 547
            F ++   GL  + + +  L
Sbjct: 500 YFQEMVECGLNPNPVSYTAL 519



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 136/307 (44%), Gaps = 36/307 (11%)

Query: 266 ILMDSYFKNGDKFQALA-LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           ILM    +N ++ + +A   N++        + + N L+        +  A   + QML 
Sbjct: 132 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 191

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHF------------------------------- 353
            G  P ++T+NTL+N L K+GK+ EA                                  
Sbjct: 192 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 251

Query: 354 -YGV---LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
            +GV   + K G  P+ ++Y T+I GLC  G + +A + L  M+EK + P  + + + I 
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 311

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
                     A  +   M   G   NV T+ ALI   +R G +  A  L  +ML +G+ P
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 371

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +  TYN LI   C  G    AL+++  M   G   +  TY E+IKG C  G++++A  +F
Sbjct: 372 NTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF 431

Query: 530 AKIQTLG 536
            K+  +G
Sbjct: 432 EKMLKMG 438



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 3/222 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+ +A +  ++M++ G  P+ +++  L++   K G ++ A  +++ M EM  +PN  +Y
Sbjct: 492 GKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESY 551

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           NA I G  + N   +A  +   M   G+ PN +T+  L+  LC+ G    A K   ++  
Sbjct: 552 NAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM-- 609

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            +  K   ++ T + L+    + G   +A  L  +M +K +  D V +  LI+GF + G 
Sbjct: 610 -EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGR 668

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
           I  AF    +M+  G  P+  TY+ LL  L K+  L E   F
Sbjct: 669 IDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLEEKIF 710



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 105/225 (46%)

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
           + ++   + F   +S  G      S  T++  L     +  AR     ML   + P    
Sbjct: 141 EEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLT 200

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N +I+   + G +  A  I   +  + +S +VFT+ +LIL   R  ++  AF +   M+
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV 260

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
            +G  P+  TY+ LI   CN G +  AL + +EM+ +GI P + TYT  I   CA  + +
Sbjct: 261 KEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 320

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           EA E+ A+++  G   +   +  L     R+ + + A  ++ K L
Sbjct: 321 EAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 365



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 65/119 (54%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  G+   A  +   M ++  +P++ T++ L+  LC+ G  ++A+ +++EM 
Sbjct: 586 YTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEME 645

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
               +P+  T+ + I G+  +  +D A  L   M + G +PN  T+++L+  L K+ LL
Sbjct: 646 RKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLL 704


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 227/447 (50%), Gaps = 3/447 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G I  A  +  K+++ G VPD +T   L   LC  G +++A     ++  + 
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  +Y   I G C+V E   AL L   +  N ++PN V +N ++ ++CK  L+ +A 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+++      + DV+T + L+  +   G    A+ L+N M  +NI+ D+  +N+L+
Sbjct: 246 DLFSEMVSKG---ISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILV 302

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           N FC +G +      F  M+K+G  P+ +TYN+L++  C   ++++A   +  +++ GV 
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVN 362

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  SY  +I G C      +A      M  K+++P+   ++ +IDG  + G +S A  +
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M   GV  N+ T+N+++ A  +   +  A +L  +    G  PD+ TY++LI   C 
Sbjct: 423 VDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQ 482

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A ++++++L +G   D+  YT +I+G C  G   EA  + +K++  G   D   
Sbjct: 483 SGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKT 542

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           + I+     +  E+D A  + ++ + R
Sbjct: 543 YEIIILSLFKKDENDMAEKLLREMIAR 569



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 211/412 (51%), Gaps = 3/412 (0%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T L+L +KM  +G  P+++  N L+N  C++G +  A  V  ++ +M   P+  T+    
Sbjct: 103 TVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLS 162

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   ++ +A      +   G   +++++  L+H LCK G    A+  L  V   D  
Sbjct: 163 KGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV---DGN 219

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               +V+    ++DS  K     +A  L+++M  K I  D+V Y+ LI+GFC+ G +  A
Sbjct: 220 LVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDA 279

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F +M+     PDV T+N L+N  CK GK+ E    + ++ K G+ P+ ++Y +++ G
Sbjct: 280 IDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDG 339

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C+  ++ KA+    +M +  V P+   ++++I+G+ +      A ++   M    +  +
Sbjct: 340 YCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           V T+++LI   ++ G I  A  L  +M   G+ P++ TYN ++ A C    +  A+ L  
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLT 459

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +   +G  PDI TY+ LIKG C  G +++A +VF  +   G  +D   + I+
Sbjct: 460 KFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIM 511



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 212/415 (51%), Gaps = 3/415 (0%)

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           + LCL G+I  A     K++  G   D +++  L++ LCK+G+   A  +++ +      
Sbjct: 163 KGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQ 222

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           PN   YN  I   C+V  +++A  LFS M + GI P+ VT++ L+   C  G L DA+  
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDL 282

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             +++ ++      DV T  IL++++ K+G   +   +++ M ++ I+ + V YN L++G
Sbjct: 283 FNKMILEN---IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDG 339

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           +CL  +++ A + F  M + G  PD+ +Y+ ++N  CK  K DEA + +  + +  + PD
Sbjct: 340 YCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++Y ++I GL   G I  A + +  M ++ V P    +N I+D   +   +  A ++  
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLT 459

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
                G   ++ T++ LI    + G + DA  + +++L+ G   DV+ Y ++I   C  G
Sbjct: 460 KFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEG 519

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             + AL L  +M   G  PD  TY  +I     +     AE++  ++   GL ++
Sbjct: 520 LFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLN 574



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 174/359 (48%), Gaps = 8/359 (2%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           ++ E  D    M   G     +  D   + A+I   C+ GK+  A+ L  KMI +   PD
Sbjct: 240 LVNEAFDLFSEMVSKG-----ISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPD 294

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V T N LVN  CK G +++   V   M +    PN  TYN+ + GYC V E++KA  +F+
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFN 354

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
           TMA  G+ P+  +++I+++  CK     +A+    E+   +      DV+T + L+D   
Sbjct: 355 TMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN---IIPDVVTYSSLIDGLS 411

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K+G    AL L + M  + +  +I  YN +++  C    +  A A   +   +GF PD+ 
Sbjct: 412 KSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDIS 471

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TY+ L+  LC+ GKL++A   +  L   G   D  +Y  +IQG C+ G   +A   L  M
Sbjct: 472 TYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKM 531

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
            +   +P+   + +II    +  +   A  +   M++ G+  N +      LA+T  G+
Sbjct: 532 EDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFYDLYLTRLAQTWHGT 590



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 169/305 (55%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           ++ S  K+      L L   M  + I+ ++V  N+LIN FC  G I  AF+ F ++LK G
Sbjct: 91  ILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMG 150

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           ++PD IT+ TL   LC +G++ +A  F+  +   G   DQISY T+I GLC  G+   A 
Sbjct: 151 YVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAAL 210

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + L  +    V P   ++N IID   +   ++ AF +   M+S G+S +V T++ALI   
Sbjct: 211 DLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGF 270

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + DA  L  +M+L+ I PDV+T+N+L+ A C  G +     ++D M+++GI P+ 
Sbjct: 271 CILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNF 330

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +TY  L+ G+C    + +A+ +F  +   G+  D   + I+   + ++K+ D+A ++ ++
Sbjct: 331 VTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKE 390

Query: 567 WLLRN 571
              +N
Sbjct: 391 MHRKN 395



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 187/400 (46%), Gaps = 3/400 (0%)

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           D++ A  +   +     +P    +N  +    +       L+L   M   GI+PN V  N
Sbjct: 65  DVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           IL++  C+ GL+  A     ++L         D IT T L       G   QA    + +
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILK---MGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKV 181

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
                  D ++Y  LI+G C  G+  +A     ++      P+V+ YNT+++ +CK   +
Sbjct: 182 VALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLV 241

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           +EA   +  +   G++PD ++Y  +I G CI G +  A +    M+ +++ P+ + +N++
Sbjct: 242 NEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNIL 301

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           ++ + + G +    ++ D+M+  G+  N  T+N+L+        +  A S+   M   G+
Sbjct: 302 VNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV 361

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PD+ +Y+++I   C +     A+ L+ EM R+ I PD++TY+ LI G    G +  A +
Sbjct: 362 NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQ 421

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           +  ++   G+  +   +  +     +  + DKA  +  K+
Sbjct: 422 LVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKF 461


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 231/453 (50%), Gaps = 8/453 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I++LC   ++  A  + +KM+  G  PD+ T++ +++ LCK   ++KA+ V+ +M E 
Sbjct: 250 SIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEA 309

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN+ I GY      ++++ +F  M++ G+ P     N  +HAL K G   +A
Sbjct: 310 GTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEA 369

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA--LWNDMFQKNIQTDIVAYN 300
                 ++         D+I+ + ++  Y    D   A    ++N M  K I  +   +N
Sbjct: 370 KCIFDSMVLKG---PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFN 426

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LIN +   G +  A   F  M  +G +PD +T+ T+++ LC+ G+LD+A H +  +   
Sbjct: 427 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 486

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLS 418
           GV P +  Y  +IQG C HG++VKA+E +  M+ K  +P P +  ++ II+   + G ++
Sbjct: 487 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-IPPPGVKYFSSIINNLCKEGRVA 545

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
               I D+M+  G   NV TFN+L+      G++ +AF+L   M   GI P+ + Y  L+
Sbjct: 546 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 605

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G I  AL ++ +ML +G+ P  + Y+ ++ G         A+++F ++   G  
Sbjct: 606 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 665

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           +    + ++     R   +D+A  + +K    N
Sbjct: 666 VSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 698



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 197/412 (47%), Gaps = 6/412 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD--LEKADHVIREMSEMRPSPNCA 189
           G+   A  +   M+ KG  PD+++++ +++      D  L    ++   M     +PN  
Sbjct: 364 GRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKH 423

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            +N  I  Y R   +DKA+ +F  M N G+ P+ VT   ++ +LC+ G L DA+     +
Sbjct: 424 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 483

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY-NVLINGFCL 308
           +  D G   S+ +    L+     +G+  +A  L ++M  K+I    V Y + +IN  C 
Sbjct: 484 V--DIGVPPSEAVYGC-LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCK 540

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G ++        M++ G  P+V+T+N+L+   C  G ++EA      ++  G+ P+   
Sbjct: 541 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 600

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y T++ G C +G I  A      ML K V P   ++++I+ G  +    + A  +   M+
Sbjct: 601 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 660

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G + ++ T+  ++    R     +A  L +++    +  D+ T+N++I A   +G   
Sbjct: 661 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 720

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            A +L+D +   G+ P+I TY+ +I       + +EA+ +F  ++  G A D
Sbjct: 721 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASD 772



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 173/403 (42%), Gaps = 40/403 (9%)

Query: 186 PNCATYNAFITGYCRVN----------------------------------ELDKALHLF 211
           P   TYN  I  Y RV+                                  E+DKA  LF
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKAHCLF 233

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M   G+ P  +  N ++  LCK   +  A   + +++   D     D+ T ++++D  
Sbjct: 234 LEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV---DSGIAPDLFTYSLIIDGL 290

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K+    +A  +   M +   + + + YN LI+G+ ++G  + +   F QM   G +P V
Sbjct: 291 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 350

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD--IVKAREFL 389
              N+ ++ L K G+ +EA   +  +   G  PD ISY T++ G     D  +       
Sbjct: 351 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIF 410

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             ML K + P  H++N++I+ Y RCG +  A  I + M + G+  +  TF  +I +  R 
Sbjct: 411 NLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRI 470

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + DA      M+  G+ P    Y  LI   CN G +  A +L  EM+ + I P  + Y
Sbjct: 471 GRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 530

Query: 510 -TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            + +I   C  G + E +++   +   G   + + F  L + Y
Sbjct: 531 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 573



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 145/293 (49%), Gaps = 3/293 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I +LC  G++     +   M+Q G  P+V+T N L+   C +G++E+A  ++  M+ +
Sbjct: 533 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 592

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PNC  Y   + GYC+   +D AL +F  M + G++P  V ++I++H L +      A
Sbjct: 593 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 652

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   E++   +   T  + T  +++    +N    +A  L   +F  N++ DI+ +N++
Sbjct: 653 KKMFHEMI---ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV 709

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+     G    A   F  +   G +P++ TY+ ++  L K+   +EA + +  + K+G 
Sbjct: 710 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 769

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
           A D      I++ L    ++ KA  +L  + E ++  E    +++   + R G
Sbjct: 770 ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 822



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 144/304 (47%), Gaps = 11/304 (3%)

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T  IL+D Y +       LA+   + +  +  D  +Y+ LI GF  +G++  A   F +M
Sbjct: 178 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEM 236

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           +++G LP ++  N+++  LCK  ++D+A      +  +G+APD  +Y  II GLC    +
Sbjct: 237 MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAM 296

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA   L  M+E    P    +N +I GY   G  + +  +   M S GV   V   N+ 
Sbjct: 297 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 356

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA------SCNLGHIHLALQLYDE 496
           I A  + G   +A  +   M+L G  PD+ +Y+ ++        SC L  +H    +++ 
Sbjct: 357 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC-LADVH---NIFNL 412

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           ML +GI P+   +  LI  +   G M +A  +F  +Q  G+  D + F  +     R+  
Sbjct: 413 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 472

Query: 557 SDKA 560
            D A
Sbjct: 473 LDDA 476



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 42/282 (14%)

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P + TYN L++C  +  + D      G L K G+ PD  SY ++I G    G++ KA   
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 232

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
            L M+E+ V+P+  I N II    +  ++  A SI   M+  G++ ++FT++ +I    +
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG------------------ASCNL------ 484
             ++  A  + ++M+  G  P+  TYN LI                   +SC +      
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 485 -----------GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN--MKEAEEVFAK 531
                      G  + A  ++D M+ +G  PDII+Y+ ++ G+    +  + +   +F  
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 412

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLL 569
           + T G+A +   F IL   Y R    DKA     D+  K ++
Sbjct: 413 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMI 454


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 231/453 (50%), Gaps = 8/453 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I++LC   ++  A  + +KM+  G  PD+ T++ +++ LCK   ++KA+ V+ +M E 
Sbjct: 88  SIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEA 147

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN+ I GY      ++++ +F  M++ G+ P     N  +HAL K G   +A
Sbjct: 148 GTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEA 207

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA--LWNDMFQKNIQTDIVAYN 300
                 ++         D+I+ + ++  Y    D   A    ++N M  K I  +   +N
Sbjct: 208 KCIFDSMVLKG---PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFN 264

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LIN +   G +  A   F  M  +G +PD +T+ T+++ LC+ G+LD+A H +  +   
Sbjct: 265 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 324

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLS 418
           GV P +  Y  +IQG C HG++VKA+E +  M+ K  +P P +  ++ II+   + G ++
Sbjct: 325 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-IPPPGVKYFSSIINNLCKEGRVA 383

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
               I D+M+  G   NV TFN+L+      G++ +AF+L   M   GI P+ + Y  L+
Sbjct: 384 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 443

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G I  AL ++ +ML +G+ P  + Y+ ++ G         A+++F ++   G  
Sbjct: 444 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 503

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           +    + ++     R   +D+A  + +K    N
Sbjct: 504 VSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 536



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 198/412 (48%), Gaps = 6/412 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD--HVIREMSEMRPSPNCA 189
           G+   A  +   M+ KG  PD+++++ +++      D   AD  ++   M     +PN  
Sbjct: 202 GRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKH 261

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            +N  I  Y R   +DKA+ +F  M N G+ P+ VT   ++ +LC+ G L DA+     +
Sbjct: 262 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 321

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY-NVLINGFCL 308
           +  D G   S+ +    L+     +G+  +A  L ++M  K+I    V Y + +IN  C 
Sbjct: 322 V--DIGVPPSEAVYGC-LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCK 378

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G ++        M++ G  P+V+T+N+L+   C  G ++EA      ++  G+ P+   
Sbjct: 379 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 438

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y T++ G C +G I  A      ML K V P   ++++I+ G  +    + A  +   M+
Sbjct: 439 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 498

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G + ++ T+  ++    R     +A  L +++    +  D+ T+N++I A   +G   
Sbjct: 499 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 558

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            A +L+D +   G+ P+I TY+ +I       + +EA+ +F  ++  G A D
Sbjct: 559 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASD 610



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 173/403 (42%), Gaps = 40/403 (9%)

Query: 186 PNCATYNAFITGYCRVN----------------------------------ELDKALHLF 211
           P   TYN  I  Y RV+                                  E+DKA  LF
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKAHCLF 71

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M   G+ P  +  N ++  LCK   +  A   + +++   D     D+ T ++++D  
Sbjct: 72  LEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV---DSGIAPDLFTYSLIIDGL 128

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K+    +A  +   M +   + + + YN LI+G+ ++G  + +   F QM   G +P V
Sbjct: 129 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 188

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD--IVKAREFL 389
              N+ ++ L K G+ +EA   +  +   G  PD ISY T++ G     D  +       
Sbjct: 189 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIF 248

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             ML K + P  H++N++I+ Y RCG +  A  I + M + G+  +  TF  +I +  R 
Sbjct: 249 NLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRI 308

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + DA      M+  G+ P    Y  LI   CN G +  A +L  EM+ + I P  + Y
Sbjct: 309 GRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 368

Query: 510 -TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            + +I   C  G + E +++   +   G   + + F  L + Y
Sbjct: 369 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 411



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 145/293 (49%), Gaps = 3/293 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I +LC  G++     +   M+Q G  P+V+T N L+   C +G++E+A  ++  M+ +
Sbjct: 371 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 430

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PNC  Y   + GYC+   +D AL +F  M + G++P  V ++I++H L +      A
Sbjct: 431 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 490

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   E++   +   T  + T  +++    +N    +A  L   +F  N++ DI+ +N++
Sbjct: 491 KKMFHEMI---ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV 547

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+     G    A   F  +   G +P++ TY+ ++  L K+   +EA + +  + K+G 
Sbjct: 548 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 607

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
           A D      I++ L    ++ KA  +L  + E ++  E    +++   + R G
Sbjct: 608 ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 660



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 144/304 (47%), Gaps = 11/304 (3%)

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T  IL+D Y +       LA+   + +  +  D  +Y+ LI GF  +G++  A   F +M
Sbjct: 16  TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEM 74

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           +++G LP ++  N+++  LCK  ++D+A      +  +G+APD  +Y  II GLC    +
Sbjct: 75  MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAM 134

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA   L  M+E    P    +N +I GY   G  + +  +   M S GV   V   N+ 
Sbjct: 135 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 194

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA------SCNLGHIHLALQLYDE 496
           I A  + G   +A  +   M+L G  PD+ +Y+ ++        SC L  +H    +++ 
Sbjct: 195 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC-LADVH---NIFNL 250

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           ML +GI P+   +  LI  +   G M +A  +F  +Q  G+  D + F  +     R+  
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 310

Query: 557 SDKA 560
            D A
Sbjct: 311 LDDA 314



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 38/274 (13%)

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P + TYN L++C  +  + D      G L K G+ PD  SY ++I G    G++ KA   
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 70

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
            L M+E+ V+P+  I N II    +  ++  A SI   M+  G++ ++FT++ +I    +
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG------------------ASCNL------ 484
             ++  A  + ++M+  G  P+  TYN LI                   +SC +      
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 485 -----------GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN--MKEAEEVFAK 531
                      G  + A  ++D M+ +G  PDII+Y+ ++ G+    +  + +   +F  
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           + T G+A +   F IL   Y R    DKA  I +
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFE 284



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 1/100 (1%)

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P + TYN+LI     +    L L +   +L+ G+ PD  +Y+ LI G    G + +A  +
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 70

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           F ++   G+    +    + K   +MKE DKA  I QK +
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV 110


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 235/495 (47%), Gaps = 41/495 (8%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +   I  LC   +      + +KM  K   P+ +++N L+N   K G +  A 
Sbjct: 241 IQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVAT 300

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V  EM E+  SPN  TYN  I GYC     ++AL L   M  N +RPN VT   L++ L
Sbjct: 301 RVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGL 360

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K      A   L     +   + + + I+ T+++D   +NG   +A  L  +M +  + 
Sbjct: 361 YKSAKFDVARNILERYSIN---RTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVY 417

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DI+ ++VLINGFC  G+++ A     ++ + GF+P+ + ++TL+   CK G + E   F
Sbjct: 418 PDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKF 477

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  ++  G   D  +  +++  LC +G +V+A EFL  +    +VP    ++ II+GY  
Sbjct: 478 YAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYAN 537

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            GD S AFS+ D M+S G   + FT+ +L+    +G + ++A  L K++    +  D  +
Sbjct: 538 VGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTIS 597

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH-------CA-------- 518
           YN LI      G++  A++L++EM++  I PD  TYT ++ G        CA        
Sbjct: 598 YNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLM 657

Query: 519 ---------------------RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
                                 G  K A  +F +++  GL++D I    +   Y RM + 
Sbjct: 658 QKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKV 717

Query: 558 DKARDIHQKWLLRNK 572
             A  +  K   RNK
Sbjct: 718 FSASSLISK--TRNK 730



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 204/447 (45%), Gaps = 7/447 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR     G +G A+     M+ +G  P V T N ++  + K           ++M   R
Sbjct: 111 LIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSR 170

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN +++N  I+  C   +L KA+++ + M  NG  P  V++N L+   CKKG    A+
Sbjct: 171 VCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFAL 230

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             +  +   +     +DV T  + +DS  +N    Q   +   M  K I  + V+YN LI
Sbjct: 231 VLIHHM---ECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NGF   G I  A   F +M++    P++ITYN L+N  C  G  +EA     V+    V 
Sbjct: 288 NGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVR 347

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFL--LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           P++++  T++ GL        AR  L   S+   S+    H   V+IDG  R G L  AF
Sbjct: 348 PNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISH--TVMIDGLCRNGLLDEAF 405

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   M   GV  ++ TF+ LI    + G++  A  +  ++  +G  P+   ++ LI  S
Sbjct: 406 QLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNS 465

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C +G+++  ++ Y  M   G   D  T   L+   C  G + EAEE    I  +GL  + 
Sbjct: 466 CKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNS 525

Query: 542 IPFRILKKRYRRMKESDKARDIHQKWL 568
           + F  +   Y  + +   A  +  K +
Sbjct: 526 VTFDCIINGYANVGDGSGAFSVFDKMI 552



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 199/441 (45%), Gaps = 38/441 (8%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           ++M+     P+V + N L++ LC  G L+KA +++  M      P   +YN  ++  C+ 
Sbjct: 164 KQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKK 223

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
                AL L   M   GI+ +  T+N+ + +LC+          L ++    +   T + 
Sbjct: 224 GRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKM---RNKMITPNE 280

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           ++   L++ + K G    A  ++N+M + N+  +++ YN+LING+C+NG+   A      
Sbjct: 281 VSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDV 340

Query: 322 MLKRGFLPDVITYNTL--------------------------LNC---------LCKQGK 346
           M      P+ +T  TL                          LNC         LC+ G 
Sbjct: 341 MEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGL 400

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           LDEA      + K GV PD I++  +I G C  G++ KA+E +  +  +  VP   I++ 
Sbjct: 401 LDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFST 460

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +I    + G++         M   G +++ FT N+L+ +    G + +A      +   G
Sbjct: 461 LIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIG 520

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           + P+  T++ +I    N+G    A  ++D+M+  G  P   TY  L+K  C   N  EA 
Sbjct: 521 LVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEAR 580

Query: 527 EVFAKIQTLGLAIDHIPFRIL 547
           ++  K+  + LA+D I +  L
Sbjct: 581 KLLKKLHCIPLAVDTISYNTL 601



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 201/444 (45%), Gaps = 4/444 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  +I  LC  G +  A  L  +M + G  PD++T + L+N  CK+G+L KA  V+ ++ 
Sbjct: 388 HTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIY 447

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN   ++  I   C+V  + + +  ++ M  NG   +  T N LV +LC+ G L 
Sbjct: 448 REGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLV 507

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +FL  +          + +T   +++ Y   GD   A ++++ M           Y 
Sbjct: 508 EAEEFLHHI---SRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYG 564

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L+   C   +   A     ++       D I+YNTL+  + K G L EA   +  + + 
Sbjct: 565 SLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQN 624

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP-EPHIWNVIIDGYGRCGDLSN 419
            + PD  +Y  I+ GL   G +V A  FL  +++K ++     ++   IDG  + G    
Sbjct: 625 NILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKA 684

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +   M   G+S ++   N++    +R G +F A SL  +     + P++ T+N+L+ 
Sbjct: 685 ALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLH 744

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                  I    +LY+ M R G  P+ +TY  LI G C  G ++   ++          I
Sbjct: 745 GYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTI 804

Query: 540 DHIPFRILKKRYRRMKESDKARDI 563
           D + F +L ++   + + DK  D+
Sbjct: 805 DDLTFNMLIRKCCEINDLDKVIDL 828



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 177/392 (45%), Gaps = 38/392 (9%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR------------------------ 220
           S N A ++  I  Y R   +  A++ FS+M   G +                        
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWX 161

Query: 221 -----------PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
                      PN  + NIL+  LC +G L  AV  L   + + +G   + V  +T+L  
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNIL--TMMERNGYVPTIVSYNTLLSW 219

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K   KF AL L + M  K IQ D+  YN+ I+  C N   +  +    +M  +   P
Sbjct: 220 CCKKGRFKF-ALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITP 278

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           + ++YNTL+N   K+GK+  A+  +  + +  ++P+ I+Y  +I G CI+G+  +A   L
Sbjct: 279 NEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLL 338

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M    V P       +++G  +      A +I +       S N  +   +I    R 
Sbjct: 339 DVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRN 398

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + +AF L  EM  DG++PD+ T+++LI   C +G+++ A ++  ++ R G  P+ + +
Sbjct: 399 GLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIF 458

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           + LI   C  GN+ E  + +A +   G   D+
Sbjct: 459 STLIYNSCKVGNVYEGMKFYAAMNLNGQNADN 490



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 186/401 (46%), Gaps = 6/401 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KMI  G  P   T+  L+  LCK  +  +A  +++++  +  + +  +YN  I    +  
Sbjct: 550 KMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSG 609

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            L +A+ LF  M  N I P+  T+  ++  L ++G L  A  FLG ++  +    T + I
Sbjct: 610 NLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEI--LTLNSI 667

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             T  +D  FK G    AL L+ +M +K +  D++A N + +G+   G + SA +   + 
Sbjct: 668 VYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKT 727

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
             +  +P++ T+N LL+   +   +      Y ++ ++G  P++++Y ++I GLC HG +
Sbjct: 728 RNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGML 787

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
               + L   + +S   +   +N++I       DL     +   M  F VS +  T  A+
Sbjct: 788 ELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAV 847

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
                R     + F    EML  G  P    Y  ++   C +G I  A +L D+M+  GI
Sbjct: 848 TDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGI 907

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           + D      +++G    G ++EA  +  ++    L +  IP
Sbjct: 908 SLDDAAECAMVRGLALCGKIEEAMWILQRM----LRMKKIP 944



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 158/361 (43%), Gaps = 38/361 (10%)

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           N    ++L+    ++G++G AV     +L          V T  ++M S  KN       
Sbjct: 104 NPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRG---FKPSVYTCNMIMASMVKNCRAHLVW 160

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
             +  M    +  ++ ++N+LI+  C+ G +  A      M + G++P +++YNTLL+  
Sbjct: 161 XFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWC 220

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK+G+   A      +   G+  D  +Y   I  LC +    +    L  M  K + P  
Sbjct: 221 CKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNE 280

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +N +I+G+ + G +  A  + + M+   +S N+ T+N LI      G+  +A  L   
Sbjct: 281 VSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDV 340

Query: 462 M--------------LLDGIFP---------------------DVFTYNLLIGASCNLGH 486
           M              LL+G++                      +  ++ ++I   C  G 
Sbjct: 341 MEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGL 400

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A QL  EM + G+ PDIIT++ LI G C  GN+ +A+EV +KI   G   +++ F  
Sbjct: 401 LDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFST 460

Query: 547 L 547
           L
Sbjct: 461 L 461



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 164/350 (46%), Gaps = 3/350 (0%)

Query: 131  GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
             G+   AL+L ++M +KG   D++  N + +   ++G +  A  +I +       PN  T
Sbjct: 679  AGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTT 738

Query: 191  YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
            +N  + GY R  ++     L++ M  +G  PNR+T++ L+  LC  G+L   +K L   +
Sbjct: 739  FNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFI 798

Query: 251  ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
            A+    +T D +T  +L+    +  D  + + L ++M    +  D      + +      
Sbjct: 799  AES---STIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRM 855

Query: 311  DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
               + F +  +MLK+GF+P    Y T++  +C+ G +  A      +   G++ D  +  
Sbjct: 856  VSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAEC 915

Query: 371  TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
             +++GL + G I +A   L  ML    +P    +  ++  + +  +   A +++ LM  +
Sbjct: 916  AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHY 975

Query: 431  GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             V  ++  +N LI A    G +  A    +E+   G+ P++ TY +L+ A
Sbjct: 976  RVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSA 1025



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 154/352 (43%), Gaps = 24/352 (6%)

Query: 218 GIRPNRVTH--NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           G+ PN +TH   I  H L +  L G A   L  +   + G   S+ +   +LMD+Y    
Sbjct: 47  GLEPNHLTHILGITTHVLVRARLYGYAKSILKHLAQKNSG---SNFLFG-VLMDTY---- 98

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
                             ++   +++LI  +   G +  A   F  ML RGF P V T N
Sbjct: 99  --------------PLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCN 144

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            ++  + K  +      F+  +  + V P+  S+  +I  LC+ G + KA   L  M   
Sbjct: 145 MIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERN 204

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
             VP    +N ++    + G    A  +   M   G+ ++V T+N  I +  R       
Sbjct: 205 GYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQG 264

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           + + K+M    I P+  +YN LI      G I +A ++++EM+   ++P++ITY  LI G
Sbjct: 265 YLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILING 324

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           +C  GN +EA  +   ++   +  + +    L     +  + D AR+I +++
Sbjct: 325 YCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERY 376



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 105/254 (41%), Gaps = 38/254 (14%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++I  LC  G +   + + +  I + +  D LT N L+ + C+I DL+K   +   M   
Sbjct: 776  SLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVF 835

Query: 183  RPS-----------------------------------PNCATYNAFITGYCRVNELDKA 207
            R S                                   P    Y   +   CRV ++  A
Sbjct: 836  RVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGA 895

Query: 208  LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
              L   M   GI  +      +V  L   G + +A+  L  +L       TS   T T L
Sbjct: 896  FKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTS---TFTTL 952

Query: 268  MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
            M  + K  +  +A  L   M    ++ DIVAYNVLI+  C NGD+ +A  ++ ++ ++G 
Sbjct: 953  MHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGL 1012

Query: 328  LPDVITYNTLLNCL 341
            LP++ TY  L++ +
Sbjct: 1013 LPNMTTYRVLVSAI 1026



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 58/114 (50%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            A++R L L GKI  A+W+ ++M++   +P   T   L++  CK  + ++A ++   M   
Sbjct: 916  AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHY 975

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            R   +   YN  I+  C   ++  AL  +  +   G+ PN  T+ +LV A+  K
Sbjct: 976  RVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTK 1029


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 207/417 (49%), Gaps = 13/417 (3%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L  +M+++    D+ T N ++N  CK+G +++A   + +M +   SP+  T  +FI GYC
Sbjct: 179 LYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYC 238

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R  ++D A  +F  M N     N V++N L+H LC+ G + +AV     V   DD     
Sbjct: 239 RSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLF--VRMKDDC-CYP 291

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +V T T L+    +  +  +A+ L ++M ++N+  D++ YN LI G C  G + SA+   
Sbjct: 292 NVYTYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLL 350

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M +RG +PD  TY   ++ LCK  +++EA   +  L++ GV+ + I Y  +I G C  
Sbjct: 351 SLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKV 410

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G + +A      ML K+  P  + +N +I G    G+L  A S+ D M+  G+   V+TF
Sbjct: 411 GKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTF 470

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N LI    + G   DA    ++M+  G  P   TYN  I   C+ G +  A  +  +M  
Sbjct: 471 NILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKE 530

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF-----RILKKRY 551
            G+ PD  TYT LIK +   G    A +V   +        H  F     ++  KRY
Sbjct: 531 EGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRY 587



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 212/445 (47%), Gaps = 20/445 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G+I  A+ L  +M      P+V T+  L+  LC+  ++ KA  ++ EM E  
Sbjct: 264 LIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERN 322

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYN+ I G CR   LD A  L S M   G+ P++ T+   +  LCK   + +A 
Sbjct: 323 LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEAR 382

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +    +  +     +++VI  ++L+D Y K G   +A  L+  M  KN   +   +N LI
Sbjct: 383 RLFDSLTEEG---VSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALI 439

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G++  A + F QM+K G  P V T+N L+  + KQG  D+A      +  +G  
Sbjct: 440 HGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEK 499

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P   +Y   I+  C  G + +A + ++ M E+ V P+   +  +I  YG+ G   +AF +
Sbjct: 500 PVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDV 559

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI-----FPDVFTYNLLI 478
              M       +  TF +LI        +FD   + ++    G+     F DV   N+  
Sbjct: 560 LKSMFDADCEPSHHTFLSLI------KQLFDKRYVVEKSGETGVESVSNFGDVPGSNMW- 612

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
                +    + ++L++EM + G TPD   Y +LI G C   N+  A ++  ++Q  G++
Sbjct: 613 ----KMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGIS 668

Query: 539 IDHIPFRILKKRYRRMKESDKARDI 563
              + F  +     ++++  +A +I
Sbjct: 669 PSEMVFNAVISCCCKLQKYGEAANI 693



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 188/437 (43%), Gaps = 68/437 (15%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I+ LC    +  A+ L  +M+++  VPD++T+N L+   C+ G L+ A  ++  M 
Sbjct: 296 YTALIKGLC-RKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMK 354

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    P+  TY  FI   C+ N +++A  LF ++   G+  N + +++L+   CK G + 
Sbjct: 355 ERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVD 414

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A                                        L+  M  KN   +   +N
Sbjct: 415 EAG--------------------------------------CLFEKMLSKNCSPNAYTFN 436

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G C  G++  A + F QM+K G  P V T+N L+  + KQG  D+A      +  +
Sbjct: 437 ALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSS 496

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  P   +Y   I+  C  G + +A + ++ M E+ V P+   +  +I  YG+ G   +A
Sbjct: 497 GEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSA 556

Query: 421 FSIRDLMLSFGVSSNVFTFNALI--------LAETRGGSIFDAFS--------------- 457
           F +   M       +  TF +LI        + E  G +  ++ S               
Sbjct: 557 FDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMME 616

Query: 458 ------LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
                 L +EM   G  PD   Y  LI   C + ++ +AL+L D+M + GI+P  + +  
Sbjct: 617 FDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNA 676

Query: 512 LIKGHCARGNMKEAEEV 528
           +I   C      EA  +
Sbjct: 677 VISCCCKLQKYGEAANI 693



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 171/343 (49%), Gaps = 8/343 (2%)

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
           +N L+  L + GL+ +  +   E+L +     + D+ T  ++++ Y K G   +A     
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEE---FVSMDIYTFNLMINVYCKMGFVKEAKQFMC 216

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M Q  +  D       I G+C + D+ SAF  F +M  R    + ++YN L++ LC+ G
Sbjct: 217 KMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAG 272

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           ++DEA   +  +      P+  +Y  +I+GLC   ++ KA   L  MLE+++VP+   +N
Sbjct: 273 RIDEAVSLFVRMKDDCCYPNVYTYTALIKGLC-RKNVHKAMGLLDEMLERNLVPDLITYN 331

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            +I G  R G L +A+ +  LM   G+  +  T+   I    +   + +A  L   +  +
Sbjct: 332 SLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEE 391

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G+  +V  Y++LI   C +G +  A  L+++ML +  +P+  T+  LI G C+ GN+KEA
Sbjct: 392 GVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEA 451

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             +F ++  +GL      F IL  R  +  + D A    QK +
Sbjct: 452 LSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMM 494



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 111/463 (23%), Positives = 183/463 (39%), Gaps = 67/463 (14%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   + ++I   C  G + +A  L   M ++G VPD  T+   ++ LCK   +E+A 
Sbjct: 323 LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEAR 382

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   ++E   S N   Y+  I GYC+V ++D+A  LF  M +    PN  T N L+H L
Sbjct: 383 RLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGL 442

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C  G L                                       +AL+L++ M +  ++
Sbjct: 443 CSAGNLK--------------------------------------EALSLFDQMVKMGLK 464

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             +  +N+LI      GD   A     +M+  G  P   TYN  +   C  GK+ EA   
Sbjct: 465 PTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDM 524

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII----- 408
              + + GV PD  +Y ++I+     G    A + L SM +    P  H +  +I     
Sbjct: 525 MVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFD 584

Query: 409 -------------DGYGRCGDL--SNAFSIRDL---------MLSFGVSSNVFTFNALIL 444
                        +     GD+  SN + + +          M   G + +   +  LI 
Sbjct: 585 KRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLIS 644

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              +  ++  A  L  +M  +GI P    +N +I   C L     A  + ++M+  G +P
Sbjct: 645 GICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSP 704

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +     LI G    G  +    VF K++  G   D I ++IL
Sbjct: 705 QLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKIL 747



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 179/443 (40%), Gaps = 37/443 (8%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  M++ G     L  D R +   I  LC   ++  A  L   + ++G   +V+ ++ L+
Sbjct: 350 LSLMKERG-----LVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLI 404

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           +  CK+G +++A  +  +M     SPN  T+NA I G C    L +AL LF  M   G++
Sbjct: 405 DGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLK 464

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P   T NIL+  + K+G   DA K L ++++  +        T    ++ Y   G   +A
Sbjct: 465 PTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVAR---TYNAFIEVYCSAGKVQEA 521

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
             +   M ++ +  D   Y  LI  +   G   SAF     M      P   T+ +L+  
Sbjct: 522 EDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQ 581

Query: 341 LCKQGKLDEASHFYGV-----------------------------LSKTGVAPDQISYKT 371
           L  +  + E S   GV                             + K G  PD   Y+ 
Sbjct: 582 LFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEK 641

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G+C   ++  A + L  M ++ + P   ++N +I    +      A +I + M+  G
Sbjct: 642 LISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSG 701

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
            S  +     LI      G      S+ K++   G   D   + +LI      G +    
Sbjct: 702 HSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFS 761

Query: 492 QLYDEMLRRGITPDIITYTELIK 514
           QL++EM + G      TY+ L +
Sbjct: 762 QLFEEMEKNGCNFSPRTYSILTQ 784



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 134/292 (45%), Gaps = 10/292 (3%)

Query: 285 NDMFQKNIQTDIV-----AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           +D+ +K  + DI       YN L+      G +      + +ML+     D+ T+N ++N
Sbjct: 141 SDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMIN 200

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             CK G + EA  F   + + G++PD  +  + I G C   D+  A      M  ++ V 
Sbjct: 201 VYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVS 260

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +N +I G    G +  A S+   M       NV+T+ ALI    R  ++  A  L 
Sbjct: 261 ----YNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRK-NVHKAMGLL 315

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            EML   + PD+ TYN LI   C  GH+  A +L   M  RG+ PD  TY   I   C  
Sbjct: 316 DEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKS 375

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             ++EA  +F  +   G++ + I + +L   Y ++ + D+A  + +K L +N
Sbjct: 376 NRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKN 427



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 117/291 (40%), Gaps = 34/291 (11%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R + A I   C  GK+  A  +  +M ++G  PD  T+  L+    K+G    A  V++ 
Sbjct: 503 RTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKS 562

Query: 179 MSEMRPSPNCATYNAFI---------------TGYCRVN--------------ELDKALH 209
           M +    P+  T+ + I               TG   V+              E D  + 
Sbjct: 563 MFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIE 622

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           LF  M  +G  P+   +  L+  +CK   LG A+K L ++    +G + S+++ + ++  
Sbjct: 623 LFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQM--QKEGISPSEMVFNAVI-S 679

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K     +A  +  DM        +     LI G    G+     + F ++   G+  
Sbjct: 680 CCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYND 739

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           D I +  L++ + KQG ++E S  +  + K G      +Y  + Q L  HG
Sbjct: 740 DEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL--HG 788



 Score = 47.4 bits (111), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 48/99 (48%)

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN L+      G +    QLY EML   ++ DI T+  +I  +C  G +KEA++   K+ 
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
             GL+ D+         Y R K+ D A  + ++   RN+
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNE 258


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 231/453 (50%), Gaps = 8/453 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I++LC   ++  A  + +KM+  G  PD+ T++ +++ LCK   ++KA+ V+ +M E 
Sbjct: 230 SIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEA 289

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN+ I GY      ++++ +F  M++ G+ P     N  +HAL K G   +A
Sbjct: 290 GTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEA 349

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA--LWNDMFQKNIQTDIVAYN 300
                 ++         D+I+ + ++  Y    D   A    ++N M  K I  +   +N
Sbjct: 350 KCIFDSMVLKG---PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFN 406

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LIN +   G +  A   F  M  +G +PD +T+ T+++ LC+ G+LD+A H +  +   
Sbjct: 407 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 466

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLS 418
           GV P +  Y  +IQG C HG++VKA+E +  M+ K  +P P +  ++ II+   + G ++
Sbjct: 467 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-IPPPGVKYFSSIINNLCKEGRVA 525

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
               I D+M+  G   NV TFN+L+      G++ +AF+L   M   GI P+ + Y  L+
Sbjct: 526 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 585

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G I  AL ++ +ML +G+ P  + Y+ ++ G         A+++F ++   G  
Sbjct: 586 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 645

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           +    + ++     R   +D+A  + +K    N
Sbjct: 646 VSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 678



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 198/412 (48%), Gaps = 6/412 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD--HVIREMSEMRPSPNCA 189
           G+   A  +   M+ KG  PD+++++ +++      D   AD  ++   M     +PN  
Sbjct: 344 GRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKH 403

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            +N  I  Y R   +DKA+ +F  M N G+ P+ VT   ++ +LC+ G L DA+     +
Sbjct: 404 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 463

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY-NVLINGFCL 308
           +  D G   S+ +    L+     +G+  +A  L ++M  K+I    V Y + +IN  C 
Sbjct: 464 V--DIGVPPSEAVYGC-LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCK 520

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G ++        M++ G  P+V+T+N+L+   C  G ++EA      ++  G+ P+   
Sbjct: 521 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 580

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y T++ G C +G I  A      ML K V P   ++++I+ G  +    + A  +   M+
Sbjct: 581 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 640

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G + ++ T+  ++    R     +A  L +++    +  D+ T+N++I A   +G   
Sbjct: 641 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 700

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            A +L+D +   G+ P+I TY+ +I       + +EA+ +F  ++  G A D
Sbjct: 701 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASD 752



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 173/403 (42%), Gaps = 40/403 (9%)

Query: 186 PNCATYNAFITGYCRVN----------------------------------ELDKALHLF 211
           P   TYN  I  Y RV+                                  E+DKA  LF
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKAHCLF 213

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M   G+ P  +  N ++  LCK   +  A   + +++   D     D+ T ++++D  
Sbjct: 214 LEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV---DSGIAPDLFTYSLIIDGL 270

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K+    +A  +   M +   + + + YN LI+G+ ++G  + +   F QM   G +P V
Sbjct: 271 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 330

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD--IVKAREFL 389
              N+ ++ L K G+ +EA   +  +   G  PD ISY T++ G     D  +       
Sbjct: 331 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIF 390

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             ML K + P  H++N++I+ Y RCG +  A  I + M + G+  +  TF  +I +  R 
Sbjct: 391 NLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRI 450

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + DA      M+  G+ P    Y  LI   CN G +  A +L  EM+ + I P  + Y
Sbjct: 451 GRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 510

Query: 510 -TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            + +I   C  G + E +++   +   G   + + F  L + Y
Sbjct: 511 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 553



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 147/299 (49%), Gaps = 3/299 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I +LC  G++     +   M+Q G  P+V+T N L+   C +G++E+A  ++  M+ +
Sbjct: 513 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 572

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PNC  Y   + GYC+   +D AL +F  M + G++P  V ++I++H L +      A
Sbjct: 573 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 632

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   E++   +   T  + T  +++    +N    +A  L   +F  N++ DI+ +N++
Sbjct: 633 KKMFHEMI---ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV 689

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+     G    A   F  +   G +P++ TY+ ++  L K+   +EA + +  + K+G 
Sbjct: 690 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 749

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           A D      I++ L    ++ KA  +L  + E ++  E    +++   + R G +   F
Sbjct: 750 ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIKGLF 808



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 144/304 (47%), Gaps = 11/304 (3%)

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T  IL+D Y +       LA+   + +  +  D  +Y+ LI GF  +G++  A   F +M
Sbjct: 158 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEM 216

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           +++G LP ++  N+++  LCK  ++D+A      +  +G+APD  +Y  II GLC    +
Sbjct: 217 MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAM 276

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA   L  M+E    P    +N +I GY   G  + +  +   M S GV   V   N+ 
Sbjct: 277 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 336

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA------SCNLGHIHLALQLYDE 496
           I A  + G   +A  +   M+L G  PD+ +Y+ ++        SC L  +H    +++ 
Sbjct: 337 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC-LADVH---NIFNL 392

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           ML +GI P+   +  LI  +   G M +A  +F  +Q  G+  D + F  +     R+  
Sbjct: 393 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 452

Query: 557 SDKA 560
            D A
Sbjct: 453 LDDA 456



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 129/281 (45%), Gaps = 40/281 (14%)

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P + TYN L++C  +  + D      G L K G+ PD  SY ++I G    G++ KA   
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 212

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
            L M+E+ V+P+  I N II    +  ++  A SI   M+  G++ ++FT++ +I    +
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG------------------ASCNL------ 484
             ++  A  + ++M+  G  P+  TYN LI                   +SC +      
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 332

Query: 485 -----------GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN--MKEAEEVFAK 531
                      G  + A  ++D M+ +G  PDII+Y+ ++ G+    +  + +   +F  
Sbjct: 333 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 392

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           + T G+A +   F IL   Y R    DKA  I +   ++NK
Sbjct: 393 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED--MQNK 431


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 216/445 (48%), Gaps = 5/445 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKM--IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           V++     G +  AL + R+M   +    PD  ++N ++  L + G    A  V  EM +
Sbjct: 163 VVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVD 222

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
           M   PN  TYN  I G+ +  +L+    L   M ++G +PN VT+N+L+  LC+ G + +
Sbjct: 223 MGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDE 282

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
               + E+ +        D  T +IL D   + G+    L+L+ +  +K +       ++
Sbjct: 283 TRVLMDEMASH---SMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSI 339

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L+NG C +G ++ A      ++  G +P  + YNTL+N  C+   L  A   +  +    
Sbjct: 340 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD I+Y  +I GLC    + KA + ++ M +  V P    +N +ID YG  G L   F
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 459

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           ++   M   G+ S+V +F +++ A  + G I +A ++  +M+   + P+   YN +I A 
Sbjct: 460 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
              G    A  L ++M   G++  I+TY  L+KG C    + EAEE+   ++  GL  D 
Sbjct: 520 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 579

Query: 542 IPFRILKKRYRRMKESDKARDIHQK 566
           + +  +        ++DKA ++ Q+
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQE 604



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 217/436 (49%), Gaps = 3/436 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           GG +     LR +M+  G  P+++T+N L++ LC+ G +++   ++ EM+     P+  T
Sbjct: 242 GGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFT 301

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y+    G  R  E    L LF+     G+     T +IL++ LCK G +  A + L E+L
Sbjct: 302 YSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVL-EML 360

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
               G   + VI +T L++ Y +  D   A  ++  M  ++I+ D + YN LING C   
Sbjct: 361 VHT-GLVPTTVIYNT-LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            ++ A     +M K G  P V T+NTL++     G+L++       + + G+  D IS+ 
Sbjct: 419 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 478

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           ++++  C +G I +A   L  M+ K V P   ++N IID Y   GD   AF + + M + 
Sbjct: 479 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNS 538

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GVS+++ T+N L+    R   I +A  L   +   G+ PDV +YN +I A CN G    A
Sbjct: 539 GVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKA 598

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L+L  EM + GI P + TY  L+    + G + + E ++ ++    +      + I+   
Sbjct: 599 LELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 658

Query: 551 YRRMKESDKARDIHQK 566
           Y R +   K   + ++
Sbjct: 659 YVRCENDSKVASLKKE 674



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 179/374 (47%), Gaps = 3/374 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+  T L L  + ++KG +    T + L+N LCK G + KA+ V+  +      P    Y
Sbjct: 313 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 372

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYC+V +L  A  +F  M +  IRP+ +T+N L++ LCK  ++  A   + E+  
Sbjct: 373 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM-- 430

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            +       V T   L+D+Y   G   +   + +DM QK I++D++++  ++  FC NG 
Sbjct: 431 -EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I  A A    M+ +   P+   YN++++   + G  ++A      +  +GV+   ++Y  
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNL 549

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +++GLC    I +A E + ++  + + P+   +N II      GD   A  +   M  +G
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +   + T++ L+ A    G + D   L ++ML   + P    Y +++ A     +     
Sbjct: 610 IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVA 669

Query: 492 QLYDEMLRRGITPD 505
            L  EM  +GI  D
Sbjct: 670 SLKKEMSEKGIAFD 683



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 140/338 (41%), Gaps = 46/338 (13%)

Query: 104 MRDTGPVRCTLETDYRRHV--------AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           +RD     C  E    RH+        A+I  LC    +  A  L  +M + G  P V T
Sbjct: 382 VRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVET 441

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
            N L++     G LEK   V+ +M +     +  ++ + +  +C+  ++ +A+ +   M 
Sbjct: 442 FNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI 501

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
              + PN   +N ++                                      D+Y ++G
Sbjct: 502 YKDVAPNAQVYNSII--------------------------------------DAYIESG 523

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
           D  QA  L   M    +   IV YN+L+ G C +  I  A      +  +G  PDV++YN
Sbjct: 524 DTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYN 583

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           T+++  C +G  D+A      ++K G+ P   +Y T++  L   G +         ML K
Sbjct: 584 TIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHK 643

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
           +V P   I+ +++D Y RC + S   S++  M   G++
Sbjct: 644 NVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIA 681



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 118/259 (45%), Gaps = 2/259 (0%)

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N+L+      G  +   A F  ++  G  PD   +N ++      G LD A      + +
Sbjct: 126 NLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGR 185

Query: 360 TGVA--PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
           +  A  PD  SY  +I GL   G    A +    M++  VVP    +N +IDG+ + GDL
Sbjct: 186 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDL 245

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
              F +RD ML  G   N+ T+N L+    R G + +   L  EM    +FPD FTY++L
Sbjct: 246 EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSIL 305

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
                  G     L L+ E L++G+     T + L+ G C  G + +AE+V   +   GL
Sbjct: 306 FDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 365

Query: 538 AIDHIPFRILKKRYRRMKE 556
               + +  L   Y ++++
Sbjct: 366 VPTTVIYNTLINGYCQVRD 384



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 2/206 (0%)

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           LP + + N LL  L   G+  +    +G+L   G  PD  ++  ++Q     GD+  A  
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 388 FLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            +  M      P P    +NV+I G  R G  S+A  + D M+  GV  N  T+N +I  
Sbjct: 179 MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             +GG +   F L+ +ML DG  P++ TYN+L+   C  G +     L DEM    + PD
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298

Query: 506 IITYTELIKGHCARGNMKEAEEVFAK 531
             TY+ L  G    G  +    +FA+
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAE 324


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 210/396 (53%), Gaps = 4/396 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A  L  +M+  G  PD++  N L++ LC+ G +++++ ++ ++ +   SPN  T N FI 
Sbjct: 200 AHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQ 259

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G+C+   L++A+ L   +   G+ P+ +T+N L+  LCK   + +A  +L +++ +    
Sbjct: 260 GFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEG--- 315

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D  T   ++D Y K G    A  +  D   K    D   Y  LING C +GDI  A 
Sbjct: 316 YEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAI 375

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F + +++G  P+++  NTL+  L +QG + +A      +S+ G +PD  +Y  +I GL
Sbjct: 376 NVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGL 435

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G +  A   ++  + K  +P+   +N +IDGY +   L NA  I D M + GVS +V
Sbjct: 436 CKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDV 495

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+N+++    + G   D     K M+  G  P++ TYN+L  + C    +  AL L +E
Sbjct: 496 ITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEE 555

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           M  +G+TPD++ +  L+KG C  G++  A ++F ++
Sbjct: 556 MQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRV 591



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 208/430 (48%), Gaps = 6/430 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M  KG VPDV T    +   C+      A  ++  M       +   Y   I G+   N
Sbjct: 136 RMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEEN 195

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
              +A  LF  M   GI P+ +  N L+H LC+KG + ++ + L +VL       + ++ 
Sbjct: 196 HRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRG---VSPNLF 252

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T  I +  + +     +A+ L  D   + +  D++ YN LI G C N  +  A  Y  +M
Sbjct: 253 TVNIFIQGFCQRAMLNEAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKM 311

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           +  G+ PD  TYN++++  CK G +  A       +  G  PD+ +Y ++I GLC  GDI
Sbjct: 312 VNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDI 371

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A       +EK + P   + N ++ G  + G +  A  + + M   G S +++T+N +
Sbjct: 372 DRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLV 431

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    + G + DA +L  + +  G  PDVFT+N LI   C    +  A+++ D M   G+
Sbjct: 432 INGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGV 491

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
           +PD+ITY  ++ G C  G  ++    F  +   G   + I + IL + + + ++ ++A +
Sbjct: 492 SPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALN 551

Query: 563 IHQKWLLRNK 572
           + ++  ++NK
Sbjct: 552 LIEE--MQNK 559



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 195/379 (51%), Gaps = 4/379 (1%)

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           + +G  PDV+T+N L+  LCK   + +A+H +R+M      P+  TYN+ I GYC++  +
Sbjct: 277 VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMM 336

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
             A  +    A  G  P+  T+  L++ LC+ G +  A+    E +  + G   + V+ +
Sbjct: 337 QNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAM--EKGLKPNLVLCN 394

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T L+    + G   QAL L N+M +     DI  YN++ING C  G +S A       + 
Sbjct: 395 T-LVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIA 453

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           +G LPDV T+NTL++  CK+ KLD A      +   GV+PD I+Y +I+ GLC  G    
Sbjct: 454 KGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYED 513

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
                  M+EK  VP    +N++ + + +   +  A ++ + M + G++ +V  F  L+ 
Sbjct: 514 VMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMK 573

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFP-DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                G +  A+ L K +     F   + TYN++I A     ++++A +L+++M   G +
Sbjct: 574 GFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFS 633

Query: 504 PDIITYTELIKGHCARGNM 522
           PD  TY  +I G C  GN+
Sbjct: 634 PDSYTYRVMIDGFCKTGNI 652



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 207/413 (50%), Gaps = 4/413 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I  LC   K+  A    RKM+ +G  PD  T+N +++  CK+G ++ AD
Sbjct: 281 LTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNAD 340

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++R+ +     P+ +TY + I G C+  ++D+A+++F+     G++PN V  N LV  L
Sbjct: 341 QILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGL 400

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            ++GL+  A+K + E+    +   + D+ T  ++++   K G    A  L  D   K   
Sbjct: 401 SQQGLILQALKLMNEM---SENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHL 457

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+  +N LI+G+C    + +A     +M   G  PDVITYN++LN LCK GK ++    
Sbjct: 458 PDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGT 517

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           + ++ + G  P+ I+Y  + +  C    + +A   +  M  K + P+   +  ++ G+  
Sbjct: 518 FKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCD 577

Query: 414 CGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
            GDL  A+ + + +   +  S  + T+N +I A     ++  A  L  +M  +G  PD +
Sbjct: 578 NGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSY 637

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           TY ++I   C  G+I+         + +G+ P + T+  ++   C +  + EA
Sbjct: 638 TYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEA 690



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 142/304 (46%), Gaps = 6/304 (1%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           L  LK M +     C+   D   +  VI  LC  G +  A  L    I KG +PDV T N
Sbjct: 407 LQALKLMNEMSENGCS--PDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFN 464

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            L++  CK   L+ A  ++  M     SP+  TYN+ + G C+  + +  +  F  M   
Sbjct: 465 TLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEK 524

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G  PN +T+NIL  + CK   + +A+  + E+    +   T DV+    LM  +  NGD 
Sbjct: 525 GCVPNIITYNILTESFCKARKVEEALNLIEEM---QNKGLTPDVVNFGTLMKGFCDNGDL 581

Query: 278 FQALALWNDM-FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             A  L+  +  Q      I  YN++IN F    +++ A   F +M + GF PD  TY  
Sbjct: 582 DGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRV 641

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           +++  CK G ++    F  V  + G+ P   ++  ++  LC+   + +A   +  M+ K 
Sbjct: 642 MIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKG 701

Query: 397 VVPE 400
           +VPE
Sbjct: 702 IVPE 705



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 124/246 (50%), Gaps = 2/246 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C   K+  A+ +  +M   G  PDV+T+N ++N LCK G  E      + M E 
Sbjct: 465 TLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEK 524

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN     +C+  ++++AL+L   M N G+ P+ V    L+   C  G L  A
Sbjct: 525 GCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGA 584

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +    V  D+  K +  + T  I+++++    +   A  L+N M +     D   Y V+
Sbjct: 585 YQLFKRV--DEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVM 642

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC  G+I+S +++    +++G +P + T+  +LNCLC + ++ EA     ++   G+
Sbjct: 643 IDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGI 702

Query: 363 APDQIS 368
            P+ ++
Sbjct: 703 VPEVVN 708



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 161/387 (41%), Gaps = 42/387 (10%)

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC--ATYNAFITGYCRVNELDKALHL 210
           +LT+  ++ +L   G+ E  + V+ E + M          Y   +  Y R  ++ +A+ +
Sbjct: 40  LLTYKGMIEKLGFHGEFEAMEEVLAE-TRMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDV 98

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M      P+  ++N +++ L +      A K     +   D     DV T TI M S
Sbjct: 99  FERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVY---MRMRDKGIVPDVYTFTIRMKS 155

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + +      A  L N+M  +  ++  VAY  +I GF        A   F +ML       
Sbjct: 156 FCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLG------ 209

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
                                         G+ PD +++  +I  LC  G + ++   L 
Sbjct: 210 -----------------------------LGICPDIMAFNKLIHTLCRKGHVQESERLLN 240

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            +L++ V P     N+ I G+ +   L+ A  + D  +  G++ +V T+N LI    +  
Sbjct: 241 KVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLD-GVGRGLTPDVITYNTLICGLCKNF 299

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A    ++M+ +G  PD FTYN +I   C LG +  A Q+  +   +G  PD  TY 
Sbjct: 300 KVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYC 359

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGL 537
            LI G C  G++  A  VF +    GL
Sbjct: 360 SLINGLCQDGDIDRAINVFNEAMEKGL 386



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 1/254 (0%)

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G I  A   F +M      P V +YN ++N L +    D+A   Y  +   G+ PD  ++
Sbjct: 90  GKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTF 149

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
              ++  C       AR  L +M  +        +  +I G+        A  + + ML 
Sbjct: 150 TIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLG 209

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+  ++  FN LI    R G + ++  L  ++L  G+ P++FT N+ I   C    ++ 
Sbjct: 210 LGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNE 269

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A++L D  + RG+TPD+ITY  LI G C    + EAE    K+   G   D   +  +  
Sbjct: 270 AIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIID 328

Query: 550 RYRRMKESDKARDI 563
            Y ++     A  I
Sbjct: 329 GYCKLGMMQNADQI 342



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 21/229 (9%)

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG-- 410
           F  V  + G     ++YK +I+ L  HG+     E L            +I N +++G  
Sbjct: 27  FNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAE-------TRMNIDNGLLEGVY 79

Query: 411 ------YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL--ILAETRGGSIFD-AFSLKKE 461
                 YGR G +  A  + + M  F    +V ++NA+  IL E R    FD A  +   
Sbjct: 80  IGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYR---YFDQAHKVYMR 136

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           M   GI PDV+T+ + + + C     H A +L + M  +G     + Y  +I G     +
Sbjct: 137 MRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENH 196

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
             EA E+F ++  LG+  D + F  L     R     ++  +  K L R
Sbjct: 197 RVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKR 245


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 231/453 (50%), Gaps = 8/453 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I++LC   ++  A  + +KM+  G  PD+ T++ +++ LCK   ++KA+ V+ +M E 
Sbjct: 174 SIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEA 233

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN+ I GY      ++++ +F  M++ G+ P     N  +HAL K G   +A
Sbjct: 234 GTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEA 293

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA--LWNDMFQKNIQTDIVAYN 300
                 ++         D+I+ + ++  Y    D   A    ++N M  K I  +   +N
Sbjct: 294 KCIFDSMVLKG---PKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFN 350

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LIN +   G +  A   F  M  +G +PD +T+ T+++ LC+ G+LD+A H +  +   
Sbjct: 351 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 410

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLS 418
           GV P +  Y  +IQG C HG++VKA+E +  M+ K  +P P +  ++ II+   + G ++
Sbjct: 411 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-IPPPGVKYFSSIINNLCKEGRVA 469

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
               I D+M+  G   NV TFN+L+      G++ +AF+L   M   GI P+ + Y  L+
Sbjct: 470 EGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLV 529

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G I  AL ++ +ML +G+ P  + Y+ ++ G         A+++F ++   G  
Sbjct: 530 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTT 589

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           +    + ++     R   +D+A  + +K    N
Sbjct: 590 VSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 622



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 197/412 (47%), Gaps = 6/412 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD--LEKADHVIREMSEMRPSPNCA 189
           G+   A  +   M+ KG  PD+++++ +++      D  L    ++   M     +PN  
Sbjct: 288 GRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKH 347

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            +N  I  Y R   +DKA+ +F  M N G+ P+ VT   ++ +LC+ G L DA+     +
Sbjct: 348 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 407

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY-NVLINGFCL 308
           +  D G   S+ +    L+     +G+  +A  L ++M  K+I    V Y + +IN  C 
Sbjct: 408 V--DIGVPPSEAVYGC-LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCK 464

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G ++        M++ G  P+V+T+N+L+   C  G ++EA      ++  G+ P+   
Sbjct: 465 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 524

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y T++ G C +G I  A      ML K V P   ++++I+ G  +    + A  +   M+
Sbjct: 525 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 584

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G + ++ T+  ++    R     +A  L +++    +  D+ T+N++I A   +G   
Sbjct: 585 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 644

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            A +L+D +   G+ P+I TY+ +I       + +EA+ +F  ++  G A D
Sbjct: 645 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASD 696



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 173/403 (42%), Gaps = 40/403 (9%)

Query: 186 PNCATYNAFITGYCRVN----------------------------------ELDKALHLF 211
           P   TYN  I  Y RV+                                  E+DKA  LF
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKAHCLF 157

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M   G+ P  +  N ++  LCK   +  A   + +++   D     D+ T ++++D  
Sbjct: 158 LEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV---DSGIAPDLFTYSLIIDGL 214

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K+    +A  +   M +   + + + YN LI+G+ ++G  + +   F QM   G +P V
Sbjct: 215 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 274

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD--IVKAREFL 389
              N+ ++ L K G+ +EA   +  +   G  PD ISY T++ G     D  +       
Sbjct: 275 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIF 334

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             ML K + P  H++N++I+ Y RCG +  A  I + M + G+  +  TF  +I +  R 
Sbjct: 335 NLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRI 394

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + DA      M+  G+ P    Y  LI   CN G +  A +L  EM+ + I P  + Y
Sbjct: 395 GRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 454

Query: 510 -TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            + +I   C  G + E +++   +   G   + + F  L + Y
Sbjct: 455 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 497



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 147/299 (49%), Gaps = 3/299 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I +LC  G++     +   M+Q G  P+V+T N L+   C +G++E+A  ++  M+ +
Sbjct: 457 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 516

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PNC  Y   + GYC+   +D AL +F  M + G++P  V ++I++H L +      A
Sbjct: 517 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 576

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   E++   +   T  + T  +++    +N    +A  L   +F  N++ DI+ +N++
Sbjct: 577 KKMFHEMI---ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV 633

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+     G    A   F  +   G +P++ TY+ ++  L K+   +EA + +  + K+G 
Sbjct: 634 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 693

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           A D      I++ L    ++ KA  +L  + E ++  E    +++   + R G +   F
Sbjct: 694 ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIKGLF 752



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 144/304 (47%), Gaps = 11/304 (3%)

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T  IL+D Y +       LA+   + +  +  D  +Y+ LI GF  +G++  A   F +M
Sbjct: 102 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEM 160

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           +++G LP ++  N+++  LCK  ++D+A      +  +G+APD  +Y  II GLC    +
Sbjct: 161 MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAM 220

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA   L  M+E    P    +N +I GY   G  + +  +   M S GV   V   N+ 
Sbjct: 221 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 280

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA------SCNLGHIHLALQLYDE 496
           I A  + G   +A  +   M+L G  PD+ +Y+ ++        SC L  +H    +++ 
Sbjct: 281 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC-LADVH---NIFNL 336

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           ML +GI P+   +  LI  +   G M +A  +F  +Q  G+  D + F  +     R+  
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 396

Query: 557 SDKA 560
            D A
Sbjct: 397 LDDA 400



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 38/274 (13%)

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P + TYN L++C  +  + D      G L K G+ PD  SY ++I G    G++ KA   
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 156

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
            L M+E+ V+P+  I N II    +  ++  A SI   M+  G++ ++FT++ +I    +
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG------------------ASCNL------ 484
             ++  A  + ++M+  G  P+  TYN LI                   +SC +      
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 485 -----------GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN--MKEAEEVFAK 531
                      G  + A  ++D M+ +G  PDII+Y+ ++ G+    +  + +   +F  
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 336

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           + T G+A +   F IL   Y R    DKA  I +
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFE 370



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 1/100 (1%)

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P + TYN+LI     +    L L +   +L+ G+ PD  +Y+ LI G    G + +A  +
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 156

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           F ++   G+    +    + K   +MKE DKA  I QK +
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV 196


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 220/424 (51%), Gaps = 5/424 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M   G  P+V+T+N L++ LCK  + ++A  +   M  +  SP+  TYN  + G  R  +
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           L++A+ LF  M +     + ++ NILV  LC+ G +  A++F  ++    D + + +VIT
Sbjct: 61  LERAMALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKM----DDRCSPNVIT 115

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            ++L+D   K     QA+ L   M  +    D++ Y +L++G C    +++A+    +ML
Sbjct: 116 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 175

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G +P+++TYN+LL+ LC+  ++ +A      ++  G  P+ ++Y T+I GLC  G + 
Sbjct: 176 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 235

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A   L  M++K   P+  I+N++I+G  +   +  + ++    +S G+  +V T++++I
Sbjct: 236 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 295

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               R   + +A  L   +   G  PDV  Y+ LI   C  G +  A  LY+ M   G  
Sbjct: 296 YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCD 355

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            D++TY+ LI G C  G + EA  + A++  +G     + +  L K    +   D+A ++
Sbjct: 356 ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIEL 415

Query: 564 HQKW 567
            ++ 
Sbjct: 416 VEEM 419



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 205/420 (48%), Gaps = 41/420 (9%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A+ L ++M+ + +  DV++ N LV  LC+ G +E A    R+M + R SPN  TY
Sbjct: 59  GKLERAMALFQEMLDRRS-HDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITY 116

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  I G C+ N + +A+ L  +M   G  P+ +T+ ILV  LCK+  +  A + L E+L 
Sbjct: 117 SVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML- 175

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             D     +++T   L+    +      ALAL  DM  +    ++V Y  LI+G C  G 
Sbjct: 176 --DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 233

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A A    M+ +G  PD++ YN L+N LCK  ++DE+          G+ PD ++Y +
Sbjct: 234 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 293

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC    + +A   LL +  +   P+  +++ +IDG  + G +  AF + ++M   G
Sbjct: 294 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDG 353

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
             ++V T++ LI    + G + +A  L   M+  G  P   TYN LI   C+L H+  A+
Sbjct: 354 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAI 413

Query: 492 QLYDEMLRR------------------------------------GITPDIITYTELIKG 515
           +L +EM R                                     G+ PD ITY+ L++G
Sbjct: 414 ELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEG 473



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 234/498 (46%), Gaps = 52/498 (10%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MRD G      E +   + ++I  LC   +   A  L   M      P ++T+N L++ L
Sbjct: 1   MRDHG-----CEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGL 55

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
            + G LE+A  + +EM + R S +  ++N  +TG CR  +++ AL  F  M ++   PN 
Sbjct: 56  FRTGKLERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNV 113

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           +T+++L+  LCK   +  AV+ L  + A      + DVIT TIL+D   K      A  +
Sbjct: 114 ITYSVLIDGLCKANRVSQAVELLESMKAR---GCSPDVITYTILVDGLCKESKVAAAWEV 170

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
             +M       ++V YN L++G C    +S A A    M  RG  P+V+TY TL++ LCK
Sbjct: 171 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 230

Query: 344 QG--------------------------------KLDEASHFYGVLSKT---GVAPDQIS 368
            G                                K D+      +L +    G+ PD ++
Sbjct: 231 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 290

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y ++I GLC    + +A   LL +  +   P+  +++ +IDG  + G +  AF + ++M 
Sbjct: 291 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMT 350

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G  ++V T++ LI    + G + +A  L   M+  G  P   TYN LI   C+L H+ 
Sbjct: 351 GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 410

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE-EVFAKIQTLGLAIDHIPFRIL 547
            A++L +EM R    P  +TY  LI G C    +  A  + F ++   G+  DHI + IL
Sbjct: 411 EAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSIL 470

Query: 548 KKRYRRMKESDKARDIHQ 565
            +  +      K++D+H+
Sbjct: 471 LEGLK------KSKDLHE 482



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 145/296 (48%), Gaps = 6/296 (2%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D L  MRD     CT   +   +  +I  LC  G++  A  +   MI KG  PD++ +N 
Sbjct: 201 DALALMRDMTCRGCT--PNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNM 258

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           L+N LCK   ++++  ++R        P+  TY++ I G CR N LD+A  L   + + G
Sbjct: 259 LINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG 318

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
             P+ + ++ L+  LCK G + +A   L EV+  D   A  DV+T + L+D   K G   
Sbjct: 319 CPPDVILYSTLIDGLCKAGKVDEAFD-LYEVMTGDGCDA--DVVTYSTLIDGLCKAGRVD 375

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A  L   M +       + YN LI G C    +  A     +M +    P  +TYN L+
Sbjct: 376 EAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILI 435

Query: 339 NCLCKQGKLDEAS-HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           + +C+  ++D A+  ++  +   GV PD I+Y  +++GL    D+ + R  +L  +
Sbjct: 436 HGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQM 491


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 221/453 (48%), Gaps = 3/453 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V+  L  D   + ++I   C    +  A  +   M QKG   + +++  L++ LC+ G +
Sbjct: 221 VQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRI 280

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A  +  +M+E    P   TY   I          +AL+LF+ M   G  PN  T+ +L
Sbjct: 281 NEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVL 340

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LCK+  + +A K L E+    +      V+T   L+D Y K G    A  + + M  
Sbjct: 341 IDGLCKENKMDEARKMLSEM---SEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
            +   +   YN LI G C    +  A A   +ML+R   P +ITYN+L++  CK   L+ 
Sbjct: 398 NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLES 457

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A     ++++ G+ PDQ +Y   I  LC  G + +A     S+  K V     I+  +ID
Sbjct: 458 AYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALID 517

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           GY + G +  A+S+ + ML+     N +T+N LI    +   + +A SL  +ML  G+ P
Sbjct: 518 GYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKP 577

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            V TY +LIG     G    AL++++ M+  G  PD+ TYT  +  + ++G ++E ++V 
Sbjct: 578 TVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVI 637

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
           AK+   G+  D + + +L   Y R+  + +A D
Sbjct: 638 AKMNEEGILPDLVTYTVLIDGYARLGLTHRAFD 670



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 198/440 (45%), Gaps = 38/440 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  G+I  AL L   M +    P V T+  L+  L   G   +A ++  EM 
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TY   I G C+ N++D+A  + S M+  G+ P+ VT+N L+   CK+G++ 
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA + L  + ++  G  T    T   L+    K     +A+AL N M ++ +   ++ YN
Sbjct: 387 DAFEILDLMESNSCGPNTR---TYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYN 443

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G C   D+ SA+     M + G +PD  TY+  ++ LCK+G+++EA   +  +   
Sbjct: 444 SLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK 503

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GV  +++ Y  +I G C  G I  A   L  ML  + +P  + +NV+I+G  +   +  A
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL---------------- 464
            S+   ML+ GV   V T+  LI    + G+   A  +   M+                 
Sbjct: 564 SSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623

Query: 465 -------------------DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
                              +GI PD+ TY +LI     LG  H A      M+  G  P 
Sbjct: 624 YFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPS 683

Query: 506 IITYTELIKGHCARGNMKEA 525
           +   + LIK       MKE 
Sbjct: 684 LYIVSILIKNLSHENRMKET 703



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 193/413 (46%), Gaps = 6/413 (1%)

Query: 159 LVNELCKIGDLEKADHVIREMS---EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           ++   C I D+     V R+M+   E +  P    YN  +    +   +D+   ++  + 
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           NN I PN  T N +V+  CK G + +A  +  +++         D  T T L+  + +N 
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIV---QAGLHPDTFTYTSLILGHCRNK 243

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
               A  ++  M QK  Q + V+Y  LI+G C  G I+ A   F  M +    P V TY 
Sbjct: 244 GVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            L+  L   G+  EA + +  + + G  P+  +Y  +I GLC    + +AR+ L  M EK
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK 363

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
            ++P    +N +IDGY + G + +AF I DLM S     N  T+N LI    +   +  A
Sbjct: 364 GLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKA 423

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            +L  +ML   + P + TYN LI   C +  +  A +L   M   G+ PD  TY+  I  
Sbjct: 424 MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDT 483

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            C  G ++EA  +F  ++  G+  + + +  L   Y ++ + D A  + ++ L
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 229/540 (42%), Gaps = 96/540 (17%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E L+    M++ G      E +   +  +I  LC   K+  A  +  +M +KG +P V+T
Sbjct: 317 EALNLFNEMKEKG-----CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVT 371

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +N L++  CK G ++ A  ++  M      PN  TYN  I G C+  ++ KA+ L + M 
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
              + P+ +T+N L+H  CK   L  A + L   L +++G    D  T ++ +D+  K G
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLS--LMNENG-LVPDQWTYSVFIDTLCKEG 488

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
              +A  L++ +  K ++ + V Y  LI+G+C  G I  A++   +ML    LP+  TYN
Sbjct: 489 RVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYN 548

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG--------------- 380
            L+  LCK+ K+ EAS     +   GV P  ++Y  +I  +   G               
Sbjct: 549 VLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSL 608

Query: 381 ----DIVKAREFL----------------LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
               D+     FL                  M E+ ++P+   + V+IDGY R G    A
Sbjct: 609 GYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRA 668

Query: 421 FSIRDLMLSFGVSSNVFTFNALI--------LAETRGGSIFDAFS--LKKEMLLD----- 465
           F     M+  G   +++  + LI        + ETR     D+ S  L+ E+ L      
Sbjct: 669 FDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKM 728

Query: 466 --------------------------------------GIFPDVFTYNLLIGASCNLGHI 487
                                                 G+ P    YN L+   C LG  
Sbjct: 729 VEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVY 788

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A++L D M+  G+ P + +Y  L+ G    G+ ++A+ VF  + + G   D + +++L
Sbjct: 789 AEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVL 848



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 191/410 (46%), Gaps = 41/410 (10%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P++ T N +VN  CKIG++ +A+    ++ +    P+  TY + I G+CR   +D A  +
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEV 251

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M   G + N V++  L+H LC+ G + +A+K                          
Sbjct: 252 FLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALK-------------------------- 285

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                       L+ DM + N    +  Y VLI     +G    A   F +M ++G  P+
Sbjct: 286 ------------LFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN 333

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V TY  L++ LCK+ K+DEA      +S+ G+ P  ++Y  +I G C  G I  A E L 
Sbjct: 334 VHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD 393

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M   S  P    +N +I G  +   +  A ++ + ML   +S ++ T+N+LI  + +  
Sbjct: 394 LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVN 453

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +  A+ L   M  +G+ PD +TY++ I   C  G +  A  L+D +  +G+  + + YT
Sbjct: 454 DLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYT 513

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKES 557
            LI G+C  G +  A  +  ++       +   + +L +   + ++MKE+
Sbjct: 514 ALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 114/488 (23%), Positives = 203/488 (41%), Gaps = 56/488 (11%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R +  +I  LC   K+  A+ L  KM+++   P ++T+N L++  CK+ DLE A  ++  
Sbjct: 405 RTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSL 464

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M+E    P+  TY+ FI   C+   +++A  LF ++   G++ N V +  L+   CK G 
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           +  A   L  +L D       +  T  +L++   K     +A +L   M    ++  +V 
Sbjct: 525 IDVAYSLLERMLND---ACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVT 581

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y +LI     +G    A   F  M+  G+ PDV TY   L+    QG L+E       ++
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMN 641

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII---------- 408
           + G+ PD ++Y  +I G    G   +A +FL  M++    P  +I +++I          
Sbjct: 642 EEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMK 701

Query: 409 --------DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--------LAETRG--- 449
                   D      +   A  + + M+  G + +V  + ALI        L E +G   
Sbjct: 702 ETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVH 761

Query: 450 ------------------------GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
                                   G   +A  L   M+ +G+ P + +Y LL+      G
Sbjct: 762 HMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEG 821

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
               A  ++  +L  G   D + +  LI G   R  + E  E+   ++  G   + + + 
Sbjct: 822 SNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYS 881

Query: 546 ILKKRYRR 553
           +L +   R
Sbjct: 882 LLIEGLER 889


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 229/457 (50%), Gaps = 33/457 (7%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T + L R++  K   PD  T N L+N  C +G +  A  V+ ++ +    P+  T    I
Sbjct: 81  TVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLI 140

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   ++ KALH    +   G R ++V++  L++ +CK G    A++ L  +    DG
Sbjct: 141 KGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRI----DG 196

Query: 256 KATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           + T  +V+    ++D   K     +A  L+++M  K I  ++V Y+ +I+GFC+ G ++ 
Sbjct: 197 RLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTE 256

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A  +  +M+ +   PDV  YNTL++ L K+GK+ EA +   V+ KT + P+ I+Y T+I 
Sbjct: 257 ALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLID 316

Query: 375 G---------------------------LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           G                           LC    + +A      M +K++VP    +N +
Sbjct: 317 GYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSL 376

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           IDG  + G +S A+ + D M   G  +NV T+N+LI    + G +  A +L  +M   GI
Sbjct: 377 IDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGI 436

Query: 468 FPDVFTYNLLI-GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
            PD++T N+L+ G  C    +  A  L+ ++L +G  P++ TY  +I GHC  G + EA 
Sbjct: 437 QPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAY 496

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            + +K++  G + + I F+I+        E+DKA  +
Sbjct: 497 ALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKL 533



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 212/416 (50%), Gaps = 12/416 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I+ LCL G++  AL    K++ +G   D +++  L+N +CKIG+   A  ++R +   
Sbjct: 138 TLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGR 197

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   YN  I   C+   + +A +LFS M+  GI  N VT++ ++H  C  G L +A
Sbjct: 198 LTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEA 257

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           + FL E++         DV     L+D+  K G   +A  +   + +  ++ +++ YN L
Sbjct: 258 LGFLNEMVLK---AINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTL 314

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G+        A   F  +   G  PDV +YN ++N LCK  +++EA + Y  + +  +
Sbjct: 315 IDGY--------AKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNM 366

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ ++Y ++I GLC  G I  A + +  M ++        +N +I+G  + G L  A +
Sbjct: 367 VPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIA 426

Query: 423 IRDLMLSFGVSSNVFTFNALILA-ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           + + M   G+  +++T N L+     +G  + +A  L +++L  G  P+V+TYN++I   
Sbjct: 427 LINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGH 486

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           C  G +  A  L  +M   G +P+ IT+  +I     +G   +AE++  ++   GL
Sbjct: 487 CKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 188/379 (49%), Gaps = 11/379 (2%)

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
           MR +P    +N  +  + ++      + L   +    I+P+  T NIL++  C  G +  
Sbjct: 57  MRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINL 116

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A   L ++L         D +T T L+      G   +AL   + +  +  + D V+Y  
Sbjct: 117 AFSVLSKIL---KWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGT 173

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LING C  G+  +A     ++  R   P+V+ YNT+++CLCK+  + EA + +  +S  G
Sbjct: 174 LINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKG 233

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           ++ + ++Y  II G CI G + +A  FL  M+ K++ P+ +I+N ++D   + G +  A 
Sbjct: 234 ISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAK 293

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           ++  +++   +  NV T+N LI  +     +F+A  L       G+ PDV++YN++I   
Sbjct: 294 NVLAVIVKTCLKPNVITYNTLI--DGYAKHVFNAVGLM------GVTPDVWSYNIMINRL 345

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C +  +  AL LY EM ++ + P+ +TY  LI G C  G +  A ++  ++   G   + 
Sbjct: 346 CKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANV 405

Query: 542 IPFRILKKRYRRMKESDKA 560
           I +  L     +  + DKA
Sbjct: 406 ITYNSLINGLCKNGQLDKA 424



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 165/320 (51%), Gaps = 12/320 (3%)

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           + T  +I    ++DS+ K       ++L   +  K IQ D    N+LIN FC  G I+ A
Sbjct: 58  RHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLA 117

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           F+   ++LK G+ PD +T  TL+  LC +G++ +A HF+  L   G   DQ+SY T+I G
Sbjct: 118 FSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLING 177

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           +C  G+   A + L  +  +   P   ++N IID   +   +S A ++   M   G+S+N
Sbjct: 178 VCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISAN 237

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           V T++A+I      G + +A     EM+L  I PDV+ YN L+ A    G +  A  +  
Sbjct: 238 VVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLA 297

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
            +++  + P++ITY  LI G+        A+ VF  +  +G+  D   + I+  R  ++K
Sbjct: 298 VIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVTPDVWSYNIMINRLCKIK 349

Query: 556 ESDKA----RDIHQKWLLRN 571
             ++A    +++HQK ++ N
Sbjct: 350 RVEEALNLYKEMHQKNMVPN 369



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 152/304 (50%), Gaps = 31/304 (10%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C+ GK+  AL    +M+ K   PDV  +N LV+ L K G +++A +V+  + + 
Sbjct: 243 AIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKT 302

Query: 183 RPSPNCATYNAFITGY---------------------------CRVNELDKALHLFSTMA 215
              PN  TYN  I GY                           C++  +++AL+L+  M 
Sbjct: 303 CLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMH 362

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
              + PN VT+N L+  LCK G +  A   + E+    D    ++VIT   L++   KNG
Sbjct: 363 QKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEM---HDRGHHANVITYNSLINGLCKNG 419

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGF-CLNGDISSAFAYFCQMLKRGFLPDVITY 334
              +A+AL N M  + IQ D+   N+L++G  C    + +A   F  +L +G+ P+V TY
Sbjct: 420 QLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTY 479

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N ++   CK+G LDEA      +  +G +P+ I++K II  L   G+  KA + L  M+ 
Sbjct: 480 NIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIA 539

Query: 395 KSVV 398
           + ++
Sbjct: 540 RGLL 543


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 220/463 (47%), Gaps = 28/463 (6%)

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           R LC  G+ G AL L R M + G VPD + +  +++ L   G + +A  ++ EM  M  +
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
            +  T+N  + G C +  + +A  L   M   G  P+ VT+  L+  LC+     +A   
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304

Query: 246 LGEVLADD-------------DGK---------------ATSDVITSTILMDSYFKNGDK 277
           LG +   +             +GK                  DV T +ILM    K G  
Sbjct: 305 LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRF 364

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             A+ + ++M +K    +IV Y+ L++ FC NG    A A   QML +GF  +   YN +
Sbjct: 365 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGI 424

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +  LCK GKLD+A+     +   G  PD  +Y T+I  LC +  + +A     +++E+ V
Sbjct: 425 IYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGV 484

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           V     +N +I    R G       +   ML  G   +V ++N LI A  + G++  + +
Sbjct: 485 VANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMA 544

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L +EM+  GI P+ F+YN+LI   C  G +  AL+L  EML +G+TPDI+TY  LI G C
Sbjct: 545 LLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLC 604

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
             G    A  +  K+    +  D + + IL   + +++  D A
Sbjct: 605 KVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDA 647



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 201/426 (47%), Gaps = 42/426 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  G++  A  L  +M+ +G +P V+T+ +L+  LC+     +AD     +  + 
Sbjct: 253 LVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRT---RQADEACAMLGRL- 308

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P  N    N  I G     +L +A  L+  M + G  P+  T++IL+H LCK G  G AV
Sbjct: 309 PEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAV 368

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E+   ++     +++T + L+ S+ +NG    A A+ + M  K    +   YN +I
Sbjct: 369 RMLDEM---EEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGII 425

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
              C +G +  A     +M  +G  PD+ TYNT++  LC    ++EA H +  L + GV 
Sbjct: 426 YALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVV 485

Query: 364 P-----------------------------------DQISYKTIIQGLCIHGDIVKAREF 388
                                               D ISY  +I+ LC  G++ ++   
Sbjct: 486 ANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMAL 545

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  M+ K + P    +N++I+   + G + +A  +   ML+ G++ ++ T+N LI    +
Sbjct: 546 LEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCK 605

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G    A +L +++  + + PD+ TYN+LI   C +  +  A  L D+ +  GI P+  T
Sbjct: 606 VGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERT 665

Query: 509 YTELIK 514
           +  +++
Sbjct: 666 WGMMVQ 671



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 167/327 (51%), Gaps = 3/327 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++  LC  G+ G+A+ +  +M +KG  P+++T++ L++  C+ G  + A  ++
Sbjct: 347 DVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAML 406

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M     S N   YN  I   C+  +LD+A  L   M + G +P+  T+N +++ LC  
Sbjct: 407 DQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNN 466

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
            L+ +A      ++ +      ++ IT   L+ +  +NG   + L L ++M     Q D+
Sbjct: 467 DLMEEAEHIFRNLIEEG---VVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDV 523

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           ++YN LI   C  G++  + A   +M+ +G  P+  +YN L+N LCK GK+ +A      
Sbjct: 524 ISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKE 583

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G+ PD ++Y T+I GLC  G    A   L  +  ++V P+   +N++I  + +   
Sbjct: 584 MLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRL 643

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALI 443
           L +A  + D  +S G+  N  T+  ++
Sbjct: 644 LDDAAMLLDKAISGGIVPNERTWGMMV 670



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 186/427 (43%), Gaps = 8/427 (1%)

Query: 135 GTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           G AL L  +M ++  V P   ++N +++ L +      A  + R M   R  P   T+  
Sbjct: 123 GRALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGV 182

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
                CR+     AL L   MA +G  P+ V +  ++HAL  +G + +A   L E+L   
Sbjct: 183 AARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMG 242

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
                +DV T   L+      G   +A  L + M  +     +V Y  L+ G C      
Sbjct: 243 ---CAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQAD 299

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A    C ML R    +V+  NT++     +GKL  A+  Y ++   G  PD  +Y  ++
Sbjct: 300 EA----CAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILM 355

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            GLC  G    A   L  M EK   P    ++ ++  + R G   +A ++ D ML+ G S
Sbjct: 356 HGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFS 415

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            N   +N +I A  + G +  A  L +EM   G  PD+ TYN +I   CN   +  A  +
Sbjct: 416 MNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHI 475

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           +  ++  G+  + ITY  LI      G  +E   + +++   G  +D I +  L K   +
Sbjct: 476 FRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCK 535

Query: 554 MKESDKA 560
               D++
Sbjct: 536 EGNVDRS 542



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 3/290 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C  G    A  +  +M+ KG   +   +N ++  LCK G L++A  +++EM    
Sbjct: 389 LLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQG 448

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYN  I   C  + +++A H+F  +   G+  N +T+N L+HAL + G   + +
Sbjct: 449 CKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGL 508

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+L         DVI+   L+ +  K G+  +++AL  +M  K I+ +  +YN+LI
Sbjct: 509 RLASEMLLHG---CQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLI 565

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           N  C  G +  A     +ML +G  PD++TYNTL+N LCK G    A +    L    V 
Sbjct: 566 NELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVH 625

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           PD ++Y  +I   C    +  A   L   +   +VP    W +++  + R
Sbjct: 626 PDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVR 675



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 38/257 (14%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC  GK+  A  L ++M  +G  PD+ T+N ++  LC    +E+A+H+ R + E 
Sbjct: 423 GIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEE 482

Query: 183 RPSPNCATYN-----------------------------------AFITGYCRVNELDKA 207
               N  TYN                                     I   C+   +D++
Sbjct: 483 GVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRS 542

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + L   M   GI+PN  ++N+L++ LCK G + DA++   E+L   +   T D++T   L
Sbjct: 543 MALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML---NQGLTPDIVTYNTL 599

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           ++   K G    AL L   +  +N+  DIV YN+LI+  C    +  A     + +  G 
Sbjct: 600 INGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGI 659

Query: 328 LPDVITYNTLLNCLCKQ 344
           +P+  T+  ++    +Q
Sbjct: 660 VPNERTWGMMVQNFVRQ 676



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 74/137 (54%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   +  +I+ LC  G +  ++ L  +M+ KG  P+  ++N L+NELCK G +  A  
Sbjct: 520 QLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALE 579

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           + +EM     +P+  TYN  I G C+V     AL+L   + N  + P+ VT+NIL+   C
Sbjct: 580 LSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHC 639

Query: 235 KKGLLGDAVKFLGEVLA 251
           K  LL DA   L + ++
Sbjct: 640 KVRLLDDAAMLLDKAIS 656


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 218/476 (45%), Gaps = 38/476 (7%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
            C  GK+ TAL    +MI  G  P V  +N L+N  CK GD+  A+ ++ EM   +  P 
Sbjct: 412 FCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPT 471

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY + + GYC   +++KAL L+  M   GI P+  T   L+  L + GL+ DAVK   
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFT 531

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E+    +     + +T  ++++ Y + G+  +A    N+M +K I  D  +Y  LI+G C
Sbjct: 532 EMA---EWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLC 588

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
           L G  S A  +   + K     + I Y  LL+  C++GKL+EA      +   GV  D +
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLV 648

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            Y  +I G   H D       L  M ++ + P+  I+  +ID   + GD   AF I DLM
Sbjct: 649 CYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM------------------------- 462
           ++ G   N  T+ A+I    + G + +A  L  +M                         
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGD 768

Query: 463 ----------LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
                     +L G+  +  TYN+LI   C  G +  A +L   M+  G++PD ITYT +
Sbjct: 769 MKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTM 828

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           I   C R ++K+A E++  +   G+  D + +  L        E  KA ++  + L
Sbjct: 829 ISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 201/425 (47%), Gaps = 5/425 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE     + +++   C  GKI  AL L  +M  KG VP + T   L++ L + G +  A 
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM+E    PN  TYN  I GYC    + KA    + M   GI P+  ++  L+H L
Sbjct: 528 KLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGL 587

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C  G   +A  F+  +     G    + I  T L+  + + G   +AL++  DM  + + 
Sbjct: 588 CLTGQASEAKVFVDGL---HKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVD 644

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+V Y VLI+G   + D         +M  RG  PD + Y ++++   K G   EA   
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           + ++   G  P++++Y  +I GLC  G + +A      M   + VP    +   +D   +
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTK 764

Query: 414 -CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
             GD+  A  + + +L  G+ +N  T+N LI    R G + +A  L   M+ DG+ PD  
Sbjct: 765 GVGDMKKAVELHNAILK-GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCI 823

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY  +I   C    +  A++L++ M  +GI PD + Y  LI G C  G M +A E+  ++
Sbjct: 824 TYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883

Query: 533 QTLGL 537
              GL
Sbjct: 884 LRQGL 888



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 211/438 (48%), Gaps = 38/438 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI---------------- 166
            +I  LC   K+  A+ +++ +  K   PDV+T+  LV  LCK+                
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRL 326

Query: 167 -------------------GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
                              G +E+A ++++ ++E   SPN   YNA I   C+    D+A
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEA 386

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             LF  M   G+ PN VT++IL+   C++G L  A+ FLGE++   D      V     L
Sbjct: 387 ELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMI---DMGLKPSVYPYNSL 443

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           ++ + K GD   A +L  +M  K ++  +V Y  L+ G+C  G I+ A   + +M  +G 
Sbjct: 444 INGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +P + T+ TLL+ L + G + +A   +  +++  V P++++Y  +I+G C  G++ KA E
Sbjct: 504 VPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFE 563

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
           FL  M+EK +VP+ + +  +I G    G  S A    D +       N   +  L+    
Sbjct: 564 FLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           R G + +A S+ ++M L G+  D+  Y +LI  S       + L L  EM  RG+ PD +
Sbjct: 624 REGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDV 683

Query: 508 TYTELIKGHCARGNMKEA 525
            YT +I      G+ KEA
Sbjct: 684 IYTSMIDAKSKTGDFKEA 701



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 215/460 (46%), Gaps = 3/460 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           + +L  + R   A++  L      G A+ L   MI  G  PDV  +  ++  LC++ DL 
Sbjct: 185 KVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLS 244

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  +I +M       N   YN  I G C+  ++ +A+ +   +A   ++P+ VT+  LV
Sbjct: 245 RAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLV 304

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LCK       ++ + E+L      + + V +   L++   K G   +AL L   + + 
Sbjct: 305 CGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSS---LVEGLRKRGKVEEALNLVKRVAEF 361

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            +  +I  YN LI+  C   +   A   F +M K G  P+ +TY+ L++  C++GKLD A
Sbjct: 362 GVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTA 421

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
             F G +   G+ P    Y ++I G C  GDI  A   +  M+ K + P    +  ++ G
Sbjct: 422 LSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGG 481

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           Y   G ++ A  +   M   G+  +++TF  L+    R G I DA  L  EM    + P+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPN 541

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             TYN++I   C  G++  A +  +EM+ +GI PD  +Y  LI G C  G   EA+    
Sbjct: 542 RVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            +      ++ I +  L   + R  + ++A  + Q   LR
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLR 641



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 199/434 (45%), Gaps = 3/434 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   +  VIR LC    +  A  +  +M   G   +++ +N L++ LCK   + +A 
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + ++++     P+  TY   + G C+V E +  L +   M      P+    + LV  L
Sbjct: 283 GIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGL 342

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K+G + +A+  +  V    +   + ++     L+DS  K  +  +A  L++ M +  + 
Sbjct: 343 RKRGKVEEALNLVKRVA---EFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLC 399

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            + V Y++LI+ FC  G + +A ++  +M+  G  P V  YN+L+N  CK G +  A   
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESL 459

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +    + P  ++Y +++ G C  G I KA      M  K +VP  + +  ++ G  R
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFR 519

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G + +A  +   M  + V  N  T+N +I      G++  AF    EM+  GI PD ++
Sbjct: 520 AGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYS 579

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  LI   C  G    A    D + +     + I YT L+ G C  G ++EA  V   + 
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMG 639

Query: 534 TLGLAIDHIPFRIL 547
             G+ +D + + +L
Sbjct: 640 LRGVDLDLVCYGVL 653



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 191/412 (46%), Gaps = 5/412 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            L  +  M +   +P+V T + L++ L K      A  +  +M  +   P+   Y   I 
Sbjct: 176 VLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIR 235

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
             C + +L +A  +   M   G   N V +N+L+  LCKK  + +AV     +  D  GK
Sbjct: 236 SLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVG----IKKDLAGK 291

Query: 257 A-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               DV+T   L+    K  +    L + ++M +        A + L+ G    G +  A
Sbjct: 292 ELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEA 351

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                ++ + G  P++  YN L++ LCK    DEA   +  + K G+ P+ ++Y  +I  
Sbjct: 352 LNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDM 411

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C  G +  A  FL  M++  + P  + +N +I+G+ + GD+S A S+   M++  +   
Sbjct: 412 FCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPT 471

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           V T+ +L+      G I  A  L  EM   GI P ++T+  L+      G I  A++L+ 
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFT 531

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           EM    + P+ +TY  +I+G+C  GNM +A E   ++   G+  D   +R L
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPL 583



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 141/282 (50%), Gaps = 9/282 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++   C  GK+  AL + + M  +G   D++ +  L++   K  D +    +++EM 
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMH 674

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    P+   Y + I    +  +  +A  ++  M N G  PN VT+  +++ LCK G + 
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734

Query: 241 DAVKFLGEVLADD--DGKATSDVITSTILMDSYFKN-GDKFQALALWNDMFQKNIQTDIV 297
           +A     E+L      G +  + +T    +D   K  GD  +A+ L N +  K +  +  
Sbjct: 735 EA-----EILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAIL-KGLLANTA 788

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            YN+LI GFC  G +  A     +M+  G  PD ITY T+++ LC++  + +A   +  +
Sbjct: 789 TYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSM 848

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           ++ G+ PD+++Y T+I G C+ G++ KA E    ML + + P
Sbjct: 849 TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKP 890



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 124/243 (51%), Gaps = 10/243 (4%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           L  LK M D G     L+ D   + ++I      G    A  +   MI +G VP+ +T+ 
Sbjct: 667 LGLLKEMHDRG-----LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCR-VNELDKALHLFSTMAN 216
            ++N LCK G + +A+ +  +M      PN  TY  F+    + V ++ KA+ L + +  
Sbjct: 722 AVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK 781

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G+  N  T+N+L+   C++G + +A + +  ++ D     + D IT T ++    +  D
Sbjct: 782 -GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDG---VSPDCITYTTMISELCRRND 837

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A+ LWN M +K I+ D VAYN LI+G C+ G++  A     +ML++G  P+  T  T
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSET 897

Query: 337 LLN 339
            ++
Sbjct: 898 TIS 900



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 1/130 (0%)

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           I KG + +  T+N L+   C+ G +E+A  +I  M     SP+C TY   I+  CR N++
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDV 838

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
            KA+ L+++M   GIRP+RV +N L+H  C  G +G A +   E+L     K  ++   +
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL-KPNTETSET 897

Query: 265 TILMDSYFKN 274
           TI  DS  K+
Sbjct: 898 TISNDSSSKS 907


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 221/437 (50%), Gaps = 3/437 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC    +  ++ +  KM + G  PD +T N L+N LC  G +++A  +  EM +  
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  +Y   I G C+      A+ +F  M  NG +PN VT++ ++ +LCK  L+ DA+
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +FL E++   +     +V T   ++  +   G   +A  L+ +M  +++  + V + +L+
Sbjct: 254 EFLSEMV---ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILV 310

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G +S A   F  M ++G  PD+ TYN L++  C Q  ++EA   + ++ + G A
Sbjct: 311 DGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCA 370

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P   SY  +I G C    + +A+  L  M  K++ P+   ++ ++ G  + G    A ++
Sbjct: 371 PGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNL 430

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M S+G   N+ T+  L+    + G + +A  L K M    + P++  Y +LI     
Sbjct: 431 FKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFI 490

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G + +A +L+ ++   G  PDI TYT +IKG    G   EA ++F K++  G   +   
Sbjct: 491 AGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCS 550

Query: 544 FRILKKRYRRMKESDKA 560
           + ++ + + + ++S  A
Sbjct: 551 YNVMIQGFLQNQDSSTA 567



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 223/416 (53%), Gaps = 3/416 (0%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           +V + N L+N LC++  ++ +  V+ +M ++   P+  T+NA I G C   ++ +A+ LF
Sbjct: 127 NVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELF 186

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
           + M   G  PN +++  +++ LCK G    AV    ++   +      +V+T + ++DS 
Sbjct: 187 NEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKM---EQNGCKPNVVTYSTIIDSL 243

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K+     A+   ++M ++ I  ++  YN +++GFC  G ++ A   F +M+ R  +P+ 
Sbjct: 244 CKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNT 303

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +T+  L++ LCK+G + EA   +  +++ GV PD  +Y  ++ G C+   + +A++    
Sbjct: 304 VTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEI 363

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M+ K   P  H +N++I+GY +   +  A S+   M    ++ +  T++ L+    + G 
Sbjct: 364 MIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGR 423

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
             +A +L KEM   G  P++ TY +L+   C  GH+  AL+L   M  + + P+I+ YT 
Sbjct: 424 PKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTI 483

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           LI+G    G ++ A+E+F+K+   G   D   + ++ K   +   SD+A D+ +K 
Sbjct: 484 LIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKM 539



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 193/393 (49%), Gaps = 3/393 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC  GKI  A+ L  +M+++G  P+V+++  ++N LCK G+   A  V ++M + 
Sbjct: 168 ALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQN 227

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY+  I   C+   ++ A+   S M   GI PN  T+N +VH  C  G L +A
Sbjct: 228 GCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEA 287

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +   E++  D      + +T TIL+D   K G   +A  ++  M +K ++ DI  YN L
Sbjct: 288 TRLFKEMVGRD---VMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNAL 344

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+CL   ++ A   F  M+++G  P   +YN L+N  CK  ++DEA      +    +
Sbjct: 345 MDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKAL 404

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y T++QGLC  G   +A      M      P    + +++DG+ + G L  A  
Sbjct: 405 NPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALK 464

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M    +  N+  +  LI      G +  A  L  ++  DG  PD+ TY ++I    
Sbjct: 465 LLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLL 524

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             G    A  L+ +M   G  P+  +Y  +I+G
Sbjct: 525 KEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQG 557



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 218/439 (49%), Gaps = 15/439 (3%)

Query: 82  NPQAV-FNAL------DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKI 134
           +P A+ FNAL      +  +KE ++    M   G      E +   +  VI  LC  G  
Sbjct: 160 HPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH-----EPNVISYTTVINGLCKTGNT 214

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
             A+ + +KM Q G  P+V+T++ +++ LCK   +  A   + EM E    PN  TYN+ 
Sbjct: 215 SMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSI 274

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           + G+C + +L++A  LF  M    + PN VT  ILV  LCK+G++ +A + + E + +  
Sbjct: 275 VHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEA-RLVFETMTEKG 333

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
                D+ T   LMD Y       +A  ++  M +K       +YN+LING+C +  +  
Sbjct: 334 --VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDE 391

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A +   +M  +   PD +TY+TL+  LC+ G+  EA + +  +   G  P+ ++Y  ++ 
Sbjct: 392 AKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLD 451

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C HG + +A + L SM EK + P    + ++I+G    G L  A  +   +   G   
Sbjct: 452 GFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRP 511

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           ++ T+  +I    + G   +A+ L ++M  DG  P+  +YN++I           A++L 
Sbjct: 512 DIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLI 571

Query: 495 DEMLRRGITPDIITYTELI 513
           DEM+ +  + ++ T+  L+
Sbjct: 572 DEMVGKRFSVNLSTFQMLL 590



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 206/411 (50%), Gaps = 3/411 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL    +M++    P V+     +    K         +  +M   R + N  + N  I 
Sbjct: 77  ALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILIN 136

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
             CR+N +D ++ +   M   GI P+ +T N L++ LC +G + +AV+   E++      
Sbjct: 137 CLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH-- 194

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              +VI+ T +++   K G+   A+ ++  M Q   + ++V Y+ +I+  C +  ++ A 
Sbjct: 195 -EPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            +  +M++RG  P+V TYN++++  C  G+L+EA+  +  +    V P+ +++  ++ GL
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G + +AR    +M EK V P+   +N ++DGY     ++ A  + ++M+  G +   
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            ++N LI    +   + +A SL  EM    + PD  TY+ L+   C LG    AL L+ E
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           M   G  P+++TY  L+ G C  G++ EA ++   ++   L  + + + IL
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTIL 484



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 175/364 (48%), Gaps = 3/364 (0%)

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D AL  F  M     RP+ V     + +  KK      V    ++   D  + T +V +
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQM---DLFRVTHNVYS 130

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             IL++   +      ++++   MF+  I  D + +N LING C  G I  A   F +M+
Sbjct: 131 LNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMV 190

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           KRG  P+VI+Y T++N LCK G    A   +  + + G  P+ ++Y TII  LC    + 
Sbjct: 191 KRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVN 250

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A EFL  M+E+ + P    +N I+ G+   G L+ A  +   M+   V  N  TF  L+
Sbjct: 251 DAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILV 310

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G + +A  + + M   G+ PD+ TYN L+   C    ++ A ++++ M+R+G  
Sbjct: 311 DGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCA 370

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P   +Y  LI G+C    M EA+ + A++    L  D + +  L +   ++    +A ++
Sbjct: 371 PGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNL 430

Query: 564 HQKW 567
            ++ 
Sbjct: 431 FKEM 434



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 159/326 (48%), Gaps = 3/326 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++   C  G++  A  L ++M+ +  +P+ +T   LV+ LCK G + +A  V   M+E 
Sbjct: 273 SIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEK 332

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+ +TYNA + GYC    +++A  +F  M   G  P   ++NIL++  CK   + +A
Sbjct: 333 GVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEA 392

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E+          D +T + LM    + G   +AL L+ +M       ++V Y +L
Sbjct: 393 KSLLAEMYHK---ALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVIL 449

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++GFC +G +  A      M ++   P+++ Y  L+  +   GKL+ A   +  L   G 
Sbjct: 450 LDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGT 509

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  +Y  +I+GL   G   +A +    M +   +P    +NV+I G+ +  D S A  
Sbjct: 510 RPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIR 569

Query: 423 IRDLMLSFGVSSNVFTFNALILAETR 448
           + D M+    S N+ TF  L+  E++
Sbjct: 570 LIDEMVGKRFSVNLSTFQMLLDLESQ 595


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 221/453 (48%), Gaps = 3/453 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V+  L  D   + ++I   C    +  A  +   M QKG   + +++  L++ LC+ G +
Sbjct: 221 VQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRI 280

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A  +  +M+E    P   TY   I          +AL+LF+ M   G  PN  T+ +L
Sbjct: 281 NEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVL 340

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LCK+  + +A K L E+    +      V+T   L+D Y K G    A  + + M  
Sbjct: 341 IDGLCKENKMDEARKMLSEM---SEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
            +   +   YN LI G C    +  A A   +ML+R   P +ITYN+L++  CK   L+ 
Sbjct: 398 NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLES 457

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A     ++++ G+ PDQ +Y   I  LC  G + +A     S+  K V     I+  +ID
Sbjct: 458 AYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALID 517

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           GY + G +  A+S+ + ML+     N +T+N LI    +   + +A SL  +ML  G+ P
Sbjct: 518 GYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKP 577

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            V TY +LIG     G    AL++++ M+  G  PD+ TYT  +  + ++G ++E ++V 
Sbjct: 578 TVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVI 637

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
           AK+   G+  D + + +L   Y R+  + +A D
Sbjct: 638 AKMNEEGILPDLVTYTVLIDGYARLGLTHRAFD 670



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 197/436 (45%), Gaps = 38/436 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G+I  AL L   M +    P V T+  L+  L   G   +A ++  EM E  
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY   I G C+ N++D+A  + S M+  G+ P+ VT+N L+   CK+G++ DA 
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L  + ++  G  T    T   L+    K     +A+AL N M ++ +   ++ YN LI
Sbjct: 390 EILDLMESNSCGPNTR---TYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C   D+ SA+     M + G +PD  TY+  ++ LCK+G+++EA   +  +   GV 
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            +++ Y  +I G C  G I  A   L  ML  + +P  + +NV+I+G  +   +  A S+
Sbjct: 507 ANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSL 566

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL------------------- 464
              ML+ GV   V T+  LI    + G+   A  +   M+                    
Sbjct: 567 VAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFS 626

Query: 465 ----------------DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
                           +GI PD+ TY +LI     LG  H A      M+  G  P +  
Sbjct: 627 QGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYI 686

Query: 509 YTELIKGHCARGNMKE 524
            + LIK       MKE
Sbjct: 687 VSILIKNLSHENRMKE 702



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 193/413 (46%), Gaps = 6/413 (1%)

Query: 159 LVNELCKIGDLEKADHVIREMS---EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           ++   C I D+     V R+M+   E +  P    YN  +    +   +D+   ++  + 
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           NN I PN  T N +V+  CK G + +A  +  +++         D  T T L+  + +N 
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIV---QAGLHPDTFTYTSLILGHCRNK 243

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
               A  ++  M QK  Q + V+Y  LI+G C  G I+ A   F  M +    P V TY 
Sbjct: 244 GVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            L+  L   G+  EA + +  + + G  P+  +Y  +I GLC    + +AR+ L  M EK
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK 363

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
            ++P    +N +IDGY + G + +AF I DLM S     N  T+N LI    +   +  A
Sbjct: 364 GLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKA 423

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            +L  +ML   + P + TYN LI   C +  +  A +L   M   G+ PD  TY+  I  
Sbjct: 424 MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDT 483

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            C  G ++EA  +F  ++  G+  + + +  L   Y ++ + D A  + ++ L
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 191/410 (46%), Gaps = 41/410 (10%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P++ T N +VN  CKIG++ +A+    ++ +    P+  TY + I G+CR   +D A  +
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEV 251

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M   G + N V++  L+H LC+ G + +A+K                          
Sbjct: 252 FLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALK-------------------------- 285

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                       L+ DM + N    +  Y VLI     +G    A   F +M ++G  P+
Sbjct: 286 ------------LFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN 333

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V TY  L++ LCK+ K+DEA      +S+ G+ P  ++Y  +I G C  G I  A E L 
Sbjct: 334 VHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILD 393

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M   S  P    +N +I G  +   +  A ++ + ML   +S ++ T+N+LI  + +  
Sbjct: 394 LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVN 453

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +  A+ L   M  +G+ PD +TY++ I   C  G +  A  L+D +  +G+  + + YT
Sbjct: 454 DLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYT 513

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKES 557
            LI G+C  G +  A  +  ++       +   + +L +   + ++MKE+
Sbjct: 514 ALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 205/458 (44%), Gaps = 32/458 (6%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R +  +I  LC   K+  A+ L  KM+++   P ++T+N L++  CK+ DLE A  ++  
Sbjct: 405 RTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSL 464

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M+E    P+  TY+ FI   C+   +++A  LF ++   G++ N V +  L+   CK G 
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           +  A   L  +L D       +  T  +L++   K     +A +L   M    ++  +V 
Sbjct: 525 IDVAYSLLERMLND---ACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVT 581

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y +LI     +G    A   F  M+  G+ PDV TY   L+    QG L+E       ++
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMN 641

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           + G+ PD ++Y  +I G    G   +A +FL  M++    P  +I +++I        + 
Sbjct: 642 EEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMK 701

Query: 419 --------------NAFSIRDL---------------MLSFGVSSNVFTFNALILAETRG 449
                         N+  I D+               M+  G + +V  + ALI    + 
Sbjct: 702 ETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQ 761

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             + +A  L   M   G+ P    YN L+   C LG    A++L D M+  G+ P + +Y
Sbjct: 762 ERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESY 821

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             L+ G    G+ ++A+ VF  + + G   D + +++L
Sbjct: 822 KLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVL 859



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 182/436 (41%), Gaps = 32/436 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C    + +A  L   M + G VPD  T++  ++ LCK G +E+A  +   +   
Sbjct: 444 SLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK 503

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N   Y A I GYC+V ++D A  L   M N+   PN  T+N+L+  LCK+  + +A
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              + ++L          V+T TIL+    K+G    AL ++N M     Q D+  Y   
Sbjct: 564 SSLVAKMLT---MGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++ +   G +        +M + G LPD++TY  L++   + G    A  F   +  TG 
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680

Query: 363 APDQISYKTIIQGLCIH-----------------------GDIVKAREFLLS------ML 393
            P       +I+ L                           D+ K  E+ ++      M+
Sbjct: 681 KPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMV 740

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           E     +  I+  +I G+ +   L  A  +   M   G+S +   +N+L+    + G   
Sbjct: 741 EHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYA 800

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L   M+ +G+ P + +Y LL+      G    A  ++  +L  G   D + +  LI
Sbjct: 801 EAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLI 860

Query: 514 KGHCARGNMKEAEEVF 529
            G   R  + E  E+ 
Sbjct: 861 DGLLKRDLVDECSELI 876


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 222/476 (46%), Gaps = 40/476 (8%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R    +I   C    +G AL L  +M ++  VP  +++  ++N LC   DL  A+ ++ +
Sbjct: 116 RTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 175

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M+     PN   Y+  I GY     +++A  L   M+ +G+ P+   +N ++  L K G 
Sbjct: 176 MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 235

Query: 239 LGDAVKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
           + +A  +L E+     G+    D +T    +  Y K G   +A   +++M    +  +  
Sbjct: 236 MEEASTYLLEI----QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 291

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            Y VLING    G++  A + F  +   G LPDV T +  ++ L K G++ EA   +  L
Sbjct: 292 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 351

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
            + G+ PD  +Y ++I G C  G++ KA E    M  K + P   I+N ++DG  + GD+
Sbjct: 352 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 411

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             A  + D M   G+  +  T++ +I    +  ++ +AFSL  EM   G+ P  F YN L
Sbjct: 412 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 471

Query: 478 IGASCNLGHIHLALQLYDEMLRRG----------------------------------IT 503
           +   C  G +  A+ L+ EML++G                                  I 
Sbjct: 472 VHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 531

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
           PD +TYT +I  HC  G M+EA  +F ++Q   L +D + F + +K   +  + D+
Sbjct: 532 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV-FALFEKMVAKGVKPDE 586



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 228/471 (48%), Gaps = 8/471 (1%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
            + M+ TG     L+ DY    A+I      G I   L ++  M+  G   +++T+N L+
Sbjct: 33  FEEMQKTG-----LKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLI 87

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           + LCK G +EKA  +++ M  +   PN  T+   I GYCR + + +AL L   M    + 
Sbjct: 88  HGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLV 147

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P+ V++  +++ LC    L  A K L ++     G   + V+ ST++M  Y   G   +A
Sbjct: 148 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFS--GLKPNVVVYSTLIM-GYASEGRIEEA 204

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
             L + M    +  DI  YN +I+     G +  A  Y  ++  RG  PD +T+   +  
Sbjct: 205 RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG 264

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
             K GK+ EA+ ++  +   G+ P+   Y  +I G    G++++A      +    V+P+
Sbjct: 265 YSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPD 324

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
               +  I G  + G +  A  +   +   G+  +VFT+++LI    + G +  AF L  
Sbjct: 325 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHD 384

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           EM L GI P++F YN L+   C  G I  A +L+D M  +G+ PD +TY+ +I G+C   
Sbjct: 385 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 444

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           N+ EA  +F ++ + G+      +  L     +  + +KA ++ ++ L + 
Sbjct: 445 NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 495



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 215/443 (48%), Gaps = 38/443 (8%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M +KG VP+  T+  +   LC+   + +A     EM +    P+    +A I G+ R  +
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D+ L +   M + GI  N +T+N+L+H LCK G +  A + L  ++         +  T
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLG---CKPNSRT 117

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             +L++ Y +  +  +AL L ++M ++N+    V+Y  +ING C   D+S A     +M 
Sbjct: 118 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 177

Query: 324 KRGFLPDVITYNTL-----------------------------------LNCLCKQGKLD 348
             G  P+V+ Y+TL                                   ++CL K GK++
Sbjct: 178 FSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKME 237

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EAS +   +   G+ PD +++   I G    G + +A ++   ML+  ++P   ++ V+I
Sbjct: 238 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 297

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           +G+ + G+L  A SI   + + GV  +V T +A I    + G + +A  +  E+   G+ 
Sbjct: 298 NGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV 357

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PDVFTY+ LI   C  G +  A +L+DEM  +GI P+I  Y  L+ G C  G+++ A ++
Sbjct: 358 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 417

Query: 529 FAKIQTLGLAIDHIPFRILKKRY 551
           F  +   GL  D + +  +   Y
Sbjct: 418 FDGMPEKGLEPDSVTYSTMIDGY 440



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 206/410 (50%), Gaps = 22/410 (5%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G +  AL + R +   G +PDV T +  ++ L K G +++A  V  E+ E    P+  T
Sbjct: 303 AGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 362

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y++ I+G+C+  E++KA  L   M   GI PN   +N LV  LCK G +  A K    + 
Sbjct: 363 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM- 421

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
              +     D +T + ++D Y K+ +  +A +L+++M  K +Q     YN L++G C  G
Sbjct: 422 --PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 479

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           D+  A   F +ML++GF    +++NTL++  CK  K+ EAS  +  +    + PD ++Y 
Sbjct: 480 DMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 538

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T+I   C  G + +A      M E+         N+I+D           F++ + M++ 
Sbjct: 539 TVIDWHCKAGKMEEANLLFKEMQER---------NLIVD---------TVFALFEKMVAK 580

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV  +  T+  +I A  +  ++ +AF L+ E++  G+      ++LLI A C    +  A
Sbjct: 581 GVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 640

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            +L DEM   G+ P +   + L++     G M EA  VF  +++LGL  D
Sbjct: 641 SKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 690



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 225/503 (44%), Gaps = 60/503 (11%)

Query: 119 RRHVAVIRDLCLG----GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + +V V   L +G    G+I  A  L   M   G  PD+  +N +++ L K G +E+A  
Sbjct: 182 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 241

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
            + E+      P+  T+ AFI GY +  ++ +A   F  M ++G+ PN   + +L++   
Sbjct: 242 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 301

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K G L +A+     + A        DV T +  +    KNG   +AL +++++ +K +  
Sbjct: 302 KAGNLMEALSIFRHLHALG---VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 358

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D+  Y+ LI+GFC  G++  AF    +M  +G  P++  YN L++ LCK G +  A   +
Sbjct: 359 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 418

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + + G+ PD ++Y T+I G C   ++ +A      M  K V P   ++N ++ G  + 
Sbjct: 419 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 478

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA------------------- 455
           GD+  A ++   ML  G ++ + +FN LI    +   I +A                   
Sbjct: 479 GDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY 537

Query: 456 ---------------------------------FSLKKEMLLDGIFPDVFTYNLLIGASC 482
                                            F+L ++M+  G+ PD  TY L+I A C
Sbjct: 538 TTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHC 597

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
              ++  A +L DE++ +G+      +  LI   C R ++ EA ++  ++  LGL     
Sbjct: 598 KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 657

Query: 543 PFRILKKRYRRMKESDKARDIHQ 565
               L + +    + D+A  + +
Sbjct: 658 ACSTLVRSFHEAGKMDEATRVFE 680



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 173/387 (44%), Gaps = 26/387 (6%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E L     +++ G V      D   + ++I   C  G++  A  L  +M  KG  P++
Sbjct: 341 VQEALKVFSELKEKGLV-----PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 395

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
             +N LV+ LCK GD+++A  +   M E    P+  TY+  I GYC+   + +A  LF  
Sbjct: 396 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 455

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M + G++P+   +N LVH  CK+G +  A+    E+L     K  +  ++   L+D Y K
Sbjct: 456 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ----KGFATTLSFNTLIDGYCK 511

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA-----------------F 316
           +    +A  L+ +M  K I  D V Y  +I+  C  G +  A                 F
Sbjct: 512 SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVF 571

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           A F +M+ +G  PD +TY  ++   CK+  L EA      +   G+      +  +I  L
Sbjct: 572 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 631

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C   D+ +A + L  M E  + P     + ++  +   G +  A  + + + S G+  + 
Sbjct: 632 CKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT 691

Query: 437 FTFNALILAETRGGSIFDAFSLKKEML 463
            T   L+          DA +L K+++
Sbjct: 692 TTLIDLVNGNLNDTDSEDARNLIKQLV 718



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 103/205 (50%)

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + + G+ P+  +Y  I  GLC    + +A+     M +  + P+ +  + +IDG+ R GD
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +     I+D+M+S G+  N+ T+N LI    + G +  A  + K M+  G  P+  T+ L
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C   ++  AL+L DEM +R + P  ++Y  +I G C   ++  A ++  K+   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 537 LAIDHIPFRILKKRYRRMKESDKAR 561
           L  + + +  L   Y      ++AR
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEAR 205



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 65/141 (46%)

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+  N +T+  +     R   + +A    +EM   G+ PD    + LI      G I   
Sbjct: 5   GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 64

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L++ D M+  GI  ++ITY  LI G C  G M++A E+   + TLG   +   F +L + 
Sbjct: 65  LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 124

Query: 551 YRRMKESDKARDIHQKWLLRN 571
           Y R     +A ++  +   RN
Sbjct: 125 YCREHNMGRALELLDEMEKRN 145


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 220/438 (50%), Gaps = 3/438 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC    +  A+ +  KM + G  P   T N L+N LC  G +++A  +  EM   
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  +YN  I G C+      A+ +F  M  NG +P+ VT+N ++ +LCK  L+ DA
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDA 247

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++FL E+L   D     +V T   ++  +   G   +A  L+ +M  +++  D V   +L
Sbjct: 248 MEFLSEML---DRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTIL 304

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G C  G +S A   F  M ++G  P++ TYN L++  C Q  ++EA   + ++ + G 
Sbjct: 305 VDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGC 364

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           AP   SY  +I G C    + +A+  L  M  K++ P+   ++ ++ G  + G    A +
Sbjct: 365 APGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALN 424

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I   M S+G+  N+ T++ L+    + G + +A  L K M    + P++  + +LI    
Sbjct: 425 IFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMF 484

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G + +A +L+ ++   GI P I TYT +IKG    G   EA ++F K++  G   +  
Sbjct: 485 IAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSC 544

Query: 543 PFRILKKRYRRMKESDKA 560
            + ++ + + + ++S  A
Sbjct: 545 SYNVMIQGFLQNQDSSTA 562



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 231/435 (53%), Gaps = 3/435 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           +  T + L  +M   G   +V + N L+N LC++  ++ A  ++ +M ++   P  +T+N
Sbjct: 103 QYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFN 162

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
           A I G C   ++ +A+ LF+ M   G  PN +++N +++ LCK G    AV    ++   
Sbjct: 163 ALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKM--- 219

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
           +      DV+T   ++DS  K+     A+   ++M  + I  ++  YN +++GFC+ G +
Sbjct: 220 EQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQL 279

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           + A   F +M+ R  +PD +T   L++ LCK+G + EA   +  +++ GV P+  +Y  +
Sbjct: 280 NEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNAL 339

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           + G C+   + +A++    M+ +   P  H +N++I+G+ +   +  A S+   M    +
Sbjct: 340 MDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKAL 399

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           + +  T++ L+    + G   +A ++ KEM   G+ P++ TY++L+   C  GH+  AL+
Sbjct: 400 NPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALK 459

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           L   M  + + P+I+ +T LI+G    G ++ A+E+F+K+   G+      + ++ K   
Sbjct: 460 LLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLL 519

Query: 553 RMKESDKARDIHQKW 567
           +   SD+A D+ +K 
Sbjct: 520 KEGLSDEAYDLFRKM 534



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 199/414 (48%), Gaps = 3/414 (0%)

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           I  AL    +M++    P V      +    K         +  +M     + N  + N 
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            I   CR+N +D A+ +   M   GI P   T N L++ LC +G + +AV+   E++   
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
                 +VI+   +++   K G+   A+ ++  M Q   + D+V YN +I+  C +  ++
Sbjct: 189 H---EPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVN 245

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A  +  +ML RG  P+V TYN +++  C  G+L+EA+  +  +    V PD ++   ++
Sbjct: 246 DAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILV 305

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            GLC  G + +AR    +M EK V P    +N ++DGY     ++ A  + ++M+  G +
Sbjct: 306 DGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCA 365

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
             V ++N LI    +   + +A SL  EM    + PD  TY+ L+   C  G    AL +
Sbjct: 366 PGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNI 425

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + EM   G+ P+++TY+ L+ G C  G++ EA ++   +Q   L  + +   IL
Sbjct: 426 FKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTIL 479



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 196/437 (44%), Gaps = 69/437 (15%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR   E +   +  +I  LC  G    A+ + +KM Q G  PDV+T+N +++ LCK   +
Sbjct: 185 VRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLV 244

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A   + EM +    PN  TYN  + G+C + +L++A  LF  M    + P+ VT  IL
Sbjct: 245 NDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTIL 304

Query: 230 VHALCKKGLLGDAVKFLGEVLAD-----------------------DDGKATSDVI---- 262
           V  LCK+G++ +A + + E + +                       ++ K   +++    
Sbjct: 305 VDGLCKEGMVSEA-RLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQG 363

Query: 263 ------TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
                 +  IL++ + K+    +A +L  +M+ K +  D V Y+ L+ G C  G    A 
Sbjct: 364 CAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEAL 423

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F +M   G LP+++TY+ LL+  CK G LDEA      + +  + P+ + +  +I+G+
Sbjct: 424 NIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGM 483

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
            I G +  A+E    +    + P    + V+I G                +L  G+S   
Sbjct: 484 FIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKG----------------LLKEGLSD-- 525

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
                            +A+ L ++M  DG  P+  +YN++I           A++L DE
Sbjct: 526 -----------------EAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDE 568

Query: 497 MLRRGITPDIITYTELI 513
           M+ +  + ++ T+  L+
Sbjct: 569 MVGKRFSANLSTFQMLL 585



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 175/358 (48%), Gaps = 8/358 (2%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D ++ + ++ L  M D G     +  +   +  ++   C+ G++  A  L ++M+ +  +
Sbjct: 241 DRLVNDAMEFLSEMLDRG-----IPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVM 295

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD +T   LV+ LCK G + +A  V   M+E    PN +TYNA + GYC    +++A  +
Sbjct: 296 PDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKV 355

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M   G  P   ++NIL++  CK   + +A   L E+          D +T + LM  
Sbjct: 356 FEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHK---ALNPDTVTYSTLMQG 412

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             + G   +AL ++ +M    +  ++V Y++L++GFC +G +  A      M ++   P+
Sbjct: 413 LCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPN 472

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           ++ +  L+  +   GKL+ A   +  L   G+ P   +Y  +I+GL   G   +A +   
Sbjct: 473 IVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFR 532

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
            M +   +P    +NV+I G+ +  D S A  + D M+    S+N+ TF  L+  E++
Sbjct: 533 KMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLESQ 590



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 145/297 (48%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
            + S+ K       ++L N M    +  ++ + NVLIN  C    +  A +   +M K G
Sbjct: 94  FLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLG 153

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P   T+N L+N LC +GK+ EA   +  + + G  P+ ISY TII GLC  G+   A 
Sbjct: 154 IHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAV 213

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           +    M +    P+   +N IID   +   +++A      ML  G+  NVFT+N ++   
Sbjct: 214 DVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGF 273

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + +A  L KEM+   + PD  T  +L+   C  G +  A  +++ M  +G+ P+I
Sbjct: 274 CILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNI 333

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            TY  L+ G+C +  M EA++VF  +   G A     + IL   + + +  D+A+ +
Sbjct: 334 STYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSL 390



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 137/287 (47%), Gaps = 3/287 (1%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           ALA +  M + N +  +  +   +  F      S+  +   QM   G   +V + N L+N
Sbjct: 72  ALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLIN 131

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           CLC+   +D A    G + K G+ P   ++  +I GLC  G I +A E    M+ +   P
Sbjct: 132 CLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEP 191

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +N II+G  + G+ S A  +   M   G   +V T+N +I +  +   + DA    
Sbjct: 192 NVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFL 251

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            EML  GI P+VFTYN ++   C LG ++ A +L+ EM+ R + PD +T T L+ G C  
Sbjct: 252 SEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKE 311

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARDI 563
           G + EA  VF  +   G+  +   +  L   Y   R M E+ K  +I
Sbjct: 312 GMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEI 358



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 106/239 (44%)

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           N  I  A A F +M++    P V  +   L    K+ +          +   GV  +  S
Sbjct: 66  NISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYS 125

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
              +I  LC    +  A   L  M +  + P    +N +I+G    G +  A  + + M+
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G   NV ++N +I    + G+   A  + K+M  +G  PDV TYN +I + C    ++
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVN 245

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            A++   EML RGI P++ TY  ++ G C  G + EA  +F ++    +  D +   IL
Sbjct: 246 DAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTIL 304


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 211/410 (51%), Gaps = 7/410 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMI----QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
           +++ LC   +   AL L   M+    + G  PDV+++  ++N L + G L+KA  +  EM
Sbjct: 173 LLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEM 232

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
            +   SPNC TYN  + GYC   +  +A+ +F  M  +G+ P+ VT+N L+  LCK G  
Sbjct: 233 LDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRS 292

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +A K    ++    G      I  T L+  Y   G   Q   L + M +   Q D   +
Sbjct: 293 MEARKVFDSMV--KKGHKPDSSIYGT-LLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIF 349

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N+LI  +  +G +  A   F +M ++G  P+++TY T+++ LC+ GK+D+A   +  L  
Sbjct: 350 NILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLIS 409

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ P+ + ++T+I GLC      KA E  + M+ + + P    +N +++   + G ++ 
Sbjct: 410 EGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTR 469

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A +I DLM+   V  +V T+  LI      G + +A  L + M+LDG+ P+  TYN +I 
Sbjct: 470 AKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIIN 529

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
             C  G I  A  L+ +M  +G+ P I+ Y+ ++ G      +  A+E++
Sbjct: 530 GYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELY 579



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 198/420 (47%), Gaps = 2/420 (0%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL- 210
           D+ T++ ++    + G L+ A   +  +     +    T++  + G C       A+ + 
Sbjct: 95  DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIA 154

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD-GKATSDVITSTILMD 269
              M   G  PN  ++NIL+  LC +     A+  L  ++ADD  G    DV++ T +++
Sbjct: 155 LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVIN 214

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              + G   +A  L+++M  + +  + + YN L++G+C +G    A   F +M + G  P
Sbjct: 215 GLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEP 274

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           DV+TYNTL+  LCK G+  EA   +  + K G  PD   Y T++ G    G +V+  + L
Sbjct: 275 DVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLL 334

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M+     P+ +I+N++I  Y + G +  A      M   G+  N+ T+  ++ A  R 
Sbjct: 335 DVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRV 394

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + DA S    ++ +G+ P+   +  LI   C       A +L  EM+ RGI P+ I +
Sbjct: 395 GKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFF 454

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
             L+   C  G +  A+ +F  +  + +  D I +  L   Y    + D+A  + +  +L
Sbjct: 455 NTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVL 514



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 178/384 (46%), Gaps = 6/384 (1%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P  +  TY+  I    R   LD A      +   G     +T + L+  LC      DA+
Sbjct: 92  PRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAM 151

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ----TDIVAY 299
                 +       T +  +  IL+          QAL L + M   + +     D+V+Y
Sbjct: 152 DIALRRMPALG--CTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSY 209

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
             +ING    G +  A+  F +ML +G  P+ ITYN LL+  C  GK  EA   +  + +
Sbjct: 210 TTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCR 269

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            GV PD ++Y T++  LC +G  ++AR+   SM++K   P+  I+  ++ GY   G L  
Sbjct: 270 DGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQ 329

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
              + D+M+  G   + + FN LI A  + G + +A     +M   G+ P++ TY  ++ 
Sbjct: 330 MHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMD 389

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           A C +G +  A+  +D ++  G+TP+ + +  LI G CA     +AEE+  ++   G+  
Sbjct: 390 ALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICP 449

Query: 540 DHIPFRILKKRYRRMKESDKARDI 563
           + I F  L     +     +A++I
Sbjct: 450 NTIFFNTLLNHLCKEGMVTRAKNI 473



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 117/467 (25%), Positives = 204/467 (43%), Gaps = 38/467 (8%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  GK   A+ + RKM + G  PDV+T+N L+  LCK G   +A  V   M +    P+ 
Sbjct: 252 CSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDS 311

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
           + Y   + GY     L +   L   M  NG +P+    NIL+ A  K G++ +A+    +
Sbjct: 312 SIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSK 371

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +          +++T   +MD+  + G    A++ ++ +  + +  + V +  LI+G C 
Sbjct: 372 MRQQG---LHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCA 428

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG----------------------- 345
                 A     +M+ RG  P+ I +NTLLN LCK+G                       
Sbjct: 429 CDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVIT 488

Query: 346 ------------KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
                       K+DEA+     +   GV P++++Y TII G C +G I  A      M 
Sbjct: 489 YTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMA 548

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            K V P   I++ I+ G  +   ++ A  +   M+  G+   + T+N ++    +     
Sbjct: 549 SKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTD 608

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           DA  +   + L        T+N++I A    G    A  L+  +L RG+ P+++TY  ++
Sbjct: 609 DALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMM 668

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           K    +G ++E +++F  ++  G   D      L  +  +  E  KA
Sbjct: 669 KSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKA 715



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 187/391 (47%), Gaps = 7/391 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++ GT PD    N L+    K G +++A     +M +    PN  TY   +   CRV +
Sbjct: 337 MVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGK 396

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A+  F  + + G+ PN V    L+H LC       A +   E++    G   + +  
Sbjct: 397 VDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGR--GICPNTIFF 454

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           +T L++   K G   +A  +++ M + ++Q D++ Y  LI+G+CL+G +  A      M+
Sbjct: 455 NT-LLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMV 513

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  P+ +TYNT++N  CK G++++A   +  ++  GV P  + Y TI+ GL     I 
Sbjct: 514 LDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIA 573

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGY--GRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
            A+E  L M++  +      +N+I+ G     C D +        ++ F + +   TFN 
Sbjct: 574 AAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNR--TFNI 631

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I A  +GG   +A  L   +L  G+ P+V TY L++ +    G +     L+  + + G
Sbjct: 632 MIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNG 691

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            T D      L+     +G +++A    +KI
Sbjct: 692 CTADSRMLNALVGKLPQKGEVRKAGVYLSKI 722



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 9/286 (3%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           AL+L+N M     + D+  Y+++I      G +  AFA   ++++ G+    IT++ LL 
Sbjct: 84  ALSLFNRM----PRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLK 139

Query: 340 CLCKQGKLDEASHF-YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML----E 394
            LC   +  +A       +   G  P+  SY  +++GLC      +A   L +M+     
Sbjct: 140 GLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTR 199

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
               P+   +  +I+G  R G L  A+ + D ML  G+S N  T+N L+      G   +
Sbjct: 200 GGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKE 259

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  + ++M  DG+ PDV TYN L+   C  G    A +++D M+++G  PD   Y  L+ 
Sbjct: 260 AIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLH 319

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G+   G + +  ++   +   G   DH  F IL   Y +    D+A
Sbjct: 320 GYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEA 365



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 139/297 (46%), Gaps = 3/297 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   K   A  L  +MI +G  P+ +  N L+N LCK G + +A ++   M  + 
Sbjct: 422 LIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD 481

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TY   I GYC   ++D+A  L   M  +G++PN VT+N +++  CK G + DA 
Sbjct: 482 VQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDAC 541

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               ++ +   G     VI STIL    F+      A  L+  M +  I+  I  YN+++
Sbjct: 542 SLFRQMASK--GVNPGIVIYSTIL-HGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIIL 598

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C N     A   F  +    F     T+N +++ L K G+ DEA   +  L   G+ 
Sbjct: 599 QGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLV 658

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           P+ ++Y  +++ L   G + +  +  LS+ +     +  + N ++    + G++  A
Sbjct: 659 PNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKA 715



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 130/310 (41%), Gaps = 42/310 (13%)

Query: 83  PQAVF--NALDLILKENL-DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALW 139
           P  +F    L+ + KE +  R K + D   VR  ++ D   +  +I   CL GK+  A  
Sbjct: 449 PNTIFFNTLLNHLCKEGMVTRAKNIFDL-MVRVDVQCDVITYTTLIDGYCLDGKVDEATK 507

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L   M+  G  P+ +T+N ++N  CK G +E A  + R+M+    +P    Y+  + G  
Sbjct: 508 LLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLF 567

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +   +  A  L+  M   GI+    T+NI++  LC+     DA++    +          
Sbjct: 568 QTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNL---------- 617

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
                  L+D + +N                        +N++I+     G    A   F
Sbjct: 618 ------CLIDFHLQN----------------------RTFNIMIDALLKGGRHDEAKDLF 649

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             +L RG +P+V+TY  ++  L +QG L+E    +  L K G   D      ++  L   
Sbjct: 650 ASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQK 709

Query: 380 GDIVKAREFL 389
           G++ KA  +L
Sbjct: 710 GEVRKAGVYL 719


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 200/391 (51%), Gaps = 3/391 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM+  G    + T N L+  LCK GD+++ + ++ ++ +    PN  TYN FI G C+  
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           ELD A+ +   +   G +P+ +T+N L++ LCK     +A  +LG+++ +       D  
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG---LEPDSY 322

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   L+  Y K G    A  +  D        D   Y  LI+G C  G+ + A A F + 
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L +G  P+VI YNTL+  L  QG + EA+     +S+ G+ P+  ++  ++ GLC  G +
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A   +  M+ K   P+   +N++I GY     + NA  I D+ML  GV  +V+T+N+L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +    +     D     K M+  G  P++FT+N+L+ + C    +  AL L +EM  + +
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            PD +T+  LI G C  G++  A  +F K++
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 208/420 (49%), Gaps = 4/420 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   K   A     KM+ +G  PD  T+N L+   CK G ++ A+ ++ +     
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY + I G C   E ++AL LF+     GI+PN + +N L+  L  +G++ +A 
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+    +     +V T  IL++   K G    A  L   M  K    DI  +N+LI
Sbjct: 412 QLANEM---SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+     + +A      ML  G  PDV TYN+LLN LCK  K ++    Y  + + G A
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+  ++  +++ LC +  + +A   L  M  KSV P+   +  +IDG+ + GDL  A+++
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588

Query: 424 -RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
            R +  ++ VSS+  T+N +I A T   ++  A  L +EM+   + PD +TY L++   C
Sbjct: 589 FRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFC 648

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G+++L  +   EM+  G  P + T   +I   C    + EA  +  ++   GL  + +
Sbjct: 649 KTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 197/438 (44%), Gaps = 6/438 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  L   G    A  +  +M  +G  PDV +    +   CK      A  ++  MS  
Sbjct: 116 AIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQ 175

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N   Y   + G+   N   +   LF  M  +G+     T N L+  LCKKG + + 
Sbjct: 176 GCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKEC 235

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K L +V+         ++ T  + +    + G+   A+ +   + ++  + D++ YN L
Sbjct: 236 EKLLDKVIKRG---VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNL 292

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G C N     A  Y  +M+  G  PD  TYNTL+   CK G +  A    G     G 
Sbjct: 293 IYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF 352

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PDQ +Y+++I GLC  G+  +A       L K + P   ++N +I G    G +  A  
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQ 412

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M   G+   V TFN L+    + G + DA  L K M+  G FPD+FT+N+LI    
Sbjct: 413 LANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 472

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               +  AL++ D ML  G+ PD+ TY  L+ G C     ++  E +  +   G A +  
Sbjct: 473 TQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLF 532

Query: 543 PFRILKK---RYRRMKES 557
            F IL +   RYR++ E+
Sbjct: 533 TFNILLESLCRYRKLDEA 550



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 218/465 (46%), Gaps = 10/465 (2%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MRD G     +  D       ++  C   +   AL L   M  +G   +V+ +  +V   
Sbjct: 137 MRDRG-----ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF 191

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
            +     +   +  +M     S   +T+N  +   C+  ++ +   L   +   G+ PN 
Sbjct: 192 YEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNL 251

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
            T+N+ +  LC++G L  AV+ +G ++         DVIT   L+    KN  KFQ   +
Sbjct: 252 FTYNLFIQGLCQRGELDGAVRMVGCLIEQG---PKPDVITYNNLIYGLCKN-SKFQEAEV 307

Query: 284 W-NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           +   M  + ++ D   YN LI G+C  G +  A       +  GF+PD  TY +L++ LC
Sbjct: 308 YLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC 367

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
            +G+ + A   +      G+ P+ I Y T+I+GL   G I++A +    M EK ++PE  
Sbjct: 368 HEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +N++++G  + G +S+A  +  +M+S G   ++FTFN LI   +    + +A  +   M
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           L +G+ PDV+TYN L+   C        ++ Y  M+ +G  P++ T+  L++  C    +
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
            EA  +  +++   +  D + F  L   + +  + D A  + +K 
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 185/397 (46%), Gaps = 3/397 (0%)

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           G +++A +V   M      P   +YNA ++        D+A  ++  M + GI P+  + 
Sbjct: 90  GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
            I + + CK      A++ L  + +        +V+    ++  +++   K +   L+  
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQG---CEMNVVAYCTVVGGFYEENFKAEGYELFGK 206

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M    +   +  +N L+   C  GD+        +++KRG LP++ TYN  +  LC++G+
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           LD A    G L + G  PD I+Y  +I GLC +    +A  +L  M+ + + P+ + +N 
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +I GY + G +  A  I    +  G   + FT+ +LI      G    A +L  E L  G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           I P+V  YN LI    N G I  A QL +EM  +G+ P++ T+  L+ G C  G + +A+
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            +   + + G   D   F IL   Y    + + A +I
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 121/236 (51%), Gaps = 2/236 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K+  AL +   M+  G  PDV T+N L+N LCK    E      + M E   +PN  T+N
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             +   CR  +LD+AL L   M N  + P+ VT   L+   CK G L  A     ++  +
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM--E 593

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
           +  K +S   T  I++ ++ +  +   A  L+ +M  + +  D   Y ++++GFC  G++
Sbjct: 594 EAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           +  + +  +M++ GF+P + T   ++NCLC + ++ EA+     + + G+ P+ ++
Sbjct: 654 NLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/382 (22%), Positives = 158/382 (41%), Gaps = 42/382 (10%)

Query: 206 KALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           KAL +F++M    G +    T+  ++  L   G      + + EVL D      + ++  
Sbjct: 22  KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYG----KFEAMEEVLVDMRENVGNHMLEG 77

Query: 265 TIL--MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             +  M +Y + G   +A+ ++  M   + +  + +YN +++    +G    A   + +M
Sbjct: 78  VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG------- 375
             RG  PDV ++   +   CK  +   A      +S  G   + ++Y T++ G       
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197

Query: 376 ----------------------------LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
                                       LC  GD+ +  + L  ++++ V+P    +N+ 
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I G  + G+L  A  +   ++  G   +V T+N LI    +     +A     +M+ +G+
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PD +TYN LI   C  G + LA ++  + +  G  PD  TY  LI G C  G    A  
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377

Query: 528 VFAKIQTLGLAIDHIPFRILKK 549
           +F +    G+  + I +  L K
Sbjct: 378 LFNEALGKGIKPNVILYNTLIK 399



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 20/233 (8%)

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           C++  +     F  +  + G      +Y+++I+ L  +G      E L+ M E       
Sbjct: 16  CQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRE------- 68

Query: 402 HIWNVIIDG--------YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           ++ N +++G        YGR G +  A ++ + M  +     VF++NA++      G   
Sbjct: 69  NVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFD 128

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A  +   M   GI PDV+++ + + + C     H AL+L + M  +G   +++ Y  ++
Sbjct: 129 QAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVV 188

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPF----RILKKRYRRMKESDKARD 562
            G        E  E+F K+   G+++    F    R+L K+   +KE +K  D
Sbjct: 189 GGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKK-GDVKECEKLLD 240



 Score = 45.4 bits (106), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 66/178 (37%), Gaps = 52/178 (29%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM- 182
           ++  LC   K+  AL L  +M  K   PD +T   L++  CK GDL+ A  + R+M E  
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596

Query: 183 -----RPS------------------------------PNCATYNAFITGYCRVNELDKA 207
                 P+                              P+  TY   + G+C+   ++  
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALC----------------KKGLLGDAVKFLGEV 249
                 M  NG  P+  T   +++ LC                +KGL+ +AV  + +V
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDV 714


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 210/425 (49%), Gaps = 3/425 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LCL  ++  A+ L  +M+  G  P+  T+  ++N +CK G+   A  ++R+M   
Sbjct: 200 TIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHR 259

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +  P+  TY   I   C+   LD AL  FS M   GI+ N  T+N L+ + C  G   D 
Sbjct: 260 KIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDG 319

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +++     K T +V+T + L+DS  K G   +A  L+N+M  + I+ + + YN L
Sbjct: 320 AQLLRDMITR---KITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSL 376

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G C +  +  A      M+ +G  PD+ TYN L+N  CK  ++D+    +  +S  G+
Sbjct: 377 IYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGM 436

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D ++Y T+IQG C    ++ A++    M+ + V P    + +++DG    G+L  A  
Sbjct: 437 IADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALG 496

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I D M    +  ++  +N +I        + DA+SL   +   G+  D+ +YN+++   C
Sbjct: 497 ILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLC 556

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               +  A  L+ +M   G  PD  TY  LI+ H    ++  + ++  +++  G + D  
Sbjct: 557 KRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDAS 616

Query: 543 PFRIL 547
             +I+
Sbjct: 617 TVKIV 621



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 222/446 (49%), Gaps = 16/446 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C   K+G A     K+ + G  P+ +T N L+N LC  G + +A  ++  M   +
Sbjct: 131 MINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQ 190

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T N  + G C  + + +A+ L + M  NG +PN+ T+  +++ +CK G    A+
Sbjct: 191 HVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASAL 250

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++   +  K    V+T TI++D+  K+G    AL+ +++M  K I+ ++  YN LI
Sbjct: 251 DLLRKM---EHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLI 307

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
             FC  G           M+ R   P+V+T++ L++ L K+GKL EA   Y  +   G+ 
Sbjct: 308 GSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIE 367

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ I+Y ++I GLC    + +A + +  M+ K   P+   +N++I+G+ +   + +   +
Sbjct: 368 PNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRL 427

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+ ++  T++ LI    +   +  A  + +EM+  G+ P + TY +L+   C+
Sbjct: 428 FRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCD 487

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  AL + D+M +  +  DI  Y  +I G C    + +A  +F  + + G+  D   
Sbjct: 488 NGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQS 547

Query: 544 FRI----LKKR---------YRRMKE 556
           + I    L KR         +R+MKE
Sbjct: 548 YNIMLSGLCKRSSLSEADALFRKMKE 573



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 202/406 (49%), Gaps = 7/406 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            L L ++M  KG   D+ T N ++N  C+   L  A   + ++ ++   PN  T+N  + 
Sbjct: 109 VLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLN 168

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C    + +A+ L   M  +   P+ +T N +V+ LC K  + +AV  +  ++A+    
Sbjct: 169 GLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANG--- 225

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              +  T   +++   K+G+   AL L   M  + I+  +V Y ++I+  C +G +  A 
Sbjct: 226 CQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDAL 285

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           ++F +M  +G   +V TYN+L+   C  G+ D+ +     +    + P+ +++  +I  L
Sbjct: 286 SFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSL 345

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD--LSNAFSIRDLMLSFGVSS 434
              G + +A++    M+ + + P    +N +I  YG C D  L  A  + DLM+S G   
Sbjct: 346 VKEGKLTEAKDLYNEMITRGIEPNTITYNSLI--YGLCNDKRLDEANQMMDLMVSKGCDP 403

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +++T+N LI    +   + D   L ++M L G+  D  TY+ LI   C    + +A +++
Sbjct: 404 DIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVF 463

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            EM+ +G+ P I+TY  L+ G C  G ++EA  +  ++    + +D
Sbjct: 464 QEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELD 509



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 196/411 (47%), Gaps = 3/411 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L + M++   +P V+  N L   L +    +    + ++M     + +  T N  I 
Sbjct: 74  AVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMIN 133

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            +CR  +L  A      +   G  PN VT N L++ LC +G + +AV+ +  ++     +
Sbjct: 134 CFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVL---SQ 190

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D+IT   +++         +A+ L   M     Q +   Y  ++N  C +G+ +SA 
Sbjct: 191 HVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASAL 250

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M  R   P V+TY  +++ LCK G+LD+A  F+  +   G+  +  +Y ++I   
Sbjct: 251 DLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSF 310

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G      + L  M+ + + P    ++ +ID   + G L+ A  + + M++ G+  N 
Sbjct: 311 CSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNT 370

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+N+LI        + +A  +   M+  G  PD++TYN+LI   C    +   ++L+ +
Sbjct: 371 ITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRK 430

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           M  RG+  D +TY+ LI+G C    +  A++VF ++ + G+    + + IL
Sbjct: 431 MSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAIL 481



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 181/403 (44%), Gaps = 5/403 (1%)

Query: 168 DLEKADHV--IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
           D++K D V   + M   RP P    +N       R  + D  L L   M   GI  +  T
Sbjct: 68  DIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYT 127

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
            NI+++  C++  LG A   +G++          + +T   L++     G  F+A+ L +
Sbjct: 128 LNIMINCFCRRRKLGFAFSAMGKIFK---LGYEPNTVTFNTLLNGLCLEGRVFEAVELVD 184

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M       D++  N ++NG CL   +S A     +M+  G  P+  TY  +LN +CK G
Sbjct: 185 CMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSG 244

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
               A      +    + P  ++Y  II  LC  G +  A  F   M  K +      +N
Sbjct: 245 NTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYN 304

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            +I  +   G   +   +   M++  ++ NV TF+ALI +  + G + +A  L  EM+  
Sbjct: 305 SLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITR 364

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           GI P+  TYN LI   CN   +  A Q+ D M+ +G  PDI TY  LI G C    + + 
Sbjct: 365 GIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDG 424

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             +F K+   G+  D + +  L + + + ++   A+ + Q+ +
Sbjct: 425 MRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMV 467



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 170/358 (47%), Gaps = 3/358 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I +LC  G++  AL    +M  KG   +V T+N L+   C  G  +    ++R+M 
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI 327

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
             + +PN  T++A I    +  +L +A  L++ M   GI PN +T+N L++ LC    L 
Sbjct: 328 TRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLD 387

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A + +  +++        D+ T  IL++ + K       + L+  M  + +  D V Y+
Sbjct: 388 EANQMMDLMVSKG---CDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYS 444

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI GFC +  +  A   F +M+ +G  P ++TY  LL+ LC  G+L+EA      + K 
Sbjct: 445 TLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKC 504

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            +  D   Y  II G+C    +  A     S+  K V  +   +N+++ G  +   LS A
Sbjct: 505 KMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEA 564

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            ++   M   G   +  T+N LI A  RG  I  +  L +EM   G   D  T  +++
Sbjct: 565 DALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVM 622



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 126/263 (47%), Gaps = 3/263 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E +   + ++I  LC   ++  A  +   M+ KG  PD+ T+N L+N  CK   ++   
Sbjct: 366 IEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGM 425

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + R+MS      +  TY+  I G+C+  +L  A  +F  M + G+ P  +T+ IL+  L
Sbjct: 426 RLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGL 485

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C  G L +A+  L ++      K   D+    I++           A +L+  +  K ++
Sbjct: 486 CDNGELEEALGILDQM---HKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVK 542

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DI +YN++++G C    +S A A F +M + G+ PD  TYNTL+    +   +  +   
Sbjct: 543 RDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQL 602

Query: 354 YGVLSKTGVAPDQISYKTIIQGL 376
              + + G + D  + K ++  L
Sbjct: 603 IEEMKRCGFSSDASTVKIVMDML 625



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 59/123 (47%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           +C +E D   +  +I  +C   K+  A  L   +  KG   D+ ++N +++ LCK   L 
Sbjct: 503 KCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLS 562

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +AD + R+M E    P+  TYN  I  + R N++  ++ L   M   G   +  T  I++
Sbjct: 563 EADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVM 622

Query: 231 HAL 233
             L
Sbjct: 623 DML 625


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 216/418 (51%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +IR LC+ GKIG  L L  KMI +G  P+V+T+  L+N LCK+G    A  ++R M + 
Sbjct: 134 TLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQG 193

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   Y + I   C+  ++ +A +LFS M + GI P+  T+N L+HALC        
Sbjct: 194 NCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHV 253

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E++   + K   +V+  + ++D+  K G   +A  + + M ++ ++ ++V YN L
Sbjct: 254 TALLNEMV---NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNAL 310

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G CL  ++  A   F  M+ +GF PDV++Y+TL+N  CK  ++++A + +  + +  +
Sbjct: 311 MDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKEL 370

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ ++Y T++ GLC  G +  A      M+ +  +P+   + +++D   +   L  A +
Sbjct: 371 IPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIA 430

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   +    +  ++  +  +I    R G +  A  L   +   G+ P+V+TY ++I   C
Sbjct: 431 LLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLC 490

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             G +  A +L+ EM R+G +P+  TY  + +G           ++  ++   G + D
Sbjct: 491 QQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSAD 548



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 221/470 (47%), Gaps = 38/470 (8%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T L L  +M   G  P++ T N L+N  C +  L  A  V+ ++ ++   PN AT+N  I
Sbjct: 77  TVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLI 136

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   ++ + LHLF  M   G +PN VT+  L++ LCK G    A++ L  +   + G
Sbjct: 137 RGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM---EQG 193

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC-------- 307
               DV+  T ++DS  K+    QA  L+++M  + I   I  YN LI+  C        
Sbjct: 194 NCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHV 253

Query: 308 ---LN------------------------GDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
              LN                        G +  A      M+KRG  P+V+TYN L++ 
Sbjct: 254 TALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDG 313

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
            C + ++DEA   +  +   G APD +SY T+I G C    I KA      M  K ++P 
Sbjct: 314 HCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPN 373

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              ++ ++ G    G L +A ++   M++ G   +  ++  L+    +   + +A +L K
Sbjct: 374 TVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLK 433

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            +    + PD+  Y ++I   C  G +  A  L+  +  +G+ P++ TYT +I G C +G
Sbjct: 434 AIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQG 493

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            + EA ++F +++  G + +   + ++ + + R  E+ +   + Q+ L R
Sbjct: 494 LLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLAR 543



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 192/406 (47%), Gaps = 6/406 (1%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           +HN   ++      L+ A      M  M P P+ A +   +    ++      L L   M
Sbjct: 26  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            + GI PN  T NIL+++ C    LG A   L ++L         ++ T   L+      
Sbjct: 86  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGH---QPNIATFNTLIRGLCVE 142

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   + L L++ M  +  Q ++V Y  LING C  G  S+A      M +    PDV+ Y
Sbjct: 143 GKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVY 202

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
            ++++ LCK  ++ +A + +  +   G++P   +Y ++I  LC   +       L  M+ 
Sbjct: 203 TSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVN 262

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             ++P   I++ ++D   + G +  A  + D+M+  GV  NV T+NAL+        + +
Sbjct: 263 SKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDE 322

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  +   M+  G  PDV +Y+ LI   C +  I  A+ L++EM R+ + P+ +TY+ L+ 
Sbjct: 323 AVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMH 382

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKES 557
           G C  G +++A  +F ++ T G   D + + IL     + RR+ E+
Sbjct: 383 GLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEA 428



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 141/331 (42%), Gaps = 70/331 (21%)

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T L+ S  K       L+L + M    I  +I   N+LIN FC    +  AF+   ++LK
Sbjct: 63  TKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILK 122

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G  P++ T+NTL+  LC +GK+ E  H +  +   G  P+ ++Y T+I GLC  G    
Sbjct: 123 LGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSA 182

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A   L SM + +  P+  ++  IID    C D                            
Sbjct: 183 AIRLLRSMEQGNCQPDVVVYTSIIDSL--CKD---------------------------- 212

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL-------------------- 484
                  +  AF+L  EM+  GI P +FTYN LI A CNL                    
Sbjct: 213 -----RQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMP 267

Query: 485 ---------------GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
                          G +  A  + D M++RG+ P+++TY  L+ GHC R  M EA +VF
Sbjct: 268 NVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVF 327

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
             +   G A D + +  L   Y +++  +KA
Sbjct: 328 DTMVCKGFAPDVVSYSTLINGYCKIQRIEKA 358



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 4/234 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I   C   +I  A++L  +M +K  +P+ +T++ L++ LC +G L+ A  + 
Sbjct: 338 DVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALF 397

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P+  +Y   +   C+   LD+A+ L   +  + + P+   + I++  +C+ 
Sbjct: 398 HEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA 457

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A      +          +V T TI+++   + G   +A  L+ +M +K    + 
Sbjct: 458 GELEAARDLFSNL---SSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNG 514

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             YN++  GF  N +         +ML RGF  DV T   L+  L   G LD++
Sbjct: 515 CTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG-LDQS 567



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 63/137 (45%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D + +  VI  +C  G++  A  L   +  KG  P+V T+  ++N LC+ G L +A 
Sbjct: 440 MDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEAS 499

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM     SPN  TYN    G+ R NE  + + L   M   G   +  T  +LV  L
Sbjct: 500 KLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 559

Query: 234 CKKGLLGDAVKFLGEVL 250
              GL     + L E L
Sbjct: 560 SDDGLDQSVKQILSEFL 576


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/418 (32%), Positives = 208/418 (49%), Gaps = 5/418 (1%)

Query: 129 CLG--GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           CLG  G+   AL L  +M   G VPDV T+N L++ L K G L +A  +  EM E    P
Sbjct: 88  CLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVP 147

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           +  TYN+ I G  +V    KA+ L   M  +G  P+ +T++ L+  L K G    A K  
Sbjct: 148 DTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLF 207

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            E+     G+   D IT T LMD+  K G    AL L ++M ++ ++  +V YN LI GF
Sbjct: 208 QEM--KRRGR-KPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGF 264

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
              GD+  A+    +M + G  PDV+TY+ L+  L K  +LDEA      + K G  PD 
Sbjct: 265 GKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDT 324

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           I+Y T+I GL   G +  A      M  K   P+   ++ +I   G+   + +A  + + 
Sbjct: 325 ITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEE 384

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M S G+  ++FT+ ++I    + G + DA  L  EM   G+ PDV TYN  + +    G 
Sbjct: 385 MESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGR 444

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
              A +++++M   G+ PD+ TY  L+ G      + +A  +  ++   G A D + F
Sbjct: 445 FKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKF 502



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 220/444 (49%), Gaps = 3/444 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  L   GK   AL +  +M  KG  P++ T+N LV+ L K G  ++A  ++
Sbjct: 43  DVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLL 102

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM +    P+  TYN  I+   +   L +A  LF+ M   G  P+  T+N L++ L K 
Sbjct: 103 AEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKV 162

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G    A++ L E+   +      DV+T + L+    K+G+  +A  L+ +M ++  + D 
Sbjct: 163 GRSQKAMELLEEM---ERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDS 219

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + +  L++     G +  A     +M +RG  P V+TYN L+    K G L EA +    
Sbjct: 220 ITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDE 279

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + + G  PD ++Y  +I GL     + +A + L  M ++   P+   +N +I+G G+ G 
Sbjct: 280 MKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGL 339

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L++A  + D M S G + +V T++ LI A  +   +  A  L +EM   GI PD+FTY  
Sbjct: 340 LNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCS 399

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +I      G +  A +L+ EM  +G++PD+ITY   +      G  KEA ++F  ++  G
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459

Query: 537 LAIDHIPFRILKKRYRRMKESDKA 560
           L  D   +  L     + KE D A
Sbjct: 460 LLPDVATYDALLLGLSKTKEVDDA 483



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/442 (30%), Positives = 212/442 (47%), Gaps = 8/442 (1%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E L  L  MRD G V      D R +  +I  L   G++  A  L  +M ++G VPD  T
Sbjct: 97  EALRLLAEMRDNGCV-----PDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFT 151

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +N L+  L K+G  +KA  ++ EM      P+  TY++ ITG  +  E  KA  LF  M 
Sbjct: 152 YNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMK 211

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
             G +P+ +T   L+ AL K G + DA++ L E+    +      V+T   L+  + K G
Sbjct: 212 RRGRKPDSITFTALMDALGKAGRVDDALELLDEM---KERGVKPGVVTYNALIAGFGKVG 268

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
           D  +A  L ++M +   + D+V Y+ LI G      +  A     +M K G  PD ITYN
Sbjct: 269 DLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYN 328

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           TL+N L K G L++A   +  +   G  PD ++Y T+I  L     +  A      M   
Sbjct: 329 TLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESV 388

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
            + P+   +  II   G+ G + +A  +   M   G+S +V T+NA + +  RGG   +A
Sbjct: 389 GIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEA 448

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             + ++M   G+ PDV TY+ L+        +  A  L  E++ +G   D + + E ++ 
Sbjct: 449 RKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEI 508

Query: 516 HCARGNMKEAEEVFAKIQTLGL 537
             + GN+ EA E+     + GL
Sbjct: 509 LTSWGNVDEAHELLQFANSKGL 530



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 197/394 (50%), Gaps = 3/394 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+V+T+N L+N L K G  E+A  +  E+   + +P+  +Y+  I    R  + + AL +
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
            + M   G +PN  T+N LV  L K G   +A++ L E+    D     DV T   L+ +
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEM---RDNGCVPDVRTYNCLIST 123

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K G   +A  L+ +M ++    D   YN LI G    G    A     +M + G  PD
Sbjct: 124 LGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPD 183

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+TY++L+  L K G+  +A   +  + + G  PD I++  ++  L   G +  A E L 
Sbjct: 184 VMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLD 243

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M E+ V P    +N +I G+G+ GDL  A+++ D M   G   +V T++ LI    +  
Sbjct: 244 EMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKAS 303

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A  + K+M  +G  PD  TYN LI      G ++ A +L+D M  +G  PD++TY+
Sbjct: 304 QLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYS 363

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            LI        ++ A  +F +++++G+  D   +
Sbjct: 364 TLITALGKAARVESACVLFEEMESVGIQPDLFTY 397



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 205/443 (46%), Gaps = 3/443 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  L   G+   A  L  ++      PDV++++ L+N L + G  E A  V+ EM   
Sbjct: 14  SLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAK 73

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN  +    +  + D+AL L + M +NG  P+  T+N L+  L K G L +A
Sbjct: 74  GCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEA 133

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+    +     D  T   L+    K G   +A+ L  +M +     D++ Y+ L
Sbjct: 134 FTLFAEM---RERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSL 190

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G   +G+   AF  F +M +RG  PD IT+  L++ L K G++D+A      + + GV
Sbjct: 191 ITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGV 250

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  ++Y  +I G    GD+V+A   L  M      P+   ++ +I G  +   L  A  
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQ 310

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M   G   +  T+N LI    + G + DA  L   M   G  PDV TY+ LI A  
Sbjct: 311 VLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALG 370

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               +  A  L++EM   GI PD+ TY  +I      G + +A+ +F++++  GL+ D I
Sbjct: 371 KAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVI 430

Query: 543 PFRILKKRYRRMKESDKARDIHQ 565
            +        R     +AR I +
Sbjct: 431 TYNAFLNSLGRGGRFKEARKIFE 453



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 196/393 (49%), Gaps = 3/393 (0%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
            A++  L   G++  AL L  +M ++G  P V+T+N L+    K+GDL +A +++ EM  
Sbjct: 223 TALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKR 282

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               P+  TY+  ITG  + ++LD+A  +   M   G  P+ +T+N L++ L K GLL D
Sbjct: 283 NGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLND 342

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A +    + +        DV+T + L+ +  K      A  L+ +M    IQ D+  Y  
Sbjct: 343 AGRLFDRMKSKG---CNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCS 399

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +I      G +  A   F +M  +G  PDVITYN  LN L + G+  EA   +  + ++G
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD  +Y  ++ GL    ++  A   L  ++E+    +   ++  ++     G++  A 
Sbjct: 460 LLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAH 519

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +     S G+     ++NALI A  + G + +AF+  +++   G  PD+ +Y+ LI A 
Sbjct: 520 ELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISAL 579

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
              G I  A +L +EM +RG+     +Y+ L++
Sbjct: 580 GQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVR 612



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 150/312 (48%)

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           G  + +V+T   L+++  K G   +A  L+ ++       D+V+Y+ LIN     G   +
Sbjct: 3   GFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEA 62

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A     +M  +G  P++ TYNTL++CL K G+ DEA      +   G  PD  +Y  +I 
Sbjct: 63  ALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIS 122

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
            L   G + +A      M E+  VP+   +N +I G G+ G    A  + + M   G   
Sbjct: 123 TLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPP 182

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +V T+++LI    + G    AF L +EM   G  PD  T+  L+ A    G +  AL+L 
Sbjct: 183 DVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL 242

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           DEM  RG+ P ++TY  LI G    G++ EA  +  +++  G   D + +  L     + 
Sbjct: 243 DEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKA 302

Query: 555 KESDKARDIHQK 566
            + D+A  + +K
Sbjct: 303 SQLDEACQVLKK 314



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 104/249 (41%), Gaps = 36/249 (14%)

Query: 325 RGFL-PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           +GF  P+V+TYN+LLN L K G+ +EA   +  L      PD +SY  +I  L       
Sbjct: 2   KGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSL------- 54

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
                                       GR G    A  +   M + G   N++T+N L+
Sbjct: 55  ----------------------------GRAGKWEAALEVVAEMQAKGCKPNLWTYNTLV 86

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G   +A  L  EM  +G  PDV TYN LI      G +  A  L+ EM  RG  
Sbjct: 87  DCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCV 146

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PD  TY  LI G    G  ++A E+  +++  G   D + +  L     +  E+ KA  +
Sbjct: 147 PDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKL 206

Query: 564 HQKWLLRNK 572
            Q+   R +
Sbjct: 207 FQEMKRRGR 215



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 3/260 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  L    ++ +A  L  +M   G  PD+ T+  ++  L K G ++ AD + 
Sbjct: 358 DVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLF 417

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM     SP+  TYNAF+    R     +A  +F  M  +G+ P+  T++ L+  L K 
Sbjct: 418 SEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKT 477

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             + DA   L E++   +     D +     ++     G+  +A  L      K +    
Sbjct: 478 KEVDDACGLLKELI---EQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGA 534

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
            +YN LI+     G +S AF     + ++G  PD+++Y++L++ L + G++D A      
Sbjct: 535 SSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEE 594

Query: 357 LSKTGVAPDQISYKTIIQGL 376
           +SK G+     SY  +++ L
Sbjct: 595 MSKRGLKLSPRSYSNLVRKL 614


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 210/438 (47%), Gaps = 5/438 (1%)

Query: 131 GGKIGTALWLRRKM--IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
            G +  AL + R+M   +    PD  ++N ++  L + G    A  V  EM +   +PN 
Sbjct: 171 AGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQ 230

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN  I G+ +  +L+    L   M  +G +PN VT+N+L+  LC+ G + +    + E
Sbjct: 231 ITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDE 290

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           + +        D  T +IL D   + GD    L+L+ +  +K +       ++L+NG C 
Sbjct: 291 MTS---YSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCK 347

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           +G ++ A      ++  G +P    YNTL+N  C+   L  A   +  +    + PD I+
Sbjct: 348 DGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHIT 407

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I GLC    I +A + ++ M +  V P    +N +ID YGR G L   F++   M 
Sbjct: 408 YNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQ 467

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G+ SNV +F +++ A  + G I +A ++  +M+   + P+   YN +I A    G   
Sbjct: 468 DKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTE 527

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A  L ++M   G++  I TY  L+KG C    + EAEE+   +   GL  D + +  + 
Sbjct: 528 QAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTII 587

Query: 549 KRYRRMKESDKARDIHQK 566
                  ++D+A ++ Q+
Sbjct: 588 SACCNKGDTDRALELLQE 605



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 209/466 (44%), Gaps = 38/466 (8%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           + L  +R  G        D   +  VI  L   GK   AL +  +M+ +G  P+ +T+N 
Sbjct: 176 EALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNT 235

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           +++   K GDLE    +  +M +    PN  TYN  ++G CR   +D+   L   M +  
Sbjct: 236 MIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYS 295

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           + P+  T++IL   L + G     +   GE L            T +IL++   K+G   
Sbjct: 296 MLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKK---GVIIGAYTCSILLNGLCKDGKVA 352

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A  +   +    +      YN LING+C   D+  AF+ F QM  R   PD ITYN L+
Sbjct: 353 KAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALI 412

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAP---------------------------------- 364
           N LCK   + EA      + K+GV P                                  
Sbjct: 413 NGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIK 472

Query: 365 -DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            + IS+ ++++  C +G I +A   L  M+ K VVP   ++N IID Y   G    AF +
Sbjct: 473 SNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLL 532

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M S GVS+++FT+N L+    +   I +A  L   +   G+ PDV +YN +I A CN
Sbjct: 533 VEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCN 592

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            G    AL+L  EM +  I P + TY  L+    + G + + E ++
Sbjct: 593 KGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLY 638



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 179/381 (46%), Gaps = 9/381 (2%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G   T L L  + ++KG +    T + L+N LCK G + KA+ V+  +      P  A Y
Sbjct: 314 GDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIY 373

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYC+V +L  A  +F  M +  IRP+ +T+N L++ LCK  ++ +A   + E+  
Sbjct: 374 NTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEM-- 431

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            +       V T   L+D+Y + G   +   + +DM  K I+++++++  ++  FC NG 
Sbjct: 432 -EKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGK 490

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I  A A    M+ +  +P+   YN++++   + G  ++A      +  +GV+    +Y  
Sbjct: 491 IPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNL 550

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +++GLC +  I +A E + ++  + + P+   +N II      GD   A  +   M  + 
Sbjct: 551 LLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYD 610

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +   + T++ L+ A    G + D   L + M+   + P    Y    G  C   +     
Sbjct: 611 IRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY----GTRCE--NESKVA 664

Query: 492 QLYDEMLRRGITPDIITYTEL 512
            L  EM  +GI  D    T L
Sbjct: 665 SLKKEMSEKGIAFDDTERTNL 685



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 168/381 (44%), Gaps = 36/381 (9%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P P+ ++ N  +     V         F  +   G RP+    N  V A    G L +A+
Sbjct: 119 PLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEAL 178

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L   +   +G    D  +  +++   +++G    AL ++++M  + +  + + YN +I
Sbjct: 179 AML-RRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMI 237

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G    GD+ + F    QML+ G  P+V+TYN LL+ LC+ G++DE       ++   + 
Sbjct: 238 DGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSML 297

Query: 364 PDQISY-----------------------------------KTIIQGLCIHGDIVKAREF 388
           PD  +Y                                     ++ GLC  G + KA + 
Sbjct: 298 PDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQV 357

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  ++   +VP   I+N +I+GY +  DL  AFSI + M S  +  +  T+NALI    +
Sbjct: 358 LEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCK 417

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
              I +A  L  EM   G+ P V T+N LI A    G +     +  +M  +GI  ++I+
Sbjct: 418 MEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVIS 477

Query: 509 YTELIKGHCARGNMKEAEEVF 529
           +  ++K  C  G + EA  + 
Sbjct: 478 FGSVVKAFCKNGKIPEAVAIL 498



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 123/274 (44%), Gaps = 2/274 (0%)

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N+L+      G  +   A F  ++  G  PD   +N  +      G LDEA      + +
Sbjct: 127 NLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGR 186

Query: 360 TGVAP--DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
           +  AP  D  SY  +I GL   G    A +    M+++ V P    +N +IDG+ + GDL
Sbjct: 187 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDL 246

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
              F +RD ML  G   NV T+N L+    R G + +  +L  EM    + PD FTY++L
Sbjct: 247 EAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSIL 306

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
                  G     L L+ E L++G+     T + L+ G C  G + +AE+V   +   GL
Sbjct: 307 FDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 366

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
                 +  L   Y ++++   A  I ++   R+
Sbjct: 367 VPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRH 400



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 102/222 (45%), Gaps = 2/222 (0%)

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
           C    R  LP + + N LL  L   G+  +    +G+L   G  PD  ++   +Q     
Sbjct: 112 CAGSVRSPLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAA 171

Query: 380 GDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
           GD+ +A   L  M      P P    +NV+I G  R G  S+A  + D M+  GV+ N  
Sbjct: 172 GDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQI 231

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T+N +I    +GG +   F L+ +ML DG  P+V TYN+L+   C  G +     L DEM
Sbjct: 232 TYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEM 291

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
               + PD  TY+ L  G    G+ +    +F +    G+ I
Sbjct: 292 TSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVII 333



 Score = 45.1 bits (105), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 22/99 (22%), Positives = 48/99 (48%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ LC   +I  A  L   +  +G  PDV+++N +++  C  GD ++A  +++EM +  
Sbjct: 551 LLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYD 610

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
             P   TY+  ++       +     L+  M +  + P+
Sbjct: 611 IRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPS 649


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 221/449 (49%), Gaps = 6/449 (1%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D L+ M + G V C+   D   +  VI      G +  A  L ++M+Q+G  PD++T++ 
Sbjct: 205 DLLRMMAEGGTV-CS--PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSS 261

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           +V+ LCK   ++KA+  +R+M      P+  TYN  I GY    +  +A+ +F  M    
Sbjct: 262 VVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 321

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           I P+ V  N L+ +LCK G + +A      +          DV + TI+++ Y   G   
Sbjct: 322 ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQ---NPDVFSYTIMLNGYATKGCLV 378

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
               L++ M    I  DI  +NVLI  +   G +  A   F +M   G  P V+TY T++
Sbjct: 379 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVI 438

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             LC+ GK+D+A   +  +   GV PD+ +Y  +IQG C HG ++KA+E +  ++   + 
Sbjct: 439 AALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMR 498

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
            +   +  II+   + G + +A +I DL ++ G+  +   +N L+      G +  A  +
Sbjct: 499 LDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRV 558

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
              M+  GI P+V  Y  L+   C +G I   L L+ EML++GI P  I Y  +I G   
Sbjct: 559 FDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 618

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G    A+  F ++   G+A++   + I+
Sbjct: 619 AGRTVPAKVKFHEMTESGIAMNKCTYSIV 647



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 188/352 (53%), Gaps = 2/352 (0%)

Query: 194 FITGYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
            + G+C     D+AL  L       G  P+  ++NIL+ +LC +G  G A   L  ++A+
Sbjct: 154 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLL-RMMAE 212

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                + DV+    ++D +FK GD  +A  L+ +M Q+ I  D+V Y+ +++  C    +
Sbjct: 213 GGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAM 272

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A A+  QM+ +G LPD  TYN L+      G+  EA   +  + +  + PD ++  T+
Sbjct: 273 DKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTL 332

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           +  LC +G I +AR+   +M  K   P+   + ++++GY   G L +   + DLML  G+
Sbjct: 333 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 392

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           + +++TFN LI A    G +  A  +  EM   G+ P V TY  +I A C +G +  A++
Sbjct: 393 APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 452

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            +++M+ +G+ PD   Y  LI+G C  G++ +A+E+ ++I   G+ +D + F
Sbjct: 453 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFF 504



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 224/476 (47%), Gaps = 41/476 (8%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           +R  L  D      +++  C   +   AL  L  +  + G VPDV ++N L+  LC  G 
Sbjct: 140 LRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGK 199

Query: 169 LEKADHVIREMSEMRP--SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
             +AD ++R M+E     SP+   YN  I G+ +  +++KA  LF  M   GI P+ VT+
Sbjct: 200 SGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY 259

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           + +VHALCK   +  A  FL +++   +     D  T   L+  Y   G   +A+ ++ +
Sbjct: 260 SSVVHALCKARAMDKAEAFLRQMV---NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKE 316

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN------C 340
           M +++I  D+VA N L+   C  G I  A   F  M  +G  PDV +Y  +LN      C
Sbjct: 317 MRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGC 376

Query: 341 LCKQ-----------------------------GKLDEASHFYGVLSKTGVAPDQISYKT 371
           L                                G LD+A   +  +   GV P  ++Y T
Sbjct: 377 LVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMT 436

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I  LC  G +  A E    M+++ VVP+ + ++ +I G+   G L  A  +   +++ G
Sbjct: 437 VIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  ++  F ++I    + G + DA ++    +  G+ PD   YN+L+   C +G +  AL
Sbjct: 497 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 556

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +++D M+  GI P+++ Y  L+ G+C  G + E   +F ++   G+    I + I+
Sbjct: 557 RVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 612



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 184/406 (45%), Gaps = 7/406 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G  PD+ T N L+      G L+KA  +  EM +    P+  TY   I   CR+ +
Sbjct: 387 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A+  F+ M + G+ P++  ++ L+   C  G L  A + + E++   +     D++ 
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIM---NNGMRLDIVF 503

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              ++++  K G    A  +++      +  D V YN+L++G+CL G +  A   F  M+
Sbjct: 504 FGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 563

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  P+V+ Y TL+N  CK G++DE    +  + + G+ P  I Y  II GL   G  V
Sbjct: 564 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 623

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGY--GRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
            A+     M E  +      +++++ G    RC D    F  ++L  +  V  ++ T N 
Sbjct: 624 PAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD-EAIFLFKELR-AMNVKIDIITLNT 681

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I    +   + +A  L   +   G+ P   TY+++I      G +  A  ++  M   G
Sbjct: 682 MIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAG 741

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             PD      +++    +  +  A    +KI     +++H+   +L
Sbjct: 742 CEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLL 787



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 141/293 (48%), Gaps = 3/293 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I +LC  G++  A  +    +  G  PD + +N L++  C +G +EKA  V   M   
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   Y   + GYC++  +D+ L LF  M   GI+P+ + +NI++  L + G    A
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+   + G A +   T +I++   FKN    +A+ L+ ++   N++ DI+  N +
Sbjct: 626 KVKFHEM--TESGIAMNKC-TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTM 682

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G      +  A   F  + + G +P  +TY+ ++  L K+G ++EA   +  +   G 
Sbjct: 683 IAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGC 742

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            PD      +++ L    +IV+A  +L  + E++   E     +++D +   G
Sbjct: 743 EPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 795



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 42/263 (15%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT---GVAPDQISYKT 371
           A A+F Q+L+ G   D I  + LL   C+  + DEA     +L +T   G  PD  SY  
Sbjct: 132 ALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI--LLHRTPELGCVPDVFSYNI 189

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLS 429
           +++ LC  G   +A + L  M E   V  P +  +N +IDG+ + GD++           
Sbjct: 190 LLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNK---------- 239

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
                                    A  L KEM+  GI PD+ TY+ ++ A C    +  
Sbjct: 240 -------------------------ACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDK 274

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A     +M+ +G+ PD  TY  LI G+ + G  KEA  VF +++   +  D +    L  
Sbjct: 275 AEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMG 334

Query: 550 RYRRMKESDKARDIHQKWLLRNK 572
              +  +  +ARD+     ++ +
Sbjct: 335 SLCKYGKIKEARDVFDTMAMKGQ 357



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/244 (20%), Positives = 104/244 (42%), Gaps = 3/244 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   +E +   +  ++   C  G+I   L L R+M+QKG  P  + +N +++ L + G  
Sbjct: 563 VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRT 622

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A     EM+E   + N  TY+  + G  +    D+A+ LF  +    ++ + +T N +
Sbjct: 623 VPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTM 682

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  + +   + +A      +            +T +I++ +  K G   +A  +++ M  
Sbjct: 683 IAGMFQTRRVEEAKDLFASI---SRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQN 739

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
              + D    N ++       +I  A AY  ++ +R F  + +T   L++    +G   E
Sbjct: 740 AGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799

Query: 350 ASHF 353
              F
Sbjct: 800 QIRF 803


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 200/402 (49%), Gaps = 3/402 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM+  G  P +LT N ++N LCK G +++A  ++  +      PN  TY + I G+CR +
Sbjct: 192 KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNH 251

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            LD A  +F  M  +G  PN VT++ L++ LC +G L +A+  L E++          V 
Sbjct: 252 NLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKG---IEPTVY 308

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T TI + S    G   +A+ L   M ++    +I  +  LI+G   +G    A   + +M
Sbjct: 309 TYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L  G +P  +TYN L+N LC +G+ + A   +  +   G  P   +Y  II+  C+ GDI
Sbjct: 369 LADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA      ML+    P    +N +I GY + G+L+NA  + ++M   G+  + +T+  L
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I   +RGG +  A SL   M+  GI P+  TY  +I    NL  +  AL L+ +M+  G 
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            P   TY  +I G     ++ EAE    K+   GL  + I +
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY 590



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 217/465 (46%), Gaps = 10/465 (2%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E ++ L  M+  G V      + +   A+I  L   GK   A+ L  KM+  G VP  +T
Sbjct: 325 EAVELLGKMKKRGCV-----PNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVT 379

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +N L+N+LC  G  E A  + + M      P+  TYN  I  +C + ++ KA+ +F  M 
Sbjct: 380 YNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKML 439

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
             G  PN +T+N L++  CK+G L +A++ L E++  +  K   D  T T L+  + + G
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLL-EIMKGNGLKP--DAWTYTELISGFSRGG 496

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
               A +L+  M +  I  + V Y  +I+G+     +  A A F +M++ G LP   TYN
Sbjct: 497 KLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYN 556

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            +++   K   + EA +F G + K G+ P+ I+Y + I GLC +G    A +    M ++
Sbjct: 557 VMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNA--FSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           +  P  + ++ +I G  + G   +A  +++   +  +G   NV T+  L+      G  +
Sbjct: 617 NYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCY 676

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L   M   G+ P    Y  L+   C    +  AL ++  M   G    +  Y  LI
Sbjct: 677 EADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALI 736

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
              C    ++EA+ +F  +       D + + +L     +  E+D
Sbjct: 737 CALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETD 781



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 205/460 (44%), Gaps = 48/460 (10%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  G++  A+ +  +M+QKG  P V T+   +  LC  G   +A  ++ +M 
Sbjct: 275 YSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMK 334

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  T+ A I+G  R  + + A+ L+  M  +G+ P  VT+N L++ LC +G   
Sbjct: 335 KRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFE 394

Query: 241 DAVKFLGEVLADDDGKAT---SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            A      +L+     +T   +++I    LM      GD  +A+ +++ M +     +++
Sbjct: 395 TAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM------GDIQKAMVIFDKMLKAGSSPNVI 448

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA-SHFYGV 356
            YN LI G+C  G++++A      M   G  PD  TY  L++   + GKL+ A S FYG+
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G++P+ ++Y  II G      +  A      M+E   +P    +NV+I G+ +   
Sbjct: 509 MEH-GISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY-- 474
           +S A +    M+  G+  NV T+ + I    R G    AF +  EM     FP+++TY  
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627

Query: 475 -----------------------------------NLLIGASCNLGHIHLALQLYDEMLR 499
                                                L+   C  G  + A QL   M +
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           +G+ P    Y  L+ G C    ++ A  +F  + TLG  +
Sbjct: 688 KGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQL 727



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 176/367 (47%), Gaps = 3/367 (0%)

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           + + +D A  ++  M N+GIRP+ +T N +++ LCKKG + +A   +  +   D   A  
Sbjct: 179 KFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYD---AYP 235

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +  T T L+  + +N +   A A+++ M +     + V Y+ LING C  G +  A    
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDML 295

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M+++G  P V TY   L  LC  G   EA    G + K G  P+  ++  +I GL   
Sbjct: 296 EEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRD 355

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G    A      ML   +VP    +N +I+     G    AF+I   MLS G   +  T+
Sbjct: 356 GKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTY 415

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N +I      G I  A  +  +ML  G  P+V TYN LI   C  G+++ A++L + M  
Sbjct: 416 NEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKG 475

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G+ PD  TYTELI G    G ++ A  +F  +   G++ +H+ +  +   Y  + + D 
Sbjct: 476 NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDD 535

Query: 560 ARDIHQK 566
           A  +  K
Sbjct: 536 ALALFWK 542



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 198/429 (46%), Gaps = 40/429 (9%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC+ G+  TA  + + M+  G++P   T+N ++   C +GD++KA  +  +M + 
Sbjct: 382 ALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA 441

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SPN  TYN  I GYC+   L+ A+ L   M  NG++P+  T+  L+    + G L  A
Sbjct: 442 GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHA 501

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW------------------ 284
                 ++   +   + + +T T ++D YF       ALAL+                  
Sbjct: 502 TSLFYGMM---EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 285 -----------------NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
                              M ++ +  +++ Y   I+G C NG    AF  F +M KR +
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHF--YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
            P++ TY++L+  LC++G+ ++A  +     L+  G  P+  +Y T+++GLC  G   +A
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEA 678

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            + ++SM +K + P   I+  ++ G  +   + +A +I   M + G   ++  + ALI A
Sbjct: 679 DQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICA 738

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             +   I +A  + + ML      D   + +L+      G   L L+L   M  R  T +
Sbjct: 739 LCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLN 798

Query: 506 IITYTELIK 514
             TY  L +
Sbjct: 799 FQTYVMLAR 807



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 146/344 (42%), Gaps = 10/344 (2%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+ M+  G     L+ D   +  +I     GGK+  A  L   M++ G  P+ +T+  ++
Sbjct: 470 LEIMKGNG-----LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           +    +  ++ A  +  +M E    P+  TYN  I+G+ + N + +A +    M   G+ 
Sbjct: 525 DGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLL 584

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG--DKF 278
           PN +T+   +  LC+ G  G A K   E+   +      ++ T + L+    + G  +  
Sbjct: 585 PNVITYTSFIDGLCRNGRTGLAFKIFHEM---EKRNYFPNLYTYSSLIYGLCQEGRAEDA 641

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +   L   +     + ++  Y  L+ G C  G    A      M K+G  P    Y  LL
Sbjct: 642 EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
              CK  K++ A + +  +   G       YK +I  LC    I +A+    +MLEK   
Sbjct: 702 IGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWN 761

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +  +W V++DG  + G+      +  +M S   + N  T+  L
Sbjct: 762 SDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 1/248 (0%)

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           K  F   + ++ TLL  L K   +D A   Y  +  +G+ P  +++ T+I  LC  G + 
Sbjct: 160 KYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQ 219

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A+  +  +      P    +  +I G+ R  +L  AF++ D M+  G   N  T++ LI
Sbjct: 220 EAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLI 279

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                 G + +A  + +EM+  GI P V+TY + + + C+ G    A++L  +M +RG  
Sbjct: 280 NGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCV 339

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P+I T+T LI G    G  + A  ++ K+   GL    + +  L  +       + A  I
Sbjct: 340 PNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTI 399

Query: 564 HQKWLLRN 571
             KW+L +
Sbjct: 400 F-KWMLSH 406



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 1/226 (0%)

Query: 344 QGKLDEASHFYGVL-SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           +G++   + F   + SK        S+ T++  L     +  AR+  + ML   + P   
Sbjct: 144 EGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLL 203

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +N +I+   + G +  A  I   +  +    N FT+ +LIL   R  ++  AF++   M
Sbjct: 204 TFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRM 263

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           + DG  P+  TY+ LI   C+ G +  A+ + +EM+++GI P + TYT  +   C  G  
Sbjct: 264 VKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS 323

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            EA E+  K++  G   +   F  L     R  + + A  ++ K L
Sbjct: 324 SEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKML 369


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 216/418 (51%), Gaps = 3/418 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +IR LC+ GKIG  L L  KMI +G  P+V+T+  L+N LCK+G    A  ++R M + 
Sbjct: 143 TLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQG 202

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   Y + I   C+  ++ +A +LFS M + GI P+  T+N L+HALC        
Sbjct: 203 NCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHV 262

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E++   + K   +V+  + ++D+  K G   +A  + + M ++ ++ ++V YN L
Sbjct: 263 TALLNEMV---NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNAL 319

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G CL  ++  A   F  M+ +GF PDV++Y+TL+N  CK  ++++A + +  + +  +
Sbjct: 320 MDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKEL 379

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ ++Y T++ GLC  G +  A      M+ +  +P+   + +++D   +   L  A +
Sbjct: 380 IPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIA 439

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   +    +  ++  +  +I    R G +  A  L   +   G+ P+V+TY ++I   C
Sbjct: 440 LLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLC 499

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             G +  A +L+ EM R+G +P+  TY  + +G           ++  ++   G + D
Sbjct: 500 QQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSAD 557



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 221/470 (47%), Gaps = 38/470 (8%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T L L  +M   G  P++ T N L+N  C +  L  A  V+ ++ ++   PN AT+N  I
Sbjct: 86  TVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLI 145

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   ++ + LHLF  M   G +PN VT+  L++ LCK G    A++ L  +   + G
Sbjct: 146 RGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM---EQG 202

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC-------- 307
               DV+  T ++DS  K+    QA  L+++M  + I   I  YN LI+  C        
Sbjct: 203 NCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHV 262

Query: 308 ---LN------------------------GDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
              LN                        G +  A      M+KRG  P+V+TYN L++ 
Sbjct: 263 TALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDG 322

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
            C + ++DEA   +  +   G APD +SY T+I G C    I KA      M  K ++P 
Sbjct: 323 HCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPN 382

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              ++ ++ G    G L +A ++   M++ G   +  ++  L+    +   + +A +L K
Sbjct: 383 TVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLK 442

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            +    + PD+  Y ++I   C  G +  A  L+  +  +G+ P++ TYT +I G C +G
Sbjct: 443 AIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQG 502

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            + EA ++F +++  G + +   + ++ + + R  E+ +   + Q+ L R
Sbjct: 503 LLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLAR 552



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 192/406 (47%), Gaps = 6/406 (1%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           +HN   ++      L+ A      M  M P P+ A +   +    ++      L L   M
Sbjct: 35  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            + GI PN  T NIL+++ C    LG A   L ++L         ++ T   L+      
Sbjct: 95  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGH---QPNIATFNTLIRGLCVE 151

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   + L L++ M  +  Q ++V Y  LING C  G  S+A      M +    PDV+ Y
Sbjct: 152 GKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVY 211

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
            ++++ LCK  ++ +A + +  +   G++P   +Y ++I  LC   +       L  M+ 
Sbjct: 212 TSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVN 271

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             ++P   I++ ++D   + G +  A  + D+M+  GV  NV T+NAL+        + +
Sbjct: 272 SKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDE 331

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  +   M+  G  PDV +Y+ LI   C +  I  A+ L++EM R+ + P+ +TY+ L+ 
Sbjct: 332 AVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMH 391

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKES 557
           G C  G +++A  +F ++ T G   D + + IL     + RR+ E+
Sbjct: 392 GLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEA 437



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 150/357 (42%), Gaps = 73/357 (20%)

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L DA+     +L      + +D    T L+ S  K       L+L + M    I  +I  
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADF---TKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYT 105

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
            N+LIN FC    +  AF+   ++LK G  P++ T+NTL+  LC +GK+ E  H +  + 
Sbjct: 106 LNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMI 165

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G  P+ ++Y T+I GLC  G    A   L SM + +  P+  ++  IID    C D  
Sbjct: 166 GEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSL--CKD-- 221

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
                                            +  AF+L  EM+  GI P +FTYN LI
Sbjct: 222 -------------------------------RQVTQAFNLFSEMIHQGISPSIFTYNSLI 250

Query: 479 GASCNL-----------------------------------GHIHLALQLYDEMLRRGIT 503
            A CNL                                   G +  A  + D M++RG+ 
Sbjct: 251 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 310

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           P+++TY  L+ GHC R  M EA +VF  +   G A D + +  L   Y +++  +KA
Sbjct: 311 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKA 367



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 4/234 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I   C   +I  A++L  +M +K  +P+ +T++ L++ LC +G L+ A  + 
Sbjct: 347 DVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALF 406

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P+  +Y   +   C+   LD+A+ L   +  + + P+   + I++  +C+ 
Sbjct: 407 HEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA 466

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A      +          +V T TI+++   + G   +A  L+ +M +K    + 
Sbjct: 467 GELEAARDLFSNL---SSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNG 523

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             YN++  GF  N +         +ML RGF  DV T   L+  L   G LD++
Sbjct: 524 CTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG-LDQS 576



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 63/137 (45%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D + +  VI  +C  G++  A  L   +  KG  P+V T+  ++N LC+ G L +A 
Sbjct: 449 MDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEAS 508

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM     SPN  TYN    G+ R NE  + + L   M   G   +  T  +LV  L
Sbjct: 509 KLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 568

Query: 234 CKKGLLGDAVKFLGEVL 250
              GL     + L E L
Sbjct: 569 SDDGLDQSVKQILSEFL 585


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 200/402 (49%), Gaps = 3/402 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM+  G  P +LT N ++N LCK G +++A  ++  +      PN  TY + I G+CR +
Sbjct: 192 KMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNH 251

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            LD A  +F  M  +G  PN VT++ L++ LC +G L +A+  L E++          V 
Sbjct: 252 NLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKG---IEPTVY 308

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T TI + S    G   +A+ L   M ++    +I  +  LI+G   +G    A   + +M
Sbjct: 309 TYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM 368

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L  G +P  +TYN L+N LC +G+ + A   +  +   G  P   +Y  II+  C+ GDI
Sbjct: 369 LADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA      ML+    P    +N +I GY + G+L+NA  + ++M   G+  + +T+  L
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I   +RGG +  A SL   M+  GI P+  TY  +I    NL  +  AL L+ +M+  G 
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            P   TY  +I G     ++ EAE    K+   GL  + I +
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY 590



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 217/465 (46%), Gaps = 10/465 (2%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E ++ L  M+  G V      + +   A+I  L   GK   A+ L  KM+  G VP  +T
Sbjct: 325 EAVELLGKMKKRGCV-----PNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVT 379

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +N L+N+LC  G  E A  + + M      P+  TYN  I  +C + ++ KA+ +F  M 
Sbjct: 380 YNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKML 439

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
             G  PN +T+N L++  CK+G L +A++ L E++  +  K   D  T T L+  + + G
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLL-EIMKGNGLKP--DAWTYTELISGFSRGG 496

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
               A +L+  M +  I  + V Y  +I+G+     +  A A F +M++ G LP   TYN
Sbjct: 497 KLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYN 556

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            +++   K   + EA +F G + K G+ P+ I+Y + I GLC +G    A +    M ++
Sbjct: 557 VMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNA--FSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           +  P  + ++ +I G  + G   +A  +++   +  +G   NV T+  L+      G  +
Sbjct: 617 NYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCY 676

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L   M   G+ P    Y  L+   C    +  AL ++  M   G    +  Y  LI
Sbjct: 677 EADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALI 736

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
              C    ++EA+ +F  +       D + + +L     +  E+D
Sbjct: 737 CALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETD 781



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 205/460 (44%), Gaps = 48/460 (10%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  G++  A+ +  +M+QKG  P V T+   +  LC  G   +A  ++ +M 
Sbjct: 275 YSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMK 334

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  T+ A I+G  R  + + A+ L+  M  +G+ P  VT+N L++ LC +G   
Sbjct: 335 KRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFE 394

Query: 241 DAVKFLGEVLADDDGKAT---SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            A      +L+     +T   +++I    LM      GD  +A+ +++ M +     +++
Sbjct: 395 TAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM------GDIQKAMVIFDKMLKAGSSPNVI 448

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA-SHFYGV 356
            YN LI G+C  G++++A      M   G  PD  TY  L++   + GKL+ A S FYG+
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G++P+ ++Y  II G      +  A      M+E   +P    +NV+I G+ +   
Sbjct: 509 MEH-GISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY-- 474
           +S A +    M+  G+  NV T+ + I    R G    AF +  EM     FP+++TY  
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627

Query: 475 -----------------------------------NLLIGASCNLGHIHLALQLYDEMLR 499
                                                L+   C  G  + A QL   M +
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           +G+ P    Y  L+ G C    ++ A  +F  + TLG  +
Sbjct: 688 KGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQL 727



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 176/367 (47%), Gaps = 3/367 (0%)

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           + + +D A  ++  M N+GIRP+ +T N +++ LCKKG + +A   +  +   D   A  
Sbjct: 179 KFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYD---AYP 235

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +  T T L+  + +N +   A A+++ M +     + V Y+ LING C  G +  A    
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDML 295

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M+++G  P V TY   L  LC  G   EA    G + K G  P+  ++  +I GL   
Sbjct: 296 EEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRD 355

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G    A      ML   +VP    +N +I+     G    AF+I   MLS G   +  T+
Sbjct: 356 GKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTY 415

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N +I      G I  A  +  +ML  G  P+V TYN LI   C  G+++ A++L + M  
Sbjct: 416 NEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKG 475

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G+ PD  TYTELI G    G ++ A  +F  +   G++ +H+ +  +   Y  + + D 
Sbjct: 476 NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDD 535

Query: 560 ARDIHQK 566
           A  +  K
Sbjct: 536 ALALFWK 542



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 198/429 (46%), Gaps = 40/429 (9%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC+ G+  TA  + + M+  G++P   T+N ++   C +GD++KA  +  +M + 
Sbjct: 382 ALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA 441

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SPN  TYN  I GYC+   L+ A+ L   M  NG++P+  T+  L+    + G L  A
Sbjct: 442 GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHA 501

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW------------------ 284
                 ++   +   + + +T T ++D YF       ALAL+                  
Sbjct: 502 TSLFYGMM---EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 285 -----------------NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
                              M ++ +  +++ Y   I+G C NG    AF  F +M KR +
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHF--YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
            P++ TY++L+  LC++G+ ++A  +     L+  G  P+  +Y T+++GLC  G   +A
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEA 678

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            + ++SM +K + P   I+  ++ G  +   + +A +I   M + G   ++  + ALI A
Sbjct: 679 DQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICA 738

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             +   I +A  + + ML      D   + +L+      G   L L+L   M  R  T +
Sbjct: 739 LCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLN 798

Query: 506 IITYTELIK 514
             TY  L +
Sbjct: 799 FQTYVMLAR 807



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 145/344 (42%), Gaps = 10/344 (2%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+ M+  G     L+ D   +  +I     GGK+  A  L   M++ G  P+ +T+  ++
Sbjct: 470 LEIMKGNG-----LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           +    +  ++ A  +  +M E    P+  TYN  I+G+ + N + +A +    M   G+ 
Sbjct: 525 DGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLL 584

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG--DKF 278
           PN +T+   +  LC+ G  G A K   E+   +      ++ T + L+    + G  +  
Sbjct: 585 PNVITYTSFIDGLCRNGRTGLAFKIFHEM---EKRNYFPNLYTYSSLIYGLCQEGRAEDA 641

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +   L   +     + ++  Y  L+ G C  G    A      M K+G  P    Y  LL
Sbjct: 642 EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
              CK  K++ A + +  +   G       YK +I  LC    I +A+    +MLEK   
Sbjct: 702 IGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWN 761

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +   W V++DG  + G+      +  +M S   + N  T+  L
Sbjct: 762 SDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 1/248 (0%)

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           K  F   + ++ TLL  L K   +D A   Y  +  +G+ P  +++ T+I  LC  G + 
Sbjct: 160 KYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQ 219

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A+  +  +      P    +  +I G+ R  +L  AF++ D M+  G   N  T++ LI
Sbjct: 220 EAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLI 279

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                 G + +A  + +EM+  GI P V+TY + + + C+ G    A++L  +M +RG  
Sbjct: 280 NGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCV 339

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P+I T+T LI G    G  + A  ++ K+   GL    + +  L  +       + A  I
Sbjct: 340 PNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTI 399

Query: 564 HQKWLLRN 571
             KW+L +
Sbjct: 400 F-KWMLSH 406



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 1/226 (0%)

Query: 344 QGKLDEASHFYGVL-SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           +G++   + F   + SK        S+ T++  L     +  AR+  + ML   + P   
Sbjct: 144 EGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLL 203

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +N +I+   + G +  A  I   +  +    N FT+ +LIL   R  ++  AF++   M
Sbjct: 204 TFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRM 263

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           + DG  P+  TY+ LI   C+ G +  A+ + +EM+++GI P + TYT  +   C  G  
Sbjct: 264 VKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS 323

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            EA E+  K++  G   +   F  L     R  + + A  ++ K L
Sbjct: 324 SEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKML 369


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 219/465 (47%), Gaps = 37/465 (7%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM   G  PDV T N L+  LC+   L  A  ++ +M      P+  T+   + GY    
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +LD AL +   M   G   + V+ N++VH  CK+G + DA+ F+ E +++ DG    D  
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE-MSNQDG-FFPDQY 296

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   L++   K G    A+ + + M Q+    D+  YN +I+G C  G++  A     QM
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           + R   P+ +TYNTL++ LCK+ +++EA+    VL+  G+ PD  ++ ++IQGLC+  + 
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416

Query: 383 VKAREFLLSMLEKSVVPEPHIWNV-----------------------------------I 407
             A E    M  K   P+   +N+                                   +
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           IDG+ +      A  I D M   GVS N  T+N LI    +   + DA  L  +M+++G 
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PD +TYN L+   C  G I  A  +   M   G  PDI+TY  LI G C  G ++ A +
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           +   IQ  G+ +    +  + +   R +++ +A ++ ++ L +N+
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 206/436 (47%), Gaps = 5/436 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D +    V++     G +  AL +R +M++ G     ++ N +V+  CK G +E A 
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279

Query: 174 HVIREMSEMRPS-PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
           + I+EMS      P+  T+N  + G C+   +  A+ +   M   G  P+  T+N ++  
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LCK G + +AV+ L +++  D    + + +T   L+ +  K     +A  L   +  K I
Sbjct: 340 LCKLGEVKEAVEVLDQMITRD---CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D+  +N LI G CL  +   A   F +M  +G  PD  TYN L++ LC +GKLDEA +
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               +  +G A   I+Y T+I G C      +A E    M    V      +N +IDG  
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +   + +A  + D M+  G   + +T+N+L+    RGG I  A  + + M  +G  PD+ 
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY  LI   C  G + +A +L   +  +GI      Y  +I+G   +    EA  +F ++
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636

Query: 533 QTLGLA-IDHIPFRIL 547
                A  D + +RI+
Sbjct: 637 LEQNEAPPDAVSYRIV 652



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 191/389 (49%), Gaps = 5/389 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   + +VI  LC  G++  A+ +  +MI +   P+ +T+N L++ LCK   +E+A  
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           + R ++     P+  T+N+ I G C       A+ LF  M + G  P+  T+N+L+ +LC
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
            KG L +A+  L ++  +  G A S VIT   L+D + K     +A  ++++M    +  
Sbjct: 447 SKGKLDEALNMLKQM--ELSGCARS-VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR 503

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           + V YN LI+G C +  +  A     QM+  G  PD  TYN+LL   C+ G + +A+   
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             ++  G  PD ++Y T+I GLC  G +  A + L S+  K +   PH +N +I G  R 
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRK 623

Query: 415 GDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGS-IFDAFSLKKEMLLDGIFPDVF 472
              + A ++ R+++       +  ++  +      GG  I +A     E+L  G  P+  
Sbjct: 624 RKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFS 683

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +  +L      L      ++L + ++++ 
Sbjct: 684 SLYMLAEGLLTLSMEETLVKLVNMVMQKA 712



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 199/416 (47%), Gaps = 7/416 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+   +  ++  L + G  +    ++ +M   R     +T+   I  Y +    D+ L +
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140

Query: 211 FSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD-DDGKATSDVITSTILM 268
              M +  G++P+   +N +++ L      G+++K +    A         DV T  +L+
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVD----GNSLKLVEISHAKMSVWGIKPDVSTFNVLI 196

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
            +  +      A+ +  DM    +  D   +  ++ G+   GD+  A     QM++ G  
Sbjct: 197 KALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCS 256

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLS-KTGVAPDQISYKTIIQGLCIHGDIVKARE 387
              ++ N +++  CK+G++++A +F   +S + G  PDQ ++ T++ GLC  G +  A E
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            +  ML++   P+ + +N +I G  + G++  A  + D M++   S N  T+N LI    
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +   + +A  L + +   GI PDV T+N LI   C   +  +A++L++EM  +G  PD  
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           TY  LI   C++G + EA  +  +++  G A   I +  L   + +  ++ +A +I
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 15/196 (7%)

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
           D    R F L+  + +  PEP ++  I+   GR G   +   I + M S        TF 
Sbjct: 63  DSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTF- 121

Query: 441 ALILAETRGGSIFDAFSLKKEML------LD--GIFPDVFTYNLLIGASCNLGHIHLALQ 492
            LIL E+     +  F L+ E+L      +D  G+ PD   YN ++    +   + L   
Sbjct: 122 -LILIES-----YAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEI 175

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
            + +M   GI PD+ T+  LIK  C    ++ A  +   + + GL  D   F  + + Y 
Sbjct: 176 SHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYI 235

Query: 553 RMKESDKARDIHQKWL 568
              + D A  I ++ +
Sbjct: 236 EEGDLDGALRIREQMV 251


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 235/469 (50%), Gaps = 15/469 (3%)

Query: 80  EGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALW 139
              P ++ N  D +     +R+  MR T P+       + +   ++          TA+ 
Sbjct: 31  HSQPPSIQNVDDAV--SQFNRMLCMRHTPPI-----IQFNK---ILDSFAKIKHYSTAVS 80

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L  ++  KG  PD++T N L+N  C +G +     V+ ++ +    P+  T+   I G C
Sbjct: 81  LSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLC 140

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
              +++KALH    +   GI+ ++V++  L++ +CK G    A+K + ++    DG+ T 
Sbjct: 141 LKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKI----DGRLTK 196

Query: 260 -DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            +V     ++D+  K     +A  L+++M  K I  D+V Y  LI GFC+   +  A   
Sbjct: 197 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGL 256

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             +M+ +   P+V TYN L++ LCK+GK+ EA +   V+ K  V PD I+Y T++ G  +
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFL 316

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
             ++ KA+    +M    V P+ H + ++I+G+ +   +  A ++   M    +   + T
Sbjct: 317 VYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +++LI    + G I   + L  EM   GI  +V TYN LI   C  GH+  A+ L+++M 
Sbjct: 377 YSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMK 436

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +GI P   T+T L+ G C  G +K+A+E F  + T G  +D   + ++
Sbjct: 437 DQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVM 485



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 221/447 (49%), Gaps = 3/447 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G+I     +  K++++G  P  +T   L+  LC  G + KA H   ++    
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  +Y   I G C++ +   A+ L   +     +PN   +N ++ ALCK  L+ +A 
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+ A      ++DV+T T L+  +       +A+ L N+M  K I  ++  YN+L+
Sbjct: 220 GLFSEMTAKG---ISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G +  A      MLK    PDVITY+TL++      +L +A H +  +S  GV 
Sbjct: 277 DALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVT 336

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  SY  +I G C +  + +A      M +K++VP    ++ +IDG  + G +S  + +
Sbjct: 337 PDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDL 396

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M   G+ +NV T+N+LI    + G +  A +L  +M   GI P  FT+ +L+   C 
Sbjct: 397 IDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCK 456

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A + + ++L +G   D+  Y  +I GHC +G ++EA  + +K++  G   + + 
Sbjct: 457 GGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVT 516

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           F I+     +  E+DKA  + ++ + R
Sbjct: 517 FDIIINALFKKDENDKAEKLLRQMICR 543



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 209/428 (48%), Gaps = 7/428 (1%)

Query: 114 LETDYRRHV----AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           L+  Y+ H      +I+ LCL G++  AL    K++ +G   D +++  L+N +CKIGD 
Sbjct: 121 LKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDT 180

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A  ++R++      PN   YN  I   C+   + +A  LFS M   GI  + VT+  L
Sbjct: 181 RGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTL 240

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           ++  C    L +A+  L E++         +V T  IL+D+  K G   +A  +   M +
Sbjct: 241 IYGFCIASKLKEAIGLLNEMVLK---TINPNVYTYNILVDALCKEGKVKEAKNVLAVMLK 297

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             ++ D++ Y+ L++G+ L  ++  A   F  M   G  PDV +Y  L+N  CK   +DE
Sbjct: 298 ACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDE 357

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A + +  + +  + P  ++Y ++I GLC  G I    + +  M ++ +      +N +ID
Sbjct: 358 ALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLID 417

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  + G L  A ++ + M   G+    FTF  L+    +GG + DA    +++L  G   
Sbjct: 418 GLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHL 477

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           DV+ YN++I   C  G +  AL +  +M   G  P+ +T+  +I     +    +AE++ 
Sbjct: 478 DVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLL 537

Query: 530 AKIQTLGL 537
            ++   GL
Sbjct: 538 RQMICRGL 545



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 175/318 (55%), Gaps = 4/318 (1%)

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           + T  +I    ++DS+ K      A++L + +  K IQ D++  N+LIN FC  G I+  
Sbjct: 54  RHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFG 113

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           F+   ++LKRG+ P  IT+ TL+  LC +G++++A HF+  L   G+  DQ+SY T+I G
Sbjct: 114 FSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLING 173

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           +C  GD   A + +  +  +   P   ++N IID   +   +S A+ +   M + G+S++
Sbjct: 174 VCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISAD 233

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           V T+  LI        + +A  L  EM+L  I P+V+TYN+L+ A C  G +  A  +  
Sbjct: 234 VVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLA 293

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
            ML+  + PD+ITY+ L+ G+     +K+A+ VF  +  +G+  D   + IL   + + K
Sbjct: 294 VMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNK 353

Query: 556 ESDKA----RDIHQKWLL 569
             D+A    +++HQK ++
Sbjct: 354 MVDEALNLFKEMHQKNMV 371



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 191/399 (47%), Gaps = 15/399 (3%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           +H++  ++   I +++ A      M  MR +P    +N  +  + ++     A+ L   +
Sbjct: 26  SHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRL 85

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              GI+P+ +T NIL++  C  G +      L ++L       T   IT T L+      
Sbjct: 86  ELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHT---ITFTTLIKGLCLK 142

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +AL   + +  + I+ D V+Y  LING C  GD   A     ++  R   P+V  Y
Sbjct: 143 GQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMY 202

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           NT+++ LCK   + EA   +  ++  G++ D ++Y T+I G CI   + +A   L  M+ 
Sbjct: 203 NTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVL 262

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K++ P  + +N+++D   + G +  A ++  +ML   V  +V T++ L+         F 
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLM------DGYFL 316

Query: 455 AFSLKK------EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            + LKK       M L G+ PDV +Y +LI   C    +  AL L+ EM ++ + P I+T
Sbjct: 317 VYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           Y+ LI G C  G +    ++  +++  G+  + I +  L
Sbjct: 377 YSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSL 415



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 151/300 (50%), Gaps = 8/300 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           LKE +  L  M     V  T+  +   +  ++  LC  GK+  A  +   M++    PDV
Sbjct: 250 LKEAIGLLNEM-----VLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDV 304

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T++ L++    + +L+KA HV   MS M  +P+  +Y   I G+C+   +D+AL+LF  
Sbjct: 305 ITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKE 364

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M    + P  VT++ L+  LCK G +      + E+    D    ++VIT   L+D   K
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM---RDRGIPANVITYNSLIDGLCK 421

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           NG   +A+AL+N M  + I+     + +L++G C  G +  A   F  +L +G+  DV  
Sbjct: 422 NGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYK 481

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN ++N  CKQG L+EA      + + G  P+ +++  II  L    +  KA + L  M+
Sbjct: 482 YNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMI 541



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 3/212 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I   C    +  AL L ++M QK  VP ++T++ L++ LCK G +     +I
Sbjct: 338 DVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLI 397

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM +     N  TYN+ I G C+   LD+A+ LF+ M + GIRP   T  IL+  LCK 
Sbjct: 398 DEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKG 457

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L DA +   ++L         DV    ++++ + K G   +AL + + M +     + 
Sbjct: 458 GRLKDAQEAFQDLLTKG---YHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNA 514

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           V ++++IN      +   A     QM+ RG L
Sbjct: 515 VTFDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 47/115 (40%)

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           DA S    ML     P +  +N ++ +   + H   A+ L   +  +GI PD+IT   LI
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
              C  G +     V AKI   G     I F  L K      + +KA   H K L
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLL 156


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 211/399 (52%), Gaps = 3/399 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D      +IR LC+ GKIG AL L  KMI +G  P+V+T+  L+N LCK   + +A +
Sbjct: 112 QPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFN 171

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  EM     SPN  TYN+ I G C++ E      L + M ++ I P+  T N +V ALC
Sbjct: 172 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 231

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G++ +A   +  ++         +V+T   LMD +    +   A+ +++ M  K+   
Sbjct: 232 KEGMVAEAHDVVDMMI---HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 288

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++++YN LING+C    +  A   F +M ++   P+ +TYNTL++ LC  G+L +A   +
Sbjct: 289 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 348

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G  PD ++Y+T+   LC +  + KA   L ++   +  P+  I+  I+DG  R 
Sbjct: 349 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 408

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G+L +A  +   + S G+  NV+T+N +I    + G + +A  L  EM  +G  P+  TY
Sbjct: 409 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 468

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           NL+             ++L +EML RG + D+ T T L+
Sbjct: 469 NLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 507



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 202/417 (48%), Gaps = 3/417 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC   ++  A     K+++ G  PD  T   L+  LC  G + +A H+  +M    
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY   I G C+  ++ +A ++FS M   GI PN VT+N L+H LCK        
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             + E++   D K   DV T   ++D+  K G   +A  + + M  + ++ ++V YN L+
Sbjct: 206 TLMNEMV---DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G CL  ++  A   F  M+ +  + +VI+YNTL+N  CK   +D+A + +  +S+  + 
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 322

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y T+I GLC  G +  A      M+ +  +P+   +  + D   +   L  A ++
Sbjct: 323 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 382

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              +       ++  +  ++    R G + DA  L   +   G+ P+V+TYN++I   C 
Sbjct: 383 LKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCK 442

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            G +  A +L+ EM + G +P+  TY  + +G           E+  ++   G ++D
Sbjct: 443 QGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD 499



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 220/484 (45%), Gaps = 12/484 (2%)

Query: 87  FNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQ 146
           FN LD    E L     M    P   T+  D+ R   ++  +       T L L R+M  
Sbjct: 23  FNTLD----EALSTFNRMLHKQPPPSTV--DFNR---LLTSIAKTKHHSTLLSLSRQMDS 73

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
            G  PDV T   ++N LC +  ++ A   + ++ ++   P+  T+   I G C   ++ +
Sbjct: 74  FGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGE 133

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           ALHLF  M   G +PN VT+  L++ LCK   + +A     E++       + +++T   
Sbjct: 134 ALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKG---ISPNIVTYNS 190

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+    K  +      L N+M    I  D+   N +++  C  G ++ A      M+ RG
Sbjct: 191 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 250

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+V+TYN L++  C + ++D A   +  +       + ISY T+I G C    + KA 
Sbjct: 251 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAM 310

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
                M  + + P    +N +I G    G L +A S+   M++ G   ++ T+  L    
Sbjct: 311 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYL 370

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            +   +  A +L K +      PD+  Y  ++   C  G +  A  L+  +  +G+ P++
Sbjct: 371 CKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNV 430

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            TY  +I G C +G + EA ++F+++   G + +   + ++ + + R  E+ +  ++ ++
Sbjct: 431 WTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEE 490

Query: 567 WLLR 570
            L R
Sbjct: 491 MLAR 494



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 136/517 (26%), Positives = 220/517 (42%), Gaps = 71/517 (13%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D + +  ++  +C  G++  A  L   +  KG  P+V T+N +++ LCK G L +A  
Sbjct: 392 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 451

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  EM++   SPN  TYN    G+ R NE  + + L   M   G   +  T  +LV  L 
Sbjct: 452 LFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLS 511

Query: 235 KKGL----------------------------------------------LGDAVKFLGE 248
             GL                                              L DA+     
Sbjct: 512 DDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNR 571

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +L      +T D    T L+ S  K       L+L   M    I  D+   N+LIN FC 
Sbjct: 572 MLHMHPPPSTVDF---TKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCH 628

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ-------------------GKLDE 349
              +  AF+   ++LK GF PDV+TY TL+N LCK                      L E
Sbjct: 629 LRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCE 688

Query: 350 ASHFYGVLSK---TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
             H   +L++   + + P+ + + T++  LC  G I  A + +  M+++ V P+   +  
Sbjct: 689 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 748

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           ++DG+    ++  A  + D M+  G   NV ++N LI    +   +  A  L ++M L G
Sbjct: 749 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 808

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           +  D  TYN LI   C++G +  A+ L+ EM+  G  PD++TY  L+   C   ++ EA 
Sbjct: 809 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 868

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            +   I+   L  D + + I      R  E + ARD+
Sbjct: 869 VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDL 905



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 191/409 (46%), Gaps = 3/409 (0%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           +HN   ++      L++A      M   +P P+   +N  +T   +       L L   M
Sbjct: 12  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            + GI P+  T  I++++LC    +  A   L ++L         D  T T L+      
Sbjct: 72  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGH---QPDATTFTTLIRGLCVE 128

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +AL L++ M  +  Q ++V Y  LING C +  ++ AF  F +M+ +G  P+++TY
Sbjct: 129 GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTY 188

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N+L++ LCK  +    +     +  + + PD  +  T++  LC  G + +A + +  M+ 
Sbjct: 189 NSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH 248

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           + V P    +N ++DG+    ++  A  + D M+     +NV ++N LI    +  S+  
Sbjct: 249 RGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK 308

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L +EM    + P+  TYN LI   C++G +  A+ L+ EM+ RG  PD++TY  L  
Sbjct: 309 AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 368

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
             C   ++ +A  +   I+      D   +  +     R  E + ARD+
Sbjct: 369 YLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDL 417



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 187/385 (48%), Gaps = 9/385 (2%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M  + P    +++N F +     N LD+AL  F+ M +    P+ V  N L+ ++ K   
Sbjct: 1   MLSLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKH 60

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDS--YFKNGD-KFQALALWNDMFQKNIQTD 295
               +    ++   D      DV T  I+++S  +    D  F ALA    + +   Q D
Sbjct: 61  HSTLLSLSRQM---DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALA---KILKLGHQPD 114

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
              +  LI G C+ G I  A   F +M+  GF P+V+TY TL+N LCK  ++ EA + + 
Sbjct: 115 ATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFS 174

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +   G++P+ ++Y ++I GLC   +       +  M++  ++P+    N ++D   + G
Sbjct: 175 EMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEG 234

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            ++ A  + D+M+  GV  NV T+NAL+        +  A  +   M+      +V +YN
Sbjct: 235 MVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYN 294

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            LI   C +  +  A+ L++EM R+ +TP+ +TY  LI G C  G +++A  +F ++   
Sbjct: 295 TLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVAR 354

Query: 536 GLAIDHIPFRILKKRYRRMKESDKA 560
           G   D + +R L     + +  DKA
Sbjct: 355 GQIPDLVTYRTLSDYLCKNRHLDKA 379



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 183/403 (45%), Gaps = 29/403 (7%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           L+ A      M  M P P+   +   +T   ++      L L + M + GI P+  T NI
Sbjct: 562 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 621

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L+++ C    LG A   L ++L         DV+T   LM+   K             M 
Sbjct: 622 LINSFCHLRRLGYAFSVLAKLLK---LGFQPDVVTYGTLMNGLCK-------------MI 665

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            K I  DI  YN LI+  C   +         +M+    +P+V+ ++T+++ LCK+G + 
Sbjct: 666 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIA 725

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            A     ++ K GV PD ++Y  ++ G C+  ++ +A +   +M+ K  VP    +N++I
Sbjct: 726 IAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILI 785

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           +GY +   +  A  + + M   G+ ++  T+N LI      G +  A +L  EM+  G  
Sbjct: 786 NGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI 845

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PD+ TY +L+   C   H+  A+ L   +    +  DI+ Y   I G C  G ++ A ++
Sbjct: 846 PDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDL 905

Query: 529 FAKIQTLGLAIDHIPFRIL-------------KKRYRRMKESD 558
           F+ + + GL  D   + I+              K +R+M E+D
Sbjct: 906 FSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEND 948



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 131/248 (52%), Gaps = 3/248 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            V+  LC  G I  A  +   MI++G  PDV+T+  L++  C   ++++A  V   M   
Sbjct: 713 TVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 772

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  +YN  I GYC++  +DKA+ L   M+  G+  + VT+N L+H LC  G L  A
Sbjct: 773 GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHA 832

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E++A        D++T  IL+D   KN    +A+ L   +   N+  DI+ YN+ 
Sbjct: 833 IALFHEMVASGQ---IPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIA 889

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C  G++ +A   F  +  +G  PDV TYN +++ LCK+G LDEA+  +  + +  +
Sbjct: 890 IDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDI 949

Query: 363 APDQISYK 370
             +  S +
Sbjct: 950 WSNSTSSR 957



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 136/280 (48%), Gaps = 6/280 (2%)

Query: 118 YRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR 177
           Y   +  + +LC    + T L    +M+    +P+V+  + +V+ LCK G +  A  V+ 
Sbjct: 676 YNSLIHALCNLCEWKHVTTLL---NEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVD 732

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
            M +    P+  TY A + G+C  +E+D+A+ +F TM + G  PN  ++NIL++  C+  
Sbjct: 733 MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQ 792

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            +  A+  L ++         +D +T   L+      G    A+AL+++M       D+V
Sbjct: 793 RMDKAMGLLEQMSLQG---LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLV 849

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            Y +L++  C N  ++ A      +       D++ YN  ++ +C+ G+L+ A   +  L
Sbjct: 850 TYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 909

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           S  G+ PD  +Y  +I GLC  G + +A +    M E  +
Sbjct: 910 SSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDI 949



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 133/273 (48%), Gaps = 5/273 (1%)

Query: 52  TLNDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAVF--NALDLILKENLDRLKTMRDTGP 109
           T N ++  + + C  K      N+  +++  P  V     +D + KE +  +        
Sbjct: 675 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 734

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++  +E D   + A++   CL  ++  A+ +   M+ KG VP+V ++N L+N  C+I  +
Sbjct: 735 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 794

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           +KA  ++ +MS      +  TYN  I G C V  L  A+ LF  M  +G  P+ VT+ IL
Sbjct: 795 DKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRIL 854

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LCK   L +A+  L  +   +     +D++   I +D   + G+   A  L++++  
Sbjct: 855 LDYLCKNHHLAEAMVLLKAI---EGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSS 911

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           K +Q D+  YN++I+G C  G +  A   F +M
Sbjct: 912 KGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944



 Score = 42.7 bits (99), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 38/68 (55%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +   I  +C  G++  A  L   +  KG  PDV T+N +++ LCK G L++A+
Sbjct: 879 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN 938

Query: 174 HVIREMSE 181
            + R+M E
Sbjct: 939 KLFRKMDE 946


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 206/394 (52%), Gaps = 5/394 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM+  G    + T N L++ LCK GD+++ + ++ ++ +    PN  TYN FI G C+  
Sbjct: 206 KMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKG 265

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           ELD A+ +   + + G +P+ VT+N L++ LCK     +A  +LG+++ +       D  
Sbjct: 266 ELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEG---LEPDSF 322

Query: 263 TSTILMDSYFKNG-DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           T   L+  Y K G  +     L N +F   +  D   Y  LI+G C  G+ + A A F +
Sbjct: 323 TYNTLIAGYCKGGMVQLAERILVNAVFNGFV-PDEFTYRSLIDGLCHEGETNRALALFNE 381

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
            L +G  P+VI YNTL+  L  QG + EA+     +S+ G+ P+  ++  ++ GLC  G 
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGC 441

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           +  A   +  M+ K   P+   +N++I GY     + NA  I D+M+  GV  +V+T+N+
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNS 501

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           L+    +     D     K M+  G  P++FT+N+L+ + C    +  AL L +EM  + 
Sbjct: 502 LLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKS 561

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           + PD +T+  LI G C  G++  A  +F K++ +
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEV 595



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 216/454 (47%), Gaps = 39/454 (8%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I+ LC  G++  A+ +  ++I +G  PDV+T+NYL+  LCK    ++A+  + ++     
Sbjct: 258 IQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGL 317

Query: 185 SPNCATYNAFITGYCR-----------VN------------------------ELDKALH 209
            P+  TYN  I GYC+           VN                        E ++AL 
Sbjct: 318 EPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALA 377

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           LF+     GI+PN + +N L+  L  +GL+ +A +   E+    +     +V T  IL++
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEM---SEKGLIPEVQTFNILVN 434

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K G    A  L   M  K    DI  +N+LI+G+     + +A      M+  G  P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDP 494

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           DV TYN+LLN LCK  K ++    Y  + + G AP+  ++  +++ LC +  + KA   L
Sbjct: 495 DVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLL 554

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETR 448
             M  KSV P+   +  +IDG+ + GDL  A+++ R +   + VS +  T+N +I A T 
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTE 614

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
             ++  A  L +EM+   + PD +TY L++   C  G++ L  +   EM+  G  P + T
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTT 674

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
              +I   C    + EA  +  ++   GL  + +
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 200/450 (44%), Gaps = 5/450 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  L   G    A  +  +M  +G  PDV +    +   C+      A  ++  MS  
Sbjct: 116 AIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQ 175

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N   Y   + G+   N  D+   LF  M  +G+     T N L+H LCKKG + + 
Sbjct: 176 GCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKEC 235

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K L +V+         ++ T    +    + G+   A+ +   +  +  + D+V YN L
Sbjct: 236 EKLLDKVIKRG---VLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYL 292

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G C N     A  Y  +++  G  PD  TYNTL+   CK G +  A          G 
Sbjct: 293 IYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGF 352

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD+ +Y+++I GLC  G+  +A       L K + P   ++N +I G    G +  A  
Sbjct: 353 VPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQ 412

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M   G+   V TFN L+    + G + DA  L K M+  G FPD+FT+N+LI    
Sbjct: 413 LASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 472

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               +  AL++ D M+  G+ PD+ TY  L+ G C     ++  E +  +   G A +  
Sbjct: 473 TQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLF 532

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLRNK 572
            F IL +   R  + DKA  + ++  ++NK
Sbjct: 533 TFNILLESLCRYHKLDKALGLLEE--MKNK 560



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 216/464 (46%), Gaps = 8/464 (1%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MRD G     +  D       ++  C   +   AL L   M  +G   +V+ +  +V   
Sbjct: 137 MRDRG-----ITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF 191

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
            +    ++   +  +M     S   +T+N  +   C+  ++ +   L   +   G+ PN 
Sbjct: 192 YEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNL 251

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
            T+N  +  LC+KG L  AV+ +G ++   D     DV+T   L+    KN    +A   
Sbjct: 252 FTYNFFIQGLCQKGELDAAVRMVGRLI---DQGPKPDVVTYNYLIYGLCKNSKFQEAEVY 308

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
              +  + ++ D   YN LI G+C  G +  A       +  GF+PD  TY +L++ LC 
Sbjct: 309 LGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCH 368

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
           +G+ + A   +      G+ P+ I Y T+I+GL   G I++A +    M EK ++PE   
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQT 428

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N++++G  + G +S+A  +  +M+S G   ++FTFN LI   +    + +A  +   M+
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMM 488

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
            +G+ PDV+TYN L+   C        ++ Y  M+ +G  P++ T+  L++  C    + 
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLD 548

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           +A  +  +++   +  D + F  L   + +  + D A  + +K 
Sbjct: 549 KALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 176/398 (44%), Gaps = 38/398 (9%)

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFIT------------------------------ 196
           G +++A +V   M      P   +YNA ++                              
Sbjct: 90  GKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSF 149

Query: 197 -----GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
                 +CR +    AL L + M++ G   N V +  +V    ++    +  +  G++LA
Sbjct: 150 TIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLA 209

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                  S   T   L+    K GD  +   L + + ++ +  ++  YN  I G C  G+
Sbjct: 210 SGVSLCLS---TFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGE 266

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           + +A     +++ +G  PDV+TYN L+  LCK  K  EA  + G L   G+ PD  +Y T
Sbjct: 267 LDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNT 326

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G C  G +  A   L++ +    VP+   +  +IDG    G+ + A ++ +  L  G
Sbjct: 327 LIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKG 386

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  NV  +N LI   +  G I +A  L  EM   G+ P+V T+N+L+   C +G +  A 
Sbjct: 387 IKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            L   M+ +G  PDI T+  LI G+  +  M+ A E+ 
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL 484



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 119/236 (50%), Gaps = 2/236 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K+  AL +   M+  G  PDV T+N L+N LCK    E      + M E   +PN  T+N
Sbjct: 476 KMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFN 535

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             +   CR ++LDKAL L   M N  + P+ VT   L+   CK G L  A     ++  +
Sbjct: 536 ILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM--E 593

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
           +    +    T  I++ ++ +  +   A  L+ +M  + +  D   Y ++++GFC  G++
Sbjct: 594 EVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
              + +  +M++ GF+P + T   ++NCLC + ++ EA+     + + G+ P+ ++
Sbjct: 654 DLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/382 (22%), Positives = 159/382 (41%), Gaps = 42/382 (10%)

Query: 206 KALHLFSTM-ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           KAL +F++M   +G +    T+  ++  L   GL G   + + EVL D      + ++  
Sbjct: 22  KALEMFNSMRKEDGFKHTLSTYRSIIEKL---GLYG-KFEAMEEVLVDMRQNVGNHMLEG 77

Query: 265 TIL--MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             +  M +Y + G   +A+ ++  M   + +  + +YN +++    +G    A   + +M
Sbjct: 78  VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRM 137

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG------- 375
             RG  PDV ++   +   C+  +   A      +S  G   + ++Y T++ G       
Sbjct: 138 RDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197

Query: 376 ----------------------------LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
                                       LC  GD+ +  + L  ++++ V+P    +N  
Sbjct: 198 DEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFF 257

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I G  + G+L  A  +   ++  G   +V T+N LI    +     +A     +++ +G+
Sbjct: 258 IQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGL 317

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PD FTYN LI   C  G + LA ++    +  G  PD  TY  LI G C  G    A  
Sbjct: 318 EPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALA 377

Query: 528 VFAKIQTLGLAIDHIPFRILKK 549
           +F +    G+  + I +  L K
Sbjct: 378 LFNEALGKGIKPNVILYNTLIK 399



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 92/206 (44%), Gaps = 15/206 (7%)

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           C++  +     F  +  + G      +Y++II+ L ++G      E L+ M +       
Sbjct: 16  CQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQ------- 68

Query: 402 HIWNVIIDG--------YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           ++ N +++G        YGR G +  A ++ + M  +     VF++NA++      G   
Sbjct: 69  NVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFD 128

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A  +   M   GI PDV+++ + + + C     H AL+L + M  +G   +++ Y  ++
Sbjct: 129 QAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVV 188

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAI 539
            G        E  E+F K+   G+++
Sbjct: 189 GGFYEENFKDEGYELFGKMLASGVSL 214


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 223/453 (49%), Gaps = 8/453 (1%)

Query: 90  LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
           LD +L EN  ++     +   R   E +   +  +++ LC   ++  A  L  +M  KG 
Sbjct: 156 LDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGC 215

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            PDV+++  +++ + K+G +E+A    RE+S +R  PN + YNA I G+CR  ++ +   
Sbjct: 216 EPDVVSYTTVISSMSKLGKVEEA----RELS-IRFQPNVSVYNALINGFCREYKVKEVFL 270

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L   M   GI PN +T++ ++ +L   G +  A+    ++        + +V T T LM 
Sbjct: 271 LLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRG---CSPNVYTFTSLMK 327

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
            YF  G   +AL +WN M ++  + ++VAYN LI+G C +G +  A +   +M + G  P
Sbjct: 328 GYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSP 387

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           +V TY  L++   K G L  AS  +  +   G  P+ + Y +++  LC      +A   +
Sbjct: 388 NVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLI 447

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M   +  P    +N  I G    G +  A ++   M  +G S N+ T+N ++    + 
Sbjct: 448 EKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKE 507

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             I +A  L  EM   G+  ++ TYN + G  CN+G    AL+L  +ML  G+ PD ITY
Sbjct: 508 NRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITY 567

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             L   +C +G +K A ++  K+   G  +  +
Sbjct: 568 NTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEV 600



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 201/420 (47%), Gaps = 4/420 (0%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           ++ +L  + +   +    + +   + A+I   C   K+     L  +M++KG  P+V+T+
Sbjct: 228 SMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITY 287

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           + +++ L  IG++E A  V  +M     SPN  T+ + + GY     + +AL++++ MA 
Sbjct: 288 STVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAE 347

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G  PN V +N L+H LC  G +G+AV    ++   +    + +V T   L+D + K GD
Sbjct: 348 EGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKM---ERNGCSPNVSTYGALIDGFAKAGD 404

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
              A  +WN M       ++V Y  ++N  C +   S A++   +M      P+ +T+NT
Sbjct: 405 LVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNT 464

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
            +  LC  G+++ A + +  + + G +P+  +Y  ++ GL     I +A E +  M EK 
Sbjct: 465 FIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKG 524

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           +      +N I  G+   G    A  +   ML  GV  +  T+N L  A    G +  A 
Sbjct: 525 MELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAI 584

Query: 457 SLKKEMLLDGIF-PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            L  ++   G + P+V  Y  L+   CN   +  A+   D+ML  GI  +  T+  L++G
Sbjct: 585 QLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRG 644



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/433 (23%), Positives = 207/433 (47%), Gaps = 8/433 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL +  ++ + G  P V  +N+L++ +      +  + +   M      PN  TYN  + 
Sbjct: 133 ALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLK 192

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
             C+ N +D A  L   M+N G  P+ V++  ++ ++ K G + +A +           +
Sbjct: 193 ALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL--------SIR 244

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              +V     L++ + +     +   L   M +K I  +++ Y+ +I+     G++  A 
Sbjct: 245 FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELAL 304

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           A + +M  RG  P+V T+ +L+     +G++ EA + +  +++ G  P+ ++Y T+I GL
Sbjct: 305 AVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGL 364

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C HG + +A      M      P    +  +IDG+ + GDL  A  I + M++ G   NV
Sbjct: 365 CSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNV 424

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
             + +++    R      A+SL ++M  D   P+  T+N  I   C  G +  A+ L+ +
Sbjct: 425 VVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQ 484

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M + G +P+I TY E++ G      +KEA E+  +++  G+ ++ + +  +   +  + +
Sbjct: 485 MEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGK 544

Query: 557 SDKARDIHQKWLL 569
            ++A  +  K L+
Sbjct: 545 FEEALKLLGKMLV 557



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 197/408 (48%), Gaps = 8/408 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M + G  P+V T+N L+  LCK   ++ A  ++ EMS     P+  +Y   I+   ++ +
Sbjct: 175 MKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGK 234

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +++A  L     +   +PN   +N L++  C++  + +    LG+++   +     +VIT
Sbjct: 235 VEEAREL-----SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMV---EKGIDPNVIT 286

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            + ++ S    G+   ALA+W  MF +    ++  +  L+ G+ + G +  A   + +M 
Sbjct: 287 YSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMA 346

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           + GF P+V+ YNTL++ LC  GK+ EA      + + G +P+  +Y  +I G    GD+V
Sbjct: 347 EEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLV 406

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A E    M+    +P   ++  +++   R    S A+S+ + M +     N  TFN  I
Sbjct: 407 GASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFI 466

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                 G +  A +L  +M   G  P++ TYN ++        I  AL+L  EM  +G+ 
Sbjct: 467 KGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGME 526

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            +++TY  +  G C  G  +EA ++  K+   G+  D I +  L   Y
Sbjct: 527 LNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAY 574



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 175/363 (48%), Gaps = 9/363 (2%)

Query: 207 ALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           A + F ++AN+   +  ++T+ I++  L ++  + D V++L + +  +    + D+  + 
Sbjct: 62  ASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDV-DGVQYLLQQMKLEGISCSEDLFINV 120

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           I  ++Y + G   QAL ++  + +   Q  +  YN L++              +  M + 
Sbjct: 121 I--NTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRD 178

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  P+V TYN LL  LCK  ++D A      +S  G  PD +SY T+I  +   G + +A
Sbjct: 179 GKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA 238

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           RE     L     P   ++N +I+G+ R   +   F +   M+  G+  NV T++ +I +
Sbjct: 239 RE-----LSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISS 293

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
            +  G++  A ++  +M + G  P+V+T+  L+      G +  AL +++ M   G  P+
Sbjct: 294 LSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPN 353

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           ++ Y  LI G C+ G M EA  V +K++  G + +   +  L   + +  +   A +I  
Sbjct: 354 VVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWN 413

Query: 566 KWL 568
           K +
Sbjct: 414 KMM 416



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 128/256 (50%), Gaps = 6/256 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I      G +  A  +  KM+  G +P+V+ +  +VN LC+     +A  +I +MS  
Sbjct: 394 ALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTD 453

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  T+N FI G C    ++ A++LF  M   G  PN  T+N ++  L K+  + +A
Sbjct: 454 NCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEA 513

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ-ALALWNDMFQKNIQTDIVAYNV 301
           ++ + E+  ++ G   + V  +TI     F N  KF+ AL L   M    ++ D + YN 
Sbjct: 514 LELVTEM--EEKGMELNLVTYNTIF--GGFCNVGKFEEALKLLGKMLVGGVKPDAITYNT 569

Query: 302 LINGFCLNGDISSAFAYFCQMLKRG-FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           L   +C+ G + +A     ++   G ++P+V  Y +LL  +C Q  ++EA  +   +   
Sbjct: 570 LTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNE 629

Query: 361 GVAPDQISYKTIIQGL 376
           G+  +  ++  +++GL
Sbjct: 630 GICLNAATWNALVRGL 645



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 4/222 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + +++  LC       A  L  KM      P+ +T N  +  LC  G +E A ++  +M 
Sbjct: 427 YTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQME 486

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   SPN  TYN  + G  + N + +AL L + M   G+  N VT+N +    C  G   
Sbjct: 487 QYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFE 546

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT-DIVAY 299
           +A+K LG++L    G    D IT   L  +Y   G    A+ L + +        ++ AY
Sbjct: 547 EALKLLGKMLV---GGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAY 603

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
             L+ G C    +  A  Y  +ML  G   +  T+N L+  L
Sbjct: 604 TSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 11/151 (7%)

Query: 89  ALDLILKEN-----LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRK 143
            LD +LKEN     L+ +  M + G     +E +   +  +    C  GK   AL L  K
Sbjct: 500 VLDGLLKENRIKEALELVTEMEEKG-----MELNLVTYNTIFGGFCNVGKFEEALKLLGK 554

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM-RPSPNCATYNAFITGYCRVN 202
           M+  G  PD +T+N L    C  G ++ A  ++ ++S   +  P  A Y + + G C   
Sbjct: 555 MLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQI 614

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +++A+     M N GI  N  T N LV  L
Sbjct: 615 GVEEAVLYLDKMLNEGICLNAATWNALVRGL 645



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/193 (20%), Positives = 78/193 (40%), Gaps = 1/193 (0%)

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI-WNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           ++  L    DIV A  +  S+          + + ++I+  GR  D+     +   M   
Sbjct: 49  VVMRLRTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLE 108

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+S +   F  +I    R G    A  +   +   G  P V  YN L+ A  +     + 
Sbjct: 109 GISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMI 168

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
             +Y  M R G  P++ TY  L+K  C    +  A ++  ++   G   D + +  +   
Sbjct: 169 EPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISS 228

Query: 551 YRRMKESDKARDI 563
             ++ + ++AR++
Sbjct: 229 MSKLGKVEEAREL 241


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 208/438 (47%), Gaps = 3/438 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++   C  G + TA  +  +M  +G   DV+ +N LV  LC+ G+++ A  ++  M   
Sbjct: 179 SLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRD 238

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY  FI  YCR N +D A  L+  M   G+ P+ VT + LV  LCK G   +A
Sbjct: 239 GVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEA 298

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+   +   A  + +T  +L+D+  K     ++L+L  ++  + +  D++ Y  L
Sbjct: 299 YALFREM---EKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTAL 355

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++  C  G I  A   F   L     P+ +TY  L++ LCK G +D A      + +  +
Sbjct: 356 MDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSI 415

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           +P+ +++ +II GL   G + KA +++  M E+ + P    +  +IDG  +C     A  
Sbjct: 416 SPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALD 475

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   ML  GV  N F  ++L+    + G I  A +L +EM   G+  D   Y  LI    
Sbjct: 476 VYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLF 535

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G++  A ++  E+  + + PD + Y   I   C  G  KEAE    ++Q+ GL  D +
Sbjct: 536 KTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQV 595

Query: 543 PFRILKKRYRRMKESDKA 560
            +  +     R  ++ KA
Sbjct: 596 TYNTMIAAQSREGKTAKA 613



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 226/490 (46%), Gaps = 54/490 (11%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + A++  LC  GKI  A  + R  +     P+ +T+  L++ LCK G+++ A+ V+
Sbjct: 348 DLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVL 407

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM E   SPN  T+++ I G  +   + KA      M   GI PN VT+  ++      
Sbjct: 408 SEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDG---- 463

Query: 237 GLLGDAVKFLGEVLADD-------DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
                + K LG+  A D       +G   +  I  + L++   KNG   +A AL+ +M +
Sbjct: 464 -----SFKCLGQEAALDVYHEMLCEGVEVNKFIVDS-LVNGLKKNGKIEKAEALFREMNE 517

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           + +  D V Y  LI+G    G++ +AF    ++ ++  LPD + YN  +NCLC  GK  E
Sbjct: 518 RGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKE 577

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A  F   +  TG+ PDQ++Y T+I      G   KA + L  M   S+ P    ++ +I 
Sbjct: 578 AESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIV 637

Query: 410 GYGRCGDL-----------SNAFS------------------------IRDLMLSFGVSS 434
           G    G +           S+ FS                        I + M++ G+ +
Sbjct: 638 GLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCA 697

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           ++  +N L+      G    A  + +EM   GI PD  T+N LI      GH+  A   Y
Sbjct: 698 DITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTY 757

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           D+ML  GI+P++ T+  L+ G  + G + E++ V  +++  G+   ++ + IL   Y   
Sbjct: 758 DQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYG-- 815

Query: 555 KESDKARDIH 564
           K+S+K   + 
Sbjct: 816 KQSNKVEAVR 825



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 235/475 (49%), Gaps = 17/475 (3%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D + TM+  G     +E +   +   I + C    +  A  L  +M++KG +PDV+T + 
Sbjct: 230 DMVDTMKRDG-----VEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSA 284

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           LV  LCK G   +A  + REM ++  +PN  TY   I    +    +++L L   + + G
Sbjct: 285 LVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRG 344

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           +  + + +  L+  LCK+G + +A       L+D+    T + +T T+L+D+  K G+  
Sbjct: 345 VVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNH---TPNGVTYTVLIDALCKAGNVD 401

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
            A  + ++M +K+I  ++V ++ +ING    G +  A  Y  +M +RG  P+V+TY T++
Sbjct: 402 GAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVI 461

Query: 339 N----CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           +    CL ++  LD     Y  +   GV  ++    +++ GL  +G I KA      M E
Sbjct: 462 DGSFKCLGQEAALD----VYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNE 517

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           + V+ +   +  +IDG  + G+L  AF +   +    +  +   +N  I      G   +
Sbjct: 518 RGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKE 577

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A S  +EM   G+ PD  TYN +I A    G    AL+L + M R  I P++ITY+ LI 
Sbjct: 578 AESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIV 637

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
           G    G +++A+ +  ++ + G +   +  R + +   + + SD   +IH+ W++
Sbjct: 638 GLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHE-WMM 691



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 218/481 (45%), Gaps = 44/481 (9%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  G +  A  +  +M +K   P+V+T + ++N L K G + KA   +REM 
Sbjct: 387 YTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMK 446

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TY   I G  +    + AL ++  M   G+  N+   + LV+ L K G + 
Sbjct: 447 ERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIE 506

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A     E+   ++     D +  T L+D  FK G+   A  +  ++ +KN+  D V YN
Sbjct: 507 KAEALFREM---NERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYN 563

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           V IN  C+ G    A ++  +M   G  PD +TYNT++    ++GK  +A      + ++
Sbjct: 564 VFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRS 623

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP--------------------- 399
            + P+ I+Y T+I GL   G + KA+  L  M      P                     
Sbjct: 624 SIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLI 683

Query: 400 -EPHIWNVIIDGYGRCGDLS----------------NAFSIRDLMLSFGVSSNVFTFNAL 442
            E H W +     G C D++                 A  + + M   G++ +  TFNAL
Sbjct: 684 LEIHEWMM---NAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNAL 740

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           IL   + G + +AFS   +ML  GI P+V T+N L+G   + G I  +  + +EM +RGI
Sbjct: 741 ILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGI 800

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            P  +TY  L+ G+  + N  EA  ++ ++   G       +  L   + ++    +A++
Sbjct: 801 EPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKE 860

Query: 563 I 563
           +
Sbjct: 861 L 861



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 193/426 (45%), Gaps = 40/426 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVP--DVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           V+  LC  G++  A  L   M++ G +   DV+  N LV+  CK+GD+E A  V   M  
Sbjct: 143 VLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKA 202

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
                +   YN+ + G CR  E+D A  +  TM  +G+ PN VT+ + +   C++  + D
Sbjct: 203 QGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDD 262

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
                                                 A +L+ +M +K +  D+V  + 
Sbjct: 263 --------------------------------------AFSLYEEMVRKGVLPDVVTLSA 284

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L+ G C +G  S A+A F +M K G  P+ +TY  L++ L K  + +E+    G +   G
Sbjct: 285 LVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRG 344

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V  D I Y  ++  LC  G I +A++     L  +  P    + V+ID   + G++  A 
Sbjct: 345 VVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAE 404

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   M    +S NV TF+++I    + G +  A    +EM   GI P+V TY  +I  S
Sbjct: 405 QVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGS 464

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
                   AL +Y EML  G+  +      L+ G    G +++AE +F ++   G+ +DH
Sbjct: 465 FKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDH 524

Query: 542 IPFRIL 547
           + +  L
Sbjct: 525 VNYTTL 530



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 188/417 (45%), Gaps = 5/417 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D+  +  +I  L   G +  A  + +++ +K  +PD + +N  +N LC +G  ++A+  +
Sbjct: 523 DHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFL 582

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P+  TYN  I    R  +  KAL L + M  + I+PN +T++ L+  L + 
Sbjct: 583 EEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEA 642

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMD-SYFKNGDKFQALALWNDMFQKNIQTD 295
           G +  A   L E+     G + + +    +L   S  +  D    +  W  M    +  D
Sbjct: 643 GAVEKAKYLLNEM--SSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEW--MMNAGLCAD 698

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           I  YN L+   C NG    A     +M  RG  PD IT+N L+    K G LD A   Y 
Sbjct: 699 ITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYD 758

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +   G++P+  ++ T++ GL   G I ++   L  M ++ + P    +++++ GYG+  
Sbjct: 759 QMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQS 818

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
           +   A  +   M+  G    V T+NALI   ++ G +  A  L  EM   G+ P   TY+
Sbjct: 819 NKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYD 878

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           +L+     L +     +   +M  +G +P   T + + +     G   EA  +   +
Sbjct: 879 ILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 145/289 (50%), Gaps = 7/289 (2%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           + + +   D V+YNV+++GF   G ++   A   +M KRG   D +T NT+L  LC+ G+
Sbjct: 94  LLRSSESVDTVSYNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTVNTVLVGLCRDGR 152

Query: 347 LDEASHFYGVLSKTGV--APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
           +D A+    V+ + G     D + + +++ G C  GD+  A      M  + V  +   +
Sbjct: 153 VDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGY 212

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           N ++ G  R G++  A  + D M   GV  NV T+   I+   R  ++ DAFSL +EM+ 
Sbjct: 213 NSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVR 272

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK--GHCARGNM 522
            G+ PDV T + L+G  C  G    A  L+ EM + G  P+ +TY  LI       RGN 
Sbjct: 273 KGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGN- 331

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            E+  +  ++ + G+ +D I +  L     +  + D+A+D+ +  L  N
Sbjct: 332 -ESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDN 379


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 233/500 (46%), Gaps = 43/500 (8%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+ M D G     ++ D   +  +I  LC    +  A  + + MI KG  PDV+T+N ++
Sbjct: 222 LQHMIDKG-----VKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTII 276

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           + LCK   +++A+ V++ M +    P+  TYN  I G C+   +D+A  +   M +  ++
Sbjct: 277 DGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVK 336

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P+  T+N L+H     G   + V+ L E+ A        DV+T ++L+D   KNG   +A
Sbjct: 337 PDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARG---LDPDVVTYSLLLDYLCKNGKCTEA 393

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS--------------------------- 313
             ++  M +K I+ ++  Y +L++G+   G I+                           
Sbjct: 394 RKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCA 453

Query: 314 --------SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
                    A   F +M + G  PDV+TY  L++ LCK G++D+A   +  +   GV P+
Sbjct: 454 YAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPN 513

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            + + +++ GLC      KA E    M ++ V P    +N I+      G +  A  + D
Sbjct: 514 SVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLID 573

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   GV  NV ++N LI      G   +A  L   M+  G+ PD+ +Y+ L+   C  G
Sbjct: 574 SMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTG 633

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            I  A  L+ EMLR+G+TP  +TY+ +++G        EA+E++  +   G   D   + 
Sbjct: 634 RIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYN 693

Query: 546 ILKKRYRRMKESDKARDIHQ 565
           I+     +    D+A  I Q
Sbjct: 694 IILNGLCKTNCVDEAFKIFQ 713



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 225/483 (46%), Gaps = 41/483 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKG---TVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +++ LC   ++  AL L   M + G     P+V+T+N +++ LCK   +++A+ V++ M 
Sbjct: 167 LLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMI 226

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +     +  TY+  I G C+   +D+A  +   M + G++P+ VT+N ++  LCK   + 
Sbjct: 227 DKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVD 286

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A   L  ++   D     DV+T   ++D   K     +A  +   M  K+++ DI  YN
Sbjct: 287 RAEGVLQHMI---DKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYN 343

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G+   G+         +M  RG  PDV+TY+ LL+ LCK GK  EA   +  + + 
Sbjct: 344 CLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRK 403

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+   Y  ++ G    G I    + L  M+   + P  +I+N+++  Y +   +  A
Sbjct: 404 GIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEA 463

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             I   M   G+S +V T+  LI A  + G + DA     +M+ DG+ P+   +N L+  
Sbjct: 464 MHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYG 523

Query: 481 SC-----------------------------------NLGHIHLALQLYDEMLRRGITPD 505
            C                                   N G + +A +L D M R G+ P+
Sbjct: 524 LCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPN 583

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           +I+Y  LI GHC  G   EA ++   + ++GL  D I +  L + Y +    D A  + +
Sbjct: 584 VISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFR 643

Query: 566 KWL 568
           + L
Sbjct: 644 EML 646



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 221/439 (50%), Gaps = 11/439 (2%)

Query: 114 LETDYRRHVAVIRDL----CLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           L+T +R +  VI  L    C   ++  A+  L R+M + G +P+V++ N L+  LC    
Sbjct: 117 LKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKR 176

Query: 169 LEKADHVIREMSE---MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
           +E+A  ++  M+E      +PN  TYN  I G C+   +D+A  +   M + G++ + VT
Sbjct: 177 VEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVT 236

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
           ++ ++  LCK   +  A   L  ++   D     DV+T   ++D   K     +A  +  
Sbjct: 237 YSTIIDGLCKAQAVDRAEGVLQHMI---DKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQ 293

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M  K ++ D+V YN +I+G C    +  A      M+ +   PD+ TYN L++     G
Sbjct: 294 HMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTG 353

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           +  E       +   G+ PD ++Y  ++  LC +G   +AR+    M+ K + P   I+ 
Sbjct: 354 EWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYG 413

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
           +++ GY   G +++   + DLM++ G+S N + FN ++ A  +   I +A  +   M   
Sbjct: 414 ILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQH 473

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G+ PDV TY +LI A C LG +  A+  +++M+  G+TP+ + +  L+ G C     ++A
Sbjct: 474 GLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKA 533

Query: 526 EEVFAKIQTLGLAIDHIPF 544
           EE+F ++   G+  + + F
Sbjct: 534 EELFFEMWDQGVRPNVVFF 552



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 230/507 (45%), Gaps = 37/507 (7%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           KE + RL+ M   G     L+ D   +  ++  LC  GK   A  +   MI+KG  P+V 
Sbjct: 356 KEVVRRLEEMYARG-----LDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVT 410

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
            +  L++     G +     ++  M     SPN   +N  +  Y +   +D+A+H+FS M
Sbjct: 411 IYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRM 470

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD--------------------- 253
           + +G+ P+ VT+ IL+ ALCK G + DAV    +++ D                      
Sbjct: 471 SQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRW 530

Query: 254 -----------DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                      D     +V+    +M +    G    A  L + M +  ++ ++++YN L
Sbjct: 531 EKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTL 590

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G CL G    A      M+  G  PD+I+Y+TLL   CK G++D A   +  + + GV
Sbjct: 591 IGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGV 650

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  ++Y TI+QGL       +A+E  L+M++     + + +N+I++G  +   +  AF 
Sbjct: 651 TPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFK 710

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I   + S  +  N+ TF  +I    +GG   DA  L   +   G+ P+V TY +++    
Sbjct: 711 IFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNII 770

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +     L+  M + G TPD +    +I+    RG +  A    +KI  +  +++  
Sbjct: 771 QEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEAS 830

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLL 569
              +L   + R +  + A+ + +K+L 
Sbjct: 831 TTSLLISLFSREEYKNHAKSLPEKYLF 857



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 203/423 (47%), Gaps = 8/423 (1%)

Query: 132 GKIGTALW---LRR--KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           G + T  W   +RR  +M  +G  PDV+T++ L++ LCK G   +A  +   M      P
Sbjct: 348 GYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKP 407

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N   Y   + GY     +     L   M  NGI PN    NI++ A  KK ++ +A+   
Sbjct: 408 NVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIF 467

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
             +        + DV+T  IL+D+  K G    A+  +N M    +  + V +N L+ G 
Sbjct: 468 SRM---SQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGL 524

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C       A   F +M  +G  P+V+ +NT++  LC +G++  A      + + GV P+ 
Sbjct: 525 CTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNV 584

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           ISY T+I G C+ G   +A + L  M+   + P+   ++ ++ GY + G + NA+ +   
Sbjct: 585 ISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFRE 644

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           ML  GV+    T++ ++          +A  L   M+  G   D++TYN+++   C    
Sbjct: 645 MLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNC 704

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A +++  +  + + P+IIT+T +I      G  K+A ++FA I + GL  + + + I
Sbjct: 705 VDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCI 764

Query: 547 LKK 549
           + K
Sbjct: 765 MMK 767



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 193/411 (46%), Gaps = 1/411 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH- 209
           PD+ T++ L    C++G +E        + +     N    N  + G C    +D+A+  
Sbjct: 88  PDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDI 147

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L   M   G  PN V+ N L+  LC +  + +A++ L  +  D  G  T +V+T   ++D
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIID 207

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K     +A  +   M  K ++ D+V Y+ +I+G C    +  A      M+ +G  P
Sbjct: 208 GLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 267

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           DV+TYNT+++ LCK   +D A      +   GV PD ++Y TII GLC    + +A   L
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVL 327

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M++K V P+   +N +I GY   G+        + M + G+  +V T++ L+    + 
Sbjct: 328 QHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKN 387

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G   +A  +   M+  GI P+V  Y +L+      G I     L D M+  GI+P+   +
Sbjct: 388 GKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIF 447

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
             ++  +  +  + EA  +F+++   GL+ D + + IL     ++   D A
Sbjct: 448 NIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA 498



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 206/454 (45%), Gaps = 13/454 (2%)

Query: 124 VIRDLCLGGKIGT--ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           VI D    G +G   AL L  +++       V   N+L+N + +      ++  +   + 
Sbjct: 18  VIADRARSGSLGIDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNR 77

Query: 182 M------RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           M      +  P+  TY+     +CR+  ++     F  +   G R N V  N L++ LC 
Sbjct: 78  MARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCD 137

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK---NI 292
              + +A+  L   + +       +V++   L+          +AL L + M +    N 
Sbjct: 138 AKRVDEAMDILLRRMPE--FGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNC 195

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             ++V YN +I+G C    +  A      M+ +G   DV+TY+T+++ LCK   +D A  
Sbjct: 196 TPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEG 255

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               +   GV PD ++Y TII GLC    + +A   L  M++K V P+   +N IIDG  
Sbjct: 256 VLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLC 315

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +   +  A  +   M+   V  ++ T+N LI      G   +     +EM   G+ PDV 
Sbjct: 316 KAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVV 375

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY+LL+   C  G    A +++  M+R+GI P++  Y  L+ G+ ARG + +  ++   +
Sbjct: 376 TYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLM 435

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
              G++ ++  F I+   Y +    D+A  I  +
Sbjct: 436 VANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSR 469


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 223/444 (50%), Gaps = 10/444 (2%)

Query: 88  NALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           + LD +L EN  ++  M      R   E +   +  +++ LC   K+  A  L  +M  K
Sbjct: 150 HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 209

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P+ +++  +++ +C++G +++     R+++E R  P  + YNA I G C+  +    
Sbjct: 210 GCCPNAVSYTTVISSMCEVGMVKEG----RQLAE-RFEPVVSVYNALINGLCKERDYKGG 264

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + L S M   GI PN ++++ L++ L   G +  A   L ++L         ++ T + L
Sbjct: 265 VELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRG---CHPNIHTLSSL 321

Query: 268 MDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +   F  G  F AL +WN M +   +Q ++VAYN L+ GFC +G+I  A + F  M + G
Sbjct: 322 VKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIG 381

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P++ TY +L+N   K+G L+ A + +  +  +G  P+ + Y ++++ LC H    +A 
Sbjct: 382 CSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAE 441

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILA 445
             +  M +++  P    +N  I G    G L  A  + R +   +    N+ T+N L+  
Sbjct: 442 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDG 501

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             +   I +A+ L +E+ + G+     TYN L+  SCN G   +ALQL  +M+  G +PD
Sbjct: 502 LAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPD 561

Query: 506 IITYTELIKGHCARGNMKEAEEVF 529
            IT   +I  +C +G  + A ++ 
Sbjct: 562 EITMNMIILAYCKQGKAERAVQML 585



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 200/450 (44%), Gaps = 45/450 (10%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P V  +N++++ L     ++    V R+M      PN  TYN  +   C+ N++D A
Sbjct: 140 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 199

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M+N G  PN V++  ++ ++C+ G++ +     G  LA+   +    V     L
Sbjct: 200 KKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKE-----GRQLAE---RFEPVVSVYNAL 251

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           ++   K  D    + L ++M +K I  ++++Y+ LIN    +G I  AF+   QMLKRG 
Sbjct: 252 INGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGC 311

Query: 328 LPDVITYNTLLN-CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            P++ T ++L+  C  +    D    +  ++   G+ P+ ++Y T++QG C HG+I KA 
Sbjct: 312 HPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAV 371

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
              L M E    P    +  +I+G+ + G L  A  I + ML+ G   NV  + +++ A 
Sbjct: 372 SVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEAL 431

Query: 447 TRGGSIFDAFSLKKEM--------------------------LLDGIF----------PD 470
            R     +A SL + M                            + +F          P+
Sbjct: 432 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPN 491

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           + TYN L+        I  A  L  E+  RG+     TY  L+ G C  G    A ++  
Sbjct: 492 IVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVG 551

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           K+   G + D I   ++   Y +  ++++A
Sbjct: 552 KMMVNGKSPDEITMNMIILAYCKQGKAERA 581



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 180/395 (45%), Gaps = 38/395 (9%)

Query: 207 ALHLFSTMAN-NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           ALH F ++AN N  +   +T  +++  L   G + D+V++L + +       + D+  S 
Sbjct: 58  ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQV-DSVQYLLQQMKLQGFHCSEDLFISV 116

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           I    Y + G   +A+ ++  + +      +  YN +++       I   +  +  M + 
Sbjct: 117 I--SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD 174

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           GF P+V TYN LL  LCK  K+D A      +S  G  P+ +SY T+I  +C  G + + 
Sbjct: 175 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEG 234

Query: 386 R------------------------------EFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
           R                              E +  M+EK + P    ++ +I+     G
Sbjct: 235 RQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSG 294

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTY 474
            +  AFS+   ML  G   N+ T ++L+      G+ FDA  +  +M+   G+ P+V  Y
Sbjct: 295 QIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAY 354

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N L+   C+ G+I  A+ ++  M   G +P+I TY  LI G   RG+++ A  ++ K+ T
Sbjct: 355 NTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLT 414

Query: 535 LGLAIDHIPFRILKK---RYRRMKESDKARDIHQK 566
            G   + + +  + +   R+ + KE++   +I  K
Sbjct: 415 SGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSK 449



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 120/266 (45%), Gaps = 4/266 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ +   +  +++  C  G I  A+ +   M + G  P++ T+  L+N   K G LE A 
Sbjct: 347 LQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAV 406

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           ++  +M      PN   Y + +   CR ++  +A  L   M+     P+  T N  +  L
Sbjct: 407 YIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 466

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C  G L  A K   ++  +   +   +++T   L+D   K     +A  L  ++F + ++
Sbjct: 467 CDAGRLDWAEKVFRQM--EQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 524

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
                YN L++G C  G    A     +M+  G  PD IT N ++   CKQGK + A   
Sbjct: 525 WSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQM 584

Query: 354 YGVLS--KTGVAPDQISYKTIIQGLC 377
             ++S  +    PD ISY  +I GLC
Sbjct: 585 LDLVSCGRRKWRPDVISYTNVIWGLC 610



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 104/212 (49%), Gaps = 6/212 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + +++  LC   K   A  L   M ++   P V T N  +  LC  G L+ A+ V R+M 
Sbjct: 424 YTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 483

Query: 181 EM-RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
           +  R  PN  TYN  + G  + N +++A  L   +   G+  +  T+N L+H  C  GL 
Sbjct: 484 QQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLP 543

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN--DMFQKNIQTDIV 297
           G A++ +G+++ +  GK + D IT  +++ +Y K G   +A+ + +     ++  + D++
Sbjct: 544 GIALQLVGKMMVN--GK-SPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVI 600

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
           +Y  +I G C +         F +M+    +P
Sbjct: 601 SYTNVIWGLCRSNCREDGVILFERMISERIIP 632


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 204/439 (46%), Gaps = 38/439 (8%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+ K   PDV+    L+       +++KA  V+  + E    P+   YNA I+G+C+ N 
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGIL-EKHGKPDVFAYNAVISGFCKANR 59

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           ++ A  +   M   G  P+ VTHNI++   C KG +  A+K   E+L D++ K T  +IT
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPT--LIT 117

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            TIL+++Y   G   +AL L ++M  + ++ D   YNV+  G C  G +  AF +   + 
Sbjct: 118 YTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLN 177

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            RG  PDVITYN LL  L  QGK DE   +   +   G  P+ ++Y  +I  LC  G I 
Sbjct: 178 SRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIE 237

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML--------------- 428
           ++   +  M EK + P+ + ++ +I  + R G L  A    D M+               
Sbjct: 238 ESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIM 297

Query: 429 --------------------SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
                                 G   NV ++N ++ A    G  + A  +  +ML  GI 
Sbjct: 298 AALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGID 357

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PDV TYN LI   C  G +  A+ L  +ML     P+I++Y  ++ G C    + +A EV
Sbjct: 358 PDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEV 417

Query: 529 FAKIQTLGLAIDHIPFRIL 547
            A +   G   +   + +L
Sbjct: 418 LAAMIENGCQPNETTYTLL 436



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 212/451 (47%), Gaps = 5/451 (1%)

Query: 102 KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           K  R  G +    + D   + AVI   C   +I +A  +  +M +KG  PDV+THN ++ 
Sbjct: 28  KATRVMGILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIG 87

Query: 162 ELCKIGDLEKADHVIREM-SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
             C  G ++ A  V  E+  +    P   TY   I  Y     +D+AL L   M + G+ 
Sbjct: 88  TFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLE 147

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P+  T+N++   LCK+G +  A +F+  +   +      DVIT  IL+ +    G   + 
Sbjct: 148 PDTFTYNVITRGLCKEGKVDRAFEFVRTL---NSRGCKPDVITYNILLRALLNQGKWDEG 204

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
               +++F +  + ++V Y++LI+  C +G I  +      M ++G  PD   Y+ L+  
Sbjct: 205 EKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAA 264

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
            C++GKLD A  F   +   G  PD ++Y TI+  LC +G+   A E    + E    P 
Sbjct: 265 FCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPN 324

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +N ++      GD   A  +   MLS G+  +V T+N+LI    R G + +A  L  
Sbjct: 325 VSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLA 384

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           +ML     P++ +Y  ++   C    I  A+++   M+  G  P+  TYT LI+G    G
Sbjct: 385 DMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSG 444

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +  +A E+   +  +  AI    F+ L K +
Sbjct: 445 SRTQAMELANSLYIMN-AISEDSFKRLNKTF 474



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 146/308 (47%), Gaps = 2/308 (0%)

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DVI  T L+  +F + +  +A  +   + +K+ + D+ AYN +I+GFC    I SA    
Sbjct: 9   DVILCTKLIKGFFNSRNIDKATRVMG-ILEKHGKPDVFAYNAVISGFCKANRIESAKTVL 67

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEA-SHFYGVLSKTGVAPDQISYKTIIQGLCI 378
            +M ++GF PDV+T+N ++   C +GK+D A   F  +L      P  I+Y  +I+   +
Sbjct: 68  DRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYIL 127

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G I +A + L  ML + + P+   +NVI  G  + G +  AF     + S G   +V T
Sbjct: 128 EGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVIT 187

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N L+ A    G   +      E+   G  P+V TY++LI + C  G I  ++ L   M 
Sbjct: 188 YNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMK 247

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
            +G+TPD   Y  LI   C  G +  A E    +   G   D + +  +     +    D
Sbjct: 248 EKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGD 307

Query: 559 KARDIHQK 566
            A +I  K
Sbjct: 308 HAVEIFGK 315


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 222/436 (50%), Gaps = 4/436 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           C    +G A  +  KM ++ +  P+ +T++ L++ LC+ G LE+A  + +EM E    P+
Sbjct: 174 CRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPS 233

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY   I   C +   DKA+ +   MA     PN  T+ IL+  LC++G + +A     
Sbjct: 234 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFR 293

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           ++L          +IT   L++ Y K G    A  L + M + N + +I  YN L+ G C
Sbjct: 294 KMLKHG---LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 350

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
                  AF    +++  G LPD +TYN L++  CK+G+L+ A + +  ++  G+ PD  
Sbjct: 351 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 410

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           ++  +I GLC  G + +A   L SM++K +  +   +  +IDG+ + G   +   + + M
Sbjct: 411 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 470

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +     +   TFN  + A  +   + +A ++  +M+  G+ P V T+ +LI   C  G  
Sbjct: 471 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 530

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            L+L++ + M + G +P++ TYT +I G C  G ++EAE +   + + G++ +H  + +L
Sbjct: 531 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 590

Query: 548 KKRYRRMKESDKARDI 563
            K + +    D+A  I
Sbjct: 591 VKAHVKAGRLDRAFQI 606



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 202/409 (49%), Gaps = 3/409 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++  A  L+++M++KG  P   T+  L+   C IG  +KA  ++ EM+   
Sbjct: 205 LIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 264

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY   I   CR  ++++A  +F  M  +G+ P  +T N L++  CK+G +  A 
Sbjct: 265 CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAF 324

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L  +   + G    ++ T   LM+   +    ++A  L   +    +  D V YN+L+
Sbjct: 325 QLLSVM---EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILV 381

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GFC  G ++ AF  F  M   G  PD  T+  L++ LCK G+L++A+   G + K G++
Sbjct: 382 DGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGIS 441

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D++++  +I G C  G          +M+E   +   H +N  +D  G+   L+ A ++
Sbjct: 442 LDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAM 501

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+ +G+  +V T   LI    R G    +  + + M   G  P+V+TY ++I   CN
Sbjct: 502 LGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCN 561

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            G +  A  +   M   G++P+  TY  L+K H   G +  A ++ + +
Sbjct: 562 NGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 610



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 209/457 (45%), Gaps = 41/457 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  GKI  A  + RKM++ G  P ++T N L+N  CK G +  A  ++  M 
Sbjct: 272 YTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVME 331

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  TYN  + G CRV++  KA  L   + +NG+ P+RVT+NILV   CK+G L 
Sbjct: 332 KGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLN 391

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A      +   +      D  T T L+D   K G   QA  +   M +K I  D V + 
Sbjct: 392 MAFNIFNSM---NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT 448

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G C  G        F  M++   L    T+N  L+ L K  KL+EA+   G + K 
Sbjct: 449 ALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKY 508

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P  +++  +I+G C  G+   + + L  M +    P  + + +II+G    G +  A
Sbjct: 509 GLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA 568

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL--- 477
            +I   M SFGVS N FT+  L+ A  + G +  AF +   M+ +G  P+   Y+ L   
Sbjct: 569 ETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG 628

Query: 478 -------IGA---------------------SCNLGHIHL------ALQLYDEMLRRGIT 503
                  IGA                     +C   H+        AL++ DE+ + G+ 
Sbjct: 629 FVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGV- 687

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           P    Y  L+ G C  G + EA+++   +   GL  D
Sbjct: 688 PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD 724



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 187/386 (48%), Gaps = 7/386 (1%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M+E+    +   Y+  +    ++N    A  ++  M N G     + +  +V+ALCK G 
Sbjct: 84  MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 143

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF-QKNIQTDIV 297
           +  A  F  +VL    G  T  V TS +L +   +  D  +A  ++  M  +++ + + V
Sbjct: 144 VQAAEMFCCKVLRLGFGLDTH-VCTSLVLANC--RRDDLGEAFRVFEKMSKEESCRPNSV 200

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            Y++LI+G C  G +  AF    +M+++G  P   TY  L+   C  G  D+A      +
Sbjct: 201 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 260

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
           +     P+  +Y  +I  LC  G I +A      ML+  + P    +N +I+GY + G +
Sbjct: 261 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 320

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
            +AF +  +M       N+ T+N L+    R    + AF L + ++ +G+ PD  TYN+L
Sbjct: 321 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 380

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           +   C  G +++A  +++ M   G+ PD  T+T LI G C  G +++A  +   +   G+
Sbjct: 381 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 440

Query: 538 AIDHIPFRILKKRYRRMKESDKARDI 563
           ++D + F  L   + ++    KA+D+
Sbjct: 441 SLDEVTFTALIDGHCKI---GKAKDV 463



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 203/453 (44%), Gaps = 42/453 (9%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           + R +  ++  LC   K   A  L R+++  G +PD +T+N LV+  CK G L  A ++ 
Sbjct: 338 NIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIF 397

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M+     P+  T+ A I G C++  L++A  +  +M   GI  + VT   L+   CK 
Sbjct: 398 NSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKI 457

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G   D V FL E + ++    T+   T    +D+  K+    +A A+   M +  +   +
Sbjct: 458 GKAKD-VCFLFENMVENRCLTTAH--TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 514

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V + +LI G C  G+ + +     +M + G  P+V TY  ++N LC  G+++EA      
Sbjct: 515 VTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 574

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG---- 412
           +S  GV+P+  +Y  +++     G + +A + + +M++    P  HI++ ++ G+     
Sbjct: 575 MSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT 634

Query: 413 ---------------------------------RCGDLSNAFSIRDLMLSFGVSSNVFTF 439
                                            R  D+ +A  IRD +   GV +    +
Sbjct: 635 AIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL-Y 693

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N L++   + G I +A  L ++M+  G+FPD    + +I   C        L+    +L 
Sbjct: 694 NFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEFMKLVLD 752

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
               P   +Y  +I G    G ++EA+++ + +
Sbjct: 753 NKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 785



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 105/248 (42%), Gaps = 36/248 (14%)

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M + GF      Y+TLL CL K      A   Y  +   G     I Y+T++  LC +G 
Sbjct: 84  MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNG- 142

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
            V+A E                                 F  + L L FG+ ++V T  +
Sbjct: 143 FVQAAEM--------------------------------FCCKVLRLGFGLDTHVCT--S 168

Query: 442 LILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           L+LA  R   + +AF + ++M  +    P+  TY++LI   C  G +  A QL  EM+ +
Sbjct: 169 LVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 228

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G  P   TYT LIK  C  G   +A ++  ++ T     +   + IL  R  R  + ++A
Sbjct: 229 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 288

Query: 561 RDIHQKWL 568
             + +K L
Sbjct: 289 NGVFRKML 296



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 1/109 (0%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R  I+K  VP    +N+LV  LCK G + +AD + ++M +    P+ A  ++ I  YC+ 
Sbjct: 679 RDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKT 737

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
            + D  L     + +N   P+  ++  ++H L  +G + +A K + +++
Sbjct: 738 CKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 786


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 212/410 (51%), Gaps = 4/410 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G+   A  L  +M  KG  P+   +  L++  C+ G++  A  +  +M+++ 
Sbjct: 333 MIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 392

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   YN+ I G  +V  ++++   F+ M   G+ PN  T++ L+H   K G L  A 
Sbjct: 393 VLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAE 452

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + +  +L  D G   +DVI    L++SYFK+ D  +  + +  M  + +  D   Y +LI
Sbjct: 453 QLVQRML--DTGLKPNDVIYID-LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 509

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +    +G++ +AF    ++ K G +PDV  Y++L++ LCK    ++A      +SK GV 
Sbjct: 510 HNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 569

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ + Y  +I GLC  GDI  AR    S+L K +VP    +  +IDG  + GD+SNAF +
Sbjct: 570 PNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYL 629

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + ML+ G++ + F ++ L    +  G +  A  L +EM L G    + ++N L+   C 
Sbjct: 630 YNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCK 688

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            G +   L+L   ++ RG+ P+ +T   +I G    G + E   +F ++Q
Sbjct: 689 RGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQ 738



 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 233/504 (46%), Gaps = 43/504 (8%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  MR+ G   C L T    +  +I  LC  G +  A   ++ M   G VPD  T+  L+
Sbjct: 140 LVEMRERG---CGLNT--VTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALI 194

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           N LCK     +A  ++ EMS     PN   Y   I G+ R    D+A  +   M   G++
Sbjct: 195 NGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ 254

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLAD---------------------------- 252
           PN++T++ LV  LCK G +  A   L +++ D                            
Sbjct: 255 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRL 314

Query: 253 ----DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
               ++   + +V T +I++    ++G+  +A  L  +M  K ++ +   Y  LI+G+C 
Sbjct: 315 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 374

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G++S A   F +M K   LPD+  YN+L+  L K G+++E++ ++  + + G+ P++ +
Sbjct: 375 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 434

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I G   +GD+  A + +  ML+  + P   I+  +++ Y +  D+    S    ML
Sbjct: 435 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 494

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             GV  +   +  LI   +  G++  AF +  E+  +G  PDV  Y+ LI   C      
Sbjct: 495 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADRE 554

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A  + DEM ++G+ P+I+ Y  LI G C  G++  A  VF  I   GL  + + +  L 
Sbjct: 555 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL- 613

Query: 549 KRYRRMKESDKARDIHQKWLLRNK 572
                +  S K  DI   + L N+
Sbjct: 614 -----IDGSCKVGDISNAFYLYNE 632



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 212/439 (48%), Gaps = 3/439 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G    A  + ++M+  G  P+ +T++ LV  LCK+G +++A  ++++M      P+  TY
Sbjct: 236 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 295

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I G+ R +    A  L S M N GI PN  T++I++H LC+ G    A   L E+  
Sbjct: 296 NLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT 355

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   +      L+  Y + G+   A  +++ M + N+  D+  YN LI G    G 
Sbjct: 356 KG---LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 412

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  +  YF QM +RG LP+  TY+ L++   K G L+ A      +  TG+ P+ + Y  
Sbjct: 413 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 472

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +++      DI K      SML++ V+ +  I+ ++I      G++  AF +   +   G
Sbjct: 473 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNG 532

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              +V  +++LI    +      AF +  EM   G+ P++  YN LI   C  G I  A 
Sbjct: 533 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 592

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            +++ +L +G+ P+ +TYT LI G C  G++  A  ++ ++   G+  D   + +L    
Sbjct: 593 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 652

Query: 552 RRMKESDKARDIHQKWLLR 570
               + ++A  + ++  LR
Sbjct: 653 SSAGDLEQAMFLIEEMFLR 671



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 209/444 (47%), Gaps = 8/444 (1%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MRD G     L    R   A+++DL     +     +R  M+  G  PDV T++ L+   
Sbjct: 73  MRDRG-----LAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAY 127

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           CK+ + + A  V+ EM E     N  TYN  I G CR   +++A      M + G+ P+ 
Sbjct: 128 CKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDG 187

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
            T+  L++ LCK     +A   L E+      +   +V+    L+D + + G+  +A  +
Sbjct: 188 FTYGALINGLCKSRRSNEAKALLDEMSC---AELKPNVVVYANLIDGFMREGNADEAFKM 244

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
             +M    +Q + + Y+ L+ G C  G +  A     QM++    PD ITYN ++    +
Sbjct: 245 IKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFR 304

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
                +A      +   G++P+  +Y  +I GLC  G+  KA + L  M  K + P   +
Sbjct: 305 HHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFV 364

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +  +I GY R G++S A  I D M    V  +++ +N+LI   ++ G + ++     +M 
Sbjct: 365 YAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ 424

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             G+ P+ FTY+ LI      G +  A QL   ML  G+ P+ + Y +L++ +    +++
Sbjct: 425 ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIE 484

Query: 524 EAEEVFAKIQTLGLAIDHIPFRIL 547
           +    F  +   G+ +D+  + IL
Sbjct: 485 KVSSTFKSMLDQGVMLDNRIYGIL 508



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 199/418 (47%), Gaps = 5/418 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P VL  + LV+   K G ++ A  V+  M +   +P+    NA +    R + +     +
Sbjct: 47  PAVL--DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKV 104

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   GI P+  T++ L+ A CK      A K L E+     G  T   +T  +L+  
Sbjct: 105 REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNT---VTYNVLIAG 161

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             ++G   +A     DM    +  D   Y  LING C +   + A A   +M      P+
Sbjct: 162 LCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPN 221

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+ Y  L++   ++G  DEA      +   GV P++I+Y  +++GLC  G + +A   L 
Sbjct: 222 VVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLK 281

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M+  S  P+   +N+II+G+ R  +  +AF +   M + G+S NV+T++ +I    + G
Sbjct: 282 QMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSG 341

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
               A  L +EM   G+ P+ F Y  LI   C  G++ LA +++D+M +  + PD+  Y 
Sbjct: 342 EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYN 401

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            LI G    G ++E+ + FA++Q  GL  +   +  L   Y +  + + A  + Q+ L
Sbjct: 402 SLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 459



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 189/407 (46%), Gaps = 44/407 (10%)

Query: 75  KDSDNEGNPQAVFNALDLILKEN----LDRLKTM---RDTGPVRCTLET--------DYR 119
           K+ D E   Q V   LD  LK N    +D L++     D   V  T ++        D R
Sbjct: 444 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNR 503

Query: 120 RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
            +  +I +L   G +  A  +  ++ + G+VPDV  ++ L++ LCK  D EKA  ++ EM
Sbjct: 504 IYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 563

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
           S+    PN   YNA I G C+  ++  A ++F+++   G+ PN VT+  L+   CK G +
Sbjct: 564 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDI 623

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +A     E+LA      T D    ++L       GD  QA+ L  +MF +     I ++
Sbjct: 624 SNAFYLYNEMLATG---ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSF 679

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA-SHFYGVLS 358
           N L++GFC  G +         ++ RG +P+ +T   +++ L + GKL E  + F  +  
Sbjct: 680 NNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQ 739

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREF---LLSMLEKSVVPEPHIWNVIIDGYGRCG 415
           KT  +                     AR F    + M+ +  +P   + ++I D + + G
Sbjct: 740 KTSES--------------------AARHFSSLFMDMINQGKIPLDVVDDMIRD-HCKEG 778

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
           +L  A  +RD++++        ++ A++    R G + +A +L KEM
Sbjct: 779 NLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 825



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/298 (21%), Positives = 122/298 (40%), Gaps = 57/298 (19%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + ++I  LC       A  +  +M +KG  P+++ +N L++ LCK GD+  A +V 
Sbjct: 536 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 595

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             +      PNC TY + I G C+V ++  A +L++ M   GI P+   +++L       
Sbjct: 596 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 655

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A+  + E+      +  + + +   L+D + K G   + L L + +  + +  + 
Sbjct: 656 GDLEQAMFLIEEMFL----RGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNA 711

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQ-------------------MLKRGFLP-------- 329
           +    +I+G    G +S     F +                   M+ +G +P        
Sbjct: 712 LTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMI 771

Query: 330 ----------------DVI----------TYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
                           DVI          +Y  +++ LC++GKL EA +    + K G
Sbjct: 772 RDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 244/503 (48%), Gaps = 48/503 (9%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLG--GK---IGTALWLRRKMIQKGTVPDVLT 155
            + ++D+GP       +   +  ++   C G  GK   I  A  +  +M   G  P V+T
Sbjct: 236 FEELKDSGP-----SPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVT 290

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +   ++ LC+ G +E A  +IR++       N   YNA I  +CR  EL +A  L   M 
Sbjct: 291 YGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMR 350

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           ++GI P   +++IL+  LCKKG +  A+  + E++  +       ++T + L D   K+G
Sbjct: 351 SHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSN---VKPSLVTYSSLFDGLCKSG 407

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
               +L++++++  +  + D+++YN LINGF L  D+ SA     +M   G +P+  T+N
Sbjct: 408 LTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFN 467

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGV--------------------------------- 362
            L++  CK+ +LD+A   + ++ K GV                                 
Sbjct: 468 RLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDL 527

Query: 363 --APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
              P+  +Y  +I+ LC      KA E L  ML+ +V P    +N +IDGY +  + + A
Sbjct: 528 GIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKA 587

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +   ML  G+  ++ T+  LI   +    + +A+ L KEM+  G+ PD   +  +I  
Sbjct: 588 LLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAG 647

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C +G +  A  LY+EM + G +P+++TYT LI G+     M +A+ +F K++   +  D
Sbjct: 648 FCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPD 707

Query: 541 HIPFRILKKRYRRMKESDKARDI 563
            + +  L   Y+ +  SD+ R++
Sbjct: 708 GLTYTALIFGYQSLGYSDRVREM 730



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/466 (24%), Positives = 185/466 (39%), Gaps = 74/466 (15%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
            ++  N L+    +   L  A  V  +        N  + N  +  +   N+ +    LF
Sbjct: 177 SIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLF 236

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG--EVLADDDGKATSDVITS----- 264
             + ++G  PN  T+ I+++  C KG  G  +  +   EVL + +    S  + +     
Sbjct: 237 EELKDSGPSPNVFTYTIMMNYYC-KGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYI 295

Query: 265 -------------------------------TILMDSYFKNGDKFQALALWNDMFQKNIQ 293
                                            ++  + +NG+  +A  L  DM    I 
Sbjct: 296 HGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGIS 355

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
               +Y++LI+G C  G +  A     +M++    P ++TY++L + LCK G  + +   
Sbjct: 356 PTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSM 415

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  L   G   D ISY T+I G  +  D+  A + +  M     VP    +N +I G+ +
Sbjct: 416 FHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCK 475

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              L  A  +  +ML  GV  N+FT N +     R G  ++A  L  E+   GI P+ +T
Sbjct: 476 RQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYT 535

Query: 474 YNLLIGASCNLGH--------------------IHL---------------ALQLYDEML 498
           YN++I   C                        IH                AL LY +ML
Sbjct: 536 YNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKML 595

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           + GI P I+TYT LI     R  M+EA  +F ++   GL  D I F
Sbjct: 596 KVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIF 641



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 171/378 (45%), Gaps = 10/378 (2%)

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I  +   N L  A  +F      G+  N ++ N L++   +     +  +F+  +  
Sbjct: 182 NVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAE----ANQTEFIRSLFE 237

Query: 252 D-DDGKATSDVITSTILMD-----SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           +  D   + +V T TI+M+     S+ KN D  +A  +  +M        +V Y   I+G
Sbjct: 238 ELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHG 297

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C  G +  A      +  R    +   YN +++  C+ G+L EA      +   G++P 
Sbjct: 298 LCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPT 357

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
             SY  +I GLC  G + KA + +  M++ +V P    ++ + DG  + G    + S+  
Sbjct: 358 AYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFH 417

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            + + G   +V ++N LI        +  A  L  EM ++G  P+ FT+N LI   C   
Sbjct: 418 NLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQ 477

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  AL+++  ML+ G+  +I T   +       G+  EA ++  ++Q LG+  +   + 
Sbjct: 478 RLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYN 537

Query: 546 ILKKRYRRMKESDKARDI 563
           I+ K   + ++++KA ++
Sbjct: 538 IVIKWLCKEQKTEKAWEV 555



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 150/348 (43%), Gaps = 29/348 (8%)

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           + F  ++ +G   +     I++H L   GL  +   FL +++                  
Sbjct: 107 NFFKAVSFHGFSHSIYAFKIIIHVLASAGLQMEVQIFLRDII------------------ 148

Query: 269 DSYFK--NGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            SY+K  N D  +  +   D  Q  ++   I+  NVLI  F  N  +  A   F Q  + 
Sbjct: 149 -SYYKEVNLDVSELFSTLLDSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRF 207

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG----- 380
           G   ++++ N LLNC  +  + +     +  L  +G +P+  +Y  ++   C        
Sbjct: 208 GLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNI 267

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS-IRDLMLSFGVSSNVFTF 439
           DIVKA E L  M      P    +   I G  R G +  A   IRDL +      N + +
Sbjct: 268 DIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIR-NQPLNSYCY 326

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           NA+I    R G + +AF L ++M   GI P  ++Y++LI   C  G +  AL L +EM++
Sbjct: 327 NAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQ 386

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             + P ++TY+ L  G C  G  + +  +F  +   G   D I +  L
Sbjct: 387 SNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTL 434


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 221/436 (50%), Gaps = 4/436 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           C    +G A  +  KM ++    P+ +T++ L++ LC+ G LE+A  + +EM E    P+
Sbjct: 217 CRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPS 276

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY   I   C +   DKA+ +   MA     PN  T+ IL+  LC++G + +A     
Sbjct: 277 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFR 336

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           ++L          +IT   L++ Y K G    A  L + M + N + +I  YN L+ G C
Sbjct: 337 KMLKHG---LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 393

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
                  AF    +++  G LPD +TYN L++  CK+G+L+ A + +  ++  G+ PD  
Sbjct: 394 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 453

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           ++  +I GLC  G + +A   L SM++K +  +   +  +IDG+ + G   +   + + M
Sbjct: 454 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 513

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +     +   TFN  + A  +   + +A ++  +M+  G+ P V T+ +LI   C  G  
Sbjct: 514 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 573

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            L+L++ + M + G +P++ TYT +I G C  G ++EAE +   + + G++ +H  + +L
Sbjct: 574 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 633

Query: 548 KKRYRRMKESDKARDI 563
            K + +    D+A  I
Sbjct: 634 VKAHVKAGRLDRAFQI 649



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 202/409 (49%), Gaps = 3/409 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++  A  L+++M++KG  P   T+  L+   C IG  +KA  ++ EM+   
Sbjct: 248 LIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 307

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY   I   CR  ++++A  +F  M  +G+ P  +T N L++  CK+G +  A 
Sbjct: 308 CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAF 367

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L  +   + G    ++ T   LM+   +    ++A  L   +    +  D V YN+L+
Sbjct: 368 QLLSVM---EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILV 424

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GFC  G ++ AF  F  M   G  PD  T+  L++ LCK G+L++A+   G + K G++
Sbjct: 425 DGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGIS 484

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D++++  +I G C  G          +M+E   +   H +N  +D  G+   L+ A ++
Sbjct: 485 LDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAM 544

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+ +G+  +V T   LI    R G    +  + + M   G  P+V+TY ++I   CN
Sbjct: 545 LGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCN 604

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            G +  A  +   M   G++P+  TY  L+K H   G +  A ++ + +
Sbjct: 605 NGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 653



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 209/457 (45%), Gaps = 41/457 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  GKI  A  + RKM++ G  P ++T N L+N  CK G +  A  ++  M 
Sbjct: 315 YTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVME 374

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  TYN  + G CRV++  KA  L   + +NG+ P+RVT+NILV   CK+G L 
Sbjct: 375 KGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLN 434

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A      +   +      D  T T L+D   K G   QA  +   M +K I  D V + 
Sbjct: 435 MAFNIFNSM---NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT 491

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G C  G        F  M++   L    T+N  L+ L K  KL+EA+   G + K 
Sbjct: 492 ALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKY 551

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P  +++  +I+G C  G+   + + L  M +    P  + + +II+G    G +  A
Sbjct: 552 GLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA 611

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL--- 477
            +I   M SFGVS N FT+  L+ A  + G +  AF +   M+ +G  P+   Y+ L   
Sbjct: 612 ETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG 671

Query: 478 -------IGA---------------------SCNLGHIHL------ALQLYDEMLRRGIT 503
                  IGA                     +C   H+        AL++ DE+ + G+ 
Sbjct: 672 FVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGV- 730

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           P    Y  L+ G C  G + EA+++   +   GL  D
Sbjct: 731 PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD 767



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 187/386 (48%), Gaps = 7/386 (1%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M+E+    +   Y+  +    ++N    A  ++  M N G     + +  +V+ALCK G 
Sbjct: 127 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 186

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF-QKNIQTDIV 297
           +  A  F  +VL    G  T  V TS +L +   +  D  +A  ++  M  ++N + + V
Sbjct: 187 VQAAEMFCCKVLRLGFGLDTH-VCTSLVLANC--RRDDLGEAFRVFEKMSKEENCRPNSV 243

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            Y++LI+G C  G +  AF    +M+++G  P   TY  L+   C  G  D+A      +
Sbjct: 244 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 303

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
           +     P+  +Y  +I  LC  G I +A      ML+  + P    +N +I+GY + G +
Sbjct: 304 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 363

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
            +AF +  +M       N+ T+N L+    R    + AF L + ++ +G+ PD  TYN+L
Sbjct: 364 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 423

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           +   C  G +++A  +++ M   G+ PD  T+T LI G C  G +++A  +   +   G+
Sbjct: 424 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 483

Query: 538 AIDHIPFRILKKRYRRMKESDKARDI 563
           ++D + F  L   + ++    KA+D+
Sbjct: 484 SLDEVTFTALIDGHCKI---GKAKDV 506



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 203/453 (44%), Gaps = 42/453 (9%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           + R +  ++  LC   K   A  L R+++  G +PD +T+N LV+  CK G L  A ++ 
Sbjct: 381 NIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIF 440

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M+     P+  T+ A I G C++  L++A  +  +M   GI  + VT   L+   CK 
Sbjct: 441 NSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKI 500

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G   D V FL E + ++    T+   T    +D+  K+    +A A+   M +  +   +
Sbjct: 501 GKAKD-VCFLFENMVENRCLTTAH--TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 557

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V + +LI G C  G+ + +     +M + G  P+V TY  ++N LC  G+++EA      
Sbjct: 558 VTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 617

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG---- 412
           +S  GV+P+  +Y  +++     G + +A + + +M++    P  HI++ ++ G+     
Sbjct: 618 MSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT 677

Query: 413 ---------------------------------RCGDLSNAFSIRDLMLSFGVSSNVFTF 439
                                            R  D+ +A  IRD +   GV +    +
Sbjct: 678 AIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL-Y 736

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N L++   + G I +A  L ++M+  G+FPD    + +I   C        L+    +L 
Sbjct: 737 NFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEFMKLVLD 795

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
               P   +Y  +I G    G ++EA+++ + +
Sbjct: 796 NKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 828



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 105/248 (42%), Gaps = 36/248 (14%)

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M + GF      Y+TLL CL K      A   Y  +   G     I Y+T++  LC +G 
Sbjct: 127 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNG- 185

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
            V+A E                                 F  + L L FG+ ++V T  +
Sbjct: 186 FVQAAEM--------------------------------FCCKVLRLGFGLDTHVCT--S 211

Query: 442 LILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           L+LA  R   + +AF + ++M  +    P+  TY++LI   C  G +  A QL  EM+ +
Sbjct: 212 LVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 271

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G  P   TYT LIK  C  G   +A ++  ++ T     +   + IL  R  R  + ++A
Sbjct: 272 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 331

Query: 561 RDIHQKWL 568
             + +K L
Sbjct: 332 NGVFRKML 339



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 1/109 (0%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R  I+K  VP    +N+LV  LCK G + +AD + ++M +    P+ A  ++ I  YC+ 
Sbjct: 722 RDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKT 780

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
            + D  L     + +N   P+  ++  ++H L  +G + +A K + +++
Sbjct: 781 CKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 829


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/402 (32%), Positives = 202/402 (50%), Gaps = 6/402 (1%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  PDV   N ++  L      +    V REM ++   P   TYN  +  + +    D+A
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262

Query: 208 LHLFSTMANNG--IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
             L   M   G     N VT+N+++  L ++G L +A K +  +      KA+S   T  
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK--KASS--FTYN 318

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            L+ +  + G   +  AL  +M  + I   +V YN +I+G   +  + +A   F +M   
Sbjct: 319 PLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAM 378

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G LPD+ITYN++LN  CK G L EA    G L + G+AP  ++Y T+I G C  G + +A
Sbjct: 379 GLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEA 438

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           R     M+E+   P+   + ++++G  +  +L  A    D MLS G+  + F +N  I A
Sbjct: 439 RRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICA 498

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
           E   G    AF L++ M+L GI+PD  TYN++I   C  G++  A  L  +M+  G+ PD
Sbjct: 499 ELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPD 558

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            ITYT LI  HC RG + EA ++   + + GL    + + IL
Sbjct: 559 CITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTIL 600



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 198/393 (50%), Gaps = 4/393 (1%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L+ +M  +G +P ++T+N +++ L K   +E A     EM  M   P+  TYN+ + GYC
Sbjct: 336 LQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYC 395

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +   L +AL L   +   G+ P  +T+N L+   C+ G L +A +   E++   +     
Sbjct: 396 KAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMV---EQGCFP 452

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DV T TILM+   K  +   A   +++M  K +Q D  AYN  I    + GD   AF   
Sbjct: 453 DVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLR 512

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M+ +G  PD +TYN +++ LCK G L +A      +   G+ PD I+Y  +I   C  
Sbjct: 513 EVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCER 572

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G + +AR+ L  M+   + P    + ++I    R G+L +A+     ML  G+  N  T+
Sbjct: 573 GLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITY 632

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N LI A  R G    A+    EML  G+ P+ +TY LLI  +C  G+   A++LY EM +
Sbjct: 633 NVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQ 692

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            GI PD  T+  L KG   +G+M  A E    I
Sbjct: 693 NGIPPDYCTHNALFKGF-DKGHMYHAIEYLENI 724



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 205/418 (49%), Gaps = 9/418 (2%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+N L+  L + G ++K + +  EM      P   TYNA I G  +  +++ A   F+ 
Sbjct: 315 FTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAE 374

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G+ P+ +T+N +++  CK G L +A+  LG++           V+T   L+D Y +
Sbjct: 375 MRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDL---RRAGLAPTVLTYNTLIDGYCR 431

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +A  L  +M ++    D+  Y +L+NG     ++  A  +F +ML +G  PD   
Sbjct: 432 LGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFA 491

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YNT +      G   +A     V+   G+ PD ++Y  II GLC  G++  A++  + M+
Sbjct: 492 YNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMV 551

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
              + P+   +  +I  +   G LS A  + + M+S G+  +V T+  LI    R G+++
Sbjct: 552 SDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLY 611

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A+   ++ML  GI P+  TYN+LI A C  G   LA   + EML RG+ P+  TYT LI
Sbjct: 612 SAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLI 671

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            G+C  GN  +A  ++ ++   G+  D+     L K +      DK    H    L N
Sbjct: 672 DGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF------DKGHMYHAIEYLEN 723



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 205/408 (50%), Gaps = 6/408 (1%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP--NCATYNAFITGYC 199
           R+M+Q    P ++T+N L++   K G  ++A  +++EM         N  TYN  I+   
Sbjct: 232 REMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLA 291

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R   L+ A  L  +M  +  + +  T+N L+ AL ++G +        E+  +++G   +
Sbjct: 292 REGHLENAAKLVDSMRLSK-KASSFTYNPLITALLERGFVQKVEALQMEM--ENEGIMPT 348

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
            ++T   ++    K+     A   + +M    +  D++ YN ++NG+C  G++  A    
Sbjct: 349 -LVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLL 407

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             + + G  P V+TYNTL++  C+ G L+EA      + + G  PD  +Y  ++ G    
Sbjct: 408 GDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKV 467

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
            ++  AREF   ML K + P+   +N  I      GD   AF +R++M+  G+  +  T+
Sbjct: 468 RNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTY 527

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N +I    + G++ DA  LK +M+ DG+ PD  TY  LI A C  G +  A +L + M+ 
Sbjct: 528 NVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVS 587

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G+ P ++TYT LI   C RGN+  A   F K+  +G+  + I + +L
Sbjct: 588 DGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVL 635



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 185/379 (48%), Gaps = 10/379 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  L    ++  A     +M   G +PD++T+N ++N  CK G+L++A  ++ ++   
Sbjct: 354 AIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRA 413

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P   TYN  I GYCR+  L++A  L   M   G  P+  T+ IL++   K   L  A
Sbjct: 414 GLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMA 473

Query: 243 VKFLGEVLA---DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +F  E+L+     D  A +  I + +++      GD  +A  L   M  K I  D V Y
Sbjct: 474 REFFDEMLSKGLQPDCFAYNTRICAELIL------GDTHKAFQLREVMMLKGIYPDTVTY 527

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           NV+I+G C  G++  A     +M+  G  PD ITY  L++  C++G L EA      +  
Sbjct: 528 NVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVS 587

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ P  ++Y  +I   C  G++  A  +   ML+  + P    +NV+I    R G    
Sbjct: 588 DGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLL 647

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A+     ML  G++ N +T+  LI    R G+  DA  L  EM  +GI PD  T+N L  
Sbjct: 648 AYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFK 707

Query: 480 ASCNLGHIHLALQLYDEML 498
              + GH++ A++  + ++
Sbjct: 708 GF-DKGHMYHAIEYLENIV 725



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 115/251 (45%), Gaps = 36/251 (14%)

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           A + +ML+    P ++TYNTLL+   K+G+ DEAS     +   G             G 
Sbjct: 229 AVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQG-------------GG 275

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM-LSFGVSSN 435
           C+  D+                     +NV+I    R G L NA  + D M LS   SS 
Sbjct: 276 CLLNDVT--------------------YNVVISFLAREGHLENAAKLVDSMRLSKKASS- 314

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
            FT+N LI A    G +    +L+ EM  +GI P + TYN +I        +  A   + 
Sbjct: 315 -FTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFA 373

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
           EM   G+ PD+ITY  ++ G+C  GN+KEA  +   ++  GLA   + +  L   Y R+ 
Sbjct: 374 EMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 433

Query: 556 ESDKARDIHQK 566
             ++AR + ++
Sbjct: 434 GLEEARRLKEE 444



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 65/136 (47%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  +I   C  G +  A  L   M+  G  P V+T+  L++  C+ G+L  A 
Sbjct: 555 LQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAY 614

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
              R+M ++   PN  TYN  I   CR      A H F  M   G+ PN+ T+ +L+   
Sbjct: 615 GWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGN 674

Query: 234 CKKGLLGDAVKFLGEV 249
           C++G   DA++   E+
Sbjct: 675 CREGNWADAIRLYFEM 690



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 1/143 (0%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
           G V   L+     +  +I   C  G + +A    RKM+  G  P+ +T+N L++ LC+ G
Sbjct: 584 GMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTG 643

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
               A H   EM E   +PN  TY   I G CR      A+ L+  M  NGI P+  THN
Sbjct: 644 RTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHN 703

Query: 228 ILVHALCKKGLLGDAVKFLGEVL 250
            L      KG +  A+++L  ++
Sbjct: 704 ALFKGF-DKGHMYHAIEYLENIV 725


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 221/436 (50%), Gaps = 4/436 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           C    +G A  +  KM ++    P+ +T++ L++ LC+ G LE+A  + +EM E    P+
Sbjct: 240 CRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPS 299

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY   I   C +   DKA+ +   MA     PN  T+ IL+  LC++G + +A     
Sbjct: 300 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFR 359

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           ++L          +IT   L++ Y K G    A  L + M + N + +I  YN L+ G C
Sbjct: 360 KMLKHG---LCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 416

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
                  AF    +++  G LPD +TYN L++  CK+G+L+ A + +  ++  G+ PD  
Sbjct: 417 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 476

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           ++  +I GLC  G + +A   L SM++K +  +   +  +IDG+ + G   +   + + M
Sbjct: 477 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 536

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +     +   TFN  + A  +   + +A ++  +M+  G+ P V T+ +LI   C  G  
Sbjct: 537 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 596

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            L+L++ + M + G +P++ TYT +I G C  G ++EAE +   + + G++ +H  + +L
Sbjct: 597 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 656

Query: 548 KKRYRRMKESDKARDI 563
            K + +    D+A  I
Sbjct: 657 VKAHVKAGRLDRAFQI 672



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 202/409 (49%), Gaps = 3/409 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++  A  L+++M++KG  P   T+  L+   C IG  +KA  ++ EM+   
Sbjct: 271 LIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 330

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY   I   CR  ++++A  +F  M  +G+ P  +T N L++  CK+G +  A 
Sbjct: 331 CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAF 390

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L  +   + G    ++ T   LM+   +    ++A  L   +    +  D V YN+L+
Sbjct: 391 QLLSVM---EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILV 447

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GFC  G ++ AF  F  M   G  PD  T+  L++ LCK G+L++A+   G + K G++
Sbjct: 448 DGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGIS 507

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D++++  +I G C  G          +M+E   +   H +N  +D  G+   L+ A ++
Sbjct: 508 LDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAM 567

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+ +G+  +V T   LI    R G    +  + + M   G  P+V+TY ++I   CN
Sbjct: 568 LGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCN 627

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            G +  A  +   M   G++P+  TY  L+K H   G +  A ++ + +
Sbjct: 628 NGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 676



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 208/441 (47%), Gaps = 25/441 (5%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  GKI  A  + RKM++ G  P ++T N L+N  CK G +  A  ++  M 
Sbjct: 338 YTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVME 397

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  TYN  + G CRV++  KA  L   + +NG+ P+RVT+NILV   CK+G L 
Sbjct: 398 KGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLN 457

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A      +   +      D  T T L+D   K G   QA  +   M +K I  D V + 
Sbjct: 458 MAFNIFNSM---NSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT 514

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G C  G        F  M++   L    T+N  L+ L K  KL+EA+   G + K 
Sbjct: 515 ALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKY 574

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P  +++  +I+G C  G+   + + L  M +    P  + + +II+G    G +  A
Sbjct: 575 GLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA 634

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL--- 477
            +I   M SFGVS N FT+  L+ A  + G +  AF +   M+ +G  P+   Y+ L   
Sbjct: 635 ETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG 694

Query: 478 -------IGA-----SCNLGHIHLALQ------LYDEMLRRGITPDIITYTELIKGHCAR 519
                  IGA     + +L    L+ +      L +E+ + G+ P    Y  L+ G C  
Sbjct: 695 FVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGV-PTEDLYNFLVVGLCKE 753

Query: 520 GNMKEAEEVFAKIQTLGLAID 540
           G + EA+++   +   GL  D
Sbjct: 754 GRIIEADQLTQDMVKHGLFPD 774



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 187/386 (48%), Gaps = 7/386 (1%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M+E+    +   Y+  +    ++N    A  ++  M N G     + +  +V+ALCK G 
Sbjct: 150 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 209

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF-QKNIQTDIV 297
           +  A  F  +VL    G  T  V TS +L +   +  D  +A  ++  M  ++N + + V
Sbjct: 210 VQAAEMFCCKVLRLGFGLDT-HVCTSLVLANC--RRDDLGEAFRVFEKMSKEENCRPNSV 266

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            Y++LI+G C  G +  AF    +M+++G  P   TY  L+   C  G  D+A      +
Sbjct: 267 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 326

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
           +     P+  +Y  +I  LC  G I +A      ML+  + P    +N +I+GY + G +
Sbjct: 327 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 386

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
            +AF +  +M       N+ T+N L+    R    + AF L + ++ +G+ PD  TYN+L
Sbjct: 387 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 446

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           +   C  G +++A  +++ M   G+ PD  T+T LI G C  G +++A  +   +   G+
Sbjct: 447 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 506

Query: 538 AIDHIPFRILKKRYRRMKESDKARDI 563
           ++D + F  L   + ++    KA+D+
Sbjct: 507 SLDEVTFTALIDGHCKI---GKAKDV 529



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 203/437 (46%), Gaps = 26/437 (5%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           + R +  ++  LC   K   A  L R+++  G +PD +T+N LV+  CK G L  A ++ 
Sbjct: 404 NIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIF 463

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M+     P+  T+ A I G C++  L++A  +  +M   GI  + VT   L+   CK 
Sbjct: 464 NSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKI 523

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G   D V FL E + ++    T+   T    +D+  K+    +A A+   M +  +   +
Sbjct: 524 GKAKD-VCFLFENMVENRCLTTAH--TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 580

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V + +LI G C  G+ + +     +M + G  P+V TY  ++N LC  G+++EA      
Sbjct: 581 VTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 640

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY----- 411
           +S  GV+P+  +Y  +++     G + +A + + +M++    P  HI++ ++ G+     
Sbjct: 641 MSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT 700

Query: 412 -------GRCGDL-SNAFS--------IRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
                     GDL + + S        + + +   GV +    +N L++   + G I +A
Sbjct: 701 AIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDL-YNFLVVGLCKEGRIIEA 759

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             L ++M+  G+FPD    + +I   C        L+    +L     P   +Y  +I G
Sbjct: 760 DQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHG 818

Query: 516 HCARGNMKEAEEVFAKI 532
               G ++EA+++ + +
Sbjct: 819 LRNEGRVQEAQKLVSDL 835



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/379 (22%), Positives = 150/379 (39%), Gaps = 60/379 (15%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD----- 168
           LE D     A+I  LC  G++  A  +   M++KG   D +T   L++  CKIG      
Sbjct: 471 LEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVC 530

Query: 169 ------------------------------LEKADHVIREMSEMRPSPNCATYNAFITGY 198
                                         L +A+ ++ +M +    P+  T+   I G+
Sbjct: 531 FLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGH 590

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           CR  E   +L +   M   G  PN  T+ I+++ LC  G + +A   L    +      +
Sbjct: 591 CRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETIL---FSMSSFGVS 647

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            +  T  +L+ ++ K G   +A  + + M +   Q +   Y+ L++GF L+     A A 
Sbjct: 648 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL 707

Query: 319 --------------------FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
                                   +K+  +P    YN L+  LCK+G++ EA      + 
Sbjct: 708 SSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMV 767

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           K G+ PD+ +  +II+  C         EF+  +L+   VP    +  +I G    G + 
Sbjct: 768 KHGLFPDK-AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQ 826

Query: 419 NAFS-IRDLMLSFGVSSNV 436
            A   + DL+   G+   V
Sbjct: 827 EAQKLVSDLVRHTGIEEEV 845



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 105/248 (42%), Gaps = 36/248 (14%)

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M + GF      Y+TLL CL K      A   Y  +   G     I Y+T++  LC +G 
Sbjct: 150 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNG- 208

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
            V+A E                                 F  + L L FG+ ++V T  +
Sbjct: 209 FVQAAEM--------------------------------FCCKVLRLGFGLDTHVCT--S 234

Query: 442 LILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           L+LA  R   + +AF + ++M  +    P+  TY++LI   C  G +  A QL  EM+ +
Sbjct: 235 LVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 294

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G  P   TYT LIK  C  G   +A ++  ++ T     +   + IL  R  R  + ++A
Sbjct: 295 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 354

Query: 561 RDIHQKWL 568
             + +K L
Sbjct: 355 NGVFRKML 362


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 215/431 (49%), Gaps = 5/431 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           DY   V ++R LCL G++     L      +G VP  + +N L++  C+ GD+ +   ++
Sbjct: 81  DYSTCV-MVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLL 139

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P   TY A I    R  +L K   L   M   G+ PN   +N +++ALCK 
Sbjct: 140 GEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKC 199

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
                A   L +++     +   DV+T   ++  + + GD  +AL L  +  ++ ++ + 
Sbjct: 200 RSASQASDMLNQMVKS---RFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQ 256

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           ++Y  LI+GFC+ G+   A     +M+ RG  PD+IT   L++ L   G++++A      
Sbjct: 257 LSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREK 316

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +++  V PD   Y  +I GLC    +  A+  L  MLE+ V P+  I+  +IDG+ R   
Sbjct: 317 MAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDK 376

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           LS+A  I + M       ++  +N +I    + G + +A +    M   G  PD FTY  
Sbjct: 377 LSDARKIFEFMEE-KACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTT 435

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L+      G I  +L+L  +M++R   P+I TY  LI G+C  G+   AE++FAK+Q+ G
Sbjct: 436 LVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEG 495

Query: 537 LAIDHIPFRIL 547
           L  + + + +L
Sbjct: 496 LFPNVVHYTVL 506



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 205/434 (47%), Gaps = 14/434 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  L   G +     L  +M  +G  P+V  +N ++N LCK     +A  ++ +M + 
Sbjct: 156 AIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKS 215

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R +P+  T+N  I G+CR  ++ +AL L       G+ PN++++  L+H  C +G    A
Sbjct: 216 RFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVA 275

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E++       T D+IT   L+     +G    AL +   M ++ +  D   YNVL
Sbjct: 276 SDLLVEMMGRGH---TPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVL 332

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C    +S+A     +ML++   PD   Y TL++   +  KL +A   +  + +   
Sbjct: 333 ISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEK-A 391

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y  +I+G C  G + +A   + SM +   +P+   +  ++DGY + GD+S +  
Sbjct: 392 CPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLR 451

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M+      N+FT+ +LI      G  + A  L  +M  +G+FP+V  Y +LIG+  
Sbjct: 452 LLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLF 511

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKG---------HCARGNMKEAEEVFAKIQ 533
               +  A   ++ ML     P+  T   L+ G         +  R + K+A E  A + 
Sbjct: 512 KKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLD 571

Query: 534 TL-GLAIDHIPFRI 546
              GL  D +  RI
Sbjct: 572 VFRGLISDGLDPRI 585



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 175/410 (42%), Gaps = 40/410 (9%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           ++++G   D  T   +V  LC  G +E+   +I         P    YN  I GYCR  +
Sbjct: 73  LVREGGADDYST-CVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGD 131

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           + + L L   M   GI P  VT+  ++H L +KG L      LG                
Sbjct: 132 IGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLG---------------- 175

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
                                 +M  + +  ++  YN +IN  C     S A     QM+
Sbjct: 176 ----------------------EMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMV 213

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           K  F PDV+T+NT++   C++G + EA        + G+ P+Q+SY  +I G C+ G+ +
Sbjct: 214 KSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAM 273

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A + L+ M+ +   P+      +I G    G +++A  +R+ M    V  +   +N LI
Sbjct: 274 VASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLI 333

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               +   +  A +L +EML   + PD F Y  LI        +  A +++ E +     
Sbjct: 334 SGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIF-EFMEEKAC 392

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           PDI+ Y  +IKG+C  G MKEA    + ++  G   D   +  L   Y +
Sbjct: 393 PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAK 442



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 186/423 (43%), Gaps = 26/423 (6%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           + LK +R+   +R  LE +   +  +I   C+ G+   A  L  +M+ +G  PD++T   
Sbjct: 239 EALKLLREA--IRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGA 296

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           L++ L   G +  A  V  +M+E +  P+   YN  I+G C+   L  A +L   M    
Sbjct: 297 LIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQK 356

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           ++P++  +  L+    +   L DA K   E + +   KA  D++   +++  Y K G   
Sbjct: 357 VQPDKFIYTTLIDGFVRSDKLSDARKIF-EFMEE---KACPDIVAYNVMIKGYCKFGMMK 412

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A+   + M +     D   Y  L++G+   GDIS++    C M+KR   P++ TY +L+
Sbjct: 413 EAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLI 472

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
              C  G    A   +  +   G+ P+ + Y  +I  L     +++A  +   ML     
Sbjct: 473 CGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCP 532

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P     + +++G   C         R  M++   S                 ++ D F  
Sbjct: 533 PNDATVHYLVNGLVNC---------RHGMVNSNRSDTKQAHEK--------SALLDVF-- 573

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            + ++ DG+ P +  YN +I + C    +  A+ L D+M  +G  PD IT+  L+ G  +
Sbjct: 574 -RGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSS 632

Query: 519 RGN 521
            G 
Sbjct: 633 AGE 635



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 155/333 (46%), Gaps = 7/333 (2%)

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           ++V  LC +G + +     G + A          +   +L+D Y + GD  + L L  +M
Sbjct: 86  VMVRGLCLEGRVEEG---RGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEM 142

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
             K I   +V Y  +I+     GD++   +   +M  RG  P+V  YNT++N LCK    
Sbjct: 143 ETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSA 202

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            +AS     + K+   PD +++ T+I G C  GD+ +A + L   + + + P    +  +
Sbjct: 203 SQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPL 262

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I G+   G+   A  +   M+  G + ++ T  ALI      G + DA  ++++M    +
Sbjct: 263 IHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQV 322

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PD   YN+LI   C    +  A  L +EML + + PD   YT LI G      + +A +
Sbjct: 323 MPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARK 382

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRR---MKES 557
           +F  ++      D + + ++ K Y +   MKE+
Sbjct: 383 IFEFMEEKACP-DIVAYNVMIKGYCKFGMMKEA 414



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 113/247 (45%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A  L+ +M  +    D  +  V++ G CL G +             G +P  + YN L+
Sbjct: 64  RARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLI 123

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           +  C++G +       G +   G+ P  ++Y  II  L   GD+ K    L  M  + + 
Sbjct: 124 DGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLS 183

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P   I+N +I+   +C   S A  + + M+    + +V TFN +I    R G + +A  L
Sbjct: 184 PNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKL 243

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            +E +  G+ P+  +Y  LI   C  G   +A  L  EM+ RG TPD+IT   LI G   
Sbjct: 244 LREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVV 303

Query: 519 RGNMKEA 525
            G + +A
Sbjct: 304 SGQVNDA 310



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/351 (21%), Positives = 130/351 (37%), Gaps = 87/351 (24%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  L + G++  AL +R KM ++  +PD   +N L++ LCK   L  A +++ EM E 
Sbjct: 296 ALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQ 355

Query: 183 R----------------------------------PSPNCATYNAFITGYCRVNELDKAL 208
           +                                    P+   YN  I GYC+   + +A+
Sbjct: 356 KVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAV 415

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
              S+M   G  P+  T+  LV    KKG +  +++ L +++     +   ++ T   L+
Sbjct: 416 TCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKR---RCKPNIFTYASLI 472

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML----- 323
             Y   GD + A  L+  M  + +  ++V Y VLI        +  A AYF  ML     
Sbjct: 473 CGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCP 532

Query: 324 ---------------------------------------------KRGFLPDVITYNTLL 338
                                                          G  P +  YN ++
Sbjct: 533 PNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAII 592

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
             LC+   L +A      +S  G  PD I++ +++ G    G+  K R  L
Sbjct: 593 FSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSAL 643


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 225/459 (49%), Gaps = 16/459 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+      + G A+ + ++M ++G  PD   +N L+  L K   +++A   + EM 
Sbjct: 458 YTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMV 517

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    P+  TY AFI+GY    E   A      M   G+ PN+V    L++  CKKG + 
Sbjct: 518 ENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVI 577

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A      ++   +     D  T T+LM+   KNG    A  ++++M  K I  D+ +Y 
Sbjct: 578 EACSAFRSMV---EQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYG 634

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+GF   G++  A + F +M++ G   +VI YN LL   C+ G++++A      +S  
Sbjct: 635 TLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGK 694

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  P+ ++Y TII G C  GD+ +A +    M  K +VP+  ++  ++DG  R  D+  A
Sbjct: 695 GFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 754

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM---LLDGIF-----PDVF 472
            +I +     G +S+   FNALI    +    F    L  +M   L+DG F     P+  
Sbjct: 755 ITIFETNEK-GCASSSAPFNALINWVFK----FGKTELTTDMINRLMDGSFDKFGKPNDV 809

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TYN++I   C  G++  A +L+  M +  + P +ITYT L+ G+   G   E   VF ++
Sbjct: 810 TYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEV 869

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
              G+  D+I + ++   + +   + KA  +  +   +N
Sbjct: 870 IAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKN 908



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 202/434 (46%), Gaps = 11/434 (2%)

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           +  AL L++ M  KG VP   ++N L++ LCK   LE A  ++ EM+ +    +   Y+ 
Sbjct: 261 VDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSI 320

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            I G  +    D A  L   M ++G   + + ++  +  + K+G +  A           
Sbjct: 321 LIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALF------- 373

Query: 254 DGKATSDVITS----TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           DG  T  V         L++ +F+  +  +   L  ++ ++NI      Y   + G C +
Sbjct: 374 DGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSS 433

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           GD+  A+    +M   G  P+V+ Y TL+    ++ +  +A      + + G+APD   Y
Sbjct: 434 GDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCY 493

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            ++I GL     + +AR FLL M+E    P+   +   I GY   G+ ++A      ML 
Sbjct: 494 NSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLE 553

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            GV  N      LI    + G + +A S  + M+  GI  D  TY +L+      G ++ 
Sbjct: 554 CGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVND 613

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A +++ EM  +GI PD+ +Y  LI G    GNM++A  +F ++   GL  + I + +L  
Sbjct: 614 AEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLG 673

Query: 550 RYRRMKESDKARDI 563
            + R  E +KA+++
Sbjct: 674 GFCRSGEIEKAKEL 687



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 209/442 (47%), Gaps = 3/442 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  L  G     A  L  +M+  G   D + ++Y +  + K G +EKA  +   M    
Sbjct: 321 LIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFG 380

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P    Y + I G+ R   + K   L   +    I  +  T+   V  +C  G L  A 
Sbjct: 381 VTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAY 440

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             + E+ A        +V+  T L+ ++ +      A+ +  +M ++ I  D   YN LI
Sbjct: 441 NIVKEMGASG---CRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLI 497

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G      +  A ++  +M++ GF PD  TY   ++   + G+   A  +   + + GV 
Sbjct: 498 IGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVI 557

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+++    +I   C  G +++A     SM+E+ ++ +   + V+++G  + G +++A  I
Sbjct: 558 PNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEI 617

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G++ +VF++  LI   ++ G++  A S+  EM+  G+  +V  YN+L+G  C 
Sbjct: 618 FHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCR 677

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G I  A +L DEM  +G  P+ +TY  +I G+C  G++ EA ++F +++  GL  D   
Sbjct: 678 SGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFV 737

Query: 544 FRILKKRYRRMKESDKARDIHQ 565
           +  L     R+ + ++A  I +
Sbjct: 738 YTTLVDGCCRLNDVERAITIFE 759



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 194/416 (46%), Gaps = 17/416 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I + C  GK+  A    R M+++G + D  T+  L+N L K G +  A+ +  EM   
Sbjct: 565 GLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGK 624

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  +Y   I G+ ++  + KA  +F  M   G+  N + +N+L+   C+ G +  A
Sbjct: 625 GIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKA 684

Query: 243 VKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
            + L E+     GK    + +T   ++D Y K+GD  +A  L+++M  K +  D   Y  
Sbjct: 685 KELLDEM----SGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTT 740

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY-----GV 356
           L++G C   D+  A   F +  ++G       +N L+N + K GK +  +        G 
Sbjct: 741 LVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGS 799

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
             K G  P+ ++Y  +I  LC  G++  A+E    M + +++P    +  +++GY + G 
Sbjct: 800 FDKFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGR 858

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL-----DGIFPDV 471
            S  FS+ D +++ G+  +   ++ +I A  + G    A  L  +M       DG    +
Sbjct: 859 RSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSI 918

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            T   L+     +G + +A ++ + M+R    PD  T  ELI   C   N + A +
Sbjct: 919 STCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMAAD 974



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/430 (23%), Positives = 188/430 (43%), Gaps = 18/430 (4%)

Query: 138 LW-LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            W + + M+++  V DV ++  L+   C+ G+++ A  V+ +  E       AT N    
Sbjct: 208 FWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEE---ELGTATLN---- 260

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
                  +D+AL L  +M+  G+ P+R ++N+L+  LCK+  L DA   L E+   +   
Sbjct: 261 -------VDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEM---NSVG 310

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
             +D +  +IL+D   K  +   A  L ++M       D + Y+  I      G +  A 
Sbjct: 311 LFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAK 370

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           A F  M+  G  P    Y +L+    ++  + +       + K  +     +Y T ++G+
Sbjct: 371 ALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGM 430

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  GD+  A   +  M      P   I+  +I  + +     +A  +   M   G++ + 
Sbjct: 431 CSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDT 490

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           F +N+LI+  ++   + +A S   EM+ +G  PD FTY   I      G    A +   E
Sbjct: 491 FCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKE 550

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           ML  G+ P+ +  T LI  +C +G + EA   F  +   G+  D   + +L     +  +
Sbjct: 551 MLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGK 610

Query: 557 SDKARDIHQK 566
            + A +I  +
Sbjct: 611 VNDAEEIFHE 620



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 155/352 (44%), Gaps = 40/352 (11%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D + +  ++  L   GK+  A  +  +M  KG  PDV ++  L++   K+G+++KA  + 
Sbjct: 594 DAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIF 653

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM +   + N   YN  + G+CR  E++KA  L   M+  G  PN VT+  ++   CK 
Sbjct: 654 DEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKS 713

Query: 237 GLLGDAVKFLGEV----LADDDGKATSDVITSTILMD-----SYFKNGDK--------FQ 279
           G L +A +   E+    L  D    T+ V     L D     + F+  +K        F 
Sbjct: 714 GDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFN 773

Query: 280 ALALWNDMFQK-NIQTDI-----------------VAYNVLINGFCLNGDISSAFAYFCQ 321
           AL  W   F K  + TD+                 V YN++I+  C  G++ +A   F  
Sbjct: 774 ALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHH 833

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M K   +P VITY +LLN   K G+  E    +  +   G+ PD I Y  II      G 
Sbjct: 834 MQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGM 893

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNV-----IIDGYGRCGDLSNAFSIRDLML 428
             KA   L  M  K+ V +    ++     ++ G+ + G++  A  + + M+
Sbjct: 894 TTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMV 945



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/437 (22%), Positives = 185/437 (42%), Gaps = 37/437 (8%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           QK T   + + ++L  +LC  G +EKA  V+  M E R  P    +++ +          
Sbjct: 90  QKVTEQKLDSFSFLALDLCNFGSIEKAHSVVIRMIE-RKWPVAEVWSSIV---------- 138

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           + L  F   +++ +    +   IL+    +KG L +AV F+     D D      +    
Sbjct: 139 RCLREFVGKSDDRV----LLFGILIDGYIEKGFLDEAV-FVFSSTKDLDLDLVPSLARCN 193

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS------------ 313
            L+D+  K         ++  M ++N+  D+ +Y +LI   C +G++             
Sbjct: 194 HLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEE 253

Query: 314 ---------SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
                     A      M  +G +P   +YN L++ LCKQ +L++A      ++  G+  
Sbjct: 254 LGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFA 313

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D ++Y  +I GL    +   A   +  M+      +P +++  I    + G +  A ++ 
Sbjct: 314 DNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALF 373

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           D M++FGV+     + +LI    R  ++   + L  E+    I    +TY   +   C+ 
Sbjct: 374 DGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSS 433

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G +  A  +  EM   G  P+++ YT LIK    +    +A  V  +++  G+A D   +
Sbjct: 434 GDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCY 493

Query: 545 RILKKRYRRMKESDKAR 561
             L     + K+ D+AR
Sbjct: 494 NSLIIGLSKAKKMDEAR 510



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 16/278 (5%)

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQM--LKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
           ++ + +LI+G+   G +  A   F     L    +P +   N LL+ L K+ +LD     
Sbjct: 152 VLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDV 211

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  + +  V  D  SY+ +I   C  G++  A++ LL         E  +    ++    
Sbjct: 212 YKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLK-------TEEELGTATLN---- 260

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              +  A  ++  M   G+  +  ++N LI    +   + DA SL  EM   G+F D   
Sbjct: 261 ---VDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVA 317

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y++LI       +   A  L  EM+  G + D + Y   I      G M++A+ +F  + 
Sbjct: 318 YSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMI 377

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           T G+      +  L + + R K   K  ++  +   RN
Sbjct: 378 TFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRN 415


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 219/436 (50%), Gaps = 10/436 (2%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I  LC   +I  A  L  +M+ +G  P+  T+  L++ LC++G +++A  ++ ++    P
Sbjct: 312 IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV----P 367

Query: 185 SPNCATYNAFITGYCRVNELDKALHLF-STMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           +PN   +N  I GY     LD+A  +   +M + G  P+  T+N L+  LCKKG L  A 
Sbjct: 368 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 427

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + + E+          +VIT TIL+D + K G   +A  + ++M  K +  + V YN LI
Sbjct: 428 ELMNEMQIKG---CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLI 484

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C +  +  A   F  M  +G  PD+ T+N+L+  LCK  K +EA   Y  +   GV 
Sbjct: 485 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 544

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            + I+Y T+I      G + +A + +  ML +    +   +N +I    R G++    ++
Sbjct: 545 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 604

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M+S G++ N  + N LI    R G+I  A    ++M+  G+ PD+ TYN LI   C 
Sbjct: 605 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCK 664

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G    AL L+D++   GI PD ITY  LI  HC  G   +A  + ++    G   + + 
Sbjct: 665 TGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVT 724

Query: 544 FRILKKRYRRMKESDK 559
           + IL   +  +KE D+
Sbjct: 725 WYILVSNF--IKEGDQ 738



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 219/454 (48%), Gaps = 29/454 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            V++ LCL  ++ +A  L + M + G VP+ + +  L++ L K+G + +   ++ EM  M
Sbjct: 240 VVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLM 299

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  T+N  I G C++  + +A  L   M   G  PN  T+ +L+H LC+ G + +A
Sbjct: 300 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 359

Query: 243 VKFLGEVLAD------------------DDGKAT-----------SDVITSTILMDSYFK 273
              L +V                     D+ KA             D+ T   L+    K
Sbjct: 360 RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCK 419

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G    A  L N+M  K  + +++ Y +LI+ FC  G +  A     +M  +G   + + 
Sbjct: 420 KGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG 479

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN L++ LCK  K+ +A + +G +S  G  PD  ++ ++I GLC      +A      ML
Sbjct: 480 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 539

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            + V+     +N +I  + R G +  A  + + ML  G   +  T+N LI A  R G+I 
Sbjct: 540 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 599

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
              +L ++M+  G+ P+  + N+LI   C  G+I  AL+   +M+ RG+TPDI+TY  LI
Sbjct: 600 KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLI 659

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G C  G  +EA  +F K+Q  G+  D I +  L
Sbjct: 660 NGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 693



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 174/373 (46%), Gaps = 41/373 (10%)

Query: 82  NPQAV-FNAL--DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
           NP  V FN L    + +  LD  K +     +      D   +  +I  LC  G + +A 
Sbjct: 368 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 427

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            L  +M  KG  P+V+T+  L++  CK G LE+A +V+ EMS    + N   YN  I+  
Sbjct: 428 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 487

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK----------------------- 235
           C+  ++  AL++F  M++ G +P+  T N L+  LCK                       
Sbjct: 488 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 547

Query: 236 ------------KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
                       +G + +A+K + ++L         D IT   L+ +  + G+  + LAL
Sbjct: 548 ITYNTLIHAFLRRGAMQEALKLVNDMLFRG---CPLDDITYNGLIKALCRAGNIEKGLAL 604

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           + DM  K +  + ++ N+LING C  G+I  A  +   M+ RG  PD++TYN+L+N LCK
Sbjct: 605 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCK 664

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G+  EA + +  L   G+ PD I+Y T+I   C  G    A   L   ++   +P    
Sbjct: 665 TGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVT 724

Query: 404 WNVIIDGYGRCGD 416
           W +++  + + GD
Sbjct: 725 WYILVSNFIKEGD 737



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 193/430 (44%), Gaps = 15/430 (3%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           QKG       +  L+++L   G+ +  D ++ +M +       + +   +  Y R     
Sbjct: 122 QKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPG 181

Query: 206 KALHLFSTMAN-NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD-VIT 263
           +A  L   M       P   ++N+++  L    L G+  K +  V  +   K  S  V T
Sbjct: 182 QATRLLLDMRGVYSCEPTFRSYNVVLDVL----LAGNCPKVVPNVFYEMLSKGISPTVYT 237

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             ++M +     +   A AL  DM +     + + Y  LI+     G ++       +ML
Sbjct: 238 FGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEML 297

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G +PDV T+N  ++ LCK  ++ EA+     +   G  P+  +Y  ++ GLC  G + 
Sbjct: 298 LMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVD 357

Query: 384 KAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFN 440
           +AR  L      + VP P++  +N +I+GY   G L  A ++  + MLS G   ++FT+N
Sbjct: 358 EARMLL------NKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYN 411

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            LIL   + G +  A  L  EM + G  P+V TY +LI   C  G +  A  + DEM  +
Sbjct: 412 TLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK 471

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G+  + + Y  LI   C    +++A  +F  + + G   D   F  L     ++ + ++A
Sbjct: 472 GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEA 531

Query: 561 RDIHQKWLLR 570
             ++Q  LL 
Sbjct: 532 LGLYQDMLLE 541


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 218/476 (45%), Gaps = 55/476 (11%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I DLC   +      + R+M +    P+ +T+N L+N L K G +  A  V  EMS   
Sbjct: 255 LIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCN 314

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYN  I G+C    +++AL L   M ++G+RPN VT+  L++ + K    G   
Sbjct: 315 LLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVS 374

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L  +  D         I+ T ++D   KNG   +A+ L +DM + ++  DIV ++VL+
Sbjct: 375 SVLERMRMDG---VRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLV 431

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NGF                LK G +P+ + ++TL+   CK G L EA + Y V++++G  
Sbjct: 432 NGF----------------LKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHV 475

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D  +   ++   C  G + +A  F+  M    + P    ++ IID YG  GD   AFS+
Sbjct: 476 SDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSV 535

Query: 424 RDLMLSFGVSSNVFT-----------------------------------FNALILAETR 448
            D M S G   + FT                                   +N ++   +R
Sbjct: 536 FDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSR 595

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG-ITPDII 507
            G++ +A +L  EM+++   PD FTY  LI   C  G +  AL L    + +G ++P+  
Sbjct: 596 SGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPA 655

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            YT L+ G    G+ K A  +F  +   G+  D I F +L  RY R  +  K  DI
Sbjct: 656 MYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDI 711



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 184/402 (45%), Gaps = 23/402 (5%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           ++MI     P+V T N L+N LC+ G  + A  ++R+M E    P   TYN  +  YC+ 
Sbjct: 168 KEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKK 227

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
                A  L   MA+ GI  +  T+N+L+  LC+K         L  +  +       + 
Sbjct: 228 GRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKN---MVYPNE 284

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           IT   L++   K G    A  ++ +M   N+  + V YN LI G C NG+I  A      
Sbjct: 285 ITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDV 344

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M+  G  P+ +TY  LLN + K  +    S     +   GV    ISY T+I GLC +G 
Sbjct: 345 MVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGL 404

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + +A + L  ML+ SV P+   ++V+++G+                L  G+  N    + 
Sbjct: 405 LEEAVQLLDDMLKVSVSPDIVTFSVLVNGF----------------LKTGLVPNRVLHST 448

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI    + G++ +A +    M   G   D FT ++L+ + C  G +  A    D M R G
Sbjct: 449 LIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMG 508

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           + P  +T+  +I  +   G+  +A  VF K+ +LG    H+P
Sbjct: 509 LAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLG----HLP 546



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 188/420 (44%), Gaps = 5/420 (1%)

Query: 117  DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHV 175
            D   + ++I  LC  GK+  AL L  + I+KG + P+   +  LV+ L K G  + A ++
Sbjct: 617  DSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYM 676

Query: 176  IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
              +M      P+   +N  +  Y R  ++ K   + STM +  +  N  T+NIL+H   K
Sbjct: 677  FEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSK 736

Query: 236  KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            +  +    K   E++         D +T   L+  Y K+G    A+     +  +  + D
Sbjct: 737  RHGMARCSKLYNEMIIHG---FAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVD 793

Query: 296  IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
                NVL++  C   +I  AF    Q+   G  P+V TYN+L N   +    DEA     
Sbjct: 794  CFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILH 853

Query: 356  VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
             L + G AP    + T+I+G+C  G++  A E    M    V  +    + II G  R  
Sbjct: 854  ALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSR 913

Query: 416  DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
                A  I  +ML   +   V TF  L+    + G++  A  L+  M    +  DV  YN
Sbjct: 914  KTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYN 973

Query: 476  LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN-MKEAEEVFAKIQT 534
            +LI   C  G I  A +LY+EM +R I P+   Y  LI      GN + E+E++   ++T
Sbjct: 974  VLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLRT 1033



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 216/479 (45%), Gaps = 39/479 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  +I + C  G +  AL     M Q G V D  T + LV   C+ G LE+A++ +  MS
Sbjct: 446 HSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMS 505

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            M  +P+  T++  I  Y    +  KA  +F  M + G  P++ T+  L+  L   G + 
Sbjct: 506 RMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHIN 565

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A  F+          A      +T+L  +  ++G+   A+AL ++M   N   D   Y 
Sbjct: 566 EAKIFMHR--PSSIPYAIGSTFYNTMLTLTS-RSGNLSNAVALLDEMVMNNFVPDSFTYT 622

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFL-PDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
            LI G C  G +  A     + +++G L P+   Y +L++ L K+G    A + +  +  
Sbjct: 623 SLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLN 682

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            GV PD I++  ++      G + K  + L +M  +S+      +N+++ GY +   ++ 
Sbjct: 683 EGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMAR 742

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
              + + M+  G + +  T+++LIL   + GS+  A    +++ ++G   D FT N+L+ 
Sbjct: 743 CSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVS 802

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITY------------------------------ 509
             C    I +A  L  ++   G+TP++ TY                              
Sbjct: 803 KLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAP 862

Query: 510 -----TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
                T LI+G C  GN+K A E+  +++ LG++   +    + +   R +++D+A  I
Sbjct: 863 TCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRI 921



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 191/404 (47%), Gaps = 6/404 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI-REMSEMRPSPNCAT 190
           G +  A+ L  +M+    VPD  T+  L+  LC+ G +  A  +  R + +   SPN A 
Sbjct: 597 GNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAM 656

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y + + G  +      AL++F  M N G++P+ +  N+L+    +KG +      + ++L
Sbjct: 657 YTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSK----VNDIL 712

Query: 251 ADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +    ++   ++ T  IL+  Y K     +   L+N+M       D + ++ LI G+C +
Sbjct: 713 STMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKS 772

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G +  A  +  ++   GF  D  T N L++ LC++ ++  A      L+  GV P+  +Y
Sbjct: 773 GSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTY 832

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            ++  G        +AR  L ++LE    P    +  +I G  R G++  A  ++D M  
Sbjct: 833 NSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKI 892

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            GVSS     +A+I    R     +A  +   ML   I P V T+  L+   C  G++  
Sbjct: 893 LGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAK 952

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           AL+L   M +  +  D+  Y  LI G CA G+++ A +++ +++
Sbjct: 953 ALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEME 996



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 185/433 (42%), Gaps = 19/433 (4%)

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           +G A+   R M  +G  P V T N ++  L K  +++      +EM   R SPN AT+N 
Sbjct: 125 VGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVATFNI 184

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            +   C   +   A  L   M   G  P  VT+N L++  CKKG    A + +  + +  
Sbjct: 185 LLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKG 244

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
                +DV T  +L+D   +     +   +   M +  +  + + YN LING    G I 
Sbjct: 245 ---IAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIG 301

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A   F +M     LP+ +TYNTL+   C  G ++EA     V+   G+ P++++Y  ++
Sbjct: 302 VATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALL 361

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            G+  H         L  M    V      +  +IDG  + G L  A  + D ML   VS
Sbjct: 362 NGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVS 421

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            ++ TF+ L+                   L  G+ P+   ++ LI   C +G++  AL  
Sbjct: 422 PDIVTFSVLV----------------NGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNA 465

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           Y  M + G   D  T + L+   C  G ++EAE     +  +GLA   + F  +   Y  
Sbjct: 466 YAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGN 525

Query: 554 MKESDKARDIHQK 566
             ++ KA  +  K
Sbjct: 526 SGDALKAFSVFDK 538



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 187/410 (45%), Gaps = 24/410 (5%)

Query: 173 DHVIREMSEMRP--SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           ++V   + E  P  + N A ++  I    R N +  A+  F  M   G  P+  T N+++
Sbjct: 92  NNVFGALMETYPFCNSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVL 151

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
            +L K   +     F  E++A+   + + +V T  IL+++  + G    A  L   M + 
Sbjct: 152 GSLVKDREVDLFWSFFKEMIAN---RVSPNVATFNILLNALCERGKFKSAGVLLRKMDET 208

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
                 V YN L+N +C  G   +A      M  +G   DV TYN L++ LC++ +  + 
Sbjct: 209 GHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKG 268

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                 + K  V P++I+Y T+I GL   G I  A +    M   +++P    +N +I G
Sbjct: 269 YLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFG 328

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           +   G++  A  + D+M+S G+  N  T+ AL+   ++        S+ + M +DG+   
Sbjct: 329 HCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVG 388

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG--------------- 515
             +Y  +I   C  G +  A+QL D+ML+  ++PDI+T++ L+ G               
Sbjct: 389 HISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHST 448

Query: 516 ----HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
               +C  GN+KEA   +A +   G   DH    +L   + R    ++A 
Sbjct: 449 LIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAE 498



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 120/524 (22%), Positives = 211/524 (40%), Gaps = 77/524 (14%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           LKE L+    M  +G V     +D+     ++   C  G++  A +    M + G  P  
Sbjct: 459 LKEALNAYAVMNQSGHV-----SDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSS 513

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEM------------------------------R 183
           +T + +++     GD  KA  V  +M+ +                              R
Sbjct: 514 VTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHR 573

Query: 184 PSP-----NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           PS          YN  +T   R   L  A+ L   M  N   P+  T+  L+  LC+KG 
Sbjct: 574 PSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGK 633

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           +  A+   G  +  + G  + +    T L+D   K G    AL ++ DM  + +Q D +A
Sbjct: 634 MVPALLLSGRAI--EKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIA 691

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           +NVL++ +   G +S        M  R    ++ TYN LL+   K+  +   S  Y  + 
Sbjct: 692 FNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMI 751

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G APD++++ ++I G C  G +  A +FL  +  +    +    NV++       ++ 
Sbjct: 752 IHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIK 811

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            AF +   +   GV+ NV T+N+L     R  S  +A  +   +L +G  P    +  LI
Sbjct: 812 MAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLI 871

Query: 479 GASCNLGHIHLALQLYDE-----------------------------------MLRRGIT 503
              C +G++  A++L DE                                   ML   I 
Sbjct: 872 RGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQII 931

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           P + T+T L+  +C  GN+ +A E+ + ++   + +D   + +L
Sbjct: 932 PTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVL 975


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/495 (27%), Positives = 224/495 (45%), Gaps = 74/495 (14%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC  GK   A  L ++M +KG   + +T++ L++  C+ G L+ A H + +M   
Sbjct: 371 ALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMA 430

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
                   YN+ I G+C++  L  A+  F  M + G++P  V++  L+   C KG L +A
Sbjct: 431 GIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEA 490

Query: 243 VKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
            +   E+     GK  + +  T T L+ + F+      A  L+++M ++N+  + V YNV
Sbjct: 491 FRLYHEM----TGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNV 546

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +I G C  G+   AF    QM+++G +PD  TY  L++ LC  G++ EA  F   L +  
Sbjct: 547 MIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREH 606

Query: 362 VAPDQISYKTIIQGLCIHGDIVKA----RE------------------------------ 387
              +++ Y  ++ G C  G +  A    RE                              
Sbjct: 607 FKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVF 666

Query: 388 -FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             L +M ++ + P+  I+  +IDGY + G +  AF I D+M+  G + N+ T+  LI   
Sbjct: 667 GLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINEL 726

Query: 447 TRGGSIFDAFSLKKEML----------------------------------LDGIFPDVF 472
            + G +  A  L KEML                                  L G+  +  
Sbjct: 727 CKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTV 786

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           +YN+L+   C LG +  A +L DEM+   I PD ITY+ +I   C RGN+  A E +  +
Sbjct: 787 SYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTM 846

Query: 533 QTLGLAIDHIPFRIL 547
              GL  D + +  L
Sbjct: 847 LNKGLKPDTLAYNFL 861



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 206/437 (47%), Gaps = 3/437 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A  L  ++ + G +P +  +N L+N LCK G  ++A+ + +EM E     N  TY
Sbjct: 345 GKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTY 404

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  I  +CR  +LD A+H    M   GI+     +N L++  CK G L  AV F  E++ 
Sbjct: 405 SILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMI- 463

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             D      V++ T L+  Y   G   +A  L+++M  K I  +   +  LI+       
Sbjct: 464 --DKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANR 521

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           ++ AF  F +ML++  +P+ +TYN ++   CK+G   +A      + + G+ PD  +Y+ 
Sbjct: 522 MTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRP 581

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I  LC  G + +A++F+  +  +        ++ ++ GY + G L +A  +   M+  G
Sbjct: 582 LISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRG 641

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           V  ++  +  LI    +       F L K M    + PD   Y  +I      G +  A 
Sbjct: 642 VDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAF 701

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            ++D M+  G TP+I+TYT LI   C  G M +AE ++ ++       +H+ +       
Sbjct: 702 GIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHL 761

Query: 552 RRMKESDKARDIHQKWL 568
            R    +KA  +H   L
Sbjct: 762 AREGSMEKAVQLHNDML 778



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 197/408 (48%), Gaps = 4/408 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I   C  GK+  A  L  +M  KG  P+  T   L++ L +   +  A  +  EM 
Sbjct: 474 YTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEML 533

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TYN  I G+C+     KA  L + M   G+ P+  T+  L+ +LC  G + 
Sbjct: 534 EQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVC 593

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A KF+ ++  +       + +  + L+  Y K G    AL +  +M ++ +  D+V Y 
Sbjct: 594 EAKKFIDDLHRE---HFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYA 650

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           VLI+G     D S+ F     M  +   PD + Y ++++   K G + +A   + ++   
Sbjct: 651 VLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDE 710

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  P+ ++Y T+I  LC  G + KA      ML  +  P    +   +D   R G +  A
Sbjct: 711 GCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKA 770

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + ML  G+ +N  ++N L+    + G + +A  L  EM+ + IFPD  TY+ +I  
Sbjct: 771 VQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQ 829

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
            C  G++  A++ +D ML +G+ PD + Y  LI G C  G + +A E+
Sbjct: 830 CCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFEL 877



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 198/417 (47%), Gaps = 5/417 (1%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           +C L    R    V+  L    ++   L L  +++  G  PD+  +  ++   C++ +  
Sbjct: 186 QCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFA 245

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           KA  +I+ M       N   YN  I G C+   + +A+ + + +   G+  + VT+  LV
Sbjct: 246 KAKEMIQRMES--SDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLV 303

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LCK          + E++  + G   ++   S+ L++   + G    A  L N + + 
Sbjct: 304 LGLCKVQEFEVGAGVMDEMI--ELGFVPTEAALSS-LVEGLRRKGKVVDAFDLVNRVKKV 360

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
                +  YN LIN  C +G    A   F +M ++G   + +TY+ L++  C++GKLD A
Sbjct: 361 GAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTA 420

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            HF G +   G+      Y ++I G C  G++  A  F   M++K + P    +  +I G
Sbjct: 421 IHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISG 480

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           Y   G L  AF +   M   G++ N +TF  LI A  R   + DAF L  EML   + P+
Sbjct: 481 YCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPN 540

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
             TYN++I   C  G+   A +L ++M+++G+ PD  TY  LI   C+ G + EA++
Sbjct: 541 EVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKK 597



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 206/436 (47%), Gaps = 9/436 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD--VLTHNYLVNELCKIGDLEK 171
           +  D   +VAVIR  C       A    ++MIQ+    D  V+ +N L++ LCK   + +
Sbjct: 224 IRPDIYIYVAVIRSFCELKNFAKA----KEMIQRMESSDLNVVVYNVLIHGLCKNKRVWE 279

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A  +   + +   + +  TY   + G C+V E +    +   M   G  P     + LV 
Sbjct: 280 AVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVE 339

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            L +KG + DA   +  V       A   +     L++S  K+G   +A  L+ +M +K 
Sbjct: 340 GLRRKGKVVDAFDLVNRV---KKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKG 396

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           +  + V Y++LI+ FC  G + +A  +  +M+  G    V  YN+L+N  CK G L  A 
Sbjct: 397 LCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAV 456

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
            F+  +   G+ P  +SY ++I G C  G + +A      M  K + P  + +  +I   
Sbjct: 457 SFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISAL 516

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            R   +++AF + D ML   +  N  T+N +I    + G+   AF L  +M+  G+ PD 
Sbjct: 517 FRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDT 576

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
           +TY  LI + C+ G +  A +  D++ R     + + Y+ L+ G+C  G +++A  V  +
Sbjct: 577 YTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCRE 636

Query: 532 IQTLGLAIDHIPFRIL 547
           +   G+ +D + + +L
Sbjct: 637 MVKRGVDMDLVCYAVL 652



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 4/293 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++   C  G++  AL + R+M+++G   D++ +  L++   K  D      +++ M 
Sbjct: 614 YSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMH 673

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           + R  P+   Y + I GY +   + KA  ++  M + G  PN VT+  L++ LCK GL+ 
Sbjct: 674 DQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMD 733

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A     E+L  +   +T + +T    +D   + G   +A+ L NDM  K +  + V+YN
Sbjct: 734 KAELLWKEMLVSN---STPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYN 789

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +L+ GFC  G +  A     +M+     PD ITY+T++   C++G LD A  F+  +   
Sbjct: 790 ILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNK 849

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           G+ PD ++Y  +I G CI G++ KA E    M+ + V P       +  G  R
Sbjct: 850 GLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASR 902



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 173/408 (42%), Gaps = 40/408 (9%)

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           + R M +    P   T    + G  ++  +D  L LF  + + GIRP+   +  ++ + C
Sbjct: 180 IFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFC 239

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           +      A + +  + + D      +V+   +L+    KN   ++A+ + N + QK +  
Sbjct: 240 ELKNFAKAKEMIQRMESSD-----LNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTA 294

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
             V Y  L+ G C   +         +M++ GF+P     ++L+  L ++GK+ +A    
Sbjct: 295 SEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLV 354

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + K G  P    Y  +I  LC  G   +A      M EK +      ++++ID + R 
Sbjct: 355 NRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRR 414

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G L  A      M+  G+   V+ +N+LI    + G++  A S   EM+  G+ P V +Y
Sbjct: 415 GKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSY 474

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL---------------------- 512
             LI   CN G +H A +LY EM  +GI P+  T+T L                      
Sbjct: 475 TSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLE 534

Query: 513 -------------IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
                        I+GHC  GN  +A E+  ++   GL  D   +R L
Sbjct: 535 QNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPL 582



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 157/364 (43%), Gaps = 37/364 (10%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G    A  L  +M+QKG VPD  T+  L++ LC  G + +A   I ++   
Sbjct: 546 VMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHRE 605

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N   Y+A + GYC+   L  AL +   M   G+  + V + +L+    K+    D 
Sbjct: 606 HFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQ---DT 662

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
               G +    D +   D +  T ++D Y K G   +A  +W+ M  +    +IV Y  L
Sbjct: 663 SAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTL 722

Query: 303 INGFCLNGDISSAFAYFCQMLK----------------------------------RGFL 328
           IN  C  G +  A   + +ML                                   +G L
Sbjct: 723 INELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLL 782

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
            + ++YN L+   CK G+++EA+     +    + PD I+Y TII   C  G++  A EF
Sbjct: 783 ANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEF 842

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
             +ML K + P+   +N +I G    G+L  AF +RD M+  GV  N  T  +L    +R
Sbjct: 843 WDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASR 902

Query: 449 GGSI 452
             SI
Sbjct: 903 KFSI 906



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 122/237 (51%), Gaps = 9/237 (3%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           LK M D       L  D   + ++I      G +  A  +   MI +G  P+++T+  L+
Sbjct: 669 LKNMHDQ-----RLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLI 723

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           NELCK G ++KA+ + +EM     +PN  TY  F+    R   ++KA+ L + M   G+ 
Sbjct: 724 NELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLL 782

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
            N V++NILV   CK G + +A K L E++   D     D IT + ++    + G+   A
Sbjct: 783 ANTVSYNILVRGFCKLGRVEEATKLLDEMI---DNAIFPDCITYSTIIYQCCRRGNLDGA 839

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
           +  W+ M  K ++ D +AYN LI G C+ G++  AF     M++RG  P+  T+ +L
Sbjct: 840 IEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSL 896



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 139/355 (39%), Gaps = 57/355 (16%)

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           IL+HAL    L   A   L                  T+L+       + F+AL    D 
Sbjct: 110 ILIHALVNANLFWPASSLL-----------------QTLLLRGGLDPREVFEALL---DC 149

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
           F+K      + +++LI  +     +  +   F  M +   +P V T   +LN L K  ++
Sbjct: 150 FEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRV 209

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           D     +G +   G+ PD   Y  +I+  C   +  KA+E +  M  +S      ++NV+
Sbjct: 210 DMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM--ESSDLNVVVYNVL 267

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET-------------------- 447
           I G  +   +  A  I++ ++  G++++  T+  L+L                       
Sbjct: 268 IHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGF 327

Query: 448 ---------------RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
                          R G + DAF L   +   G  P +F YN LI + C  G    A  
Sbjct: 328 VPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAEL 387

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           L+ EM  +G+  + +TY+ LI   C RG +  A     K+   G+ I   P+  L
Sbjct: 388 LFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSL 442


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 222/449 (49%), Gaps = 6/449 (1%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D L+ M + G V C+   D   +  VI      G +  A  L ++M+Q+G  PD +T++ 
Sbjct: 203 DLLRMMAEGGAV-CS--PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSS 259

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           +V+ LCK   ++KA+  +R+M      PN  TYN  I GY    +  +A+ +F  M    
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 319

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           I P+ VT N+L+ +LCK G + +A      +          DV +  I+++ Y   G   
Sbjct: 320 ILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQ---NPDVFSYNIMLNGYATKGCLV 376

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
               L++ M    I   I  +NVLI  +   G +  A   F +M   G  P+V+TY T++
Sbjct: 377 DMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVI 436

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             LC+ GK+D+A   +  +   GVAPD+ +Y  +IQG C HG ++KA+E +  ++   + 
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
            +  +++ II+   + G + +A +I DL ++ G+      ++ L+      G +  A  +
Sbjct: 497 LDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
              M+  GI P+   Y  L+   C +G I   L L+ EML++GI P  I Y  +I G   
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 616

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G    A+  F ++   G+A++   + I+
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMNKCTYSIV 645



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 188/354 (53%), Gaps = 2/354 (0%)

Query: 192 NAFITGYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           N  + G+C     D+AL  L       G  P+  +++IL+ +LC +G  G A   L  ++
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL-RMM 208

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
           A+     + DV+    ++D +FK GD  +A  L+ +M Q+ I  D V Y+ +++  C   
Sbjct: 209 AEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKAR 268

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A A+  QM+ +G LP+  TYN L+      G+  EA   +  + +  + PD +++ 
Sbjct: 269 AMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFN 328

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            ++  LC +G I +AR+   +M  K   P+   +N++++GY   G L +   + DLML  
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 388

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G++  + TFN LI A    G +  A  +  EM   G+ P+V TY  +I A C +G +  A
Sbjct: 389 GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDA 448

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           ++ +++M+ +G+ PD   Y  LI+G C  G++ +A+E+ ++I   G+ +D + F
Sbjct: 449 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLF 502



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 220/448 (49%), Gaps = 6/448 (1%)

Query: 124 VIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  C   +   AL  L  +  + G VPDV +++ L+  LC  G   +AD ++R M+E 
Sbjct: 152 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211

Query: 183 RP--SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               SP+   YN  I G+ +  +++KA  LF  M   GI P+ VT++ +VHALCK   + 
Sbjct: 212 GAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMD 271

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A  FL +++   +     +  T   L+  Y   G   +A+ ++ +M +++I  D+V +N
Sbjct: 272 KAEAFLRQMV---NKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFN 328

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +L+   C  G I  A   F  M  +G  PDV +YN +LN    +G L + +  + ++   
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 388

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+AP   ++  +I+     G + KA      M +  V P    +  +I    R G + +A
Sbjct: 389 GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDA 448

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
               + M+  GV+ + + ++ LI      GS+  A  L  E++ +G+  D+  ++ +I  
Sbjct: 449 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINN 508

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C LG +  A  ++D  +  G+ P  + Y+ L+ G+C  G M++A  VF  + + G+  +
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWL 568
            + +  L   Y ++   D+   + ++ L
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREML 596



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 185/406 (45%), Gaps = 7/406 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G  P + T N L+      G L+KA  +  EM +    PN  TY   I   CR+ +
Sbjct: 385 MLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGK 444

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A+  F+ M + G+ P++  ++ L+   C  G L  A + + E++  ++G     V+ 
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIM--NNGMHLDIVLF 502

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           S+I+ ++  K G    A  +++      +    V Y++L++G+CL G +  A   F  M+
Sbjct: 503 SSII-NNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMV 561

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  P+ + Y TL+N  CK G++DE    +  + + G+ P  I Y  II GL   G  V
Sbjct: 562 SAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 621

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGY--GRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
            A+     M E  +      +++++ G    RC D    F  ++L  +  V  ++ T N 
Sbjct: 622 PAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD-EAIFLFKELR-AMNVKIDIITLNT 679

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I    +   + +A  L   +   G+ P V TY+++I      G +  A  ++  M   G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             PD      +++    +  +  A    +KI     +++H+   +L
Sbjct: 740 CEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLL 785



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 141/293 (48%), Gaps = 3/293 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I +LC  G++  A  +    +  G  P  + ++ L++  C +G +EKA  V   M   
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   Y   + GYC++  +D+ L LF  M   GI+P+ + +NI++  L + G    A
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 623

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+   + G A +   T +I++   FKN    +A+ L+ ++   N++ DI+  N +
Sbjct: 624 KVKFHEM--TESGIAMNKC-TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTM 680

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G      +  A   F  + + G +P V+TY+ ++  L K+G ++EA   +  +   G 
Sbjct: 681 IAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 740

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            PD      +++ L    +IV+A  +L  + E++   E     +++D +   G
Sbjct: 741 EPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 42/263 (15%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT---GVAPDQISYKT 371
           A A+F Q+L+ G   D+I  N LL   C+  + DEA     +L +T   G  PD  SY  
Sbjct: 130 ALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI--LLHRTPELGCVPDVFSYSI 187

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLS 429
           +++ LC  G   +A + L  M E   V  P +  +N +IDG+ + GD++           
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNK---------- 237

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
                                    A  L KEM+  GI PD  TY+ ++ A C    +  
Sbjct: 238 -------------------------ACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDK 272

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A     +M+ +G+ P+  TY  LI G+ + G  KEA  VF +++   +  D + F +L  
Sbjct: 273 AEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMG 332

Query: 550 RYRRMKESDKARDIHQKWLLRNK 572
              +  +  +ARD+     ++ +
Sbjct: 333 SLCKYGKIKEARDVFDTMAMKGQ 355



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 38/260 (14%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           CL GK+  AL +   M+  G  P+ + +  LVN  CKIG +++   + REM +    P+ 
Sbjct: 545 CLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPST 604

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             YN  I G         A   F  M  +GI  N+ T++I++  L K     +A+    E
Sbjct: 605 ILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE 664

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           + A +      D+IT   ++   F+     +A  L+  + +  +   +V Y+++I     
Sbjct: 665 LRAMN---VKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIK 721

Query: 309 NG-----------------------------------DISSAFAYFCQMLKRGFLPDVIT 333
            G                                   +I  A AY  ++ +R F  + +T
Sbjct: 722 EGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 781

Query: 334 YNTLLNCLCKQGKLDEASHF 353
              L++    +G   E   F
Sbjct: 782 TMLLVDLFSSKGTCREHIRF 801


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 243/508 (47%), Gaps = 34/508 (6%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L+ L  M   G   C+   +   +  +I      G++  A +L  +MI +G  PDV+
Sbjct: 182 QEALELLLHMTADGGYNCS--PNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVV 239

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++ L++ LCK   + KA+ +++ M +    PN  TYN  I GYC + +L++A+ L   M
Sbjct: 240 TYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKM 299

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD------------GKATSDVI 262
           + +G++P+ VT+ +L+   CK G   +A      ++                G AT   +
Sbjct: 300 SGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGAL 359

Query: 263 TST--------------------ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                  IL+ +Y K+G   +A+  + +M Q  ++ D+V+Y+ +
Sbjct: 360 IDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTV 419

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+  C  G +  A  +F QM+  G  P++I++ +L++ LC  G+  +       +   G+
Sbjct: 420 IHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGI 479

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD I   TI+  LC  G +V+A++F   ++   V P    +N +IDGY   G +  +  
Sbjct: 480 HPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIK 539

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
             D M+S G+  + +T+NAL+    + G + DA +L +EM    +     T N+++    
Sbjct: 540 QFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLF 599

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G I  A +LY +M+ RG    I TY  ++ G C    + EA  +F  +++    +D  
Sbjct: 600 QAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVW 659

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLR 570
            F I+     ++   D+A+ +    +LR
Sbjct: 660 TFNIVINALLKVGRIDEAKSLFSAMVLR 687



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 197/385 (51%), Gaps = 1/385 (0%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL-FSTMANN 217
           L+   C +G L+ A        +M       T N  I G C     D A+ + F  M   
Sbjct: 100 LIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPEL 159

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G  P+  ++N L+  LC +    +A++ L  + AD     + +V++ + ++D +FK G+ 
Sbjct: 160 GYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEV 219

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +A  L+++M  +    D+V Y+ LI+G C    ++ A A    M  +G +P+  TYN +
Sbjct: 220 DKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIM 279

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +   C  G+L+EA      +S +G+ PD ++Y  +IQ  C  G   +AR    SM+ K  
Sbjct: 280 IRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQ 339

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P   I+++++ GY   G L +   + DLM+  G+      FN LI A  + G++  A +
Sbjct: 340 KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 399

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
              EM  +G+ PDV +Y+ +I   C +G +  A+  +++M+  G++P+II++T LI G C
Sbjct: 400 AFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLC 459

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHI 542
           + G  K+ EE+  ++   G+  D I
Sbjct: 460 SIGEWKKVEELAFEMINRGIHPDAI 484



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 219/487 (44%), Gaps = 77/487 (15%)

Query: 124 VIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELC------------------ 164
           +I+ LC G +   A+  + R+M + G  PDV ++N L+  LC                  
Sbjct: 135 LIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTAD 194

Query: 165 --------------------KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
                               K G+++KA  +  EM      P+  TY++ I G C+   +
Sbjct: 195 GGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAM 254

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           +KA  +   M + G+ PN  T+NI++   C  G L +AV+ L ++          DV+T 
Sbjct: 255 NKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKM---SGSGLQPDVVTY 311

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL---------------- 308
            +L+  Y K G   +A ++++ M +K  + +   Y++L++G+                  
Sbjct: 312 ILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIR 371

Query: 309 -------------------NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
                              +G +  A   F +M + G  PDV++Y+T+++ LCK G++++
Sbjct: 372 DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVED 431

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A + +  +   G++P+ IS+ ++I GLC  G+  K  E    M+ + + P+    N I+D
Sbjct: 432 AVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMD 491

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
              + G +  A    D+++  GV  NV ++N LI      G + ++      M+  G+ P
Sbjct: 492 NLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRP 551

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D +TYN L+      G +  AL LY EM R+ +    IT   ++ G    G +  A E++
Sbjct: 552 DSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELY 611

Query: 530 AKIQTLG 536
            K+   G
Sbjct: 612 MKMVDRG 618



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 226/526 (42%), Gaps = 79/526 (15%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+ M D G +  T     R +  +IR  C  G++  A+ L +KM   G  PDV+T+  L+
Sbjct: 261 LQHMFDKGVMPNT-----RTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLI 315

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATY----------------------------- 191
              CKIG   +A  V   M      PN   Y                             
Sbjct: 316 QYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIP 375

Query: 192 ------NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV-- 243
                 N  I  Y +   +DKA+  F+ M  NG+RP+ V+++ ++H LCK G + DAV  
Sbjct: 376 FEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYH 435

Query: 244 --KFLGEVLADDDGKATS----------------------------DVITSTILMDSYFK 273
             + + E L+ +    TS                            D I    +MD+  K
Sbjct: 436 FNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCK 495

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +A   ++ +    ++ ++V+YN LI+G+C  G +  +   F +M+  G  PD  T
Sbjct: 496 EGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWT 555

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN LLN   K G++++A   Y  + +  V    I+   I+ GL   G IV ARE  + M+
Sbjct: 556 YNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMV 615

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           ++        +N ++ G      +  A  + + + S     +V+TFN +I A  + G I 
Sbjct: 616 DRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRID 675

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A SL   M+L G  P V TY+L+I +    G +  +  L+  M + G   D      +I
Sbjct: 676 EAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVII 735

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDH------IPFRILKKRYRR 553
           +    +G+++ A     KI     +++       IP  + +K+Y++
Sbjct: 736 RRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLIPI-VSEKKYQK 780



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 127/268 (47%), Gaps = 4/268 (1%)

Query: 297 VAYNVLINGFCLNGDISSAF-AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           V  N LI G C       A    F +M + G+ PDV +YN L+  LC + K  EA     
Sbjct: 130 VTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLL 189

Query: 356 VLSKTG---VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            ++  G    +P+ +SY TII G    G++ KA      M+ +   P+   ++ +IDG  
Sbjct: 190 HMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLC 249

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +   ++ A +I   M   GV  N  T+N +I      G + +A  L K+M   G+ PDV 
Sbjct: 250 KAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVV 309

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY LLI   C +G    A  ++D M+R+G  P+   Y  L+ G+  +G + +  ++   +
Sbjct: 310 TYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 369

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKA 560
              G+  +H  F IL   Y +    DKA
Sbjct: 370 IRDGIPFEHRAFNILICAYAKHGAVDKA 397



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 143/281 (50%), Gaps = 11/281 (3%)

Query: 280 ALALWNDMFQKNIQTDIVAYN-----VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           A++L+N M +  +  +++A N     +LI  FC  G +  AFA F   LK G+    +T 
Sbjct: 75  AVSLFNTMARSGV--NMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTL 132

Query: 335 NTLLNCLCKQGKLDEA-SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           N L+  LC   + D+A    +  + + G  PD  SY  +I+GLC+     +A E LL M 
Sbjct: 133 NQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMT 192

Query: 394 EK---SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
                +  P    ++ IIDG+ + G++  A+ + D M+  G   +V T+++LI    +  
Sbjct: 193 ADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQ 252

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           ++  A ++ + M   G+ P+  TYN++I   C+LG +  A++L  +M   G+ PD++TY 
Sbjct: 253 AMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYI 312

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            LI+ +C  G   EA  VF  +   G   +   + IL   Y
Sbjct: 313 LLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGY 353



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 4/168 (2%)

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK-K 460
           +I  ++I  +   G L  AF+   L L  G      T N LI     G    DA  +  +
Sbjct: 95  YIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFR 154

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG---ITPDIITYTELIKGHC 517
            M   G  PDVF+YN LI   C       AL+L   M   G    +P++++Y+ +I G  
Sbjct: 155 RMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFF 214

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
             G + +A  +F ++   G   D + +  L     + +  +KA  I Q
Sbjct: 215 KEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQ 262


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 219/436 (50%), Gaps = 10/436 (2%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I  LC   +I  A  L  +M+ +G  P+  T+  L++ LC++G +++A  ++ ++    P
Sbjct: 294 IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV----P 349

Query: 185 SPNCATYNAFITGYCRVNELDKALHLF-STMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           +PN   +N  I GY     LD+A  +   +M + G  P+  T+N L+  LCKKG L  A 
Sbjct: 350 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 409

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + + E+          +VIT TIL+D + K G   +A  + ++M  K +  + V YN LI
Sbjct: 410 ELMNEMQIKG---CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLI 466

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C +  +  A   F  M  +G  PD+ T+N+L+  LCK  K +EA   Y  +   GV 
Sbjct: 467 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 526

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            + I+Y T+I      G + +A + +  ML +    +   +N +I    R G++    ++
Sbjct: 527 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 586

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M+S G++ N  + N LI    R G+I  A    ++M+  G+ PD+ TYN LI   C 
Sbjct: 587 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCK 646

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G    AL L+D++   GI PD ITY  LI  HC  G   +A  + ++    G   + + 
Sbjct: 647 TGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVT 706

Query: 544 FRILKKRYRRMKESDK 559
           + IL   +  +KE D+
Sbjct: 707 WYILVSNF--IKEGDQ 720



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 219/454 (48%), Gaps = 29/454 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            V++ LCL  ++ +A  L + M + G VP+ + +  L++ L K+G + +   ++ EM  M
Sbjct: 222 VVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLM 281

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  T+N  I G C++  + +A  L   M   G  PN  T+ +L+H LC+ G + +A
Sbjct: 282 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 341

Query: 243 VKFLGEVLAD------------------DDGKAT-----------SDVITSTILMDSYFK 273
              L +V                     D+ KA             D+ T   L+    K
Sbjct: 342 RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCK 401

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G    A  L N+M  K  + +++ Y +LI+ FC  G +  A     +M  +G   + + 
Sbjct: 402 KGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG 461

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN L++ LCK  K+ +A + +G +S  G  PD  ++ ++I GLC      +A      ML
Sbjct: 462 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 521

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            + V+     +N +I  + R G +  A  + + ML  G   +  T+N LI A  R G+I 
Sbjct: 522 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 581

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
              +L ++M+  G+ P+  + N+LI   C  G+I  AL+   +M+ RG+TPDI+TY  LI
Sbjct: 582 KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLI 641

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G C  G  +EA  +F K+Q  G+  D I +  L
Sbjct: 642 NGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 675



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 174/373 (46%), Gaps = 41/373 (10%)

Query: 82  NPQAV-FNAL--DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
           NP  V FN L    + +  LD  K +     +      D   +  +I  LC  G + +A 
Sbjct: 350 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 409

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            L  +M  KG  P+V+T+  L++  CK G LE+A +V+ EMS    + N   YN  I+  
Sbjct: 410 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 469

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK----------------------- 235
           C+  ++  AL++F  M++ G +P+  T N L+  LCK                       
Sbjct: 470 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 529

Query: 236 ------------KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
                       +G + +A+K + ++L         D IT   L+ +  + G+  + LAL
Sbjct: 530 ITYNTLIHAFLRRGAMQEALKLVNDMLFRG---CPLDDITYNGLIKALCRAGNIEKGLAL 586

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           + DM  K +  + ++ N+LING C  G+I  A  +   M+ RG  PD++TYN+L+N LCK
Sbjct: 587 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCK 646

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G+  EA + +  L   G+ PD I+Y T+I   C  G    A   L   ++   +P    
Sbjct: 647 TGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVT 706

Query: 404 WNVIIDGYGRCGD 416
           W +++  + + GD
Sbjct: 707 WYILVSNFIKEGD 719



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 193/430 (44%), Gaps = 15/430 (3%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           QKG       +  L+++L   G+ +  D ++ +M +       + +   +  Y R     
Sbjct: 104 QKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPG 163

Query: 206 KALHLFSTMAN-NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD-VIT 263
           +A  L   M       P   ++N+++  L    L G+  K +  V  +   K  S  V T
Sbjct: 164 QATRLLLDMRGVYSCEPTFRSYNVVLDVL----LAGNCPKVVPNVFYEMLSKGISPTVYT 219

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             ++M +     +   A AL  DM +     + + Y  LI+     G ++       +ML
Sbjct: 220 FGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEML 279

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G +PDV T+N  ++ LCK  ++ EA+     +   G  P+  +Y  ++ GLC  G + 
Sbjct: 280 LMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVD 339

Query: 384 KAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFN 440
           +AR  L      + VP P++  +N +I+GY   G L  A ++  + MLS G   ++FT+N
Sbjct: 340 EARMLL------NKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYN 393

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            LIL   + G +  A  L  EM + G  P+V TY +LI   C  G +  A  + DEM  +
Sbjct: 394 TLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK 453

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G+  + + Y  LI   C    +++A  +F  + + G   D   F  L     ++ + ++A
Sbjct: 454 GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEA 513

Query: 561 RDIHQKWLLR 570
             ++Q  LL 
Sbjct: 514 LGLYQDMLLE 523


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 215/432 (49%), Gaps = 17/432 (3%)

Query: 138 LW-LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           LW +  +MI  G  P V+T   L++  C+ GDL +A  +  EM      P    Y   I 
Sbjct: 166 LWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIR 225

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C  N++++A  +   M   G+ PN  T+N L+   CK      A++   ++L +    
Sbjct: 226 GLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEG--- 282

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              DV+T  IL+D   K G+   A  L+ +M + ++  +I  YN LI+ +C  GD+S A 
Sbjct: 283 LVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAM 342

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           A F ++ +    PDV TY+ L+  LC   + +EA + +  ++K G+  + ++Y ++I G 
Sbjct: 343 ALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGC 402

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G + KA E    M E  V P    ++ +IDGY +  +L  A  I   M+   +S +V
Sbjct: 403 CKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDV 462

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+ A+I    + GS+ +A  L  +ML +GI P+ +T + L+   C  G I  AL+L+ E
Sbjct: 463 VTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTE 522

Query: 497 MLR----------RGITPDI---ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            +            G  P +   + YT LI G C  G   +A ++F+ ++  GL  D + 
Sbjct: 523 KIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVI 582

Query: 544 FRILKKRYRRMK 555
           + ++ +   ++K
Sbjct: 583 YVVMLRGLFQVK 594



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 216/472 (45%), Gaps = 18/472 (3%)

Query: 60  VGDQCRSKTRHWFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYR 119
           VG +  S  R+   N    N       ++A  L   E L RLK+ + T  V   L     
Sbjct: 69  VGSKLLSHARYLL-NDLVQNLVKSHKPYHACQLAFSE-LSRLKSSKFTPNVYGELIIVLC 126

Query: 120 RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
           +   V   L +  K+G AL ++               N L+  L K G  E    +  EM
Sbjct: 127 KMELVEEALSMYHKVGAALTIQ-------------ACNVLLYVLVKTGRFELLWRIYEEM 173

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
                SP+  T+   I G CR  +L +A  +F  M   GI P  + + IL+  LC    +
Sbjct: 174 ISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKI 233

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +A        A  +     +V T   LMD Y K  +  QAL L+ DM  + +  D+V +
Sbjct: 234 EEAESMHR---AMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTF 290

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
            +LI+G C  G++ +A   F  M+K    P++  YN+L++  CK G + EA   +  L +
Sbjct: 291 GILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELER 350

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
             V+PD  +Y  +I+GLC      +A      M ++ ++     +N +IDG  + G +  
Sbjct: 351 FEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDK 410

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  I   M   GV  NV TF+ LI    +  ++  A  +  EM++  + PDV TY  +I 
Sbjct: 411 ALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMID 470

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
             C  G +  AL+LY +ML  GITP+  T + L+ G C  G + +A E+F +
Sbjct: 471 GHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTE 522



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 206/451 (45%), Gaps = 53/451 (11%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G +  A  +  +M  KG VP V+ +  L+  LC    +E+A+ + R M E+ 
Sbjct: 188 LIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVG 247

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYN  + GYC++    +AL L+  M   G+ P+ VT  IL+  LCK G +  A 
Sbjct: 248 VYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAAR 307

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
                ++       T ++     L+D+Y K GD  +A+AL+ ++ +  +  D+  Y++LI
Sbjct: 308 NLFVNMI---KFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILI 364

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C       A   F +M K G L + +TYN+L++  CK+GK+D+A      +++ GV 
Sbjct: 365 RGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVE 424

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ I++ T+I G C   ++  A      M+ KS+ P+   +  +IDG+ + G +  A  +
Sbjct: 425 PNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKL 484

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE---------------------- 461
              ML  G++ N +T + L+    + G I DA  L  E                      
Sbjct: 485 YSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTN 544

Query: 462 ----------MLLDGIF----------------PDVFTYNLLIGASCNLGHIHLALQLYD 495
                     +  DG F                PD   Y +++     + +I   + L+ 
Sbjct: 545 HVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI--LMMLHA 602

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           +ML+ G+ P+   +  L + +   G +K A+
Sbjct: 603 DMLKFGVIPNSAVHVILCECYQESGFLKSAQ 633



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 184/366 (50%), Gaps = 10/366 (2%)

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A    S + ++   PN   +  L+  LCK  L+ +A+    +V       A   +    +
Sbjct: 101 AFSELSRLKSSKFTPN--VYGELIIVLCKMELVEEALSMYHKV------GAALTIQACNV 152

Query: 267 LMDSYFKNGDKFQAL-ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           L+    K G +F+ L  ++ +M    +   ++ +  LI+G C  GD+  A   F +M  +
Sbjct: 153 LLYVLVKTG-RFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVK 211

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G +P VI Y  L+  LC   K++EA   +  + + GV P+  +Y T++ G C   +  +A
Sbjct: 212 GIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQA 271

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
                 ML + +VP+   + ++IDG  + G++  A ++   M+ F V+ N+  +N+LI A
Sbjct: 272 LRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDA 331

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G + +A +L  E+    + PDVFTY++LI   C++     A  ++++M + GI  +
Sbjct: 332 YCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILAN 391

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            +TY  LI G C  G M +A E+ +++   G+  + I F  L   Y +++    A  I+ 
Sbjct: 392 SVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYS 451

Query: 566 KWLLRN 571
           + ++++
Sbjct: 452 EMVIKS 457


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 230/447 (51%), Gaps = 3/447 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G I  A  +  K+++ G VPD +T   L+  LC  G +++A     ++  + 
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALG 185

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  +Y   I G C+V E   AL L   +  N ++PN V +N ++ ++CK  L+ +A 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+++      + DV+T + L+  +   G    A+ L+N M  +NI+ D+  +N+L+
Sbjct: 246 DLFSEMISKG---ISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILV 302

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           N FC +G +      F  M+K+G  P+ +TYN+L++  C   ++++A   +  +++ GV 
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVN 362

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  SY  +I G C      +A      M  K+++P+   ++ +IDG  + G +S A  +
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M   GV   + T+N+++ A  +   +  A +L  ++   GI P+++TY++LI   C 
Sbjct: 423 VDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQ 482

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A ++++ +L +G   ++ TYT +I+G C  G   EA  + +K++  G   D   
Sbjct: 483 SGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKT 542

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           + I+     +  E+D A  + ++ + R
Sbjct: 543 YEIIILSLFKKDENDMAEKLLREMIAR 569



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 210/401 (52%), Gaps = 3/401 (0%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T L+L +KM  +G  P+++  N L+N  C++G +  A  V  ++ +M   P+  T+   I
Sbjct: 103 TVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLI 162

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   ++ +A      +   G   +++++  L+H LCK G    A+  L  V   D  
Sbjct: 163 KGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV---DGN 219

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               +V+    ++DS  K     +A  L+++M  K I  D+V Y+ LI+GFC+ G ++ A
Sbjct: 220 LVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDA 279

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F +M+     PDV T+N L+N  CK GK+ E    + ++ K G+ P+ ++Y +++ G
Sbjct: 280 IDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDG 339

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C+  ++ KA+    +M +  V P+   ++++I+G+ +      A ++   M    +  +
Sbjct: 340 YCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD 399

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           V T+++LI   ++ G I  A  L  +M   G+ P + TYN ++ A C +  +  A+ L  
Sbjct: 400 VVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLT 459

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           ++  +GI P++ TY+ LIKG C  G +++A +VF  +   G
Sbjct: 460 KLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKG 500



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 218/428 (50%), Gaps = 3/428 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I+ LCL G+I  A     K++  G   D +++  L++ LCK+G+   A  +++ +   
Sbjct: 160 TLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGN 219

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   YN  I   C+V  +++A  LFS M + GI P+ VT++ L+   C  G L DA
Sbjct: 220 LVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDA 279

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    +++ ++      DV T  IL++++ K+G   +   +++ M ++ I+ + V YN L
Sbjct: 280 IDLFNKMILEN---IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSL 336

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+CL  +++ A + F  M + G  PD+ +Y+ ++N  CK  K DEA + +  + +  +
Sbjct: 337 MDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNI 396

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y ++I GL   G I  A + +  M ++ V P    +N I+D   +   +  A +
Sbjct: 397 IPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIA 456

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   +   G+  N++T++ LI    + G + DA  + + +L+ G   +V TY ++I   C
Sbjct: 457 LLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFC 516

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G  + AL L  +M   G  PD  TY  +I     +     AE++  ++   G+    I
Sbjct: 517 VEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQI 576

Query: 543 PFRILKKR 550
                KK+
Sbjct: 577 AIWFQKKK 584



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 177/331 (53%), Gaps = 3/331 (0%)

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DAV     +L  +    T        ++ S  K+      L L   M  + I+ ++V  N
Sbjct: 68  DAVSLFNRLLRRN---TTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LIN FC  G I  AF+ F ++LK G++PD IT+ TL+  LC +G++ +A  F+  +   
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVAL 184

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G   DQISY T+I GLC  G+   A + L  +    V P   ++N IID   +   ++ A
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           F +   M+S G+S +V T++ALI      G + DA  L  +M+L+ I PDV+T+N+L+ A
Sbjct: 245 FDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNA 304

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  G +     ++D M+++GI P+ +TY  L+ G+C    + +A+ +F  +   G+  D
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD 364

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
              + I+   + ++K+ D+A ++ ++   +N
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 177/371 (47%), Gaps = 3/371 (0%)

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           D++ A  +   +     +P    +N  +    +       L+L   M   GI+PN V  N
Sbjct: 65  DVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           IL++  C+ GL+  A     ++L         D IT T L+      G   QA    + +
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILK---MGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKV 181

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
                  D ++Y  LI+G C  G+  +A     ++      P+V+ YNT+++ +CK   +
Sbjct: 182 VALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLV 241

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           +EA   +  +   G++PD ++Y  +I G CI G +  A +    M+ +++ P+ + +N++
Sbjct: 242 NEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNIL 301

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           ++ + + G +    ++ D+M+  G+  N  T+N+L+        +  A S+   M   G+
Sbjct: 302 VNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV 361

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PD+ +Y+++I   C +     A+ L+ EM R+ I PD++TY+ LI G    G +  A +
Sbjct: 362 NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQ 421

Query: 528 VFAKIQTLGLA 538
           +  ++   G+ 
Sbjct: 422 LVDQMHDRGVP 432



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 156/316 (49%), Gaps = 8/316 (2%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           ++ E  D    M   G     +  D   + A+I   C+ GK+  A+ L  KMI +   PD
Sbjct: 240 LVNEAFDLFSEMISKG-----ISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPD 294

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V T N LVN  CK G +++   V   M +    PN  TYN+ + GYC V E++KA  +F+
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFN 354

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
           TMA  G+ P+  +++I+++  CK     +A+    E+   +      DV+T + L+D   
Sbjct: 355 TMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN---IIPDVVTYSSLIDGLS 411

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K+G    AL L + M  + +   I  YN +++  C    +  A A   ++  +G  P++ 
Sbjct: 412 KSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMY 471

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TY+ L+  LC+ GKL++A   +  L   G   +  +Y  +IQG C+ G   +A   L  M
Sbjct: 472 TYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKM 531

Query: 393 LEKSVVPEPHIWNVII 408
            +   +P+   + +II
Sbjct: 532 EDNGCIPDAKTYEIII 547



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 76/151 (50%)

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
           D+ +A S+ + +L    +   F FN ++ +  +         L ++M   GI P++   N
Sbjct: 65  DVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           +LI   C LG I  A  ++ ++L+ G  PD IT+T LIKG C +G +++A     K+  L
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVAL 184

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           G   D I +  L     ++ E+  A D+ Q+
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQR 215



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 69/133 (51%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R + +++  LC   ++  A+ L  K+  KG  P++ T++ L+  LC+ G LE A  V   
Sbjct: 436 RTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEG 495

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           +     + N  TY   I G+C     ++AL L S M +NG  P+  T+ I++ +L KK  
Sbjct: 496 LLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDE 555

Query: 239 LGDAVKFLGEVLA 251
              A K L E++A
Sbjct: 556 NDMAEKLLREMIA 568


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 224/449 (49%), Gaps = 12/449 (2%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D+ L + ++  + M  T P    +  D+ R ++ I  +    K    + L +KM   G  
Sbjct: 63  DIKLHDAINLFREMVKTRPFPSIV--DFNRLLSAIVKM---KKYDVVISLGKKMEVLGIR 117

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
            D+ T N ++N  C    +  A  V+ +M ++   P+  T  + + G+CR N +  A+ L
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA--TSDVITSTILM 268
              M   G RP+ V +N ++ +LCK   + DA+ F  E+     G+     +V+T T L+
Sbjct: 178 VDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEI-----GRKGIRPNVVTYTALV 232

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           +    +G    A  L  DM ++ I  +++ Y+ L++ F  NG +  A   F +M++    
Sbjct: 233 NGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSID 292

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           PD++TY++L+N LC   ++DEA+  + ++   G  PD +SY T+I G C    +    + 
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKL 352

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              M ++ +V     +N +I G+ + GD+  A      M SFGVS +++T+N L+     
Sbjct: 353 FRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCD 412

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +  A  + ++M    +  D+ TY  +I   C  G +  A  L+  +  +G+ PDI+T
Sbjct: 413 NGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVT 472

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           YT ++ G C +G   E E ++ K++  GL
Sbjct: 473 YTTMMSGLCTKGLQHEVEALYTKMKQEGL 501



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 213/412 (51%), Gaps = 3/412 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K+  A+ L R+M++    P ++  N L++ + K+   +    + ++M  +    +  T+N
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I  +C   ++  AL +   M   G  P+RVT   LV+  C++  + DAV  + +++  
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV-- 182

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
            +     D++    ++DS  K      AL  + ++ +K I+ ++V Y  L+NG C +G  
Sbjct: 183 -EIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           + A      M+KR   P+VITY+ LL+   K GK+ EA   +  + +  + PD ++Y ++
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I GLC+H  I +A +    M+ K   P+   +N +I+G+ +   + +   +   M   G+
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGL 361

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
            +N  T+N LI    + G +  A     +M   G+ PD++TYN+L+G  C+ G +  AL 
Sbjct: 362 VNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           ++++M +  +  DI+TYT +I+G C  G +++A  +F  +   GL  D + +
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTY 473



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 181/379 (47%), Gaps = 38/379 (10%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           L  A ++ REM + RP P+   +N  ++   ++ + D  + L   M   GIR +  T NI
Sbjct: 66  LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           +++  C    +  A+  LG+                                      M 
Sbjct: 126 VINCFCCCFQVSLALSVLGK--------------------------------------ML 147

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           +   + D V    L+NGFC    +S A +   +M++ G+ PD++ YN +++ LCK  +++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVN 207

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           +A  F+  + + G+ P+ ++Y  ++ GLC  G    A   L  M+++ + P    ++ ++
Sbjct: 208 DALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALL 267

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           D + + G +  A  I + M+   +  ++ T+++LI        I +A  +   M+  G F
Sbjct: 268 DAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCF 327

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PDV +YN LI   C    +   ++L+ +M +RG+  + +TY  LI+G    G++ +A+E 
Sbjct: 328 PDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEF 387

Query: 529 FAKIQTLGLAIDHIPFRIL 547
           F+++ + G++ D   + IL
Sbjct: 388 FSQMDSFGVSPDIWTYNIL 406



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 150/292 (51%), Gaps = 9/292 (3%)

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G K + L + ND++          +N++IN FC    +S A +   +MLK G+ PD +T 
Sbjct: 108 GKKMEVLGIRNDLY---------TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTI 158

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
            +L+N  C++ ++ +A      + + G  PD ++Y  II  LC    +  A +F   +  
Sbjct: 159 GSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGR 218

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K + P    +  +++G    G  ++A  +   M+   ++ NV T++AL+ A  + G + +
Sbjct: 219 KGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLE 278

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  + +EM+   I PD+ TY+ LI   C    I  A Q++D M+ +G  PD+++Y  LI 
Sbjct: 279 AKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLIN 338

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           G C    +++  ++F K+   GL  + + +  L + + ++ + DKA++   +
Sbjct: 339 GFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQ 390



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 116/223 (52%), Gaps = 7/223 (3%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR +++ D   + ++I  LCL  +I  A  +   M+ KG  PDV+++N L+N  CK   +
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRV 346

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E    + R+MS+     N  TYN  I G+ +V ++DKA   FS M + G+ P+  T+NIL
Sbjct: 347 EDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNIL 406

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSD--VITSTILMDSYFKNGDKFQALALWNDM 287
           +  LC  GLL  A+     V+ +D  K+  D  ++T T ++    K G    A  L+  +
Sbjct: 407 LGGLCDNGLLEKAL-----VIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSL 461

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K ++ DIV Y  +++G C  G      A + +M + G + +
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN 504


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 136/437 (31%), Positives = 221/437 (50%), Gaps = 20/437 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR  C  G+   AL   R + +    PDV   N+L++ L K G+ ++A  +   M   R
Sbjct: 68  LIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSR 127

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR--PNRVTHNILVHA-LCKKGLLG 240
            +P+  TYN  I+G C+   L+KA  L   M   G +  P+ VT+N L++A +CK G + 
Sbjct: 128 VNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVE 187

Query: 241 DAVKFL-GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           +A++ L G  LA   G A  DVIT   ++ +    G   +A  +   M   +   D+V +
Sbjct: 188 EALEILDGMKLA---GPA-PDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTF 240

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N L++GFC  G +  A     +M +   LPDVITY  L+N LC+ G++  A +    + +
Sbjct: 241 NTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVR 300

Query: 360 TGVAPDQISYKTIIQGLCIHGDI---------VKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            G  PD I+Y +++ GLC  G+I         + ARE L  M+  ++VP    +N+++ G
Sbjct: 301 QGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGG 360

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             + G +S A S+   +++ G   +V T+N LI    +   + +A  L  EM   G FP+
Sbjct: 361 LIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPN 420

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             T   ++   C +G +  A  L  EM R+   P+++ YT LI G C    M +A  V  
Sbjct: 421 DVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLD 480

Query: 531 KIQTLGLAIDHIPFRIL 547
            ++  G+A+D   +R L
Sbjct: 481 AMRGQGVALDDFAYRKL 497



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 211/430 (49%), Gaps = 18/430 (4%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM--RPSPNCA 189
           G    A+ L   M      PD+ T+N +++ LCK G+LEKA  ++ EM     + +P+  
Sbjct: 111 GNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIV 170

Query: 190 TYNAFI-TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
           TYN  I  G C+  ++++AL +   M   G  P+ +T+N ++HALC  G + +A + L  
Sbjct: 171 TYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKT 230

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +        + D++T   L+D + K G   +AL +  +M ++NI  D++ Y +L+NG C 
Sbjct: 231 M------SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 284

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS---------K 359
            G +  AF    +++++G++PDVI Y +L++ LCK G+++EA      +S          
Sbjct: 285 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVS 344

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
             + P   +Y  ++ GL   G I KA   +  ++ +  VP+   +N +IDG  +   +  
Sbjct: 345 INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVRE 404

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  + D M S G   N  T  +++    R G + DA+SL  EM      P+V  Y  LI 
Sbjct: 405 ACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLID 464

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C    +  A  + D M  +G+  D   Y +LI      G + EA  ++ ++   G   
Sbjct: 465 GLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLP 524

Query: 540 DHIPFRILKK 549
           D    + L++
Sbjct: 525 DGSTSKTLEE 534



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 202/403 (50%), Gaps = 18/403 (4%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           Q G   DV ++N+L++ L K G   +   V +++     SPN  T+   I G C+  +  
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAT 79

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +AL     +    + P+    N L+H L K G    AVK    +   +  +   D+ T  
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENM---ESSRVNPDIFTYN 136

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQT--DIVAYNVLIN-GFCLNGDISSAFAYFCQM 322
            ++    K+G+  +A  L  +M ++  ++  DIV YN LIN G C +GD+  A      M
Sbjct: 137 TVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGM 196

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
              G  PDVITYN++++ LC  G++ EA+    +L     +PD +++ T++ G C  G +
Sbjct: 197 KLAGPAPDVITYNSIIHALCVAGRVVEAAE---ILKTMSCSPDLVTFNTLLDGFCKAGML 253

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A E L  M  ++++P+   + ++++G  R G +  AF + + ++  G   +V  + +L
Sbjct: 254 PRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSL 313

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIF---------PDVFTYNLLIGASCNLGHIHLALQL 493
           +    + G I +A  L KEM    I          P +FTYN+++G     G I  A+ L
Sbjct: 314 VDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSL 373

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
             +++ RG  PD++TY  LI G C    ++EA ++  ++ +LG
Sbjct: 374 ISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLG 416



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 186/363 (51%), Gaps = 15/363 (4%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           +C  G +  AL +   M   G  PDV+T+N +++ LC  G + +A  +++ MS    SP+
Sbjct: 180 ICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---CSPD 236

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             T+N  + G+C+   L +AL +   M    I P+ +T+ ILV+ LC+ G +  A   L 
Sbjct: 237 LVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLE 296

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA--------- 298
           E++         DVI  T L+D   K+G+  +A  L  +M  + I  ++V+         
Sbjct: 297 EIVRQ---GYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFT 353

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           YN+++ G   +G IS A +    ++ RG++PDV+TYNTL++ LCK  ++ EA      ++
Sbjct: 354 YNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMA 413

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G  P+ ++  +++ GLC  G +  A   ++ M  K   P   ++  +IDG  +   + 
Sbjct: 414 SLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMD 473

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           +A  + D M   GV+ + F +  LI++   GG + +A ++  EM+  G  PD  T   L 
Sbjct: 474 DACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLE 533

Query: 479 GAS 481
            A+
Sbjct: 534 EAA 536



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 121/225 (53%), Gaps = 6/225 (2%)

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G+  DV +YN LL+ L K G        Y  L  +G +P+ +++K +I+G C  G   +A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            EFL ++ E SV P+ +I+N +I G  + G+   A  + + M S  V+ ++FT+N +I  
Sbjct: 82  LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141

Query: 446 ETRGGSIFDAFSLKKEMLLDG--IFPDVFTYNLLIGAS-CNLGHIHLALQLYDEMLRRGI 502
             + G++  A  L +EM+  G    PD+ TYN LI A  C  G +  AL++ D M   G 
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP 201

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            PD+ITY  +I   C  G + EA E+   ++T+  + D + F  L
Sbjct: 202 APDVITYNSIIHALCVAGRVVEAAEI---LKTMSCSPDLVTFNTL 243



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 125/265 (47%), Gaps = 12/265 (4%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++  LC  G++  A +L  +++++G +PDV+ +  LV+ LCK G++E+A  ++
Sbjct: 271 DVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLV 330

Query: 177 REMS---------EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           +EMS          +   P   TYN  + G  +   + KA+ L S +   G  P+ VT+N
Sbjct: 331 KEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYN 390

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            L+  LCK   + +A     E+ +   G   +DV   +++     + G    A +L  +M
Sbjct: 391 TLIDGLCKANRVREACDLADEMAS--LGCFPNDVTLGSVVF-GLCRVGRVDDAWSLVVEM 447

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            +K    ++V Y  LI+G C +  +  A      M  +G   D   Y  L+  +   G++
Sbjct: 448 SRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRV 507

Query: 348 DEASHFYGVLSKTGVAPDQISYKTI 372
            EA   Y  +   G  PD  + KT+
Sbjct: 508 AEAMAMYDEMVARGFLPDGSTSKTL 532


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 211/441 (47%), Gaps = 12/441 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE        +I   C   ++  A  L R+M +K   P V T   L+  LC   ++ +A 
Sbjct: 459 LEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEAS 518

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM E +  P   TYN  I GYC+ + +DKA  L   M +NG+ P+  T+  L+  L
Sbjct: 519 KLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGL 578

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDV--ITSTILMDSYFKNGDKFQALALWNDMFQKN 291
           C  G +  A  F+     DD  K    +  +  + L+  Y   G   +AL+   +M Q+ 
Sbjct: 579 CSTGRVSAAKDFI-----DDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRG 633

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           I  D+V + VLI+G     D+   F    +M  +G  PD + Y ++++   K+G   ++ 
Sbjct: 634 INMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSG 693

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
               ++      P+ ++Y   + GLC  G+I +A      ML  ++ P    +   +D  
Sbjct: 694 ECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSL 753

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            + G++  A  +   ML  G+ +N  T+N LI    + G + +A  +  EM  +GIFPD 
Sbjct: 754 TKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDC 812

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TY+ +I   C  G +  A++L+D MLR+G+ PD + +  LI G C  G + +A E+   
Sbjct: 813 ITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRND 872

Query: 532 IQTLGLAIDHIPFRILKKRYR 552
           + + GL     P +IL+ + R
Sbjct: 873 MLSRGLK----PRQILQLQKR 889



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 214/428 (50%), Gaps = 10/428 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G +  A +L  KMI +G  P   T   L++  CK   +EKA  + REM+E 
Sbjct: 433 SLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEK 492

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  T+ A I G C  NE+ +A  LF  M    I+P  VT+N+++   CK   +  A
Sbjct: 493 EIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKA 552

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L ++L +       D  T   L+      G    A    +D+ +KN++ + + Y+ L
Sbjct: 553 FELLEDMLHNG---LVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSAL 609

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK--- 359
           ++G+C  G ++ A +  C+M++RG   D++ +  L++   KQ    +    +G+L K   
Sbjct: 610 LHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQ---QDMKRLFGLLKKMYD 666

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ PD + Y ++I      G   K+ E L  M+ +   P    +   ++G  + G++  
Sbjct: 667 QGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDR 726

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  + + ML+  +S N  T+   + + T+ G++ +A  L  EML  G+  +  TYN+LI 
Sbjct: 727 AGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIR 785

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C LG +  A ++  EM   GI PD ITY+ +I  HC  G++  A E++  +   G+  
Sbjct: 786 GFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEP 845

Query: 540 DHIPFRIL 547
           D + F +L
Sbjct: 846 DSVAFNLL 853



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 209/437 (47%), Gaps = 3/437 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I +A  L  K+ + G +P++  +N L+N LCK  DL+KA+ + + M  M    N  TY
Sbjct: 337 GNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTY 396

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  I  +C+   LD A   F  M  +GIR     +N L++  CK G L  A +FL   + 
Sbjct: 397 SILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLS-AAEFLYTKMI 455

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
           ++  + T+   T T L+  Y K+    +A  L+ +M +K I   +  +  LI G C   +
Sbjct: 456 NEGLEPTA--TTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNE 513

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           ++ A   F +M++R   P  +TYN ++   CK   +D+A      +   G+ PD  +Y+ 
Sbjct: 514 MAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRP 573

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC  G +  A++F+  + +K++      ++ ++ GY   G L+ A S    M+  G
Sbjct: 574 LISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRG 633

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           ++ ++     LI    +   +   F L K+M   G+ PD   Y  +I A    G    + 
Sbjct: 634 INMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSG 693

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +  D M+     P+++TYT  + G C  G +  A  +F K+ T  ++ + + +       
Sbjct: 694 ECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSL 753

Query: 552 RRMKESDKARDIHQKWL 568
            +     +A D+H + L
Sbjct: 754 TKEGNMKEATDLHHEML 770



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 205/443 (46%), Gaps = 13/443 (2%)

Query: 123 AVIRDLCLGGKIGTA----LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           AVIR LC       A    LW+            ++T+N L++ LCK G + +A  V + 
Sbjct: 223 AVIRSLCELKDFCRAKEKILWMESNRFD----LSIVTYNVLIHGLCKGGGVLEALEVRKS 278

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           + E     +  TY   + G+CRV + D  + L + M   G  P     + LV  L KKG 
Sbjct: 279 LREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGN 338

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           +  A      V+         ++     L+++  K  D  +A  L+ +M   N+  + V 
Sbjct: 339 IDSAYDL---VVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVT 395

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y++LI+ FC  G +  A +YF +M++ G    +  YN+L+N  CK G L  A   Y  + 
Sbjct: 396 YSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMI 455

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G+ P   ++ T+I G C    + KA +    M EK + P  + +  +I G     +++
Sbjct: 456 NEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMA 515

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  + D M+   +     T+N +I    +  ++  AF L ++ML +G+ PD +TY  LI
Sbjct: 516 EASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLI 575

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C+ G +  A    D++ ++ +  + + Y+ L+ G+C +G + EA     ++   G+ 
Sbjct: 576 SGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGIN 635

Query: 539 IDHIPFRILKKRYRRMKESDKAR 561
           +D +   +L      MK+ D  R
Sbjct: 636 MDLVCHAVLID--GAMKQQDMKR 656



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 207/444 (46%), Gaps = 7/444 (1%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           ++  A+ + R M+    +P+V T + ++N L +I        V  E       P+  T +
Sbjct: 163 RVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCS 222

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
           A I   C + +  +A      M +N    + VT+N+L+H LCK G + +A++    +   
Sbjct: 223 AVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSL--- 279

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
            +     DV+T   L+  + +       + L N+M +        A + L++G    G+I
Sbjct: 280 REKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNI 339

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
            SA+    ++ + GFLP++  YN L+N LCK   LD+A   Y  +    +  + ++Y  +
Sbjct: 340 DSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSIL 399

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I   C  G +  A  +   M+E  +    + +N +I+G+ + GDLS A  +   M++ G+
Sbjct: 400 IDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGL 459

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
                TF  LI    +   +  AF L +EM    I P V+T+  LI   C+   +  A +
Sbjct: 460 EPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASK 519

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY- 551
           L+DEM+ R I P  +TY  +I+G+C   NM +A E+   +   GL  D   +R L     
Sbjct: 520 LFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLC 579

Query: 552 ---RRMKESDKARDIHQKWLLRNK 572
              R     D   D+H+K L  N+
Sbjct: 580 STGRVSAAKDFIDDLHKKNLKLNE 603



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++   C  G++  AL    +MIQ+G   D++ H  L++   K  D+++   ++++M 
Sbjct: 606 YSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMY 665

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    P+   Y + I  Y +     K+      M      PN VT+   ++ LCK G + 
Sbjct: 666 DQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEID 725

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A     ++L       + + +T    +DS  K G+  +A  L ++M  K +  +   YN
Sbjct: 726 RAGHLFEKMLT---ANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYN 781

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI GFC  G +  A     +M + G  PD ITY+T++   C+ G +  A   +  + + 
Sbjct: 782 ILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRK 841

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP---------HIWNVIIDGY 411
           GV PD +++  +I G C++G + KA E    ML + + P            + N ++ G 
Sbjct: 842 GVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGG 901

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
              G++  A  +   ML+  V  ++  +  L L
Sbjct: 902 CVTGEVDTALRLYHSMLTRAVKLSLEMWKCLYL 934



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 158/388 (40%), Gaps = 49/388 (12%)

Query: 228 ILVHALCKKGLL-------------GDAVKFLGEVLADDDGKAT-SDVITSTILMDSYFK 273
           ILVHAL +  L              G   KF+ E   +   +   S  +    L+ SY +
Sbjct: 101 ILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTLGFDFLVHSYLQ 160

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD--- 330
           N   F A+ +   M    +  ++   + ++NG          +  F + +  G  PD   
Sbjct: 161 NTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYT 220

Query: 331 --------------------------------VITYNTLLNCLCKQGKLDEASHFYGVLS 358
                                           ++TYN L++ LCK G + EA      L 
Sbjct: 221 CSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLR 280

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           + G+  D ++Y T++ G C           +  M+E   VP     + ++DG  + G++ 
Sbjct: 281 EKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNID 340

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           +A+ +   +  FG   N+F +NALI A  +G  +  A  L K M    +  +  TY++LI
Sbjct: 341 SAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILI 400

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            + C  G + +A   +  M+  GI   I  Y  LI GHC  G++  AE ++ K+   GL 
Sbjct: 401 DSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLE 460

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQK 566
                F  L   Y +  + +KA  ++++
Sbjct: 461 PTATTFTTLISGYCKDLQVEKAFKLYRE 488


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 234/503 (46%), Gaps = 43/503 (8%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           ++ MR+TG   C+L  +   +  +I  LC  G I  A   +++M   G VPD  T+  ++
Sbjct: 266 VEEMRETG---CSL--NVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAII 320

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           N LCK G  ++A  ++ EMS     PN   Y+  I G+ R    D+A  +   M+  G++
Sbjct: 321 NGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQ 380

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           PN++T++ L+  LCK G +G A + L ++         +D +T  ++++ + +  +K +A
Sbjct: 381 PNKITYDNLIRGLCKLGRMGRASRILKQMTKIG---YMADTMTYNLVIEGHLRQHNKEEA 437

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA------------------------- 315
             L N+M +  I  ++  Y+++ING C  G+   A                         
Sbjct: 438 FLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISG 497

Query: 316 ------FAYFCQMLKR----GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
                 F+  C+ LK+       PD+  YN+L+  L   GK+DEA  +Y  + + G  P+
Sbjct: 498 YCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPN 557

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
             +Y  +I G  + G++ KA + L  ML   + P   I+  I++GY +  +L    S   
Sbjct: 558 DFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLK 617

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            ML  G+  +   +  +I   +  G +  A S+   +  +G+ PD   Y  LI   C   
Sbjct: 618 SMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAA 677

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  A+ L DEM ++GI P I  Y  LI G C   ++  A  +F  I   GL  + + + 
Sbjct: 678 DMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYT 737

Query: 546 ILKKRYRRMKESDKARDIHQKWL 568
            L   Y +  +   A D++ + L
Sbjct: 738 TLIDGYCKAGDIRDAIDLYNEML 760



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 195/404 (48%), Gaps = 4/404 (0%)

Query: 139 WLRRKMIQ-KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
           W  R  ++  G  PDV T++ L+   CK+ DLE A  V+ EM E   S N  TYN  I G
Sbjct: 228 WKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGG 287

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
            CR   +++A      M + G+ P+  T+  +++ LCK+G    A   L E+        
Sbjct: 288 LCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSC---AGL 344

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
             +V+  + L+D + + G+  +A  +  +M    +Q + + Y+ LI G C  G +  A  
Sbjct: 345 MPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASR 404

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
              QM K G++ D +TYN ++    +Q   +EA      + K G++P+  +Y  II GLC
Sbjct: 405 ILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLC 464

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G+  +A   L  M+   + P   ++  +I GY R G  S A      M    ++ +++
Sbjct: 465 QIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLY 524

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            +N+LI+  +  G + +A     EML  G  P+ FTY  LI      G++  A QL  +M
Sbjct: 525 CYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQM 584

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           L  G+ P+   Y ++++G+    N+++       +   GL  D+
Sbjct: 585 LNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDN 628



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 209/436 (47%), Gaps = 39/436 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR LC  G++G A  + ++M + G + D +T+N ++    +  + E+A  ++ EM +  
Sbjct: 389 LIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGG 448

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SPN  TY+  I G C++ E ++A  L   M  +G++PN   +  L+   C++G    A 
Sbjct: 449 ISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLAC 508

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L ++  ++    T D+     L+      G   +A+  +++M +K  Q +   Y  LI
Sbjct: 509 ETLKKMTREN---LTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLI 565

Query: 304 NGFCLNGDISSA----------------FAY-------------------FCQMLKRGFL 328
           +G+ + G++  A                F Y                      ML++G +
Sbjct: 566 HGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLM 625

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           PD   Y  +++ L   G +  A     V+ K G+ PD + Y ++I G C   D+ KA   
Sbjct: 626 PDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGL 685

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  M +K + P    +N +IDG+ +  D+S+A +I + ++  G+  N  T+  LI    +
Sbjct: 686 LDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCK 745

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G I DA  L  EML +G+ PD F Y++L     N G +  AL + +EM+ RG    I +
Sbjct: 746 AGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYA-IISS 804

Query: 509 YTELIKGHCARGNMKE 524
           +  L+ G C RG ++E
Sbjct: 805 FNTLVHGFCKRGKLQE 820



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 188/369 (50%), Gaps = 4/369 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           SP+  TY+  I  YC+V +L+ A  +   M   G   N VT+N L+  LC+ G + +A  
Sbjct: 240 SPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFG 299

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
           +  E+   +D     D  T   +++   K G   QA  L ++M    +  ++V Y+ LI+
Sbjct: 300 YKKEM---EDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLID 356

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           GF   G+   AF    +M   G  P+ ITY+ L+  LCK G++  AS     ++K G   
Sbjct: 357 GFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMA 416

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D ++Y  +I+G     +  +A   L  M +  + P  + +++II+G  + G+   A  + 
Sbjct: 417 DTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLL 476

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           + M++ G+  N F +  LI    R GS   A    K+M  + + PD++ YN LI    N+
Sbjct: 477 EQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNV 536

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL-AIDHIP 543
           G +  A++ YDEML +G  P+  TY  LI G+   GN+++AE++  ++   GL   D I 
Sbjct: 537 GKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIY 596

Query: 544 FRILKKRYR 552
            +IL+  ++
Sbjct: 597 AQILEGYFK 605



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 194/422 (45%), Gaps = 5/422 (1%)

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           +G  P VL  + LV+   K G +     V+  M ++  +P+    N  +    R + LD 
Sbjct: 169 QGRRPVVL--DVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDL 226

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
              +   M   GI P+  T++ L+ A CK   L  A K + E+    +   + +V+T   
Sbjct: 227 LWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEM---RETGCSLNVVTYNT 283

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+    + G   +A     +M    +  D   Y  +ING C  G    A     +M   G
Sbjct: 284 LIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAG 343

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            +P+V+ Y+TL++   +QG  DEA      +S  GV P++I+Y  +I+GLC  G + +A 
Sbjct: 344 LMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRAS 403

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             L  M +   + +   +N++I+G+ R  +   AF + + M   G+S NV+T++ +I   
Sbjct: 404 RILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGL 463

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G    A  L ++M+ DG+ P+ F Y  LI   C  G   LA +   +M R  +TPD+
Sbjct: 464 CQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDL 523

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             Y  LI G    G M EA E + ++   G   +   +  L   Y      +KA  +  +
Sbjct: 524 YCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQ 583

Query: 567 WL 568
            L
Sbjct: 584 ML 585



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 184/436 (42%), Gaps = 55/436 (12%)

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
           W R ++      PD   H  L   LC  G   +A+ ++ +M    P+P            
Sbjct: 108 WSRTRLAPSAPAPDAFAH--LAVSLCAAGLYPQANGLLDQMIRAYPTPPLVL-------- 157

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
                   ++H   + ++ G RP  V  ++LV    K G + D  + +  +L  D G A 
Sbjct: 158 -------SSVHRALSGSDQGRRP--VVLDVLVDTYKKTGRVRDGAEVV--LLMKDLGLAP 206

Query: 259 S----------------------------------DVITSTILMDSYFKNGDKFQALALW 284
           S                                  DV T + L+++Y K  D   A  + 
Sbjct: 207 SLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVV 266

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
            +M +     ++V YN LI G C  G I  AF Y  +M   G +PD  TY  ++N LCK+
Sbjct: 267 EEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKR 326

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
           G+ D+A      +S  G+ P+ + Y T+I G    G+  +A + +  M    V P    +
Sbjct: 327 GRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITY 386

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           + +I G  + G +  A  I   M   G  ++  T+N +I    R  +  +AF L  EM  
Sbjct: 387 DNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRK 446

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            GI P+V+TY+++I   C +G    A  L ++M+  G+ P+   Y  LI G+C  G+   
Sbjct: 447 GGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSL 506

Query: 525 AEEVFAKIQTLGLAID 540
           A E   K+    L  D
Sbjct: 507 ACETLKKMTRENLTPD 522



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 191/429 (44%), Gaps = 59/429 (13%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
            R  L  D   + ++I  L   GK+  A+    +M++KG  P+  T+  L++     G+L
Sbjct: 515 TRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNL 574

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           EKA+ ++ +M     +PN   Y   + GY + + L+K      +M   G+ P+   + I+
Sbjct: 575 EKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIV 634

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +H L   G +  AV  L  +  + +G     +I  + L+  + K  D  +A+ L ++M +
Sbjct: 635 IHNLSSSGHMQAAVSVLSVI--EKNGLVPDSLIYGS-LISGFCKAADMEKAVGLLDEMAK 691

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K I+  I  YN LI+GFC + DIS A   F  ++ +G  P+ +TY TL++  CK G + +
Sbjct: 692 KGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRD 751

Query: 350 ASHFYGVLSKTGVAPDQI----------------------------------SYKTIIQG 375
           A   Y  +   GVAPD                                    S+ T++ G
Sbjct: 752 AIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHG 811

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C  G + +  +FL  M++K +VP       I+ G G  G LS A +I            
Sbjct: 812 FCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTI------------ 859

Query: 436 VFTFNALILAETRGGSIFDA---FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
                  +  + +  S  D     SL  +M+  G+ P    +N +I + C  G++  AL 
Sbjct: 860 ------FVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHN-MIQSHCKQGYLDKALM 912

Query: 493 LYDEMLRRG 501
           L+D ++ +G
Sbjct: 913 LHDALVAKG 921



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 139/327 (42%), Gaps = 69/327 (21%)

Query: 96  ENLDR----LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           +NL++    LK+M + G     L  D R +  VI +L   G +  A+ +   + + G VP
Sbjct: 607 DNLEKVSSTLKSMLEKG-----LMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVP 661

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D L +  L++  CK  D+EKA  ++ EM++    P  + YNA I G+C+ +++  A ++F
Sbjct: 662 DSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIF 721

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
           +++   G+ PN VT+  L+   CK G + DA+    E+L +       D    ++L    
Sbjct: 722 NSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEG---VAPDAFVYSVLAAGC 778

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN--------------------------- 304
             +GD  QAL +  +M  +     I ++N L++                           
Sbjct: 779 SNSGDLQQALFITEEMIARGYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSL 837

Query: 305 --------GFCLNGDISSAFAYFCQ--------------------MLKRGFLPDVITYNT 336
                   G    G +S A   F +                    M+ +G +P  + +N 
Sbjct: 838 LTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHN- 896

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVA 363
           ++   CKQG LD+A   +  L   G A
Sbjct: 897 MIQSHCKQGYLDKALMLHDALVAKGRA 923


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 213/424 (50%), Gaps = 3/424 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LCL G++   L L       G +P V+ +N L++  C+ GD+ +   ++ EM    
Sbjct: 210 LVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKG 269

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P   TY + I    +  +L+K   LF  M   G+ PN   +N ++ ALCK      A+
Sbjct: 270 FLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAM 329

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++ A        D+IT   L+      G   +A     +  ++ +  + ++Y  LI
Sbjct: 330 VILKQMFASG---CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLI 386

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GFC+ G++ +A     +M+ RG  PDV+T+  L++ L   GK+ EA      +++  V 
Sbjct: 387 HGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF 446

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD   Y  +I GLC    +  A+  L  MLEK+V P+  ++  +IDG+ R  +L +A  I
Sbjct: 447 PDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKI 506

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   GV  ++ + NA+I    + G + +A      M   G  PD FTY  +I     
Sbjct: 507 FEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAK 566

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G+++ AL+   +M++R   P+++TY+ LI G+C  G+   AE +FA +Q   L+ + + 
Sbjct: 567 QGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVT 626

Query: 544 FRIL 547
           + IL
Sbjct: 627 YTIL 630



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 184/390 (47%), Gaps = 3/390 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G +G  L L  +M  KG +P ++T+  L+N L K GDLEK   +  EM +  
Sbjct: 245 LIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRG 304

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SPN   YN+ I   C+     +A+ +   M  +G  P+ +T N L+  LC +G +  A 
Sbjct: 305 LSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAE 364

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            FL E +  +      + ++ T L+  +   G+   A  L  +M  +    D+V +  LI
Sbjct: 365 HFLREAIRRE---LNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALI 421

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G  + G +S A     +M +R   PDV  YN L++ LCK+  L  A +    + +  V 
Sbjct: 422 HGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQ 481

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD+  Y T+I G     ++  AR+    M  K V P+    N +I GY + G +S A   
Sbjct: 482 PDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILC 541

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G   + FT+  +I    + G++  A     +M+     P+V TY+ LI   C 
Sbjct: 542 MSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCK 601

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELI 513
            G    A  L+  M    ++P+++TYT LI
Sbjct: 602 TGDTDSAEGLFANMQAEALSPNVVTYTILI 631



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 223/485 (45%), Gaps = 24/485 (4%)

Query: 87  FNALDLILKENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWL-RRK 143
           F+A+D       D L++M   G  P R  L        A++      G +G A  +  R 
Sbjct: 114 FDAVD-------DTLQSMSLAGAAPTRACLG-------ALVAAYADAGMLGKATDMCERL 159

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
             Q G++P+V   N L+  L +    + A  +  EM       +  +    + G C    
Sbjct: 160 REQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGR 219

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +++ L L       G  P+ V +N+L+   C++G +G  +  LGE+ A         ++T
Sbjct: 220 VEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKG---FLPTLVT 276

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              L++   K GD  +  +L+ +M ++ +  ++  YN +I+  C     + A     QM 
Sbjct: 277 YGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMF 336

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  PD+IT+NTL+  LC +G + +A HF     +  + P+Q+SY  +I G C+ G+++
Sbjct: 337 ASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELM 396

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A + L+ M+ +   P+   +  +I G    G +S A  +R+ M    V  +V  +N LI
Sbjct: 397 AASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLI 456

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               +   +  A ++ +EML   + PD F Y  LI       ++  A ++++ M  +G+ 
Sbjct: 457 SGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVR 516

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PDI++   +IKG+C  G M EA    + ++ +G   D   +  +   Y +    + A   
Sbjct: 517 PDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGA--- 573

Query: 564 HQKWL 568
             +WL
Sbjct: 574 -LRWL 577



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 195/457 (42%), Gaps = 53/457 (11%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  + + + +VI  LC       A+ + ++M   G  PD++T N L+  LC  G + KA+
Sbjct: 305 LSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAE 364

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           H +RE      +PN  +Y   I G+C   EL  A  L   M   G  P+ VT   L+H L
Sbjct: 365 HFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGL 424

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
              G + +A+  + E + +   +   DV    +L+    K      A  +  +M +KN+Q
Sbjct: 425 VVAGKVSEAL-IVREKMTER--QVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQ 481

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D   Y  LI+GF  + ++  A   F  M  +G  PD+++ N ++   C+ G + EA   
Sbjct: 482 PDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILC 541

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + K G  PD+ +Y T+I G    G++  A  +L  M+++   P    ++ +I+GY +
Sbjct: 542 MSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCK 601

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            GD  +A  +   M +  +S NV T+  LI +  +   +  A    + MLL+   P+  T
Sbjct: 602 TGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVT 661

Query: 474 YNLLIGA------------SCNLGHIH--------------------------------- 488
            + L+               CN   +H                                 
Sbjct: 662 LHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCR 721

Query: 489 -----LALQLYDEMLRRGITPDIITYTELIKGHCARG 520
                 AL   + M ++G  P+ IT+  L+ G C+ G
Sbjct: 722 HNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVG 758



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  L + GK+  AL +R KM ++   PDV  +N L++ LCK   L  A +++ EM E 
Sbjct: 419 ALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEK 478

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   Y   I G+ R   L  A  +F  M + G+RP+ V+ N ++   C+ G++ +A
Sbjct: 479 NVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEA 538

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  +  +          D  T T ++  Y K G+   AL    DM ++  + ++V Y+ L
Sbjct: 539 ILCMSNM---RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSL 595

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING+C  GD  SA   F  M      P+V+TY  L+  L K+ K+  A  ++  +     
Sbjct: 596 INGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHC 655

Query: 363 APDQISYKTIIQGL-----------CIHGDIVKAREFLLSMLEKSVV----PEPHIWNVI 407
           +P+ ++   ++ GL           C +   V  ++ LL + +K V     P    +N I
Sbjct: 656 SPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAI 715

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I    R   L  A   ++ M   G   N  TF +L+      G   +  ++         
Sbjct: 716 IFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWRTILPNEFQQEE 775

Query: 468 FPDVFTYNLL 477
           F  +F Y  L
Sbjct: 776 FEIIFRYKFL 785



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 179/416 (43%), Gaps = 4/416 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P  L H+ L+  L +    +  D  ++ MS    +P  A   A +  Y     L KA  +
Sbjct: 96  PTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDM 155

Query: 211 FSTMANNGIRPNRVTH-NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
              +         VTH N L+  L ++    DA K   E+L +D G   +D  ++ +L+ 
Sbjct: 156 CERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSG---ADNYSTCVLVR 212

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
                G   + L L    +       +V YNVLI+G+C  GD+        +M  +GFLP
Sbjct: 213 GLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLP 272

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
            ++TY +L+NCL K+G L++    +  + K G++P+   Y ++I  LC      +A   L
Sbjct: 273 TLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVIL 332

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M      P+   +N +I G    G +  A       +   ++ N  ++  LI      
Sbjct: 333 KQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMR 392

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G +  A  L  EM+  G  PDV T+  LI      G +  AL + ++M  R + PD+  Y
Sbjct: 393 GELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIY 452

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
             LI G C +  +  A+ +  ++    +  D   +  L   + R +    AR I +
Sbjct: 453 NVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 508


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 201/425 (47%), Gaps = 5/425 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE     + +++   C  GKI  AL L  +M  KG  P + T   L++ L + G +  A 
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM+E    PN  TYN  I GYC   ++ KA      M   GI P+  ++  L+H L
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C  G   +A  F+  +     G    + I  T L+  + + G   +AL++  +M Q+ + 
Sbjct: 588 CLTGQASEAKVFVDGL---HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+V Y VLI+G   + D    F    +M  RG  PD + Y ++++   K G   EA   
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           + ++   G  P++++Y  +I GLC  G + +A      M   S VP    +   +D   +
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK 764

Query: 414 CG-DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
              D+  A  + + +L  G+ +N  T+N LI    R G I +A  L   M+ DG+ PD  
Sbjct: 765 GEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY  +I   C    +  A++L++ M  +GI PD + Y  LI G C  G M +A E+  ++
Sbjct: 824 TYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883

Query: 533 QTLGL 537
              GL
Sbjct: 884 LRQGL 888



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 216/476 (45%), Gaps = 38/476 (7%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
            C  GK+ TAL    +M+  G    V  +N L+N  CK GD+  A+  + EM   +  P 
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY + + GYC   +++KAL L+  M   GI P+  T   L+  L + GL+ DAVK   
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E+    +     + +T  ++++ Y + GD  +A     +M +K I  D  +Y  LI+G C
Sbjct: 532 EMA---EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
           L G  S A  +   + K     + I Y  LL+  C++GKL+EA      + + GV  D +
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            Y  +I G   H D       L  M ++ + P+  I+  +ID   + GD   AF I DLM
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM------------------------- 462
           ++ G   N  T+ A+I    + G + +A  L  +M                         
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVD 768

Query: 463 ----------LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
                     +L G+  +  TYN+LI   C  G I  A +L   M+  G++PD ITYT +
Sbjct: 769 MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           I   C R ++K+A E++  +   G+  D + +  L        E  KA ++  + L
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 208/438 (47%), Gaps = 38/438 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI---------------- 166
            +I  LC   K+  A+ +++ +  K   PDV+T+  LV  LCK+                
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCL 326

Query: 167 -------------------GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
                              G +E+A ++++ + +   SPN   YNA I   C+  +  +A
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             LF  M   G+RPN VT++IL+   C++G L  A+ FLGE++  D G   S V     L
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV--DTGLKLS-VYPYNSL 443

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           ++ + K GD   A     +M  K ++  +V Y  L+ G+C  G I+ A   + +M  +G 
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P + T+ TLL+ L + G + +A   +  +++  V P++++Y  +I+G C  GD+ KA E
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
           FL  M EK +VP+ + +  +I G    G  S A    D +       N   +  L+    
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           R G + +A S+ +EM+  G+  D+  Y +LI  S       L   L  EM  RG+ PD +
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV 683

Query: 508 TYTELIKGHCARGNMKEA 525
            YT +I      G+ KEA
Sbjct: 684 IYTSMIDAKSKTGDFKEA 701



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 213/460 (46%), Gaps = 3/460 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           + +L  + R   A++  L      G A+ L   M+  G  PDV  +  ++  LC++ DL 
Sbjct: 185 KVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLS 244

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  +I  M       N   YN  I G C+  ++ +A+ +   +A   ++P+ VT+  LV
Sbjct: 245 RAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLV 304

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           + LCK       ++ + E+L      + + V +   L++   K G   +AL L   +   
Sbjct: 305 YGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS---LVEGLRKRGKIEEALNLVKRVVDF 361

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            +  ++  YN LI+  C       A   F +M K G  P+ +TY+ L++  C++GKLD A
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
             F G +  TG+      Y ++I G C  GDI  A  F+  M+ K + P    +  ++ G
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           Y   G ++ A  +   M   G++ +++TF  L+    R G I DA  L  EM    + P+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             TYN++I   C  G +  A +   EM  +GI PD  +Y  LI G C  G   EA+    
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            +      ++ I +  L   + R  + ++A  + Q+ + R
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 200/438 (45%), Gaps = 3/438 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   +  D   +  VIR LC    +  A  +   M   G   +++ +N L++ LCK   +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A  + ++++     P+  TY   + G C+V E +  L +   M      P+    + L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           V  L K+G + +A+  +  V+   D   + ++     L+DS  K     +A  L++ M +
Sbjct: 339 VEGLRKRGKIEEALNLVKRVV---DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             ++ + V Y++LI+ FC  G + +A ++  +M+  G    V  YN+L+N  CK G +  
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A  F   +    + P  ++Y +++ G C  G I KA      M  K + P  + +  ++ 
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  R G + +A  + + M  + V  N  T+N +I      G +  AF   KEM   GI P
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D ++Y  LI   C  G    A    D + +     + I YT L+ G C  G ++EA  V 
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635

Query: 530 AKIQTLGLAIDHIPFRIL 547
            ++   G+ +D + + +L
Sbjct: 636 QEMVQRGVDLDLVCYGVL 653



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 140/281 (49%), Gaps = 7/281 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++   C  GK+  AL + ++M+Q+G   D++ +  L++   K  D +    +++EM 
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    P+   Y + I    +  +  +A  ++  M N G  PN VT+  +++ LCK G + 
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734

Query: 241 DAVKFLGEVLADDDGKATS--DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           +A     EVL       +S  + +T    +D   K     Q     ++   K +  +   
Sbjct: 735 EA-----EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTAT 789

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           YN+LI GFC  G I  A     +M+  G  PD ITY T++N LC++  + +A   +  ++
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           + G+ PD+++Y T+I G C+ G++ KA E    ML + ++P
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 123/237 (51%), Gaps = 10/237 (4%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           LK M D G     L+ D   + ++I      G    A  +   MI +G VP+ +T+  ++
Sbjct: 670 LKEMHDRG-----LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN-ELDKALHLFSTMANNGI 219
           N LCK G + +A+ +  +M  +   PN  TY  F+    +   ++ KA+ L + +   G+
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GL 783

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
             N  T+N+L+   C++G + +A + +  ++ D     + D IT T +++   +  D  +
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDG---VSPDCITYTTMINELCRRNDVKK 840

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
           A+ LWN M +K I+ D VAYN LI+G C+ G++  A     +ML++G +P+  T  T
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 44/289 (15%)

Query: 299 YNVLINGFCLNGDISSAFAYFCQML-KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
           +++LI  +  +  +      F  M+ K   LP+V T + LL+ L K      A   +  +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM----LEKSVVPEPHIWNVIIDG--- 410
              G+ PD   Y  +I+ LC   D+ +A+E +  M     + ++VP    +NV+IDG   
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVP----YNVLIDGLCK 274

Query: 411 ------------------------------YGRCG--DLSNAFSIRDLMLSFGVSSNVFT 438
                                         YG C   +      + D ML    S +   
Sbjct: 275 KQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAA 334

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
            ++L+    + G I +A +L K ++  G+ P++F YN LI + C     H A  L+D M 
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + G+ P+ +TY+ LI   C RG +  A     ++   GL +   P+  L
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 66/136 (48%)

Query: 90  LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
           LD++ K  +D  K +     +   L  +   +  +IR  C  G+I  A  L  +MI  G 
Sbjct: 759 LDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            PD +T+  ++NELC+  D++KA  +   M+E    P+   YN  I G C   E+ KA  
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878

Query: 210 LFSTMANNGIRPNRVT 225
           L + M   G+ PN  T
Sbjct: 879 LRNEMLRQGLIPNNKT 894


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 211/416 (50%), Gaps = 19/416 (4%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI      G +G A  L  KM+  G  P+V+T N +++ LCK+  ++KA+ V+
Sbjct: 120 DVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVL 179

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           ++M +    PNC TYN+ I GY    +  +A+ +   M+ +G RPN VT+N+L+  LCK 
Sbjct: 180 QQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKS 239

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G   +A +    ++         D  T   L+  Y   G+  +   + + M Q  ++++ 
Sbjct: 240 GFHAEAREIFNSMI---QSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNH 296

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             +++ I  +C  G +  A   F +M + GF+PD++TY T+++ LCK G+LD+A   +  
Sbjct: 297 HTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQ 356

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G++P+ I++ T+I G  ++G   KA E    M+++ + P+  I+  +ID   + G 
Sbjct: 357 MIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGK 416

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           ++ A  + DLM   G   NV ++N +I      G + +   L  +MLL G+ P   T+N 
Sbjct: 417 VTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNT 476

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           L+                D M+  G+ PD+ T   LI   C  G +++   +F ++
Sbjct: 477 LL----------------DGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREM 516



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 211/441 (47%), Gaps = 6/441 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           ++  L  D      ++R LC   +   A+  + R+M + G  PDV +++ L+  LC    
Sbjct: 40  IKTGLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKK 99

Query: 169 LEKADHVIREMSEMRPS--PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
            E+A  +I  M+E   +  P+  +Y+  I G+ +  ++ KA  LF  M ++GI PN VT 
Sbjct: 100 CEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTC 159

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           N ++  LCK   +  A   L +++   D     +  T   L+  Y  +G   +A+ +  +
Sbjct: 160 NSVIDGLCKVQAMDKAEAVLQQMI---DEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKE 216

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +   + ++V YN+LI+  C +G  + A   F  M++ G  PD  TY +LL+    +G 
Sbjct: 217 MSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGN 276

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           L E ++   ++ + G+  +  ++   I   C  G + +A    + M +   +P+   +  
Sbjct: 277 LVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTT 336

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +IDG  + G L +A S    M+  G+S N+ TF  LI   +  G    A  L  EM+  G
Sbjct: 337 VIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRG 396

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           I PDV  +  +I      G +  A +L+D M R G  P++++Y  +I G+   G + E  
Sbjct: 397 IPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVM 456

Query: 527 EVFAKIQTLGLAIDHIPFRIL 547
           ++   +  +GL    + F  L
Sbjct: 457 KLLDDMLLIGLKPTAVTFNTL 477



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 199/418 (47%), Gaps = 2/418 (0%)

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           K   PD+ T   L++  C  G L      + ++ +     +   +   +   C       
Sbjct: 7   KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66

Query: 207 ALHL-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           A+++    M   G  P+  +++ L+  LC +    +A + +  ++A+D      DV++ +
Sbjct: 67  AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELI-HMMAEDGDNCPPDVVSYS 125

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            ++  +FK GD  +A  L+  M    I  ++V  N +I+G C    +  A A   QM+  
Sbjct: 126 TVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE 185

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
             +P+  TYN+L++     G+  EA      +S+ G  P+ ++Y  +I  LC  G   +A
Sbjct: 186 HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEA 245

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           RE   SM++    P+   +  ++ GY   G+L    +++DLM+  G+ SN  TF+  I A
Sbjct: 246 REIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYA 305

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G + +A     +M   G  PD+ TY  +I   C +G +  A+  + +M+  G++P+
Sbjct: 306 YCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPN 365

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           IIT+T LI G    G  ++AEE+F ++   G+  D   F  +  R  +  +  +A+ +
Sbjct: 366 IITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKL 423



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 182/391 (46%), Gaps = 4/391 (1%)

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           + +P+ AT+   I+  C    L+        +   G+R + V    L+  LC K    DA
Sbjct: 8   KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDA 67

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK--NIQTDIVAYN 300
           +  +   + +     T DV + + L+          +A  L + M +   N   D+V+Y+
Sbjct: 68  MNIVLRRMPELG--CTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYS 125

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I+GF   GD+  A+  FC+ML  G  P+V+T N++++ LCK   +D+A      +   
Sbjct: 126 TVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE 185

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            + P+  +Y ++I G    G   +A   L  M      P    +N++ID   + G  + A
Sbjct: 186 HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEA 245

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             I + M+  G   +  T+ +L+      G++ +  ++K  M+ +G+  +  T+++ I A
Sbjct: 246 REIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYA 305

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  G +  A   + +M + G  PDI+TYT +I G C  G + +A   F ++   GL+ +
Sbjct: 306 YCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPN 365

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            I F  L   +    + +KA ++  + + R 
Sbjct: 366 IITFTTLIHGFSMYGKWEKAEELFYEMMDRG 396



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 16/201 (7%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI  LC  G++  A+    +MI  G  P+++T   L++     G  EKA+ + 
Sbjct: 330 DIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELF 389

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM +    P+   + A I    +  ++ +A  LF  M   G +PN V++N ++H     
Sbjct: 390 YEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIA 449

Query: 237 GLLGDAVKFLGEVLADD------------DGKAT----SDVITSTILMDSYFKNGDKFQA 280
           G +G+ +K L ++L               DG  +     DV T   L+DS  ++G     
Sbjct: 450 GEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDI 509

Query: 281 LALWNDMFQKNIQTDIVAYNV 301
           L L+ +M  K  +TD +  N+
Sbjct: 510 LTLFREMLGKADKTDTITENI 530


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 215/446 (48%), Gaps = 38/446 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +IR LC+ GKIG AL L  K I +G  PDV+T+  L+N LCK+G+   A  ++R M + 
Sbjct: 225 TLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK 284

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   YN  I   C+  ++ +A +LFS M   GI P+  T+N L+HALC        
Sbjct: 285 NCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHV 344

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E++   + K   +V+  + ++D+  K G    A  + + M ++ ++ D+V Y  L
Sbjct: 345 TTLLNEMV---NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTAL 401

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G CL  ++  A   F  M+ +G +P+V +YN L+N  C+  ++D+A      +S  G+
Sbjct: 402 MDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGL 461

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D ++Y T+I GLC  G +  A      M+    +P+   + +++D   +   L+    
Sbjct: 462 IADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLA---- 517

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
                             A++L +   GS  DA              D+  YN+ I   C
Sbjct: 518 -----------------EAMVLLKAIEGSNLDA--------------DILVYNIAIDGMC 546

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +  A  L+  +  +G+ PD+ TY  +I G C RG + EA ++F K+   G + D  
Sbjct: 547 RAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGC 606

Query: 543 PFRILKKRYRRMKESDKARDIHQKWL 568
            +  + + + R  E+  A  + Q+ L
Sbjct: 607 IYNTIIRGFLRSNETFGATQLLQEML 632



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 216/440 (49%), Gaps = 16/440 (3%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T L L  +M   G  PDV T N L+N  C +  L  A  V+ ++ ++   P+  T+N  I
Sbjct: 168 TVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLI 227

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   ++ +ALHLF      G +P+ VT+  L++ LCK G    A++ L  ++  +  
Sbjct: 228 RGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN-- 285

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               +VI    ++DS  K+    +A  L+++M  K I  DI  YN LI+  C   +    
Sbjct: 286 -CRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHV 344

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                +M+    +P+V+ ++T+++ LCK+G +  A     ++ K GV PD ++Y  ++ G
Sbjct: 345 TTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDG 404

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C+  ++ +A +   +M+ K  VP    +N++I+GY +   +  A  + + M   G+ ++
Sbjct: 405 HCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIAD 464

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             T+N LI      G +  A +L  EM+  G  PD+ TY +L+   C   H+  A+ L  
Sbjct: 465 TVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK 524

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL-------- 547
            +    +  DI+ Y   I G C  G ++ A ++F+ + + GL  D   + I+        
Sbjct: 525 AIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRG 584

Query: 548 -----KKRYRRMKESDKARD 562
                 K +R+M E+  +RD
Sbjct: 585 LLDEANKLFRKMDENGCSRD 604



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 203/427 (47%), Gaps = 3/427 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL    +M+     P  +    L+  + K+        +  +M      P+  T N  I 
Sbjct: 134 ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILIN 193

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            +C +  L  A  + + +   G +P+  T N L+  LC +G +G+A+    + + +    
Sbjct: 194 SFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG--- 250

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              DV+T   LM+   K G+   A+ L   M QKN + +++AYN +I+  C +  ++ AF
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F +M+ +G  PD+ TYN+L++ LC   +    +     +  + + P+ + + T++  L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G I  A + +  M+++ V P+   +  ++DG+    ++  A  + D M+  G   NV
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            ++N LI    +   +  A  L ++M L G+  D  TYN LI   C++G +  A+ L+ E
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M+  G  PD++TY  L+   C   ++ EA  +   I+   L  D + + I      R  E
Sbjct: 491 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 550

Query: 557 SDKARDI 563
            + ARD+
Sbjct: 551 LEAARDL 557



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 170/332 (51%), Gaps = 3/332 (0%)

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L DA+     +L      +T D    T L+ S  K       L+L   M    I  D+  
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDF---TKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYT 187

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
            N+LIN FC    +  AF+   ++LK G  PD  T+NTL+  LC +GK+ EA H +    
Sbjct: 188 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 247

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G  PD ++Y T++ GLC  G+   A   L SM++K+  P    +N IID   +   ++
Sbjct: 248 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 307

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            AF++   M++ G+S ++FT+N+LI A           +L  EM+   I P+V  ++ ++
Sbjct: 308 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 367

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            A C  G I +A  + D M++RG+ PD++TYT L+ GHC R  M EA +VF  +   G  
Sbjct: 368 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 427

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            +   + IL   Y +++  DKA  + ++  L+
Sbjct: 428 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ 459



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 154/327 (47%), Gaps = 5/327 (1%)

Query: 52  TLNDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAVF--NALDLILKENLDRLKTMRDTGP 109
           T N ++  + + C  K      N+  +++  P  V     +D + KE +  +        
Sbjct: 327 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 386

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++  +E D   + A++   CL  ++  A+ +   M+ KG VP+V ++N L+N  C+I  +
Sbjct: 387 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 446

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           +KA  ++ +MS      +  TYN  I G C V  L  A+ LF  M  +G  P+ VT+ IL
Sbjct: 447 DKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRIL 506

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LCK   L +A+  L  +   +     +D++   I +D   + G+   A  L++++  
Sbjct: 507 LDYLCKNHHLAEAMVLLKAI---EGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSS 563

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K +Q D+  YN++I+G C  G +  A   F +M + G   D   YNT++    +  +   
Sbjct: 564 KGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFG 623

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGL 376
           A+     +   G + D  +   I++ L
Sbjct: 624 ATQLLQEMLAEGFSADVSTTTLIVEML 650



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 60/125 (48%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +   I  +C  G++  A  L   +  KG  PDV T+N +++ LCK G L++A+
Sbjct: 531 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN 590

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + R+M E   S +   YN  I G+ R NE   A  L   M   G   +  T  ++V  L
Sbjct: 591 KLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEML 650

Query: 234 CKKGL 238
              GL
Sbjct: 651 SDDGL 655


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 209/403 (51%), Gaps = 7/403 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +VI++LC  G++ +AL L   MI++G  PD+ TH+ L+NELCK   +++A   ++ M+  
Sbjct: 54  SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRT 113

Query: 183 --RPSPNCATYNAFITGYCRVNELDKALHLFSTM-ANNGIRPNRVTHNILVHALCKKGLL 239
               + +C +YN+ +   C+  ++ +A  +FSTM +   + P+ V+++IL+   CK   L
Sbjct: 114 ISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDEL 173

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           G A K   +++   D     +V T    ++   + G    A  ++ +M       D++ Y
Sbjct: 174 GRAEKLYKQMI---DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITY 230

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           + LI+GF L      A   F  M+ RG  P+ +TYN LL+ LCK+ K DEA   +  + +
Sbjct: 231 STLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G  PD+++Y T++ G C  G I +A E    M+ K   P+   +N ++ G+ R G    
Sbjct: 291 RGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGE 350

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLI 478
           A  +  +M+S     +  + N +I   ++   + DA  + + M  D G  PD+ TYN LI
Sbjct: 351 ARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 410

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
              C    +  A++++ E+ R  ++PD   +  L++   A G+
Sbjct: 411 FGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 199/425 (46%), Gaps = 41/425 (9%)

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNC---ATYNAFITGYCRVNELDKALHLFSTMANNGI 219
           LCK G +E+A    R M E   S       T ++ I   C+   +D AL L  TM   G 
Sbjct: 21  LCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGY 80

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            P+  TH++L++ LCK   + +A +FL  +      +A+S   +   L++S  K     Q
Sbjct: 81  CPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASS-CFSYNSLLNSLCKAKKVHQ 139

Query: 280 ALALWNDMF-QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           A A+++ M  ++++  D+V+Y++LI+GFC   ++  A   + QM+    +P+V TYN  L
Sbjct: 140 AFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFL 199

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII------------------------- 373
           N L ++G++ +A   Y  +   G +PD I+Y T+I                         
Sbjct: 200 NGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCR 259

Query: 374 ----------QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
                      GLC      +A E    M+E+   P+   +  ++ G+   G +  A  +
Sbjct: 260 PNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEV 319

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M+S G   +V  +N L+    R G   +A  L + M+     PD  ++N++I     
Sbjct: 320 FDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSK 379

Query: 484 LGHIHLALQLYDEMLR-RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
              +  A+++++ M +  G +PD++TY  LI G C    + EA +VF +I  L L+ D  
Sbjct: 380 AKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPH 439

Query: 543 PFRIL 547
            F +L
Sbjct: 440 AFNVL 444



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 165/354 (46%), Gaps = 5/354 (1%)

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           N V     +  LCK G +  A +    +             T   ++    K G    AL
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF---LPDVITYNTLL 338
           +L   M ++    D+  +++LIN  C    I  A   F Q + R          +YN+LL
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEA-QEFLQGMNRTISTRASSCFSYNSLL 128

Query: 339 NCLCKQGKLDEA-SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           N LCK  K+ +A + F  ++S+  V PD +SY  +I G C   ++ +A +    M++ + 
Sbjct: 129 NSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 188

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           VP    +N  ++G  R G +++A  + + M+S G S +V T++ LI   +       A  
Sbjct: 189 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHE 248

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L + M+  G  P+  TYN L+   C       A +L+ +M+ RG  PD +TYT L+ G C
Sbjct: 249 LFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFC 308

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             G +++A EVF ++ + G   D + +  L K + R  +  +AR + Q  + R 
Sbjct: 309 NVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRE 362



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 39/265 (14%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I    L  K   A  L   MI +G  P+ +T+N L++ LCK    ++A  + 
Sbjct: 226 DVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELF 285

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           R+M E    P+  TY   + G+C V ++++A+ +F  M + G  P+ V +N L+    + 
Sbjct: 286 RKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA 345

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G  G+A +                                      L+  M  +  + D 
Sbjct: 346 GKPGEARQ--------------------------------------LFQVMVSRECKPDT 367

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           V++N++I+G      +  A   F +M +  G  PD++TYN+L+  LC + +L EA   + 
Sbjct: 368 VSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFK 427

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHG 380
            + +  ++PD  ++  +++ +   G
Sbjct: 428 EIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 4/164 (2%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   +  ++   C  GKI  A+ +  +M+ KG  PDV+ +N L+    + G   +A  
Sbjct: 294 DPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQ 353

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA-NNGIRPNRVTHNILVHAL 233
           + + M      P+  ++N  I G  +   LD A+ +F  M  ++G  P+ VT+N L+  L
Sbjct: 354 LFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGL 413

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           C +  L +A+K   E+   D  K + D     +L+++ +  G K
Sbjct: 414 CGEQRLSEAMKVFKEI---DRLKLSPDPHAFNVLLEAMYAAGHK 454


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 205/406 (50%), Gaps = 4/406 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  GK   +L+    M+ KG  PDV+    L+       ++ KA  V+ E+ E    P+ 
Sbjct: 80  CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-EILERYGKPDV 138

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             YNA I+G+ + N+L+ A  +   M + G  P+ VT+NI++ + C +G L  A++   E
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +L D+       VIT TIL+++   +G    A+ L ++M  K ++ D + YN +I G C 
Sbjct: 199 LLKDN---CEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCK 255

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
              +  AF     +  RG  PD+ITYN LL  L  +GK  E       +   G  P+ ++
Sbjct: 256 EMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVT 315

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           +  +I  LC  G + +A   L SM EK + P+ + ++ +I G+ R G L  A    + M+
Sbjct: 316 HSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMI 375

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           S G   ++  +N ++    R G    A  + +++   G  P+V +YN L  A  + G  +
Sbjct: 376 SDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRY 435

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
            AL++  ++L +GI PD ITY  LI   C  G + EA E+   +Q+
Sbjct: 436 RALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQS 481



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 196/426 (46%), Gaps = 10/426 (2%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M  +G +PDV+T+N ++   C  G L+ A  +  E+ +    P   TY   I       
Sbjct: 163 RMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDG 222

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            +D A+ L   M + G+ P+ +T+N ++  +CK+ ++  A + L  +          D+I
Sbjct: 223 GIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSL---SSRGCKPDII 279

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T  IL+ +    G   +   L ++M     + ++V +++LI   C +G +  A      M
Sbjct: 280 TYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSM 339

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            ++G  PD   Y+ L+   C++G+LD A+ F   +   G  PD ++Y TI+ GLC  G  
Sbjct: 340 KEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKA 399

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A E    + E    P    +N +       GD   A  +   +L+ G+  +  T+N+L
Sbjct: 400 DQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSL 459

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    R G + +A  L  +M      P+V +YN+++   C +   + A+++   M  +G 
Sbjct: 460 ISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGC 519

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR------YRRMKE 556
            P+  TY  LI+G    G   EA E+   +  +  AI    F  L K       Y+ +  
Sbjct: 520 QPNETTYILLIEGIGFSGLRAEAMELANSLHGMN-AISEDSFNRLNKTFPLLDVYKDLTF 578

Query: 557 SDKARD 562
           SD ++D
Sbjct: 579 SDGSKD 584



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 154/338 (45%), Gaps = 4/338 (1%)

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           CR  + +++L+    M + G  P+ +    L+        +G A + + E+L   +    
Sbjct: 80  CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-EIL---ERYGK 135

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            DV     L+  + K      A  + + M  +    D+V YN++I  FC  G +  A   
Sbjct: 136 PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEI 195

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           F ++LK    P VITY  L+      G +D A      +   G+ PD ++Y  II+G+C 
Sbjct: 196 FEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCK 255

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
              + KA E L S+  +   P+   +N+++      G  S    +   M+S G   NV T
Sbjct: 256 EMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVT 315

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
            + LI    R G + +A +L + M   G+ PD + Y+ LI   C  G + LA +  + M+
Sbjct: 316 HSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMI 375

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
             G  PDI+ Y  ++ G C  G   +A EVF K+  +G
Sbjct: 376 SDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVG 413



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 165/338 (48%), Gaps = 4/338 (1%)

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L++  C+ G   +++ FL E + D     T DVI  T L+  +F + +  +A  +  ++ 
Sbjct: 75  LLNRSCRAGKYNESLYFL-ECMVDKG--YTPDVILCTKLIKGFFNSRNIGKATRVM-EIL 130

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           ++  + D+ AYN LI+GF     + +A     +M  RGFLPDV+TYN ++   C +GKLD
Sbjct: 131 ERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLD 190

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            A   +  L K    P  I+Y  +I+   + G I  A + L  ML K + P+   +N II
Sbjct: 191 LALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAII 250

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
            G  +   +  AF +   + S G   ++ T+N L+      G   +   L  EM+  G  
Sbjct: 251 RGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCK 310

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P+V T+++LIG  C  G +  A+ L   M  +G+ PD   Y  LI G C  G +  A E 
Sbjct: 311 PNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEF 370

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
              + + G   D + +  +     R  ++D+A ++ +K
Sbjct: 371 LEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEK 408



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 63/109 (57%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL +  K++ +G  PD +T+N L++ LC+ G +++A  ++ +M   R  PN  +YN  + 
Sbjct: 437 ALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILL 496

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           G C+VN  + A+ + + M   G +PN  T+ +L+  +   GL  +A++ 
Sbjct: 497 GLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 203/392 (51%), Gaps = 3/392 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  GK+  A      M   G  P+V+T+N +++  C  G +E A  +   M    
Sbjct: 197 MINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRG 256

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY +FI+G C+  +L++A  +   M   G+RP  VT+N L+   C KG L  A 
Sbjct: 257 VKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAF 316

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            +  +++ +        V T  +L+ + F +    +A  +  +M +K +  D V YN+LI
Sbjct: 317 DYRDKMVREG---LMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILI 373

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG+C  G++  AF    +M+ +G  P  +TY +L+  L K+G++ +A   +  + + G+ 
Sbjct: 374 NGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIF 433

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD I +  +I G C +G++ +A   L  M +  VVP+   +N ++ G  R G +  A  +
Sbjct: 434 PDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAAREL 493

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M S G+  +  ++N LI   ++ G + DAF ++ EML  G  P + TYN LI   C 
Sbjct: 494 IEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCK 553

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
                 A QL  EM+ +GITP+  TY  LI+G
Sbjct: 554 NEEGDHAEQLLKEMISKGITPNDNTYLSLIEG 585



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 210/425 (49%), Gaps = 3/425 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M  KG +P V   N +++   K    EKA  +  EM  MR   +  T+N  I   C+  +
Sbjct: 147 MKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGK 206

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           L KA      M   GI+PN VT+N ++H  C +G + +  + + +++     K   D  T
Sbjct: 207 LKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRV-EGARMIFDLMKCRGVKP--DSYT 263

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
               +    K G   +A  +   M +  ++   V YN LI+G+C  G++  AF Y  +M+
Sbjct: 264 YGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMV 323

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           + G +P V TYN L++ L    K+DEA      +S+ G+ PD ++Y  +I G C  G++ 
Sbjct: 324 REGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVK 383

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           KA      M+ K + P    +  +I    + G +  A  + + ++  G+  ++  FNALI
Sbjct: 384 KAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALI 443

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                 G++  AF++ KEM    + PD  T+N L+   C  G +  A +L +EM  RGI 
Sbjct: 444 DGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIK 503

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PD I+Y  LI G+  RG+MK+A  V  ++ ++G     + +  L +   + +E D A  +
Sbjct: 504 PDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQL 563

Query: 564 HQKWL 568
            ++ +
Sbjct: 564 LKEMI 568



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 200/402 (49%), Gaps = 3/402 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A  L  +M +      V+T N ++N LCK G L+KA   I  M  +   PN  TYN  I 
Sbjct: 175 AWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIH 234

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           GYC    ++ A  +F  M   G++P+  T+   +  +CK+G L +A   L E + +   +
Sbjct: 235 GYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGML-EKMKEIGLR 293

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
            T+  +T   L+D Y   G+   A    + M ++ +   +  YN+LI+   L+  +  A 
Sbjct: 294 PTA--VTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEAD 351

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M ++G +PD +TYN L+N  C+ G + +A   +  +   G+ P +++Y ++I  L
Sbjct: 352 GIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVL 411

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
              G + +A +    ++ K + P+  ++N +IDG+   G++  AF++   M    V  + 
Sbjct: 412 SKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDE 471

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            TFN L+    R G +  A  L +EM   GI PD  +YN LI      G +  A ++ DE
Sbjct: 472 VTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDE 531

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
           ML  G  P ++TY  LI+G C       AE++  ++ + G+ 
Sbjct: 532 MLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGIT 573



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 162/321 (50%), Gaps = 12/321 (3%)

Query: 94  LKENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           L+E    L+ M++ G  P   T  T       +I   C  G +  A   R KM+++G +P
Sbjct: 277 LEEASGMLEKMKEIGLRPTAVTYNT-------LIDGYCNKGNLEMAFDYRDKMVREGLMP 329

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
            V T+N L++ L     +++AD +I+EMSE    P+  TYN  I GYCR   + KA  L 
Sbjct: 330 TVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLH 389

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M + GI+P RVT+  L++ L K+G +  A     +++         D+I    L+D +
Sbjct: 390 DEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKG---IFPDLIMFNALIDGH 446

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
             NG+  +A A+  +M Q  +  D V +N L+ G C  G + +A     +M  RG  PD 
Sbjct: 447 CANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDH 506

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           I+YNTL++   K+G + +A      +   G  P  ++Y  +IQGLC + +   A + L  
Sbjct: 507 ISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKE 566

Query: 392 MLEKSVVPEPHIWNVIIDGYG 412
           M+ K + P  + +  +I+G G
Sbjct: 567 MISKGITPNDNTYLSLIEGIG 587



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 147/294 (50%), Gaps = 13/294 (4%)

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K GD   A   ++ M  K +   + A N +++ F  +     A+  + +M +      V
Sbjct: 134 LKRGD--DAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSV 191

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +T+N ++N LCK+GKL +A  F G++   G+ P+ ++Y TII G C  G +  AR     
Sbjct: 192 VTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDL 251

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M  + V P+ + +   I G  + G L  A  + + M   G+     T+N LI      G+
Sbjct: 252 MKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGN 311

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGA---SCNLGHIHLALQLYDEMLRRGITPDIIT 508
           +  AF  + +M+ +G+ P V TYN+LI A    C +     A  +  EM  +G+ PD +T
Sbjct: 312 LEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDE---ADGIIKEMSEKGLVPDSVT 368

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR----ILKKRYRRMKESD 558
           Y  LI G+C  GN+K+A  +  ++ + G+    + +     +L KR  RMK++D
Sbjct: 369 YNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKR-GRMKQAD 421



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 127/272 (46%)

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y++LI   C       AF  F  M  +G +P V   N +L+   K  + ++A   Y  
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + +  +    +++  +I  LC  G + KA+EF+  M    + P    +N II GY   G 
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A  I DLM   GV  + +T+ + I    + G + +A  + ++M   G+ P   TYN 
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   CN G++ +A    D+M+R G+ P + TY  LI        M EA+ +  ++   G
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           L  D + + IL   Y R     KA  +H + +
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMI 393


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 209/437 (47%), Gaps = 6/437 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ LC   ++ TA+ +  +M   G  PD  T   L+    + G ++ A  V   M EM 
Sbjct: 191 LMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMG 250

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP   T N  I GYC++  ++ AL        NG  P+++T+N  V+ LC+ G +G A+
Sbjct: 251 CSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHAL 310

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K +  ++ +       DV T  I+++   KNG   +A  + N M ++    DI  +N LI
Sbjct: 311 KVMDVMVQEGH---DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLI 367

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
              C    +  A     Q+  +G  PDV T+N L+N LCK G    A   +  +  +G  
Sbjct: 368 VALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCT 427

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI-WNVIIDGYGRCGDLSNAFS 422
           PD+++Y T+I  LC  G + KA + LL  +E +  P   + +N IIDG  +   +  A  
Sbjct: 428 PDEVTYNTLIDNLCSLGKLGKALD-LLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEE 486

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M   G+S N  TFN LI    +   I DA  L  +M+ +G+ P+  TYN ++   C
Sbjct: 487 VFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYC 546

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G I  A  +   M   G   D++TY  LI G C  G  + A ++   ++  G+     
Sbjct: 547 KQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPK 606

Query: 543 PFR-ILKKRYRRMKESD 558
            +  +++  +RR    D
Sbjct: 607 AYNPVIQSLFRRNNTRD 623



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 230/491 (46%), Gaps = 18/491 (3%)

Query: 57  MSYVGDQCRSKTRHWFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLET 116
           M   G Q R    H F     ++    Q   +A+DL+L + LD L            ++ 
Sbjct: 104 MRREGHQVRVGVVHSFL----ESYARQQLFVDAVDLVLNQ-LDPL----------FGIQA 148

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++  L  G K+     +  +M ++G  PDV+T N L+  LC+   +  A  ++
Sbjct: 149 DTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLML 208

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EMS    +P+  T+   + G+     +  AL + + M   G  P +VT N+L++  CK 
Sbjct: 209 EEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKL 268

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + DA+ ++ + +A+       D IT    ++   +NG    AL + + M Q+    D+
Sbjct: 269 GRVEDALGYIQQEIANG---FEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDV 325

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             YN+++N  C NG +  A     QM++RG LPD+ T+NTL+  LC   +L+EA      
Sbjct: 326 FTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQ 385

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           ++  G++PD  ++  +I  LC  GD   A      M      P+   +N +ID     G 
Sbjct: 386 VTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGK 445

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L  A  +   M S G   +  T+N +I    +   I +A  +  +M L GI  +  T+N 
Sbjct: 446 LGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNT 505

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C    I  A QL  +M+  G+ P+ ITY  ++  +C +G++K+A ++   +   G
Sbjct: 506 LIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANG 565

Query: 537 LAIDHIPFRIL 547
             +D + +  L
Sbjct: 566 FEVDVVTYGTL 576



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 203/418 (48%), Gaps = 3/418 (0%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G   D + +N+L+N L +   ++  + V  EM E    P+  T+N  +   CR +++  A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + +   M+++G+ P+  T   L+    ++G +  A++    +L   +   +   +T  +L
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARML---EMGCSPTKVTVNVL 261

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           ++ Y K G    AL           + D + YN  +NG C NG +  A      M++ G 
Sbjct: 262 INGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGH 321

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PDV TYN ++NCLCK G+L+EA      + + G  PD  ++ T+I  LC    + +A +
Sbjct: 322 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALD 381

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               +  K + P+ + +N++I+   + GD   A  + + M S G + +  T+N LI    
Sbjct: 382 LARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLC 441

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G +  A  L KEM   G      TYN +I   C    I  A +++D+M  +GI+ + I
Sbjct: 442 SLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 501

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           T+  LI G C    + +A ++ +++ + GL  ++I +  +   Y +  +  KA DI Q
Sbjct: 502 TFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQ 559



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 198/416 (47%), Gaps = 3/416 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I  AL ++ +M++ G  P  +T N L+N  CK+G +E A   I++       P+  TY
Sbjct: 234 GSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITY 293

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N F+ G C+   +  AL +   M   G  P+  T+NI+V+ LCK G L +A   L +++ 
Sbjct: 294 NTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV- 352

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     D+ T   L+ +        +AL L   +  K +  D+  +N+LIN  C  GD
Sbjct: 353 --ERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGD 410

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A   F +M   G  PD +TYNTL++ LC  GKL +A      +   G     ++Y T
Sbjct: 411 PQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNT 470

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           II GLC    I +A E    M  + +      +N +IDG  +   + +A  +   M+S G
Sbjct: 471 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEG 530

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N  T+N+++    + G I  A  + + M  +G   DV TY  LI   C  G   +AL
Sbjct: 531 LQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVAL 590

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +L   M  +G+      Y  +I+    R N ++A  +F ++  +G   D   ++I+
Sbjct: 591 KLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIV 646



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 181/363 (49%), Gaps = 4/363 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC  G++  A  +  +M+++G +PD+ T N L+  LC    LE+A  + R+++   
Sbjct: 331 VVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKG 390

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP+  T+N  I   C+V +   AL LF  M ++G  P+ VT+N L+  LC  G LG A+
Sbjct: 391 LSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKAL 450

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E+  +  G   S V  +TI+ D   K     +A  +++ M  + I  + + +N LI
Sbjct: 451 DLLKEM--ESAGCPRSTVTYNTII-DGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 507

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C +  I  A     QM+  G  P+ ITYN++L   CKQG + +A+     ++  G  
Sbjct: 508 DGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFE 567

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D ++Y T+I GLC  G    A + L  M  K +   P  +N +I    R  +  +A ++
Sbjct: 568 VDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNL 627

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGG-SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
              M   G   + FT+  +     RGG SI +AF    EM+  G  P+  ++ +L     
Sbjct: 628 FREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLL 687

Query: 483 NLG 485
           NLG
Sbjct: 688 NLG 690



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 186/367 (50%), Gaps = 11/367 (2%)

Query: 175 VIREMSEMRPSPNCATYNAFITGYCR----VNELDKALHLFSTMANNGIRPNRVTHNILV 230
           ++ EM            ++F+  Y R    V+ +D  L+    +   GI+ + V +N L+
Sbjct: 100 LVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLF--GIQADTVVYNHLL 157

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           + L +    G  +K L  V ++   +    DV+T   LM +  +      A+ +  +M  
Sbjct: 158 NVLVE----GSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSS 213

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             +  D   +  L+ GF   G I +A     +ML+ G  P  +T N L+N  CK G++++
Sbjct: 214 SGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVED 273

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A  +       G  PDQI+Y T + GLC +G +  A + +  M+++   P+   +N++++
Sbjct: 274 ALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVN 333

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
              + G L  A  I + M+  G   ++ TFN LI+A   G  + +A  L +++ L G+ P
Sbjct: 334 CLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSP 393

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           DV+T+N+LI A C +G   LAL+L++EM   G TPD +TY  LI   C+ G + +A ++ 
Sbjct: 394 DVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLL 453

Query: 530 AKIQTLG 536
            ++++ G
Sbjct: 454 KEMESAG 460



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 9/256 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L + LD LK M   G  R T+  +      +I  LC   +I  A  +  +M  +G   + 
Sbjct: 446 LGKALDLLKEMESAGCPRSTVTYN-----TIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 500

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T N L++ LCK   ++ A+ +I +M      PN  TYN+ +T YC+  ++ KA  +  T
Sbjct: 501 ITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQT 560

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  NG   + VT+  L++ LCK G    A+K L   +     +AT       I   S F+
Sbjct: 561 MTANGFEVDVVTYGTLINGLCKAGRTQVALKLL-RGMRIKGMRATPKAYNPVI--QSLFR 617

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG-DISSAFAYFCQMLKRGFLPDVI 332
             +   A+ L+ +M +     D   Y ++  G C  G  I  AF +  +M+ +GF+P+  
Sbjct: 618 RNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFS 677

Query: 333 TYNTLLNCLCKQGKLD 348
           ++  L   L   G  D
Sbjct: 678 SFRMLAEGLLNLGMDD 693



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 18/235 (7%)

Query: 337 LLNCLCKQGKLDEASHFY-GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           LL  L +Q   D A       L++   AP    Y+ II+ L          + L++ + +
Sbjct: 47  LLTALREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRR 106

Query: 396 SVVPEPH-----IWNVIIDGYGRCGDLSNAFSIRDLMLS-----FGVSSNVFTFNALILA 445
               E H     + +  ++ Y R     +A    DL+L+     FG+ ++   +N L+  
Sbjct: 107 ----EGHQVRVGVVHSFLESYARQQLFVDAV---DLVLNQLDPLFGIQADTVVYNHLLNV 159

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
              G  +    ++  EM   GI PDV T+N L+ A C    +  A+ + +EM   G+ PD
Sbjct: 160 LVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPD 219

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
             T+T L++G    G++K A  V A++  +G +   +   +L   Y ++   + A
Sbjct: 220 ETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDA 274



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           +K+  D L+TM   G      E D   +  +I  LC  G+   AL L R M  KG     
Sbjct: 551 IKKAADILQTMTANG-----FEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATP 605

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCR-VNELDKALHLFS 212
             +N ++  L +  +   A ++ REM+E+   P+  TY     G CR    + +A     
Sbjct: 606 KAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLL 665

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M + G  P   +  +L   L   G+    ++ + E++ +      SDV      +  Y 
Sbjct: 666 EMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAI-EIIIEKADLGDSDVSA----IRGYL 720

Query: 273 KNGDKFQALALWNDMFQKN 291
           K    + ALA +  + + N
Sbjct: 721 KIRKFYDALATFGRLLKIN 739


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 199/392 (50%), Gaps = 3/392 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  GK+  A      M   G  P+V+T+N +++  C  G +E A  V+  M    
Sbjct: 242 MINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRG 301

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY + I+G C+  +L++A  +   M   G+ P  VT+N L+   C KG L  A 
Sbjct: 302 VEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAF 361

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            +  E++          V T  +L+ + F  G   +A  +  DM    I  D + YN+LI
Sbjct: 362 GYRDEMVRR---AILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILI 418

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG+C  G+   AF    +M+ +G  P ++TY +L+  L K+ ++  A   +  + + G +
Sbjct: 419 NGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGAS 478

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD I +  +I G C +G++ +A   L  M ++++VP+   +N ++ G  R G +  A  +
Sbjct: 479 PDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEAREL 538

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+  +  ++N LI   ++ G I DAF+++ EML  G  P + TYN LI   C 
Sbjct: 539 LKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCK 598

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
                LA +L  EM+ +GITPD  TY  LI+G
Sbjct: 599 NQQGDLAEELLKEMVSKGITPDDSTYFSLIEG 630



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 211/425 (49%), Gaps = 3/425 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M +KG VP + T N +++   K+   E    +  EM  ++      T+N  I   C+  +
Sbjct: 192 MKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGK 251

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           L KA     +M N G++PN VT+N ++H  C +G + +  + + +++ +       D  T
Sbjct: 252 LKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRV-EGARMVLDIMKNRG--VEPDSYT 308

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              L+    K G   +A  +   M +  +    V YN LI+G+C  GD+  AF Y  +M+
Sbjct: 309 YGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMV 368

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           +R  LP V TYN L++ L  +GK+DEA      +  +G+ PD I+Y  +I G C  G+  
Sbjct: 369 RRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAK 428

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           KA      M+ K + P    +  +I    +   +  A  + + ++  G S ++  FNALI
Sbjct: 429 KAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALI 488

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                 G++  AF+L KEM    I PD  TYN L+   C  G +  A +L  EM RRGI 
Sbjct: 489 DGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIR 548

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PD I+Y  LI G+  RG++ +A  +  ++ ++G     + +  L +   + ++ D A ++
Sbjct: 549 PDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEEL 608

Query: 564 HQKWL 568
            ++ +
Sbjct: 609 LKEMV 613



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 197/410 (48%), Gaps = 3/410 (0%)

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V T N ++N LCK G L+KA   I  M  +   PN  TYN  I GYC    ++ A  +  
Sbjct: 236 VYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLD 295

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M N G+ P+  T+  L+  +CK G L +A   L ++    +       +T   L+D Y 
Sbjct: 296 IMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKM---KEIGLLPTAVTYNTLIDGYC 352

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
             GD  +A    ++M ++ I   +  YN+LI+   L G +  A      M   G +PD I
Sbjct: 353 NKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSI 412

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TYN L+N  C+ G   +A + +  +   G+ P  ++Y ++I  L     +  A +    +
Sbjct: 413 TYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKI 472

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           + +   P+  ++N +IDG+   G+L  AF++   M    +  +  T+N L+    R G +
Sbjct: 473 IREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKV 532

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +A  L KEM   GI PD  +YN LI      G I+ A  + DEML  G  P ++TY  L
Sbjct: 533 EEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNAL 592

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
           I+G C       AEE+  ++ + G+  D   +  L +   ++ +S +A D
Sbjct: 593 IQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEASD 642



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 207/412 (50%), Gaps = 3/412 (0%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           + L+   C++   + A      M E    P   T+NA ++ + ++N+ +    L++ M  
Sbjct: 170 DMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFR 229

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
             I+    T NI+++ LCK+G L  A  F+G +   ++     +V+T   ++  Y   G 
Sbjct: 230 LKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSM---ENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
              A  + + M  + ++ D   Y  LI+G C  G +  A     +M + G LP  +TYNT
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L++  C +G L +A  +   + +  + P   +Y  +I  L + G + +A   +  M +  
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           +VP+   +N++I+GY RCG+   AF++ D M+S G+   + T+ +LI   ++   +  A 
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L ++++ +G  PD+  +N LI   C  G++  A  L  EM +R I PD +TY  L++G 
Sbjct: 467 DLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGR 526

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           C  G ++EA E+  +++  G+  DHI +  L   Y +  + + A  I  + L
Sbjct: 527 CREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEML 578



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 176/364 (48%), Gaps = 3/364 (0%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           PSP    +    T   RV  +    H  +   +     + +  ++L+ A C+     DA 
Sbjct: 127 PSPKSTLHLLKQTIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAF 186

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +     +  + G     + T   ++  + K         L+ +MF+  I++ +  +N++I
Sbjct: 187 ECFD--MMKEKG-VVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMI 243

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           N  C  G +  A  +   M   G  P+V+TYNT+++  C +G+++ A     ++   GV 
Sbjct: 244 NVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVE 303

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y ++I G+C  G + +A   L  M E  ++P    +N +IDGY   GDL  AF  
Sbjct: 304 PDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGY 363

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
           RD M+   +   V T+N LI A    G + +A  + K+M   GI PD  TYN+LI   C 
Sbjct: 364 RDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCR 423

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G+   A  L+DEM+ +GI P ++TYT LI     R  MK A+++F KI   G + D I 
Sbjct: 424 CGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIM 483

Query: 544 FRIL 547
           F  L
Sbjct: 484 FNAL 487



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 13/145 (8%)

Query: 97  NLDR----LKTM--RDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           NLDR    LK M  R+  P   T  T       +++  C  GK+  A  L ++M ++G  
Sbjct: 496 NLDRAFALLKEMDKRNIVPDEVTYNT-------LMQGRCREGKVEEARELLKEMKRRGIR 548

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD +++N L++   K GD+  A  +  EM  +  +P   TYNA I G C+  + D A  L
Sbjct: 549 PDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEEL 608

Query: 211 FSTMANNGIRPNRVTHNILVHALCK 235
              M + GI P+  T+  L+  + K
Sbjct: 609 LKEMVSKGITPDDSTYFSLIEGIGK 633



 Score = 47.0 bits (110), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 5/114 (4%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E  + LK M+  G     +  D+  +  +I      G I  A  +R +M+  G  P +
Sbjct: 532 VEEARELLKEMKRRG-----IRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTL 586

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           LT+N L+  LCK    + A+ +++EM     +P+ +TY + I G  +V++  +A
Sbjct: 587 LTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 207/432 (47%), Gaps = 6/432 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ LC   ++ TA+ +  +M  +G  PD  T   L+    + G +E A  V   M EM 
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            S    T N  I GYC++  ++ AL        +G  P+++T+N  V+ LC+   +G A+
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K +  ++ +       DV T  I+++   KNG   +A  + N M  +    DI  +N LI
Sbjct: 307 KVMDVMVQEGH---DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
              C    +  A     Q+  +G  PDV T+N L+N LCK G    A   +  +  +G  
Sbjct: 364 AALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 423

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI-WNVIIDGYGRCGDLSNAFS 422
           PD+++Y T+I  LC  G + KA + L  M E +  P   I +N IIDG  +   +  A  
Sbjct: 424 PDEVTYNTLIDNLCSLGKLGKALDLLKDM-ESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M   G+S N  TFN LI    +   I DAF L  +M+ +G+ P+  TYN ++   C
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYC 542

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G I  A  + + M   G   D++TY  LI G C  G  + A +V   ++  G+     
Sbjct: 543 KQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPK 602

Query: 543 PFR-ILKKRYRR 553
            +  +L+  +RR
Sbjct: 603 AYNPVLQSLFRR 614



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 204/416 (49%), Gaps = 3/416 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I  AL ++ +M++ G     +T N L+N  CK+G +E A   I++       P+  TY
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N F+ G C+ + +  AL +   M   G  P+  T+NI+V+ LCK G L +A   L +++ 
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV- 348

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             D     D+ T   L+ +        +AL L   +  K +  D+  +N+LIN  C  GD
Sbjct: 349 --DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 406

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A   F +M   G  PD +TYNTL++ LC  GKL +A      +  TG     I+Y T
Sbjct: 407 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 466

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           II GLC    I +A E    M  + +      +N +IDG  +   + +AF + + M+S G
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEG 526

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N  T+N+++    + G I  A  + + M  +G   DV TY  LI   C  G   +AL
Sbjct: 527 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++   M  +G+ P    Y  +++    R N+++A  +F ++  +G   D + ++I+
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIV 642



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 201/420 (47%), Gaps = 3/420 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           L  G K+     +  +M  +G  PDV+T N L+  LC+   +  A  ++ EMS    +P+
Sbjct: 156 LVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPD 215

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             T+   + G+     ++ AL + + M   G    +VT N+L++  CK G + DA+ ++ 
Sbjct: 216 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 275

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           + +AD       D IT    ++   +N     AL + + M Q+    D+  YN+++N  C
Sbjct: 276 QEIADG---FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 332

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            NG +  A     QM+ RG LPD+ T+NTL+  LC   +L+EA      ++  GV+PD  
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 392

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           ++  +I  LC  GD   A      M      P+   +N +ID     G L  A  +   M
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
            S G   +  T+N +I    +   I +A  +  +M L GI  +  T+N LI   C    I
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A  L ++M+  G+ P+ ITY  ++  +C +G++K+A ++   +   G  +D + +  L
Sbjct: 513 DDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 572



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 193/403 (47%), Gaps = 4/403 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            E D   +   +  LC    +G AL +   M+Q+G  PDV T+N +VN LCK G LE+A 
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M +    P+  T+N  I   C  N L++AL L   +   G+ P+  T NIL++AL
Sbjct: 342 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINAL 401

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G    A++   E+    +   T D +T   L+D+    G   +AL L  DM      
Sbjct: 402 CKVGDPHLALRLFEEM---KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCP 458

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
              + YN +I+G C    I  A   F QM  +G   + IT+NTL++ LCK  K+D+A   
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGL 518

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+ P+ I+Y +I+   C  GDI KA + L +M       +   +  +I+G  +
Sbjct: 519 INQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCK 578

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G    A  +   M   G+      +N ++ +  R  +I DA SL +EM   G  PD  T
Sbjct: 579 AGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALT 638

Query: 474 YNLLIGASC-NLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           Y ++    C   G I  A     EM+ +G  P+  ++  L +G
Sbjct: 639 YKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 181/363 (49%), Gaps = 4/363 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC  G++  A  +  +M+ +G +PD+ T N L+  LC    LE+A  + R+++   
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP+  T+N  I   C+V +   AL LF  M N+G  P+ VT+N L+  LC  G LG A+
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++ +    ++T   IT   ++D   K     +A  +++ M  + I  + + +N LI
Sbjct: 447 DLLKDMESTGCPRST---ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C +  I  AF    QM+  G  P+ ITYN++L   CKQG + +A+     ++  G  
Sbjct: 504 DGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D ++Y T+I GLC  G    A + L  M  K + P P  +N ++    R  ++ +A S+
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 623

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGS-IFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
              M   G   +  T+  +     RGG  I +AF    EM+  G  P+  ++ +L     
Sbjct: 624 FREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683

Query: 483 NLG 485
           NLG
Sbjct: 684 NLG 686



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 197/416 (47%), Gaps = 3/416 (0%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G   D + +N+L+N L +   ++  + V  EM      P+  T+N  +   CR +++  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + +   M++ G+ P+  T   L+    ++G +  A++    +L   +   ++  +T  +L
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML---EMGCSATKVTVNVL 257

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           ++ Y K G    AL           + D + YN  +NG C N  +  A      M++ G 
Sbjct: 258 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PDV TYN ++NCLCK G+L+EA      +   G  PD  ++ T+I  LC    + +A +
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               +  K V P+ + +N++I+   + GD   A  + + M + G + +  T+N LI    
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G +  A  L K+M   G      TYN +I   C    I  A +++D+M  +GI+ + I
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 497

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           T+  LI G C    + +A  +  ++ + GL  ++I +  +   Y +  +  KA DI
Sbjct: 498 TFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 202/427 (47%), Gaps = 4/427 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G++  AL   ++ I  G  PD +T+N  VN LC+   +  A  V+  M +  
Sbjct: 257 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYN  +   C+  +L++A  + + M + G  P+  T N L+ ALC    L +A+
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               +V        + DV T  IL+++  K GD   AL L+ +M       D V YN LI
Sbjct: 377 DLARQVTVKG---VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G +  A      M   G     ITYNT+++ LCK+ +++EA   +  +   G++
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            + I++ T+I GLC    I  A   +  M+ + + P    +N I+  Y + GD+  A  I
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M + G   +V T+  LI    + G    A  + + M + G+ P    YN ++ +   
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHC-ARGNMKEAEEVFAKIQTLGLAIDHI 542
             +I  AL L+ EM   G  PD +TY  + +G C   G +KEA +   ++   G   +  
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673

Query: 543 PFRILKK 549
            FR+L +
Sbjct: 674 SFRMLAE 680



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 202/418 (48%), Gaps = 10/418 (2%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P    +  ++ +L  +G L+    ++ EM            ++F+  Y      D A+ L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 211 FSTMANN--GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTIL 267
                    GI+ + V +N L++ L +    G  +K L  V ++   +    DV+T   L
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVE----GSKMKLLESVYSEMGARGIKPDVVTFNTL 187

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           M +  +      A+ +  +M  + +  D   +  L+ GF   G I +A     +ML+ G 
Sbjct: 188 MKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGC 247

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
               +T N L+N  CK G++++A  +       G  PDQI+Y T + GLC +  +  A +
Sbjct: 248 SATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALK 307

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            +  M+++   P+   +N++++   + G L  A  I + M+  G   ++ TFN LI A  
Sbjct: 308 VMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALC 367

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
            G  + +A  L +++ + G+ PDV+T+N+LI A C +G  HLAL+L++EM   G TPD +
Sbjct: 368 TGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEV 427

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKESDKARD 562
           TY  LI   C+ G + +A ++   +++ G     I +  +     +  R++E+++  D
Sbjct: 428 TYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFD 485



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 6/346 (1%)

Query: 205 DKALHLF-STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           D AL +  + +A +   P    +  ++  L   G L D +K L   +  +  +    V+ 
Sbjct: 55  DAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGAL-DLMKVLVAEMRREGHQVKLGVVH 113

Query: 264 STILMDSYFKNGDKFQALALWNDMFQK--NIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           S   +DSY        A+ L  +  Q    IQ D V YN L+N       +    + + +
Sbjct: 114 S--FLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSE 171

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M  RG  PDV+T+NTL+  LC+  ++  A      +S  GVAPD+ ++ T++QG    G 
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           I  A      MLE          NV+I+GY + G + +A       ++ G   +  T+N 
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
            +    +   +  A  +   M+ +G  PDVFTYN+++   C  G +  A  + ++M+ RG
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             PDI T+  LI   C    ++EA ++  ++   G++ D   F IL
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL 397



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 122/256 (47%), Gaps = 9/256 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L + LD LK M  TG  R T+  +      +I  LC   +I  A  +  +M  +G   + 
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYN-----TIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T N L++ LCK   ++ A  +I +M      PN  TYN+ +T YC+  ++ KA  +  T
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  NG   + VT+  L++ LCK G    A+K L  +     G   +    + +L  S F+
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK--GMRPTPKAYNPVL-QSLFR 613

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG-DISSAFAYFCQMLKRGFLPDVI 332
             +   AL+L+ +M +     D + Y ++  G C  G  I  AF +  +M+ +GF+P+  
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673

Query: 333 TYNTLLNCLCKQGKLD 348
           ++  L   L   G  D
Sbjct: 674 SFRMLAEGLLNLGMDD 689


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 233/480 (48%), Gaps = 44/480 (9%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++  A  L  +M+++G +P +L  N ++ ELCK+ +++KA+ ++++M +   +P+  TY
Sbjct: 224 GEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTY 283

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  I G C+   +DKA  +   M   G RPN +T+N L+H     G+  ++V+   ++  
Sbjct: 284 SLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM-- 341

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY------------ 299
                    V      + + FK+G   +A  +++ M  K  + DI++Y            
Sbjct: 342 -SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYV 400

Query: 300 --------------------------NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                                     N+LIN +   G +  A   F  M  +G +PD +T
Sbjct: 401 TVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVT 460

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           + T+++ LC+ G+LD+A H +  +   GV P +  Y  +IQG C HG++VKA+E +  M+
Sbjct: 461 FATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMM 520

Query: 394 EKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
            K  +P P +  ++ II+   + G ++    I D+M+  G   NV TFN+L+      G+
Sbjct: 521 NKD-IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 579

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + +AF+L   M   GI P+ + Y  L+   C  G I  AL ++ +ML +G+ P  + Y+ 
Sbjct: 580 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 639

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           ++ G         A+++F ++   G  +    + ++     R   +D+A  + +K    N
Sbjct: 640 ILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 699



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 198/413 (47%), Gaps = 7/413 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCK--IGDLEKADHVIREMSEMRP-SPNC 188
           G+   A  +   M+ KG  PD+++++   + +C   +  +    H I  +   +  +PN 
Sbjct: 364 GRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNK 423

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             +N  I  Y R   +DKA+ +F  M N G+ P+ VT   ++ +LC+ G L DA+     
Sbjct: 424 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 483

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY-NVLINGFC 307
           ++  D G   S+ +    L+     +G+  +A  L ++M  K+I    V Y + +IN  C
Sbjct: 484 MV--DIGVPPSEAVYGC-LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLC 540

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G ++        M++ G  P+V+T+N+L+   C  G ++EA      ++  G+ P+  
Sbjct: 541 KEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 600

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            Y T++ G C +G I  A      ML K V P   ++++I+ G  +    + A  +   M
Sbjct: 601 IYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEM 660

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +  G + ++ T+  ++    R     +A  L +++    +  D+ T+N++I A   +G  
Sbjct: 661 IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRR 720

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             A +L+D +   G+ P+I TY+ +I       + +EA+ +F  ++  G A D
Sbjct: 721 QEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASD 773



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 172/404 (42%), Gaps = 41/404 (10%)

Query: 186 PNCATYNAFITGYCRVN----------------------------------ELDKALHLF 211
           P   TYN  I  Y RV+                                  E+DKA  LF
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKAHCLF 233

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M   G+ P  +  N ++  LCK   +  A   + +++   D     D+ T ++++D  
Sbjct: 234 LEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMV---DSGIAPDLFTYSLIIDGL 290

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K+    +A  +   M +   + + + YN LI+G+ ++G  + +   F QM   G +P V
Sbjct: 291 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 350

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC---IHGDIVKAREF 388
              N+ ++ L K G+ +EA   +  +   G  PD ISY T    +C   +    V     
Sbjct: 351 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNI 410

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              ML K + P  H++N++I+ Y RCG +  A  I + M + G+  +  TF  +I +  R
Sbjct: 411 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 470

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G + DA      M+  G+ P    Y  LI   CN G +  A +L  EM+ + I P  + 
Sbjct: 471 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 530

Query: 509 Y-TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           Y + +I   C  G + E +++   +   G   + + F  L + Y
Sbjct: 531 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 574



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 145/293 (49%), Gaps = 3/293 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I +LC  G++     +   M+Q G  P+V+T N L+   C +G++E+A  ++  M+ +
Sbjct: 534 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 593

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PNC  Y   + GYC+   +D AL +F  M + G++P  V ++I++H L +      A
Sbjct: 594 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 653

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   E++   +   T  + T  +++    +N    +A  L   +F  N++ DI+ +N++
Sbjct: 654 KKMFHEMI---ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV 710

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+     G    A   F  +   G +P++ TY+ ++  L K+   +EA + +  + K+G 
Sbjct: 711 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 770

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
           A D      I++ L    ++ KA  +L  + E ++  E    +++   + R G
Sbjct: 771 ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 823



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 1/98 (1%)

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P + TYN+LI     +    L L +   +L+ G+ PD  +Y+ LI G    G + +A  +
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           F ++   G+    +    + K   +MKE DKA  I QK
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQK 270


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 186/357 (52%), Gaps = 5/357 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREM-SE 181
           VI   C  G++   + + R+M ++G + PD  T+  +++  CK+G +E A  V  EM +E
Sbjct: 153 VIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTE 212

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
            +  PN   YNA I GYC    L+ AL     M + G+     T+N+ VH L  +G   +
Sbjct: 213 GKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAE 272

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A   + E+   + G A  D  T  IL++ Y K G + +A+ ++  M  K I+  +V Y  
Sbjct: 273 AHALVEEM--GEKGLA-PDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTS 329

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LI+   + G +      F   ++RG  PD+  YN L+N  C  G +D A    G + K  
Sbjct: 330 LIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKR 389

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD ++Y T+++GLC+ G + +AR  +  M ++ + P+   +N +I GY   GD+ +A 
Sbjct: 390 ITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAV 449

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            +RD M+  G +  + T+NA+I      G   DA  L KEM+ +GI PD  TY  LI
Sbjct: 450 KVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLI 506



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 198/394 (50%), Gaps = 9/394 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC  GK   AL L R+M      P+ +T+N ++   C  G ++    ++REM E  
Sbjct: 122 MLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMREMRERG 177

Query: 184 P-SPNCATYNAFITGYCRVNELDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGD 241
             +P+  TY   I+G+C+V +++ A  +F  M   G + PN V +N L+   C +G L  
Sbjct: 178 GIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEV 237

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+++ GE++   D   +  V T  + + + F  G   +A AL  +M +K +  D   YN+
Sbjct: 238 ALRYRGEMV---DRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNI 294

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LING+C  G    A   F  M+ +G    V+TY +L++ L  +G + E    +    + G
Sbjct: 295 LINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRG 354

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD   Y  +I   C  GD+ +A E +  M +K + P+   +N ++ G    G L  A 
Sbjct: 355 IRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEAR 414

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + + M   G+  ++ ++N LI   +  G I DA  ++ EM+  G  P + TYN +I   
Sbjct: 415 GLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGL 474

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           C  G    A  L  EM+  GITPD  TY  LI+G
Sbjct: 475 CLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEG 508



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 189/387 (48%), Gaps = 7/387 (1%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T N ++  LC  G   +A  ++R+M    PSPN  TYN  I G+C    +   + +   M
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQM----PSPNAVTYNTVIAGFCARGRVQAGIEIMREM 173

Query: 215 -ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
               GI P++ T+  ++   CK G + DA K   E+L +  GK   + +    L+  Y  
Sbjct: 174 RERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTE--GKVEPNAVMYNALIGGYCD 231

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G+   AL    +M  + +   +  YN+ ++   + G  + A A   +M ++G  PD  T
Sbjct: 232 QGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFT 291

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN L+N  CK+GK  +A   + V+   G+    ++Y ++I  L + G + +        +
Sbjct: 292 YNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAV 351

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            + + P+  ++N +I+ +   GD+  AF I   M    ++ +  T+N L+      G + 
Sbjct: 352 RRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLD 411

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L +EM   GI PD+ +YN LI      G I  A+++ DEM+ +G  P ++TY  +I
Sbjct: 412 EARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMI 471

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAID 540
           KG C  G   +AE++  ++   G+  D
Sbjct: 472 KGLCLNGQGGDAEDLVKEMVGNGITPD 498



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 150/321 (46%), Gaps = 38/321 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  G +  AL  R +M+ +G    V T+N  V+ L   G   +A  ++ EM E 
Sbjct: 224 ALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEK 283

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  TYN  I GYC+  +  KA+ +F  M   GIR   VT+  L+HAL  KG++ + 
Sbjct: 284 GLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQET 343

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +                                      L+ND  ++ I+ D+  YN L
Sbjct: 344 DR--------------------------------------LFNDAVRRGIRPDLFMYNAL 365

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           IN  C  GD+  AF    +M K+   PD +TYNTL+  LC  G+LDEA      ++K G+
Sbjct: 366 INSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGI 425

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD +SY T+I G  + GDI  A +    M+ K   P    +N +I G    G   +A  
Sbjct: 426 QPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAED 485

Query: 423 IRDLMLSFGVSSNVFTFNALI 443
           +   M+  G++ +  T+ +LI
Sbjct: 486 LVKEMVGNGITPDDSTYISLI 506



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 170/380 (44%), Gaps = 45/380 (11%)

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           +  T+N  +   C   +  +AL L   M +    PN VT+N ++   C +G +   ++ +
Sbjct: 115 STTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIM 170

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            E+                                       +  I  D   Y  +I+G+
Sbjct: 171 REMRE-------------------------------------RGGIAPDKYTYATVISGW 193

Query: 307 CLNGDISSAFAYFCQMLKRGFL-PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           C  G +  A   F +ML  G + P+ + YN L+   C QG L+ A  + G +   GV+  
Sbjct: 194 CKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMT 253

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
             +Y   +  L + G   +A   +  M EK + P+   +N++I+GY + G    A  + +
Sbjct: 254 VATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFE 313

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
           +M+  G+ + V T+ +LI A +  G + +   L  + +  GI PD+F YN LI + C  G
Sbjct: 314 VMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGG 373

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  A ++  EM ++ ITPD +TY  L++G C  G + EA  +  ++   G+  D + + 
Sbjct: 374 DMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYN 433

Query: 546 ILKKRYRR---MKESDKARD 562
            L   Y     +K++ K RD
Sbjct: 434 TLISGYSMKGDIKDAVKVRD 453



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 143/329 (43%), Gaps = 41/329 (12%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  L+ D+F+  +      +N+++   C  G    A     QM      P+ +TYNT++ 
Sbjct: 100 AFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIA 155

Query: 340 CLCKQGKLDEASHFYGVL-SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML-EKSV 397
             C +G++         +  + G+APD+ +Y T+I G C  G +  A +    ML E  V
Sbjct: 156 GFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKV 215

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P   ++N +I GY   G+L  A   R  M+  GVS  V T+N  +      G   +A +
Sbjct: 216 EPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHA 275

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML------------------- 498
           L +EM   G+ PD FTYN+LI   C  G    A+++++ M+                   
Sbjct: 276 LVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALS 335

Query: 499 ----------------RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
                           RRGI PD+  Y  LI  HC  G+M  A E+  +++   +  D +
Sbjct: 336 MKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDV 395

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLRN 571
            +  L +    +   D+AR + ++   R 
Sbjct: 396 TYNTLMRGLCLLGRLDEARGLIEEMTKRG 424



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 42/235 (17%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R T+ T    + ++I  L + G +     L    +++G  PD+  +N L+N  C  GD+
Sbjct: 320 IRATVVT----YTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDM 375

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  ++ EM + R +P+  TYN  + G C +  LD+A  L   M   GI+P+ V++N L
Sbjct: 376 DRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTL 435

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +     KG + DAVK                                      + ++M  
Sbjct: 436 ISGYSMKGDIKDAVK--------------------------------------VRDEMMG 457

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           K     ++ YN +I G CLNG    A     +M+  G  PD  TY +L+  L  +
Sbjct: 458 KGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTE 512



 Score = 42.7 bits (99), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 47/90 (52%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I    + G I  A+ +R +M+ KG  P +LT+N ++  LC  G    A+
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAE 484

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNE 203
            +++EM     +P+ +TY + I G    +E
Sbjct: 485 DLVKEMVGNGITPDDSTYISLIEGLTTEDE 514


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 213/431 (49%), Gaps = 4/431 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           DY   V ++R LCL G +   L L       G VP+ + +N L++  C+ GD+ +   ++
Sbjct: 259 DYSTCV-MVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLL 317

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P   TY   ++   R  +L+K   L S M    + PN   +N ++ ALCK 
Sbjct: 318 GEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKC 377

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
                A+  L ++ A   G    D IT + L+    + G   +A  L  +  +  +  ++
Sbjct: 378 RSASQALVVLKQMFA---GGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNL 434

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
            +Y  LI+GFC+ G++  A     +M++RG  PDV+T+  L++ L   G++ EA      
Sbjct: 435 SSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREK 494

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           ++   + PD   Y  +I GLC    +  AR  +  MLE++V P+ +++  +IDG+ R   
Sbjct: 495 MAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNES 554

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L  A  I + M   G+  +V  +NA+I    + G + +A      M   G  PD FTY  
Sbjct: 555 LDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTT 614

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LIG     G+I  AL L  +M++R   P+++ Y+ LI G+C  G+   AE +F  +++ G
Sbjct: 615 LIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQG 674

Query: 537 LAIDHIPFRIL 547
           L  + I + IL
Sbjct: 675 LFPNVITYTIL 685



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 191/390 (48%), Gaps = 3/390 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G +G  + L  +M  KG +P V+T+  L++ L + GDLEK   ++ EM E R
Sbjct: 300 LIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERR 359

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN   YN+ I   C+     +AL +   M   G  P+ +T + L+  LC++G + +A 
Sbjct: 360 LPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAE 419

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E       +   ++ + T L+  +   G+   A  L  +M ++    D+V +  LI
Sbjct: 420 RLLRET---TRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALI 476

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G  + G +S A     +M  R  LPD   YN L++ LCK+  L  A +    + +  V 
Sbjct: 477 HGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVH 536

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD+  Y T+I G   +  + +AR+    M +K + P+   +N +I GY + G ++ A   
Sbjct: 537 PDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVEC 596

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G   + FT+  LI    + G+I  A SL  +M+     P+V  Y+ LI   C 
Sbjct: 597 MSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCK 656

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELI 513
           LG    A  L+  M  +G+ P++ITYT LI
Sbjct: 657 LGDTDAAECLFGSMESQGLFPNVITYTILI 686



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 202/442 (45%), Gaps = 13/442 (2%)

Query: 122 VAVIRDLCLGGKIGT----------ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
            AV    CLG  + T          A   +R     GT+P     N L+  L +    + 
Sbjct: 183 AAVPTRACLGALVATYADAGMEAKAAEMCQRAREHHGTLPGATHTNRLLRLLVERRRWDD 242

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A  +  EM       +  +    + G C    ++K L L       G  PN V +N+L+ 
Sbjct: 243 ARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLID 302

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
             C++G +G  +  LGE+ A         V+T   LM    + GD  +  +L ++M ++ 
Sbjct: 303 GYCRRGDVGRGILLLGEMEAKG---LLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERR 359

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           +  ++  YN +I+  C     S A     QM   G  PD IT++TL++ LC++G++ EA 
Sbjct: 360 LPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAE 419

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                 ++  + P+  SY ++I G C+ G+++ A   L+ M+E+   P+   +  +I G 
Sbjct: 420 RLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGL 479

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
              G +S A  +R+ M +  +  +   +N LI    +   +  A +L +EML   + PD 
Sbjct: 480 VVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDK 539

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
           + Y  LI        +  A ++++ M ++GI PD++ Y  +IKG+C  G M EA E  + 
Sbjct: 540 YVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMST 599

Query: 532 IQTLGLAIDHIPFRILKKRYRR 553
           ++ +G   D   +  L   Y +
Sbjct: 600 MRKVGRIPDEFTYTTLIGGYAK 621



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 174/361 (48%), Gaps = 3/361 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +VI  LC       AL + ++M   G  PD +T + L++ LC+ G +++A+ ++RE +  
Sbjct: 369 SVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRW 428

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +PN ++Y + I G+C   E+  A +L   M   G  P+ VT   L+H L   G + +A
Sbjct: 429 ELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEA 488

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    ++ A    +   D     +L+    K      A  L  +M ++N+  D   Y  L
Sbjct: 489 LLVREKMAAR---QLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTL 545

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GF  N  +  A   F  M ++G  PDV+ YN ++   C+ G ++EA      + K G 
Sbjct: 546 IDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGR 605

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD+ +Y T+I G    G+I  A   L  M+++   P    ++ +I+GY + GD   A  
Sbjct: 606 IPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAEC 665

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M S G+  NV T+  LI +  +   +  A    + MLL+   P+ +T + L+   C
Sbjct: 666 LFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLC 725

Query: 483 N 483
           N
Sbjct: 726 N 726



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 186/435 (42%), Gaps = 42/435 (9%)

Query: 156 HNYLVNELCKIGDLEKADHVIREMS---EMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           H+ L+  L + G  +  D  +R+MS        P  A   A +  Y       KA  +  
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQ 212

Query: 213 -TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
               ++G  P     N L+  L ++    DA K   E+LA++ G   +D  ++ +++   
Sbjct: 213 RAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESG---ADDYSTCVMVRGL 269

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
              G   + L L    +      + V YNVLI+G+C  GD+        +M  +G LP V
Sbjct: 270 CLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTV 329

Query: 332 ITYNTLLNCLCKQGKLDE--------------------------------ASHFYGVLSK 359
           +TY TL++ L ++G L++                                AS    VL +
Sbjct: 330 VTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQ 389

Query: 360 T---GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
               G  PD I++ T+I GLC  G + +A   L       + P    +  +I G+   G+
Sbjct: 390 MFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGE 449

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A ++   M+  G + +V TF ALI      G + +A  ++++M    + PD   YN+
Sbjct: 450 VIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNV 509

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C    +  A  L +EML + + PD   YT LI G     ++ EA ++F  ++  G
Sbjct: 510 LISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKG 569

Query: 537 LAIDHIPFRILKKRY 551
           +  D + +  + K Y
Sbjct: 570 IHPDVVGYNAMIKGY 584



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 186/419 (44%), Gaps = 60/419 (14%)

Query: 102 KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           + +R+T   R  L  +   + ++I   C+ G++  A  L  +M+++G  PDV+T   L++
Sbjct: 420 RLLRET--TRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIH 477

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC---------------------- 199
            L   G + +A  V  +M+  +  P+   YN  I+G C                      
Sbjct: 478 GLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHP 537

Query: 200 -------------RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
                        R   LD+A  +F  M   GI P+ V +N ++   C+ G++ +AV+ +
Sbjct: 538 DKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECM 597

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
             +     G+   D  T T L+  Y K G+   AL+L  DM ++  Q ++VAY+ LING+
Sbjct: 598 STM--RKVGR-IPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGY 654

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C  GD  +A   F  M  +G  P+VITY  L+  L K+ K+  A+ ++  +     +P+ 
Sbjct: 655 CKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPND 714

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
            +  +++ GLC             SM   S++       V + G G   D+  A      
Sbjct: 715 YTLHSLVTGLCN------------SM--ASIISSHCSSTVNLHGKGALLDIFRA------ 754

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
           +++         +NA+I +      + +A  LK +M   G  PD  T+  L+   C++G
Sbjct: 755 LVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVG 813



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 134/292 (45%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  L+++M  +    D  +  V++ G CL G +             G +P+ + YN L++
Sbjct: 243 ARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLID 302

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C++G +       G +   G+ P  ++Y T++  L   GD+ K    L  M E+ + P
Sbjct: 303 GYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPP 362

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
              I+N +ID   +C   S A  +   M + G   +  TF+ LI    + G + +A  L 
Sbjct: 363 NVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLL 422

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           +E     + P++ +Y  LI   C  G + +A  L  EM+ RG TPD++T+  LI G    
Sbjct: 423 RETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVA 482

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           G + EA  V  K+    L  D   + +L     + K    AR++ ++ L +N
Sbjct: 483 GQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQN 534



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/374 (21%), Positives = 141/374 (37%), Gaps = 88/374 (23%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE- 181
           A+I  L + G++  AL +R KM  +  +PD   +N L++ LCK   L  A ++I EM E 
Sbjct: 474 ALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQ 533

Query: 182 -MRPS---------------------------------PNCATYNAFITGYCRVNELDKA 207
            + P                                  P+   YNA I GYC+   +++A
Sbjct: 534 NVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEA 593

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           +   STM   G  P+  T+  L+    K+G +  A+  L +++     +   +V+  + L
Sbjct: 594 VECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKR---RCQPNVVAYSSL 650

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML---- 323
           ++ Y K GD   A  L+  M  + +  +++ Y +LI        +  A  YF  ML    
Sbjct: 651 INGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQC 710

Query: 324 ---------------------------------KRGFLPDVI-------------TYNTL 337
                                             +G L D+               YN +
Sbjct: 711 SPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAI 770

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +  LC    L EA      ++  G  PD  ++ +++ G C  G   + R  L +  ++  
Sbjct: 771 IFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEFQRDE 830

Query: 398 VPEPHIWNVIIDGY 411
           +     + ++ D Y
Sbjct: 831 LEVASRYKILFDQY 844


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 186/355 (52%), Gaps = 7/355 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I  A  +   M  KG  PD  T+  L++ +CK G LE+A  +  +M E+   PN  TY
Sbjct: 222 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 281

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYC   +L++A      M   GI P+  T+N+LVHAL  +G +G+A   + E+  
Sbjct: 282 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 341

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   D IT  IL++ Y + G+  +A  L N+M  K I+   V Y  LI        
Sbjct: 342 KG---IIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 398

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F ++L +G  PDVI +N +++  C  G ++ A      + +  V PD++++ T
Sbjct: 399 MKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 458

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++QG C  G + +AR  L  M  + + P+   +N +I GYGR GD+ +AF +RD MLS G
Sbjct: 459 LMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIG 518

Query: 432 VSSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
            +  + T+NALI  L + + G +  A  L KEM+  GI PD  TY  LI    N+
Sbjct: 519 FNPTLLTYNALIKCLCKNQEGDL--AEELLKEMVNKGISPDDSTYLSLIEGMGNV 571



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 208/421 (49%), Gaps = 14/421 (3%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E  D L   RD   V+ +          ++ DL L GK+  A      M   G  P+V+
Sbjct: 161 RELFDELTLSRDRLSVKSS----------IVFDL-LEGKLKKAREFIGFMEGLGFKPNVV 209

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           ++N +++     G++E A  ++  M      P+  TY + I+G C+   L++A  LF  M
Sbjct: 210 SYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM 269

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G+ PN VT+N L+   C KG L  A  +  E++          V T  +L+ + F  
Sbjct: 270 VEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG---IMPSVSTYNLLVHALFME 326

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +A  +  +M +K I  D + YN+LING+   G+   AF    +ML +G  P  +TY
Sbjct: 327 GRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTY 386

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
            +L+  L ++ ++ EA   +  +   GV+PD I +  +I G C +G++ +A   L  M  
Sbjct: 387 TSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDR 446

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           KSV P+   +N ++ G  R G +  A  + D M   G+  +  ++N LI    R G I D
Sbjct: 447 KSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKD 506

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           AF ++ EML  G  P + TYN LI   C      LA +L  EM+ +GI+PD  TY  LI+
Sbjct: 507 AFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 566

Query: 515 G 515
           G
Sbjct: 567 G 567



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 188/402 (46%), Gaps = 38/402 (9%)

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           G L+KA   I  M  +   PN  +YN  I GY     ++ A  +   M   GI P+  T+
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
             L+  +CK+G L +A                                        L++ 
Sbjct: 247 GSLISGMCKEGRLEEAS--------------------------------------GLFDK 268

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +  +  + V YN LI+G+C  GD+  AF+Y  +M+K+G +P V TYN L++ L  +G+
Sbjct: 269 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 328

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           + EA      + K G+ PD I+Y  +I G    G+  +A +    ML K + P    +  
Sbjct: 329 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTS 388

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +I    R   +  A  + + +L  GVS +V  FNA+I      G++  AF L KEM    
Sbjct: 389 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKS 448

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           + PD  T+N L+   C  G +  A  L DEM  RGI PD I+Y  LI G+  RG++K+A 
Sbjct: 449 VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAF 508

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            V  ++ ++G     + +  L K   + +E D A ++ ++ +
Sbjct: 509 XVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMV 550



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 129/240 (53%)

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
           L G +  A  +   M   GF P+V++YNT+++    +G ++ A      +   G+ PD  
Sbjct: 185 LEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 244

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y ++I G+C  G + +A      M+E  +VP    +N +IDGY   GDL  AFS RD M
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 304

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +  G+  +V T+N L+ A    G + +A  + KEM   GI PD  TYN+LI      G+ 
Sbjct: 305 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 364

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A  L++EML +GI P  +TYT LI     R  MKEA+++F KI   G++ D I F  +
Sbjct: 365 KRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 424



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 148/295 (50%), Gaps = 3/295 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G +  A   R +M++KG +P V T+N LV+ L   G + +AD +I+EM + 
Sbjct: 283 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 342

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  I GY R     +A  L + M + GI P  VT+  L++ L ++  + +A
Sbjct: 343 GIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 402

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                ++L   D   + DVI    ++D +  NG+  +A  L  +M +K++  D V +N L
Sbjct: 403 DDLFEKIL---DQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 459

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + G C  G +  A     +M  RG  PD I+YNTL++   ++G + +A      +   G 
Sbjct: 460 MQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGF 519

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
            P  ++Y  +I+ LC + +   A E L  M+ K + P+   +  +I+G G    L
Sbjct: 520 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 574



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 118/228 (51%), Gaps = 6/228 (2%)

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
           +GKL +A  F G +   G  P+ +SY TII G    G+I  AR  L +M  K + P+ + 
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +  +I G  + G L  A  + D M+  G+  N  T+N LI      G +  AFS + EM+
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             GI P V TYNLL+ A    G +  A  +  EM ++GI PD ITY  LI G+   GN K
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 524 EAEEVFAKIQTLGLAIDHIPFRIL---KKRYRRMKESDKARDIHQKWL 568
            A ++  ++ + G+   H+ +  L     R  RMKE+D   D+ +K L
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD---DLFEKIL 410



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 104/204 (50%)

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D++S K+ I    + G + KAREF+  M      P    +N II GY   G++  A  I 
Sbjct: 172 DRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRIL 231

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           D M   G+  + +T+ +LI    + G + +A  L  +M+  G+ P+  TYN LI   CN 
Sbjct: 232 DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNK 291

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G +  A    DEM+++GI P + TY  L+      G M EA+++  +++  G+  D I +
Sbjct: 292 GDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITY 351

Query: 545 RILKKRYRRMKESDKARDIHQKWL 568
            IL   Y R   + +A D+H + L
Sbjct: 352 NILINGYSRCGNAKRAFDLHNEML 375


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 219/431 (50%), Gaps = 6/431 (1%)

Query: 104 MRDTGPVRCTLETDYR--RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           + +T P +   + D+R    +  +   C   K   +L+  + M+ +G  PDV+    L+ 
Sbjct: 61  VNETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIK 120

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP 221
               +  +EKA  V+ E+ E    P+   YNA I+G+C+ + +D A  +   M   G  P
Sbjct: 121 GFFNMKKIEKAIQVM-EILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEP 179

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           + VT+NIL+   C +G L  A++ + ++L D+       VIT TIL+++    G   +A+
Sbjct: 180 DVVTYNILIGNFCGRGRLDLALRVMDQLLKDN---CKPTVITYTILIEATITQGGIDEAM 236

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            L ++M  + ++ D   YNV++NG C  G +  AF +  ++ K G +  V TYN LL  L
Sbjct: 237 KLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDL 296

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
             +GK +        +   G  P+ I+Y T+I  LC  G I +A+  L  M EK++ P+ 
Sbjct: 297 LNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDG 356

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
           + ++ +I    R G +  A    D M+S G   ++ ++N+++ +  + G+  +A ++ ++
Sbjct: 357 YSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEK 416

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           +   G  P+  +YN L GA  + G    AL +  EML  GI PD ITY  LI   C  G 
Sbjct: 417 LGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGL 476

Query: 522 MKEAEEVFAKI 532
           + +A E+   +
Sbjct: 477 VDQAIELLVDM 487



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 171/353 (48%), Gaps = 14/353 (3%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  V+  +C  G +  A     ++ + G V  V T+N L+ +L   G  E  +
Sbjct: 247 LRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGE 306

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M      PN  TY+  IT  CR  ++D+A ++   M    + P+  +++ L+ AL
Sbjct: 307 KLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISAL 366

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C++G +  A++FL ++++   G    D+++   ++ S  KNG+  +AL ++  + +    
Sbjct: 367 CREGKVDLAIEFLDDMIS---GGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCP 423

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +  +YN L      +GD   A     +ML  G  PD ITYN+L++CLC+ G +D+A   
Sbjct: 424 PNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIEL 483

Query: 354 -YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
              +       P  ISY T++ GLC    I+ A E L +M+ +  +P    + ++I G G
Sbjct: 484 LVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIG 543

Query: 413 RCGDLSNAFSIRDLMLSF-GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
             G   +A  + +L+++   +S + F          R   IF  F   KE+ L
Sbjct: 544 FAGWRYDAMELANLLVNMDAISEDSF---------KRFQKIFPVFDAHKELAL 587



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 151/338 (44%), Gaps = 39/338 (11%)

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK     +++ FL  ++   +     DVI  T L+  +F N  K +      ++ +K+ +
Sbjct: 88  CKSAKYDESLYFLQHMV---NRGYKPDVILCTKLIKGFF-NMKKIEKAIQVMEILEKHGK 143

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+ AYN +I+GFC    +  A     +M KRGF PDV+TYN L+   C +G+LD A   
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              L K    P  I+Y  +I+     G I +A + L  ML + + P+ + +NV+++G  +
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCK 263

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G L  AF     +   G  + V T+N L+      G       L  +ML+ G  P+  T
Sbjct: 264 EGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPIT 323

Query: 474 YNLL-----------------------------------IGASCNLGHIHLALQLYDEML 498
           Y+ L                                   I A C  G + LA++  D+M+
Sbjct: 324 YSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMI 383

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
             G  PDI++Y  ++   C  GN  EA  +F K+  +G
Sbjct: 384 SGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVG 421



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 1/261 (0%)

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +N  C +     +  +   M+ RG+ PDVI    L+       K+++A     +L K G 
Sbjct: 84  LNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG- 142

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  +Y  +I G C    +  A + L  M ++   P+   +N++I  +   G L  A  
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALR 202

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D +L       V T+  LI A    G I +A  L  EML  G+ PD +TYN+++   C
Sbjct: 203 VMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMC 262

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +  A +    + + G    + TY  L++     G  +  E++ + +   G   + I
Sbjct: 263 KEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPI 322

Query: 543 PFRILKKRYRRMKESDKARDI 563
            +  L     R  + D+A+++
Sbjct: 323 TYSTLITALCRDGKIDEAKNV 343


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 207/432 (47%), Gaps = 6/432 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ LC   ++ TA+ +  +M  +G  PD  T   L+    + G +E A  V   M EM 
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            S    T N  I GYC++  ++ AL        +G  P+++T+N  V+ LC+   +G A+
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K +  ++ +       DV T  I+++   KNG   +A  + N M  +    DI  +N LI
Sbjct: 307 KVMDVMVQEGH---DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
              C    +  A     Q+  +G  PDV T+N L+N LCK G    A   +  +  +G  
Sbjct: 364 AALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 423

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI-WNVIIDGYGRCGDLSNAFS 422
           PD+++Y T+I  LC  G + KA + L  M E +  P   I +N IIDG  +   +  A  
Sbjct: 424 PDEVTYNTLIDNLCSLGKLGKALDLLKDM-ESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M   G+S N  TFN LI    +   I DAF L  +M+ +G+ P+  TYN ++   C
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYC 542

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G I  A  + + M   G   D++TY  LI G C  G  + A +V   ++  G+     
Sbjct: 543 KQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPK 602

Query: 543 PFR-ILKKRYRR 553
            +  +L+  +RR
Sbjct: 603 AYNPVLQSLFRR 614



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 204/416 (49%), Gaps = 3/416 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I  AL ++ +M++ G     +T N L+N  CK+G +E A   I++       P+  TY
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N F+ G C+ + +  AL +   M   G  P+  T+NI+V+ LCK G L +A   L +++ 
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV- 348

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             D     D+ T   L+ +        +AL L   +  K +  D+  +N+LIN  C  GD
Sbjct: 349 --DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 406

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A   F +M   G  PD +TYNTL++ LC  GKL +A      +  TG     I+Y T
Sbjct: 407 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 466

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           II GLC    I +A E    M  + +      +N +IDG  +   + +AF + + M+S G
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N  T+N+++    + G I  A  + + M  +G   DV TY  LI   C  G   +AL
Sbjct: 527 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++   M  +G+ P    Y  +++    R N+++A  +F ++  +G   D + ++I+
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIV 642



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 202/420 (48%), Gaps = 3/420 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           L  G K+     +  +M  +G  PDV+T N L+  LC+   +  A  ++ EMS    +P+
Sbjct: 156 LVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPD 215

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             T+   + G+     ++ AL + + M   G    +VT N+L++  CK G + DA+ ++ 
Sbjct: 216 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 275

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           + +AD       D IT    ++   +N     AL + + M Q+    D+  YN+++N  C
Sbjct: 276 QEIADG---FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 332

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            NG +  A     QM+ RG LPD+ T+NTL+  LC   +L+EA      ++  GV+PD  
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 392

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           ++  +I  LC  GD   A      M      P+   +N +ID     G L  A  +   M
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
            S G   +  T+N +I    +   I +A  +  +M L GI  +  T+N LI   C    I
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A +L ++M+  G+ P+ ITY  ++  +C +G++K+A ++   +   G  +D + +  L
Sbjct: 513 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 572



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 193/403 (47%), Gaps = 4/403 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            E D   +   +  LC    +G AL +   M+Q+G  PDV T+N +VN LCK G LE+A 
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M +    P+  T+N  I   C  N L++AL L   +   G+ P+  T NIL++AL
Sbjct: 342 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINAL 401

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G    A++   E+    +   T D +T   L+D+    G   +AL L  DM      
Sbjct: 402 CKVGDPHLALRLFEEM---KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCP 458

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
              + YN +I+G C    I  A   F QM  +G   + IT+NTL++ LCK  K+D+A   
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 518

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+ P+ I+Y +I+   C  GDI KA + L +M       +   +  +I+G  +
Sbjct: 519 INQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCK 578

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G    A  +   M   G+      +N ++ +  R  +I DA SL +EM   G  PD  T
Sbjct: 579 AGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALT 638

Query: 474 YNLLIGASC-NLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           Y ++    C   G I  A     EM+ +G  P+  ++  L +G
Sbjct: 639 YKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 181/363 (49%), Gaps = 4/363 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC  G++  A  +  +M+ +G +PD+ T N L+  LC    LE+A  + R+++   
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP+  T+N  I   C+V +   AL LF  M N+G  P+ VT+N L+  LC  G LG A+
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++ +    ++T   IT   ++D   K     +A  +++ M  + I  + + +N LI
Sbjct: 447 DLLKDMESTGCPRST---ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C +  I  AF    QM+  G  P+ ITYN++L   CKQG + +A+     ++  G  
Sbjct: 504 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D ++Y T+I GLC  G    A + L  M  K + P P  +N ++    R  ++ +A S+
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 623

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGS-IFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
              M   G   +  T+  +     RGG  I +AF    EM+  G  P+  ++ +L     
Sbjct: 624 FREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683

Query: 483 NLG 485
           NLG
Sbjct: 684 NLG 686



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 198/416 (47%), Gaps = 3/416 (0%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G   D + +N+L+N L +   ++  + V  EM      P+  T+N  +   CR +++  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + +   M++ G+ P+  T   L+    ++G +  A++    +L   +   ++  +T  +L
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML---EMGCSATKVTVNVL 257

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           ++ Y K G    AL           + D + YN  +NG C N  +  A      M++ G 
Sbjct: 258 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PDV TYN ++NCLCK G+L+EA      +   G  PD  ++ T+I  LC    + +A +
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               +  K V P+ + +N++I+   + GD   A  + + M + G + +  T+N LI    
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G +  A  L K+M   G      TYN +I   C    I  A +++D+M  +GI+ + I
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 497

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           T+  LI G C    + +A E+  ++ + GL  ++I +  +   Y +  +  KA DI
Sbjct: 498 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 203/427 (47%), Gaps = 4/427 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G++  AL   ++ I  G  PD +T+N  VN LC+   +  A  V+  M +  
Sbjct: 257 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYN  +   C+  +L++A  + + M + G  P+  T N L+ ALC    L +A+
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               +V        + DV T  IL+++  K GD   AL L+ +M       D V YN LI
Sbjct: 377 DLARQVTVKG---VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G +  A      M   G     ITYNT+++ LCK+ +++EA   +  +   G++
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            + I++ T+I GLC    I  A E +  M+ + + P    +N I+  Y + GD+  A  I
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M + G   +V T+  LI    + G    A  + + M + G+ P    YN ++ +   
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHC-ARGNMKEAEEVFAKIQTLGLAIDHI 542
             +I  AL L+ EM   G  PD +TY  + +G C   G +KEA +   ++   G   +  
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673

Query: 543 PFRILKK 549
            FR+L +
Sbjct: 674 SFRMLAE 680



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 190/389 (48%), Gaps = 7/389 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P    +  ++ +L  +G L+    ++ EM            ++F+  Y      D A+ L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 211 FSTMANN--GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTIL 267
                    GI+ + V +N L++ L +    G  +K L  V ++   +    DV+T   L
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVE----GSKMKLLESVYSEMGARGIKPDVVTFNTL 187

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           M +  +      A+ +  +M  + +  D   +  L+ GF   G I +A     +ML+ G 
Sbjct: 188 MKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGC 247

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
               +T N L+N  CK G++++A  +       G  PDQI+Y T + GLC +  +  A +
Sbjct: 248 SATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALK 307

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            +  M+++   P+   +N++++   + G L  A  I + M+  G   ++ TFN LI A  
Sbjct: 308 VMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALC 367

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
            G  + +A  L +++ + G+ PDV+T+N+LI A C +G  HLAL+L++EM   G TPD +
Sbjct: 368 TGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEV 427

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           TY  LI   C+ G + +A ++   +++ G
Sbjct: 428 TYNTLIDNLCSLGKLGKALDLLKDMESTG 456



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 6/346 (1%)

Query: 205 DKALHLF-STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           D AL +  + +A +   P    +  ++  L   G L D +K L   +  +  +    V+ 
Sbjct: 55  DAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGAL-DLMKVLVAEMRREGHQVKLGVVH 113

Query: 264 STILMDSYFKNGDKFQALALWNDMFQK--NIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           S   +DSY        A+ L  +  Q    IQ D V YN L+N       +    + + +
Sbjct: 114 S--FLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSE 171

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M  RG  PDV+T+NTL+  LC+  ++  A      +S  GVAPD+ ++ T++QG    G 
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           I  A      MLE          NV+I+GY + G + +A       ++ G   +  T+N 
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
            +    +   +  A  +   M+ +G  PDVFTYN+++   C  G +  A  + ++M+ RG
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             PDI T+  LI   C    ++EA ++  ++   G++ D   F IL
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL 397



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 122/256 (47%), Gaps = 9/256 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L + LD LK M  TG  R T+  +      +I  LC   +I  A  +  +M  +G   + 
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYN-----TIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T N L++ LCK   ++ A  +I +M      PN  TYN+ +T YC+  ++ KA  +  T
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  NG   + VT+  L++ LCK G    A+K L  +     G   +    + +L  S F+
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK--GMRPTPKAYNPVL-QSLFR 613

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG-DISSAFAYFCQMLKRGFLPDVI 332
             +   AL+L+ +M +     D + Y ++  G C  G  I  AF +  +M+ +GF+P+  
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673

Query: 333 TYNTLLNCLCKQGKLD 348
           ++  L   L   G  D
Sbjct: 674 SFRMLAEGLLNLGMDD 689



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 3/227 (1%)

Query: 337 LLNCLCKQGKLDEASHFY-GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           LL  L +Q   D A       L++   AP    Y+ II+ L   G +   +  +  M  +
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSI--RDLMLSFGVSSNVFTFNALILAETRGGSIF 453
               +  + +  +D Y       +A  +    L   FG+ ++   +N L+     G  + 
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
              S+  EM   GI PDV T+N L+ A C    +  A+ + +EM  RG+ PD  T+T L+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           +G    G+++ A  V A++  +G +   +   +L   Y ++   + A
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 270


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 207/433 (47%), Gaps = 6/433 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +++ LC   ++ TA+ +  +M  +G  PD  T   L+    + G +E A  V   M EM
Sbjct: 94  TLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEM 153

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             S    T N  I GYC++  ++ AL        +G  P+++T+N  V+ LC+   +G A
Sbjct: 154 GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHA 213

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K +  ++ +       DV T  I+++   KNG   +A  + N M  +    DI  +N L
Sbjct: 214 LKVMDVMVQEGH---DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 270

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I   C    +  A     Q+  +G  PDV T+N L+N LCK G    A   +  +  +G 
Sbjct: 271 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 330

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI-WNVIIDGYGRCGDLSNAF 421
            PD+++Y T+I  LC  G + KA + L  M E +  P   I +N IIDG  +   +  A 
Sbjct: 331 TPDEVTYNTLIDNLCSLGKLGKALDLLKDM-ESTGCPRSTITYNTIIDGLCKKMRIEEAE 389

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + D M   G+S N  TFN LI    +   I DAF L  +M+ +G+ P+  TYN ++   
Sbjct: 390 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHY 449

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C  G I  A  + + M   G   D++TY  LI G C  G  + A +V   ++  G+    
Sbjct: 450 CKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTP 509

Query: 542 IPFR-ILKKRYRR 553
             +  +L+  +RR
Sbjct: 510 KAYNPVLQSLFRR 522



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 204/416 (49%), Gaps = 3/416 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I  AL ++ +M++ G     +T N L+N  CK+G +E A   I++       P+  TY
Sbjct: 138 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 197

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N F+ G C+ + +  AL +   M   G  P+  T+NI+V+ LCK G L +A   L +++ 
Sbjct: 198 NTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV- 256

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             D     D+ T   L+ +        +AL L   +  K +  D+  +N+LIN  C  GD
Sbjct: 257 --DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 314

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A   F +M   G  PD +TYNTL++ LC  GKL +A      +  TG     I+Y T
Sbjct: 315 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 374

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           II GLC    I +A E    M  + +      +N +IDG  +   + +AF + + M+S G
Sbjct: 375 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 434

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N  T+N+++    + G I  A  + + M  +G   DV TY  LI   C  G   +AL
Sbjct: 435 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 494

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++   M  +G+ P    Y  +++    R N+++A  +F ++  +G   D + ++I+
Sbjct: 495 KVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIV 550



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 202/420 (48%), Gaps = 3/420 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           L  G K+     +  +M  +G  PDV+T N L+  LC+   +  A  ++ EMS    +P+
Sbjct: 64  LVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPD 123

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             T+   + G+     ++ AL + + M   G    +VT N+L++  CK G + DA+ ++ 
Sbjct: 124 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 183

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           + +AD       D IT    ++   +N     AL + + M Q+    D+  YN+++N  C
Sbjct: 184 QEIADG---FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 240

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            NG +  A     QM+ RG LPD+ T+NTL+  LC   +L+EA      ++  GV+PD  
Sbjct: 241 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 300

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           ++  +I  LC  GD   A      M      P+   +N +ID     G L  A  +   M
Sbjct: 301 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 360

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
            S G   +  T+N +I    +   I +A  +  +M L GI  +  T+N LI   C    I
Sbjct: 361 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 420

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A +L ++M+  G+ P+ ITY  ++  +C +G++K+A ++   +   G  +D + +  L
Sbjct: 421 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 480



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 193/403 (47%), Gaps = 4/403 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            E D   +   +  LC    +G AL +   M+Q+G  PDV T+N +VN LCK G LE+A 
Sbjct: 190 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 249

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M +    P+  T+N  I   C  N L++AL L   +   G+ P+  T NIL++AL
Sbjct: 250 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINAL 309

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G    A++   E+    +   T D +T   L+D+    G   +AL L  DM      
Sbjct: 310 CKVGDPHLALRLFEEM---KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCP 366

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
              + YN +I+G C    I  A   F QM  +G   + IT+NTL++ LCK  K+D+A   
Sbjct: 367 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 426

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+ P+ I+Y +I+   C  GDI KA + L +M       +   +  +I+G  +
Sbjct: 427 INQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCK 486

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G    A  +   M   G+      +N ++ +  R  +I DA SL +EM   G  PD  T
Sbjct: 487 AGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALT 546

Query: 474 YNLLIGASC-NLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           Y ++    C   G I  A     EM+ +G  P+  ++  L +G
Sbjct: 547 YKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 589



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 181/363 (49%), Gaps = 4/363 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC  G++  A  +  +M+ +G +PD+ T N L+  LC    LE+A  + R+++   
Sbjct: 235 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 294

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP+  T+N  I   C+V +   AL LF  M N+G  P+ VT+N L+  LC  G LG A+
Sbjct: 295 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 354

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++ +    ++T   IT   ++D   K     +A  +++ M  + I  + + +N LI
Sbjct: 355 DLLKDMESTGCPRST---ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 411

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C +  I  AF    QM+  G  P+ ITYN++L   CKQG + +A+     ++  G  
Sbjct: 412 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 471

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D ++Y T+I GLC  G    A + L  M  K + P P  +N ++    R  ++ +A S+
Sbjct: 472 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 531

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGS-IFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
              M   G   +  T+  +     RGG  I +AF    EM+  G  P+  ++ +L     
Sbjct: 532 FREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 591

Query: 483 NLG 485
           NLG
Sbjct: 592 NLG 594



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 198/416 (47%), Gaps = 3/416 (0%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G   D + +N+L+N L +   ++  + V  EM      P+  T+N  +   CR +++  A
Sbjct: 49  GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + +   M++ G+ P+  T   L+    ++G +  A++    +L   +   ++  +T  +L
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML---EMGCSATKVTVNVL 165

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           ++ Y K G    AL           + D + YN  +NG C N  +  A      M++ G 
Sbjct: 166 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 225

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PDV TYN ++NCLCK G+L+EA      +   G  PD  ++ T+I  LC    + +A +
Sbjct: 226 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 285

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               +  K V P+ + +N++I+   + GD   A  + + M + G + +  T+N LI    
Sbjct: 286 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 345

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G +  A  L K+M   G      TYN +I   C    I  A +++D+M  +GI+ + I
Sbjct: 346 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 405

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           T+  LI G C    + +A E+  ++ + GL  ++I +  +   Y +  +  KA DI
Sbjct: 406 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 461



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 203/428 (47%), Gaps = 4/428 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G++  AL   ++ I  G  PD +T+N  VN LC+   +  A  V+  M + 
Sbjct: 164 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 223

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  +   C+  +L++A  + + M + G  P+  T N L+ ALC    L +A
Sbjct: 224 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 283

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    +V        + DV T  IL+++  K GD   AL L+ +M       D V YN L
Sbjct: 284 LDLARQVTVKG---VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 340

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+  C  G +  A      M   G     ITYNT+++ LCK+ +++EA   +  +   G+
Sbjct: 341 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 400

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           + + I++ T+I GLC    I  A E +  M+ + + P    +N I+  Y + GD+  A  
Sbjct: 401 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 460

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I + M + G   +V T+  LI    + G    A  + + M + G+ P    YN ++ +  
Sbjct: 461 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 520

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC-ARGNMKEAEEVFAKIQTLGLAIDH 541
              +I  AL L+ EM   G  PD +TY  + +G C   G +KEA +   ++   G   + 
Sbjct: 521 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEF 580

Query: 542 IPFRILKK 549
             FR+L +
Sbjct: 581 SSFRMLAE 588



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 122/256 (47%), Gaps = 9/256 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L + LD LK M  TG  R T+  +      +I  LC   +I  A  +  +M  +G   + 
Sbjct: 350 LGKALDLLKDMESTGCPRSTITYN-----TIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 404

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T N L++ LCK   ++ A  +I +M      PN  TYN+ +T YC+  ++ KA  +  T
Sbjct: 405 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 464

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  NG   + VT+  L++ LCK G    A+K L  +     G   +    + +L  S F+
Sbjct: 465 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK--GMRPTPKAYNPVL-QSLFR 521

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG-DISSAFAYFCQMLKRGFLPDVI 332
             +   AL+L+ +M +     D + Y ++  G C  G  I  AF +  +M+ +GF+P+  
Sbjct: 522 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 581

Query: 333 TYNTLLNCLCKQGKLD 348
           ++  L   L   G  D
Sbjct: 582 SFRMLAEGLLNLGMDD 597



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 66/131 (50%)

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
           FG+ ++   +N L+     G  +    S+  EM   GI PDV T+N L+ A C    +  
Sbjct: 48  FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 107

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A+ + +EM  RG+ PD  T+T L++G    G+++ A  V A++  +G +   +   +L  
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 167

Query: 550 RYRRMKESDKA 560
            Y ++   + A
Sbjct: 168 GYCKLGRVEDA 178


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 218/457 (47%), Gaps = 43/457 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V++ LC+  ++ +A  L R M + G VP+ + +  L++ L +   + +A  ++ EM  M 
Sbjct: 224 VMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMG 283

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T+N  I G C+VN++  A  L   M   G  P+ +T+  L+H LC+ G L +A 
Sbjct: 284 CMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEAR 343

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND-MFQKNIQTDIVAYNVL 302
           K L ++         ++ I +T L++ Y  +G   +A +  N+ M     Q DI  YN+L
Sbjct: 344 KILIKI------PCPNNAILNT-LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNIL 396

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G C  G +S A     +M +RG  P+VITY  L+N LCK G L+EA      +S  G+
Sbjct: 397 MHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGL 456

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             + + Y  +I  LC    +  A   L  M  K   P+   +N +I G  +   +  AF 
Sbjct: 457 TINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFR 516

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   ML  G  +N  T+N LI A  R G+   A +L  +ML  G   D  TYN LI A C
Sbjct: 517 LFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFC 576

Query: 483 NLGHIHLALQLYDEM-----------------------------------LRRGITPDII 507
            +G+I   L+LY++M                                   + RG  PDI+
Sbjct: 577 KVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIV 636

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           TY  ++ G C  G +KEA  +F ++Q  G+  D   +
Sbjct: 637 TYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTY 673



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 215/440 (48%), Gaps = 10/440 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC   KI  A  L  +M+ +G  PD +T+ +L++ LC+IG L +A  ++ ++    
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI---- 349

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFS-TMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           P PN A  N  I GY    +L +A    + TM N G +P+  T+NIL+H LCK+G L  A
Sbjct: 350 PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFA 409

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              + E+          +VIT  IL++   K G   +A  + ++M  + +  + V YN L
Sbjct: 410 RDLVNEM---SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCL 466

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I   C    +  A     +M  +G  PD+ TYN+L+  LCK  ++DEA   +  +   G 
Sbjct: 467 ICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGA 526

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             + ++Y T+I  L   G   KA   +  ML +    +   +N +I  + + G++     
Sbjct: 527 VANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLE 586

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M+  G+ ++  + N +I    + G + +AF   ++ +  G  PD+ TYN ++   C
Sbjct: 587 LYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLC 646

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            +G I  AL L+D +   G+ PD  TY   I   C  G + +A   F +    G    ++
Sbjct: 647 KVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNL 706

Query: 543 PFRILKKRYRRMKESDKARD 562
            + +L   Y  +K+S++  +
Sbjct: 707 TWNVLV--YTLLKQSNQENN 724



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 179/378 (47%), Gaps = 40/378 (10%)

Query: 85  AVFNAL--DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRR 142
           A+ N L    ++   L   ++  +   +    + D   +  ++  LC  G +  A  L  
Sbjct: 355 AILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVN 414

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS---------------------- 180
           +M ++G  P+V+T+  LVN LCK G LE+A  V+ EMS                      
Sbjct: 415 EMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKE 474

Query: 181 ----------EMRPS---PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
                     EM      P+  TYN+ I G C+V+ +D+A  LF  M  +G   N VT+N
Sbjct: 475 KVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYN 534

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            L+HAL ++G    A+  + ++L       T D IT   L+ ++ K G+  + L L+  M
Sbjct: 535 TLIHALLRRGAFQKALTLVNDMLFRG---CTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
               +  D ++ N++ING C  G + +AF +    + RGF+PD++TYN++LN LCK G++
Sbjct: 592 IMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRI 651

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            EA + +  L   GV PD  +Y T I   C  G +  A  F    +E   VP    WNV+
Sbjct: 652 KEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVL 711

Query: 408 IDGYGRCGDLSNAFSIRD 425
           +    +  +  N F + D
Sbjct: 712 VYTLLKQSNQENNFFVLD 729



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 146/580 (25%), Positives = 243/580 (41%), Gaps = 44/580 (7%)

Query: 8   GESSSPVHIQI-------LRFLYQTFDSIKLNVARIFSNSRTCSDDDNLPC---TLNDIM 57
           G+ S P+ + +          L + FD  KL  +RI            LP    TL +I 
Sbjct: 40  GDGSDPIKMNVESEPATEWESLLEPFDLTKLRKSRILITPVQLCKLLELPLDVPTLLEIF 99

Query: 58  SYVGDQ---CRSKTRHW-FSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCT 113
             VG Q   C +   ++ F NK           F  +D +L +       M++ G V   
Sbjct: 100 ERVGGQKGYCHTFDVYYVFINKLG-----AIGKFKLIDKLLMQ-------MKEEGIV--- 144

Query: 114 LETDYRRHVAVI--RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
               +R  + +I  +     G+ G A+ L   M              LV E+   G+  +
Sbjct: 145 ----FRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQ 200

Query: 172 -ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A +V  +M     SP   T+   +   C  NE+D A  L   M  +G  PN + +  L+
Sbjct: 201 VATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLI 260

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           HAL +K  + +A+K L E+          DV T   ++    K      A  L + M  +
Sbjct: 261 HALSQKNQVSEALKLLEEMFVMG---CMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLR 317

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
               D + Y  L++G C  G ++ A     ++L +   P+    NTL+N     G+L EA
Sbjct: 318 GFYPDNMTYGFLLHGLCRIGKLNEAR----KILIKIPCPNNAILNTLINGYVMSGQLKEA 373

Query: 351 SHFYG-VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
             F    +   G  PD  +Y  ++ GLC  G +  AR+ +  M  +   P    + ++++
Sbjct: 374 QSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVN 433

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  + G L  A  +   M + G++ N   +N LI A  R   +  A +L  EM   G  P
Sbjct: 434 GLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKP 493

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D+FTYN LI   C +  I  A +L+  ML  G   + +TY  LI     RG  ++A  + 
Sbjct: 494 DLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLV 553

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
             +   G  +D I +  L K + ++   +K  +++++ ++
Sbjct: 554 NDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIM 593


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 218/457 (47%), Gaps = 43/457 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V++ LC+  ++ +A  L R M + G VP+ + +  L++ L +   + +A  ++ EM  M 
Sbjct: 224 VMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMG 283

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T+N  I G C+VN++  A  L   M   G  P+ +T+  L+H LC+ G L +A 
Sbjct: 284 CMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEAR 343

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND-MFQKNIQTDIVAYNVL 302
           K L ++         ++ I +T L++ Y  +G   +A +  N+ M     Q DI  YN+L
Sbjct: 344 KILIKI------PCPNNAILNT-LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNIL 396

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G C  G +S A     +M +RG  P+VITY  L+N LCK G L+EA      +S  G+
Sbjct: 397 MHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGL 456

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             + + Y  +I  LC    +  A   L  M  K   P+   +N +I G  +   +  AF 
Sbjct: 457 TINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFR 516

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   ML  G  +N  T+N LI A  R G+   A +L  +ML  G   D  TYN LI A C
Sbjct: 517 LFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFC 576

Query: 483 NLGHIHLALQLYDEM-----------------------------------LRRGITPDII 507
            +G+I   L+LY++M                                   + RG  PDI+
Sbjct: 577 KVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIV 636

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           TY  ++ G C  G +KEA  +F ++Q  G+  D   +
Sbjct: 637 TYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTY 673



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 215/440 (48%), Gaps = 10/440 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC   KI  A  L  +M+ +G  PD +T+ +L++ LC+IG L +A  ++ ++    
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI---- 349

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFS-TMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           P PN A  N  I GY    +L +A    + TM N G +P+  T+NIL+H LCK+G L  A
Sbjct: 350 PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFA 409

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              + E+          +VIT  IL++   K G   +A  + ++M  + +  + V YN L
Sbjct: 410 RDLVNEM---SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCL 466

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I   C    +  A     +M  +G  PD+ TYN+L+  LCK  ++DEA   +  +   G 
Sbjct: 467 ICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGA 526

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             + ++Y T+I  L   G   KA   +  ML +    +   +N +I  + + G++     
Sbjct: 527 VANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLE 586

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M+  G+ ++  + N +I    + G + +AF   ++ +  G  PD+ TYN ++   C
Sbjct: 587 LYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLC 646

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            +G I  AL L+D +   G+ PD  TY   I   C  G + +A   F +    G    ++
Sbjct: 647 KVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNL 706

Query: 543 PFRILKKRYRRMKESDKARD 562
            + +L   Y  +K+S++  +
Sbjct: 707 TWNVLV--YTLLKQSNQENN 724



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 179/378 (47%), Gaps = 40/378 (10%)

Query: 85  AVFNAL--DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRR 142
           A+ N L    ++   L   ++  +   +    + D   +  ++  LC  G +  A  L  
Sbjct: 355 AILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVN 414

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS---------------------- 180
           +M ++G  P+V+T+  LVN LCK G LE+A  V+ EMS                      
Sbjct: 415 EMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKE 474

Query: 181 ----------EMRPS---PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
                     EM      P+  TYN+ I G C+V+ +D+A  LF  M  +G   N VT+N
Sbjct: 475 KVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYN 534

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            L+HAL ++G    A+  + ++L       T D IT   L+ ++ K G+  + L L+  M
Sbjct: 535 TLIHALLRRGAFQKALTLVNDMLFRG---CTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
               +  D ++ N++ING C  G + +AF +    + RGF+PD++TYN++LN LCK G++
Sbjct: 592 IMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRI 651

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            EA + +  L   GV PD  +Y T I   C  G +  A  F    +E   VP    WNV+
Sbjct: 652 KEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVL 711

Query: 408 IDGYGRCGDLSNAFSIRD 425
           +    +  +  N F + D
Sbjct: 712 VYTLLKQSNQENNFFVLD 729



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 187/413 (45%), Gaps = 9/413 (2%)

Query: 159 LVNELCKIGDLEK-ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
           LV E+   G+  + A +V  +M     SP   T+   +   C  NE+D A  L   M  +
Sbjct: 188 LVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKH 247

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G  PN + +  L+HAL +K  + +A+K L E+          DV T   ++    K    
Sbjct: 248 GCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMG---CMPDVQTFNDVIHGLCKVNKI 304

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             A  L + M  +    D + Y  L++G C  G ++ A     ++L +   P+    NTL
Sbjct: 305 HDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEAR----KILIKIPCPNNAILNTL 360

Query: 338 LNCLCKQGKLDEASHFYG-VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           +N     G+L EA  F    +   G  PD  +Y  ++ GLC  G +  AR+ +  M  + 
Sbjct: 361 INGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG 420

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P    + ++++G  + G L  A  +   M + G++ N   +N LI A  R   +  A 
Sbjct: 421 CEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVAL 480

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
           +L  EM   G  PD+FTYN LI   C +  I  A +L+  ML  G   + +TY  LI   
Sbjct: 481 NLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHAL 540

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
             RG  ++A  +   +   G  +D I +  L K + ++   +K  +++++ ++
Sbjct: 541 LRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIM 593



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 86/235 (36%), Gaps = 71/235 (30%)

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA-------- 420
           Y   I  L   G      + L+ M E+ +V    I+ +I+  YG+ G    A        
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMR 174

Query: 421 --------FSIRDL--------------------MLSFGVSSNVFTF------------- 439
                   F   DL                    MLS GVS  VFTF             
Sbjct: 175 AVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEV 234

Query: 440 ----------------------NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
                                   LI A ++   + +A  L +EM + G  PDV T+N +
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           I   C +  IH A +L D ML RG  PD +TY  L+ G C  G + EA ++  KI
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI 349


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 205/419 (48%), Gaps = 2/419 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  AL     M   G  PDV+T+N L+   C+ G L +A  ++  M +   +P  
Sbjct: 221 CSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTR 280

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
           ATYN  ++ Y R+  + +A ++   M   G  P+  T+N+L   LC+ G + +A K   E
Sbjct: 281 ATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDE 340

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +  +     + DV+T   L+D+ FK      AL L  +M  K +++ +V +N+++ G C 
Sbjct: 341 M--EHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCR 398

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G +  A      M + G  PDVITYNTL++  CK   + +A      + ++G+  D  +
Sbjct: 399 EGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFT 458

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
             T++  LC      +A E L S  ++  VP+   +  ++  Y +      A  + D M 
Sbjct: 459 LNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMS 518

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
              ++ +++T+N LI      G + +A     E++  G+ PD  TYN++I A C  G + 
Sbjct: 519 KRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLE 578

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            A Q +++ML     PD++T   L+ G C  G +++A ++F      G  +D I +  L
Sbjct: 579 KAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTL 637



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 230/498 (46%), Gaps = 44/498 (8%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L + L  L TM+  G     L  D   +  +++  C  G +G A  L  +M ++G  P  
Sbjct: 226 LADALSTLSTMQGFG-----LSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTR 280

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA------ 207
            T+N LV+   ++G +++A +V+  M+     P+  TYN    G C+  ++D+A      
Sbjct: 281 ATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDE 340

Query: 208 ------------------------------LHLFSTMANNGIRPNRVTHNILVHALCKKG 237
                                         L+L   M + G++ + VTHNI+V  LC++G
Sbjct: 341 MEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREG 400

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            L +A+  L   +  ++G A  DVIT   L+D+Y K  +  +A  L ++M +  ++ D  
Sbjct: 401 QLEEALGRLK--MMTEEGLA-PDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTF 457

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
             N L+   C       A        +RGF+PD ++Y T++    K+ K + A + +  +
Sbjct: 458 TLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEM 517

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
           SK  + P   +Y T+I+GLC  G + +A + L  +++K +VP+   +N+II  Y + GDL
Sbjct: 518 SKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDL 577

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             AF   + ML      +V T N L+      G +  A  L +     G   DV TYN L
Sbjct: 578 EKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTL 637

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I A C  G +  AL  + +M  RG+ PD  TY  ++      G  +EA+ +  K+   G 
Sbjct: 638 IQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGK 697

Query: 538 AIDHIPFRILKKRYRRMK 555
             +   + ++K     +K
Sbjct: 698 LSERFSYPLIKSSAEEVK 715



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 191/395 (48%), Gaps = 4/395 (1%)

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V R +  +R  PN  T+N  +  +C    L  AL   STM   G+ P+ VT+N L+ A C
Sbjct: 197 VFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHC 256

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           +KG+LG+A   L  +    +G A +    +T L+ +Y + G   QA  +   M     + 
Sbjct: 257 RKGMLGEARTLLARM--KKEGIAPTRATYNT-LVSAYARLGWIKQATNVVEAMTAFGFEP 313

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL-PDVITYNTLLNCLCKQGKLDEASHF 353
           D+  YNVL  G C  G +  AF    +M     + PDV+TYNTL++   K  +  +A + 
Sbjct: 314 DLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNL 373

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   GV    +++  +++GLC  G + +A   L  M E+ + P+   +N +ID Y +
Sbjct: 374 LEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCK 433

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             +++ AF + D M+  G+  + FT N L+    +     +A  L +     G  PD  +
Sbjct: 434 ARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVS 493

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  ++ A         AL L+DEM +R +TP I TY  LIKG C  G + EA +   ++ 
Sbjct: 494 YGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELM 553

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             GL  D   + I+   Y +  + +KA   H K L
Sbjct: 554 KKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKML 588



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 199/419 (47%), Gaps = 39/419 (9%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL L  +M  KG    ++THN +V  LC+ G LE+A   ++ M+E   +P+  TYN  I 
Sbjct: 370 ALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLID 429

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            YC+   + KA  L   M  +G++ +  T N L++ LCK+    +A + L    +     
Sbjct: 430 AYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLR---SPPQRG 486

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D ++   +M +YFK      AL LW++M ++ +   I  YN LI G C  G ++ A 
Sbjct: 487 FVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAI 546

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +++K+G +PD  TYN +++  CK+G L++A  F+  + +    PD ++  T++ GL
Sbjct: 547 DKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGL 606

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C+HG + KA +   S  EK    +   +N +I    + GD+  A      M + G+  + 
Sbjct: 607 CLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDA 666

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS--------------- 481
           FT+N ++ A +  G   +A ++  ++   G   + F+Y L+  ++               
Sbjct: 667 FTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDC 726

Query: 482 ---------------------CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
                                C  G +  A  + DEM+++G++ D  TY  L++G   R
Sbjct: 727 ESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKR 785



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 164/390 (42%), Gaps = 43/390 (11%)

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRV--NELDKALHLFSTMANNGIRPNRVTHNILVH 231
           H  R    +RPS   A  NA ++   R        +L +F ++    + PN  T N+LVH
Sbjct: 161 HSFRRRGHVRPSLQAA--NAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVH 218

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
             C KG L DA                                      L+  + M    
Sbjct: 219 THCSKGTLADA--------------------------------------LSTLSTMQGFG 240

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           +  D+V YN L+   C  G +  A     +M K G  P   TYNTL++   + G + +A+
Sbjct: 241 LSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQAT 300

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV-PEPHIWNVIIDG 410
           +    ++  G  PD  +Y  +  GLC  G + +A +    M   S+V P+   +N ++D 
Sbjct: 301 NVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDA 360

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             +    S+A ++ + M   GV S++ T N ++    R G + +A    K M  +G+ PD
Sbjct: 361 CFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPD 420

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V TYN LI A C   ++  A  L DEM+R G+  D  T   L+   C     +EAEE+  
Sbjct: 421 VITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLR 480

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
                G   D + +  +   Y +  + + A
Sbjct: 481 SPPQRGFVPDEVSYGTVMAAYFKENKPEPA 510



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 45/291 (15%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC  GK+  A+    ++++KG VPD  T+N +++  CK GDLEKA     +M E  
Sbjct: 532 LIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENY 591

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T N  + G C   +L+KA+ LF + A  G + + +T+N L+ ALCK        
Sbjct: 592 FKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCK-------- 643

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
                                         +GD   AL  + DM  + +Q D   YNV++
Sbjct: 644 ------------------------------DGDVDTALHFFADMEARGLQPDAFTYNVVL 673

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL--CKQGKLDEASH--FYGVLSK 359
           +     G    A     ++ + G L +  +Y  + +     K GK  E       G  +K
Sbjct: 674 SALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAK 733

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            G   DQ SY   ++ LC+ G + +A+  L  M++K +  +   +  +++G
Sbjct: 734 GG---DQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEG 781


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 223/449 (49%), Gaps = 3/449 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ +C  GK+     L      KG +P+++ +N ++   CK+GD+E A  V +E+    
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P   T+   I G+C+  +   +  L S +   G+R +    N ++ A  + G   D  
Sbjct: 271 FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA 330

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + +G ++A+D      DV T  IL++   K G K  A+   ++  +K +  + ++Y  LI
Sbjct: 331 ESIGWIIAND---CKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLI 387

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
             +C + +   A     QM +RG  PD++TY  L++ L   G +D+A +    L   GV+
Sbjct: 388 QAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVS 447

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD   Y  ++ GLC  G  + A+     ML+++++P+ +++  +IDG+ R GD   A  +
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
             L +  GV  +V   NA+I    R G + +A +    M  + + PD FTY+ +I     
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              +  A++++  M +    P+++TYT LI G C +G+ K AEE F ++Q   L  + + 
Sbjct: 568 QQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVT 627

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLRNK 572
           +  L +   +   + +    + + ++ NK
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYWELMMTNK 656



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 201/443 (45%), Gaps = 23/443 (5%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   +  +I  LC  GK   A+    +  +KG +P+ L++  L+   CK  + + A  
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++ +M+E    P+  TY   I G      +D A+++   + + G+ P+   +N+L+  LC
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K G    A     E+L   D     D      L+D + ++GD  +A  +++   +K ++ 
Sbjct: 462 KTGRFLPAKLLFSEML---DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D+V +N +I GFC +G +  A A   +M +   +PD  TY+T+++   KQ  +  A   +
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR- 413
             + K    P+ ++Y ++I G C  GD   A E    M  + +VP    +  +I    + 
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNAL-----------ILAETRG-----GSIFDAFS 457
              L  A    +LM++     N  TFN L           +LAE  G      S+F  F 
Sbjct: 639 SSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFF 698

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
            +  M  DG       YN  +   C  G +  A    D+M+++G +PD +++  ++ G C
Sbjct: 699 HR--MKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFC 756

Query: 518 ARGNMKEAEEV-FAKIQTLGLAI 539
             GN K+   + F  +   GL +
Sbjct: 757 VVGNSKQWRNMDFCNLGEKGLEV 779



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 164/401 (40%), Gaps = 41/401 (10%)

Query: 197 GYCRVNELDKALHLFSTMAN-NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            Y     L KA+ ++  +       P+ +  N L+  L K   LGDA K   E+    D 
Sbjct: 143 AYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGD- 201

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
             + D  ++ IL+      G       L    + K    +IV YN +I G+C  GDI +A
Sbjct: 202 --SVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQG------------------------------ 345
           +  F ++  +GF+P + T+ T++N  CK+G                              
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA 319

Query: 346 ------KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
                 K+D A    G +      PD  +Y  +I  LC  G    A  FL    +K ++P
Sbjct: 320 KYRHGYKVDPAESI-GWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIP 378

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +  +I  Y +  +   A  +   M   G   ++ T+  LI      G + DA ++K
Sbjct: 379 NNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMK 438

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            +++  G+ PD   YN+L+   C  G    A  L+ EML R I PD   Y  LI G    
Sbjct: 439 VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRS 498

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G+  EA +VF+     G+ +D +    + K + R    D+A
Sbjct: 499 GDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEA 539



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 140/304 (46%), Gaps = 20/304 (6%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   H A+I+  C  G +  AL    +M ++  VPD  T++ +++   K  D+  A 
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + R M + +  PN  TY + I G+C   +   A   F  M    + PN VT+  L+ +L
Sbjct: 576 KIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK----------NGDKFQALAL 283
            K+    +   +  E++  +  K   + +T   L+  + K          +G      +L
Sbjct: 636 AKESSTLEKAVYYWELMMTN--KCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSL 693

Query: 284 WNDMFQKNIQTD-----IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +++ F + +++D       AYN  +   C++G + +A  +  +M+K+GF PD +++  +L
Sbjct: 694 FSEFFHR-MKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752

Query: 339 NCLCKQGKLDEASHF-YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +  C  G   +  +  +  L + G+    + Y  +++       I +A   L +M+EK+ 
Sbjct: 753 HGFCVVGNSKQWRNMDFCNLGEKGLEV-AVRYSQVLEQHLPQPVICEASTILHAMVEKAD 811

Query: 398 VPEP 401
             EP
Sbjct: 812 TKEP 815


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 207/419 (49%), Gaps = 2/419 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  AL     M   G  PD +T+N L+N  C+ G L +A  ++  M +   +P  
Sbjct: 215 CSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTR 274

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN  ++ Y R+  + +A  +   M  NG  P+  T+N+L   LC+ G + +A +   E
Sbjct: 275 PTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDE 334

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +  +  G    DV+T   L D+ FK      AL L  +M +K ++  +V +N++I G C 
Sbjct: 335 M--ERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCK 392

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           +G++  A     +M   G  PDVITYNTL++  CK G + +A      + + G+  D  +
Sbjct: 393 DGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFT 452

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
             T++  LC      +A+  L S  ++  +P+   +  ++  Y +  +   A  + D M+
Sbjct: 453 LNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMI 512

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
              ++ ++ T+N LI   +R G + +A     E++  G+ PD  TYN++I A C  G + 
Sbjct: 513 EKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLE 572

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            A Q +++M+     PD++T   L+ G C  G + +A ++F      G  +D I +  L
Sbjct: 573 NAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTL 631



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 228/474 (48%), Gaps = 9/474 (1%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L + L  L TM+  G     L  D   +  ++   C  G +G A  L  +M + G  P  
Sbjct: 220 LADALSTLSTMQGFG-----LSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTR 274

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+N LV+   ++G +++A  V+  M+     P+  TYN    G C+  ++D+A  L   
Sbjct: 275 PTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDE 334

Query: 214 MANNG-IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
           M   G + P+ VT+N L  A  K     DA++ L E + +   KAT  ++T  I++    
Sbjct: 335 MERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEE-MREKGVKAT--LVTHNIVIKGLC 391

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K+G+   AL   N M    +  D++ YN LI+  C  G+I+ A+    +M++RG   D  
Sbjct: 392 KDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTF 451

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           T NT+L  LCK+ + +EA        + G  PD++SY T++       +   A      M
Sbjct: 452 TLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEM 511

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +EK + P    +N +I G  R G L  A    + ++  G+  +  T+N +I A  + G +
Sbjct: 512 IEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDL 571

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +AF    +M+ +   PDV T N L+   C  G +  AL+L++  + +G   D+ITY  L
Sbjct: 572 ENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTL 631

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           I+  C  G++  A   FA ++  GL  D   + ++         +++A+++  K
Sbjct: 632 IQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHK 685



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 221/480 (46%), Gaps = 37/480 (7%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKAD 173
           E D   +  +   LC  GK+  A  L+ +M + GT+ PDV+T+N L +   K      A 
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDAL 365

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM E        T+N  I G C+  EL+ AL   + MA++G+ P+ +T+N L+HA 
Sbjct: 366 RLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAH 425

Query: 234 CKKGLLGDAVKFLGEVL------------------------ADDDGKATS--------DV 261
           CK G +  A   + E++                         +  G   S        D 
Sbjct: 426 CKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDE 485

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           ++   +M +YFK  +   AL LW++M +K +   I  YN LI G    G +  A     +
Sbjct: 486 VSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNE 545

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           ++++G +PD  TYN +++  CK+G L+ A  F+  + +    PD ++  T++ GLC++G 
Sbjct: 546 LMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGK 605

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + KA +   S +EK    +   +N +I    + GD+  A      M + G+  + FT+N 
Sbjct: 606 LDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNV 665

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           ++ A +  G   +A ++  ++   G     F+  LL  +S +        +  +E +   
Sbjct: 666 VLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENP 725

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK----KRYRRMKES 557
                  YT+L+ G C  G  KEA+ +  ++   G+++D   +  L     KR +R+  +
Sbjct: 726 QDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQKRLTHA 785



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 199/419 (47%), Gaps = 8/419 (1%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+ MR+ G V+ TL T    H  VI+ LC  G++  AL    KM   G  PDV+T+N L+
Sbjct: 368 LEEMREKG-VKATLVT----HNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLI 422

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           +  CK G++ KA  ++ EM       +  T N  +   C+    ++A  L  +    G  
Sbjct: 423 HAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFM 482

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P+ V++  ++ A  K+     A++   E++   + K T  + T   L+    + G   +A
Sbjct: 483 PDEVSYGTVMAAYFKEYNSEPALRLWDEMI---EKKLTPSISTYNTLIKGLSRMGRLKEA 539

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           +   N++ +K +  D   YN++I+ +C  GD+ +AF +  +M++  F PDV+T NTL+N 
Sbjct: 540 IDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNG 599

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           LC  GKLD+A   +    + G   D I+Y T+IQ +C  GD+  A  F   M  + + P+
Sbjct: 600 LCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPD 659

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +NV++      G    A ++   +   G  S  F+   L  +             ++
Sbjct: 660 AFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEE 719

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           E + +        Y  L+   C  G    A  + DEM+++G++ D  TY  L++G   R
Sbjct: 720 ETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKR 778



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 192/395 (48%), Gaps = 4/395 (1%)

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
             R +  +R  PN  T+N  +  +C    L  AL   STM   G+ P+ VT+N L++A C
Sbjct: 191 AFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHC 250

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           +KG+LG+A   L  +    DG A +    +T L+ +Y + G   QA  +   M     + 
Sbjct: 251 RKGMLGEARALLARM--KKDGVAPTRPTYNT-LVSAYARLGWIKQATKVVEAMTANGFEP 307

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRG-FLPDVITYNTLLNCLCKQGKLDEASHF 353
           D+  YNVL  G C  G +  AF    +M + G  LPDV+TYNTL +   K     +A   
Sbjct: 308 DLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRL 367

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + + GV    +++  +I+GLC  G++  A   L  M +  + P+   +N +I  + +
Sbjct: 368 LEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCK 427

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G+++ A+++ D M+  G+  + FT N ++    +     +A  L +     G  PD  +
Sbjct: 428 AGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVS 487

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  ++ A     +   AL+L+DEM+ + +TP I TY  LIKG    G +KEA +   ++ 
Sbjct: 488 YGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELM 547

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             GL  D   + I+   Y +  + + A   H K +
Sbjct: 548 EKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMV 582



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 116/253 (45%), Gaps = 8/253 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           LKE +D+L  + + G     L  D   +  +I   C  G +  A     KM++    PDV
Sbjct: 536 LKEAIDKLNELMEKG-----LVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDV 590

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T N L+N LC  G L+KA  +     E     +  TYN  I   C+  ++D ALH F+ 
Sbjct: 591 VTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFAD 650

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G++P+  T+N+++ AL + G   +A   L ++    +    S   +S +L  S   
Sbjct: 651 MEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLA---ESGTLSQSFSSPLLKPSSVD 707

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
             +  +      +  +    +   AY  L+NG C +G    A A   +M+++G   D  T
Sbjct: 708 EAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSST 767

Query: 334 YNTLLNCLCKQGK 346
           Y TL+  L K+ K
Sbjct: 768 YITLMEGLVKRQK 780



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLK--KEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
           V  ++   NA++ A  R  S     SL   + ++   + P+ +T+NLL+   C+ G +  
Sbjct: 163 VRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLAD 222

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           AL     M   G++PD +TY  L+  HC +G + EA  + A+++  G+A     +  L  
Sbjct: 223 ALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVS 282

Query: 550 RYRRM 554
            Y R+
Sbjct: 283 AYARL 287


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 207/432 (47%), Gaps = 6/432 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ LC   ++ TA+ +  +M  +G  PD  T   L+    + G +E A  V   M EM 
Sbjct: 187 LMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            S    T N  I GYC++  ++ AL        +G  P+++T+N  V+ LC+   +G A+
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K +  ++ +       DV T  I+++   KNG   +A  + N M  +    DI  +N LI
Sbjct: 307 KVMDVMVQEGH---DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
              C    +  A     Q+  +G  PDV T+N L+N LCK G    A   +  +  +G  
Sbjct: 364 AALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 423

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI-WNVIIDGYGRCGDLSNAFS 422
           PD+++Y T+I  LC  G + KA + L  M E +  P   I +N IIDG  +   +  A  
Sbjct: 424 PDEVTYNTLIDNLCSLGKLGKALDLLKDM-ESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M   G+S N  TFN LI    +   I DAF L  +M+ +G+ P+  TYN ++   C
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYC 542

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G I  A  + + M   G   D++TY  LI G C  G  + A +V   ++  G+     
Sbjct: 543 KQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPK 602

Query: 543 PFR-ILKKRYRR 553
            +  +L+  +RR
Sbjct: 603 AYNPVLQSLFRR 614



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 204/416 (49%), Gaps = 3/416 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I  AL ++ +M++ G     +T N L+N  CK+G +E A   I++       P+  TY
Sbjct: 230 GSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITY 289

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N F+ G C+ + +  AL +   M   G  P+  T+NI+V+ LCK G L +A   L +++ 
Sbjct: 290 NTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV- 348

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             D     D+ T   L+ +        +AL L   +  K +  D+  +N+LIN  C  GD
Sbjct: 349 --DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 406

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A   F +M   G  PD +TYNTL++ LC  GKL +A      +  TG     I+Y T
Sbjct: 407 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 466

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           II GLC    I +A E    M  + +      +N +IDG  +   + +AF + + M+S G
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N  T+N+++    + G I  A  + + M  +G   DV TY  LI   C  G   +AL
Sbjct: 527 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++   M  +G+ P    Y  +++    R N+++A  +F ++  +G   D + ++I+
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIV 642



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 202/420 (48%), Gaps = 3/420 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           L  G K+     +  +M  +G  PDV+T N L+  LC+   +  A  ++ EMS    +P+
Sbjct: 156 LVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPD 215

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             T+   + G+     ++ AL + + M   G    +VT N+L++  CK G + DA+ ++ 
Sbjct: 216 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 275

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           + +AD       D IT    ++   +N     AL + + M Q+    D+  YN+++N  C
Sbjct: 276 QEIADG---FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 332

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            NG +  A     QM+ RG LPD+ T+NTL+  LC   +L+EA      ++  GV+PD  
Sbjct: 333 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 392

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           ++  +I  LC  GD   A      M      P+   +N +ID     G L  A  +   M
Sbjct: 393 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 452

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
            S G   +  T+N +I    +   I +A  +  +M L GI  +  T+N LI   C    I
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A +L ++M+  G+ P+ ITY  ++  +C +G++K+A ++   +   G  +D + +  L
Sbjct: 513 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 572



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 193/403 (47%), Gaps = 4/403 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            E D   +   +  LC    +G AL +   M+Q+G  PDV T+N +VN LCK G LE+A 
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M +    P+  T+N  I   C  N L++AL L   +   G+ P+  T NIL++AL
Sbjct: 342 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINAL 401

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G    A++   E+    +   T D +T   L+D+    G   +AL L  DM      
Sbjct: 402 CKVGDPHLALRLFEEM---KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCP 458

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
              + YN +I+G C    I  A   F QM  +G   + IT+NTL++ LCK  K+D+A   
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 518

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+ P+ I+Y +I+   C  GDI KA + L +M       +   +  +I+G  +
Sbjct: 519 INQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCK 578

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G    A  +   M   G+      +N ++ +  R  +I DA SL +EM   G  PD  T
Sbjct: 579 AGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALT 638

Query: 474 YNLLIGASC-NLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           Y ++    C   G I  A     EM+ +G  P+  ++  L +G
Sbjct: 639 YKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEG 681



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 181/363 (49%), Gaps = 4/363 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC  G++  A  +  +M+ +G +PD+ T N L+  LC    LE+A  + R+++   
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP+  T+N  I   C+V +   AL LF  M N+G  P+ VT+N L+  LC  G LG A+
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++ +    ++T   IT   ++D   K     +A  +++ M  + I  + + +N LI
Sbjct: 447 DLLKDMESTGCPRST---ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C +  I  AF    QM+  G  P+ ITYN++L   CKQG + +A+     ++  G  
Sbjct: 504 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D ++Y T+I GLC  G    A + L  M  K + P P  +N ++    R  ++ +A S+
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 623

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGS-IFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
              M   G   +  T+  +     RGG  I +AF    EM+  G  P+  ++ +L     
Sbjct: 624 FREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683

Query: 483 NLG 485
           NLG
Sbjct: 684 NLG 686



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 203/427 (47%), Gaps = 4/427 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G++  AL   ++ I  G  PD +T+N  VN LC+   +  A  V+  M +  
Sbjct: 257 LINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYN  +   C+  +L++A  + + M + G  P+  T N L+ ALC    L +A+
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               +V        + DV T  IL+++  K GD   AL L+ +M       D V YN LI
Sbjct: 377 DLARQVTVKG---VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G +  A      M   G     ITYNT+++ LCK+ +++EA   +  +   G++
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            + I++ T+I GLC    I  A E +  M+ + + P    +N I+  Y + GD+  A  I
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M + G   +V T+  LI    + G    A  + + M + G+ P    YN ++ +   
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHC-ARGNMKEAEEVFAKIQTLGLAIDHI 542
             +I  AL L+ EM   G  PD +TY  + +G C   G +KEA +   ++   G   +  
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673

Query: 543 PFRILKK 549
            FR+L +
Sbjct: 674 SFRMLAE 680



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 198/416 (47%), Gaps = 3/416 (0%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G   D + +N+L+N L +   ++  + V  EM      P+  T+N  +   CR +++  A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + +   M++ G+ P+  T   L+    ++G +  A++    +L   +   ++  +T  +L
Sbjct: 201 VIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML---EMGCSATKVTVNVL 257

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           ++ Y K G    AL           + D + YN  +NG C N  +  A      M++ G 
Sbjct: 258 INGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PDV TYN ++NCLCK G+L+EA      +   G  PD  ++ T+I  LC    + +A +
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               +  K V P+ + +N++I+   + GD   A  + + M + G + +  T+N LI    
Sbjct: 378 LARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G +  A  L K+M   G      TYN +I   C    I  A +++D+M  +GI+ + I
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 497

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           T+  LI G C    + +A E+  ++ + GL  ++I +  +   Y +  +  KA DI
Sbjct: 498 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 190/389 (48%), Gaps = 7/389 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P    +  ++ +L  +G L+    ++ EM            ++F+  Y      D A+ L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 211 FSTMANN--GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTIL 267
                    GI+ + V +N L++ L +    G  +K L  V ++   +    DV+T   L
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVE----GSKMKLLESVYSEMGARGIKPDVVTFNTL 187

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           M +  +      A+ +  +M  + +  D   +  L+ GF   G I +A     +ML+ G 
Sbjct: 188 MKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGC 247

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
               +T N L+N  CK G++++A  +       G  PDQI+Y T + GLC +  +  A +
Sbjct: 248 SATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALK 307

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            +  M+++   P+   +N++++   + G L  A  I + M+  G   ++ TFN LI A  
Sbjct: 308 VMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALC 367

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
            G  + +A  L +++ + G+ PDV+T+N+LI A C +G  HLAL+L++EM   G TPD +
Sbjct: 368 TGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEV 427

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           TY  LI   C+ G + +A ++   +++ G
Sbjct: 428 TYNTLIDNLCSLGKLGKALDLLKDMESTG 456



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 6/346 (1%)

Query: 205 DKALHLF-STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           D AL +  + +A +   P    +  ++  L   G L D +K L   +  +  +    V+ 
Sbjct: 55  DAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGAL-DLMKVLVAEMRREGHQVKLGVVH 113

Query: 264 STILMDSYFKNGDKFQALALWNDMFQK--NIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           S   +DSY        A+ L  +  Q    IQ D V YN L+N       +    + + +
Sbjct: 114 S--FLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSE 171

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M  RG  PDV+T+NTL+  LC+  ++  A      +S  GVAPD+ ++ T++QG    G 
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           I  A      MLE          NV+I+GY + G + +A       ++ G   +  T+N 
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
            +    +   +  A  +   M+ +G  PDVFTYN+++   C  G +  A  + ++M+ RG
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             PDI T+  LI   C    ++EA ++  ++   G++ D   F IL
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNIL 397



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 122/256 (47%), Gaps = 9/256 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L + LD LK M  TG  R T+  +      +I  LC   +I  A  +  +M  +G   + 
Sbjct: 442 LGKALDLLKDMESTGCPRSTITYN-----TIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T N L++ LCK   ++ A  +I +M      PN  TYN+ +T YC+  ++ KA  +  T
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  NG   + VT+  L++ LCK G    A+K L  +     G   +    + +L  S F+
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK--GMRPTPKAYNPVL-QSLFR 613

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG-DISSAFAYFCQMLKRGFLPDVI 332
             +   AL+L+ +M +     D + Y ++  G C  G  I  AF +  +M+ +GF+P+  
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673

Query: 333 TYNTLLNCLCKQGKLD 348
           ++  L   L   G  D
Sbjct: 674 SFRMLAEGLLNLGMDD 689



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 3/227 (1%)

Query: 337 LLNCLCKQGKLDEASHFY-GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           LL  L +Q   D A       L++   AP    Y+ II+ L   G +   +  +  M  +
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSI--RDLMLSFGVSSNVFTFNALILAETRGGSIF 453
               +  + +  +D Y       +A  +    L   FG+ ++   +N L+     G  + 
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
              S+  EM   GI PDV T+N L+ A C    +  A+ + +EM  RG+ PD  T+T L+
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLM 223

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           +G    G+++ A  V A++  +G +   +   +L   Y ++   + A
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 270


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 219/437 (50%), Gaps = 3/437 (0%)

Query: 130 LGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCA 189
           L   + +A  +   M +KG   + +++  L++ LC++G +++  ++ ++M E    P   
Sbjct: 16  LNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVR 75

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           TY   +          +A++LFS M   G  PN  T+ ++++A+CK+  L +  + L E+
Sbjct: 76  TYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEM 135

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +  + G   S V T   L+D Y K G    A  + + M   +   +   YN LI GFC  
Sbjct: 136 V--EKGLVPS-VPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRK 192

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
            ++  A A   +ML+    P V+TYN+L++  CK G LD A     ++++ GV PDQ +Y
Sbjct: 193 KNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTY 252

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
              I  LC  G I +A     S+ EK +     I+  +IDGY + G + +A S+ D ML+
Sbjct: 253 SVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLT 312

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
                N  T+NALI    +   + +A  L + M+  G+   V TY +LI A    G    
Sbjct: 313 EDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDY 372

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A ++ D+M+  G  PD+  YT  I   C RGN+KEAE++ + +   G+  D + + ++  
Sbjct: 373 AHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVID 432

Query: 550 RYRRMKESDKARDIHQK 566
            Y  +   + A D+ ++
Sbjct: 433 AYGGLGLLNPAFDVLKR 449



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 228/486 (46%), Gaps = 65/486 (13%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E ++    MR+ G      E +   +  +I  +C   K+     +  +M++KG VP V T
Sbjct: 92  EAINLFSEMRERG-----CEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPT 146

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +N L++  CK G +E A  ++  M     +PN  TYN  I G+CR   + +A+ L S M 
Sbjct: 147 YNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKML 206

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
            + + P+ VT+N L+H  CK G L  A + L   L +++G    D  T ++ +D+  K G
Sbjct: 207 ESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLN--LMNENG-VVPDQWTYSVFIDTLCKKG 263

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
              +A  L+N + +K I+ + V Y  LI+G+C  G +  A +   +ML    LP+  TYN
Sbjct: 264 RIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYN 323

Query: 336 TLLNCLCKQGKLDEA--------------------------------SHFYGVLSK---T 360
            L++ LCK+ K+ EA                                 + + +L +   +
Sbjct: 324 ALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSS 383

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  PD   Y   I   C  G+I +A + +  M E+ V+P+   + ++ID YG  G L+ A
Sbjct: 384 GYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPA 443

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM--------LLDGIFPDVF 472
           F +   M   G   +  T++ LI              LK+E+        L D I P+VF
Sbjct: 444 FDVLKRMFDTGCDPSHHTYSCLI-----------KHLLKEELTKKYKNVALCDSI-PNVF 491

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
             +  +     +     AL+L+++ML  G +P+I TY +LI G C  G +  A+++F  +
Sbjct: 492 FAD--VADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHM 549

Query: 533 QTLGLA 538
              G++
Sbjct: 550 NERGVS 555



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 214/443 (48%), Gaps = 3/443 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  G++   + + +KM +    P V T+  +V+ L + G   +A ++  EM 
Sbjct: 42  YTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMR 101

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TY   I   C+  +L++   +   M   G+ P+  T+N L+   CK+G++ 
Sbjct: 102 ERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVE 161

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A + L  + ++       +  T   L+  + +  +  +A+AL + M +  +   +V YN
Sbjct: 162 AAQEILDLMHSNS---CNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYN 218

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G C  G + SA+     M + G +PD  TY+  ++ LCK+G+++EA+  +  L + 
Sbjct: 219 SLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEK 278

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+  +++ Y  +I G C  G +  A   L  ML +  +P    +N +IDG  +   +  A
Sbjct: 279 GIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEA 338

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + M+  G+   V T+  LI+A  + G    A  +  +M+  G  PDV+ Y   I A
Sbjct: 339 LLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHA 398

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  G+I  A  +   M  RG+ PD +TYT +I  +   G +  A +V  ++   G    
Sbjct: 399 FCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPS 458

Query: 541 HIPFRILKKRYRRMKESDKARDI 563
           H  +  L K   + + + K +++
Sbjct: 459 HHTYSCLIKHLLKEELTKKYKNV 481



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 199/458 (43%), Gaps = 32/458 (6%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R +  +I   C    +  A+ L  KM++    P V+T+N L++  CKIG L+ A  ++  
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M+E    P+  TY+ FI   C+   +++A  LF+++   GI+ N V +  L+   CK G 
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           + DA   L  +L +D    +S   T   L+D   K     +AL L   M QK ++  +  
Sbjct: 300 MDDANSLLDRMLTEDCLPNSS---TYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPT 356

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y +LI      GD   A     QM+  G+ PDV  Y   ++  C +G + EA     ++ 
Sbjct: 357 YTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMF 416

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID--------- 409
           + GV PD ++Y  +I      G +  A + L  M +    P  H ++ +I          
Sbjct: 417 ERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTK 476

Query: 410 ---GYGRCGDLSNAF-----------------SIRDLMLSFGVSSNVFTFNALILAETRG 449
                  C  + N F                  + + ML  G S N+ T+  LI+   + 
Sbjct: 477 KYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKV 536

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G +  A  L   M   G+ P    YN L+   C LG    A++L   M+  G  P + + 
Sbjct: 537 GRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESL 596

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             L  G    G+ ++A+ VF+ +   G   D + ++IL
Sbjct: 597 NVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKIL 634



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 146/295 (49%)

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           N D   A +++N M +K  + + V+Y  LI+G C  G +      F +M +    P V T
Sbjct: 17  NNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRT 76

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y  +++ L + G+  EA + +  + + G  P+  +Y  +I  +C    + + R  L  M+
Sbjct: 77  YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           EK +VP    +N +IDGY + G +  A  I DLM S   + N  T+N LI    R  ++ 
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVH 196

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A +L  +ML   + P V TYN LI   C +G++  A +L + M   G+ PD  TY+  I
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFI 256

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
              C +G ++EA  +F  ++  G+  + + +  L   Y +  + D A  +  + L
Sbjct: 257 DTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRML 311



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 187/454 (41%), Gaps = 32/454 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G + +A  L   M + G VPD  T++  ++ LCK G +E+A+ +   + E 
Sbjct: 219 SLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEK 278

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N   Y A I GYC+  ++D A  L   M      PN  T+N L+  LCK+  + +A
Sbjct: 279 GIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEA 338

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  L E +     K T  V T TIL+ +  K GD   A  + + M     Q D+  Y   
Sbjct: 339 L-LLMESMIQKGLKCT--VPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAF 395

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+ FC  G+I  A      M +RG +PD +TY  +++     G L+ A      +  TG 
Sbjct: 396 IHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGC 455

Query: 363 APDQISYKTIIQ--------------GLC------IHGDIV---------KAREFLLSML 393
            P   +Y  +I+               LC         D+           A E    ML
Sbjct: 456 DPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKML 515

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           E    P  + +  +I G  + G L  A  + D M   GVS +   +N+L+      G   
Sbjct: 516 EHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYG 575

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           DA  L   M+  G  P + + N+L       G    A  ++  +L+ G   D + +  LI
Sbjct: 576 DAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILI 635

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G    G      E+   ++  G  I    +R+L
Sbjct: 636 DGLLKNGLSDGCSELLGVMEARGCQIHPQTYRML 669



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 145/347 (41%), Gaps = 26/347 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC   K+  AL L   MIQKG    V T+  L+  + K GD + A  ++ +M   
Sbjct: 324 ALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSS 383

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   Y AFI  +C    + +A  + S M   G+ P+ +T+ +++ A    GLL  A
Sbjct: 384 GYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPA 443

Query: 243 VKFLG-------------------EVLADDDGKATSDVITSTILMDSYFKNGD------K 277
              L                     +L ++  K   +V     + + +F +        K
Sbjct: 444 FDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMK 503

Query: 278 FQ-ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
           F+ AL L+  M +     +I  Y  LI G C  G +  A   F  M +RG  P    YN+
Sbjct: 504 FETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNS 563

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           LLNC C+ G   +A    G + + G  P   S   +  GL   G   KA+    ++L+  
Sbjct: 564 LLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCG 623

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
              +   W ++IDG  + G       +  +M + G   +  T+  LI
Sbjct: 624 YNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLI 670



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 121/291 (41%), Gaps = 32/291 (10%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   + A I   C  G I  A  +   M ++G +PD LT+  +++    +G L  A  
Sbjct: 386 QPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFD 445

Query: 175 VIREMSEMRPSPNCATYNAFI--------------TGYC---------------RVNELD 205
           V++ M +    P+  TY+  I                 C               ++ + +
Sbjct: 446 VLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFE 505

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
            AL LF  M  +G  PN  T+  L+  LCK G LG A K    +  ++ G + S+ I ++
Sbjct: 506 TALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHM--NERGVSPSEAIYNS 563

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            L++   + G    A+ L   M +      + + NVL  G    G    A   F  +L+ 
Sbjct: 564 -LLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQC 622

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           G+  D + +  L++ L K G  D  S   GV+   G      +Y+ +I+GL
Sbjct: 623 GYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 233/483 (48%), Gaps = 37/483 (7%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM-- 179
            ++++  C  G + +AL L  K+ + G  P+ +T++ L+   C  G++EKA  +  +M  
Sbjct: 369 TSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKL 428

Query: 180 SEMRPS--------------------------------PNCATYNAFITGYCRVNELDKA 207
           + + PS                                 N  TYN  ++  C+  ++D+A
Sbjct: 429 NGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEA 488

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M N G+ PN V++N ++   C+KG +  A     ++LA D      +V+T +IL
Sbjct: 489 CSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD---LKPNVVTYSIL 545

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D  FK GD  +AL L++ M   NI      +N +ING C  G +S A       L+ GF
Sbjct: 546 IDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGF 605

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +P  +TYN++++   K+G +D A   Y  + + GV+P+ ++Y ++I G C    I  A +
Sbjct: 606 IPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALK 665

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M EK +  +   ++ +IDG+ +  D+ +A  +   +L  G+S N   +N++I    
Sbjct: 666 TRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFR 725

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
              ++  A    K+M+ D I  D+ TY  LI      G +  A  LY EML +GI PDII
Sbjct: 726 DLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDII 785

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           T+  L+ G C +G ++ A ++  ++    +    + +  L   Y R     +A  +H + 
Sbjct: 786 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 845

Query: 568 LLR 570
           L R
Sbjct: 846 LDR 848



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 218/437 (49%), Gaps = 13/437 (2%)

Query: 98  LDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           L+ L+ M++ G  P   T         +VI      G +  AL L+ +MI  G   +++ 
Sbjct: 315 LELLEEMKERGWVPSEATF-------TSVIVACVAQGNMVEALRLKEEMINCGKPMNLVV 367

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
              L+   C  G+L+ A ++  +++E    PN  TY+  I G C    ++KA  L++ M 
Sbjct: 368 ATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMK 427

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
            NGI P+    N L+    K  L  +A K   E  A D G A  ++ T  I+M    K G
Sbjct: 428 LNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE--AVDCGVA--NIFTYNIMMSWLCKGG 483

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
              +A +L ++M  + +  ++V+YN +I G C  G++  A + F  ML R   P+V+TY+
Sbjct: 484 KMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYS 543

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            L++   K+G  ++A   +  +    +AP   ++ TII GLC  G + +AR+ L + LE+
Sbjct: 544 ILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEE 603

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
             +P    +N I+DG+ + G++ +A ++   M  FGVS NV T+ +LI    +   I  A
Sbjct: 604 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 663

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
              + EM   G+  DV  Y+ LI   C    +  A  L+ E+L  G++P+ I Y  +I G
Sbjct: 664 LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG 723

Query: 516 HCARGNMKEAEEVFAKI 532
                NM+ A   + K+
Sbjct: 724 FRDLNNMEAALVWYKKM 740



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 219/438 (50%), Gaps = 7/438 (1%)

Query: 81  GNPQAVFNALDLI---LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTA 137
           G P +VFN   L+   LK  L    +      V C +   +  ++ ++  LC GGK+  A
Sbjct: 430 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNI-MMSWLCKGGKMDEA 488

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
             L   M+ +G VP+V+++N ++   C+ G+++ A  V  +M      PN  TY+  I G
Sbjct: 489 CSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDG 548

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
             +  + +KAL LF  M +  I P   T N +++ LCK G + +A   L   L  ++G  
Sbjct: 549 NFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFL--EEGFI 606

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
            S  +T   ++D + K G+   ALA++ +M +  +  ++V Y  LINGFC +  I  A  
Sbjct: 607 PS-CMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALK 665

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
              +M ++G   DV  Y+ L++  CK+  ++ A   +  L + G++P++I Y ++I G  
Sbjct: 666 TRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFR 725

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
              ++  A  +   M+   +  +   +  +IDG  + G L  A  +   MLS G+  ++ 
Sbjct: 726 DLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDII 785

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           TF+ L+      G + +A  + +EM    + P V  YN LI      G++  A  L+DEM
Sbjct: 786 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 845

Query: 498 LRRGITPDIITYTELIKG 515
           L RG+ PD +TY  LI G
Sbjct: 846 LDRGLVPDDVTYDILING 863



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 220/455 (48%), Gaps = 4/455 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I+ +C        L L  +M ++G VP   T   ++      G++ +A 
Sbjct: 291 VKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEAL 350

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM       N     + + GYC    LD AL+LF+ +  +G+ PN+VT+++L+   
Sbjct: 351 RLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGC 410

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C  G +  A +   ++  +        V     L+  Y K     +A  L+++     + 
Sbjct: 411 CNSGNIEKASELYTQMKLNG---IPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV- 466

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +I  YN++++  C  G +  A +    M+ +G +P+V++YN ++   C++G +D AS  
Sbjct: 467 ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSV 526

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  +    + P+ ++Y  +I G    GD  KA +    ML  ++ P    +N II+G  +
Sbjct: 527 FSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCK 586

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G +S A       L  G   +  T+N+++    + G+I  A ++ +EM   G+ P+V T
Sbjct: 587 VGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVT 646

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  LI   C    I LAL+  DEM  +G+  D+  Y+ LI G C R +M+ A+++F ++ 
Sbjct: 647 YTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELL 706

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            +GL+ + I +  +   +R +   + A   ++K +
Sbjct: 707 EVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI 741



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/414 (22%), Positives = 196/414 (47%), Gaps = 39/414 (9%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            +N  +  Y R N ++ A+  F+ M    + P     NIL+ AL ++ ++G+      ++
Sbjct: 192 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 251

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +         D  T  +++ +  K G   +A   + +  ++ ++ D  AY+++I   C  
Sbjct: 252 VLRG---IYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 308

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNT--------------------LLNC--------- 340
            + +       +M +RG++P   T+ +                    ++NC         
Sbjct: 309 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 368

Query: 341 ------LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
                  C QG LD A + +  +++ G+ P++++Y  +I+G C  G+I KA E    M  
Sbjct: 369 TSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKL 428

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             + P     N ++ GY +      A  + D  +  GV +N+FT+N ++    +GG + +
Sbjct: 429 NGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDE 487

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A SL   M+  G+ P+V +YN +I   C  G++ +A  ++ +ML R + P+++TY+ LI 
Sbjct: 488 ACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILID 547

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+  +G+ ++A ++F ++ +L +A     F  +     ++ +  +ARD  + +L
Sbjct: 548 GNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFL 601



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/351 (21%), Positives = 134/351 (38%), Gaps = 55/351 (15%)

Query: 199 CRVNELDKALHLFS-TMANNGIRPNRVTHNILVHALCKKGLL-GDAVKFLGEVLADDDGK 256
           C VN+   AL  F       G       + +L+H L +     G A K L   ++ D   
Sbjct: 109 CHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSDP 168

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
                 +  + +D       +F            + + D   +N L+N +     I +A 
Sbjct: 169 ------SPVVFVDHLINCAKRF------------DFELDHRVFNYLLNAYIRANRIENAI 210

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F  M+ +  +P V   N LL  L ++  + E    Y  +   G+  D  +   +++  
Sbjct: 211 DCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRAC 270

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
              G + +A E+     E+ V  +   +++II    +                   +SN+
Sbjct: 271 LKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCK-----------------KPNSNL 313

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
                                L +EM   G  P   T+  +I A    G++  AL+L +E
Sbjct: 314 ------------------GLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEE 355

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           M+  G   +++  T L+KG+CA+GN+  A  +F KI   GL  + + + +L
Sbjct: 356 MINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVL 406



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 123/301 (40%), Gaps = 23/301 (7%)

Query: 289 QKNIQTDIVAYNVLINGF-CLNGDISSAFAYFCQM-LKRGFLPDVITYNTLLNCLCKQ-- 344
           Q + +T  ++ N +I+   C   D  SA  YF +   +RGF+  V  Y  LL+ L +   
Sbjct: 90  QIHQETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPE 149

Query: 345 --------------GKLDEAS-----HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
                         G  D +      H      +     D   +  ++        I  A
Sbjct: 150 THGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENA 209

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            +   +M+ + V+P     N+++    R   +     + + M+  G+  + FT + ++ A
Sbjct: 210 IDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRA 269

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G + +A    +E    G+  D   Y+++I A C   + +L L+L +EM  RG  P 
Sbjct: 270 CLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPS 329

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
             T+T +I    A+GNM EA  +  ++   G  ++ +    L K Y      D A ++  
Sbjct: 330 EATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFN 389

Query: 566 K 566
           K
Sbjct: 390 K 390


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 220/449 (48%), Gaps = 6/449 (1%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D L+ M + G V C+   D   +  VI      G +  A  L ++M+Q+G  PD++T++ 
Sbjct: 205 DLLRMMAEGGTV-CS--PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSS 261

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           +V+ LCK   ++KA+  +R+M      P+  TYN  I GY    +  +A+ +F  M    
Sbjct: 262 VVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 321

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           I P+ V  N L+ +LCK G + +A      +          DV + TI+++ Y   G   
Sbjct: 322 ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQ---NPDVFSYTIMLNGYATKGCLV 378

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
               L++ M    I   I  +NVLI  +   G +  A   F +M   G  P V+TY T++
Sbjct: 379 DMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVI 438

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             LC+ GK+D+A   +  +   GV PD+ +Y  +IQG C HG ++KA+E +  ++   + 
Sbjct: 439 AALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMR 498

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
            +   +  II+   + G + +A +I DL ++ G+  +   +N L+      G +  A  +
Sbjct: 499 LDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRV 558

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
              M+  GI P+V  Y  L+   C +G I   L L+ EML++GI P  I Y  +I G   
Sbjct: 559 FDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 618

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G    A+  F ++   G+A++   + I+
Sbjct: 619 AGRTVPAKVKFHEMTESGIAMNKCTYSIV 647



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 224/476 (47%), Gaps = 41/476 (8%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           +R  L  D      +++  C   +   AL  L  +  + G VPDV ++N L+  LC  G 
Sbjct: 140 LRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGK 199

Query: 169 LEKADHVIREMSEMRP--SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
             +AD ++R M+E     SP+   YN  I G+ +  +++KA  LF  M   GI P+ VT+
Sbjct: 200 SGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY 259

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           + +VHALCK   +  A  FL +++   +     D  T   L+  Y   G   +A+ ++ +
Sbjct: 260 SSVVHALCKARAMDKAEAFLRQMV---NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKE 316

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN------C 340
           M +++I  D+VA N L+   C  G I  A   F  M  +G  PDV +Y  +LN      C
Sbjct: 317 MRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGC 376

Query: 341 LCKQ-----------------------------GKLDEASHFYGVLSKTGVAPDQISYKT 371
           L                                G LD+A   +  +   GV P  ++Y T
Sbjct: 377 LVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMT 436

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I  LC  G +  A E    M+++ VVP+ + ++ +I G+   G L  A  +   +++ G
Sbjct: 437 VIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  ++  F ++I    + G + DA ++    +  G+ PD   YN+L+   C +G +  AL
Sbjct: 497 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 556

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +++D M+  GI P+++ Y  L+ G+C  G + E   +F ++   G+    I + I+
Sbjct: 557 RVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 612



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 183/406 (45%), Gaps = 7/406 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G  P + T N L+      G L+KA  +  EM +    P+  TY   I   CR+ +
Sbjct: 387 MLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A+  F+ M + G+ P++  ++ L+   C  G L  A + + E++   +     D++ 
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIM---NNGMRLDIVF 503

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              ++++  K G    A  +++      +  D V YN+L++G+CL G +  A   F  M+
Sbjct: 504 FGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 563

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  P+V+ Y TL+N  CK G++DE    +  + + G+ P  I Y  II GL   G  V
Sbjct: 564 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 623

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGY--GRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
            A+     M E  +      +++++ G    RC D    F  ++L  +  V  ++ T N 
Sbjct: 624 PAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD-EAIFLFKELR-AMNVKIDIITLNT 681

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I    +   + +A  L   +   G+ P   TY+++I      G +  A  ++  M   G
Sbjct: 682 MIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 741

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             PD      +++    +  +  A    +KI     +++H+   +L
Sbjct: 742 CEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLL 787



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 141/293 (48%), Gaps = 3/293 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I +LC  G++  A  +    +  G  PD + +N L++  C +G +EKA  V   M   
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   Y   + GYC++  +D+ L LF  M   GI+P+ + +NI++  L + G    A
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+   + G A +   T +I++   FKN    +A+ L+ ++   N++ DI+  N +
Sbjct: 626 KVKFHEM--TESGIAMNKC-TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTM 682

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G      +  A   F  + + G +P  +TY+ ++  L K+G ++EA   +  +   G 
Sbjct: 683 IAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 742

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            PD      +++ L    +IV+A  +L  + E++   E     +++D +   G
Sbjct: 743 EPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 795



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 42/263 (15%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT---GVAPDQISYKT 371
           A A+F Q+L+ G   D I  + LL   C+  + DEA     +L +T   G  PD  SY  
Sbjct: 132 ALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI--LLHRTPELGCVPDVFSYNI 189

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLS 429
           +++ LC  G   +A + L  M E   V  P +  +N +IDG+ + GD++           
Sbjct: 190 LLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNK---------- 239

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
                                    A  L KEM+  GI PD+ TY+ ++ A C    +  
Sbjct: 240 -------------------------ACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDK 274

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A     +M+ +G+ PD  TY  LI G+ + G  KEA  VF +++   +  D +    L  
Sbjct: 275 AEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMG 334

Query: 550 RYRRMKESDKARDIHQKWLLRNK 572
              +  +  +ARD+     ++ +
Sbjct: 335 SLCKYGKIKEARDVFDTMAMKGQ 357



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/244 (20%), Positives = 104/244 (42%), Gaps = 3/244 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   +E +   +  ++   C  G+I   L L R+M+QKG  P  + +N +++ L + G  
Sbjct: 563 VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRT 622

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A     EM+E   + N  TY+  + G  +    D+A+ LF  +    ++ + +T N +
Sbjct: 623 VPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTM 682

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  + +   + +A      +            +T +I++ +  K G   +A  +++ M  
Sbjct: 683 IAGMFQTRRVEEAKDLFASI---SRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQN 739

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
              + D    N ++       +I  A AY  ++ +R F  + +T   L++    +G   E
Sbjct: 740 AGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799

Query: 350 ASHF 353
              F
Sbjct: 800 QIRF 803


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 218/457 (47%), Gaps = 3/457 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V+  L  D   + ++I   C    +  A  +   M  KG + + +++  L++  C+   +
Sbjct: 231 VQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRV 290

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  +  +M E    P   TY   I   C++    +AL++F  M     +PN  T+ +L
Sbjct: 291 DEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVL 350

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           + +LC+     DA K L  +L   +      V+T   L+D Y K G    AL + + M  
Sbjct: 351 ICSLCEDSNFDDAKKILNGML---EKGLIPSVVTYNALIDGYCKKGLSASALEILSLMES 407

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
            N   +   YN LI GFC   +I  A +   +ML+R   P+V+TYN L++  CK+G L  
Sbjct: 408 NNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGS 467

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A     +++++G+ PD+ +Y   I  LC  G + +AR    S+ EK +     I++ +ID
Sbjct: 468 AYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLID 527

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           GY + G +S+   + D MLS G   N  T+N+LI    +  +  +A  L   M+   I P
Sbjct: 528 GYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEP 587

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
              TY +LI           A  ++D+ML  G  PD+  YT  I  +C+ G +K+AE + 
Sbjct: 588 AADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLI 647

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            K+   G+  D + + +    Y R    D A  I ++
Sbjct: 648 CKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKR 684



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 210/438 (47%), Gaps = 3/438 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I   C   ++  AL L  +M +    P V T+  ++  LC++G   +A ++ +EM+
Sbjct: 277 YTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMT 336

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TY   I   C  +  D A  + + M   G+ P+ VT+N L+   CKKGL  
Sbjct: 337 EKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSA 396

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A++ L  +   +    + +  T   L+  + +  +  +A++L + M ++ +Q ++V YN
Sbjct: 397 SALEILSLM---ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYN 453

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI+G C  GD+ SA+     M + G +PD  TY+  ++ LCK+G ++EA   +  L + 
Sbjct: 454 ILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEK 513

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+  +++ Y T+I G C  G +   R  L  ML    VP    +N +IDGY +  +   A
Sbjct: 514 GIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEA 573

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + D+M+   +     T+  LI    +      A  +  +ML  G  PDVF Y   I A
Sbjct: 574 RLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHA 633

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C+ G +  A  L  +M  +GI PD + YT  I  +   G++  A  +  ++  +G    
Sbjct: 634 YCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPS 693

Query: 541 HIPFRILKKRYRRMKESD 558
           +  +  L K     K  +
Sbjct: 694 YYTYSCLIKHLSNAKPKE 711



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 213/426 (50%), Gaps = 3/426 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+     P++ T N +VN  CK+G++ +A+  + ++ +   S +  TY + I GYCR  
Sbjct: 194 EMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNK 253

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            +D A  +F +M N G   N V++  L+H  C+   + +A+K   ++  D+       V 
Sbjct: 254 NVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDN---CWPTVR 310

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T T+++ +  + G K +AL ++ +M +K+ Q ++  Y VLI   C + +   A      M
Sbjct: 311 TYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGM 370

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L++G +P V+TYN L++  CK+G    A     ++     +P+  +Y  +I G C   +I
Sbjct: 371 LEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNI 430

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA   L  MLE+ + P    +N++I G  + GDL +A+ +  LM   G+  + +T++  
Sbjct: 431 HKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVF 490

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    + G + +A SL + +   GI  +   Y+ LI   C +G +     L D+ML  G 
Sbjct: 491 IDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGC 550

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            P+ ITY  LI G+C   N KEA  +   +    +      + IL     +  E D+A D
Sbjct: 551 VPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHD 610

Query: 563 IHQKWL 568
           +  + L
Sbjct: 611 MFDQML 616



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 185/378 (48%), Gaps = 3/378 (0%)

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  +    R   +D+   ++  M ++ + PN  T N +V+  CK G + +A  ++ +++
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                  + D  T T L+  Y +N +   A A++  M  K    + V+Y  LI+GFC   
Sbjct: 232 ---QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEAR 288

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A   F QM +    P V TY  ++  LC+ G+  EA + +  +++    P+  +Y 
Sbjct: 289 RVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYT 348

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +I  LC   +   A++ L  MLEK ++P    +N +IDGY + G  ++A  I  LM S 
Sbjct: 349 VLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESN 408

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
             S N  T+N LIL   RG +I  A SL  +ML   + P+V TYN+LI   C  G +  A
Sbjct: 409 NCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA 468

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
            +L   M   G+ PD  TY+  I   C RG ++EA  +F  ++  G+  + + +  L   
Sbjct: 469 YKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDG 528

Query: 551 YRRMKESDKARDIHQKWL 568
           Y ++ +    R +  K L
Sbjct: 529 YCKVGKVSDGRFLLDKML 546



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 201/474 (42%), Gaps = 32/474 (6%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R +  +I   C G  I  A+ L  KM+++   P+V+T+N L++  CK GDL  A  ++  
Sbjct: 415 RTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSL 474

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M+E    P+  TY+ FI   C+   +++A  LF ++   GI+ N V ++ L+   CK G 
Sbjct: 475 MNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGK 534

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           + D    L ++L+        + IT   L+D Y K  +  +A  L + M +++I+     
Sbjct: 535 VSDGRFLLDKMLS---AGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADT 591

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y +LI+    + +   A   F QML  G  PDV  Y   ++  C  G+L +A      ++
Sbjct: 592 YTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMN 651

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC---- 414
             G+ PD + Y   I      G I  A   L  M E    P  + ++ +I          
Sbjct: 652 AKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKE 711

Query: 415 ------------GDLSNAFS----------IRDL---MLSFGVSSNVFTFNALILAETRG 449
                       G  SN FS            DL   M   G + N  T+   I    + 
Sbjct: 712 VSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKV 771

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G +  A  L   M   G  P+   YN L+G SC LG    A++  D M+     P + + 
Sbjct: 772 GCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSC 831

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
             L+ G    GN ++A+ VF          D + +++L     +   SDK  D+
Sbjct: 832 KLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDL 885



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 119/254 (46%)

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           + + +ML     P++ T NT++N  CK G + EA  +   + + G++ D  +Y ++I G 
Sbjct: 190 SVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGY 249

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C + ++  A    LSM  K  +     +  +I G+     +  A  +   M        V
Sbjct: 250 CRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTV 309

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+  +I A  + G   +A ++ KEM      P+V TY +LI + C   +   A ++ + 
Sbjct: 310 RTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNG 369

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           ML +G+ P ++TY  LI G+C +G    A E+ + +++   + +   +  L   + R K 
Sbjct: 370 MLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKN 429

Query: 557 SDKARDIHQKWLLR 570
             KA  +  K L R
Sbjct: 430 IHKAMSLLHKMLER 443



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 125/301 (41%), Gaps = 9/301 (2%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+  G+ PDV  +   ++  C  G L+ A+ +I +M+     P+   Y  FI  Y R  
Sbjct: 614 QMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFG 673

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            +D A  +   M   G  P+  T++ L+  L         V    E+     G A++D  
Sbjct: 674 SIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAK--PKEVSSSSELSDLSSGVASNDFS 731

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
                +D  F        L L+  M +     +   Y   I G C  G +  A   F  M
Sbjct: 732 NCWRRVDYEF-------TLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHM 784

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            ++G  P+   YN+LL C C+ G   EA  +  ++ +    P   S K ++ GL   G+ 
Sbjct: 785 KEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGND 844

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA+    S L+     +  +W V+IDG  + G       +  +M + G   +  T++ L
Sbjct: 845 EKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSML 904

Query: 443 I 443
           I
Sbjct: 905 I 905



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 32/285 (11%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A I   C  G++  A  L  KM  KG +PD + +   ++   + G ++ A  +++ M 
Sbjct: 627 YTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMH 686

Query: 181 EMRPSPNCATYNAFI-----------------------------TGYCRVNELDKALHLF 211
           E+   P+  TY+  I                             +   R  + +  L LF
Sbjct: 687 EVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLF 746

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             MA +G  PN  T+   +  LCK G L  A +    +   + G++ ++ I +++L  S 
Sbjct: 747 GKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHM--KEKGQSPNEDIYNSLLGCS- 803

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            + G   +A+   + M +      + +  +L+ G    G+   A   FC  L+  +  D 
Sbjct: 804 CQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDE 863

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           + +  L++ L K+G  D+ S  +G++   G      +Y  +I+G 
Sbjct: 864 MVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 233/483 (48%), Gaps = 37/483 (7%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM-- 179
            ++++  C  G + +AL L  K+ + G  P+ +T++ L+   C  G++EKA  +  +M  
Sbjct: 329 TSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKL 388

Query: 180 SEMRPS--------------------------------PNCATYNAFITGYCRVNELDKA 207
           + + PS                                 N  TYN  ++  C+  ++D+A
Sbjct: 389 NGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEA 448

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M N G+ PN V++N ++   C+KG +  A     ++LA D      +V+T +IL
Sbjct: 449 CSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD---LKPNVVTYSIL 505

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D  FK GD  +AL L++ M   NI      +N +ING C  G +S A       L+ GF
Sbjct: 506 IDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGF 565

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +P  +TYN++++   K+G +D A   Y  + + GV+P+ ++Y ++I G C    I  A +
Sbjct: 566 IPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALK 625

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M EK +  +   ++ +IDG+ +  D+ +A  +   +L  G+S N   +N++I    
Sbjct: 626 TRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFR 685

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
              ++  A    K+M+ D I  D+ TY  LI      G +  A  LY EML +GI PDII
Sbjct: 686 DLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDII 745

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           T+  L+ G C +G ++ A ++  ++    +    + +  L   Y R     +A  +H + 
Sbjct: 746 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 805

Query: 568 LLR 570
           L R
Sbjct: 806 LDR 808



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 218/437 (49%), Gaps = 13/437 (2%)

Query: 98  LDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           L+ L+ M++ G  P   T         +VI      G +  AL L+ +MI  G   +++ 
Sbjct: 275 LELLEEMKERGWVPSEATF-------TSVIVACVAQGNMVEALRLKEEMINCGKPMNLVV 327

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
              L+   C  G+L+ A ++  +++E    PN  TY+  I G C    ++KA  L++ M 
Sbjct: 328 ATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMK 387

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
            NGI P+    N L+    K  L  +A K   E  A D G A  ++ T  I+M    K G
Sbjct: 388 LNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE--AVDCGVA--NIFTYNIMMSWLCKGG 443

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
              +A +L ++M  + +  ++V+YN +I G C  G++  A + F  ML R   P+V+TY+
Sbjct: 444 KMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYS 503

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            L++   K+G  ++A   +  +    +AP   ++ TII GLC  G + +AR+ L + LE+
Sbjct: 504 ILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEE 563

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
             +P    +N I+DG+ + G++ +A ++   M  FGVS NV T+ +LI    +   I  A
Sbjct: 564 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLA 623

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
              + EM   G+  DV  Y+ LI   C    +  A  L+ E+L  G++P+ I Y  +I G
Sbjct: 624 LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISG 683

Query: 516 HCARGNMKEAEEVFAKI 532
                NM+ A   + K+
Sbjct: 684 FRDLNNMEAALVWYKKM 700



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 219/438 (50%), Gaps = 7/438 (1%)

Query: 81  GNPQAVFNALDLI---LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTA 137
           G P +VFN   L+   LK  L    +      V C +   +  ++ ++  LC GGK+  A
Sbjct: 390 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNI-MMSWLCKGGKMDEA 448

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
             L   M+ +G VP+V+++N ++   C+ G+++ A  V  +M      PN  TY+  I G
Sbjct: 449 CSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDG 508

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
             +  + +KAL LF  M +  I P   T N +++ LCK G + +A   L   L  ++G  
Sbjct: 509 NFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFL--EEGFI 566

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
            S  +T   ++D + K G+   ALA++ +M +  +  ++V Y  LINGFC +  I  A  
Sbjct: 567 PS-CMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALK 625

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
              +M ++G   DV  Y+ L++  CK+  ++ A   +  L + G++P++I Y ++I G  
Sbjct: 626 TRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFR 685

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
              ++  A  +   M+   +  +   +  +IDG  + G L  A  +   MLS G+  ++ 
Sbjct: 686 DLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDII 745

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           TF+ L+      G + +A  + +EM    + P V  YN LI      G++  A  L+DEM
Sbjct: 746 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 805

Query: 498 LRRGITPDIITYTELIKG 515
           L RG+ PD +TY  LI G
Sbjct: 806 LDRGLVPDDVTYDILING 823



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 220/455 (48%), Gaps = 4/455 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I+ +C        L L  +M ++G VP   T   ++      G++ +A 
Sbjct: 251 VKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEAL 310

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM       N     + + GYC    LD AL+LF+ +  +G+ PN+VT+++L+   
Sbjct: 311 RLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGC 370

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C  G +  A +   ++  +        V     L+  Y K     +A  L+++     + 
Sbjct: 371 CNSGNIEKASELYTQMKLNG---IPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV- 426

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +I  YN++++  C  G +  A +    M+ +G +P+V++YN ++   C++G +D AS  
Sbjct: 427 ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSV 486

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  +    + P+ ++Y  +I G    GD  KA +    ML  ++ P    +N II+G  +
Sbjct: 487 FSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCK 546

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G +S A       L  G   +  T+N+++    + G+I  A ++ +EM   G+ P+V T
Sbjct: 547 VGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVT 606

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  LI   C    I LAL+  DEM  +G+  D+  Y+ LI G C R +M+ A+++F ++ 
Sbjct: 607 YTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELL 666

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            +GL+ + I +  +   +R +   + A   ++K +
Sbjct: 667 EVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI 701



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/414 (22%), Positives = 196/414 (47%), Gaps = 39/414 (9%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            +N  +  Y R N ++ A+  F+ M    + P     NIL+ AL ++ ++G+      ++
Sbjct: 152 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 211

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +         D  T  +++ +  K G   +A   + +  ++ ++ D  AY+++I   C  
Sbjct: 212 VLRG---IYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 268

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNT--------------------LLNC--------- 340
            + +       +M +RG++P   T+ +                    ++NC         
Sbjct: 269 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 328

Query: 341 ------LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
                  C QG LD A + +  +++ G+ P++++Y  +I+G C  G+I KA E    M  
Sbjct: 329 TSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKL 388

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             + P     N ++ GY +      A  + D  +  GV +N+FT+N ++    +GG + +
Sbjct: 389 NGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDE 447

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A SL   M+  G+ P+V +YN +I   C  G++ +A  ++ +ML R + P+++TY+ LI 
Sbjct: 448 ACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILID 507

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+  +G+ ++A ++F ++ +L +A     F  +     ++ +  +ARD  + +L
Sbjct: 508 GNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFL 561



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 77/373 (20%), Positives = 143/373 (38%), Gaps = 55/373 (14%)

Query: 199 CRVNELDKALHLFS-TMANNGIRPNRVTHNILVHALCKKGLL-GDAVKFLGEVLADDDGK 256
           C VN+   AL  F       G       + +L+H L +     G A K L   ++ D   
Sbjct: 69  CHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSDP 128

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
                 +  + +D       +F            + + D   +N L+N +     I +A 
Sbjct: 129 ------SPVVFVDHLINCAKRF------------DFELDHRVFNYLLNAYIRANRIENAI 170

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F  M+ +  +P V   N LL  L ++  + E    Y  +   G+  D  +   +++  
Sbjct: 171 DCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRAC 230

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
              G + +A E+     E+ V  +   +++II    +                   +SN+
Sbjct: 231 LKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCK-----------------KPNSNL 273

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
                                L +EM   G  P   T+  +I A    G++  AL+L +E
Sbjct: 274 ------------------GLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEE 315

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M+  G   +++  T L+KG+CA+GN+  A  +F KI   GL  + + + +L +       
Sbjct: 316 MINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGN 375

Query: 557 SDKARDIHQKWLL 569
            +KA +++ +  L
Sbjct: 376 IEKASELYTQMKL 388



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 123/301 (40%), Gaps = 23/301 (7%)

Query: 289 QKNIQTDIVAYNVLINGF-CLNGDISSAFAYFCQM-LKRGFLPDVITYNTLLNCLCKQ-- 344
           Q + +T  ++ N +I+   C   D  SA  YF +   +RGF+  V  Y  LL+ L +   
Sbjct: 50  QIHQETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPE 109

Query: 345 --------------GKLDEAS-----HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
                         G  D +      H      +     D   +  ++        I  A
Sbjct: 110 THGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENA 169

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            +   +M+ + V+P     N+++    R   +     + + M+  G+  + FT + ++ A
Sbjct: 170 IDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRA 229

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G + +A    +E    G+  D   Y+++I A C   + +L L+L +EM  RG  P 
Sbjct: 230 CLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPS 289

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
             T+T +I    A+GNM EA  +  ++   G  ++ +    L K Y      D A ++  
Sbjct: 290 EATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFN 349

Query: 566 K 566
           K
Sbjct: 350 K 350


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/451 (30%), Positives = 216/451 (47%), Gaps = 36/451 (7%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R + +   +P+ +T+  L++  CK+GD+E+ + +++EM E   +PN  TY++ I GY + 
Sbjct: 367 RALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKK 426

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE----------VLA 251
             LD+A+++   M +  I PN   + IL+   CK G    A     E          VL 
Sbjct: 427 GILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLF 486

Query: 252 D------------DDGKATSDVITS----------TILMDSYFKNGDKFQALALWNDMFQ 289
           D            D+ +     +TS          T LMD +FK G +  AL +  +M +
Sbjct: 487 DVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTE 546

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K+I  D+V YNVLING   +G   +   Y   M++ G  P+  TYN ++   CKQG+LD 
Sbjct: 547 KSIPFDVVTYNVLINGLLEHGKYEAKSVY-SGMIEMGLAPNQATYNIMIKAYCKQGELDN 605

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   +  +    + P  I+  T++ GL   G+I KA   L  M    + P   I  V+++
Sbjct: 606 ALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLN 665

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
              + G  +    + + ++  G+  N   +N LI+   R      A S+ K M+ DG   
Sbjct: 666 ASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVA 725

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D  TYN LI   C   H+  AL  Y +ML  G++P+I+TY  L+ G    G M E +E+F
Sbjct: 726 DTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELF 785

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRM---KES 557
            K++  GL  D   +  L   Y ++   KES
Sbjct: 786 DKMKENGLNPDASTYDTLISGYGKIGNKKES 816



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 223/462 (48%), Gaps = 25/462 (5%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G++  AL L  +M ++G + D++++N L+N  CK G+ +KA  ++ E+SE 
Sbjct: 152 TLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISES 211

Query: 183 RP---------------------SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP 221
           R                        +  TY   I+ YC+ + L++A  L+  M  NG  P
Sbjct: 212 RGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLP 271

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           + VT++ +V+ LCK G L +A + L E+          + +  T L+DS FK G  ++A 
Sbjct: 272 DVVTYSSIVNGLCKDGRLSEAQELLREM---KKMGVDPNHVAYTTLIDSLFKAGSAWEAF 328

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
           A  + +  + +  D+V    L++G   +     A   F  + K   +P+ ITY  L++  
Sbjct: 329 ACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGY 388

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK G ++        + +  + P+ I+Y +II G    G + +A   +  ML+++++P  
Sbjct: 389 CKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNA 448

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
           +++ ++IDGY + G    A  + + M   G+  N   F+ L+    RG  + +A  L K+
Sbjct: 449 YVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKD 508

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           +   G+  D   Y  L+      G    AL + +EM  + I  D++TY  LI G    G 
Sbjct: 509 VTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGK 568

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
             EA+ V++ +  +GLA +   + I+ K Y +  E D A ++
Sbjct: 569 Y-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALEL 609



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 219/480 (45%), Gaps = 53/480 (11%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  VI   C  G +  A      M++K T  D +T N LV   C+IG  +  +
Sbjct: 73  VEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGE 132

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++  +       +   +N  I GYC+  E+  AL L   M   G+  + V++N L++  
Sbjct: 133 RIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGF 192

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G    A   L E+    + +   D +   I  D   K  D              N++
Sbjct: 193 CKRGEYDKAKSLLHEI---SESRGVKDSVFFNI--DDRIKKDDNL------------NLE 235

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D++ Y  +I+ +C    +  A A + +M+  GFLPDV+TY++++N LCK G+L EA   
Sbjct: 236 ADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQEL 295

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHG-------------------DIV----------- 383
              + K GV P+ ++Y T+I  L   G                   D+V           
Sbjct: 296 LREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFK 355

Query: 384 -----KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
                +A +   ++ + +++P    +  +IDGY + GD+    S+   M    ++ NV T
Sbjct: 356 SSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVIT 415

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           ++++I   T+ G + +A ++ K+ML   I P+ + Y +LI   C  G   +A  LY+EM 
Sbjct: 416 YSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMK 475

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF-RILKKRYRRMKES 557
             G+  + + +  L+        M EAEE+   + + GL +DH+ +  ++   ++  KES
Sbjct: 476 LSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKES 535



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 212/450 (47%), Gaps = 31/450 (6%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+     P+V THN LV+  CK+G+L  A  ++R +       +  TYN  I G+C+  
Sbjct: 35  EMLCSAVPPNVYTHNVLVHAWCKMGNLILALDLLRNVD---VEVDTVTYNTVIWGFCQHG 91

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD--DGKATSD 260
            +++A    S M       + +T NILV   C+ GL     K+ GE + D+   G    D
Sbjct: 92  LVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGL----AKY-GERIMDNLVSGGTCKD 146

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           VI    L+D Y K G+   AL L   M ++ + +DIV+YN LINGFC  G+   A +   
Sbjct: 147 VIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLH 206

Query: 321 QMLK-RG--------------------FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           ++ + RG                       D+ITY T+++  CKQ  L+EA   Y  +  
Sbjct: 207 EISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMII 266

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G  PD ++Y +I+ GLC  G + +A+E L  M +  V P    +  +ID   + G    
Sbjct: 267 NGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWE 326

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AF+ +  ++  G++ ++     L+    +     +A  + + +    + P+  TY  LI 
Sbjct: 327 AFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALID 386

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C +G +     L  EM  + I P++ITY+ +I G+  +G + EA  V  K+    +  
Sbjct: 387 GYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIP 446

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWLL 569
           +   + IL   Y +  + + A D++ +  L
Sbjct: 447 NAYVYAILIDGYCKAGKQEIATDLYNEMKL 476



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 222/496 (44%), Gaps = 72/496 (14%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I   C  G +     L ++M +K   P+V+T++ ++N   K G L++A +V+++M 
Sbjct: 381 YTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKML 440

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN   Y   I GYC+  + + A  L++ M  +G++ N V  ++LV+ L +   + 
Sbjct: 441 DQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMD 500

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A + L +V +        D +  T LMD +FK G +  AL +  +M +K+I  D+V YN
Sbjct: 501 EAEELLKDVTSRG---LLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYN 557

Query: 301 VLING----------------------------------FCLNGDISSAFAYFCQMLKRG 326
           VLING                                  +C  G++ +A   + +M    
Sbjct: 558 VLINGLLEHGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHK 617

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG----------L 376
            +P  IT NTL+  L + G++++A +    +S  G+ P+ + ++ ++            L
Sbjct: 618 IMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVL 677

Query: 377 CIHGDIV-------------------------KAREFLLSMLEKSVVPEPHIWNVIIDGY 411
            +H  +V                         KA   L  M+    V +   +N +I GY
Sbjct: 678 QMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGY 737

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
                +  A +    ML+ GVS N+ T+N L+      G + +   L  +M  +G+ PD 
Sbjct: 738 CESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDA 797

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TY+ LI     +G+   +++LY EM+ +G  P   TY  LI      G M +A E+  +
Sbjct: 798 STYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNE 857

Query: 532 IQTLGLAIDHIPFRIL 547
           +Q  G+      + IL
Sbjct: 858 MQVRGVPPSSSTYDIL 873



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 214/464 (46%), Gaps = 21/464 (4%)

Query: 86  VFNALDLILKENLDRLKTMRDTGPVRCTLET-----DYRRHVAVIRDLCLGGKIGTALWL 140
           V N L  +L  NL R K M +   +   + +     D+  + +++      GK   AL +
Sbjct: 481 VNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNM 540

Query: 141 RRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCR 200
             +M +K    DV+T+N L+N L + G  E A  V   M EM  +PN ATYN  I  YC+
Sbjct: 541 VEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCK 599

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
             ELD AL L++ M ++ I P+ +T N LV  L + G +  A+  L E+          +
Sbjct: 600 QGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSV---MGIHPN 656

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           ++   +L+++  K+G     L +   +    ++ +  AYN LI  FC       A +   
Sbjct: 657 LVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLK 716

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            M++ GF+ D +TYN L+   C+   + +A   Y  +   GV+P+ ++Y  ++ GL   G
Sbjct: 717 YMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAG 776

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            + +  E    M E  + P+   ++ +I GYG+ G+   +  +   M++ G      T+N
Sbjct: 777 LMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYN 836

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG-HIHL---------- 489
            LI    + G +  A  L  EM + G+ P   TY++LI   CNL  H  L          
Sbjct: 837 VLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRT 896

Query: 490 -ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            A  L  EM  +G  P   T   +       G M +AE++  +I
Sbjct: 897 DAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEI 940



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 206/449 (45%), Gaps = 27/449 (6%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M +   VP +L  N L+      G + +   +  EM      PN  T+N  +  +C++  
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           L  AL L   + N  +  + VT+N ++   C+ GL+  A  FL  ++  D      D IT
Sbjct: 61  LILALDL---LRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKD---TCFDTIT 114

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             IL+  + + G       + +++       D++ +N LI+G+C  G++S A     +M 
Sbjct: 115 CNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMR 174

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT---------------------GV 362
           K G L D+++YNTL+N  CK+G+ D+A      +S++                      +
Sbjct: 175 KEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNL 234

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D I+Y TII   C    + +AR     M+    +P+   ++ I++G  + G LS A  
Sbjct: 235 EADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQE 294

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M   GV  N   +  LI +  + GS ++AF+ + ++++ G+  D+     L+    
Sbjct: 295 LLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLF 354

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
                  A  ++  + +  + P+ ITYT LI G+C  G+M+  E +  +++   +  + I
Sbjct: 355 KSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVI 414

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLRN 571
            +  +   Y +    D+A ++ +K L +N
Sbjct: 415 TYSSIINGYTKKGILDEAINVMKKMLDQN 443


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 211/424 (49%), Gaps = 13/424 (3%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L +++ +K T     ++N L+  LC  G ++ A  +  EM+     P+  TY   + 
Sbjct: 241 AVQLFQELPEKNTC----SYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVH 293

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           GYC ++EL+ A+ L S MA  G+  N V +  ++  LC +G + DAV+ + +++      
Sbjct: 294 GYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG--- 350

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D    T +M  + + GD   A   +++M ++ +  D V Y  LING C  G++  A 
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M  +G   D +TY  L++  CK GK+ EA   +  + +  V P+ ++Y  +  GL
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  GD+  A E L  M  K +      +N +I+G  + G+L  A      M   G+  +V
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           +T+  +I A  +   +  A SL +EML  GI P + TYN+L+   C  G +    +L + 
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRR 553
           ML + I P+  TY  L+K +C   NMK   E++  + +  +  +   + IL K   + R 
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 554 MKES 557
           MKE+
Sbjct: 651 MKEA 654



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 211/445 (47%), Gaps = 41/445 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS--- 180
           +++ LC  G+I  A  L  +M    + PDV+T+  +V+  C + +LE A  ++ EM+   
Sbjct: 259 LLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARG 315

Query: 181 -EMRPSP-------------------------------NCATYNAFITGYCRVNELDKAL 208
            E+ P                                 + A +   ++G+CR  +L  A 
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           + F  M   G+  + VT+  L++ LC+ G L +A + L E+   +D     D +T T+L+
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM---EDKGLDVDAVTYTVLI 432

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           D Y K G   +A  + N M QK +  ++V Y  L +G C  GD+ +A     +M  +G  
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
            ++ TYN+L+N LCK G L++A      + + G+ PD  +Y TII  LC   ++ +A   
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSL 552

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  ML+K + P    +NV+++G+   G +     + + ML   +  N  T+N+L+     
Sbjct: 553 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCI 612

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
             ++     + K ML   + P+  TYN+LI   C   ++  AL  + EM+ +G      +
Sbjct: 613 EKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASS 672

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  LI+    +    EA  +F K++
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMR 697



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 188/398 (47%), Gaps = 5/398 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE +   + +VI  LC  G++  A+ +   M+  G V D      +++  C+ GDL  A 
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           +   EM +   + +  TY A I G CR  EL +A  +   M + G+  + VT+ +L+   
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G + +A     +++     + T +V+T T L D   K GD   A  L ++M  K ++
Sbjct: 436 CKVGKMTEAFLVHNKMV---QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +I  YN LING C  G++  A      M + G  PDV TY T++  LC+  +LD A   
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSL 552

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+ P  ++Y  ++ G C+ G +   +  L  MLEK++ P    +N ++  Y  
Sbjct: 553 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCI 612

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             ++ +   I   MLS  V  N  T+N LI    +  ++ +A     EM+  G      +
Sbjct: 613 EKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASS 672

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGIT--PDIITY 509
           YN LI           A +L+++M +  +T  PD+  +
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNF 710



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 184/383 (48%), Gaps = 3/383 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+   C  G +  A     +M ++G   D +T+  L+N LC+ G+L++A+ V++EM +  
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TY   I GYC+V ++ +A  + + M    + PN VT+  L   LCK+G +  A 
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E+ +        ++ T   L++   K G+  QA+    DM +  ++ D+  Y  +I
Sbjct: 481 ELLHEMCSKG---LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
              C + ++  A +   +ML +G  P ++TYN L+N  C  G+++        + +  + 
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+  +Y ++++  CI  ++    E    ML + VVP  + +N++I G+ +  ++  A   
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYF 657

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+  G      ++NALI    +     +A  L ++M  D +  +   YN  I  S N
Sbjct: 658 HSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFN 717

Query: 484 LGHIHLALQLYDEMLRRGITPDI 506
             ++   L L DE++   +   I
Sbjct: 718 EDNLESTLALCDELVEVTLVKSI 740


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 216/428 (50%), Gaps = 12/428 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++G A+    +M+++  VP++   N L+  LC+ G +++A  + R +   +
Sbjct: 9   LIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGI---Q 65

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDA 242
            SP+  T N  I G+C +  LDKAL LF  M  N  + P   T+  ++   CK   L  A
Sbjct: 66  CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQA 125

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNV 301
            + L     ++    +SDVI  T +   + K     +A  L  DM +K + + DIVA+NV
Sbjct: 126 RQLL-----EESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +I+GFC  G +  A+     ++  G +P+ +TY TL++  CK G L EA   + VLS   
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240

Query: 362 --VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
               P+ +++  +I GLC    +  A E +  M  + +  +   +  ++DG  + G  S 
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
              + + ML  G + +V T+  L+ A  + GS+ DA  + + M+  GI PDV TY +L+ 
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                G +  A + ++++LR    P  + Y+ L++G C    + EA + + ++    LA 
Sbjct: 361 GLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAP 420

Query: 540 DHIPFRIL 547
           D    ++L
Sbjct: 421 DPATCKLL 428



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 177/400 (44%), Gaps = 43/400 (10%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE-M 182
           ++  LC  GK+  A+ + R +      P V+T N L+N  C++  L+KA  +  EM +  
Sbjct: 44  LLASLCQAGKMDQAMAIFRGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNF 100

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFST----------------------------- 213
              P   TY A I  YC+++ LD+A  L                                
Sbjct: 101 ALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQ 160

Query: 214 -----MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
                +     +P+ V  N+++H  CK G + +A + L  +++        + +T T L+
Sbjct: 161 LLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVS---MGCVPNAVTYTTLI 217

Query: 269 DSYFKNGDKFQALALWNDMFQKN--IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           D + K+G+  +AL L+  +  ++   + ++V +N LI+G C    +  AF    QM  R 
Sbjct: 218 DGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARD 277

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
              D  TY TL++ LCKQG+  E S  +  + + G  P  ++Y T++   C  G +  A+
Sbjct: 278 LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQ 337

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + + SM+ K + P+   + V+++G    G +  A    + +L          ++AL+   
Sbjct: 338 QVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGC 397

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
            +   + +A     EML   + PD  T  LL+   C  G 
Sbjct: 398 CKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 40/262 (15%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS--E 181
           +I   C  G++  A  +   ++  G VP+ +T+  L++  CK G+L +A  + + +S  +
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHL------------------------------- 210
               PN  T+NA I+G C+ + L+ A  L                               
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300

Query: 211 ----FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
               F  M   G  P+ VT+  LVHA CK G L DA + +  ++A        DV T T+
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKG---IPPDVTTYTV 357

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L++  F+NG    A   +  + ++      V Y+ L+ G C    +  A  Y+ +ML R 
Sbjct: 358 LLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRR 417

Query: 327 FLPDVITYNTLLNCLCKQGKLD 348
             PD  T   L+  LCK+G+ D
Sbjct: 418 LAPDPATCKLLVEMLCKRGRTD 439



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 137/353 (38%), Gaps = 104/353 (29%)

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA-SHFYGVL 357
           ++VLI G C  G +  A   + QML+R  +P++   N LL  LC+ GK+D+A + F G+ 
Sbjct: 6   FSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGIQ 65

Query: 358 SKTGV--------------------------------APDQISYKTIIQGLCIHGDIVKA 385
               V                                 P+  +Y  II+  C    + +A
Sbjct: 66  CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQA 125

Query: 386 RE---------------------------------FLLSMLE-KSVVPEPHIWNVIIDGY 411
           R+                                  LL M+E KS  P+   WNVII G+
Sbjct: 126 RQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGF 185

Query: 412 GRCGDLSNAFSIRDLMLSFG-------------------------------------VSS 434
            + G +  A+ + + ++S G                                        
Sbjct: 186 CKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEP 245

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           NV TFNALI    +   +  AF L K+M    +  D FTY  L+   C  G      +++
Sbjct: 246 NVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVF 305

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +EMLR G  P ++TYT L+  HC  G++++A++V   +   G+  D   + +L
Sbjct: 306 EEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 7/201 (3%)

Query: 78  DNEGNPQAV-FNAL--DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKI 134
           D+   P  V FNAL   L   + L+    +      R  L  D   +  ++  LC  G+ 
Sbjct: 240 DHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKAR-DLRADTFTYTTLMDGLCKQGRT 298

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
                +  +M+++G  P V+T+  LV+  CK G L+ A  VIR M      P+  TY   
Sbjct: 299 SEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           + G     ++  A   F  +      P  V ++ LV   CK  L+ +AVK+  E+L   D
Sbjct: 359 LEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEML---D 415

Query: 255 GKATSDVITSTILMDSYFKNG 275
            +   D  T  +L++   K G
Sbjct: 416 RRLAPDPATCKLLVEMLCKRG 436



 Score = 46.2 bits (108), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P+ FT+++LI   C  G +  A++ Y++ML R   P++     L+   C  G M +A  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 529 FAKIQ 533
           F  IQ
Sbjct: 61  FRGIQ 65


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 211/424 (49%), Gaps = 13/424 (3%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L +++ +K T     ++N L+  LC  G ++ A  +  EM+     P+  TY   + 
Sbjct: 241 AVQLFQELPEKNTC----SYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVH 293

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           GYC ++EL+ A+ L S MA  G+  N V +  ++  LC +G + DAV+ + +++      
Sbjct: 294 GYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG--- 350

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D    T +M  + + GD   A   +++M ++ +  D V Y  LING C  G++  A 
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M  +G   D +TY  L++  CK GK+ EA   +  + +  V P+ ++Y  +  GL
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  GD+  A E L  M  K +      +N +I+G  + G+L  A      M   G+  +V
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           +T+  +I A  +   +  A SL +EML  GI P + TYN+L+   C  G +    +L + 
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRR 553
           ML + I P+  TY  L+K +C   NMK   E++  + +  +  +   + IL K   + R 
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 554 MKES 557
           MKE+
Sbjct: 651 MKEA 654



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 211/445 (47%), Gaps = 41/445 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS--- 180
           +++ LC  G+I  A  L  +M    + PDV+T+  +V+  C + +LE A  ++ EM+   
Sbjct: 259 LLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARG 315

Query: 181 -EMRPSP-------------------------------NCATYNAFITGYCRVNELDKAL 208
            E+ P                                 + A +   ++G+CR  +L  A 
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           + F  M   G+  + VT+  L++ LC+ G L +A + L E+   +D     D +T T+L+
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM---EDKGLDVDAVTYTVLI 432

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           D Y K G   +A  + N M QK +  ++V Y  L +G C  GD+ +A     +M  +G  
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
            ++ TYN+L+N LCK G L++A      + + G+ PD  +Y TII  LC   ++ +A   
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSL 552

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  ML+K + P    +NV+++G+   G +     + + ML   +  N  T+N+L+     
Sbjct: 553 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCI 612

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
             ++     + K ML   + P+  TYN+LI   C   ++  AL  + EM+ +G      +
Sbjct: 613 EKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASS 672

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  LI+    +    EA  +F K++
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMR 697



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 188/398 (47%), Gaps = 5/398 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE +   + +VI  LC  G++  A+ +   M+  G V D      +++  C+ GDL  A 
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           +   EM +   + +  TY A I G CR  EL +A  +   M + G+  + VT+ +L+   
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G + +A     +++     + T +V+T T L D   K GD   A  L ++M  K ++
Sbjct: 436 CKVGKMTEAFLVHNKMV---QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +I  YN LING C  G++  A      M + G  PDV TY T++  LC+  +LD A   
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSL 552

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+ P  ++Y  ++ G C+ G +   +  L  MLEK++ P    +N ++  Y  
Sbjct: 553 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCI 612

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             ++ +   I   MLS  V  N  T+N LI    +  ++ +A     EM+  G      +
Sbjct: 613 EKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASS 672

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGIT--PDIITY 509
           YN LI           A +L+++M +  +T  PD+  +
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF 710



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 184/383 (48%), Gaps = 3/383 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+   C  G +  A     +M ++G   D +T+  L+N LC+ G+L++A+ V++EM +  
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TY   I GYC+V ++ +A  + + M    + PN VT+  L   LCK+G +  A 
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E+ +        ++ T   L++   K G+  QA+    DM +  ++ D+  Y  +I
Sbjct: 481 ELLHEMCSKG---LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
              C + ++  A +   +ML +G  P ++TYN L+N  C  G+++        + +  + 
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+  +Y ++++  CI  ++    E    ML + VVP  + +N++I G+ +  ++  A   
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYF 657

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+  G      ++NALI    +     +A  L ++M  + +  +   YN  I  S N
Sbjct: 658 HSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFN 717

Query: 484 LGHIHLALQLYDEMLRRGITPDI 506
             ++   L L DE++   +   I
Sbjct: 718 EDNLESTLALCDELVEVTLVKSI 740


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 226/493 (45%), Gaps = 67/493 (13%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+    VP++ T N +VN   K+G++ +A+  + ++ +   SP+  TY + I GYCR N
Sbjct: 204 EMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNN 263

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD--------- 253
           +++ A  +F+ M N G R N V++  ++H LC+ G + + +    ++  DD         
Sbjct: 264 DVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYT 323

Query: 254 -----------------------DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
                                  +     +V T T+++D+  K     ++  + N+M +K
Sbjct: 324 VIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEK 383

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAF---------------------------------- 316
            +   +V YN LI G+C  G I +A                                   
Sbjct: 384 GLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKA 443

Query: 317 -AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                +ML+    P ++TYN+L++  CK G  D A     +L + G+ PDQ +Y   I  
Sbjct: 444 MTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDT 503

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           LC    + +A +   S+ EK +     ++  +IDG+ + G +  A S+ + M S     N
Sbjct: 504 LCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPN 563

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             T+N+LI    + G + +  S+ + M   G+ P V TY +LI      G    A ++++
Sbjct: 564 SSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFN 623

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
           +M+  G  PD+ TYT  I  +C  GN+KEAE + A++   G+  D + + +L   Y R+ 
Sbjct: 624 QMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLG 683

Query: 556 ESDKARDIHQKWL 568
            +  A ++ ++ L
Sbjct: 684 LAYDAFNVLKRML 696



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 195/422 (46%), Gaps = 5/422 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC-KIGDLEKADHVIREM 179
           +  +I  LC  G+I   + L +KM +    P V T+  +++ L     +LE  D +  EM
Sbjct: 287 YTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMD-LFNEM 345

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
            E    PN  TY   +   C+  +LD++  + + M   G+ P+ VT+N L+   C++G +
Sbjct: 346 RERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRI 405

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
             A++ LG +   +      +  T   L+  + K     +A+ L + M +  +   +V Y
Sbjct: 406 EAALEILGLM---ESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTY 462

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N LI+  C  G   SA+     + + G +PD  TY+  ++ LCK  +++EA   +  L +
Sbjct: 463 NSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKE 522

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+  +++ Y  +I G C  G I +A   L  M  +  +P    +N +I G  + G +  
Sbjct: 523 KGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQE 582

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
             S+ + M   GV   V T+  LI    R G    A  +  +M+  G  PDV+TY   I 
Sbjct: 583 GLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIH 642

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C  G++  A  +   M+  G+ PD +TYT LI  +   G   +A  V  ++   G   
Sbjct: 643 TYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDP 702

Query: 540 DH 541
            H
Sbjct: 703 SH 704



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 186/395 (47%), Gaps = 3/395 (0%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R +  +I  L    +    + L  +M ++   P+V T+  +V+ +CK   L+++  ++ E
Sbjct: 320 RTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNE 379

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M E    P+  TYNA I GYC    ++ AL +   M +N  RPN  T+N L+    K+  
Sbjct: 380 MMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKH 439

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           +  A+  L ++L   + K T  ++T   L+    K G    A  L + + +  +  D   
Sbjct: 440 VHKAMTLLSKML---ESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWT 496

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y+V I+  C +  +  A   F  + ++G   + + Y  L++  CK GK+DEA      + 
Sbjct: 497 YSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMH 556

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
                P+  +Y ++I G+C  G + +    + +M +  V P    + ++I+   R GD  
Sbjct: 557 SEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFD 616

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           +A  + + M+SFG   +V+T+ A I      G++ +A  +   M+  G+ PD  TY LLI
Sbjct: 617 HANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLI 676

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A   LG  + A  +   ML  G  P    +  LI
Sbjct: 677 SAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 166/358 (46%), Gaps = 3/358 (0%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           +YN  +    R   +D+   +++ M N+ I PN  T N +V+A  K G + +A  ++ ++
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
                   + D  T T L+  Y +N D   A  ++N M  K  + + V+Y  +I+G C  
Sbjct: 241 F---QAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEA 297

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G I    + F +M +    P V TY  +++ L    +  E    +  + +    P+  +Y
Sbjct: 298 GRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTY 357

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             ++  +C    + ++R  L  M+EK +VP    +N +I GY   G +  A  I  LM S
Sbjct: 358 TVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMES 417

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
                N  T+N LI   ++   +  A +L  +ML   + P + TYN LI   C  GH   
Sbjct: 418 NNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDS 477

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           A +L D +   G+ PD  TY+  I   C    M+EA ++F  ++  G+  + + +  L
Sbjct: 478 AYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTAL 535



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 159/339 (46%), Gaps = 3/339 (0%)

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           ++N L+  L +  ++ +  +   E+L D       ++ T   ++++Y K G+  +A    
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLND---MIVPNIYTLNTMVNAYSKMGNIVEANLYV 237

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           + +FQ  +  D   Y  LI G+C N D++SA+  F  M  +G   + ++Y T+++ LC+ 
Sbjct: 238 SKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEA 297

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
           G++DE    +  + +    P   +Y  II  L  +   ++  +    M E+S  P  H +
Sbjct: 298 GRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTY 357

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
            V++D   +   L  +  I + M+  G+  +V T+NALI      G I  A  +   M  
Sbjct: 358 TVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMES 417

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
           +   P+  TYN LI       H+H A+ L  +ML   +TP ++TY  LI   C  G+   
Sbjct: 418 NNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDS 477

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           A ++   ++  GL  D   + +      + K  ++A D+
Sbjct: 478 AYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDL 516



 Score = 46.6 bits (109), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 5/137 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E L  ++ M   G V+ T+ T    +  +I ++   G    A  +  +M+  G  PDV
Sbjct: 580 VQEGLSMVENMSKMG-VKPTVAT----YTILIEEMLREGDFDHANRVFNQMVSFGHKPDV 634

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+   ++  C  G++++A+ ++  M E    P+  TY   I+ Y R+     A ++   
Sbjct: 635 YTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKR 694

Query: 214 MANNGIRPNRVTHNILV 230
           M + G  P+    N L+
Sbjct: 695 MLDAGCDPSHPIWNNLI 711


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 217/448 (48%), Gaps = 38/448 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I+ LCL G+I  AL    K++  G   + +++  L+N LCK+G    A  ++R +   
Sbjct: 147 TLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGK 206

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   YN  I   C+V  +++A  L+S M + GI P+ VT+N L+   C  G + D 
Sbjct: 207 LVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKD- 265

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                                A  L+N M  +NI  ++  +N+L
Sbjct: 266 -------------------------------------ATDLFNKMIFENINPNVYTFNIL 288

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++GFC    +  A      M+K+G  PDV TYN+L++  C   ++++A H +  +S+ GV
Sbjct: 289 VDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGV 348

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+  SY  +I G C    + +A      M   +++P+   +N +IDG  + G +S A  
Sbjct: 349 NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALK 408

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M   GV  +  T+N+++ A  +   +  A +L  +M  +GI PD+ TY  L+   C
Sbjct: 409 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLC 468

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +  A  +++++L +G   D+  YT +I+G C+ G   E+ ++ +K++  G   + +
Sbjct: 469 KNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAV 528

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLR 570
            + I+        E+DKA  + ++ + R
Sbjct: 529 TYEIIICSLFDKDENDKAEKLLREMITR 556



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 204/407 (50%), Gaps = 5/407 (1%)

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
            T + L R+M   G   D++  + L+N   ++G    +  V+ ++ +M   PN  T    
Sbjct: 89  STVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTL 148

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           I G C   ++ +AL     +   G   N+V++  L++ LCK G    A++ L  V    D
Sbjct: 149 IKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRV----D 204

Query: 255 GK-ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
           GK    +V+    ++DS  K     +A  L+++M  K I  D+V YN LI+GFC+ G + 
Sbjct: 205 GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMK 264

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A   F +M+     P+V T+N L++  CK+ +L EA +   ++ K G+ PD  +Y +++
Sbjct: 265 DATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLM 324

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
              C+  ++ KA+    ++ ++ V P  H ++++I G+ +   +  A ++   M    + 
Sbjct: 325 DRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNII 384

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            +V T+N+LI    + G I  A  L  EM   G+  D  TYN ++ A C    +  A+ L
Sbjct: 385 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIAL 444

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             +M   GI PDI TYT L+ G C  G +++A  VF  +   G  +D
Sbjct: 445 LTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILD 491



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 153/295 (51%), Gaps = 3/295 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   + A+I   C+ GK+  A  L  KMI +   P+V T N LV+  CK   L++A 
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           +V+  M +    P+  TYN+ +  YC V E++KA H+F+T++  G+ PN  +++I++H  
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGF 362

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   + +A+    E+  ++      DV+T   L+D   K G    AL L ++M  + + 
Sbjct: 363 CKIKKVDEAMNLFKEMHCNN---IIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVP 419

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D + YN +++  C N  +  A A   +M   G  PD+ TY TL++ LCK G+L++A   
Sbjct: 420 HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIV 479

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           +  L   G   D   Y  +IQG C HG   ++ + L  M E   +P    + +II
Sbjct: 480 FEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIII 534



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 159/301 (52%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           ++ S  K+      ++L   M    I +D+V  ++LIN F   G    +F+   ++LK G
Sbjct: 78  ILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMG 137

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           + P+VIT  TL+  LC +G++ +A  F+  +   G   +++SY T+I GLC  G    A 
Sbjct: 138 YEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAAL 197

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + L  +  K V P   ++N IID   +   ++ AF +   M+S G+S +V T+NALI   
Sbjct: 198 QLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGF 257

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + DA  L  +M+ + I P+V+T+N+L+   C    +  A  +   M+++GI PD+
Sbjct: 258 CIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDV 317

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            TY  L+  +C    + +A+ +F  I   G+  +   + I+   + ++K+ D+A ++ ++
Sbjct: 318 FTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKE 377

Query: 567 W 567
            
Sbjct: 378 M 378



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 149/290 (51%)

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
           TSD++  +IL++ + + G    + ++   + +   + +++    LI G CL G I  A  
Sbjct: 104 TSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQ 163

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
           +  +++  GF  + ++Y TL+N LCK G+   A      +    V P+ + Y TII  +C
Sbjct: 164 FHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMC 223

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
               + +A +    M+ K + P+   +N +I G+   G + +A  + + M+   ++ NV+
Sbjct: 224 KVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVY 283

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           TFN L+    +   + +A ++   M+  GI PDVFTYN L+   C +  ++ A  +++ +
Sbjct: 284 TFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTI 343

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +RG+ P+I +Y+ +I G C    + EA  +F ++    +  D + +  L
Sbjct: 344 SQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSL 393



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 147/305 (48%), Gaps = 10/305 (3%)

Query: 265 TILMDSYFKNGD-KFQALALWNDMF-QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T L   + +N D K   ++ +N +  QKN +  I  +  ++     +   S+  +   QM
Sbjct: 39  TRLYSQFHENDDNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQM 98

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
              G   D++  + L+NC  + G+   +      + K G  P+ I+  T+I+GLC+ G I
Sbjct: 99  EFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQI 158

Query: 383 VKAREFLLSMLEKSVVPEPHI----WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            +A +F     +K V    H+    +  +I+G  + G  S A  +   +    V  NV  
Sbjct: 159 HQALQF----HDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVM 214

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N +I +  +   + +AF L  EM+  GI PDV TYN LI   C +G +  A  L+++M+
Sbjct: 215 YNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMI 274

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
              I P++ T+  L+ G C    +KEA+ V A +   G+  D   +  L  RY  +KE +
Sbjct: 275 FENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVN 334

Query: 559 KARDI 563
           KA+ I
Sbjct: 335 KAKHI 339



 Score = 43.1 bits (100), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 5/119 (4%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  M+D G     ++ D   +  ++  LC  G++  A  +   ++ KG + DV  +  ++
Sbjct: 445 LTKMKDEG-----IQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMI 499

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
              C  G  +++  ++ +M E    PN  TY   I      +E DKA  L   M   G+
Sbjct: 500 QGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 211/424 (49%), Gaps = 13/424 (3%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L +++ +K T     ++N L+  LC  G ++ A  +  EM+     P+  TY   + 
Sbjct: 241 AVQLFQELPEKNTC----SYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVH 293

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           GYC ++EL+ A+ L S MA  G+  N V +  ++  LC +G + DAV+ + +++      
Sbjct: 294 GYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG--- 350

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D    T +M  + + GD   A   +++M ++ +  D V Y  LING C  G++  A 
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M  +G   D +TY  L++  CK GK+ EA   +  + +  V P+ ++Y  +  GL
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  GD+  A E L  M  K +      +N +I+G  + G+L  A      M   G+  +V
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           +T+  +I A  +   +  A SL +EML  GI P + TYN+L+   C  G +    +L + 
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRR 553
           ML + I P+  TY  L+K +C   NMK   E++  + +  +  +   + IL K   + R 
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 554 MKES 557
           MKE+
Sbjct: 651 MKEA 654



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 211/445 (47%), Gaps = 41/445 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS--- 180
           +++ LC  G+I  A  L  +M    + PDV+T+  +V+  C + +LE A  ++ EM+   
Sbjct: 259 LLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARG 315

Query: 181 -EMRPSP-------------------------------NCATYNAFITGYCRVNELDKAL 208
            E+ P                                 + A +   ++G+CR  +L  A 
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           + F  M   G+  + VT+  L++ LC+ G L +A + L E+   +D     D +T T+L+
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM---EDKGLDVDAVTYTVLI 432

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           D Y K G   +A  + N M QK +  ++V Y  L +G C  GD+ +A     +M  +G  
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
            ++ TYN+L+N LCK G L++A      + + G+ PD  +Y TII  LC   ++ +A   
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSL 552

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  ML+K + P    +NV+++G+   G +     + + ML   +  N  T+N+L+     
Sbjct: 553 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCI 612

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
             ++     + K ML   + P+  TYN+LI   C   ++  AL  + EM+ +G      +
Sbjct: 613 EKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASS 672

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  LI+    +    EA  +F K++
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMR 697



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 188/398 (47%), Gaps = 5/398 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE +   + +VI  LC  G++  A+ +   M+  G V D      +++  C+ GDL  A 
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           +   EM +   + +  TY A I G CR  EL +A  +   M + G+  + VT+ +L+   
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G + +A     +++     + T +V+T T L D   K GD   A  L ++M  K ++
Sbjct: 436 CKVGKMTEAFLVHNKMV---QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +I  YN LING C  G++  A      M + G  PDV TY T++  LC+  +LD A   
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSL 552

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+ P  ++Y  ++ G C+ G +   +  L  MLEK++ P    +N ++  Y  
Sbjct: 553 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCI 612

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             ++ +   I   MLS  V  N  T+N LI    +  ++ +A     EM+  G      +
Sbjct: 613 EKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASS 672

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGIT--PDIITY 509
           YN LI           A +L+++M +  +T  PD+  +
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNF 710



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 182/375 (48%), Gaps = 3/375 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+   C  G +  A     +M ++G   D +T+  L+N LC+ G+L++A+ V++EM +  
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TY   I GYC+V ++ +A  + + M    + PN VT+  L   LCK+G +  A 
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E+ +        ++ T   L++   K G+  QA+    DM +  ++ D+  Y  +I
Sbjct: 481 ELLHEMCSKG---LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
              C + ++  A +   +ML +G  P ++TYN L+N  C  G+++        + +  + 
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+  +Y ++++  CI  ++    E    ML + VVP  + +N++I G+ +  ++  A   
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYF 657

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+  G      ++NALI    +     +A  L ++M  + +  +   YN  I  S N
Sbjct: 658 HSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFN 717

Query: 484 LGHIHLALQLYDEML 498
             ++   L L DE++
Sbjct: 718 EDNLESTLALCDELV 732


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 206/428 (48%), Gaps = 3/428 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   + AV++ LC+  + G    L  +M++    P+++T N L+  LC+ G  E+   
Sbjct: 213 EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHE 272

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+ +MSE   +P+   Y   I G C+   L+ A  + + M + G++PN V +N ++  LC
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
                 +A + L E+   D      D +T  IL+D + +NG   + + L   M       
Sbjct: 333 SAERWKEAEELLSEMFQKD---CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D++ Y  +INGFC  G I  A      M   G  P+ ++Y  +L  LC  G+  +A    
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + + G  P+ +++ T+I  LC  G + +A E L  ML     P+   ++ +IDG G+ 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G    A  + ++M++ G+S N   ++++  A +R G +     +   +    I  D   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N +I + C       A+  +  M+  G  P+  TYT LIKG  + G  KEA+E+ +++ +
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629

Query: 535 LGLAIDHI 542
            G    H+
Sbjct: 630 RGALRKHL 637



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 197/443 (44%), Gaps = 6/443 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           HV ++   C  G    ++ +   M  KG   D    N ++N +C+ G +++A  ++R+++
Sbjct: 150 HV-ILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                 +  +YNA + G C          L   M      PN VT N L+  LC+ GL  
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLF- 267

Query: 241 DAVKFLGEVLAD-DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
              + + EVLA   +   T D+     ++D   K G    A  + N M    ++ ++V Y
Sbjct: 268 ---ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N ++ G C       A     +M ++    D +T+N L++  C+ G +D        +  
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G  PD I+Y T+I G C  G I +A   L SM      P    + +++ G    G   +
Sbjct: 385 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD 444

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +   M+  G   N  TFN LI    + G +  A  L K+ML++G  PD+ +Y+ +I 
Sbjct: 445 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 504

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                G    AL+L + M+ +GI+P+ I Y+ +       G + +  ++F  I+   +  
Sbjct: 505 GLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRS 564

Query: 540 DHIPFRILKKRYRRMKESDKARD 562
           D + +  +     +  E+D+A D
Sbjct: 565 DAVLYNAVISSLCKRWETDRAID 587



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 196/413 (47%), Gaps = 3/413 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+  T   +V  LC  G +  A  V+ EMS    +P    Y+  +   CR      ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   G   +    N++++A+C++G + +AV  L + LA    +A  D+++   ++  
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRK-LAFFGCEA--DIVSYNAVLKG 225

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                       L ++M + +   +IV +N LI   C NG          QM + G  PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           +  Y T+++ +CK+G L+ A+     +   G+ P+ + Y T+++GLC      +A E L 
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M +K    +   +N+++D + + G +     + + MLS G   +V T+  +I    + G
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            I +A  L K M   G  P+  +Y +++   C+ G    A +L  +M+++G  P+ +T+ 
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            LI   C +G +++A E+  ++   G + D I +  +     +  ++++A ++
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL 518



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 165/360 (45%), Gaps = 6/360 (1%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            YNA + GYCR  +L  A  L + +    + PN  T   +V  LC +G + DA++ L E+
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
                G A    +   IL ++  ++G    ++ +   M  K    D    N+++N  C  
Sbjct: 138 --SFKGCAPIPPMYHVIL-EAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G +  A     ++   G   D+++YN +L  LC   +  +       + +   AP+ +++
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            T+I  LC +G   +  E L  M E    P+  ++  IIDG  + G L  A  I + M S
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
           +G+  NV  +N ++          +A  L  EM       D  T+N+L+   C  G +  
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
            ++L ++ML  G  PD+ITYT +I G C  G + EA  +   + + G   + + + I+ K
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 87/217 (40%), Gaps = 38/217 (17%)

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+ YN ++   C+ G+L  A      +    V P+  ++  +++GLC  G I  A E L 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M  K   P P +++VI++   R G   N+  + + M + G +                 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTL---------------- 179

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
                              D    NL++ A C  G +  A+ L  ++   G   DI++Y 
Sbjct: 180 -------------------DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYN 220

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            ++KG C      + EE+  ++  +  A + + F  L
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 218/469 (46%), Gaps = 65/469 (13%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM--- 179
            +I   C  GK   A  L  KM + G VP V T N  ++ LC  G + +A  + R+M   
Sbjct: 222 TLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQID 281

Query: 180 SEMR-PSPNCATYNAFITGYCRVNELDKALHLFSTMANN--------------------- 217
            E+  P PN  TY   + G+C+   L++A  L  TM  N                     
Sbjct: 282 EELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGK 341

Query: 218 --------------GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
                         GI P+  ++NI++  LCK G+L DA   +G ++ +       D +T
Sbjct: 342 LLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNG---ILPDTVT 398

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            + L+  Y   G  F+A  L ++M   N   +    NVL++     G IS A     +M 
Sbjct: 399 YSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMN 458

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEA-------------------SHFYGVLSKT---- 360
           ++G+  D +T N ++N LC  G+LD+A                   + F G++  T    
Sbjct: 459 EKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGK 518

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
              PD ++Y TII GLC  G +  A++  + M+ K + P+  I++  I  + R G +S+A
Sbjct: 519 KCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSA 578

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           F +   M   G +  + T+N+LIL       IF+ + L  EM   G+ PDV TYN ++  
Sbjct: 579 FQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNC 638

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            C  G I+ A  + DEML++GI+P+I ++  LIK  C   + K + EVF
Sbjct: 639 LCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVF 687



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 191/457 (41%), Gaps = 59/457 (12%)

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
           WL + M+     P+  T N L+  LC  G LE A  +  +M      PN  T+   + GY
Sbjct: 133 WLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGY 192

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL------------ 246
           CR     K L L   M   GI PN V +N L+ + CK+G   DA K +            
Sbjct: 193 CRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHV 252

Query: 247 -------------GEVLA-----------DDDGKATSDVITSTILMDSYFKNGDKFQALA 282
                        G++L            ++ G    +VIT  +++  + K G   +A  
Sbjct: 253 ETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKT 312

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           L + M +     ++ +YN+ + G   NG +  A+    +ML  G  PD+ +YN +++ LC
Sbjct: 313 LVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLC 372

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K G L +A    G++ + G+ PD ++Y T++ G C  G + +A   L  M+  +  P  +
Sbjct: 373 KNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTY 432

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
             NV++    + G +S A ++   M   G   +  T N +I A    G +  A  +   M
Sbjct: 433 TCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGM 492

Query: 463 LLDG-----------------------IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
              G                         PD+ TY+ +I   C  G +  A + + EM+ 
Sbjct: 493 WTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMS 552

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +G+ PD   Y   I   C  G +  A +V   ++  G
Sbjct: 553 KGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRG 589



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 182/392 (46%), Gaps = 7/392 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P +  +N L+    +   +E    + ++M   R SP   T+N  I   C    L+ A  L
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M   G  PN  T  ILV   C+ GL    ++ LG++     G   ++V+ +T L+ S
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTM--GILPNNVLYNT-LISS 226

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL-- 328
           + K G    A  L + M +  +   +  +N  I+  C +G I  A   F  M     L  
Sbjct: 227 FCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGL 286

Query: 329 --PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+VITY  +L   CK+G L+EA      + +     +  SY   + GL  +G +++A 
Sbjct: 287 PHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAW 346

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             L  ML   + P+ + +N+++DG  + G LS+A  +  LM+  G+  +  T++ L+   
Sbjct: 347 IVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGY 406

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G +F+A +L  EM+ +   P+ +T N+L+ +    G I  A  L  +M  +G   D 
Sbjct: 407 CSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDT 466

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
           +T   +I   C  G + +A E+   + T G A
Sbjct: 467 VTCNIIINALCNNGQLDKAIEIVNGMWTHGSA 498



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 184/411 (44%), Gaps = 9/411 (2%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPS--PNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           LV  L K G   KA    + +    P   P+   YN  +    R N ++    L+  M  
Sbjct: 81  LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVL 140

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
             + P   T N+L+  LC  G L DA +   ++ A        +  T  IL+  Y + G 
Sbjct: 141 ARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARG---CEPNEFTFGILVRGYCRAGL 197

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             + L L   M    I  + V YN LI+ FC  G    A     +M + G +P V T+N+
Sbjct: 198 ASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNS 257

Query: 337 LLNCLCKQGKLDEASHFY---GVLSKTGVA-PDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            ++ LC  GK+ EAS  +    +  + G+  P+ I+YK ++ G C  G + +A+  + +M
Sbjct: 258 RISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTM 317

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
              +       +N+ + G  R G L  A+ +   ML  G+  +++++N ++    + G +
Sbjct: 318 KRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGML 377

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            DA  L   M+ +GI PD  TY+ L+   C+ G +  A  L  EM+    +P+  T   L
Sbjct: 378 SDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVL 437

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           +      G + EAE +  K+   G  +D +   I+        + DKA +I
Sbjct: 438 LHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEI 488



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 200/446 (44%), Gaps = 27/446 (6%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  V+  LC  G +  A  L   MI+ G +PD +T++ L++  C  G + +A+
Sbjct: 357 IEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEAN 416

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           +++ EM     SPN  T N  +    +   + +A +L   M   G   + VT NI+++AL
Sbjct: 417 NLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINAL 476

Query: 234 CKKGLLGDAVKF-----------LGEV------LADD---DGKATSDVITSTILMDSYFK 273
           C  G L  A++            LG +      L DD     K T D++T + ++    K
Sbjct: 477 CNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCK 536

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G    A   + +M  K +Q D   Y+  I+ FC  G ISSAF     M KRG    + T
Sbjct: 537 AGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQT 596

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN+L+  L  + ++ E       + + GV+PD  +Y  ++  LC  G I  A   L  ML
Sbjct: 597 YNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEML 656

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF-GVSSNVFT--FNALILAETRGG 450
           +K + P    + ++I  + +  D   +  + ++ L+  G    ++T  FN L++    GG
Sbjct: 657 QKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLV----GG 712

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A  L +  L        F Y  LI   C    +  A  +   ++ +G   D  ++ 
Sbjct: 713 KVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFM 772

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLG 536
            +I G    GN   A+E+  ++  + 
Sbjct: 773 PVIDGFGKMGNKHVADELAERMMEMA 798



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 74/132 (56%)

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +++ +N L+ +  R   +     L K+M+L  + P+ +T+NLLIG  C+ GH+  A +L+
Sbjct: 111 SIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELF 170

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           D+M  RG  P+  T+  L++G+C  G   +  E+  +++T+G+  +++ +  L   + + 
Sbjct: 171 DKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKE 230

Query: 555 KESDKARDIHQK 566
            ++  A  +  K
Sbjct: 231 GKTHDAEKLVDK 242


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 216/428 (50%), Gaps = 12/428 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++G A+    +M+++  VP++   N L+  LC+ G +++A  + R +   +
Sbjct: 9   LIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGI---Q 65

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDA 242
            SP+  T N  I G+C +  LDKAL LF  M  N  + P   T+  ++   CK   L  A
Sbjct: 66  CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQA 125

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNV 301
            + L     ++    +SDVI  T +   + K     +A  L  DM +K + + DIVA+NV
Sbjct: 126 RQLL-----EESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +I+GFC  G +  A+     ++  G +P+ +TY TL++  CK G L EA   + VLS   
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240

Query: 362 --VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
               P+ +++  +I GLC    +  A E +  M  + +  +   +  ++DG  + G  S 
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
              + + ML  G + +V T+  L+ A  + GS+ DA  + + M+  GI PDV TY +L+ 
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                G +  A + ++++LR    P  + Y+ L++G C    + EA + + ++    LA 
Sbjct: 361 GLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAP 420

Query: 540 DHIPFRIL 547
           D    ++L
Sbjct: 421 DPATCKLL 428



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 177/369 (47%), Gaps = 18/369 (4%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           PN  T++  I G C+   L +A+  ++ M      PN    N+L+ +LC+ G +  A+  
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN--IQTDIVAYNVLI 303
              +      + +  VIT  IL++ + +     +AL L+++M +KN  +  +   Y  +I
Sbjct: 61  FRGI------QCSPSVITLNILINGFCELQLLDKALELFHEM-EKNFALVPEATTYTAII 113

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFL--PDVITYNTLLNCLCKQGKLDEASH-FYGVLSKT 360
             +C    +  A     Q+L+       DVI   ++    CK  ++DEA      ++ K 
Sbjct: 114 KCYCKMDRLDQAR----QLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKK 169

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
              PD +++  II G C  G + +A E L +++    VP    +  +IDG+ + G+LS A
Sbjct: 170 SAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEA 229

Query: 421 FSIRDLMLS--FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
             +  ++ S       NV TFNALI    +   +  AF L K+M    +  D FTY  L+
Sbjct: 230 LQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLM 289

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G      ++++EMLR G  P ++TYT L+  HC  G++++A++V   +   G+ 
Sbjct: 290 DGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIP 349

Query: 539 IDHIPFRIL 547
            D   + +L
Sbjct: 350 PDVTTYTVL 358



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 176/400 (44%), Gaps = 43/400 (10%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE-M 182
           ++  LC  G +  A+ + R +      P V+T N L+N  C++  L+KA  +  EM +  
Sbjct: 44  LLASLCQAGTMDQAMAIFRGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNF 100

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFST----------------------------- 213
              P   TY A I  YC+++ LD+A  L                                
Sbjct: 101 ALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQ 160

Query: 214 -----MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
                +     +P+ V  N+++H  CK G + +A + L  +++        + +T T L+
Sbjct: 161 LLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVS---MGCVPNAVTYTTLI 217

Query: 269 DSYFKNGDKFQALALWNDMFQKN--IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           D + K+G+  +AL L+  +  ++   + ++V +N LI+G C    +  AF    QM  R 
Sbjct: 218 DGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARD 277

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
              D  TY TL++ LCKQG+  E S  +  + + G  P  ++Y T++   C  G +  A+
Sbjct: 278 LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQ 337

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + + SM+ K + P+   + V+++G    G +  A    + +L          ++AL+   
Sbjct: 338 QVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGC 397

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
            +   + +A     EML   + PD  T  LL+   C  G 
Sbjct: 398 CKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 40/262 (15%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS--E 181
           +I   C  G++  A  +   ++  G VP+ +T+  L++  CK G+L +A  + + +S  +
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHL------------------------------- 210
               PN  T+NA I+G C+ + L+ A  L                               
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300

Query: 211 ----FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
               F  M   G  P+ VT+  LVHA CK G L DA + +  ++A        DV T T+
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKG---IPPDVTTYTV 357

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L++  F+NG    A   +  + ++      V Y+ L+ G C    +  A  Y+ +ML R 
Sbjct: 358 LLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRR 417

Query: 327 FLPDVITYNTLLNCLCKQGKLD 348
             PD  T   L+  LCK+G+ D
Sbjct: 418 LAPDPATCKLLVEMLCKRGRTD 439



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 3/162 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  ++  LC  G+      +  +M+++G  P V+T+  LV+  CK G L+ A 
Sbjct: 278 LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQ 337

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            VIR M      P+  TY   + G     ++  A   F  +      P  V ++ LV   
Sbjct: 338 QVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGC 397

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           CK  L+ +AVK+  E+L   D +   D  T  +L++   K G
Sbjct: 398 CKAALVDEAVKYYVEML---DRRLAPDPATCKLLVEMLCKRG 436


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/501 (29%), Positives = 233/501 (46%), Gaps = 17/501 (3%)

Query: 52  TLNDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAVFNAL---DLILKENLDR----LKTM 104
           T N+I+  +    R    + F  K    + +P  +  ++    LI  E +D     LK M
Sbjct: 293 TYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEM 352

Query: 105 RDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC 164
            + G V    E  Y     +I   C  G I  AL +R  M+ KG  P+ +T N L+   C
Sbjct: 353 SELGFV--PNEVVYN---TLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFC 407

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           K   + +A++V+ EM       N  +++  I   C       ALH    M    +RPN  
Sbjct: 408 KSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDG 467

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALAL 283
               LV  LCK G  G+AV+    +L    GK    +++TS  L+    K G+  + L L
Sbjct: 468 LLTTLVSGLCKAGKQGEAVELWCRLL----GKGFVPNIVTSNALIHGLCKAGNMQETLKL 523

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
             DM ++ +  D + YN LI+G C  G +   F    +M+K+G  PD+ T+N LL+ LC 
Sbjct: 524 LRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCN 583

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
             K+DEAS  +    K G  P+  +Y  +I G C    + +    L  ++ K +     +
Sbjct: 584 ADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVV 643

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N +I  Y   G+++ AF +RD M S GV  +  T+++L+      G + DA  L  EM 
Sbjct: 644 YNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMR 703

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
            +G+ P+V  Y  +IG    LG ++    +  EM    I P+  TYT +I G C  G  K
Sbjct: 704 KEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTK 763

Query: 524 EAEEVFAKIQTLGLAIDHIPF 544
           EA ++  ++   G+  D + +
Sbjct: 764 EAAKLLNEMTEKGILPDAVTY 784



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 229/477 (48%), Gaps = 42/477 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++  A   + KM+++   P ++T++  +N L K+  +++A+ V++EMSE+ 
Sbjct: 297 IIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELG 356

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN   YN  I GYC++  + +AL +   M + GI PN VT N L+   CK   +G A 
Sbjct: 357 FVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAE 416

Query: 244 KFLGEVLAD--DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
             L E++       + +  ++ + + +   F       AL    +M  +N++ +      
Sbjct: 417 NVLEEMIGRGLPINQGSFSMVINWLCLKFRF-----VTALHFIREMLLRNLRPNDGLLTT 471

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L++G C  G    A   +C++L +GF+P+++T N L++ LCK G + E       + + G
Sbjct: 472 LVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERG 531

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV------------------------ 397
           +  D+I+Y T+I G C  G + +  E    M++K +                        
Sbjct: 532 LVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEAS 591

Query: 398 -----------VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
                      VP  + + V+IDGY +   +    ++ + ++S  +  N   +N+LI A 
Sbjct: 592 RLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAY 651

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G++  AF L+ +M   G+     TY+ L+   CN+G +  A  L DEM + G+ P++
Sbjct: 652 CINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNV 711

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           + YT +I G+   G M +   V  ++ +  +  +   + I+   + ++ ++ +A  +
Sbjct: 712 VCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKL 768



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 209/420 (49%), Gaps = 3/420 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           + +KG  P + T  +L++ L K  +L+K+  V   +      P+   ++  I  +C+ + 
Sbjct: 212 LAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHR 271

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            D A+ LFS M   G+ PN VT+N ++H LCK G L +A +F  +++ +   K +  +IT
Sbjct: 272 EDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKE---KVSPSLIT 328

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            ++ ++   K     +A  +  +M +     + V YN LI+G+C  G+IS A      ML
Sbjct: 329 YSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDML 388

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            +G  P+ +T N+L+   CK  ++ +A +    +   G+  +Q S+  +I  LC+    V
Sbjct: 389 SKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFV 448

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A  F+  ML +++ P   +   ++ G  + G    A  +   +L  G   N+ T NALI
Sbjct: 449 TALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALI 508

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G++ +   L ++ML  G+  D  TYN LI   C  G +    +L +EM+++GI 
Sbjct: 509 HGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQ 568

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PDI T+  L+ G C    + EA  ++ + +  G   +   + ++   Y +  + ++  ++
Sbjct: 569 PDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENL 628



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 204/425 (48%), Gaps = 3/425 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I+  C   +IG A  +  +MI +G   +  + + ++N LC       A H IREM   
Sbjct: 401 SLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLR 460

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN       ++G C+  +  +A+ L+  +   G  PN VT N L+H LCK G + + 
Sbjct: 461 NLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQET 520

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K L ++L   +     D IT   L+    K G   +   L  +M +K IQ DI  +N+L
Sbjct: 521 LKLLRDML---ERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLL 577

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G C    I  A   + +  K G++P+V TY  +++  CK  K++E  +    L    +
Sbjct: 578 LHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKL 637

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             + + Y ++I+  CI+G++  A      M  + V+     ++ ++ G    G + +A  
Sbjct: 638 ELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKH 697

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M   G+  NV  +  +I   ++ G +     + +EM    I P+ FTY ++I   C
Sbjct: 698 LLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFC 757

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            LG    A +L +EM  +GI PD +TY     G C  G ++EA +V  ++ +  + +D I
Sbjct: 758 KLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEI 817

Query: 543 PFRIL 547
            +  L
Sbjct: 818 TYTTL 822



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 180/356 (50%), Gaps = 3/356 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC  GK G A+ L  +++ KG VP+++T N L++ LCK G++++   ++R+M E 
Sbjct: 471 TLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLER 530

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +  TYN  I+G C+  ++ +   L   M   GI+P+  T N+L+H LC    + +A
Sbjct: 531 GLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEA 590

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +   E   +       +V T  +++D Y K     +   L N++  K ++ + V YN L
Sbjct: 591 SRLWHECKKNG---YVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSL 647

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I  +C+NG++++AF     M  RG L    TY++L++ LC  G +D+A H    + K G+
Sbjct: 648 IRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGL 707

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ + Y TII G    G + K    L  M   ++ P    + ++IDG+ + G    A  
Sbjct: 708 LPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAK 767

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           + + M   G+  +  T+NA      + G + +AF +  EM    +  D  TY  LI
Sbjct: 768 LLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 142/317 (44%), Gaps = 43/317 (13%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E L  L+ M + G     L  D   +  +I   C  GK+     L+ +M++KG  PD+
Sbjct: 517 MQETLKLLRDMLERG-----LVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDI 571

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T N L++ LC    +++A  +  E  +    PN  TY   I GYC+ N++++  +L + 
Sbjct: 572 YTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNE 631

Query: 214 MANNGIRPNRVTHNILV-----------------------------------HALCKKGL 238
           + +  +  N V +N L+                                   H LC  GL
Sbjct: 632 LVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGL 691

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           + DA   L E+  +       +V+  T ++  Y K G   +   +  +M   NI  +   
Sbjct: 692 VDDAKHLLDEMRKEG---LLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFT 748

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y ++I+GFC  G    A     +M ++G LPD +TYN   N LCK+GK++EA      +S
Sbjct: 749 YTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMS 808

Query: 359 KTGVAPDQISYKTIIQG 375
              V  D+I+Y T+I G
Sbjct: 809 SGAVCLDEITYTTLIDG 825



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 117/244 (47%), Gaps = 8/244 (3%)

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           GF    D+ S  A      K+G  P + T   LL+ L K  +L ++   Y  +   G+ P
Sbjct: 201 GFGFAADVFSLLA------KKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIP 254

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           D   + T+I   C  G        L S +EK  V P    +N II G  + G L  A+  
Sbjct: 255 DVHLFSTMINAFC-KGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRF 313

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
           ++ M+   VS ++ T++  I    +   I +A  + KEM   G  P+   YN LI   C 
Sbjct: 314 KEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCK 373

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           +G+I  AL++ D+ML +GI+P+ +T   LI+G C    + +AE V  ++   GL I+   
Sbjct: 374 MGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGS 433

Query: 544 FRIL 547
           F ++
Sbjct: 434 FSMV 437



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 110/221 (49%)

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A+  + +L+K G+ P   +   ++  L    ++ K+ E    +    ++P+ H+++ +I+
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
            + +     +A  +   M   GV+ NV T+N +I    + G + +A+  K++M+ + + P
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            + TY++ I     L  I  A  +  EM   G  P+ + Y  LI G+C  GN+ EA ++ 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
             + + G++ + +    L + + +  +  +A ++ ++ + R
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGR 425


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 212/402 (52%), Gaps = 5/402 (1%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T L L +KM  +G  P+ +  N L+N  C++G +  A  V+ ++ +M   P+  T N FI
Sbjct: 88  TVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFI 147

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G+C   ++ +AL+    +   G   ++V++  L++ LCK G    A++ L  V    DG
Sbjct: 148 KGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRV----DG 203

Query: 256 KATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           K    DV+  + ++DS  K+ +   A  L+++M  + I ++IV Y+ LI+GFC+ G +  
Sbjct: 204 KLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKD 263

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A   F +M      PDV T+N L++  CK+G++ EA +   ++ K G+ PD ++Y +++ 
Sbjct: 264 AIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMD 323

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C+  ++  A+  L +M  + V      +N++I+G+ +   +  A  +   M    +  
Sbjct: 324 GYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFP 383

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           NV T+N+LI    + G I  A  L   M   G  PD+ TY+ ++ A C    +  A+ L 
Sbjct: 384 NVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALL 443

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            ++  +GI P++ TYT LI G C  G +++A  +F  +   G
Sbjct: 444 IKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKG 485



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 200/393 (50%), Gaps = 3/393 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  LC  G+   AL L R++  K    DV+ ++ +++ +CK  ++  A  + 
Sbjct: 174 DQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLY 233

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM   R S N  TY+A I+G+C V +L  A+ LF+ M +  I P+  T NILV A CK+
Sbjct: 234 SEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKE 293

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A   L  ++         D++T   LMD Y    +   A ++ N M  + +   +
Sbjct: 294 GRVKEAKNGLAMMMKQG---IKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATV 350

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
            +YN++INGFC    +  A   F +M  +   P+VITYN+L++ LCK G++  A     +
Sbjct: 351 RSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDL 410

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G  PD I+Y +I+  LC +  + KA   L+ + ++ + P  + + ++IDG  + G 
Sbjct: 411 MHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGR 470

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L +A +I + +L  G +  V T+  +I      G   +A SL  +M  +   PD  TY +
Sbjct: 471 LEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEI 530

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           +I +  +      A +L  EM+ RG+    + Y
Sbjct: 531 IICSLFDKDENDKAEKLLREMITRGLLYSFLEY 563



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 205/413 (49%), Gaps = 3/413 (0%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I+  CL G+I  AL    K++  G   D +++  L+N LCK+G+   A  ++R +     
Sbjct: 147 IKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLV 206

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
             +   Y+  I   C+   ++ A  L+S M +  I  N VT++ L+   C  G L DA+ 
Sbjct: 207 QLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIG 266

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              ++ +++      DV T  IL+D++ K G   +A      M ++ I+ DIV YN L++
Sbjct: 267 LFNKMTSEN---INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMD 323

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G+CL  +++ A +    M  RG    V +YN ++N  CK   +D+A   +  +    + P
Sbjct: 324 GYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFP 383

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           + I+Y ++I GLC  G I  A E +  M ++   P+   ++ I+D   +   +  A ++ 
Sbjct: 384 NVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALL 443

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
             +   G+  N++T+  LI    +GG + DA ++ +++L+ G    V TY ++I   C+ 
Sbjct: 444 IKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSH 503

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           G    AL L  +M      PD ITY  +I     +    +AE++  ++ T GL
Sbjct: 504 GLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGL 556



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 205/454 (45%), Gaps = 38/454 (8%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMS------EMRPSPNCATYNAFITGYCRVNELDKAL 208
           TH Y ++           + V+  +S         P+P    +   +    +       L
Sbjct: 31  THFYFIHSFSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVL 90

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA---DDDGKATS------ 259
            LF  M   GI+PN V  NIL++  C+ GL+  A   L ++L    + D    +      
Sbjct: 91  SLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGF 150

Query: 260 -----------------------DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
                                  D ++   L++   K G+   AL L   +  K +Q D+
Sbjct: 151 CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDV 210

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y+ +I+  C + +++ AF  + +M+ R    +++TY+ L++  C  GKL +A   +  
Sbjct: 211 VMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNK 270

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           ++   + PD  ++  ++   C  G + +A+  L  M+++ + P+   +N ++DGY    +
Sbjct: 271 MTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNE 330

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           ++ A SI + M   GV++ V ++N +I    +   +  A  L KEM    IFP+V TYN 
Sbjct: 331 VNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNS 390

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C  G I  AL+L D M  RG  PDIITY+ ++   C    + +A  +  K++  G
Sbjct: 391 LIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQG 450

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +  +   + IL     +    + AR+I +  L++
Sbjct: 451 IRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVK 484



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 166/309 (53%), Gaps = 4/309 (1%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           ++ S  K+      L+L+  M  + I+ + V +N+LIN FC  G I  AF+   ++LK G
Sbjct: 76  ILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMG 135

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           + PD IT NT +   C +G++ +A +F+  L   G   DQ+SY T+I GLC  G+   A 
Sbjct: 136 YEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAAL 195

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E L  +  K V  +  +++ IID   +  ++++AF +   M+S  +SSN+ T++ALI   
Sbjct: 196 ELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGF 255

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + DA  L  +M  + I PDV+T+N+L+ A C  G +  A      M+++GI PDI
Sbjct: 256 CIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDI 315

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RD 562
           +TY  L+ G+C    +  A+ +   +   G+      + I+   + ++K  D+A    ++
Sbjct: 316 VTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKE 375

Query: 563 IHQKWLLRN 571
           +H K +  N
Sbjct: 376 MHHKQIFPN 384



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 135/281 (48%), Gaps = 9/281 (3%)

Query: 74  NKDSDNEGNPQA-VFNAL-DLILKENLDRLKTMRD--TGPVRCTLETDYRRHVAVIRDLC 129
           NK +    NP    FN L D   KE   R+K  ++     ++  ++ D   + +++   C
Sbjct: 269 NKMTSENINPDVYTFNILVDAFCKEG--RVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYC 326

Query: 130 LGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCA 189
           L  ++  A  +   M  +G    V ++N ++N  CKI  +++A  + +EM   +  PN  
Sbjct: 327 LVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVI 386

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           TYN+ I G C+   +  AL L   M + G +P+ +T++ ++ ALCK  L+  A+  L ++
Sbjct: 387 TYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKL 446

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
               D     ++ T TIL+D   K G    A  ++ D+  K     +  Y V+I GFC +
Sbjct: 447 ---KDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSH 503

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
           G    A +   +M     +PD ITY  ++  L  + + D+A
Sbjct: 504 GLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKA 544



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 115/292 (39%), Gaps = 48/292 (16%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC  G+I  AL L   M  +G  PD++T++ +++ LCK   ++KA  ++ ++ + 
Sbjct: 390 SLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQ 449

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY   I G C+   L+ A ++F  +   G      T+ +++   C  GL  +A
Sbjct: 450 GIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEA 509

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  L ++    D     D IT  I++ S F   +  +A  L  +M  + +    + Y   
Sbjct: 510 LSLLSKM---KDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSW 566

Query: 303 INGF--------------CLNGDISSAFAYF----------------------------- 319
              F              C +   S  +A                               
Sbjct: 567 SLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIY 626

Query: 320 --CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
             C   K+G++ DV TY  ++   C  G  DE+      +   G  PD ++Y
Sbjct: 627 STCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTY 678


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 222/453 (49%), Gaps = 16/453 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS-EM 182
           V++ L   G +  AL +   M  +  VP ++T+N L+N  C  G+  KA  + + M  E 
Sbjct: 16  VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R  P+  TYN  I+G C     + A  L S M +  I  N  T++ ++ +L K+    ++
Sbjct: 76  RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEES 135

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K L E++A        DV     +M  + ++ +  +A  ++  M +   + D V+Y++L
Sbjct: 136 YKVLEEMMA---AGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192

Query: 303 INGFCLNGDISSAFAYFCQMLKR--GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           I+G    G +  +     +M  R  G++P+VIT++TL++ LC+ G+L++A   +G + + 
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 252

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  P++ +Y T+I GLC    +++ARE    M +  + P+   +N +I GY + G +  A
Sbjct: 253 GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEA 312

Query: 421 FSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
             + R++    G+   + TFN LI    + G +  A  L  EM   G+  D  TY +LI 
Sbjct: 313 EKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIA 372

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                  +  AL++Y +M  +    D ++    + G C  GN+ +A  VF   +  G   
Sbjct: 373 GLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVP 432

Query: 540 DHIPFRILKKRY---------RRMKESDKARDI 563
           +   FRIL +           +++ E  KARDI
Sbjct: 433 NPETFRILSESLIKLGRVEDAQKLMEPAKARDI 465



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 178/416 (42%), Gaps = 42/416 (10%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
            ++++V  L K G L +A  V   M      P+  TYN  I   C   E  KAL LF +M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 215 ANNG-IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
                + P+R T+N L+  LC  G    A K L E                         
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSE------------------------- 106

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                        M  KNI  ++  Y+ +I           ++    +M+  G  PDV  
Sbjct: 107 -------------MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFA 153

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL--LS 391
           +N ++    +   +++A   Y  + ++G  PD +SY  +I GL   G + ++ + L  ++
Sbjct: 154 FNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMA 213

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M     VP    ++ +I G  R G+L  A  +   ML  G   N +T+  LI    R   
Sbjct: 214 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEK 273

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR-RGITPDIITYT 510
           +  A  L ++M    I PD   YN LI   C  G +  A +LY EM    G+ P I+T+ 
Sbjct: 274 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 333

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            LI G C  G +  A E+ A++ T GLA D   +RIL     R  + D+A +++++
Sbjct: 334 TLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQ 389



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 189/407 (46%), Gaps = 6/407 (1%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           LD  ++M+    V    E D   +  +I  LC  G    A  L  +M  K    +V T++
Sbjct: 65  LDLFQSMKREKRV----EPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            ++  L K    E++  V+ EM     +P+   +N  + G+ R N ++KA  ++  M  +
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G +P+ V+++IL+H L K G L +++K L E+     G    +VIT + L+    + G+ 
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGY-VPNVITFSTLIHGLCRTGEL 239

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +AL ++  M +   + +   Y  LI G C    +  A   F +M +    PD + YN+L
Sbjct: 240 EKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSL 299

Query: 338 LNCLCKQGKLDEASHFYGVLS-KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           +   CK+G +DEA   Y  +S   G+ P  +++ T+I G C  G + +A E +  M  K 
Sbjct: 300 IAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKG 359

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           +  +   + ++I G  R   L  A  +   M       +  +  + +    + G+I  A+
Sbjct: 360 LAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAY 419

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
           ++ +     G  P+  T+ +L  +   LG +  A +L +    R IT
Sbjct: 420 AVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDIT 466



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 1/215 (0%)

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +SK   A    +Y  ++Q L   G + +A E   +M  +S VP    +NV+I+     G+
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 417 LSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
              A  + + +     V  + +T+N LI      G+   A  L  EM    I  +VFTY+
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            +I +         + ++ +EM+  G  PD+  +  +++G     NM++A EV+  +   
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           G   D++ + IL     ++ + D++  I  +  +R
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMR 215


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 204/416 (49%), Gaps = 3/416 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD  ++N ++  L + G    A  V  EM +M   PN  TYN  I G+ +  +L+    L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M ++G +PN VT+N+L+  LC+ G + +    + E+ +        D  T +IL D 
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASH---SMFPDGFTYSILFDG 130

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             + G+    L+L+ +  +K +       ++L+NG C +G ++ A      ++  G +P 
Sbjct: 131 LTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 190

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            + YNTL+N  C+   L  A   +  +    + PD I+Y  +I GLC    + KA + ++
Sbjct: 191 TVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVM 250

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M +  V P    +N +ID YG  G L   F++   M   G+ S+V +F +++ A  + G
Sbjct: 251 EMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNG 310

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            I +A ++  +M+   + P+   YN +I A    G    A  L ++M   G++  I+TY 
Sbjct: 311 KIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYN 370

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            L+KG C    + EAEE+   ++  GL  D + +  +        ++DKA ++ Q+
Sbjct: 371 LLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 426



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 216/478 (45%), Gaps = 38/478 (7%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  L   GK   AL +  +M+  G VP+ +T+N +++   K GDLE    +  +M    
Sbjct: 22  VIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDG 81

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P PN  TYN  ++G CR   +D+   L   MA++ + P+  T++IL   L + G     +
Sbjct: 82  PKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTML 141

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E L            T +IL++   K+G   +A  +   +    +    V YN LI
Sbjct: 142 SLFAESLKKG---VMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 198

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG+C   D+  AF  F QM  R   PD ITYN L+N LCK   + +A      + K+GV 
Sbjct: 199 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 258

Query: 364 P-----------------------------------DQISYKTIIQGLCIHGDIVKAREF 388
           P                                   D IS+ ++++  C +G I +A   
Sbjct: 259 PSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAI 318

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  M+ K V P   ++N IID Y   GD   AF + + M + GVS+++ T+N L+    R
Sbjct: 319 LDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCR 378

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
              I +A  L   +   G+ PDV +YN +I A CN G    AL+L  EM + GI P + T
Sbjct: 379 SSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT 438

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           Y  L+    + G + + E ++ ++    +      + I+   Y R +   K   + ++
Sbjct: 439 YHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKE 496



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 179/374 (47%), Gaps = 3/374 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+  T L L  + ++KG +    T + L+N LCK G + KA+ V+  +      P    Y
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 194

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYC+V +L  A  +F  M +  IRP+ +T+N L++ LCK  ++  A   + E+  
Sbjct: 195 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM-- 252

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            +       V T   L+D+Y   G   +   + +DM QK I++D++++  ++  FC NG 
Sbjct: 253 -EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 311

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I  A A    M+ +   P+   YN++++   + G  ++A      +  +GV+   ++Y  
Sbjct: 312 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNL 371

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +++GLC    I +A E + ++  + + P+   +N II      GD   A  +   M  +G
Sbjct: 372 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 431

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +   + T++ L+ A    G + D   L ++ML   + P    Y +++ A     +     
Sbjct: 432 IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVA 491

Query: 492 QLYDEMLRRGITPD 505
            L  EM  +GI  D
Sbjct: 492 SLKKEMSEKGIAFD 505



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 141/311 (45%), Gaps = 35/311 (11%)

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +   +G    D  +  +++   +++G    AL ++++M    +  + + YN +I+G    
Sbjct: 5   MGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKG 64

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           GD+ + F    QML  G  P+++TYN LL+ LC+ G++DE       ++   + PD  +Y
Sbjct: 65  GDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTY 124

Query: 370 -----------------------------------KTIIQGLCIHGDIVKAREFLLSMLE 394
                                                ++ GLC  G + KA + L  ++ 
Sbjct: 125 SILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVH 184

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             +VP   I+N +I+GY +  DL  AF I + M S  +  +  T+NALI    +   +  
Sbjct: 185 TGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTK 244

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L  EM   G+ P V T+N LI A    G +     +  +M ++GI  D+I++  ++K
Sbjct: 245 AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVK 304

Query: 515 GHCARGNMKEA 525
             C  G + EA
Sbjct: 305 AFCKNGKIPEA 315



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 140/338 (41%), Gaps = 46/338 (13%)

Query: 104 MRDTGPVRCTLETDYRRHV--------AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           +RD     C  E    RH+        A+I  LC    +  A  L  +M + G  P V T
Sbjct: 204 VRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVET 263

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
            N L++     G LEK   V+ +M +     +  ++ + +  +C+  ++ +A+ +   M 
Sbjct: 264 FNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI 323

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
              + PN   +N ++                                      D+Y ++G
Sbjct: 324 YKDVAPNAQVYNSII--------------------------------------DAYIESG 345

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
           D  QA  L   M    +   IV YN+L+ G C +  I  A      +  +G  PDV++YN
Sbjct: 346 DTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYN 405

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           T+++  C +G  D+A      ++K G+ P   +Y T++  L   G +         ML K
Sbjct: 406 TIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHK 465

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
           +V P   I+ +++D Y RC + S   S++  M   G++
Sbjct: 466 NVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIA 503



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 3/217 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +++D     +V++  C  GKI  A+ +   MI K   P+   +N +++   + GD E+A 
Sbjct: 292 IKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAF 351

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M     S +  TYN  + G CR +++D+A  L  T+ N G+RP+ V++N ++ A 
Sbjct: 352 LLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISAC 411

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C KG    A++ L E+   +       + T   L+ +    G       L+  M  KN++
Sbjct: 412 CNKGDTDKALELLQEM---NKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVE 468

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                Y ++++ +    + S   +   +M ++G   D
Sbjct: 469 PSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 220/446 (49%), Gaps = 8/446 (1%)

Query: 90  LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
           LD +L EN  ++     T   +  L  +   +  +++ LC   ++  A  L  +M  KG 
Sbjct: 151 LDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGC 210

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            PD +T+  +V+ LCK G ++ A    RE++  R  P+   YNA I G C+   ++ A+ 
Sbjct: 211 PPDAVTYTTMVSSLCKAGKIDDA----RELAG-RFKPSVPVYNALIDGMCKEGRIEVAIK 265

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L   M +NG+ PN V+++ ++++LC  G +  A     ++         +++ T T L+ 
Sbjct: 266 LLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG---CDANIHTFTPLIK 322

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
             F  G  ++AL LW  M Q   + ++VAYN LI+G C NG +  A     QM + G LP
Sbjct: 323 GCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP 382

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           +V TY+ L++   K G L  AS  +  +   G  P+ ++Y  ++  LC +    +A   +
Sbjct: 383 NVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLV 442

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M  +   P    +N  I G    G +  A  + + M   G   N+ T+N L+ A  R 
Sbjct: 443 EKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRM 502

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
               +AF L +E+    + P++ TYN ++      G +  ALQL+ + L RG  PD ITY
Sbjct: 503 NKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITY 562

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTL 535
             +I  +C +G +K A ++  ++ ++
Sbjct: 563 NTMIHAYCKQGKVKIAAQLVERVSSM 588



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 210/439 (47%), Gaps = 8/439 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G    AL +  ++ + G  P V  +N+L++ L      +  + +   M +    PN  TY
Sbjct: 123 GSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY 182

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  +   C+ + +D A  LF  M+N G  P+ VT+  +V +LCK G + DA +       
Sbjct: 183 NILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL------ 236

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
              G+    V     L+D   K G    A+ L  +M    +  ++V+Y+ +IN  C++G+
Sbjct: 237 --AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGN 294

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  AFA F QM  RG   ++ T+  L+     +GKL EA   + ++ + G  P+ ++Y T
Sbjct: 295 VELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNT 354

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC +G + +A +    M     +P    ++++IDG+ + GDL  A    + M+S G
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              NV T+  ++    +      A SL ++M L+G  P+  T+N  I   C  G +  A+
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAM 474

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +L + M   G  P+I TY EL+         +EA  +F +I+   L  + + +  +   +
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534

Query: 552 RRMKESDKARDIHQKWLLR 570
            R     +A  +  K L+R
Sbjct: 535 SRAGMMGEALQLFGKALVR 553



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 194/412 (47%), Gaps = 8/412 (1%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L   M + G +P+V T+N L+  LCK   ++ A  +  EMS     P+  TY   ++  C
Sbjct: 166 LYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLC 225

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +  ++D A  L         +P+   +N L+  +CK+G +  A+K LGE++   D     
Sbjct: 226 KAGKIDDARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMM---DNGVDP 277

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +V++ + +++S   +G+   A AL+  MF +    +I  +  LI G  + G +  A   +
Sbjct: 278 NVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW 337

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M++ G  P+V+ YNTL++ LC  G L+EA      + ++G  P+  +Y  +I G    
Sbjct: 338 KLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKS 397

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           GD+V A E    M+     P    +  ++D   +      A S+ + M   G + N  TF
Sbjct: 398 GDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTF 457

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N  I      G +  A  L + M   G  P++ TYN L+ A   +     A  L+ E+  
Sbjct: 458 NTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           R + P+++TY  ++ G    G M EA ++F K    G A D I +  +   Y
Sbjct: 518 RNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAY 569



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 4/222 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++  LC       A  L  KM  +G  P+ +T N  +  LC  G +E A  ++  M 
Sbjct: 422 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQ 481

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  TYN  +    R+N+ ++A  LF  +    ++PN VT+N +++   + G++G
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 541

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD-KFQALALWNDMFQKNIQTDIVAY 299
           +A++  G+ L         D IT   ++ +Y K G  K  A  +      K    DI+ Y
Sbjct: 542 EALQLFGKALVRG---TAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITY 598

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
             LI G C   +I  A A+  + + +G  P+  T+N L+ C 
Sbjct: 599 TSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640



 Score = 47.4 bits (111), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 69/164 (42%)

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           + V+I+  GR  ++     I   M   G++     F  +I    R GS   A  +   + 
Sbjct: 77  YRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIG 136

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             G  P V  YN L+ A  +     +   LY  M + G+ P++ TY  L+K  C    + 
Sbjct: 137 EFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVD 196

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
            A ++F ++   G   D + +  +     +  + D AR++  ++
Sbjct: 197 AAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF 240


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 212/431 (49%), Gaps = 35/431 (8%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           ++++ G  PDV ++N L++   K G+++KA  +  +M E    PN  TY++ I G C+  
Sbjct: 214 RLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTK 273

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE----VLADDDGKAT 258
           E+DKA  +   M   G+RPN +T+N L+H     G+  ++V+   E    +L  D G   
Sbjct: 274 EMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCN 333

Query: 259 S----------------------------DVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           S                            DVI+   L+  Y   G       L+N M  +
Sbjct: 334 SFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCE 393

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            +  D   +N LIN +   G +  +   F  M K+G  PD+IT++T+++  C+ G+LD+A
Sbjct: 394 GVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDA 453

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVII 408
              +  +  TGV PD   Y  +IQG C   D+VKA+E +  ML K  +P P I  +  II
Sbjct: 454 MEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG-IPPPCIKFFTSII 512

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           +   + G ++    + DL++  G   N+ TFN+L+      G++ +A  L   M   G+ 
Sbjct: 513 NNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVE 572

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PD++TYN L+   C  G I  AL L+ +ML + +T   ++Y  ++ G         A+E+
Sbjct: 573 PDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEM 632

Query: 529 FAKIQTLGLAI 539
           F ++   G+A+
Sbjct: 633 FHEMIESGMAV 643



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 184/420 (43%), Gaps = 39/420 (9%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           +P   TYN  I  Y R    D  L +F  +   G+ P+  ++N L+    K+G +  A  
Sbjct: 186 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 245

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              ++   ++     +V+T + L++   K  +  +A  +   M    ++ + + YN LI+
Sbjct: 246 LFYKM---EEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIH 302

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G+  +G    +   F +M     +PDV   N+ +  LCK G++ EA   +  +   G  P
Sbjct: 303 GYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKP 362

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D ISY  ++ G    G I         M+ + VVP+ H++N +I+ Y R G +  +  + 
Sbjct: 363 DVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMF 422

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           + M   GV+ ++ TF+ +I A  R G + DA      M+  G+ PD   Y+ LI   CN 
Sbjct: 423 EDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 482

Query: 485 GHIHLALQLYDEMLRRGITP------------------------------------DIIT 508
             +  A +L  +ML +GI P                                    ++IT
Sbjct: 483 RDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLIT 542

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +  L+ G+C  GNMKEA  +   ++++G+  D   +  L   Y +    D A  + +  L
Sbjct: 543 FNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDML 602



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 204/446 (45%), Gaps = 11/446 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           +KE  D   +M   GP     + D   + A++      G I     L   M+ +G VPD 
Sbjct: 345 IKEARDIFDSMVLKGP-----KPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDR 399

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
              N L+N   ++G ++K+  +  +M++   +P+  T++  I+ +CR+  LD A+  F+ 
Sbjct: 400 HVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNH 459

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M + G+ P+   ++ L+   C +  L  A + + ++L+           TS I  ++  K
Sbjct: 460 MIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSII--NNLCK 517

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +   + + +     + +++ +N L++G+CL G++  A      M   G  PD+ T
Sbjct: 518 EGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYT 577

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YNTL++  CK G++D+A   +  +    V    +SY  I+ GL      + A+E    M+
Sbjct: 578 YNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMI 637

Query: 394 EKSVVPEPHIWNVIIDGYGR--CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           E  +    H +  ++ G  R  C D +N   + + + S  V  ++ TFN +I A  + G 
Sbjct: 638 ESGMAVSIHTYATVLGGLCRNNCTDEANM--LLEKLFSMNVKFDILTFNIVIRAMFKVGR 695

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
             +A  L   +   G+ P + TY ++I           A  L+  M +   TPD     E
Sbjct: 696 RQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNE 755

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGL 537
           +I+    +G + +A    +KI   G+
Sbjct: 756 IIRMLLNKGEVAKAGNYLSKIDKKGI 781



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 190/412 (46%), Gaps = 14/412 (3%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  G+I  A  +   M+ KG  PDV+++  L++     G +   D++   M      P+
Sbjct: 339 LCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPD 398

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
              +N  I  Y R+  +DK+L +F  M   G+ P+ +T + ++ A C+ G L DA++   
Sbjct: 399 RHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFN 458

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY-NVLINGF 306
            ++   D     D    + L+       D  +A  L +DM  K I    + +   +IN  
Sbjct: 459 HMI---DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNL 515

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C  G ++        ++  G  P++IT+N+L++  C  G + EA      +   GV PD 
Sbjct: 516 CKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDI 575

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
            +Y T++ G C HG I  A      ML K V      +N+I+ G  +      A  +   
Sbjct: 576 YTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHE 635

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP-----DVFTYNLLIGAS 481
           M+  G++ ++ T+  ++     GG   +  + +  MLL+ +F      D+ T+N++I A 
Sbjct: 636 MIESGMAVSIHTYATVL-----GGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAM 690

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
             +G    A +L+  +   G+ P I+TY  +I       + ++A+ +F+ ++
Sbjct: 691 FKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 742



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 160/324 (49%), Gaps = 35/324 (10%)

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           +A   + T  IL++ Y +       L ++  + +  +  D+ +YN LI+GF   G++  A
Sbjct: 184 EAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKA 243

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F +M ++G +P+V+TY++L+N LCK  ++D+A      +   GV P+ ++Y  +I G
Sbjct: 244 HDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHG 303

Query: 376 -----------------------------------LCIHGDIVKAREFLLSMLEKSVVPE 400
                                              LC HG I +AR+   SM+ K   P+
Sbjct: 304 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 363

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +  ++ GY   G ++   ++ ++M+  GV  +   FN LI A  R G +  +  + +
Sbjct: 364 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFE 423

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           +M   G+ PD+ T++ +I A C LG +  A++ ++ M+  G+ PD   Y+ LI+G C R 
Sbjct: 424 DMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRR 483

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPF 544
           ++ +A+E+ + + + G+    I F
Sbjct: 484 DLVKAKELISDMLSKGIPPPCIKF 507


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 222/473 (46%), Gaps = 34/473 (7%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++  A  L+ KM  KG  P++ T+  L+N L K+   +K +H++ EM    
Sbjct: 261 IINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAG 320

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN   +N  I GYC++  ++ AL +   M +  I P  VT   L+   CK   +  A 
Sbjct: 321 FNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAE 380

Query: 244 KFLGEVLAD------DDGKAT---------------------------SDVITSTILMDS 270
             L E+L+       D+  +                            SD++  T+L+  
Sbjct: 381 NALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLL-TMLVCG 439

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K+G   +A  LW  + +K      V  N LI+G C  G +  A     +ML+RG   D
Sbjct: 440 LCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMD 499

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            ITYN L+   C +GK++        ++K G+ PD  +Y  +++GLC  G +  A +   
Sbjct: 500 RITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWD 559

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
                 ++   H + ++++GY +   + +  ++ + +LS  +  N   +N +I A  + G
Sbjct: 560 EFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNG 619

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           ++  A  L + M   GI P+  TY+ LI   CN+G +  A  L DEM + G  P+++ YT
Sbjct: 620 NVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYT 679

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            LI G+C  G M  AE  + ++ +  +  +   + ++   Y ++   +KA ++
Sbjct: 680 ALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNL 732



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 196/409 (47%), Gaps = 3/409 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +++ +G  PDV +   ++N LCK G +E A  +  +M ++  SPN  TYN  I G C+  
Sbjct: 210 RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNG 269

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            LD A  L   M   G++PN  T+  L++ L K          L E++         +V+
Sbjct: 270 RLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIG---AGFNPNVV 326

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
               L+D Y K G+   AL + + M  KNI    V    L+ GFC +  I  A     ++
Sbjct: 327 VFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEI 386

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L  G         ++++ LCK+ +   A  F  ++      P  +    ++ GLC  G  
Sbjct: 387 LSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKH 446

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
           ++A E    +LEK         N +I G    G L  A  I   ML  G+  +  T+NAL
Sbjct: 447 LEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNAL 506

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           IL     G +   F L++EM   GI PD++TYN L+   CN+G +  A++L+DE    G+
Sbjct: 507 ILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGL 566

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
             +I TY  +++G+C    +++ E +F ++ +  + ++ I + I+ K +
Sbjct: 567 ISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 615



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 177/390 (45%), Gaps = 42/390 (10%)

Query: 128 LCLGGK--IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           LC  GK    T LW R  +++KG+    +T N L++ LC  G L +A  +++EM E    
Sbjct: 440 LCKDGKHLEATELWFR--LLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLP 497

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
            +  TYNA I G+C   +++    L   M   GI+P+  T+N L+  LC  G L DA+K 
Sbjct: 498 MDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIK- 556

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
                                                LW++     + ++I  Y +++ G
Sbjct: 557 -------------------------------------LWDEFKASGLISNIHTYGIMMEG 579

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           +C    I      F ++L +    + I YN ++   C+ G +  A      +   G+ P+
Sbjct: 580 YCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPN 639

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
             +Y ++I G+C  G +  A+  +  M ++  VP    +  +I GY + G +  A S   
Sbjct: 640 CATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWL 699

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M+SF +  N FT+  +I    + G++  A +L  +M   GI PDV TYN+L    C   
Sbjct: 700 EMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAN 759

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKG 515
            +  A ++ D+M   G+  D ITYT L+ G
Sbjct: 760 DMDNAFKVCDQMATEGLPVDEITYTTLVHG 789



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 133/297 (44%), Gaps = 38/297 (12%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   + A+I   C  GK+     LR +M ++G  PD+ T+N+L+  LC +G L+ A 
Sbjct: 496 LPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAI 555

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELD---------------------------- 205
            +  E        N  TY   + GYC+ N ++                            
Sbjct: 556 KLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 615

Query: 206 -------KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
                   AL L   M + GI PN  T++ L+H +C  GL+ DA   + E+  +      
Sbjct: 616 CQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEG---FV 672

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            +V+  T L+  Y K G    A + W +M   NI  +   Y V+I+G+C  G++  A   
Sbjct: 673 PNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNL 732

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
             +M + G +PDV+TYN L N  CK   +D A      ++  G+  D+I+Y T++ G
Sbjct: 733 LIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 69/145 (47%)

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           ++S G   +VF+F  +I A  +GG + +A  L  +M   GI P+V TYN +I   C  G 
Sbjct: 211 VMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGR 270

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A +L ++M  +G+ P++ TY  LI G        +   +  ++   G   + + F  
Sbjct: 271 LDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNN 330

Query: 547 LKKRYRRMKESDKARDIHQKWLLRN 571
           L   Y +M   + A  I    + +N
Sbjct: 331 LIDGYCKMGNIEGALKIKDVMISKN 355


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 206/428 (48%), Gaps = 3/428 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   + AV++ LC+  + G    L  +M++    P+++T N L+  LC+ G  E+   
Sbjct: 213 EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHE 272

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+ +MSE   +P+   Y   I G C+   L+ A  + + M + G++PN V +N ++  LC
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
                 +A + L E+   D      D +T  IL+D + +NG   + + L   M       
Sbjct: 333 SAERWKEAEELLSEMFQKD---CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D++ Y  +INGFC  G I  A      M   G  P+ ++Y  +L  LC  G+  +A    
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + + G  P+ +++ T+I  LC  G + +A E L  ML     P+   ++ +IDG G+ 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G    A  + ++M++ G+S N   ++++  A +R G +     +   +    I  D   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N +I + C       A+  +  M+  G  P+  TYT LIKG  + G  KEA+E+ +++ +
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629

Query: 535 LGLAIDHI 542
            G    H+
Sbjct: 630 RGALRKHL 637



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 197/443 (44%), Gaps = 6/443 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           HV ++   C  G    ++ +   M  KG   D    N ++N +C+ G +++A  ++R+++
Sbjct: 150 HV-ILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                 +  +YNA + G C          L   M      PN VT N L+  LC+ GL  
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLF- 267

Query: 241 DAVKFLGEVLAD-DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
              + + EVLA   +   T D+     ++D   K G    A  + N M    ++ ++V Y
Sbjct: 268 ---ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N ++ G C       A     +M ++    D +T+N L++  C+ G +D        +  
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G  PD I+Y T+I G C  G I +A   L SM      P    + +++ G    G   +
Sbjct: 385 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD 444

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +   M+  G   N  TFN LI    + G +  A  L K+ML++G  PD+ +Y+ +I 
Sbjct: 445 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 504

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                G    AL+L + M+ +GI+P+ I Y+ +       G + +  ++F  I+   +  
Sbjct: 505 GLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRS 564

Query: 540 DHIPFRILKKRYRRMKESDKARD 562
           D + +  +     +  E+D+A D
Sbjct: 565 DAVLYNAVISSLCKRWETDRAID 587



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 196/413 (47%), Gaps = 3/413 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+  T   +V  LC  G +  A  V+ EMS    +P    Y+  +   CR      ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   G   +    N++++A+C++G + +AV  L + LA    +A  D+++   ++  
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRK-LAFFGCEA--DIVSYNAVLKG 225

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                       L ++M + +   +IV +N LI   C NG          QM + G  PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           +  Y T+++ +CK+G L+ A+     +   G+ P+ + Y T+++GLC      +A E L 
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M +K    +   +N+++D + + G +     + + MLS G   +V T+  +I    + G
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            I +A  L K M   G  P+  +Y +++   C+ G    A +L  +M+++G  P+ +T+ 
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            LI   C +G +++A E+  ++   G + D I +  +     +  ++++A ++
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL 518



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 165/360 (45%), Gaps = 6/360 (1%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            YNA + GYCR  +L  A  L + +    + PN  T   +V  LC +G + DA++ L E+
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
                G A    +   IL ++  ++G    ++ +   M  K    D    N+++N  C  
Sbjct: 138 --SFKGCAPIPPMYHVIL-EAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G +  A     ++   G   D+++YN +L  LC   +  +       + +   AP+ +++
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            T+I  LC +G   +  E L  M E    P+  ++  IIDG  + G L  A  I + M S
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
           +G+  NV  +N ++          +A  L  EM       D  T+N+L+   C  G +  
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
            ++L ++ML  G  PD+ITYT +I G C  G + EA  +   + + G   + + + I+ K
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 87/217 (40%), Gaps = 38/217 (17%)

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+ YN ++   C+ G+L  A      +    V P+  ++  +++GLC  G I  A E L 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M  K   P P +++VI++   R G   N+  + + M + G +                 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTL---------------- 179

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
                              D    NL++ A C  G +  A+ L  ++   G   DI++Y 
Sbjct: 180 -------------------DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYN 220

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            ++KG C      + EE+  ++  +  A + + F  L
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 221/447 (49%), Gaps = 23/447 (5%)

Query: 124 VIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +I   C+GG+   A+ WL   M++ G  P V T   +++ LC+ G++ +A  +   + +M
Sbjct: 288 LINACCIGGRTWVAIDWLHL-MVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDM 346

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +PN A YN  + GY +  E+ +A  L+  M   G+ P+ VT NILV    K G + D+
Sbjct: 347 GIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDS 406

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKN---------GDKFQALALWNDMFQKNIQ 293
            + L             D+I S + +DS   +         G   +A+ L  ++ +K + 
Sbjct: 407 DRLL------------KDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLT 454

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             +VA+N LI  +   G    AF  +  M++ GF P   T N+LL  LC++G L EA   
Sbjct: 455 LSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARIL 514

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + + G   ++++Y  ++ G     ++  A+     M E+ + P+   +  +IDG  +
Sbjct: 515 LYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSK 574

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G++  A+ +   M + G   N F +N+LI      G + +A  L+KEM   G+  D FT
Sbjct: 575 AGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFT 634

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +N++I   C  G +  A++ + +M R G+ PDI T+  LI G+C   +M  A E+  K+ 
Sbjct: 635 FNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMY 694

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKA 560
           + GL  D   +      Y RM++ ++A
Sbjct: 695 SCGLDPDITTYNTYMHGYCRMRKMNQA 721



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 227/506 (44%), Gaps = 43/506 (8%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E L+ L+ MR  G VR  L +       ++R L   G  G+   L + MI KG  P  LT
Sbjct: 195 EALEVLRMMRGVG-VRPGLSSI----TILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLT 249

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
            N ++   C+   +   + ++  M +   SP+  T+N  I   C       A+     M 
Sbjct: 250 FNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMV 309

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
            +G+ P+  T   ++HALC++G + +A K    +   D G A +  I +T LMD YFK  
Sbjct: 310 RSGVEPSVATFTTILHALCREGNVVEARKLFDGI--QDMGIAPNAAIYNT-LMDGYFKAR 366

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLING------------------------------ 305
           +  QA  L+ +M    +  D V +N+L+ G                              
Sbjct: 367 EVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYD 426

Query: 306 -----FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
                 C  G +  A     ++L++G    V+ +N+L+    + G  D+A   Y ++ + 
Sbjct: 427 VMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRC 486

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  P   +  +++ GLC  G + +AR  L  MLEK        + V++DGY +  +L  A
Sbjct: 487 GFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGA 546

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +   M   G+  +   F ALI   ++ G++ +A+ +  EM   G  P+ F YN LI  
Sbjct: 547 QFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRG 606

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C+ G +  AL+L  EM ++G+  D  T+  +I G C RG MK A E F  +Q +GL  D
Sbjct: 607 LCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPD 666

Query: 541 HIPFRILKKRYRRMKESDKARDIHQK 566
              F IL   Y +  +   A +I  K
Sbjct: 667 IFTFNILIGGYCKAFDMVGAGEIVNK 692



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 205/438 (46%), Gaps = 3/438 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR  +E        ++  LC  G +  A  L   +   G  P+   +N L++   K  ++
Sbjct: 309 VRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREV 368

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A  +  EM     SP+C T+N  + G+ +   ++ +  L   +  +G+  +   ++++
Sbjct: 369 AQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVM 428

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           V +LC  G L +A+K L E+L   +   T  V+    L+ +Y + G + +A   +  M +
Sbjct: 429 VSSLCWAGRLDEAMKLLQELL---EKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVR 485

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
                     N L+ G C  G +  A     +ML++GF  + + Y  LL+   K   L+ 
Sbjct: 486 CGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEG 545

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   +  + + G+ PD +++  +I GL   G++ +A E  L M     VP    +N +I 
Sbjct: 546 AQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIR 605

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G   CG ++ A  +   M   G+ S+ FTFN +I    R G +  A     +M   G+ P
Sbjct: 606 GLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLP 665

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D+FT+N+LIG  C    +  A ++ ++M   G+ PDI TY   + G+C    M +A  + 
Sbjct: 666 DIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIIL 725

Query: 530 AKIQTLGLAIDHIPFRIL 547
            ++ + G+  D + +  +
Sbjct: 726 DQLISAGIVPDTVTYNTM 743



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 189/420 (45%), Gaps = 37/420 (8%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+I  +  L + +I  G   D   ++ +V+ LC  G L++A  +++E+ E   + +   +
Sbjct: 401 GRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAF 460

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N+ I  Y R    DKA   +  M   G  P+  T N L+  LC+KG L +A   L  +L 
Sbjct: 461 NSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRML- 519

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            + G   + V   T+L+D YFK  +   A  LW +M ++ I  D VA+  LI+G    G+
Sbjct: 520 -EKGFPINKV-AYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGN 577

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A+  F +M   GF+P+   YN+L+  LC  G++ EA      + + G+  D  ++  
Sbjct: 578 VEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNI 637

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           II G C  G +  A E  L M    ++P+   +N++I GY +  D+  A  I + M S G
Sbjct: 638 IIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCG 697

Query: 432 VSSNVFTFNALILAETR----------------GGSIFD------------------AFS 457
           +  ++ T+N  +    R                 G + D                  A  
Sbjct: 698 LDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSDILDRAMI 757

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L  ++L  G  P+V T N+L+   C  G    AL    ++       D I+Y  L + +C
Sbjct: 758 LTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYC 817



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 147/307 (47%), Gaps = 6/307 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VRC          +++  LC  G +  A  L  +M++KG   + + +  L++   K+ +L
Sbjct: 484 VRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNL 543

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E A  + +EM E    P+   + A I G  +   +++A  +F  M+  G  PN   +N L
Sbjct: 544 EGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSL 603

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LC  G + +A+K   E+         SD  T  I++D + + G    A+  + DM +
Sbjct: 604 IRGLCDCGRVTEALKLEKEM---RQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQR 660

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             +  DI  +N+LI G+C   D+  A     +M   G  PD+ TYNT ++  C+  K+++
Sbjct: 661 IGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQ 720

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV-KAREFLLSMLEKSVVPEPHIWNVII 408
           A      L   G+ PD ++Y T++ G+C   DI+ +A      +L+   +P     N+++
Sbjct: 721 AVIILDQLISAGIVPDTVTYNTMLSGIC--SDILDRAMILTAKLLKMGFIPNVITTNMLL 778

Query: 409 DGYGRCG 415
             + + G
Sbjct: 779 SHFCKQG 785



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 127/283 (44%), Gaps = 39/283 (13%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A +L ++M ++G  PD +    L++ L K G++E+A  V  EMS +   PN   YN+ I 
Sbjct: 546 AQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIR 605

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C    + +AL L   M   G+  +  T NI++   C++G     +KF  E   D    
Sbjct: 606 GLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRG----QMKFAIETFLDMQRI 661

Query: 257 AT-SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC-------- 307
               D+ T  IL+  Y K  D   A  + N M+   +  DI  YN  ++G+C        
Sbjct: 662 GLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQA 721

Query: 308 ----------------------LNGDISS----AFAYFCQMLKRGFLPDVITYNTLLNCL 341
                                 L+G  S     A     ++LK GF+P+VIT N LL+  
Sbjct: 722 VIILDQLISAGIVPDTVTYNTMLSGICSDILDRAMILTAKLLKMGFIPNVITTNMLLSHF 781

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           CKQG  ++A  +   L +     D+ISY+ + Q  C+  D V+
Sbjct: 782 CKQGMPEKALIWGQKLREISFGFDEISYRILDQAYCLMQDDVE 824



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 135/307 (43%)

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           SD      L+  +   G  F+AL +   M    ++  + +  +L+      GD  S +  
Sbjct: 175 SDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKL 234

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           F  M+ +G  P  +T+N ++   C+Q ++        ++ K   +PD +++  +I   CI
Sbjct: 235 FKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCI 294

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G    A ++L  M+   V P    +  I+    R G++  A  + D +   G++ N   
Sbjct: 295 GGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAI 354

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N L+    +   +  A  L +EM   G+ PD  T+N+L+      G I  + +L  +++
Sbjct: 355 YNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLI 414

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             G+  D   Y  ++   C  G + EA ++  ++   GL +  + F  L   Y R    D
Sbjct: 415 VSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLED 474

Query: 559 KARDIHQ 565
           KA + ++
Sbjct: 475 KAFEAYR 481


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 206/431 (47%), Gaps = 6/431 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   H A++R L    ++  A  +  +M + G  PD + +N +++ L K G  ++A  V+
Sbjct: 224 DRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M      P   TY   +   C+   L++A  LF  MA +G RPN V +  L+H   K 
Sbjct: 284 DNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKS 343

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A     E++   +     DVIT T+++D   K+G+  QA   + +M +   + ++
Sbjct: 344 GRMKEACSLFDEMV---EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNV 400

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  +I G    G +++AF     M+  G  PD +TY  LL+  CK G+LDEA+     
Sbjct: 401 VTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDE 460

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV-VPEPHIWNVIIDGYGRCG 415
           L K   +P+   Y +++ GLC  G + K  + L    + +    +P +   II G  + G
Sbjct: 461 LDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTG 520

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            L  A  I   M+S G   +  T+N LI  L  +R   +  AF+L  ++   G  PD  T
Sbjct: 521 RLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVT 580

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  L    C +G +  A+++ +E   RG   D++ YT L  G C +G +  A  +F ++ 
Sbjct: 581 YTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMV 640

Query: 534 TLGLAIDHIPF 544
             G A D   +
Sbjct: 641 RQGGAPDAAAY 651



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 211/482 (43%), Gaps = 36/482 (7%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I      G++  A  L  +M++ G  PDV+TH  +++ LCK G+ E+A     EM 
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM 392

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  TY   I G  ++  +  A  +   M  +G  P+ VT+  L+   CK G L 
Sbjct: 393 RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLD 452

Query: 241 DAVKFLGEV------------------LAD------------DDGKATSDVITSTI---L 267
           +A + L E+                  L D            +  KA ++ +   +   +
Sbjct: 453 EAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSI 512

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD--ISSAFAYFCQMLKR 325
           +    K G   +A  ++  M  +  + D   YN+LING C + +  +  AFA    + K 
Sbjct: 513 IVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKV 572

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G+LPD +TY  L   LCK G++D A       S  G   D ++Y  +  GLC  G + +A
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA 632

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
                 M+ +   P+   +  II+G  +   L +A    D M+  G    V T+ AL+ A
Sbjct: 633 VSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQA 692

Query: 446 ETRGGSIFDAFSLKKEMLLDG-IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
               G++ +AF   + ML  G +   V  Y+ LI   C    +  AL+L+++M+ RG  P
Sbjct: 693 LCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVP 752

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
             +T   L  G    G  ++A+E+  ++   G       F  +    R+  ES K   + 
Sbjct: 753 TAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLV 812

Query: 565 QK 566
           Q+
Sbjct: 813 QE 814



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 204/468 (43%), Gaps = 45/468 (9%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           +C    D   +  +I  L   G    AL +   M+ K  VP  +T+  LVN LCK G LE
Sbjct: 253 KCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLE 312

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A+ + R M+     PN   Y + I G+ +   + +A  LF  M   G RP+ +TH +++
Sbjct: 313 RAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMI 372

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LCK G    A K   E++    G    +V+T T ++    K G    A  +   M   
Sbjct: 373 DGLCKSGNFEQAAKSFEEMM---RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAH 429

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN--C-------- 340
               D V Y  L++GFC  G +  A     ++ K    P++  Y++L+N  C        
Sbjct: 430 GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKT 489

Query: 341 --------------------------LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
                                     LCK G+LDEA   +  +   G  PD  +Y  +I 
Sbjct: 490 LDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN 549

Query: 375 GLCIHGDIVKAREF-LLSMLEK-SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           GLC   +    R F LL  LEK   +P+   +  +  G  + G++  A  + +   S G 
Sbjct: 550 GLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGW 609

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           +++V  + AL       G +  A SL +EM+  G  PD   Y  +I     +  +  A +
Sbjct: 610 NADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACK 669

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEA----EEVFAKIQTLG 536
            +DEM+ +G  P + TYT L++  C  GN+ EA    E + A+ + +G
Sbjct: 670 FFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVG 717



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 199/423 (47%), Gaps = 8/423 (1%)

Query: 121 HVA-VIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           HVA V+R L +    GTA+ + R    Q G   DV T+N L+N L    +  +   +  E
Sbjct: 88  HVAAVLRSLKV---TGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEE 144

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M +   +PN  ++N  I  + R    D A+  F  M     +P+  T  ILV  LCK G+
Sbjct: 145 MLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGM 204

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
              A +   E++A   G    D    T ++ +  K     +A  ++  M +     D +A
Sbjct: 205 DEKAFEVFHEMMAM--GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIA 262

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           YN +I+G    G    A      ML +  +P  +TY  L+N LCK G L+ A   + V++
Sbjct: 263 YNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMA 322

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
            +G  P+ + Y ++I G    G + +A      M+E    P+     V+IDG  + G+  
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A    + M+  G   NV T+  +I   ++ G + +AF + K M+  G FPD  TY  L+
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLL 442

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM-KEAEEVFAKIQTLGL 537
              C LG +  A QL DE+ +   +P++  Y+ L+ G C  G++ K  +++F + +    
Sbjct: 443 DGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAE 502

Query: 538 AID 540
            +D
Sbjct: 503 TLD 505



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 147/299 (49%), Gaps = 1/299 (0%)

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           IL+ S+ +      A+  +  M +K  + D+  + +L++  C  G    AF  F +M+  
Sbjct: 159 ILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAM 218

Query: 326 GFLP-DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           GF+P D   +  ++  L K  ++ EA   +G + K G  PD I+Y T+I GL   G   +
Sbjct: 219 GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQE 278

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A + L +ML K+ VP    + ++++   + G L  A  +  +M + G   N   + +LI 
Sbjct: 279 ALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIH 338

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              + G + +A SL  EM+  G  PDV T+ ++I   C  G+   A + ++EM+R G  P
Sbjct: 339 GFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKP 398

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           +++TYT +I+G    G +  A  +   +   G   D + +  L   + ++   D+A  +
Sbjct: 399 NVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQL 457


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 222/473 (46%), Gaps = 34/473 (7%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++  A  L+ KM  KG  P++ T+  L+N L K+   +K +HV+ EM    
Sbjct: 284 IINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSG 343

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN   +N  I GYC++  ++ AL +   M +  I P  VT   L+   CK   +  A 
Sbjct: 344 FNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAE 403

Query: 244 KFLGEVLAD------DDGKAT---------------------------SDVITSTILMDS 270
             L E+L+       D+  +                            SD++  T+L+  
Sbjct: 404 NALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLL-TMLVCG 462

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K+G   +A  LW  + +K      V  N LI+G C  G +  A     +ML+RG   D
Sbjct: 463 LCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMD 522

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            ITYN L+   C +GK++        ++K G+ PD  +Y  +++GLC  G +  A +   
Sbjct: 523 RITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWD 582

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
                 ++   H + ++++GY +   + +  ++ + +LS  +  N   +N +I A  + G
Sbjct: 583 EFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNG 642

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           ++  A  L + M   GI P+  TY+ LI   CN+G +  A  L DEM + G  P+++ YT
Sbjct: 643 NVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYT 702

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            LI G+C  G M  AE  + ++ +  +  +   + ++   Y ++   +KA ++
Sbjct: 703 ALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNL 755



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 196/409 (47%), Gaps = 3/409 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +++ +G  PDV +   ++N LCK G +E A  +  +M ++  SPN  TYN  I G C+  
Sbjct: 233 RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNG 292

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            LD A  L   M   G++PN  T+  L++ L K          L E++         +V+
Sbjct: 293 RLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSG---FNPNVV 349

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
               L+D Y K G+   AL + + M  KNI    V    L+ GFC +  I  A     ++
Sbjct: 350 VFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEI 409

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L  G         ++++ LCK+ +   A  F  ++      P  +    ++ GLC  G  
Sbjct: 410 LSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKH 469

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
           ++A E    +LEK         N +I G    G L  A  I   ML  G+  +  T+NAL
Sbjct: 470 LEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNAL 529

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           IL     G +   F L++EM   GI PD++TYN L+   CN+G +  A++L+DE    G+
Sbjct: 530 ILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGL 589

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
             +I TY  +++G+C    +++ E +F ++ +  + ++ I + I+ K +
Sbjct: 590 ISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 638



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 177/390 (45%), Gaps = 42/390 (10%)

Query: 128 LCLGGK--IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           LC  GK    T LW R  +++KG+    +T N L++ LC  G L +A  +++EM E    
Sbjct: 463 LCKDGKHLEATELWFR--LLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLP 520

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
            +  TYNA I G+C   +++    L   M   GI+P+  T+N L+  LC  G L DA+K 
Sbjct: 521 MDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIK- 579

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
                                                LW++     + ++I  Y +++ G
Sbjct: 580 -------------------------------------LWDEFKASGLISNIHTYGIMMEG 602

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           +C    I      F ++L +    + I YN ++   C+ G +  A      +   G+ P+
Sbjct: 603 YCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPN 662

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
             +Y ++I G+C  G +  A+  +  M ++  VP    +  +I GY + G +  A S   
Sbjct: 663 CATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWL 722

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M+SF +  N FT+  +I    + G++  A +L  +M   GI PDV TYN+L    C   
Sbjct: 723 EMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAN 782

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKG 515
            +  A ++ D+M   G+  D ITYT L+ G
Sbjct: 783 DMDNAFKVCDQMATEGLPVDEITYTTLVHG 812



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 204/428 (47%), Gaps = 10/428 (2%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           + +KGT P + T N+L++ L K  + EK   V R MSE    P+  ++   I   C+  +
Sbjct: 200 LARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVINALCKGGK 258

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA---DDDGKATSD 260
           ++ A+ LF  M   GI PN VT+N +++ LC+ G L +A +   ++       + K    
Sbjct: 259 MENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGA 318

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           +I   I ++ +    DK   +   ++M       ++V +N LI+G+C  G+I  A     
Sbjct: 319 LINGLIKLNFF----DKVNHVL--DEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKD 372

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            M+ +   P  +T  +L+   CK  +++ A +    +  +G++    +  +++  LC   
Sbjct: 373 VMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKF 432

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
               A  F   ML ++  P   +  +++ G  + G    A  +   +L  G  ++  T N
Sbjct: 433 RYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSN 492

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           ALI      G + +A  + KEML  G+  D  TYN LI   CN G +    +L +EM +R
Sbjct: 493 ALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR 552

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           GI PDI TY  L++G C  G + +A +++ + +  GL  +   + I+ + Y +    +  
Sbjct: 553 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 612

Query: 561 RDIHQKWL 568
            ++  + L
Sbjct: 613 ENLFNELL 620



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 133/297 (44%), Gaps = 38/297 (12%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   + A+I   C  GK+     LR +M ++G  PD+ T+N+L+  LC +G L+ A 
Sbjct: 519 LPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAI 578

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELD---------------------------- 205
            +  E        N  TY   + GYC+ N ++                            
Sbjct: 579 KLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 638

Query: 206 -------KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
                   AL L   M + GI PN  T++ L+H +C  GL+ DA   + E+  +      
Sbjct: 639 CQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEG---FV 695

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            +V+  T L+  Y K G    A + W +M   NI  +   Y V+I+G+C  G++  A   
Sbjct: 696 PNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNL 755

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
             +M + G +PDV+TYN L N  CK   +D A      ++  G+  D+I+Y T++ G
Sbjct: 756 LIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 1/180 (0%)

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           +  K   P     N ++    +  +      +  +M S G   +VF+F  +I A  +GG 
Sbjct: 200 LARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVM-SEGACPDVFSFTNVINALCKGGK 258

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + +A  L  +M   GI P+V TYN +I   C  G +  A +L ++M  +G+ P++ TY  
Sbjct: 259 MENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGA 318

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           LI G        +   V  ++   G   + + F  L   Y +M   + A  I    + +N
Sbjct: 319 LINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKN 378


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 208/425 (48%), Gaps = 4/425 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M  K    +V T++ ++  L K    E++  V+ EM     +P+   +N  + G+ R N 
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           ++KA  ++  M  +G +P+ V+++IL+H L K G L +++K L E++       T  +  
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQ---TPSMQA 117

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            + L+ +  K      A +L+++M +     D + +  LI G C  G +  A   F QM 
Sbjct: 118 YSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMP 177

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           K G  P+V  YN LL+ LC  G+L++A+  +  +     +PD ++Y T++  +C    + 
Sbjct: 178 KHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVE 237

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +  +   +M     VP    ++ +I G  R G+L  A  +   ML  G   N +T+  LI
Sbjct: 238 EGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLI 297

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML-RRGI 502
               R   +  A  L ++M    I PD   YN LI   C  G +  A +LY EM    G+
Sbjct: 298 SGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGL 357

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            P I+T+  LI G C  G +  A E+ A++ T GLA D   +RIL     R  + D+A +
Sbjct: 358 QPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALE 417

Query: 563 IHQKW 567
           ++++ 
Sbjct: 418 VYKQM 422



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 211/437 (48%), Gaps = 13/437 (2%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A  + + M++ G  PD ++++ L++ L KIG L+++  ++ EM     +P+   Y++ + 
Sbjct: 64  AREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVR 123

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
              +   +D A  LF  M   G  P+R+    L+  LC+ G + DA +   ++       
Sbjct: 124 ALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG--- 180

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              +V    +L+     +G   QA  L+ +M   +   D+V YN L++  C    +    
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F  M   G++P+VIT++TL++ LC+ G+L++A   +G + + G  P++ +Y T+I GL
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSN 435
           C    +++ARE    M +  + P+   +N +I GY + G +  A  + R++    G+   
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 360

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           + TFN LI    + G +  A  L  EM   G+  D  TY +LI        +  AL++Y 
Sbjct: 361 IVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYK 420

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---- 551
           +M  +    D ++    + G C  GN+ +A  VF   +  G   +   FRIL +      
Sbjct: 421 QMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLG 480

Query: 552 -----RRMKESDKARDI 563
                +++ E  KARDI
Sbjct: 481 RVEDAQKLMEPAKARDI 497



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 201/423 (47%), Gaps = 4/423 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I+ L    K   +  +  +M+  G  PDV   N ++    +  ++EKA  V + M 
Sbjct: 13  YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 72

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    P+  +Y+  I G  ++ +LD++L + S M   G  P+   ++ LV AL K   + 
Sbjct: 73  ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVD 132

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A     E++    G    D +    L+    + G    A   +  M +   Q ++  YN
Sbjct: 133 HASSLFDEMI---RGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYN 189

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           VL++G C +G +  A   F +M      PDV+TYNTLL+ +CK  +++E    +  +   
Sbjct: 190 VLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAA 249

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  P+ I++ T+I GLC  G++ KA E   SMLE    P  + +  +I G  R   +  A
Sbjct: 250 GYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQA 309

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIG 479
             + + M    +  +   +N+LI    + GS+ +A  L +EM    G+ P + T+N LI 
Sbjct: 310 RELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLID 369

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C LG +  A +L  EM  +G+  D  TY  LI G      + EA EV+ +++     +
Sbjct: 370 GFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLL 429

Query: 540 DHI 542
           D +
Sbjct: 430 DPV 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 193/411 (46%), Gaps = 12/411 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  L   GK+  +L +  +M+ +G  P +  ++ LV  L K   ++ A  +  EM    
Sbjct: 86  LIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGG 145

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   +   I G C+  ++  A   F  M  +G +PN   +N+L+H LC  G L  A 
Sbjct: 146 HHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQAN 205

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+ +      + DV+T   L+D+  K     +   L+  M       +++ ++ LI
Sbjct: 206 TLFAEMKSHS---CSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLI 262

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G++  A   F  ML+ G  P+  TY TL++ LC+  K+ +A   +  +++  + 
Sbjct: 263 HGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIP 322

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSM-----LEKSVVPEPHIWNVIIDGYGRCGDLS 418
           PD ++Y ++I G C  G + +A +    M     L+ ++V     +N +IDG+ + G L 
Sbjct: 323 PDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIV----TFNTLIDGFCKLGKLG 378

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   M + G++++  T+  LI   +R   + +A  + K+M       D  +    +
Sbjct: 379 RANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFV 438

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           G  C  G+I  A  +++   + G  P+  T+  L +     G +++A+++ 
Sbjct: 439 GGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 489



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 178/384 (46%), Gaps = 4/384 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + +++R L    ++  A  L  +MI+ G  PD L    L+  LC+ G ++ A    ++M 
Sbjct: 118 YSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMP 177

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN   YN  + G C   +L++A  LF+ M ++   P+ VT+N L+ A+CK   + 
Sbjct: 178 KHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVE 237

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +  K    + A        +VIT + L+    + G+  +AL ++  M +   + +   Y 
Sbjct: 238 EGCKLFEAMRA---AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYT 294

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS-K 359
            LI+G C    +  A   F +M +    PD + YN+L+   CK+G +DEA   Y  +S  
Sbjct: 295 TLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 354

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ P  +++ T+I G C  G + +A E +  M  K +  +   + ++I G  R   L  
Sbjct: 355 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDE 414

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +   M       +  +  + +    + G+I  A+++ +     G  P+  T+ +L  
Sbjct: 415 ALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSE 474

Query: 480 ASCNLGHIHLALQLYDEMLRRGIT 503
           +   LG +  A +L +    R IT
Sbjct: 475 SLIKLGRVEDAQKLMEPAKARDIT 498



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/137 (21%), Positives = 68/137 (49%)

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +++NVFT++++I +  +     +++ + +EM+  G  PDVF +N ++       ++  A 
Sbjct: 6   IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           ++Y  M+  G  PD ++Y  LI G    G + E+ ++ +++   G       +  L +  
Sbjct: 66  EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125

Query: 552 RRMKESDKARDIHQKWL 568
            + +  D A  +  + +
Sbjct: 126 AKARRVDHASSLFDEMI 142



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 24/106 (22%), Positives = 54/106 (50%)

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           I  +VFTY+ +I +         + ++ +EM+  G  PD+  +  +++G     NM++A 
Sbjct: 6   IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           EV+  +   G   D++ + IL     ++ + D++  I  + ++R +
Sbjct: 66  EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQ 111


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 212/431 (49%), Gaps = 35/431 (8%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           ++++ G  PDV ++N L++   K G+++KA  +  +M E    PN  TY++ I G C+  
Sbjct: 143 RLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTK 202

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE----VLADDDGKAT 258
           E+DKA  +   M   G+RPN +T+N L+H     G+  ++V+   E    +L  D G   
Sbjct: 203 EMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCN 262

Query: 259 S----------------------------DVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           S                            DVI+   L+  Y   G       L+N M  +
Sbjct: 263 SFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCE 322

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            +  D   +N LIN +   G +  +   F  M K+G  PD+IT++T+++  C+ G+LD+A
Sbjct: 323 GVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDA 382

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVII 408
              +  +  TGV PD   Y  +IQG C   D+VKA+E +  ML K  +P P I  +  II
Sbjct: 383 MEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG-IPPPCIKFFTSII 441

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           +   + G ++    + DL++  G   N+ TFN+L+      G++ +A  L   M   G+ 
Sbjct: 442 NNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVE 501

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PD++TYN L+   C  G I  AL L+ +ML + +T   ++Y  ++ G         A+E+
Sbjct: 502 PDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEM 561

Query: 529 FAKIQTLGLAI 539
           F ++   G+A+
Sbjct: 562 FHEMIESGMAV 572



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 184/420 (43%), Gaps = 39/420 (9%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           +P   TYN  I  Y R    D  L +F  +   G+ P+  ++N L+    K+G +  A  
Sbjct: 115 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 174

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              ++   ++     +V+T + L++   K  +  +A  +   M    ++ + + YN LI+
Sbjct: 175 LFYKM---EEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIH 231

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G+  +G    +   F +M     +PDV   N+ +  LCK G++ EA   +  +   G  P
Sbjct: 232 GYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKP 291

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D ISY  ++ G    G I         M+ + VVP+ H++N +I+ Y R G +  +  + 
Sbjct: 292 DVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMF 351

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           + M   GV+ ++ TF+ +I A  R G + DA      M+  G+ PD   Y+ LI   CN 
Sbjct: 352 EDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 411

Query: 485 GHIHLALQLYDEMLRRGITP------------------------------------DIIT 508
             +  A +L  +ML +GI P                                    ++IT
Sbjct: 412 RDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLIT 471

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +  L+ G+C  GNMKEA  +   ++++G+  D   +  L   Y +    D A  + +  L
Sbjct: 472 FNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDML 531



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 204/446 (45%), Gaps = 11/446 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           +KE  D   +M   GP     + D   + A++      G I     L   M+ +G VPD 
Sbjct: 274 IKEARDIFDSMVLKGP-----KPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDR 328

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
              N L+N   ++G ++K+  +  +M++   +P+  T++  I+ +CR+  LD A+  F+ 
Sbjct: 329 HVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNH 388

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M + G+ P+   ++ L+   C +  L  A + + ++L+           TS I  ++  K
Sbjct: 389 MIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSII--NNLCK 446

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +   + + +     + +++ +N L++G+CL G++  A      M   G  PD+ T
Sbjct: 447 EGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYT 506

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YNTL++  CK G++D+A   +  +    V    +SY  I+ GL      + A+E    M+
Sbjct: 507 YNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMI 566

Query: 394 EKSVVPEPHIWNVIIDGYGR--CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           E  +    H +  ++ G  R  C D +N   + + + S  V  ++ TFN +I A  + G 
Sbjct: 567 ESGMAVSIHTYATVLGGLCRNNCTDEANM--LLEKLFSMNVKFDILTFNIVIRAMFKVGR 624

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
             +A  L   +   G+ P + TY ++I           A  L+  M +   TPD     E
Sbjct: 625 RQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNE 684

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGL 537
           +I+    +G + +A    +KI   G+
Sbjct: 685 IIRMLLNKGEVAKAGNYLSKIDKKGI 710



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 190/412 (46%), Gaps = 14/412 (3%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  G+I  A  +   M+ KG  PDV+++  L++     G +   D++   M      P+
Sbjct: 268 LCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPD 327

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
              +N  I  Y R+  +DK+L +F  M   G+ P+ +T + ++ A C+ G L DA++   
Sbjct: 328 RHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFN 387

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY-NVLINGF 306
            ++   D     D    + L+       D  +A  L +DM  K I    + +   +IN  
Sbjct: 388 HMI---DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNL 444

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C  G ++        ++  G  P++IT+N+L++  C  G + EA      +   GV PD 
Sbjct: 445 CKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDI 504

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
            +Y T++ G C HG I  A      ML K V      +N+I+ G  +      A  +   
Sbjct: 505 YTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHE 564

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP-----DVFTYNLLIGAS 481
           M+  G++ ++ T+  ++     GG   +  + +  MLL+ +F      D+ T+N++I A 
Sbjct: 565 MIESGMAVSIHTYATVL-----GGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAM 619

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
             +G    A +L+  +   G+ P I+TY  +I       + ++A+ +F+ ++
Sbjct: 620 FKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 671



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 160/324 (49%), Gaps = 35/324 (10%)

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           +A   + T  IL++ Y +       L ++  + +  +  D+ +YN LI+GF   G++  A
Sbjct: 113 EAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKA 172

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F +M ++G +P+V+TY++L+N LCK  ++D+A      +   GV P+ ++Y  +I G
Sbjct: 173 HDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHG 232

Query: 376 -----------------------------------LCIHGDIVKAREFLLSMLEKSVVPE 400
                                              LC HG I +AR+   SM+ K   P+
Sbjct: 233 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 292

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +  ++ GY   G ++   ++ ++M+  GV  +   FN LI A  R G +  +  + +
Sbjct: 293 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFE 352

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           +M   G+ PD+ T++ +I A C LG +  A++ ++ M+  G+ PD   Y+ LI+G C R 
Sbjct: 353 DMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRR 412

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPF 544
           ++ +A+E+ + + + G+    I F
Sbjct: 413 DLVKAKELISDMLSKGIPPPCIKF 436


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 218/436 (50%), Gaps = 7/436 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LCL G++  A  L  KM+ KG   DV+T+  +VN +CK+GD + A +++ +M E 
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   Y+A I   C+      A +LFS M   GI PN  T+N ++   C  G   DA
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +++   + +   DV+T   L+ +  K G  F+A  L ++M  + I  D V YN +
Sbjct: 351 QRLLRDMI---EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I GFC +     A   F  M      PDV+T+NT+++  C+  ++DE       +S+ G+
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             +  +Y T+I G C   ++  A++    M+   V P+    N+++ G+     L  A  
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + +++    +  +   +N +I    +G  + +A+ L   + + G+ PDV TYN++I   C
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               I  A  L+ +M   G  PD  TY  LI+G    G + ++ E+ +++++ G + D  
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643

Query: 543 PFRILKKRYRRMKESD 558
             ++ ++   R+ + +
Sbjct: 644 TIKMAEEIICRVSDEE 659



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 192/412 (46%), Gaps = 27/412 (6%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N ++    ++   + A  + R+M   R   N  ++N  I  +C  ++L  +L  F  +  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G +P+ VT N L+H LC +  + +A+   G                       Y     
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFG-----------------------YMVETG 206

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A+AL++ M +  +   ++ +N LING CL G +  A A   +M+ +G   DV+TY T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           ++N +CK G    A +    + +T + PD + Y  II  LC  G    A+     MLEK 
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           + P    +N +IDG+   G  S+A  +   M+   ++ +V TFNALI A  + G +F+A 
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L  EML   IFPD  TYN +I   C       A  ++D M     +PD++T+  +I  +
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVY 442

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           C    + E  ++  +I   GL  +   +  L   +  +   + A+D+ Q+ +
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 213/444 (47%), Gaps = 24/444 (5%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
            A+ L RKM  +    ++ + N L+   C    L  +     +++++   P+  T+N  +
Sbjct: 124 VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183

Query: 196 TGYCRVNELDKALHLFSTMANN---------------GIRPNRVTHNILVHALCKKGLLG 240
            G C  + + +AL LF  M                  G+ P  +T N L++ LC +G + 
Sbjct: 184 HGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVL 243

Query: 241 DAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           +A   + +++    GK    DV+T   +++   K GD   AL L + M + +I+ D+V Y
Sbjct: 244 EAAALVNKMV----GKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           + +I+  C +G  S A   F +ML++G  P+V TYN +++  C  G+  +A      + +
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
             + PD +++  +I      G + +A +    ML + + P+   +N +I G+ +     +
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  + DLM     S +V TFN +I    R   + +   L +E+   G+  +  TYN LI 
Sbjct: 420 AKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH 475

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C + +++ A  L+ EM+  G+ PD IT   L+ G C    ++EA E+F  IQ   + +
Sbjct: 476 GFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDL 535

Query: 540 DHIPFRILKKRYRRMKESDKARDI 563
           D + + I+     +  + D+A D+
Sbjct: 536 DTVAYNIIIHGMCKGSKVDEAWDL 559



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 177/391 (45%), Gaps = 28/391 (7%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  ++  +C  G   +AL L  KM +    PDV+ ++ +++ LCK G    A 
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           ++  EM E   +PN  TYN  I G+C       A  L   M    I P+ +T N L+ A 
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376

Query: 234 CKKGLLGDAVKFLGEVLAD----------------------DDGK------ATSDVITST 265
            K+G L +A K   E+L                        DD K      A+ DV+T  
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFN 436

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            ++D Y +     + + L  ++ ++ +  +   YN LI+GFC   ++++A   F +M+  
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  PD IT N LL   C+  KL+EA   + V+  + +  D ++Y  II G+C    + +A
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            +   S+    V P+   +NV+I G+     +S+A  +   M   G   +  T+N LI  
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
             + G I  +  L  EM  +G   D FT  +
Sbjct: 617 CLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 235/508 (46%), Gaps = 75/508 (14%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++   L   R ++++G VP ++  N ++  LC    +  A      M    PSPN  T+
Sbjct: 219 GEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTF 278

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  I  YC+   LD+A  L++ M   GI P+ V ++IL++ L + G L +        LA
Sbjct: 279 STLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALA 338

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   DV+  + +MD+Y + GD  +A+ ++  M ++ I  ++V Y++LING C NG 
Sbjct: 339 RG---VKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGR 395

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK---------------------------- 343
           +  A   F Q+LK+G  P V+TY++L++  CK                            
Sbjct: 396 VLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSM 455

Query: 344 -------QGKLDEASHFYGVLSKTG----------------------------------- 361
                  QG +DEA  F+    K G                                   
Sbjct: 456 LINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYK 515

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V PD ++Y  +++GL   G + +A      +L+K   P+  I+  +IDG+ +  D +   
Sbjct: 516 VIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGL 575

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            I  LM S G+  ++  +N LI    R G + +   L +E++  G+ PD+ TYN +I   
Sbjct: 576 QIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGY 635

Query: 482 CNLGHIHLALQLYDEMLRRGIT-PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           C+L     A++L+ E+L+ G T P+ IT+T LI  +C  G M +A  +F+ +   G   +
Sbjct: 636 CSLKIFSKAIKLF-EVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPN 694

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWL 568
            + +  L   Y + + ++ A ++++K L
Sbjct: 695 ILTYSCLIDGYFKTENTESAFELYEKML 722



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 212/443 (47%), Gaps = 32/443 (7%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +G A+ +  +M+++G  P+V+T++ L+N LC+ G + +A  V  ++ +    P+  TY
Sbjct: 359 GDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTY 418

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL- 250
           ++ I G+C+   L     L+  M   G  P+ V  ++L++ L ++G++ +A++F  + + 
Sbjct: 419 SSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVK 478

Query: 251 -----------ADDDG--------------------KATSDVITSTILMDSYFKNGDKFQ 279
                      A  DG                    K   DV+T T+L+    + G   +
Sbjct: 479 RGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDE 538

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           ALAL+  + +K    D + Y  LI+GFC   D ++    F  M   G  PD+  YN L+N
Sbjct: 539 ALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLIN 598

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
              ++G ++        + K G+ PD ++Y T+I G C      KA +    +      P
Sbjct: 599 MFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQP 658

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               + ++ID Y + G + +A  I   ML  G   N+ T++ LI    +  +   AF L 
Sbjct: 659 NAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELY 718

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           ++ML D + P++ +Y++LI   C  G +  A   +   + R + PD+I Y  LI+G+C  
Sbjct: 719 EKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKV 778

Query: 520 GNMKEAEEVFAKIQTLGLAIDHI 542
           G + EA  ++  +   G+  D +
Sbjct: 779 GRLAEAMMLYDHMLVNGIMPDDL 801



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 196/399 (49%), Gaps = 3/399 (0%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
            + ++ N   K G++EK  +  R + E    P     N  + G C  N++  A   F  M
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
             +G  PN VT + L++  CK+  L +A      ++   +     D++  +IL++  F+ 
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMI---EKGIVPDLVIYSILINGLFRA 323

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +  +L++    + ++ D+V ++ +++ +   GD+  A   + +MLK G  P+V+TY
Sbjct: 324 GKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTY 383

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           + L+N LC+ G++ EA   +G + K G+ P  ++Y ++I G C   ++         ML 
Sbjct: 384 SILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLR 443

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K  VP+  + +++I+G  R G +  A       +  G++ N + FNALI    R     D
Sbjct: 444 KGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRD 503

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
              +   M +  + PDV TY +L+      G +  AL L+ ++L++G +PD I Y  LI 
Sbjct: 504 GLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLID 563

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           G C + +     ++F  +Q+ G+  D   + +L   + R
Sbjct: 564 GFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFR 602



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 188/394 (47%), Gaps = 7/394 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE     + ++I   C    +     L   M++KG VPDV+  + L+N L + G +++A 
Sbjct: 411 LEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEAL 470

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
               +  +   + N   +NA I G  R+      L ++  M    + P+ VT+ +LV  L
Sbjct: 471 RFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGL 530

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            ++G L +A+    ++L       + D I    L+D + K  D    L ++  M    I 
Sbjct: 531 AEQGRLDEALALFFQLLKKG---FSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIF 587

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DI  YNVLIN F   G + +      +++K G  PD++TYNT++   C      +A   
Sbjct: 588 PDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKL 647

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGY 411
           + VL      P+ I++  +I   C  G +  A     SMLE+   PEP+I  ++ +IDGY
Sbjct: 648 FEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERG--PEPNILTYSCLIDGY 705

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +  +  +AF + + ML   VS N+ +++ LI    + G + +A    +  +   + PDV
Sbjct: 706 FKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDV 765

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             Y +LI   C +G +  A+ LYD ML  GI PD
Sbjct: 766 IAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 195/405 (48%), Gaps = 12/405 (2%)

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           + G+LE              +P+   Y+  +  YCR   +D+A+  F+ M+  G+    +
Sbjct: 118 QFGNLEVLGEFHGSFRNYGSNPS-TVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVS---I 173

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           +H      L    LL D+ +   +V+ ++  +    +     + +S+ K G+  + L   
Sbjct: 174 SHYAASEML---DLLIDSDRI--DVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFH 228

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
             + ++ +   IV  N ++ G C+   I  A  +F  M++ G  P+++T++TL+N  CK+
Sbjct: 229 RALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKE 288

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
            +LDEA   Y ++ + G+ PD + Y  +I GL   G + +        L + V  +  I+
Sbjct: 289 LRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIF 348

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           + I+D Y R GDL  A  +   ML  G+S NV T++ LI    R G + +A  +  ++L 
Sbjct: 349 SSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILK 408

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            G+ P V TY+ LI   C   ++     LY  MLR+G  PD++  + LI G   +G M E
Sbjct: 409 QGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDE 468

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
           A   F +    GL +++  F  L     R+K   + RD  + ++L
Sbjct: 469 ALRFFFQAVKRGLTLNNYLFNALIDGCFRLK---RTRDGLKMYIL 510



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 125/258 (48%), Gaps = 3/258 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D+  +  +I   C      T L + + M   G  PD+  +N L+N   + G +E    ++
Sbjct: 554 DHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELL 613

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           RE+ +    P+  TYN  I GYC +    KA+ LF  +     +PN +T  IL+ A CK 
Sbjct: 614 REIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKD 673

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + DA+     +L   +     +++T + L+D YFK  +   A  L+  M    +  +I
Sbjct: 674 GRMDDAMLIFSSML---ERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNI 730

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V+Y++LI+G C  G +  A   F   + R  LPDVI Y  L+   CK G+L EA   Y  
Sbjct: 731 VSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDH 790

Query: 357 LSKTGVAPDQISYKTIIQ 374
           +   G+ PD +  K + +
Sbjct: 791 MLVNGIMPDDLLQKALAE 808


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 235/508 (46%), Gaps = 75/508 (14%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++   L   R ++++G VP ++  N ++  LC    +  A      M    PSPN  T+
Sbjct: 219 GEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTF 278

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  I  YC+   LD+A  L++ M   GI P+ V ++IL++ L + G L +        LA
Sbjct: 279 STLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALA 338

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   DV+  + +MD+Y + GD  +A+ ++  M ++ I  ++V Y++LING C NG 
Sbjct: 339 RG---VKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGR 395

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK---------------------------- 343
           +  A   F Q+LK+G  P V+TY++L++  CK                            
Sbjct: 396 VLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSM 455

Query: 344 -------QGKLDEASHFYGVLSKTG----------------------------------- 361
                  QG +DEA  F+    K G                                   
Sbjct: 456 LINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYK 515

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V PD ++Y  +++GL   G + +A      +L+K   P+  I+  +IDG+ +  D +   
Sbjct: 516 VIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGL 575

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            I  LM S G+  ++  +N LI    R G + +   L +E++  G+ PD+ TYN +I   
Sbjct: 576 QIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGY 635

Query: 482 CNLGHIHLALQLYDEMLRRGIT-PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           C+L     A++L+ E+L+ G T P+ IT+T LI  +C  G M +A  +F+ +   G   +
Sbjct: 636 CSLKIFSKAIKLF-EVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPN 694

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWL 568
            + +  L   Y + + ++ A ++++K L
Sbjct: 695 ILTYSCLIDGYFKTENTESAFELYEKML 722



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 212/443 (47%), Gaps = 32/443 (7%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +G A+ +  +M+++G  P+V+T++ L+N LC+ G + +A  V  ++ +    P+  TY
Sbjct: 359 GDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTY 418

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL- 250
           ++ I G+C+   L     L+  M   G  P+ V  ++L++ L ++G++ +A++F  + + 
Sbjct: 419 SSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVK 478

Query: 251 -----------ADDDG--------------------KATSDVITSTILMDSYFKNGDKFQ 279
                      A  DG                    K   DV+T T+L+    + G   +
Sbjct: 479 RGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDE 538

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           ALAL+  + +K    D + Y  LI+GFC   D ++    F  M   G  PD+  YN L+N
Sbjct: 539 ALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLIN 598

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
              ++G ++        + K G+ PD ++Y T+I G C      KA +    +      P
Sbjct: 599 MFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQP 658

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               + ++ID Y + G + +A  I   ML  G   N+ T++ LI    +  +   AF L 
Sbjct: 659 NAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELY 718

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           ++ML D + P++ +Y++LI   C  G +  A   +   + R + PD+I Y  LI+G+C  
Sbjct: 719 EKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKV 778

Query: 520 GNMKEAEEVFAKIQTLGLAIDHI 542
           G + EA  ++  +   G+  D +
Sbjct: 779 GRLAEAMMLYDHMLVNGIMPDDL 801



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 196/399 (49%), Gaps = 3/399 (0%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
            + ++ N   K G++EK  +  R + E    P     N  + G C  N++  A   F  M
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM 266

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
             +G  PN VT + L++  CK+  L +A      ++   +     D++  +IL++  F+ 
Sbjct: 267 VRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMI---EKGIVPDLVIYSILINGLFRA 323

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +  +L++    + ++ D+V ++ +++ +   GD+  A   + +MLK G  P+V+TY
Sbjct: 324 GKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTY 383

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           + L+N LC+ G++ EA   +G + K G+ P  ++Y ++I G C   ++         ML 
Sbjct: 384 SILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLR 443

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K  VP+  + +++I+G  R G +  A       +  G++ N + FNALI    R     D
Sbjct: 444 KGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRD 503

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
              +   M +  + PDV TY +L+      G +  AL L+ ++L++G +PD I Y  LI 
Sbjct: 504 GLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLID 563

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           G C + +     ++F  +Q+ G+  D   + +L   + R
Sbjct: 564 GFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFR 602



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 188/394 (47%), Gaps = 7/394 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE     + ++I   C    +     L   M++KG VPDV+  + L+N L + G +++A 
Sbjct: 411 LEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEAL 470

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
               +  +   + N   +NA I G  R+      L ++  M    + P+ VT+ +LV  L
Sbjct: 471 RFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGL 530

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            ++G L +A+    ++L       + D I    L+D + K  D    L ++  M    I 
Sbjct: 531 AEQGRLDEALALFFQLLKKG---FSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIF 587

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DI  YNVLIN F   G + +      +++K G  PD++TYNT++   C      +A   
Sbjct: 588 PDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKL 647

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGY 411
           + VL      P+ I++  +I   C  G +  A     SMLE+   PEP+I  ++ +IDGY
Sbjct: 648 FEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERG--PEPNILTYSCLIDGY 705

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +  +  +AF + + ML   VS N+ +++ LI    + G + +A    +  +   + PDV
Sbjct: 706 FKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDV 765

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             Y +LI   C +G +  A+ LYD ML  GI PD
Sbjct: 766 IAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 187/381 (49%), Gaps = 11/381 (2%)

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             Y+  +  YCR   +D+A+  F+ M+  G+    ++H      L    LL D+ +   +
Sbjct: 141 TVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVS---ISHYAASEML---DLLIDSDRI--D 192

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           V+ ++  +    +     + +S+ K G+  + L     + ++ +   IV  N ++ G C+
Sbjct: 193 VILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCM 252

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
              I  A  +F  M++ G  P+++T++TL+N  CK+ +LDEA   Y ++ + G+ PD + 
Sbjct: 253 GNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVI 312

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I GL   G + +        L + V  +  I++ I+D Y R GDL  A  +   ML
Sbjct: 313 YSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRML 372

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G+S NV T++ LI    R G + +A  +  ++L  G+ P V TY+ LI   C   ++ 
Sbjct: 373 KEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLR 432

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
               LY  MLR+G  PD++  + LI G   +G M EA   F +    GL +++  F  L 
Sbjct: 433 DGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALI 492

Query: 549 KRYRRMKESDKARDIHQKWLL 569
               R+K   + RD  + ++L
Sbjct: 493 DGCFRLK---RTRDGLKMYIL 510



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 125/258 (48%), Gaps = 3/258 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D+  +  +I   C      T L + + M   G  PD+  +N L+N   + G +E    ++
Sbjct: 554 DHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELL 613

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           RE+ +    P+  TYN  I GYC +    KA+ LF  +     +PN +T  IL+ A CK 
Sbjct: 614 REIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKD 673

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + DA+     +L   +     +++T + L+D YFK  +   A  L+  M    +  +I
Sbjct: 674 GRMDDAMLIFSSML---ERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNI 730

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V+Y++LI+G C  G +  A   F   + R  LPDVI Y  L+   CK G+L EA   Y  
Sbjct: 731 VSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDH 790

Query: 357 LSKTGVAPDQISYKTIIQ 374
           +   G+ PD +  K + +
Sbjct: 791 MLVNGIMPDDLLQKALAE 808



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 176/351 (50%), Gaps = 15/351 (4%)

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAV---KFLGEVLADDDGKATSDVITSTILMD 269
           +  N G  P+ V ++ L+H  C+ G++  AV    ++ ++       A S+++   +L+D
Sbjct: 131 SFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLD--LLID 187

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
           S     D+   +    +   K +      Y  + N F   G++     +   +++RG +P
Sbjct: 188 S-----DRIDVILENYEEMCKGLGV----YEFVFNSFLKRGEVEKGLNFHRALVERGLVP 238

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
            ++  N +L  LC   ++  AS F+ ++ ++G +P+ +++ T+I   C    + +A    
Sbjct: 239 KIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLY 298

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M+EK +VP+  I++++I+G  R G L    S+  + L+ GV  +V  F++++ A  R 
Sbjct: 299 NLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRV 358

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G +  A  +   ML +GI P+V TY++LI   C  G +  A  ++ ++L++G+ P ++TY
Sbjct: 359 GDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTY 418

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           + LI G C   N+++   ++  +   G   D +   +L     R    D+A
Sbjct: 419 SSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEA 469


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 213/425 (50%), Gaps = 7/425 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI   C+ G+   AL     MI++G  P V+T N ++N  CK G++ +A  +   + EM 
Sbjct: 307 VINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMG 366

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SPN   YN  + GY ++ E+D+A  L+  M   GI P+ +T NILV    K G   D  
Sbjct: 367 FSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGD 426

Query: 244 KFLGE--VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           + L +  VL     ++  D+  S +        G   +A+    DM +K +   I+A+N 
Sbjct: 427 RLLKDISVLGLLPDRSLFDISVSGLCW-----AGRLDEAMEFLMDMLEKGLSPSIIAFNS 481

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +I  +   G    AF  +  M+  G  P   T ++LL  L   G+L EA+   G + + G
Sbjct: 482 VIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKG 541

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           ++ + +++  ++      GD+V A+     M  + + P+   ++  IDG  + G +  A+
Sbjct: 542 LSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAY 601

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           ++   ML  G+  N F +N+LI    + G + +A  L+K M   G+ PD+FT N++IG  
Sbjct: 602 NVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGL 661

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C  G +  A+ ++ +M + G++PDIITY  LI G+C   +M  A+ +  ++   G   D 
Sbjct: 662 CKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDL 721

Query: 542 IPFRI 546
             + I
Sbjct: 722 TTYNI 726



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 224/492 (45%), Gaps = 45/492 (9%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLG-GKIGTALWLRRKMIQKGTVPDVL 154
           + L+ L  MR+ G VR +        VA++  L L  G  G    L + +I++G  P   
Sbjct: 214 QALEILGRMREVG-VRPSASG-----VAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKY 267

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T + ++   C+ G +   + ++  M +    PN   YN  I   C       AL  F+ M
Sbjct: 268 TFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLM 327

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G  P  VT N +++A CK+G + +A K    +    +   + + I    LM+ Y K 
Sbjct: 328 IERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL---KEMGFSPNAIMYNTLMNGYVKM 384

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVL-------------------------------- 302
            +  QA  L+ +M +K I  D + +N+L                                
Sbjct: 385 REIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLF 444

Query: 303 ---INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
              ++G C  G +  A  +   ML++G  P +I +N+++    + G  D+A   Y ++  
Sbjct: 445 DISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVH 504

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ P   +  +++ GL I+G + +A E +  M+EK +      + V++D + + GD+  
Sbjct: 505 FGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVG 564

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A S+   M   G+  +V  F+A I   ++ G + +A+++  EML  G+ P+ F YN LI 
Sbjct: 565 AQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLIC 624

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C  G ++ AL+L   M  RG+ PDI T   +I G C +G M+ A  VF  +   GL+ 
Sbjct: 625 GFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSP 684

Query: 540 DHIPFRILKKRY 551
           D I +  L   Y
Sbjct: 685 DIITYNTLINGY 696



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 155/321 (48%), Gaps = 11/321 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  L + G++  A  L  +MI+KG   + +    L+++  K GD+  A  +  EM   
Sbjct: 516 SLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR 575

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   ++AFI G  +   +++A ++F  M   G+ PN   +N L+   CK G L +A
Sbjct: 576 GIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEA 635

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K   E +    G    D+ T+ +++    K G    A+ ++ DM Q  +  DI+ YN L
Sbjct: 636 LKL--EKVMRHRG-LLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTL 692

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING+C   D+ +A     +M   G  PD+ TYN  ++  C   +++ A      L   G+
Sbjct: 693 INGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGI 752

Query: 363 APDQISYKTIIQGLCIHGDIV-KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
            P+ ++Y +++ G+C   DI+ +A      +L+ + VP     N+++  + + G      
Sbjct: 753 VPNTVTYNSMLNGVC--SDILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQG-----M 805

Query: 422 SIRDLMLSFGVSSNVFTFNAL 442
             R LM    +S   + F+ +
Sbjct: 806 PERTLMWGHKLSEIPYAFDEI 826



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 127/275 (46%), Gaps = 37/275 (13%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A  L  +M ++G  PDV+  +  ++ L K G +E+A +V  EM      PN   Y
Sbjct: 560 GDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAY 619

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N+ I G+C+  +L++AL L   M + G+ P+  T N+++  LCK+G +  A+    ++  
Sbjct: 620 NSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDM-- 677

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC---- 307
                 + D+IT   L++ Y K  D   A  L N M+      D+  YN+ I+GFC    
Sbjct: 678 -HQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRR 736

Query: 308 --------------------------LNGDISS----AFAYFCQMLKRGFLPDVITYNTL 337
                                     LNG  S     A     ++LK  F+P+V+T N L
Sbjct: 737 MNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDILDRAMILTARLLKMAFVPNVVTANLL 796

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           L+   KQG  +    +   LS+   A D+I+YK +
Sbjct: 797 LSQFYKQGMPERTLMWGHKLSEIPYAFDEITYKIM 831



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/344 (22%), Positives = 143/344 (41%), Gaps = 6/344 (1%)

Query: 224 VTHNILVHALCKKGLL--GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           V  +++   + + G+L  GD V+F+            SD      LM ++      FQAL
Sbjct: 161 VAQDVIWWVIARIGVLRSGDLVEFMWR----GHHVYESDFSVLDSLMRAFVNAEMGFQAL 216

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            +   M +  ++       +L       GD  + +  F  +++RG  P   T++ ++   
Sbjct: 217 EILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGF 276

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           C++G +        ++ K    P+  +Y  +I   CI G    A  +   M+E+   P  
Sbjct: 277 CRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTV 336

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +N +I+ + + G++  A  + D +   G S N   +N L+    +   I  A  L +E
Sbjct: 337 VTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEE 396

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           M   GI PD  T+N+L+      G      +L  ++   G+ PD   +   + G C  G 
Sbjct: 397 MRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGR 456

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           + EA E    +   GL+   I F  +   Y +    DKA + ++
Sbjct: 457 LDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYK 500



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 88/183 (48%)

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A E L  M E  V P      ++     R GD  N + +   ++  G     +TF+ +I
Sbjct: 214 QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 273

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
           L   R G I    SL   M      P+ F YN++I A C  G    AL  ++ M+ RG  
Sbjct: 274 LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 333

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P ++T+  +I   C  GN+ EA ++F  ++ +G + + I +  L   Y +M+E D+A  +
Sbjct: 334 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 393

Query: 564 HQK 566
           +++
Sbjct: 394 YEE 396



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 41/180 (22%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L E L   K MR  G +     T+      +I  LC  G++ +A+ +   M Q G  PD+
Sbjct: 632 LNEALKLEKVMRHRGLLPDIFTTN-----MIIGGLCKQGRMRSAINVFMDMHQTGLSPDI 686

Query: 154 LTHNYLVNELCKIGDLEKADHVIREM--SEMRPS-------------------------- 185
           +T+N L+N  CK  D+  AD+++  M  S   P                           
Sbjct: 687 ITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDE 746

Query: 186 -------PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
                  PN  TYN+ + G C  + LD+A+ L + +      PN VT N+L+    K+G+
Sbjct: 747 LVSAGIVPNTVTYNSMLNGVCS-DILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGM 805


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 213/425 (50%), Gaps = 7/425 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LCL G++  A  L  KM+ KG   DV+T+  +VN +CK+GD + A +++ +M E 
Sbjct: 226 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 285

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   Y+A I   C+      A +LFS M   GI PN  T+N ++   C  G   DA
Sbjct: 286 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 345

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +++   + +   DV+T   L+ +  K G  F+A  L ++M  + I  D V YN +
Sbjct: 346 QRLLRDMI---EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 402

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I GFC +     A   F  M      PDV+T+NT+++  C+  ++DE       +S+ G+
Sbjct: 403 IYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 458

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             +  +Y T+I G C   ++  A++    M+   V P+    N+++ G+     L  A  
Sbjct: 459 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 518

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + +++    +  +   +N +I    +G  + +A+ L   + + G+ PDV TYN++I   C
Sbjct: 519 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 578

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               I  A  L+ +M   G  PD  TY  LI+G    G + ++ E+ +++++ G + D  
Sbjct: 579 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 638

Query: 543 PFRIL 547
             +++
Sbjct: 639 TIKMV 643



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 213/438 (48%), Gaps = 19/438 (4%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L RKM  +    ++ + N L+   C    L  +     +++++   P+  T+N  + 
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 197 GYCRVNELDKALHLFSTMANN----------GIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           G C  + + +AL LF  M             G+ P  +T N L++ LC +G + +A   +
Sbjct: 185 GLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 244

Query: 247 GEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
            +++    GK    DV+T   +++   K GD   AL L + M + +I+ D+V Y+ +I+ 
Sbjct: 245 NKMV----GKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDR 300

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C +G  S A   F +ML++G  P+V TYN +++  C  G+  +A      + +  + PD
Sbjct: 301 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 360

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            +++  +I      G + +A +    ML + + P+   +N +I G+ +     +A  + D
Sbjct: 361 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD 420

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
           LM     S +V TFN +I    R   + +   L +E+   G+  +  TYN LI   C + 
Sbjct: 421 LM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVD 476

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           +++ A  L+ EM+  G+ PD IT   L+ G C    ++EA E+F  IQ   + +D + + 
Sbjct: 477 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 536

Query: 546 ILKKRYRRMKESDKARDI 563
           I+     +  + D+A D+
Sbjct: 537 IIIHGMCKGSKVDEAWDL 554



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 187/398 (46%), Gaps = 11/398 (2%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N ++    ++   + A  + R+M   R   N  ++N  I  +C  ++L  +L  F  +  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD-------DGKATSDVITSTILMD 269
            G +P+ VT N L+H LC +  + +A+   G ++          +   T  VIT   L++
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLIN 229

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
                G   +A AL N M  K +  D+V Y  ++NG C  GD  SA     +M +    P
Sbjct: 230 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 289

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           DV+ Y+ +++ LCK G   +A + +  + + G+AP+  +Y  +I G C  G    A+  L
Sbjct: 290 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 349

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M+E+ + P+   +N +I    + G L  A  + D ML   +  +  T+N++I    + 
Sbjct: 350 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 409

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
               DA    K M      PDV T+N +I   C    +   +QL  E+ RRG+  +  TY
Sbjct: 410 NRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 465

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             LI G C   N+  A+++F ++ + G+  D I   IL
Sbjct: 466 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 503



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 203/434 (46%), Gaps = 17/434 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC----------KIGDLEKAD 173
           +I+  C   K+  +L    K+ + G  PDV+T N L++ LC            G + +  
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  +M E+  +P   T+N  I G C    + +A  L + M   G+  + VT+  +V+ +
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G    A+  L ++   ++     DV+  + ++D   K+G    A  L+++M +K I 
Sbjct: 267 CKMGDTKSALNLLSKM---EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 323

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++  YN +I+GFC  G  S A      M++R   PDV+T+N L++   K+GKL EA   
Sbjct: 324 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 383

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +    + PD ++Y ++I G C H     A+     M +    P+   +N IID Y R
Sbjct: 384 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH----MFDLMASPDVVTFNTIIDVYCR 439

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              +     +   +   G+ +N  T+N LI       ++  A  L +EM+  G+ PD  T
Sbjct: 440 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 499

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            N+L+   C    +  AL+L++ +    I  D + Y  +I G C    + EA ++F  + 
Sbjct: 500 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 559

Query: 534 TLGLAIDHIPFRIL 547
             G+  D   + ++
Sbjct: 560 IHGVEPDVQTYNVM 573



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 185/383 (48%), Gaps = 12/383 (3%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           K  L+ L  M +T      ++ D   + A+I  LC  G    A +L  +M++KG  P+V 
Sbjct: 273 KSALNLLSKMEET-----HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 327

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+N +++  C  G    A  ++R+M E   +P+  T+NA I+   +  +L +A  L   M
Sbjct: 328 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 387

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            +  I P+ VT+N +++  CK     DA           D  A+ DV+T   ++D Y + 
Sbjct: 388 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-------DLMASPDVVTFNTIIDVYCRA 440

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
               + + L  ++ ++ +  +   YN LI+GFC   ++++A   F +M+  G  PD IT 
Sbjct: 441 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 500

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N LL   C+  KL+EA   + V+  + +  D ++Y  II G+C    + +A +   S+  
Sbjct: 501 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 560

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             V P+   +NV+I G+     +S+A  +   M   G   +  T+N LI    + G I  
Sbjct: 561 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 620

Query: 455 AFSLKKEMLLDGIFPDVFTYNLL 477
           +  L  EM  +G   D FT  ++
Sbjct: 621 SIELISEMRSNGFSGDAFTIKMV 643



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 182/400 (45%), Gaps = 17/400 (4%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M   RP       N  I  + R+N  D A+ L+  M    I  N  + NIL+   C    
Sbjct: 97  MVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA----------LWNDMF 288
           L  ++   G++          DV+T   L+          +ALA          L++ M 
Sbjct: 157 LSFSLSTFGKLTK---LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMV 213

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           +  +   ++ +N LING CL G +  A A   +M+ +G   DV+TY T++N +CK G   
Sbjct: 214 EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTK 273

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            A +    + +T + PD + Y  II  LC  G    A+     MLEK + P    +N +I
Sbjct: 274 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 333

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           DG+   G  S+A  +   M+   ++ +V TFNALI A  + G +F+A  L  EML   IF
Sbjct: 334 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 393

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PD  TYN +I   C       A  ++D M     +PD++T+  +I  +C    + E  ++
Sbjct: 394 PDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQL 449

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             +I   GL  +   +  L   +  +   + A+D+ Q+ +
Sbjct: 450 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 489


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 199/394 (50%), Gaps = 6/394 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M  KG +PDV+    L+ E CKIG  + A  ++  + E     +  +YN  I  YC+  E
Sbjct: 95  MTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGE 154

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +++AL +     +  + PN  T++ ++ +LC +G L  A++ L   L     K   DV+T
Sbjct: 155 IEEALRVLD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQL---QSKCYPDVVT 208

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            T+L+D+  K     QA+ L+N+M  K  + D+V YNVLI GFC  G +  A  +  ++ 
Sbjct: 209 CTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLP 268

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G   DVI++N +L  LC  G+  +A      + + G  P  +++  +I  LC  G + 
Sbjct: 269 SYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLG 328

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           KA   L  M +    P    +N +I G+     +  A    ++M+S G   ++ T+N L+
Sbjct: 329 KALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILL 388

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            A  + G + DA  +  ++   G  P + +YN +I     +G   LA++L +EM  +G+ 
Sbjct: 389 TALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLK 448

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           PD+IT T ++ G    G + EA + F  ++  G+
Sbjct: 449 PDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGI 482



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 211/479 (44%), Gaps = 46/479 (9%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L+E    L+ M + G +      D     A+IR+ C  G+   A  +   + + G V D 
Sbjct: 85  LEEGSRFLEYMTNKGKI-----PDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDA 139

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA-------------------- 193
            ++N L+N  CK G++E+A   +R +     +PN ATY+A                    
Sbjct: 140 NSYNVLINAYCKSGEIEEA---LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDR 196

Query: 194 ---------------FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
                           I   C+ + + +A+ LF+ M   G +P+ VT+N+L+   CK+G 
Sbjct: 197 QLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGR 256

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L +A+ FL ++ +       SDVI+  +++ S    G    A+ L   M +K     +V 
Sbjct: 257 LDEAIIFLKKLPSYG---CQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVT 313

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           +N+LIN  C  G +  A      M K G  P+  ++N L+   C +  +D A     ++ 
Sbjct: 314 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMV 373

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G  PD ++Y  ++  LC  G +  A   L  +  K   P    +N +IDG  + G   
Sbjct: 374 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 433

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  + + M   G+  ++ T  +++   +R G + +A      +   GI P+ F YN ++
Sbjct: 434 LAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIM 493

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
              C      LA+    +M+  G  P   +YT LIKG    G  +EA ++  ++ + GL
Sbjct: 494 MGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGL 552



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 147/295 (49%), Gaps = 3/295 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           ++D   H  ++R LC GG+   A+ L   M++KG  P V+T N L+N LC+ G L KA +
Sbjct: 273 QSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALN 332

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+  M +   +PN  ++N  I G+C    +D+A+     M + G  P+ VT+NIL+ ALC
Sbjct: 333 VLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALC 392

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K G + DAV  L ++ +      +  +I+   ++D   K G    A+ L  +M  K ++ 
Sbjct: 393 KDGKVDDAVVILSQLSSKG---CSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKP 449

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D++    ++ G    G +  A  +F  +   G  P+   YN+++  LCK  +   A  F 
Sbjct: 450 DLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFL 509

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
             +   G  P + SY T+I+G+   G   +A +    +  + +V +  I  V  D
Sbjct: 510 VDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVKKSLIVKVSQD 564



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 155/340 (45%), Gaps = 9/340 (2%)

Query: 211 FSTMANNGIRPNRVTHNILVHALCK---KGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           FS  A NG+  +       +H LC+    G L +  +FL  +   + GK   DV+  T L
Sbjct: 54  FSKGALNGVNTSLNFEESEIHHLCRLIRNGELEEGSRFLEYM--TNKGK-IPDVVACTAL 110

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +  + K G    A  +   + +     D  +YNVLIN +C +G+I  A      +     
Sbjct: 111 IREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRV---LDHTSV 167

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+  TY+ +L  LC +GKL +A        ++   PD ++   +I   C    + +A +
Sbjct: 168 APNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMK 227

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M  K   P+   +NV+I G+ + G L  A      + S+G  S+V + N ++ +  
Sbjct: 228 LFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLC 287

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
            GG   DA  L   ML  G FP V T+N+LI   C  G +  AL + + M + G TP+  
Sbjct: 288 SGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSR 347

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++  LI+G C R  +  A E    + + G   D + + IL
Sbjct: 348 SFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNIL 387



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 3/289 (1%)

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            +NG+  +       M  K    D+VA   LI  FC  G   +A      + + G + D 
Sbjct: 80  IRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDA 139

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            +YN L+N  CK G+++EA     VL  T VAP+  +Y  ++  LC  G + +A + L  
Sbjct: 140 NSYNVLINAYCKSGEIEEALR---VLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDR 196

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
            L+    P+     V+ID   +   +  A  + + M   G   +V T+N LI    + G 
Sbjct: 197 QLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGR 256

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + +A    K++   G   DV ++N+++ + C+ G    A++L   MLR+G  P ++T+  
Sbjct: 257 LDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNI 316

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           LI   C +G + +A  V   +   G   +   F  L + +   K  D+A
Sbjct: 317 LINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRA 365


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 197/405 (48%), Gaps = 3/405 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M  +G  PDV+T N L+  LC+   +  A  ++ EMS    +P+  T+   + G+    
Sbjct: 185 EMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEG 244

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            ++ AL + + M   G  P RVT N+L++  CK G + DA+ ++ + +AD       D +
Sbjct: 245 SIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADG---FEPDQV 301

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T    +    +NG    AL + + M Q+    D+  YN +IN    NG++  A     QM
Sbjct: 302 TYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 361

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           + RG LPD  T+NTL+  LC Q +L+EA      L+  G++PD  ++  +I  LC  GD 
Sbjct: 362 VDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDP 421

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
                    M      P+   +N++ID     G L NA  +   M S G   +  T+N +
Sbjct: 422 HLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTI 481

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I A  +   I +A  +  +M   GI     T+N LI   C    I  A +L ++M++ G+
Sbjct: 482 IDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGL 541

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            P  ITY  ++  +C +G++K+A ++   +   G  ID + +  L
Sbjct: 542 QPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTL 586



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 215/463 (46%), Gaps = 22/463 (4%)

Query: 85  AVFNALDLILKENLDRLK-------TMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIG 135
           AV+N L  +L E   R+K        M D G  P   TL T       +I+ LC   ++ 
Sbjct: 161 AVYNHLLNVLAEG-SRMKLLESVYNEMTDRGIQPDVVTLNT-------LIKALCRAHQVR 212

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           TA+ +  +M      PD  T   L+    + G +E A  V  +M E   SP   T N  I
Sbjct: 213 TAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLI 272

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            GYC++  ++ AL        +G  P++VT+N  VH LC+ G +  A+K +  +L +   
Sbjct: 273 NGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHD 332

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               DV T   +++   KNG+  +A  + N M  +    D   +N LI   C    +  A
Sbjct: 333 ---PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEA 389

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                ++  +G  PDV T+N L+N LCK G        +  +  +G APD+++Y  +I  
Sbjct: 390 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDH 449

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHI-WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           LC  G +V A + LL  +E +  P   + +N IID   +   +  A  + D M + G+S 
Sbjct: 450 LCSMGKLVNALD-LLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISR 508

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +  TFN LI    +   I DA  L ++M+ +G+ P   TYN ++   C  G +  A  + 
Sbjct: 509 SAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADIL 568

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           + M   G   D++TY  LI G C  G  + A ++   ++  G+
Sbjct: 569 ETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGI 611



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 218/454 (48%), Gaps = 14/454 (3%)

Query: 100 RLKT-MRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           R+KT M +TG  P R T+         +I   C  G++  AL   +K I  G  PD +T+
Sbjct: 251 RVKTKMMETGCSPTRVTVNV-------LINGYCKMGRVEDALGYIQKEIADGFEPDQVTY 303

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N  V+ LC+ G +  A  V+  M +    P+  TYN  I    +  ELD+A  + + M +
Sbjct: 304 NTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVD 363

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G  P+  T N L+ ALC +  L +A+    E+        + DV T  IL+++  K GD
Sbjct: 364 RGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKG---LSPDVYTFNILINALCKVGD 420

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
               + L+ +M       D V YN+LI+  C  G + +A     +M   G     +TYNT
Sbjct: 421 PHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNT 480

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           +++ LCKQ +++EA   +  +   G++   +++ T+I GLC    I  A E +  M+++ 
Sbjct: 481 IIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG 540

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           + P    +N I+  Y + GDL  A  I + M + G   +V T+  LI    + G    A 
Sbjct: 541 LQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVAL 600

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L + M + GI P    YN +I +     ++  AL L+ EM   G  PD +TY  + +G 
Sbjct: 601 KLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGL 660

Query: 517 C-ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           C   G +KEA +   ++   G   +   FR+L +
Sbjct: 661 CRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAE 694



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 201/424 (47%), Gaps = 3/424 (0%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           +R ++   G   D   +N+L+N L +   ++  + V  EM++    P+  T N  I   C
Sbjct: 147 VRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALC 206

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R +++  A+ +   M+++ + P+  T   L+    ++G +  A++   +++   +   + 
Sbjct: 207 RAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMM---ETGCSP 263

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
             +T  +L++ Y K G    AL           + D V YN  ++  C NG +S A    
Sbjct: 264 TRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVM 323

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             ML+ G  PDV TYNT++NCL K G+LDEA      +   G  PD  ++ T+I  LC  
Sbjct: 324 DLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQ 383

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
             + +A +    +  K + P+ + +N++I+   + GD      + + M S G + +  T+
Sbjct: 384 NRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTY 443

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N LI      G + +A  L KEM  +G      TYN +I A C    I  A +++D+M  
Sbjct: 444 NILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDA 503

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            GI+   +T+  LI G C    + +A E+  ++   GL   +I +  +   Y +  +  K
Sbjct: 504 HGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKK 563

Query: 560 ARDI 563
           A DI
Sbjct: 564 AADI 567



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 218/490 (44%), Gaps = 19/490 (3%)

Query: 80  EGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALW 139
           + +P+A    L+  L           D  P R   E        +I+ L   G       
Sbjct: 66  QADPEAALQMLNSALAR--------EDFAPSRAVYE-------EIIQKLGTAGAFDLMEG 110

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR-EMSEMRPSPNCATYNAFITGY 198
           L R+M ++G           V    ++   + A  ++R +++      + A YN  +   
Sbjct: 111 LVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVL 170

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
              + +     +++ M + GI+P+ VT N L+ ALC+   +  AV  L E+         
Sbjct: 171 AEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEM---SSHAVA 227

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            D  T T LM  + + G    AL +   M +       V  NVLING+C  G +  A  Y
Sbjct: 228 PDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGY 287

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             + +  GF PD +TYNT ++CLC+ G +  A     ++ + G  PD  +Y T+I  L  
Sbjct: 288 IQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSK 347

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
           +G++ +A+  +  M+++  +P+   +N +I        L  A  +   +   G+S +V+T
Sbjct: 348 NGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYT 407

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           FN LI A  + G       L +EM   G  PD  TYN+LI   C++G +  AL L  EM 
Sbjct: 408 FNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEME 467

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             G     +TY  +I   C +  ++EAEEVF ++   G++   + F  L     + K  D
Sbjct: 468 SNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRID 527

Query: 559 KARDIHQKWL 568
            A ++ ++ +
Sbjct: 528 DATELIEQMV 537



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 177/363 (48%), Gaps = 4/363 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  L   G++  A  +  +M+ +G +PD  T N L+  LC    LE+A  + RE++   
Sbjct: 341 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKG 400

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP+  T+N  I   C+V +    + LF  M ++G  P+ VT+NIL+  LC  G L +A+
Sbjct: 401 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNAL 460

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E+  + +G   S V  +TI+ D+  K     +A  +++ M    I    V +N LI
Sbjct: 461 DLLKEM--ESNGCPRSTVTYNTII-DALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLI 517

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C    I  A     QM+K G  P  ITYN++L   CKQG L +A+     ++  G  
Sbjct: 518 DGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFE 577

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D ++Y T+I GLC  G    A + L  M  K + P P  +N +I    R  +L +A S+
Sbjct: 578 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSL 637

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGS-IFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
              M   G   +  T+  +     RGG  I +AF    EM+  G  P+  ++ +L     
Sbjct: 638 FREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLL 697

Query: 483 NLG 485
           NLG
Sbjct: 698 NLG 700



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 15/255 (5%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           LD LK M   G  R T+  +      +I  LC   +I  A  +  +M   G     +T N
Sbjct: 460 LDLLKEMESNGCPRSTVTYN-----TIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFN 514

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            L++ LCK   ++ A  +I +M +    P+  TYN+ +T YC+  +L KA  +  TM  N
Sbjct: 515 TLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTAN 574

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD---DDGKATSDVITSTILMDSYFKN 274
           G   + VT+  L++ LCK G    A+K L  +         KA + VI       S F+ 
Sbjct: 575 GFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVI------QSLFRR 628

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG-DISSAFAYFCQMLKRGFLPDVIT 333
            +   AL+L+ +M +     D + Y ++  G C  G  I  AF +  +M+ +GF+P+  +
Sbjct: 629 NNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSS 688

Query: 334 YNTLLNCLCKQGKLD 348
           +  L   L   G  D
Sbjct: 689 FRMLAEGLLNLGMDD 703



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 2/234 (0%)

Query: 337 LLNCLCKQGKLDEASHFY-GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           LL  L +Q   + A       L++   AP +  Y+ IIQ L   G        +  M  +
Sbjct: 59  LLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRRE 118

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFS-IRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
                  +    ++ Y R     +A   +R+ + +FGV ++   +N L+     G  +  
Sbjct: 119 GHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKL 178

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
             S+  EM   GI PDV T N LI A C    +  A+ + +EM    + PD  T+T L++
Sbjct: 179 LESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQ 238

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G    G+++ A  V  K+   G +   +   +L   Y +M   + A    QK +
Sbjct: 239 GFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEI 292


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 206/428 (48%), Gaps = 3/428 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   + AV++ LC+  + G    L  +M++    P+++T N L+  LC+ G  E+   
Sbjct: 213 EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHE 272

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+ +MSE   +P+   Y   I G C+   L+ A  + + M + G++PN V +N ++  LC
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
                 +A + L E+   D      D +T  IL+D + +NG   + + L   M       
Sbjct: 333 SAERWKEAEELLSEMFQKD---CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D++ Y  +INGFC  G I  A      M   G  P+ ++Y  +L  LC  G+  +A    
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + + G  P+ +++ T+I  LC  G + +A E L  ML     P+   ++ +IDG G+ 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G    A  + ++M++ G+S N   ++++  A +R G +     +   +    I  D   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N +I + C       A+  +  M+  G  P+  TYT LIKG  + G  KEA+E+ +++ +
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629

Query: 535 LGLAIDHI 542
            G    H+
Sbjct: 630 RGALRKHL 637



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 197/443 (44%), Gaps = 6/443 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           HV ++   C  G    ++ +   M  KG   D    N ++N +C+ G +++A  ++R+++
Sbjct: 150 HV-ILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                 +  +YNA + G C          L   M      PN VT N L+  LC+ GL  
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLF- 267

Query: 241 DAVKFLGEVLAD-DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
              + + EVLA   +   T D+     ++D   K G    A  + N M    ++ ++V Y
Sbjct: 268 ---ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N ++ G C       A     +M ++    D +T+N L++  C+ G +D        +  
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G  PD I+Y T+I G C  G I +A   L SM      P    + +++ G    G   +
Sbjct: 385 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD 444

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +   M+  G   N  TFN LI    + G +  A  L K+ML++G  PD+ +Y+ +I 
Sbjct: 445 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 504

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                G    AL+L + M+ +GI+P+ I Y+ +       G + +  ++F  I+   +  
Sbjct: 505 GLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRS 564

Query: 540 DHIPFRILKKRYRRMKESDKARD 562
           D + +  +     +  E+D+A D
Sbjct: 565 DAVLYNAVISSLCKRWETDRAID 587



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 194/413 (46%), Gaps = 3/413 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+  T   +V  LC  G +  A  V+ EMS    +P    Y+  +   CR      ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   G   +    N++++A+C++G + +AV  L ++         +D+++   ++  
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG---CEADIVSYNAVLKG 225

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                       L ++M + +   +IV +N LI   C NG          QM + G  PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           +  Y T+++ +CK+G L+ A+     +   G+ P+ + Y T+++GLC      +A E L 
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M +K    +   +N+++D + + G +     + + MLS G   +V T+  +I    + G
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            I +A  L K M   G  P+  +Y +++   C+ G    A +L  +M+++G  P+ +T+ 
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            LI   C +G +++A E+  ++   G + D I +  +     +  ++++A ++
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL 518



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 165/360 (45%), Gaps = 6/360 (1%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            YNA + GYCR  +L  A  L + +    + PN  T   +V  LC +G + DA++ L E+
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
                G A    +   IL ++  ++G    ++ +   M  K    D    N+++N  C  
Sbjct: 138 --SFKGCAPIPPMYHVIL-EAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G +  A     ++   G   D+++YN +L  LC   +  +       + +   AP+ +++
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            T+I  LC +G   +  E L  M E    P+  ++  IIDG  + G L  A  I + M S
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
           +G+  NV  +N ++          +A  L  EM       D  T+N+L+   C  G +  
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
            ++L ++ML  G  PD+ITYT +I G C  G + EA  +   + + G   + + + I+ K
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 87/217 (40%), Gaps = 38/217 (17%)

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+ YN ++   C+ G+L  A      +    V P+  ++  +++GLC  G I  A E L 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M  K   P P +++VI++   R G   N+  + + M + G +                 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTL---------------- 179

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
                              D    NL++ A C  G +  A+ L  ++   G   DI++Y 
Sbjct: 180 -------------------DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYN 220

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            ++KG C      + EE+  ++  +  A + + F  L
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 206/428 (48%), Gaps = 3/428 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   + AV++ LC+  + G    L  +M++    P+++T N L+  LC+ G  E+   
Sbjct: 213 EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHE 272

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+ +MSE   +P+   Y   I G C+   L+ A  + + M + G++PN V +N ++  LC
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
                 +A + L E+   D      D +T  IL+D + +NG   + + L   M       
Sbjct: 333 SAERWKEAEELLSEMFQKD---CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D++ Y  +INGFC  G I  A      M   G  P+ ++Y  +L  LC  G+  +A    
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + + G  P+ +++ T+I  LC  G + +A E L  ML     P+   ++ +IDG G+ 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G    A  + ++M++ G+S N   ++++  A +R G +     +   +    I  D   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N +I + C       A+  +  M+  G  P+  TYT LIKG  + G  KEA+E+ +++ +
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629

Query: 535 LGLAIDHI 542
            G    H+
Sbjct: 630 RGALRKHL 637



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 197/443 (44%), Gaps = 6/443 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           HV ++   C  G    ++ +   M  KG   D    N ++N +C+ G +++A  ++R+++
Sbjct: 150 HV-ILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                 +  +YNA + G C          L   M      PN VT N L+  LC+ GL  
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLF- 267

Query: 241 DAVKFLGEVLAD-DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
              + + EVLA   +   T D+     ++D   K G    A  + N M    ++ ++V Y
Sbjct: 268 ---ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N ++ G C       A     +M ++    D +T+N L++  C+ G +D        +  
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G  PD I+Y T+I G C  G I +A   L SM      P    + +++ G    G   +
Sbjct: 385 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD 444

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +   M+  G   N  TFN LI    + G +  A  L K+ML++G  PD+ +Y+ +I 
Sbjct: 445 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 504

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                G    AL+L + M+ +GI+P+ I Y+ +       G + +  ++F  I+   +  
Sbjct: 505 GLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRS 564

Query: 540 DHIPFRILKKRYRRMKESDKARD 562
           D + +  +     +  E+D+A D
Sbjct: 565 DAVLYNAVISSLCKRWETDRAID 587



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 194/413 (46%), Gaps = 3/413 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+  T   +V  LC  G +  A  V+ EMS    +P    Y+  +   CR      ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   G   +    N++++A+C++G + +AV  L ++         +D+++   ++  
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG---CEADIVSYNAVLKG 225

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                       L ++M + +   +IV +N LI   C NG          QM + G  PD
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           +  Y T+++ +CK+G L+ A+     +   G+ P+ + Y T+++GLC      +A E L 
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M +K    +   +N+++D + + G +     + + MLS G   +V T+  +I    + G
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            I +A  L K M   G  P+  +Y +++   C+ G    A +L  +M+++G  P+ +T+ 
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            LI   C +G +++A E+  ++   G + D I +  +     +  ++++A ++
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL 518



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 165/360 (45%), Gaps = 6/360 (1%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            YNA + GYCR  +L  A  L + +    + PN  T   +V  LC +G + DA++ L E+
Sbjct: 81  AYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
                G A    +   IL ++  ++G    ++ +   M  K    D    N+++N  C  
Sbjct: 138 --SFKGCAPIPPMYHVIL-EAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G +  A     ++   G   D+++YN +L  LC   +  +       + +   AP+ +++
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            T+I  LC +G   +  E L  M E    P+  ++  IIDG  + G L  A  I + M S
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
           +G+  NV  +N ++          +A  L  EM       D  T+N+L+   C  G +  
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDR 374

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
            ++L ++ML  G  PD+ITYT +I G C  G + EA  +   + + G   + + + I+ K
Sbjct: 375 VIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLK 434



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 87/217 (40%), Gaps = 38/217 (17%)

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+ YN ++   C+ G+L  A      +    V P+  ++  +++GLC  G I  A E L 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M  K   P P +++VI++   R G   N+  + + M + G +                 
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTL---------------- 179

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
                              D    NL++ A C  G +  A+ L  ++   G   DI++Y 
Sbjct: 180 -------------------DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYN 220

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            ++KG C      + EE+  ++  +  A + + F  L
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 212/462 (45%), Gaps = 39/462 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  V+  L   G++  AL   R ++++G    +++ N ++  L  +  +E A  ++  + 
Sbjct: 220 HGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVL 278

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +  P+PN  T+   I G+C+  E+D+A  LF  M   GI P+ + ++ L+    K G+LG
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
              K   + L         DV+  +  +D Y K+GD   A  ++  M  + I  ++V Y 
Sbjct: 339 MGHKLFSQALHKG---VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI G C +G I  AF  + Q+LKRG  P ++TY++L++  CK G L      Y  + K 
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  PD + Y  ++ GL   G ++ A  F + ML +S+     ++N +IDG+ R      A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +  LM  +G+  +V TF  ++      G + +A  L   M   G+ PD   Y  LI A
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575

Query: 481 SCNLGHIHLALQLYDEMLRRGIT-----------------------------------PD 505
            C      + LQL+D M R  I+                                   PD
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           I+TY  +I G+C+   + EAE +F  ++      + +   IL
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 131/511 (25%), Positives = 216/511 (42%), Gaps = 48/511 (9%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
            D  K M   G     +E D   +  +I      G +G    L  + + KG   DV+  +
Sbjct: 306 FDLFKVMEQRG-----IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
             ++   K GDL  A  V + M     SPN  TY   I G C+   + +A  ++  +   
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA--TSDVITSTILMDSYFKNG 275
           G+ P+ VT++ L+   CK G L       G  L +D  K     DV+   +L+D   K G
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRS-----GFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
               A+     M  ++I+ ++V +N LI+G+C       A   F  M   G  PDV T+ 
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH---------------- 379
           T++     +G+L+EA   +  + K G+ PD ++Y T+I   C H                
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595

Query: 380 ---GDIV----------------KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
               DI                  A +F  +++E  + P+   +N +I GY     L  A
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             I +L+       N  T   LI    +   +  A  +   M   G  P+  TY  L+  
Sbjct: 656 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 715

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
                 I  + +L++EM  +GI+P I++Y+ +I G C RG + EA  +F +     L  D
Sbjct: 716 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 775

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            + + IL + Y ++    +A  +++  +LRN
Sbjct: 776 VVAYAILIRGYCKVGRLVEAALLYEH-MLRN 805



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 184/392 (46%), Gaps = 3/392 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E     + ++I   C  G + +   L   MI+ G  PDV+ +  LV+ L K G +  A 
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
               +M       N   +N+ I G+CR+N  D+AL +F  M   GI+P+  T   ++   
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
             +G L +A+     +          D +    L+D++ K+      L L++ M +  I 
Sbjct: 542 IMEGRLEEALFLFFRMFK---MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKIS 598

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DI   NV+I+       I  A  +F  +++    PD++TYNT++   C   +LDEA   
Sbjct: 599 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 658

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           + +L  T   P+ ++   +I  LC + D+  A      M EK   P    +  ++D + +
Sbjct: 659 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             D+  +F + + M   G+S ++ +++ +I    + G + +A ++  + +   + PDV  
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 778

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
           Y +LI   C +G +  A  LY+ MLR G+ PD
Sbjct: 779 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 202/450 (44%), Gaps = 32/450 (7%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G + TA  + ++M+ +G  P+V+T+  L+  LC+ G + +A  +  ++ +    P+  TY
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           ++ I G+C+   L     L+  M   G  P+ V + +LV  L K+GL+  A++F  ++L 
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489

Query: 252 DD------------DG--------------------KATSDVITSTILMDSYFKNGDKFQ 279
                         DG                        DV T T +M      G   +
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           AL L+  MF+  ++ D +AY  LI+ FC +   +     F  M +     D+   N +++
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            L K  ++++AS F+  L +  + PD ++Y T+I G C    + +A      +      P
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
                 ++I    +  D+  A  +  +M   G   N  T+  L+   ++   I  +F L 
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           +EM   GI P + +Y+++I   C  G +  A  ++ + +   + PD++ Y  LI+G+C  
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 789

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           G + EA  ++  +   G+  D +  R L +
Sbjct: 790 GRLVEAALLYEHMLRNGVKPDDLLQRALSE 819



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 193/414 (46%), Gaps = 3/414 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G++  A  L + M Q+G  PD++ ++ L++   K G L     +  +    
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +   +++ I  Y +  +L  A  ++  M   GI PN VT+ IL+  LC+ G + +A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
               G++L          ++T + L+D + K G+     AL+ DM +     D+V Y VL
Sbjct: 411 FGMYGQILKRG---MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G    G +  A  +  +ML +    +V+ +N+L++  C+  + DEA   + ++   G+
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  ++ T+++   + G + +A      M +  + P+   +  +ID + +    +    
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ 587

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + DLM    +S+++   N +I    +   I DA      ++   + PD+ TYN +I   C
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +L  +  A ++++ +      P+ +T T LI   C   +M  A  +F+ +   G
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 177/371 (47%), Gaps = 11/371 (2%)

Query: 199 CRVNELDKALHLFSTMANNGIR-PNRVTHNILVHALCKKGLLG-DAVKFLGEVLAD--DD 254
           CR   +DKAL +F      G+  P    + +L        L+G D V  + +        
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRML------NSLIGSDRVDLIADHFDKLCRG 210

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           G   S V     ++D+ F  G+  +AL     + ++  +  IV+ N ++ G  ++  I  
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEV 269

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A      +L  G  P+V+T+ TL+N  CK+G++D A   + V+ + G+ PD I+Y T+I 
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G    G +    +     L K V  +  +++  ID Y + GDL+ A  +   ML  G+S 
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           NV T+  LI    + G I++AF +  ++L  G+ P + TY+ LI   C  G++     LY
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           ++M++ G  PD++ Y  L+ G   +G M  A     K+    + ++ + F  L   + R+
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509

Query: 555 KESDKARDIHQ 565
              D+A  + +
Sbjct: 510 NRFDEALKVFR 520



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 57/110 (51%)

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           I  +  L  +M +KG  P +++++ +++ LCK G +++A ++  +  + +  P+   Y  
Sbjct: 722 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAI 781

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            I GYC+V  L +A  L+  M  NG++P+ +    L      K L+   V
Sbjct: 782 LIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGV 831


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 215/415 (51%), Gaps = 3/415 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K G AL   + M+  G  P V T+N ++  L + GDLE A  +  EM      P+  TYN
Sbjct: 231 KGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYN 290

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
           + I GY +V  L  A+ +F  M + G  P+ +T+N L++  CK   +  A ++L  +   
Sbjct: 291 SLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGM--- 347

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                  +V+T + L+D++ K G   +A   + DM +  +Q +   Y  LI+  C  GD+
Sbjct: 348 KQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDL 407

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           + AF    +M + G   +++TY  LL+ LC+ G++ EA   +G L K G   +Q  Y ++
Sbjct: 408 NEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSL 467

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
             G      + KA + L  M +K++ P+  ++   I G  R  ++ ++ ++   M+  G+
Sbjct: 468 FHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGL 527

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           ++N + +  LI A  + G   +A +L +EM   GI   V TY +LI   C +G +  A++
Sbjct: 528 TANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVR 587

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +D M R G+ P+I+ YT LI G C    ++EA+ +F ++   G++ D + +  L
Sbjct: 588 YFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSL 642



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 215/445 (48%), Gaps = 3/445 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  L   G +  A  L  +M  KG  PD++T+N L++   K+G L  A  V  EM +  
Sbjct: 257 VIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAG 316

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYN+ I  +C+   + +A      M   G++PN VT++ L+ A CK G+L +A 
Sbjct: 317 CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEAN 376

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           KF  +++         +  T T L+D+  K GD  +A  L ++M Q  +  +IV Y  L+
Sbjct: 377 KFFVDMIRVG---LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALL 433

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C +G +  A   F  +LK G+  +   Y +L +   K   +++A      ++K  + 
Sbjct: 434 DGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLK 493

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD + Y T I GLC   +I  +   +  M++  +    +I+  +ID Y + G  + A ++
Sbjct: 494 PDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNL 553

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+   V T+  LI    + G +  A      M  +G+ P++  Y  LI   C 
Sbjct: 554 LQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCK 613

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              +  A  L++EML +GI+PD + YT LI G+   GN  EA  +  ++  +G+ +D   
Sbjct: 614 NDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCA 673

Query: 544 FRILKKRYRRMKESDKARDIHQKWL 568
           +  L   + R  +   A+ +  + L
Sbjct: 674 YTSLIWGFSRYGQVQLAKSLLDEML 698



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 202/425 (47%), Gaps = 8/425 (1%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
            + M+D G      E D   + ++I   C   +I  A      M Q+G  P+V+T++ L+
Sbjct: 309 FEEMKDAG-----CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLI 363

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           +  CK G L +A+    +M  +   PN  TY + I   C++ +L++A  L S M   G+ 
Sbjct: 364 DAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVN 423

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
            N VT+  L+  LC+ G + +A +  G +L       T +    T L   Y K     +A
Sbjct: 424 LNIVTYTALLDGLCEDGRMREAEELFGALL---KAGWTLNQQIYTSLFHGYIKAKMMEKA 480

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           + +  +M +KN++ D++ Y   I G C   +I  + A   +M+  G   +   Y TL++ 
Sbjct: 481 MDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDA 540

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
             K GK  EA +    +   G+    ++Y  +I GLC  G + +A  +   M    + P 
Sbjct: 541 YFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPN 600

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
             I+  +IDG  +   L  A ++ + ML  G+S +   + +LI    + G+  +A SL+ 
Sbjct: 601 IMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRN 660

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            M+  G+  D+  Y  LI      G + LA  L DEMLR+GI PD +    L++ +   G
Sbjct: 661 RMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELG 720

Query: 521 NMKEA 525
           ++ EA
Sbjct: 721 DINEA 725



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 130/252 (51%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A ++F  M+  G  P V TYN ++ CL ++G L+ A   +  +   G+ PD ++Y ++I 
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G    G +  A      M +    P+   +N +I+ + +   +  AF     M   G+  
Sbjct: 295 GYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQP 354

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           NV T++ LI A  + G + +A     +M+  G+ P+ FTY  LI A+C +G ++ A +L 
Sbjct: 355 NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLE 414

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
            EM + G+  +I+TYT L+ G C  G M+EAEE+F  +   G  ++   +  L   Y + 
Sbjct: 415 SEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKA 474

Query: 555 KESDKARDIHQK 566
           K  +KA DI ++
Sbjct: 475 KMMEKAMDILEE 486


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 230/505 (45%), Gaps = 68/505 (13%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++  AL  + +M++    P ++T+  LVN L K    ++A+ V+ EM    
Sbjct: 282 LIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKG 341

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SPN   +NA I GY R   +D AL +   M   G++PN VTHN L+   C+   +  A 
Sbjct: 342 FSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAE 401

Query: 244 KFLGEVLADD---DGKATSDVI-----------------------------TSTILMDSY 271
           + L  +L++    +  A S V+                               T+L+   
Sbjct: 402 QVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGL 461

Query: 272 FKNGDKFQALALWNDMF-QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
            K G   +A+ LW  +  +K +  +    N L+ G C  G++   F    +M++RG + D
Sbjct: 462 CKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLD 521

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            I+YNTL+   CK GK++EA      + K G  PD  +Y  +++GL   G +      L 
Sbjct: 522 GISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLH 581

Query: 391 SMLEKSVVPEPH-----------------------------------IWNVIIDGYGRCG 415
              +  VVP  +                                   ++N++I  + + G
Sbjct: 582 EAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAG 641

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
           + + AF +RD M S  +   +FT++++I        + +A  + +EM  +G+ P+VF Y 
Sbjct: 642 NFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYT 701

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            LIG  C LG +     +  EM    I P+ ITYT +I G+C  GN KEA ++  ++   
Sbjct: 702 ALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIAN 761

Query: 536 GLAIDHIPFRILKKRYRRMKESDKA 560
           G++ D + + +L+K Y +  E ++ 
Sbjct: 762 GISPDTVTYTVLQKGYCKENELEET 786



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 207/428 (48%), Gaps = 5/428 (1%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
            KG  P + + N+L++ L K  +L K+  V   M       +  TY   I  YC+  ++D
Sbjct: 199 SKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKID 258

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +A+ LF  M   G+ PN VT+N L+  LCK G L +A+ F G ++   + K    ++T  
Sbjct: 259 EAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMV---ENKVNPSLVTYG 315

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           IL++   K     +A ++  +M+ K    +   +N LI+G+   G++  A      M  +
Sbjct: 316 ILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLK 375

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  P+ +T+NTLL   C+  ++++A      L    ++ ++ +   ++  LC       A
Sbjct: 376 GLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSA 435

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR-DLMLSFGVSSNVFTFNALIL 444
            + + ++L +++     +  +++ G  +CG    A  +   L    G+++N  T NAL+ 
Sbjct: 436 LKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLY 495

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
                G++ + F + KEM+  G+  D  +YN LI   C  G I  A +L ++M+++G  P
Sbjct: 496 GLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKP 555

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
           D  TY  L+KG   +G M +   V  + +  G+  +   + ++ + Y      D A  + 
Sbjct: 556 DTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLF 615

Query: 565 QKWLLRNK 572
            K L+ NK
Sbjct: 616 NK-LVYNK 622



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 201/428 (46%), Gaps = 17/428 (3%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M + G + DV T+   +N  CK G +++A  +  +M E    PN  TYN  I G C+   
Sbjct: 232 MCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGR 291

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           L++AL     M  N + P+ VT+ ILV+ L K     +A   L E+ +   G + ++ + 
Sbjct: 292 LEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYS--KGFSPNEFVF 349

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           +  L+D Y + G+   AL + +DM  K ++ + V +N L+ GFC    +  A     + +
Sbjct: 350 NA-LIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQA-----EQV 403

Query: 324 KRGFLPDVITYNT-----LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
               L +V++ N      +L+ LCK  K D A      L    +  +      ++ GLC 
Sbjct: 404 LEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCK 463

Query: 379 HGDIVKAREFLLSMLE-KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
            G  ++A +    + + K +       N ++ G    G++   F +   M+  G+  +  
Sbjct: 464 CGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGI 523

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           ++N LI    + G I +AF LK++M+  G  PD +TYN L+    + G +    ++  E 
Sbjct: 524 SYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEA 583

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR---M 554
              G+ P+I TY  +++G+C    +  A  +F K+    + + ++ + IL   + +    
Sbjct: 584 KDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNF 643

Query: 555 KESDKARD 562
            E+ K RD
Sbjct: 644 TEAFKLRD 651



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 161/388 (41%), Gaps = 46/388 (11%)

Query: 128 LCLGGKIGTA--LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           LC  GK   A  LW R    +KG   +  T N L+  LC+ G++E+   V +EM E    
Sbjct: 461 LCKCGKHLEAIDLWFRLA-DKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLV 519

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
            +  +YN  I G C+  ++++A  L   M   G +P+  T+N L+  L  KG + D  + 
Sbjct: 520 LDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRV 579

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L E  A D G                                    +  +I  Y +++ G
Sbjct: 580 LHE--AKDHG------------------------------------VVPNIYTYALMLEG 601

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           +C    I +A + F +++        + YN L+    K G   EA      +  + + P 
Sbjct: 602 YCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPT 661

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
             +Y +II G+C +  + +A+     M  + ++P    +  +I GY + G +    SI  
Sbjct: 662 IFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQ 721

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M S  +  N  T+  +I    + G+  +A  L  EM+ +GI PD  TY +L    C   
Sbjct: 722 EMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKEN 781

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELI 513
            +   LQ         +  + ITYT L+
Sbjct: 782 ELEETLQ-----GDTAVPLEEITYTTLV 804



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 37/285 (12%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  GKI  A  L+ KM+++G  PD  T+N+L+  L   G ++    V+ E  +    PN 
Sbjct: 533 CKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNI 592

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TY   + GYC  + +D A+ LF+ +  N +  + V +NIL+ A  K G   +A K    
Sbjct: 593 YTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDA 652

Query: 249 VLADD------------DGKATSDVITS--------------------TILMDSYFKNGD 276
           + + +             G   +D++                      T L+  Y K G 
Sbjct: 653 MRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQ 712

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             Q  ++  +M    IQ + + Y ++I+G+C  G+   A     +M+  G  PD +TY  
Sbjct: 713 MDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTV 772

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           L    CK+ +L+E      +   T V  ++I+Y T++  L  H D
Sbjct: 773 LQKGYCKENELEET-----LQGDTAVPLEEITYTTLVDKLHPHSD 812



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 152/342 (44%), Gaps = 4/342 (1%)

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A   F    + G+ P+  + N L+ +L K   L  + +    +     G    DV T   
Sbjct: 190 AFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCR---GGVLIDVYTYAT 246

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
            +++Y K G   +A+ L+  M +  +  ++V YN LI+G C +G +  A  +  +M++  
Sbjct: 247 AINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENK 306

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P ++TY  L+N L K  K DEA+     +   G +P++  +  +I G    G++  A 
Sbjct: 307 VNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDAL 366

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
                M  K + P     N ++ G+ R   +  A  + + +LS  +S N    + ++   
Sbjct: 367 RVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLL 426

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML-RRGITPD 505
            +      A  + K +LL  I  +     LL+   C  G    A+ L+  +  ++G+  +
Sbjct: 427 CKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAAN 486

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             T   L+ G C RGNM+E   V  ++   GL +D I +  L
Sbjct: 487 TTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTL 528



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 122/257 (47%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           AF  F     +G  P + + N L++ L K  +L ++   +  + + GV  D  +Y T I 
Sbjct: 190 AFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAIN 249

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
             C  G I +A    L M E  V+P    +N +IDG  + G L  A   +  M+   V+ 
Sbjct: 250 AYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNP 309

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           ++ T+  L+    +     +A S+  EM   G  P+ F +N LI      G++  AL++ 
Sbjct: 310 SLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVR 369

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           D+M  +G+ P+ +T+  L++G C    M++AE+V   + +  L+++      +     + 
Sbjct: 370 DDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKS 429

Query: 555 KESDKARDIHQKWLLRN 571
            + D A  I +  LLRN
Sbjct: 430 SKFDSALKIVKALLLRN 446



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 3/196 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++   C   +I  A+ L  K++        + +N L+    K G+  +A  +   M 
Sbjct: 595 YALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMR 654

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P   TY++ I G C  + +++A  +F  M N G+ PN   +  L+   CK G + 
Sbjct: 655 SSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMD 714

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
                L E+ ++       + IT TI++D Y K G+  +A  L N+M    I  D V Y 
Sbjct: 715 QIESILQEMTSN---CIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYT 771

Query: 301 VLINGFCLNGDISSAF 316
           VL  G+C   ++    
Sbjct: 772 VLQKGYCKENELEETL 787



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 8/156 (5%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I  +C    +  A  +  +M  +G +P+V  +  L+   CK+G +++ + +++EM+
Sbjct: 665 YSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMT 724

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  TY   I GYC++    +A  L + M  NGI P+ VT+ +L    CK+  L 
Sbjct: 725 SNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELE 784

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
           + ++         D     + IT T L+D    + D
Sbjct: 785 ETLQ--------GDTAVPLEEITYTTLVDKLHPHSD 812


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 215/434 (49%), Gaps = 15/434 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC  G +  A  L  +M+  G  P V+T+ +L+  LC+    ++A  ++  + E+ 
Sbjct: 256 VVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEV- 314

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N    N  I G     +L +A  L+  M + G  P+  T+NIL+H LCK G  G AV
Sbjct: 315 ---NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAV 371

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E+   ++     +++T + L+ S+ +NG    A A+ + M  K    +   YN +I
Sbjct: 372 RMLDEM---EEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGII 428

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
                +G +  A     +M  +G  PD+ TYNT++  LC   ++DEA H +G L + GV 
Sbjct: 429 YALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVV 488

Query: 364 PDQISYKTIIQGLCIHG----DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            + I+Y T+I  L   G     +  A E +L      VV     +N +I    + G++  
Sbjct: 489 ANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVS----YNGLIKALCKEGNVDR 544

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           +  + + M++ G+  N F++N LI    + G + DA  L KEML  G+ PD+ TYN LI 
Sbjct: 545 SMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLIN 604

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C +G  H AL L +++    + PDI+TY  LI  HC    + +A  +  K  + G+  
Sbjct: 605 GLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVP 664

Query: 540 DHIPFRILKKRYRR 553
           +   + ++ + + R
Sbjct: 665 NERTWGMMVQNFVR 678



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/463 (30%), Positives = 217/463 (46%), Gaps = 28/463 (6%)

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           R LC  G+   AL L R M + G VPD + +  +++ L   G + +A  ++ EM  M  +
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
            +  T+N  + G C +  + +A  L   M  +G  P+ VT+  L+  LC+     +A   
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307

Query: 246 LGEV---------------LADDD-GKATS------------DVITSTILMDSYFKNGDK 277
           LG V               LA+    +AT             DV T  ILM    K G  
Sbjct: 308 LGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRC 367

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             A+ + ++M +K    +IV Y+ L++ FC NG    A A   QM  +GF  +   YN +
Sbjct: 368 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGI 427

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +  L K GKLDEA      +   G  PD  +Y TII  LC +  + +A     ++LE+ V
Sbjct: 428 IYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGV 487

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           V     +N +I      G       + + M+  G   +V ++N LI A  + G++  +  
Sbjct: 488 VANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMM 547

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L +EM+  GI P+ F+YN+LI   C  G +  AL+L  EML +G+TPDI+TY  LI G C
Sbjct: 548 LLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLC 607

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
             G    A  +  K+    +  D + + IL   + +++  D A
Sbjct: 608 KVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDA 650



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 165/327 (50%), Gaps = 3/327 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++  LC  G+ G+A+ +  +M +KG  P+++T++ L++  C+ G  + A  ++
Sbjct: 350 DVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAML 409

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +MS    S N   YN  I    +  +LD+A+ L   M + G +P+  T+N +++ LC  
Sbjct: 410 DQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNN 469

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             + +A    G +L +      ++ IT   L+ +   +G   + L L N+M       D+
Sbjct: 470 DQMDEAEHIFGNLLEEG---VVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDV 526

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V+YN LI   C  G++  +     +M+ +G  P+  +YN L+N LCK GK+ +A      
Sbjct: 527 VSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKE 586

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G+ PD ++Y T+I GLC  G    A   L  +  ++V P+   +N++I  + +   
Sbjct: 587 MLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRL 646

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALI 443
           L +A  + D  +S G+  N  T+  ++
Sbjct: 647 LDDASMLLDKAVSGGIVPNERTWGMMV 673



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 4/261 (1%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           AL L+  M +  +      + V     C  G    A A    M + G +PD + Y T+++
Sbjct: 164 ALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIH 223

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            L  QG + EA+     +   G A D  ++  ++ GLC  G + +A   +  M+     P
Sbjct: 224 ALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTP 283

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +  ++ G  R      A++    ML      NV   N +I      G +  A  L 
Sbjct: 284 SVVTYGFLLRGLCRTRQADEAYA----MLGRVPEVNVVMLNTVIRGCLAEGKLARATELY 339

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           + M   G  PDV TYN+L+   C LG    A+++ DEM  +G  P+I+TY+ L+   C  
Sbjct: 340 EMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRN 399

Query: 520 GNMKEAEEVFAKIQTLGLAID 540
           G   +A  +  ++   G +++
Sbjct: 400 GMWDDARAMLDQMSAKGFSMN 420



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 152/378 (40%), Gaps = 43/378 (11%)

Query: 206 KALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           +ALHL   M     + P+  ++N ++  L +     DA+     +L D   +      T 
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRD---RVPPTTFTF 183

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
            +   +  + G    ALAL   M +     D V Y  +I+     G ++ A     +ML 
Sbjct: 184 GVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLL 243

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G   DV T+N ++  LC  G + EA+     +   G  P  ++Y  +++GLC      +
Sbjct: 244 MGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADE 303

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A   L  + E +VV    + N +I G    G L+ A  + ++M S G   +V T+N L+ 
Sbjct: 304 AYAMLGRVPEVNVV----MLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMH 359

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL-------------------- 484
              + G    A  +  EM   G  P++ TY+ L+ + C                      
Sbjct: 360 GLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSM 419

Query: 485 ---------------GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
                          G +  A++L  EM  +G  PDI TY  +I   C    M EAE +F
Sbjct: 420 NSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIF 479

Query: 530 AKIQTLGLAIDHIPFRIL 547
             +   G+  + I +  L
Sbjct: 480 GNLLEEGVVANGITYNTL 497



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 12/253 (4%)

Query: 94  LKENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           L E +  ++ M+  G  P  CT  T       +I  LC   ++  A  +   ++++G V 
Sbjct: 437 LDEAMRLVQEMKSQGCKPDICTYNT-------IIYHLCNNDQMDEAEHIFGNLLEEGVVA 489

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           + +T+N L++ L   G  ++   +  EM       +  +YN  I   C+   +D+++ L 
Sbjct: 490 NGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLL 549

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M   GI+PN  ++N+L++ LCK G + DA++   E+L   +   T D++T   L++  
Sbjct: 550 EEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML---NQGLTPDIVTYNTLINGL 606

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K G    AL L   +  +N+  DIV YN+LI+  C    +  A     + +  G +P+ 
Sbjct: 607 CKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNE 666

Query: 332 ITYNTLLNCLCKQ 344
            T+  ++    +Q
Sbjct: 667 RTWGMMVQNFVRQ 679



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 73/165 (44%)

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
           +V P    +N ++    R    ++A  +   ML   V    FTF     A  R G   DA
Sbjct: 140 AVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDA 199

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            +L + M   G  PD   Y  +I A    G +  A  L DEML  G   D+ T+ +++ G
Sbjct: 200 LALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLG 259

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            C  G+++EA  +  ++   G     + +  L +   R +++D+A
Sbjct: 260 LCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEA 304


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 218/442 (49%), Gaps = 37/442 (8%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
             +++  C  G + +AL L  KM + G  P+ +T+  ++   CK G+++KA  +  +M  
Sbjct: 333 TTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKN 392

Query: 182 MRPSP----------------------------------NCATYNAFITGYCRVNELDKA 207
              SP                                  N  TYN+ ++  C+  ++ +A
Sbjct: 393 KDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEA 452

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             ++  M   G+RP+ V++N ++   C++G +  A     E+L   +     ++IT ++L
Sbjct: 453 CSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEML---EKGLKPNLITYSVL 509

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           MD YFK GD   A  L++ M  +NI       N++ING C  G  S +     ++++ GF
Sbjct: 510 MDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGF 569

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +P  +TYN +++   K+G ++ A   Y  + K GV+P+  +Y  +I G C   ++  A +
Sbjct: 570 IPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALK 629

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            +  M  K +  +  ++  +IDG+ R GD+ NA  +   +   G+S N   ++++I    
Sbjct: 630 VMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFR 689

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +  ++  A  L K M+ +GI  D+  Y  LI      G +  A +LY EML +GI PD+I
Sbjct: 690 KLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLI 749

Query: 508 TYTELIKGHCARGNMKEAEEVF 529
           TY+ LI G C +G ++ A+++ 
Sbjct: 750 TYSVLIHGLCNKGQLENAQKIL 771



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 229/495 (46%), Gaps = 72/495 (14%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM  KG   D  T + ++    + G LE+A+   RE        +   Y+  I   C+  
Sbjct: 214 KMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKP 273

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +   AL L   M + G  P+ V    ++    K+G + +AVK  GE+L+   GK   +V+
Sbjct: 274 DSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSC--GKPM-NVV 330

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
            +T LM  Y K GD   AL L++ M +  I  + V Y V+I   C NG++  A+  + QM
Sbjct: 331 VATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQM 390

Query: 323 --------------LKRGFL--------------------PDVITYNTLLNCLCKQGKLD 348
                         L RG+L                     +V TYN+LL+ LCK+GK+ 
Sbjct: 391 KNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMS 450

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA   +  + + GV P  +SY  +I G C  GD+  A    + MLEK + P    ++V++
Sbjct: 451 EACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLM 510

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFT------------------------------ 438
           DGY + GD   AF + D M    ++ + FT                              
Sbjct: 511 DGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFI 570

Query: 439 -----FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
                +N +I    + GS+  A ++  EM   G+ P+VFTY  LI   C   ++ LAL++
Sbjct: 571 PTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKV 630

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
            DEM  +GI  D+  Y  LI G C +G+M  A ++ +++Q +GL+ + + +  +   +R+
Sbjct: 631 MDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRK 690

Query: 554 MKESDKARDIHQKWL 568
           ++  + A  +H++ +
Sbjct: 691 LQNMEAALHLHKRMI 705



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 199/395 (50%), Gaps = 3/395 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  GK+  A  +  KM++KG  P V+++N ++   C+ GD++ A+ V  EM E    PN
Sbjct: 443 LCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPN 502

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY+  + GY +  + + A  L+  M    I P+  T NI+++ LCK G   ++   L 
Sbjct: 503 LITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLK 562

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           +++ +         +T   ++D + K G    ALA++ +M +  +  ++  Y  LINGFC
Sbjct: 563 KLVQEG---FIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFC 619

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            + ++  A     +M  +G   DV  Y  L++  C++G +  AS     L + G++P+++
Sbjct: 620 KSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKV 679

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            Y ++I G     ++  A      M+ + +  +  I+  +I G  + G L  A  +   M
Sbjct: 680 VYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEM 739

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           L+ G+  ++ T++ LI      G + +A  + ++M    + P VF YN LI      G++
Sbjct: 740 LAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNL 799

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
             A +L++EML +G+ PD  TY  L+ G    GN+
Sbjct: 800 QEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/426 (22%), Positives = 170/426 (39%), Gaps = 87/426 (20%)

Query: 228 ILVHALCKKG-LLGDAVKFLGEVLADDDGKATSDVITSTI-----------------LMD 269
           +L+H L K     G A   L    +DD G   S V+   I                 L++
Sbjct: 103 VLLHILTKSTETCGKARNLLNRFASDDWGPVPSVVVARLIESSRRLDFESDSRVFNYLLN 162

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
           SY K      A+  +N + +K+I   +   N+ ++    N  I  A   + +M  +G   
Sbjct: 163 SYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKG 222

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           D  T + ++    ++GKL+EA  ++      GV  D  +Y  +I+ +C   D V A   L
Sbjct: 223 DCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLL 282

Query: 390 LSMLEKSVVPEPHIW------------------------------NVII-----DGYGRC 414
             M +K  VP   I+                              NV++      GY + 
Sbjct: 283 REMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQ 342

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF-- 472
           GDL +A  + D M   G+  N  T+  +I    + G++  A+ +  +M    I P VF  
Sbjct: 343 GDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNV 402

Query: 473 --------------------------------TYNLLIGASCNLGHIHLALQLYDEMLRR 500
                                           TYN L+   C  G +  A  ++++M+R+
Sbjct: 403 NSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRK 462

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G+ P +++Y  +I GHC +G+M  A  VF ++   GL  + I + +L   Y +  +++ A
Sbjct: 463 GVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYA 522

Query: 561 RDIHQK 566
             ++ +
Sbjct: 523 FGLYDR 528



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 67/123 (54%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D + +  +I  L   GK+  A  L  +M+ KG +PD++T++ L++ LC  G LE A  ++
Sbjct: 712 DLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKIL 771

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M     +P    YN  ITG+ +   L +A  L + M + G+ P+  T++ILV+   K 
Sbjct: 772 EDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKD 831

Query: 237 GLL 239
           G L
Sbjct: 832 GNL 834



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 110/246 (44%), Gaps = 2/246 (0%)

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           F  D   +N LLN   K  ++++A   +  L +  + P        +  L  +  I +AR
Sbjct: 150 FESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREAR 209

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           +    M  K V  +    +V+I    R G L  A        + GV  +   ++ +I A 
Sbjct: 210 DVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAV 269

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            +      A  L +EM   G  P    +  +IG     G +  A+++  EML  G   ++
Sbjct: 270 CKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNV 329

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +  T L+KG+C +G++  A E+F K+   G+  +++ + ++ +   +    DKA +I+ +
Sbjct: 330 VVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQ 389

Query: 567 WLLRNK 572
             ++NK
Sbjct: 390 --MKNK 393


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 220/447 (49%), Gaps = 33/447 (7%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M   G  P+ +  N L++  C+ GD+ +A  V  EM+     PN  T+N  + G+CR N
Sbjct: 350 EMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSN 409

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD--------- 253
           ++++A  +   + ++G+  N    + ++H L ++     A+K + ++L+ +         
Sbjct: 410 QMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLT 469

Query: 254 ---------DGKA---------------TSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
                    +G +                ++ +TS  L+    + G+  +   +   M +
Sbjct: 470 PLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLE 529

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K +  D ++YN LI G C  G I  AF    +M+++ F PD  TYN L+  L   GK+D+
Sbjct: 530 KGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDD 589

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
                    + G  P+  +Y  +++G C    I  A +F  ++  + V     ++N++I 
Sbjct: 590 VHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIA 649

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
            Y R G+++ AF +RD M S G+     T+++LI      G + +A  + +EM  +G+ P
Sbjct: 650 AYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLP 709

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +VF Y  LIG  C LG + +   +  EM   GI P+ ITYT +I G+C  GNMKEA E+ 
Sbjct: 710 NVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELL 769

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKE 556
            ++   G+A D + +  L+K Y + +E
Sbjct: 770 NEMIRNGIAPDTVTYNALQKGYCKERE 796



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 225/481 (46%), Gaps = 34/481 (7%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  L   G+   AL  + +M++    P V+T+  L++ L K+   E+A+ V+ EM  M 
Sbjct: 296 VIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMG 355

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN   +NA I GYCR  ++ +AL +   MA  G++PN VT N L+   C+   +  A 
Sbjct: 356 FAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAE 415

Query: 244 KFLGEVLAD-----------------DDGKATSDVITSTILMDSYFKNGDKF-------- 278
           + L  +L+                  +     S +   T L+    +  D          
Sbjct: 416 QVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGL 475

Query: 279 -------QALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                  +A+ LW  +   K +  + V  N L++G C  G++   F    QML++G L D
Sbjct: 476 CKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLD 535

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            I+YNTL+   CK GK++EA      + +    PD  +Y  +++GL   G I      L 
Sbjct: 536 RISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLH 595

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
              E   VP  + + ++++GY +   + +A      +    V  +   +N LI A  R G
Sbjct: 596 EAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIG 655

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           ++ +AF L+  M   GI P   TY+ LI   C +G +  A ++++EM   G+ P++  YT
Sbjct: 656 NVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYT 715

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            LI GHC  G M     +  ++ + G+  + I + I+   Y ++    +AR++  + ++R
Sbjct: 716 ALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNE-MIR 774

Query: 571 N 571
           N
Sbjct: 775 N 775



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 199/451 (44%), Gaps = 39/451 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
             I   C GG++G A+ L  KM   G  P+V+T+N +++ L K G  E+A      M   
Sbjct: 260 TAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRS 319

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           + +P+  TY   I+G  ++   ++A  +   M + G  PN V  N L+   C+KG +G+A
Sbjct: 320 KVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEA 379

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ----------------------- 279
           ++   E+          + +T   L+  + ++    Q                       
Sbjct: 380 LRVRDEMAMKG---MKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYV 436

Query: 280 ------------ALALWNDMFQKNIQTDIVAYNVLINGFC-LNGDISSAFAYFCQMLKRG 326
                       AL +   +   NI+        L+ G C   G   +   +F     +G
Sbjct: 437 IHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKG 496

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
              + +T N LL+ LC++G ++E       + + G+  D+ISY T+I G C  G I +A 
Sbjct: 497 LAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAF 556

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           +    M+++   P+ + +N ++ G    G + +   +      +G   NV+T+  L+   
Sbjct: 557 KLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGY 616

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            +   I DA    K +  + +      YN+LI A C +G++  A +L D M  RGI P  
Sbjct: 617 CKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTC 676

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            TY+ LI G C  G + EA+E+F +++  GL
Sbjct: 677 ATYSSLIHGMCCIGRVDEAKEIFEEMRNEGL 707



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 176/402 (43%), Gaps = 40/402 (9%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P   T N  ++   + NEL K+  +F  +A  G+ P+  T    ++A CK G +GDAV  
Sbjct: 219 PCLKTCNLLLSSLVKANELHKSYEVFD-LACQGVAPDVFTFTTAINAFCKGGRVGDAVDL 277

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             ++   +      +V+T   ++D  FK+G   +AL   + M +  +   +V Y VLI+G
Sbjct: 278 FCKM---EGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISG 334

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
                    A     +M   GF P+ + +N L++  C++G + EA      ++  G+ P+
Sbjct: 335 LMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPN 394

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID---------------- 409
            +++ T++QG C    + +A + L+ +L   +     + + +I                 
Sbjct: 395 FVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVT 454

Query: 410 -------------------GYGRCGDLSNAFSIR-DLMLSFGVSSNVFTFNALILAETRG 449
                              G  +C   S A  +   L    G+++N  T NAL+      
Sbjct: 455 KLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCER 514

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G++ + F + K+ML  G+  D  +YN LI   C  G I  A +L +EM+++   PD  TY
Sbjct: 515 GNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTY 574

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
             L+KG    G + +   +  + +  G   +   + +L + Y
Sbjct: 575 NFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGY 616



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 180/441 (40%), Gaps = 74/441 (16%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM--S 180
           A+I   C  G +G AL +R +M  KG  P+ +T N L+   C+   +E+A+ V+  +  S
Sbjct: 365 ALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSS 424

Query: 181 EMRPSPNCATY---------------------------------NAFITGYCRVNELDKA 207
            +  + +  +Y                                    + G C+     +A
Sbjct: 425 GLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEA 484

Query: 208 LHL-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           + L F   A  G+  N VT N L+H LC++G + +  + L ++L   +     D I+   
Sbjct: 485 IELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQML---EKGLLLDRISYNT 541

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+    K G   +A  L  +M Q+  Q D   YN L+ G    G I        +  + G
Sbjct: 542 LIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYG 601

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYG------------------------------- 355
           F+P+V TY  LL   CK  ++++A  F+                                
Sbjct: 602 FVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAF 661

Query: 356 ----VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                +   G+ P   +Y ++I G+C  G + +A+E    M  + ++P    +  +I G+
Sbjct: 662 KLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGH 721

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            + G +    SI   M S G+  N  T+  +I    + G++ +A  L  EM+ +GI PD 
Sbjct: 722 CKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDT 781

Query: 472 FTYNLLIGASCNLGHIHLALQ 492
            TYN L    C    + + LQ
Sbjct: 782 VTYNALQKGYCKERELTVTLQ 802



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 159/359 (44%), Gaps = 41/359 (11%)

Query: 227 NILVHALCKK-GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
           ++L+H LC +   LG    F   V+    G     + T  +L+ S  K  +  ++  ++ 
Sbjct: 187 DLLLHILCSQFKCLGSRCAFDIFVMFSKRG-VFPCLKTCNLLLSSLVKANELHKSYEVF- 244

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
           D+  + +  D+  +   IN FC  G +  A   FC+M   G  P+V+TYN +++ L K G
Sbjct: 245 DLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSG 304

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           + +EA  F   + ++ V P  ++Y  +I GL       +A E L+ M      P   ++N
Sbjct: 305 RFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFN 364

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            +IDGY R GD+  A  +RD M   G+  N  TFN L+    R   +  A  +   +L  
Sbjct: 365 ALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSS 424

Query: 466 G--IFPDVFTY----------------------------------NLLIGASCNLGHIHL 489
           G  +  DV +Y                                   L++G     GH   
Sbjct: 425 GLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSE- 483

Query: 490 ALQLYDEMLR-RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           A++L+ ++   +G+  + +T   L+ G C RGNM+E  EV  ++   GL +D I +  L
Sbjct: 484 AIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTL 542



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 5/222 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++   C   +I  A+   + +  +      + +N L+   C+IG++ +A  +   M 
Sbjct: 609 YALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMK 668

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P CATY++ I G C +  +D+A  +F  M N G+ PN   +  L+   CK G   
Sbjct: 669 SRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLG--- 725

Query: 241 DAVKFLGEVLADDDGKAT-SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
             +  +G +L +        + IT TI++D Y K G+  +A  L N+M +  I  D V Y
Sbjct: 726 -QMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTY 784

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
           N L  G+C   +++       +      L + ITYNTL++ L
Sbjct: 785 NALQKGYCKERELTVTLQSDHKSNIGLPLEEEITYNTLIHKL 826



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 102/249 (40%), Gaps = 36/249 (14%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           AF  F    KRG  P + T N LL+ L K  +L ++   +  L+  GVAPD  ++ T I 
Sbjct: 205 AFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFD-LACQGVAPDVFTFTTAIN 263

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
             C                                  GR GD  + F     M   GV  
Sbjct: 264 AFC--------------------------------KGGRVGDAVDLFCK---MEGLGVFP 288

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           NV T+N +I    + G   +A   K  M+   + P V TY +LI     L     A ++ 
Sbjct: 289 NVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVL 348

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
            EM   G  P+ + +  LI G+C +G+M EA  V  ++   G+  + + F  L + + R 
Sbjct: 349 VEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRS 408

Query: 555 KESDKARDI 563
            + ++A  +
Sbjct: 409 NQMEQAEQV 417


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 207/431 (48%), Gaps = 6/431 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   H A++R L    ++  A  +  +M + G  PD + +N +++ L K G  ++A  V+
Sbjct: 224 DRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M      P   TY   +   C+   L++A  LF  MA +G RPN V +  L+H   K 
Sbjct: 284 DNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKS 343

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A     E++   +     DVIT T+++D   K+G+  QA   + +M +   + ++
Sbjct: 344 GRMKEACSLFDEMV---EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNV 400

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  +I G    G +++AF     M+  G  PD +TY  LL+  CK G+LDEA+     
Sbjct: 401 VTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDE 460

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP-EPHIWNVIIDGYGRCG 415
           L K   +P+   Y ++++GLC  G +    + L    + +    +P +   II G  + G
Sbjct: 461 LDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTG 520

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            L  A  I   M+S G   +  T+N LI  L  +R   +  AF+L  ++ + G  PD  T
Sbjct: 521 RLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVT 580

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  L    C +G +  A+++ +E   RG   D++ YT L  G C +G +  A  +F ++ 
Sbjct: 581 YTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMV 640

Query: 534 TLGLAIDHIPF 544
             G A D   +
Sbjct: 641 RQGGAPDAAAY 651



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 210/482 (43%), Gaps = 36/482 (7%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I      G++  A  L  +M++ G  PDV+TH  +++ LCK G+ E+A     EM 
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM 392

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  TY   I G  ++  +  A  +   M  +G  P+ VT+  L+   CK G L 
Sbjct: 393 RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLD 452

Query: 241 DAVKFLGEV------------------LAD------------DDGKATSDVITSTI---L 267
           +A + L E+                  L D            +  KA ++ +   +   +
Sbjct: 453 EAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSI 512

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD--ISSAFAYFCQMLKR 325
           +    K G   +A  ++  M  +  + D   YN+LING C + +  +  AFA    +   
Sbjct: 513 IVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMV 572

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G+LPD +TY  L   LCK G++D A       S  G   D ++Y  +  GLC  G + +A
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA 632

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
                 M+ +   P+   +  II+G  +   L +A    D M+  G    V T+ AL+ A
Sbjct: 633 VSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQA 692

Query: 446 ETRGGSIFDAFSLKKEMLLDG-IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
               G++ +AF   + ML  G +   V  Y+ LI   C    +  AL+L+++M+ RG  P
Sbjct: 693 LCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVP 752

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
             +T   L  G    G  ++A+E+  ++   G       F  +    R+  ES K   + 
Sbjct: 753 TAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLV 812

Query: 565 QK 566
           Q+
Sbjct: 813 QE 814



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 192/405 (47%), Gaps = 7/405 (1%)

Query: 121 HVA-VIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           HVA V+R L +    GTA+ + R    Q G   DV T+N L+N L    +  +   +  E
Sbjct: 88  HVAAVLRSLKV---TGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEE 144

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M +   +PN  ++N  I  + R    D A+  F  M     +P+  T  ILV  LCK G+
Sbjct: 145 MLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGM 204

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
              A +   E++A   G    D    T ++ +  K     +A  ++  M +     D +A
Sbjct: 205 DEKAFEVFHEMMAM--GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIA 262

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           YN +I+G    G    A      ML +  +P  +TY  L+N LCK G L+ A   + V++
Sbjct: 263 YNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMA 322

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
            +G  P+ + Y ++I G    G + +A      M+E    P+     V+IDG  + G+  
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A    + M+  G   NV T+  +I   ++ G + +AF + K M+  G FPD  TY  L+
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLL 442

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
              C LG +  A QL DE+ +   +P++  Y+ L+KG C  G+++
Sbjct: 443 DGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVE 487



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 197/464 (42%), Gaps = 41/464 (8%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           +C    D   +  +I  L   G    AL +   M+ K  VP  +T+  LVN LCK G LE
Sbjct: 253 KCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLE 312

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A+ + R M+     PN   Y + I G+ +   + +A  LF  M   G RP+ +TH +++
Sbjct: 313 RAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMI 372

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LCK G    A K   E++    G    +V+T T ++    K G    A  +   M   
Sbjct: 373 DGLCKSGNFEQAAKSFEEMM---RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAH 429

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL------------- 337
               D V Y  L++GFC  G +  A     ++ K    P++  Y++L             
Sbjct: 430 GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENT 489

Query: 338 ------------------LNC-----LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
                             L C     LCK G+LDEA   +  +   G  PD  +Y  +I 
Sbjct: 490 LDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN 549

Query: 375 GLCIHGDIVKAREF-LLSMLEK-SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           GLC   +    R F LL  LE    +P+   +  +  G  + G++  A  + +   S G 
Sbjct: 550 GLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGW 609

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           +++V  + AL       G +  A SL +EM+  G  PD   Y  +I        +  A +
Sbjct: 610 NADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACK 669

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            +DEM+ +G  P + TYT L++  C  GN+ EA   F  +   G
Sbjct: 670 FFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARG 713



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 147/299 (49%), Gaps = 1/299 (0%)

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           IL+ S+ +      A+  +  M +K  + D+  + +L++  C  G    AF  F +M+  
Sbjct: 159 ILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAM 218

Query: 326 GFLP-DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           GF+P D   +  ++  L K  ++ EA   +G + K G  PD I+Y T+I GL   G   +
Sbjct: 219 GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQE 278

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A + L +ML K+ VP    + ++++   + G L  A  +  +M + G   N   + +LI 
Sbjct: 279 ALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIH 338

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              + G + +A SL  EM+  G  PDV T+ ++I   C  G+   A + ++EM+R G  P
Sbjct: 339 GFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKP 398

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           +++TYT +I+G    G +  A  +   +   G   D + +  L   + ++   D+A  +
Sbjct: 399 NVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQL 457



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 6/132 (4%)

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G   +VFT+N L+       +    +++ +EML  GI P+ F++N+LI +         A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL-----AIDHIPFR 545
           +  ++ M R+   PD+ T+  L+   C  G  ++A EVF ++  +G      A+     R
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233

Query: 546 ILKKRYRRMKES 557
            L K  +R+KE+
Sbjct: 234 TLLK-AKRVKEA 244


>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
          Length = 690

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 212/462 (45%), Gaps = 39/462 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  V+  L   G++  AL   R ++++G    +++ N ++  L  +  +E A  ++  + 
Sbjct: 220 HGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVL 278

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +  P+PN  T+   I G+C+  E+D+A  LF  M   GI P+ + ++ L+    K G+LG
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
              K   + L         DV+  +  +D Y K+GD   A  ++  M  + I  ++V Y 
Sbjct: 339 MGHKLFSQALHKG---VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI G C +G I  AF  + Q+LKRG  P ++TY++L++  CK G L      Y  + K 
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  PD + Y  ++ GL   G ++ A  F + ML +S+     ++N +IDG+ R      A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +  LM  +G+  +V TF  ++      G + +A  L   M   G+ PD   Y  LI A
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575

Query: 481 SCNLGHIHLALQLYDEMLRRGIT-----------------------------------PD 505
            C      + LQL+D M R  I+                                   PD
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           I+TY  +I G+C+   + EAE +F  ++      + +   IL
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 177/371 (47%), Gaps = 11/371 (2%)

Query: 199 CRVNELDKALHLFSTMANNGIR-PNRVTHNILVHALCKKGLLG-DAVKFLGEVLAD--DD 254
           CR   +DKAL +F      G+  P    + +L        L+G D V  + +        
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRML------NSLIGSDRVDLIADHFDKLCRG 210

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           G   S V     ++D+ F  G+  +AL     + ++  +  IV+ N ++ G  ++  I  
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEV 269

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A      +L  G  P+V+T+ TL+N  CK+G++D A   + V+ + G+ PD I+Y T+I 
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G    G +    +     L K V  +  +++  ID Y + GDL+ A  +   ML  G+S 
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           NV T+  LI    + G I++AF +  ++L  G+ P + TY+ LI   C  G++     LY
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           ++M++ G  PD++ Y  L+ G   +G M  A     K+    + ++ + F  L   + R+
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509

Query: 555 KESDKARDIHQ 565
              D+A  + +
Sbjct: 510 NRFDEALKVFR 520



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/395 (23%), Positives = 185/395 (46%), Gaps = 3/395 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G++  A  L + M Q+G  PD++ ++ L++   K G L     +  +    
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +   +++ I  Y +  +L  A  ++  M   GI PN VT+ IL+  LC+ G + +A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
               G++L          ++T + L+D + K G+     AL+ DM +     D+V Y VL
Sbjct: 411 FGMYGQILKRG---MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G    G +  A  +  +ML +    +V+ +N+L++  C+  + DEA   + ++   G+
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  ++ T+++   + G + +A      M +  + P+   +  +ID + +    +    
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ 587

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + DLM    +S+++   N +I    +   I DA      ++   + PD+ TYN +I   C
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           +L  +  A ++++ +      P+ +T T LI   C
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 54/122 (44%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE D   +  +I   C   K    L L   M +     D+   N +++ L K   +E A 
Sbjct: 562 LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 621

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
                + E +  P+  TYN  I GYC +  LD+A  +F  +      PN VT  IL+H L
Sbjct: 622 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681

Query: 234 CK 235
           CK
Sbjct: 682 CK 683


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 210/432 (48%), Gaps = 5/432 (1%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
           T+   H+  +  L  G KI        +M  +G  PDV+T N +++ LC+      A  +
Sbjct: 161 TEVYNHLLTV--LAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLM 218

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           + EMS    +P+  T+   + G+     ++ AL L + M+  G  P  VT N+L++  CK
Sbjct: 219 LEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCK 278

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G +GDA+ ++ + +AD       D +T +  ++   +NG    AL +   M Q+  + D
Sbjct: 279 LGRVGDALGYIQQEIADG---FEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPD 335

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           +  Y+ +IN  C NG++  A     QM+  G LPD  T+NTL+  LC + +L+EA     
Sbjct: 336 VYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAR 395

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            L+  G++P+  ++  +I  LC  GD   A      M      P+   +N++ID     G
Sbjct: 396 ELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSG 455

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            L+ A  +   M   G   +  T+N +I    +   I +A  +  +M + GI  +  T+N
Sbjct: 456 KLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFN 515

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            LI   CN   I  A +L D+M+  G+ P+ +TY  ++  +C +GN+ +A ++   +   
Sbjct: 516 TLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTAN 575

Query: 536 GLAIDHIPFRIL 547
           G  +D + +  L
Sbjct: 576 GFEVDVVTYATL 587



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 195/425 (45%), Gaps = 5/425 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D      VI  LC   +  TA+ +  +M      PD  T   L+    + G +E A 
Sbjct: 192 IEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAAL 251

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   MSEM  SP   T N  I GYC++  +  AL        +G  P+RVT +  V+ L
Sbjct: 252 RLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGL 311

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C+ G +  A+K LG +L +       DV T + +++    NG+  +A  + N M      
Sbjct: 312 CQNGHVDHALKVLGLMLQEG---CEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCL 368

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D   +N LI   C    +  A     ++  +G  P+V T+N L+N LCK G    A   
Sbjct: 369 PDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRL 428

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI-WNVIIDGYG 412
           +  +  +G  PD+++Y  +I  LC  G + KA + LL  +E S  P+  + +N IIDG  
Sbjct: 429 FEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALD-LLKEMEVSGCPQSTVTYNTIIDGLC 487

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +   +  A  + D M   G+  N  TFN LI        I DA  L  +M+ +G+ P+  
Sbjct: 488 KRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNV 547

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TYN ++   C  G+I  A  +   M   G   D++TY  LI G C     + A ++   +
Sbjct: 548 TYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGM 607

Query: 533 QTLGL 537
           +  G+
Sbjct: 608 RMKGM 612



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 178/361 (49%), Gaps = 3/361 (0%)

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N   YN  +T     +++      ++ M++ GI P+ VT N ++ ALC+      AV  L
Sbjct: 160 NTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLML 219

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            E+ + D      D  T T LM+ + + G    AL L   M +       V  NVLING+
Sbjct: 220 EEMSSCD---VAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGY 276

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C  G +  A  Y  Q +  GF PD +T++T +N LC+ G +D A    G++ + G  PD 
Sbjct: 277 CKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDV 336

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
            +Y T+I  LC +G++ +A+  +  M++   +P+   +N +I        L  A  +   
Sbjct: 337 YTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARE 396

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           +   G+S NV+TFN LI A  + G    A  L +EM   G  PD  TYN+LI   C+ G 
Sbjct: 397 LTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGK 456

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  AL L  EM   G     +TY  +I G C R  ++EAEEVF ++   G+  + I F  
Sbjct: 457 LAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNT 516

Query: 547 L 547
           L
Sbjct: 517 L 517



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 191/403 (47%), Gaps = 4/403 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            E D       +  LC  G +  AL +   M+Q+G  PDV T++ ++N LC  G+LE+A 
Sbjct: 297 FEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAK 356

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M +    P+  T+N  I   C  N+L++AL L   +   G+ PN  T NIL++AL
Sbjct: 357 GIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINAL 416

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G    AV+   E+        T D +T  IL+D+   +G   +AL L  +M      
Sbjct: 417 CKVGDPHLAVRLFEEM---KSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCP 473

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
              V YN +I+G C    I  A   F QM   G   + IT+NTL++ LC   ++D+A+  
Sbjct: 474 QSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAEL 533

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+ P+ ++Y +I+   C  G+I KA + L +M       +   +  +I+G  +
Sbjct: 534 VDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCK 593

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
                 A  +   M   G+      +N +I +  RG +  DA SL +EM   G  PD FT
Sbjct: 594 ARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFT 653

Query: 474 YNLLIGASC-NLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           Y ++    C   G I  A     EM   G  P+  ++  L +G
Sbjct: 654 YKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEG 696



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 178/372 (47%), Gaps = 4/372 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   +  VI  LC  G++  A  +  +M+  G +PD  T N L+  LC    LE+A  
Sbjct: 333 EPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALD 392

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           + RE++    SPN  T+N  I   C+V +   A+ LF  M ++G  P+ VT+NIL+  LC
Sbjct: 393 LARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLC 452

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G L  A+  L E+  +  G   S V  +TI+ D   K     +A  +++ M    I  
Sbjct: 453 SSGKLAKALDLLKEM--EVSGCPQSTVTYNTII-DGLCKRRRIEEAEEVFDQMDVTGIGR 509

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           + + +N LI+G C    I  A     QM+  G  P+ +TYN++L   CKQG + +A+   
Sbjct: 510 NAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADIL 569

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             ++  G   D ++Y T+I GLC       A + L  M  K + P P  +N +I    R 
Sbjct: 570 QTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRG 629

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS-IFDAFSLKKEMLLDGIFPDVFT 473
            +  +A S+   M   G   + FT+  +     RGG  I +AF    EM  +G  P+  +
Sbjct: 630 NNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSS 689

Query: 474 YNLLIGASCNLG 485
           + +L     NLG
Sbjct: 690 FRMLAEGLLNLG 701



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 198/436 (45%), Gaps = 3/436 (0%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           C +  D      ++      G I  AL L+ +M + G  P  +T N L+N  CK+G +  
Sbjct: 225 CDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGD 284

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A   I++       P+  T++ F+ G C+   +D AL +   M   G  P+  T++ +++
Sbjct: 285 ALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVIN 344

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            LC  G L +A   + +++   D     D  T   L+ +        +AL L  ++  K 
Sbjct: 345 CLCNNGELEEAKGIVNQMV---DSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKG 401

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           +  ++  +N+LIN  C  GD   A   F +M   G  PD +TYN L++ LC  GKL +A 
Sbjct: 402 LSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKAL 461

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                +  +G     ++Y TII GLC    I +A E    M    +      +N +IDG 
Sbjct: 462 DLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGL 521

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
                + +A  + D M+S G+  N  T+N+++    + G+I  A  + + M  +G   DV
Sbjct: 522 CNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDV 581

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TY  LI   C       AL+L   M  +G+ P    Y  +I+      N ++A  +F +
Sbjct: 582 VTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFRE 641

Query: 532 IQTLGLAIDHIPFRIL 547
           +  +G   D   ++I+
Sbjct: 642 MTEVGGPPDAFTYKIV 657



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 200/420 (47%), Gaps = 9/420 (2%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P    +  ++ +L   G  +    ++ EM             +FI  Y R+   D A
Sbjct: 85  GLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDA 144

Query: 208 LHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS-DVITST 265
             L S   +  G++ N   +N L+  L +    G  +K L     +   +    DV+T  
Sbjct: 145 FDLVSNQLDMFGVQANTEVYNHLLTVLAE----GSKIKLLESAYTEMSSQGIEPDVVTFN 200

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            ++D+  +      A+ +  +M   ++  D   +  L+ GF   G I +A     +M + 
Sbjct: 201 TVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEM 260

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  P  +T N L+N  CK G++ +A  +       G  PD++++ T + GLC +G +  A
Sbjct: 261 GCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHA 320

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            + L  ML++   P+ + ++ +I+     G+L  A  I + M+  G   +  TFN LI+A
Sbjct: 321 LKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVA 380

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
                 + +A  L +E+ + G+ P+V+T+N+LI A C +G  HLA++L++EM   G TPD
Sbjct: 381 LCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPD 440

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKESDKARD 562
            +TY  LI   C+ G + +A ++  +++  G     + +  +     + RR++E+++  D
Sbjct: 441 EVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFD 500



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 110/261 (42%), Gaps = 39/261 (14%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I +LC  GK+  AL L ++M   G     +T+N +++ LCK   +E+A+ V  +M    
Sbjct: 447 LIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTG 506

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  T+N  I G C    +D A  L   M + G++PN VT+N ++   CK+G +  A 
Sbjct: 507 IGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAA 566

Query: 244 KFLGEVLADDDGKATSDVITSTILMD---------------------------------- 269
             L  + A+       DV+T   L++                                  
Sbjct: 567 DILQTMTANG---FEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVI 623

Query: 270 -SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG-DISSAFAYFCQMLKRGF 327
            S F+  +   AL+L+ +M +     D   Y ++  G C  G  I  AF +  +M   GF
Sbjct: 624 QSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGF 683

Query: 328 LPDVITYNTLLNCLCKQGKLD 348
           +P+  ++  L   L   G  D
Sbjct: 684 IPEFSSFRMLAEGLLNLGMDD 704


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 220/446 (49%), Gaps = 8/446 (1%)

Query: 90  LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
           LD +L EN  ++     T   +  L  +   +  +++ LC   ++  A  L  +M  KG 
Sbjct: 151 LDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGC 210

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            PD +T+  +V+ LCK G ++ A    RE++  R  P+   YNA I G C+   ++ A+ 
Sbjct: 211 PPDAVTYTTMVSSLCKAGKIDDA----RELAG-RFKPSVPVYNALIDGMCKEGRIEVAIK 265

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L   M +NG+ PN V+++ ++++LC  G +  A     ++         +++ T T L+ 
Sbjct: 266 LLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG---CDANIHTFTPLIK 322

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
             F  G  ++AL LW  M Q   + ++VAYN LI+G C NG +  A     QM + G LP
Sbjct: 323 GCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP 382

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           +V TY+ L++   K G L  AS  +  +   G  P+ ++Y  ++  LC +    +A   +
Sbjct: 383 NVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLV 442

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M  +   P    +N  I G    G +  A  + + M   G   N+ T+N L+ A  R 
Sbjct: 443 EKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRM 502

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
               +AF L +E+    + P++ TYN ++      G +  ALQL+ + L RG  PD ITY
Sbjct: 503 NKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITY 562

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTL 535
             +I  +C +G +K A ++  ++ ++
Sbjct: 563 NTMIHAYCKQGKVKIAAQLVERVSSM 588



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 210/439 (47%), Gaps = 8/439 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G    AL +  ++ + G  P V  +N+L++ L      +  + +   M +    PN  TY
Sbjct: 123 GSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY 182

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  +   C+ + +D A  LF  M+N G  P+ VT+  +V +LCK G + DA +       
Sbjct: 183 NILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL------ 236

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
              G+    V     L+D   K G    A+ L  +M    +  ++V+Y+ +IN  C++G+
Sbjct: 237 --AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGN 294

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  AFA F QM  RG   ++ T+  L+     +GKL EA   + ++ + G  P+ ++Y T
Sbjct: 295 VELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNT 354

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC +G + +A +    M     +P    ++++IDG+ + GDL  A    + M+S G
Sbjct: 355 LIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              NV T+  ++    +      A SL ++M L+G  P+  T+N  I   C  G +  A+
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAM 474

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +L + M   G  P+I TY EL+         +EA  +F +I+   L  + + +  +   +
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534

Query: 552 RRMKESDKARDIHQKWLLR 570
            R     +A  +  K L+R
Sbjct: 535 SRAGMMGEALQLFGKALVR 553



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 194/412 (47%), Gaps = 8/412 (1%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L   M + G +P+V T+N L+  LCK   ++ A  +  EMS     P+  TY   ++  C
Sbjct: 166 LYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLC 225

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +  ++D A  L         +P+   +N L+  +CK+G +  A+K LGE++   D     
Sbjct: 226 KAGKIDDARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMM---DNGVDP 277

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +V++ + +++S   +G+   A AL+  MF +    +I  +  LI G  + G +  A   +
Sbjct: 278 NVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW 337

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M++ G  P+V+ YNTL++ LC  G L+EA      + ++G  P+  +Y  +I G    
Sbjct: 338 KLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKS 397

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           GD+V A E    M+     P    +  ++D   +      A S+ + M   G + N  TF
Sbjct: 398 GDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITF 457

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N  I      G +  A  L + M   G  P++ TYN L+ A   +     A  L+ E+  
Sbjct: 458 NTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           R + P+++TY  ++ G    G M EA ++F K    G A D I +  +   Y
Sbjct: 518 RNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAY 569



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 4/222 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++  LC       A  L  KM  +G  P+ +T N  +  LC  G +E A  ++  M 
Sbjct: 422 YTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQ 481

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  TYN  +    R+N+ ++A  LF  +    ++PN VT+N +++   + G++G
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMG 541

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD-KFQALALWNDMFQKNIQTDIVAY 299
           +A++  G+ L         D IT   ++ +Y K G  K  A  +      K    DI+ Y
Sbjct: 542 EALQLFGKALVRG---TAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITY 598

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
             LI G C   +I  A A+  + + +G  P+  T+N L+ C 
Sbjct: 599 TSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 69/164 (42%)

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           + V+I+  GR  ++     I   M   G++     F  +I    R GS   A  +   + 
Sbjct: 77  YRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIG 136

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             G  P V  YN L+ A  +     +   LY  M + G+ P++ TY  L+K  C    + 
Sbjct: 137 EFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVD 196

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
            A ++F ++   G   D + +  +     +  + D AR++  ++
Sbjct: 197 AAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF 240


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 212/447 (47%), Gaps = 40/447 (8%)

Query: 151 PDVLTHNYLVNE----LCKIGDLEKADHVIREMSEMRPS--------------------- 185
           P+ + H  + N+    L + GDLE+A  ++  MS + PS                     
Sbjct: 53  PNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAE 112

Query: 186 ---------PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
                    P+   YNA + GYC   +LD A  L + M    + P+  T+N L+  LC +
Sbjct: 113 ARRVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGR 169

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G  G+A+  L ++L         DV+T TIL+++  K     QA+ L ++M  K    DI
Sbjct: 170 GRTGNALVVLDDMLRRG---CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDI 226

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + YNV++NG C  G +  A  +   +   G  P+ ++YN +L  LC   + ++A      
Sbjct: 227 ITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAE 286

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +S+ G  P+ +++  +I  LC  G +  A E L  + +    P    +N I+  + +   
Sbjct: 287 MSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKK 346

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A +  +LM+S G   ++ ++N L+ A  RGG +  A  L  ++   G  P + +YN 
Sbjct: 347 MDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 406

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +I      G    AL+L +EM+ +G+ PDIITY+ +  G C    ++EA   F K+Q +G
Sbjct: 407 VIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMG 466

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDI 563
           +  + + +  +     + +E+  A D+
Sbjct: 467 IRPNTVLYNAILLGLCKRRETHNAIDL 493



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 201/427 (47%), Gaps = 44/427 (10%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  +IR LC  G+ G AL +   M+++G VPDV+T+  L+   CK    ++A 
Sbjct: 152 MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAM 211

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM     +P+  TYN  + G C+   +D A+    ++ ++G  PN V++NI++  L
Sbjct: 212 KLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGL 271

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C      DA K + E                                      M QK   
Sbjct: 272 CTAERWEDAEKLMAE--------------------------------------MSQKGYP 293

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++V +N+LI+  C  G +  A     Q+ K G  P+ ++YN +L+  CKQ K+D A  F
Sbjct: 294 PNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF 353

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             ++   G  PD +SY T++  LC  G++  A E L  + +K   P    +N +IDG  +
Sbjct: 354 VELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK 413

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNAL---ILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            G    A  + + M++ G+  ++ T++ +   +  E R      AF   ++M   GI P+
Sbjct: 414 AGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDM---GIRPN 470

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
              YN ++   C     H A+ L+  M+  G  P+  TYT LI+G    G +KEA E+  
Sbjct: 471 TVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLG 530

Query: 531 KIQTLGL 537
           ++ + G+
Sbjct: 531 ELCSRGV 537



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 197/426 (46%), Gaps = 11/426 (2%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
            A+I+ LC  G+   A     + +     PDV+ +N +V   C  G L+ A  ++ +M  
Sbjct: 98  AALIKKLCASGRTAEA-----RRVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPM 152

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               P+  TYN  I G C       AL +   M   G  P+ VT+ IL+ A CK+     
Sbjct: 153 ---EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQ 209

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+K L E+ A        D+IT  ++++   + G    A+     +     + + V+YN+
Sbjct: 210 AMKLLDEMRAKG---CAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNI 266

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           ++ G C       A     +M ++G+ P+V+T+N L++ LC++G ++ A      + K G
Sbjct: 267 VLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYG 326

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             P+ +SY  I+   C    + +A  F+  M+ +   P+   +N ++    R G++  A 
Sbjct: 327 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAV 386

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   +   G +  + ++N +I   T+ G   +A  L  EM+  G+ PD+ TY+ +    
Sbjct: 387 ELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGL 446

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C    I  A++ + ++   GI P+ + Y  ++ G C R     A ++F  + + G   + 
Sbjct: 447 CREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNE 506

Query: 542 IPFRIL 547
             + IL
Sbjct: 507 STYTIL 512



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 146/275 (53%), Gaps = 3/275 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V++ LC   +   A  L  +M QKG  P+V+T N L++ LC+ G +E A  V+ ++ +  
Sbjct: 267 VLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYG 326

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN  +YN  +  +C+  ++D+A+     M + G  P+ V++N L+ ALC+ G +  AV
Sbjct: 327 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAV 386

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L ++    D   T  +I+   ++D   K G   +AL L N+M  K +Q DI+ Y+ + 
Sbjct: 387 ELLHQL---KDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTIS 443

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C    I  A   FC++   G  P+ + YN +L  LCK+ +   A   +  +   G  
Sbjct: 444 SGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCM 503

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           P++ +Y  +I+GL   G + +ARE L  +  + VV
Sbjct: 504 PNESTYTILIEGLTYEGLVKEARELLGELCSRGVV 538



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 166/349 (47%), Gaps = 8/349 (2%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           K+ +  L  MR  G        D   +  V+  +C  G++  A+   + +   G  P+ +
Sbjct: 208 KQAMKLLDEMRAKG-----CAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTV 262

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           ++N ++  LC     E A+ ++ EMS+    PN  T+N  I+  CR   ++ A+ +   +
Sbjct: 263 SYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQI 322

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G  PN +++N ++HA CK+  +  A+ F+  +++        D+++   L+ +  + 
Sbjct: 323 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG---CYPDIVSYNTLLTALCRG 379

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G+   A+ L + +  K     +++YN +I+G    G    A     +M+ +G  PD+ITY
Sbjct: 380 GEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITY 439

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           +T+ + LC++ +++EA   +  +   G+ P+ + Y  I+ GLC   +   A +  + M+ 
Sbjct: 440 STISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMIS 499

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
              +P    + ++I+G    G +  A  +   + S GV S      A I
Sbjct: 500 NGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAI 548


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 213/425 (50%), Gaps = 7/425 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LCL G++  A  L  KM+ KG   DV+T+  +VN +CK+GD + A +++ +M E 
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   Y+A I   C+      A +LFS M   GI PN  T+N ++   C  G   DA
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L +++   + +   DV+T   L+ +  K G  F+A  L ++M  + I  D V YN +
Sbjct: 351 QRLLRDMI---EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I GFC +     A   F  M      PDV+T+NT+++  C+  ++DE       +S+ G+
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             +  +Y T+I G C   ++  A++    M+   V P+    N+++ G+     L  A  
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + +++    +  +   +N +I    +G  + +A+ L   + + G+ PDV TYN++I   C
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               I  A  L+ +M   G  PD  TY  LI+G    G + ++ E+ +++++ G + D  
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643

Query: 543 PFRIL 547
             +++
Sbjct: 644 TIKMV 648



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 192/412 (46%), Gaps = 27/412 (6%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N ++    ++   + A  + R+M   R   N  ++N  I  +C  ++L  +L  F  +  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G +P+ VT N L+H LC +  + +A+   G                       Y     
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFG-----------------------YMVETG 206

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A+AL++ M +  +   ++ +N LING CL G +  A A   +M+ +G   DV+TY T
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           ++N +CK G    A +    + +T + PD + Y  II  LC  G    A+     MLEK 
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           + P    +N +IDG+   G  S+A  +   M+   ++ +V TFNALI A  + G +F+A 
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L  EML   IFPD  TYN +I   C       A  ++D M     +PD++T+  +I  +
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVY 442

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           C    + E  ++  +I   GL  +   +  L   +  +   + A+D+ Q+ +
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 213/443 (48%), Gaps = 24/443 (5%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L RKM  +    ++ + N L+   C    L  +     +++++   P+  T+N  + 
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 197 GYCRVNELDKALHLFSTMANN---------------GIRPNRVTHNILVHALCKKGLLGD 241
           G C  + + +AL LF  M                  G+ P  +T N L++ LC +G + +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244

Query: 242 AVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           A   + +++    GK    DV+T   +++   K GD   AL L + M + +I+ D+V Y+
Sbjct: 245 AAALVNKMV----GKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I+  C +G  S A   F +ML++G  P+V TYN +++  C  G+  +A      + + 
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            + PD +++  +I      G + +A +    ML + + P+   +N +I G+ +     +A
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + DLM     S +V TFN +I    R   + +   L +E+   G+  +  TYN LI  
Sbjct: 421 KHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C + +++ A  L+ EM+  G+ PD IT   L+ G C    ++EA E+F  IQ   + +D
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536

Query: 541 HIPFRILKKRYRRMKESDKARDI 563
            + + I+     +  + D+A D+
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDL 559



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 185/383 (48%), Gaps = 12/383 (3%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           K  L+ L  M +T      ++ D   + A+I  LC  G    A +L  +M++KG  P+V 
Sbjct: 278 KSALNLLSKMEET-----HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+N +++  C  G    A  ++R+M E   +P+  T+NA I+   +  +L +A  L   M
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            +  I P+ VT+N +++  CK     DA           D  A+ DV+T   ++D Y + 
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-------DLMASPDVVTFNTIIDVYCRA 445

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
               + + L  ++ ++ +  +   YN LI+GFC   ++++A   F +M+  G  PD IT 
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N LL   C+  KL+EA   + V+  + +  D ++Y  II G+C    + +A +   S+  
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             V P+   +NV+I G+     +S+A  +   M   G   +  T+N LI    + G I  
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625

Query: 455 AFSLKKEMLLDGIFPDVFTYNLL 477
           +  L  EM  +G   D FT  ++
Sbjct: 626 SIELISEMRSNGFSGDAFTIKMV 648


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 138/501 (27%), Positives = 230/501 (45%), Gaps = 43/501 (8%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R +++ D   +  +I  LC   +   A  L ++M +    PD  T+N L+N   + G + 
Sbjct: 288 RDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKIN 347

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A +V   M      P+ ATY   I GYCR   +DKAL + S M   G+ P+ +T++ L+
Sbjct: 348 HARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALL 407

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           +  CK  +LG A+  + ++ +      T +    TIL+D + + G+  +A  +   MF+ 
Sbjct: 408 NGYCKVSMLGPAIYLMEDLKSRG---ITINKTMRTILIDGFCQVGEISKAKQILKSMFED 464

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            I  D++ Y+ LING C    +        +M K G LP+ + Y TL+   CK G + EA
Sbjct: 465 GIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEA 524

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +  + + G+  + + +  ++      G I +A  F   M   ++  +   +N IID 
Sbjct: 525 LKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDS 584

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVF--------------------------------- 437
           Y   G++  AFS+ D M+ +G S NV                                  
Sbjct: 585 YCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAID 644

Query: 438 --TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             TFNAL+L   R G++ +A  L ++M+ +   PD+ TY +L+   C  G I  AL +  
Sbjct: 645 EKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQ 704

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL-GLAIDHIPFRILKKRYRRM 554
            ML +G+ PD + YT L+ G    G +K A  VF +I    GL  D I +  L   Y + 
Sbjct: 705 MMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKS 764

Query: 555 KESDKAR----DIHQKWLLRN 571
           +  +  +    D++Q  +  N
Sbjct: 765 RNVNTIKRMMSDMYQNEVYPN 785



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 217/469 (46%), Gaps = 40/469 (8%)

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
           L+LR  + +K  +  V T N L+N LC  G+  KA+ ++++M     S N  TYN  +  
Sbjct: 212 LFLRESLARKFPL-GVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHW 269

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
           Y +      AL +   M  + ++ +  T+NI++  LC+      A   L  +  DD    
Sbjct: 270 YVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDD---L 326

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
           T D  T   L++ +F+ G    A  ++N M ++N+   +  Y  +I+G+C N  I  A +
Sbjct: 327 TPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALS 386

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
              +M   G +P  +TY+ LLN  CK   L  A +    L   G+  ++     +I G C
Sbjct: 387 ILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFC 446

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR----------------CGDLSN-- 419
             G+I KA++ L SM E  + P+   ++ +I+G  R                 G L N  
Sbjct: 447 QVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDV 506

Query: 420 -----------AFSIRDLMLSF------GVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
                      A  +++ +  F      G+ +N    NAL+ A  R G I +A   ++ M
Sbjct: 507 LYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYM 566

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
               I  D  ++N +I + C+ G+I  A  +YD+M+R G +P++ TY  L++G C  G++
Sbjct: 567 SRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHL 626

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            +A +  + +  +  AID   F  L     R    D+A D+ +K +  N
Sbjct: 627 VQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNN 675



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 221/482 (45%), Gaps = 20/482 (4%)

Query: 84   QAVFNALDL------ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTA 137
            +  FNAL L       L E LD  + M     ++     D   +  ++   C  GKI  A
Sbjct: 645  EKTFNALLLGICRYGTLDEALDLCEKM-----IKNNCLPDIHTYTILLSGFCRKGKILPA 699

Query: 138  LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM-SEMRPSPNCATYNAFIT 196
            L + + M++KG VPD + +  L+N L   G ++ A +V  E+  +     +C  YN+ + 
Sbjct: 700  LVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMN 759

Query: 197  GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            GY +   ++    + S M  N + PN  ++NIL+H   K+G    ++ +L + +     +
Sbjct: 760  GYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSL-YLYKYMVRKGIR 818

Query: 257  ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
               D +T  +L+    + G    A+     M  + I  D + +++LI  F     + +A 
Sbjct: 819  P--DNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNAL 876

Query: 317  AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
              F  M      P   T++ ++N L ++G LD +      + + G+ P+   Y  ++   
Sbjct: 877  QVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAK 936

Query: 377  CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
            C  G+I +A      M    +VP     + II G  RCG L  A  +   M+  G+   V
Sbjct: 937  CRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTV 996

Query: 437  FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
             TF  L+ +  +   I DA  LK+ M L  +  DV +YN+LI   C   HI  AL LY E
Sbjct: 997  ATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGE 1056

Query: 497  MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP-FRILKKRYRRMK 555
            M  +G+ P+I TY  L     + G ++  EE+   I+  GL    IP ++  +   RRM+
Sbjct: 1057 MKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGL----IPAYKQPENLERRME 1112

Query: 556  ES 557
            ++
Sbjct: 1113 DA 1114



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 200/424 (47%), Gaps = 2/424 (0%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            ++R LC GG +  A      ++      D  T N L+  +C+ G L++A  +  +M +  
Sbjct: 616  LLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNN 675

Query: 184  PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              P+  TY   ++G+CR  ++  AL +   M   G+ P+ V +  L++ L  +G +  A 
Sbjct: 676  CLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAAS 735

Query: 244  KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
                E++  +   A  D I    LM+ Y K+ +      + +DM+Q  +  +  +YN+L+
Sbjct: 736  YVFHEIICKEGLYA--DCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILM 793

Query: 304  NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            +G+   G  S +   +  M+++G  PD +TY  L+  L + G +D A  F   +   G+ 
Sbjct: 794  HGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIF 853

Query: 364  PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            PD++ +  +I        +  A +    M    + P    ++ +I+G  R G L ++  +
Sbjct: 854  PDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKV 913

Query: 424  RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
               ML  G+  N   + AL+ A+ R G I  AF LK+EM   GI P     + +I   C 
Sbjct: 914  LHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCR 973

Query: 484  LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
             G +  A+ ++  M+R G+ P + T+T L+   C    + +A  +   ++   L +D + 
Sbjct: 974  CGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVS 1033

Query: 544  FRIL 547
            + +L
Sbjct: 1034 YNVL 1037



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 169/389 (43%), Gaps = 43/389 (11%)

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           N V   +LV A  K+  + DA   +  +  DD G   S V  +TIL ++  + G+     
Sbjct: 155 NHVVFELLVKAYVKERKVLDAA--VAVLFMDDCGFKASPVSCNTIL-NALVEEGESKHVW 211

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
               +   +     +   N+L+N  C NG+   A     Q +K   + + +TYNT+L+  
Sbjct: 212 LFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDML-QKMKSCHISNSVTYNTILHWY 270

Query: 342 CKQGKLDEA---------------SHFYGV--------------------LSKTGVAPDQ 366
            K+G+   A                + Y +                    + K  + PD+
Sbjct: 271 VKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDE 330

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
            +Y T+I G    G I  AR     ML +++VP    +  +IDGY R   +  A SI   
Sbjct: 331 CTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSE 390

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M   GV  +  T++AL+    +   +  A  L +++   GI  +     +LI   C +G 
Sbjct: 391 MQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGE 450

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           I  A Q+   M   GI PD+ITY+ LI G C    M E +E+ +++Q  G+  + + +  
Sbjct: 451 ISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTT 510

Query: 547 LKKRYRR---MKESDKA-RDIHQKWLLRN 571
           L   Y +   +KE+ K   DI+++ L+ N
Sbjct: 511 LICYYCKAGYVKEALKHFVDIYRRGLVAN 539


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 227/482 (47%), Gaps = 43/482 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C+  K+  A+ L  KM      PD +++N +++ LCK G L +A  ++ +M    
Sbjct: 218 LIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNG 277

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T+N  ++GYC++  L +A  +   MA N + P+  T+N+L+  LCK G + +A 
Sbjct: 278 LLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAF 337

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV-- 301
           +   E+   ++ K   DV+T   L++  F      +   L + M  K ++ + V YNV  
Sbjct: 338 RLKDEM---ENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVV 394

Query: 302 ---------------------------------LINGFCLNGDISSAFAYFCQMLKRGFL 328
                                            LING+C  G +S AF    +M ++G  
Sbjct: 395 KWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLK 454

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
            + +T NT+L+ LC + KLD+A       SK G   D++SY T+I G    G  V+A + 
Sbjct: 455 MNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKL 514

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              M EK ++P    +N +I G    G    +    + +L  G+  +  T+N +IL   R
Sbjct: 515 WDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCR 574

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +  AF    +M+     PD+FT N+L+   C  G +  AL+L++  + +G   D +T
Sbjct: 575 EGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVT 634

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR---RMKESDK--ARDI 563
           Y  +I G C     +EA ++ A+++   L  D   +  +        RMKE+++  +R +
Sbjct: 635 YNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIV 694

Query: 564 HQ 565
            Q
Sbjct: 695 EQ 696



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 190/400 (47%), Gaps = 26/400 (6%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM  KG  P+ +T+N +V    K G ++ A + +R+M E   SP+C T+N  I GYC+  
Sbjct: 377 KMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAG 436

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            L +A  +   M+  G++ N VT N ++H LC +  L DA K L    A   G    +V 
Sbjct: 437 RLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSS--ASKRGYFVDEVS 494

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             T++M  YFK+G   +A+ LW++M +K I   I+ YN +I G C +G    +     ++
Sbjct: 495 YGTLIM-GYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNEL 553

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L+ G +PD  TYNT++   C++G++++A  F+  + K    PD  +   +++GLC  G +
Sbjct: 554 LESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGML 613

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA +   + + K    +   +N II G  +      AF +   M    +  + +T+NA+
Sbjct: 614 DKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAI 673

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIF-----------------------PDVFTYNLLIG 479
           + A    G + +A      ++  G                         P+  T++  I 
Sbjct: 674 LSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQIN 733

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
             C  G    A+ +  E  ++GIT    TY  L++G   R
Sbjct: 734 ELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKR 773



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 206/450 (45%), Gaps = 12/450 (2%)

Query: 94  LKENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           L E  D L  M++ G  P R T          ++   C  G +  A  +   M Q   +P
Sbjct: 263 LNEARDLLLDMKNNGLLPNRNTFNI-------LVSGYCKLGWLKEAAQVIDLMAQNNVLP 315

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           DV T+N L+  LCK G +++A  +  EM  ++  P+  TYN  I G    +   K   L 
Sbjct: 316 DVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELI 375

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M   G++PN VT+N++V    K+G + +A   L ++   ++   + D +T   L++ Y
Sbjct: 376 DKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKM---EESGFSPDCVTFNTLINGY 432

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K G   +A  + ++M +K ++ + V  N +++  C    +  A+       KRG+  D 
Sbjct: 433 CKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDE 492

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           ++Y TL+    K GK  EA   +  + +  + P  I+Y T+I GLC  G   ++ + L  
Sbjct: 493 VSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNE 552

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           +LE  +VP+   +N II GY R G +  AF   + M+      ++FT N L+      G 
Sbjct: 553 LLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGM 612

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           +  A  L    +  G   D  TYN +I   C       A  L  EM  + + PD  TY  
Sbjct: 613 LDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNA 672

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           ++      G MKEAEE  ++I   G   D 
Sbjct: 673 ILSALADAGRMKEAEEFMSRIVEQGKLQDQ 702



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 199/431 (46%), Gaps = 20/431 (4%)

Query: 151 PDVLTHNYLVNELCKIGD-----LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           P++LT N L+N L +        L KA  +  ++ ++    N  T+N  I G C  N+L 
Sbjct: 172 PNLLTCNTLINALVRYPSKPSVYLSKA--IFSDVIKLGVKVNTNTFNILIYGCCIENKLS 229

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +A+ L   M +    P+ V++N ++  LCKKG L +A   L   L   +     +  T  
Sbjct: 230 EAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLL---LDMKNNGLLPNRNTFN 286

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           IL+  Y K G   +A  + + M Q N+  D+  YN+LI G C +G I  AF    +M   
Sbjct: 287 ILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENL 346

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGV-----LSKTGVAPDQISYKTIIQGLCIHG 380
             LPDV+TYNTL+N     G  D +S   G      +   GV P+ ++Y  +++     G
Sbjct: 347 KLLPDVVTYNTLIN-----GCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEG 401

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            +  A   L  M E    P+   +N +I+GY + G LS AF + D M   G+  N  T N
Sbjct: 402 KMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLN 461

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            ++        + DA+ L       G F D  +Y  LI      G    A++L+DEM  +
Sbjct: 462 TILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEK 521

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            I P IITY  +I G C  G   ++ +   ++   GL  D   +  +   Y R  + +KA
Sbjct: 522 EIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKA 581

Query: 561 RDIHQKWLLRN 571
              H K + ++
Sbjct: 582 FQFHNKMVKKS 592



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 135/276 (48%), Gaps = 3/276 (1%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF---AYFCQMLKRGFLPDVITYN 335
            A  ++N M + +++ +++  N LIN         S +   A F  ++K G   +  T+N
Sbjct: 157 HAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFN 216

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            L+   C + KL EA    G +      PD +SY TI+  LC  G + +AR+ LL M   
Sbjct: 217 ILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNN 276

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
            ++P  + +N+++ GY + G L  A  + DLM    V  +V+T+N LI    + G I +A
Sbjct: 277 GLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEA 336

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           F LK EM    + PDV TYN LI    +        +L D+M  +G+ P+ +TY  ++K 
Sbjct: 337 FRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKW 396

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +   G M  A     K++  G + D + F  L   Y
Sbjct: 397 YVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGY 432



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 161/355 (45%), Gaps = 4/355 (1%)

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           I  Y   N    A  +F+ M    ++PN +T N L++AL +         +L + +  D 
Sbjct: 146 IGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVR--YPSKPSVYLSKAIFSDV 203

Query: 255 GKATSDVITST--ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
            K    V T+T  IL+          +A+ L   M   +   D V+YN +++  C  G +
Sbjct: 204 IKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKL 263

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           + A      M   G LP+  T+N L++  CK G L EA+    ++++  V PD  +Y  +
Sbjct: 264 NEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNML 323

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I GLC  G I +A      M    ++P+   +N +I+G   C      F + D M   GV
Sbjct: 324 IGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGV 383

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             N  T+N ++    + G + +A +  ++M   G  PD  T+N LI   C  G +  A +
Sbjct: 384 KPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFR 443

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + DEM R+G+  + +T   ++   C    + +A ++ +     G  +D + +  L
Sbjct: 444 MMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTL 498



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 130/269 (48%), Gaps = 28/269 (10%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK   A+ L  +M +K  +P ++T+N ++  LC  G  +++   + E+ E    P+  TY
Sbjct: 506 GKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTY 565

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYCR  +++KA    + M     +P+  T NIL+  LC +G+L  A+K     ++
Sbjct: 566 NTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWIS 625

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQ-ALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
              GKA   V  +TI+  S     D+F+ A  L  +M +K +  D   YN +++     G
Sbjct: 626 K--GKAIDAVTYNTII--SGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAG 681

Query: 311 DISSAFAYFCQMLKRGFL-----------------------PDVITYNTLLNCLCKQGKL 347
            +  A  +  +++++G L                       P+ +T++  +N LC QGK 
Sbjct: 682 RMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKY 741

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            +A H     ++ G+   + +Y ++++GL
Sbjct: 742 KDAMHMVQESTQKGITLHKSTYISLMEGL 770


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 209/434 (48%), Gaps = 5/434 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D R +   +  L    K+     L  KM+     PDV T N L+  LCK   L  A 
Sbjct: 160 VKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAI 219

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M      P+  T+   + G+    +++ AL +   M  +G     V+ N+LV+ L
Sbjct: 220 LMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGL 279

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G + +A++F+ E    ++G    D +T   L++   + G   Q L + + M +K  +
Sbjct: 280 CKEGRIEEALRFIYE----EEG-FCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFE 334

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+  YN LI+G C  G+I  A      M+ R   P+ +TYNTL+  LCK+  ++ A+  
Sbjct: 335 LDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATEL 394

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             VL+  GV PD  ++ ++IQGLC+  +   A E    M EK   P+   ++++I+    
Sbjct: 395 ARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCS 454

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              L  A  +   M   G + NV  +N LI    +   + DA  +  +M + G+     T
Sbjct: 455 ERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVT 514

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN LI   C    +  A QL D+M+  G+ PD  TYT ++K  C +G++K A ++   + 
Sbjct: 515 YNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMT 574

Query: 534 TLGLAIDHIPFRIL 547
             G   D + +  L
Sbjct: 575 LNGCEPDIVTYGTL 588



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 219/477 (45%), Gaps = 30/477 (6%)

Query: 84  QAVFNAL------DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTA 137
           Q  FNAL         +K+ L+ +  M + G      E D   + ++I  LC  G+I  A
Sbjct: 302 QVTFNALVNGLCRTGHIKQGLEMMDFMLEKG-----FELDVYTYNSLISGLCKLGEIDEA 356

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
           + +   M+ +   P+ +T+N L+  LCK   +E A  + R ++     P+  T+N+ I G
Sbjct: 357 VEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQG 416

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
            C  +  + A+ LF  M   G  P+  T++IL+ +LC +  L +A+  L E+  +  G A
Sbjct: 417 LCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM--ELSGCA 474

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
            + V+ +T L+D   KN     A  +++ M    +    V YN LING C +  +  A  
Sbjct: 475 RNVVVYNT-LIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQ 533

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
              QM+  G  PD  TY T+L   C+QG +  A+     ++  G  PD ++Y T+I GLC
Sbjct: 534 LMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLC 593

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G +  A + L S+  K +V  P  +N +I    +      A  +   M+  G   +V 
Sbjct: 594 KAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVI 653

Query: 438 TFNALILAETRGG-SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           T+  +      GG  I +A     EML  GI P+  ++  L    C+L      +QL + 
Sbjct: 654 TYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINM 713

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           ++ +G      + T +I+G             F KIQ    A+ ++   + +K+ RR
Sbjct: 714 VMEKGRFSQ--SETSIIRG-------------FLKIQKFNDALANLGAILDRKKPRR 755



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 206/427 (48%), Gaps = 6/427 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  G+I  AL  R    ++G  PD +T N LVN LC+ G +++   ++  M E  
Sbjct: 275 LVNGLCKEGRIEEAL--RFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKG 332

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TYN+ I+G C++ E+D+A+ +   M +    PN VT+N L+  LCK+  + +A 
Sbjct: 333 FELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHV-EAA 391

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L  VL         DV T   L+       ++  A+ L+ +M +K    D   Y++LI
Sbjct: 392 TELARVLTSKG--VLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILI 449

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
              C    +  A     +M   G   +V+ YNTL++ LCK  ++ +A   +  +   GV+
Sbjct: 450 ESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVS 509

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
              ++Y T+I GLC    + +A + +  M+ + + P+   +  ++  + + GD+  A  I
Sbjct: 510 RSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADI 569

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G   ++ T+  LI    + G +  A  L + + + G+      YN +I A C 
Sbjct: 570 VQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCK 629

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHC-ARGNMKEAEEVFAKIQTLGLAIDHI 542
                 A++L+ EM+ +G  PD+ITY  + +G C   G ++EA +   ++   G+  +  
Sbjct: 630 RKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFP 689

Query: 543 PFRILKK 549
            F  L +
Sbjct: 690 SFGFLAE 696



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/278 (20%), Positives = 110/278 (39%), Gaps = 45/278 (16%)

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC----IHGDIVKAREFL 389
           ++ LL  L + G  D        +  + +  D+ ++   ++       +H +I     FL
Sbjct: 95  FHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPL--FL 152

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
           L   + +V P+   +NV +    +   L    ++   M++  V  +V TFN LI A  + 
Sbjct: 153 LMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKA 212

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTY----------------------------------- 474
             +  A  + ++M   G+ PD  T+                                   
Sbjct: 213 HQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSV 272

Query: 475 NLLIGASCNLGHIHLALQ-LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           N+L+   C  G I  AL+ +Y+E    G  PD +T+  L+ G C  G++K+  E+   + 
Sbjct: 273 NVLVNGLCKEGRIEEALRFIYEE---EGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFML 329

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             G  +D   +  L     ++ E D+A +I    + R+
Sbjct: 330 EKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRD 367


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 229/447 (51%), Gaps = 3/447 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G+I  +  +   ++++G  PDV+T   L+  LC  G+++KA     ++  + 
Sbjct: 110 LINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALE 169

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  +Y   I G C++ E   A+ L   +    I+P+ V +NI++ +LCK  L+G+A 
Sbjct: 170 FQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEAC 229

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+ A    +   +V+T T L+  +   G   +A+AL N+M  KNI  D+  +++LI
Sbjct: 230 NLYSEMNAK---QIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILI 286

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +     G + +A      M+K    PDV+TYN+L++      ++  A + +  ++++GV 
Sbjct: 287 DALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVT 346

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P   SY  +I GLC    + +A      M  K+V+P    +N +IDG  + G ++  + +
Sbjct: 347 PGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDL 406

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M      ++V T+++LI A  +   +  A +L K+M+   I PD++TY +LI   C 
Sbjct: 407 VDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCK 466

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G + +A +++  +L +G   DI TYT +I G C  G   EA  + +K++  G   + I 
Sbjct: 467 GGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAIT 526

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           F I+        E+DKA  + ++ + R
Sbjct: 527 FDIIICALFEKDENDKAEKLLREMIAR 553



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 203/408 (49%), Gaps = 3/408 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           +  TA+ L + +  KG   D++T N L+N  C +G +  +  V+  + +    P+  T  
Sbjct: 84  RFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLT 143

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I G C   E+ KAL     +     + +R+++  L++ LCK G    A++ +  +   
Sbjct: 144 TLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNL--- 200

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
           ++     DV+   I++DS  KN    +A  L+++M  K I  ++V Y  LI GFC+ G +
Sbjct: 201 EERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCL 260

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A A   +M  +   PDV T++ L++ L K+GK+  A     V+ K  V PD ++Y ++
Sbjct: 261 IEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSL 320

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           + G  +  ++  A+    SM +  V P    + ++IDG  +   +  A S+ + M    V
Sbjct: 321 VDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNV 380

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             N  TFN+LI    + G I   + L  +M       DV TY+ LI A C   H+  A+ 
Sbjct: 381 IPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIA 440

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           L+ +M+ + I PD+ TYT LI G C  G +K A+EVF  +   G  +D
Sbjct: 441 LFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLD 488



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 191/393 (48%), Gaps = 3/393 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V    + D   +  +I  LC  G+   A+ L R + ++   PDV+ +N +++ LCK   +
Sbjct: 166 VALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLV 225

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A ++  EM+  +  PN  TY   I G+C +  L +A+ L + M    I P+  T +IL
Sbjct: 226 GEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSIL 285

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           + AL K+G +  A   L  ++         DV+T   L+D YF   +   A  ++N M Q
Sbjct: 286 IDALGKEGKMKAAKIVLAVMM---KAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQ 342

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             +   + +Y ++I+G C    +  A + F +M  +  +P+ IT+N+L++ LCK G++  
Sbjct: 343 SGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAY 402

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
                  +       D I+Y ++I  LC +  + +A      M+ + + P+ + + ++ID
Sbjct: 403 VWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILID 462

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  + G L  A  +   +L  G   ++ T+  +I    + G   +A +L  +M  +G  P
Sbjct: 463 GLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIP 522

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +  T++++I A         A +L  EM+ RG+
Sbjct: 523 NAITFDIIICALFEKDENDKAEKLLREMIARGL 555



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 155/292 (53%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A++L   +  K I +D+V  N+LIN FC  G I+ +F+    +LKRG+ PDVIT  TL+ 
Sbjct: 88  AISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIK 147

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LC +G++ +A  F+  +       D+ISY T+I GLC  G+   A + + ++ E+S+ P
Sbjct: 148 GLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKP 207

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +  ++N+IID   +   +  A ++   M +  +  NV T+  LI      G + +A +L 
Sbjct: 208 DVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALL 267

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            EM L  I PDV+T+++LI A    G +  A  +   M++  + PD++TY  L+ G+   
Sbjct: 268 NEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLV 327

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             +K A+ VF  +   G+      + I+     + K  D+A  + ++   +N
Sbjct: 328 NEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKN 379



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 135/267 (50%), Gaps = 3/267 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A  +   M++    PDV+T+N LV+    + +++ A +V   M++   +P   +Y
Sbjct: 293 GKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSY 352

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I G C+   +D+A+ LF  M +  + PN +T N L+  LCK G +      + ++  
Sbjct: 353 TIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKM-- 410

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             D    +DVIT + L+D+  KN    QA+AL+  M  + IQ D+  Y +LI+G C  G 
Sbjct: 411 -RDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGR 469

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F  +L +G+  D+ TY  +++  CK G  DEA      +   G  P+ I++  
Sbjct: 470 LKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDI 529

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVV 398
           II  L    +  KA + L  M+ + ++
Sbjct: 530 IICALFEKDENDKAEKLLREMIARGLL 556



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 163/367 (44%), Gaps = 38/367 (10%)

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
           N+ + A+ LF+ M      P     N ++ +L K      A+     +   D    TSD+
Sbjct: 48  NDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHL---DFKGITSDL 104

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T  IL++ +   G    + ++   + ++    D++    LI G CL G++  A  +   
Sbjct: 105 VTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDD 164

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGK----------------------------------- 346
           ++   F  D I+Y TL+N LCK G+                                   
Sbjct: 165 VVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKL 224

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           + EA + Y  ++   + P+ ++Y T+I G CI G +++A   L  M  K++ P+ + +++
Sbjct: 225 VGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSI 284

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +ID  G+ G +  A  +  +M+   V  +V T+N+L+        +  A  +   M   G
Sbjct: 285 LIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSG 344

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           + P V +Y ++I   C    +  A+ L++EM  + + P+ IT+  LI G C  G +    
Sbjct: 345 VTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVW 404

Query: 527 EVFAKIQ 533
           ++  K++
Sbjct: 405 DLVDKMR 411



 Score = 39.3 bits (90), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 45/111 (40%)

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           DA +L   MLL    P  F +N ++ +   +     A+ L   +  +GIT D++T   LI
Sbjct: 52  DAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILI 111

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
              C  G +  +  V A I   G   D I    L K      E  KA   H
Sbjct: 112 NCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFH 162


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 217/459 (47%), Gaps = 31/459 (6%)

Query: 138 LWLRRKMIQKGTVP-DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           +W     I+   VP +  T+  L++ LC+   L+ A   +RE       P+  ++NA ++
Sbjct: 219 MWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMS 278

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G+C++  +D A   F  M   G+ P+  ++NIL+H LC  G + +A++F  ++   ++  
Sbjct: 279 GFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDM---ENHG 335

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D++T  IL + +   G    A  +   M    +  D+V Y +LI G C  G+I  +F
Sbjct: 336 VEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESF 395

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK------ 370
               +ML +G    ++TY  LL+ LCK G++DEA      +   G+ PD ++Y       
Sbjct: 396 KLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEE 455

Query: 371 ---------------------TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
                                 II GL   G I +A+ +  S+ +  V  E  ++N++ID
Sbjct: 456 AIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMID 515

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           GY + G++  A      ++  G+S  + TFN+LI    + G + +A  L   + + G+ P
Sbjct: 516 GYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVP 575

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
              TY  L+   C  G +H    +  EM  + I P  ITYT ++KG C  G + E+ ++ 
Sbjct: 576 TSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLL 635

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             +   GL  D I +  + + + +  +  KA  +H + L
Sbjct: 636 KYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQML 674



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 217/442 (49%), Gaps = 11/442 (2%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++  L  D   +  ++  LC+ G +  AL     M   G  PD++T+N L N    +G +
Sbjct: 297 IKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLI 356

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A  V++ M     +P+  TY   I G+C++  ++++  L   M + G++ + VT+ +L
Sbjct: 357 SGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVL 416

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           + +LCK G + +AV  L E+   +      D++T        +  G   +A+ L+ +M  
Sbjct: 417 LSSLCKSGRIDEAVILLHEM---EVIGLKPDLLT--------YSRGAVEEAIELYEEMCS 465

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K I  +    + +I+G    G IS A  YF  + K     ++I YN +++   K G + E
Sbjct: 466 KRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGE 525

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   Y  + + G++P  +++ ++I G C  G + +A + L ++    +VP    +  +++
Sbjct: 526 AVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMN 585

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           GY   GD+ + F +   M +  +     T+  ++    + G + ++  L K M   G+FP
Sbjct: 586 GYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFP 645

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D  TYN +I + C    +  A QL+++ML+  + P  +TY  LI G C  GN+K+A+ + 
Sbjct: 646 DQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLL 705

Query: 530 AKIQTLGLAIDHIPFRILKKRY 551
             +Q   + +  + +  + K +
Sbjct: 706 VTLQDQSIRLTKVAYTTIIKAH 727



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 207/450 (46%), Gaps = 11/450 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I   C  G I  +  L+ KM+ +G    ++T+  L++ LCK G +++A 
Sbjct: 371 LNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAV 430

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM  +   P+  TY+           +++A+ L+  M +  I PN    + ++  L
Sbjct: 431 ILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSFVCSAIISGL 482

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            +KG + +A  +   V   D      ++I   I++D Y K G+  +A+  +  + +K I 
Sbjct: 483 FEKGAISEAQMYFDSVTKSD---VAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGIS 539

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             IV +N LI GFC  G ++ A      +   G +P  +TY TL+N  C++G +      
Sbjct: 540 PTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDM 599

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +    + P QI+Y  +++GLC  G + ++ + L  M  + + P+   +N +I  + +
Sbjct: 600 LHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCK 659

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             DL  AF + + ML   +  +  T+N LI      G++ DA  L   +    I      
Sbjct: 660 AHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVA 719

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  +I A C  G +  AL  + +M+ RG    I  Y+ +I   C R  + +A+  F  + 
Sbjct: 720 YTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMML 779

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           T G+  D     ++   + R  + +   +I
Sbjct: 780 THGIPPDQDICLVMLNAFHRSGDPNSVFEI 809



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 185/386 (47%), Gaps = 49/386 (12%)

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+ +M  +    + ATYN+ +     +   D    +++ +  +G+  N  T+ IL+  LC
Sbjct: 190 VLAKMKVLNLQVSIATYNSLLYN---LRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLC 246

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           ++  L DAV FL E   ++ G +                                     
Sbjct: 247 RQSRLQDAVTFLRETGGEEFGPS------------------------------------- 269

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
            +V++N L++GFC  G +  A ++FC M+K G LPDV +YN LL+ LC  G ++EA  F 
Sbjct: 270 -VVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFT 328

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   GV PD ++Y  +  G  I G I  A + +  ML   + P+   + ++I G+ + 
Sbjct: 329 NDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQM 388

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G++  +F +++ MLS G+  ++ T+  L+ +  + G I +A  L  EM + G+ PD+ TY
Sbjct: 389 GNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTY 448

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
                   + G +  A++LY+EM  + I P+    + +I G   +G + EA+  F  +  
Sbjct: 449 --------SRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTK 500

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKA 560
             +A + I + I+   Y ++    +A
Sbjct: 501 SDVAEEIILYNIMIDGYAKLGNIGEA 526



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 184/419 (43%), Gaps = 46/419 (10%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++  LC  G+I  A+ L  +M   G  PD+LT++         G +E+A  +  EM 
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEMC 464

Query: 181 EMRPSPN---CAT--------------------------------YNAFITGYCRVNELD 205
             R  PN   C+                                 YN  I GY ++  + 
Sbjct: 465 SKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIG 524

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +A+  +  +   GI P  VT N L++  CKKG L +AVK L  +     G   + V T T
Sbjct: 525 EAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVH--GLVPTSV-TYT 581

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            LM+ Y + GD      + ++M  K I+   + Y V++ G C  G +  +      M  R
Sbjct: 582 TLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYAR 641

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  PD ITYNT++   CK   L +A   +  + +  + P  ++Y  +I GLC++G++  A
Sbjct: 642 GLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDA 701

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
              L+++ ++S+      +  II  +   GD+ NA      M+  G   ++  ++A+I  
Sbjct: 702 DRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINR 761

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
             +   I DA      ML  GI PD     +++ A    G  +   +++  M++ G+ P
Sbjct: 762 LCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 167/362 (46%), Gaps = 24/362 (6%)

Query: 200 RVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           RV+  D AL LF  + N  G R +RV+  I+ H + +KG   +  + L + + +++G  +
Sbjct: 91  RVDNSDSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQ-MVEEEGSGS 149

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           +  +    L+ + F++ D                  + V +++L   +     +  A   
Sbjct: 150 APSLCE--LLCNSFRDWD-----------------LNNVVWDMLACAYSRAEMVHDALFV 190

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             +M        + TYN+LL  L      D     Y  +  +GV  ++ +   +I GLC 
Sbjct: 191 LAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCR 247

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
              +  A  FL     +   P    +N ++ G+ + G +  A S   +M+ +G+  +V++
Sbjct: 248 QSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYS 307

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N L+      GS+ +A     +M   G+ PD+ TYN+L      LG I  A ++   ML
Sbjct: 308 YNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRML 367

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             G+ PD++TYT LI GHC  GN++E+ ++  K+ + GL +  + + +L     +    D
Sbjct: 368 LNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRID 427

Query: 559 KA 560
           +A
Sbjct: 428 EA 429



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 68/139 (48%)

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV  N +T   LI    R   + DA +  +E   +   P V ++N L+   C +G + +A
Sbjct: 230 GVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVA 289

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
              +  M++ G+ PD+ +Y  L+ G C  G+M+EA E    ++  G+  D + + IL   
Sbjct: 290 KSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANG 349

Query: 551 YRRMKESDKARDIHQKWLL 569
           +R +     A  + Q+ LL
Sbjct: 350 FRILGLISGAWKVVQRMLL 368


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 201/387 (51%), Gaps = 9/387 (2%)

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           KIGD+E   +V +EM + R   N  T+N FI G CR  +L+KA      M   GI PN V
Sbjct: 180 KIGDVE---YVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVV 236

Query: 225 THNILVHALCKKGLLGDAVK---FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           T+N LV   CK+G  G   K   F+ E+LA+   K   + +T   L+D + K+ +   A 
Sbjct: 237 TYNTLVDGYCKRGSAGKMYKAEAFMKEMLAN---KICPNEVTFNTLIDGFCKDENVAAAK 293

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
             + +M ++ ++ +IV YN LING C NG +  A   + +M+  G  P+++TYN L+N  
Sbjct: 294 KAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGF 353

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK+  + EA+  +  +SK  + P+ I++ T+I   C  G + +      SML++ ++P  
Sbjct: 354 CKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNV 413

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +N +I G  R  DL  A  + + M + G+  +V T+N LI    +     +A  L  E
Sbjct: 414 STYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNE 473

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           M   G+ P+  TYN L+   C  G +  AL +   M +    P+++TY  LIKG+C    
Sbjct: 474 MFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINK 533

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILK 548
           ++ A  +  ++   GL  +   + I++
Sbjct: 534 LEAANGLLNEMLEKGLNPNRTTYDIVR 560



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 191/380 (50%), Gaps = 6/380 (1%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           KIG   ++ ++MI++    ++ T N  +N LC+ G L KA+  I +M     SPN  TYN
Sbjct: 180 KIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYN 239

Query: 193 AFITGYCR---VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
             + GYC+     ++ KA      M  N I PN VT N L+   CK   +  A K   E+
Sbjct: 240 TLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEM 299

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
                     +++T   L++    NG   +A+ LW+ M    ++ +IV YN LINGFC  
Sbjct: 300 QKQG---LKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKK 356

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
             +  A   F  + K+  +P+VIT+NT+++  CK+G ++E       +   G+ P+  +Y
Sbjct: 357 KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTY 416

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             +I GLC   D+  A+E L  M  K +  +   +N++IDG  +     NA  + + M +
Sbjct: 417 NCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFN 476

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+  N  T+N L+      G +  A +++  M  +   P+V TYN+LI   C +  +  
Sbjct: 477 LGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEA 536

Query: 490 ALQLYDEMLRRGITPDIITY 509
           A  L +EML +G+ P+  TY
Sbjct: 537 ANGLLNEMLEKGLNPNRTTY 556



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 192/383 (50%), Gaps = 12/383 (3%)

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  ++   + N++    +++  M    I  N  T NI ++ LC+ G L  A        A
Sbjct: 169 NPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAED------A 222

Query: 252 DDDGKA---TSDVITSTILMDSYFKNGDK---FQALALWNDMFQKNIQTDIVAYNVLING 305
            +D KA   + +V+T   L+D Y K G     ++A A   +M    I  + V +N LI+G
Sbjct: 223 IEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDG 282

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           FC + ++++A   F +M K+G  P+++TYN+L+N LC  GKL+EA   +  +   G+ P+
Sbjct: 283 FCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPN 342

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++Y  +I G C    + +A +    + ++ +VP    +N +ID Y + G +   FS+  
Sbjct: 343 IVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCS 402

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            ML  G+  NV T+N LI    R   +  A  L  EM   G+  DV TYN+LI   C   
Sbjct: 403 SMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKND 462

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
               A +L +EM   G+ P+ +TY  L+ G+C  G +K A  V  +++      + + + 
Sbjct: 463 KSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYN 522

Query: 546 ILKKRYRRMKESDKARDIHQKWL 568
           +L K Y ++ + + A  +  + L
Sbjct: 523 VLIKGYCKINKLEAANGLLNEML 545



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 164/341 (48%), Gaps = 19/341 (5%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK+  A    ++M+     P+ +T N L++  CK  ++  A     EM +    PN  T
Sbjct: 251 AGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVT 310

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN+ I G C   +L++A+ L+  M   G++PN VT+N L++  CKK ++ +A K   +V 
Sbjct: 311 YNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVS 370

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             +      +VIT   ++D+Y K G   +  +L + M  + I  ++  YN LI G C   
Sbjct: 371 KQE---LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQ 427

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           D+ +A     +M  +G   DV+TYN L++ LCK  K   A      +   G+ P+ ++Y 
Sbjct: 428 DLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYN 487

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T++ G C+ G +  A      M ++   P    +NV+I GY +   L  A  + + ML  
Sbjct: 488 TLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEK 547

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
           G++ N  T++ + L                EML  G  PD+
Sbjct: 548 GLNPNRTTYDIVRL----------------EMLEKGFSPDI 572



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 151/286 (52%), Gaps = 21/286 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC  GK+  A+ L  KM+  G  P+++T+N L+N  CK   +++A  V  ++S+ 
Sbjct: 313 SLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQ 372

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  T+N  I  YC+   +++   L S+M + GI PN  T+N L+  LC+K  L  A
Sbjct: 373 ELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAA 432

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L E+   ++     DV+T  IL+D   KN     A  L N+MF   ++ + V YN L
Sbjct: 433 KELLNEM---ENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTL 489

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+C+ G + +A     +M K    P+V+TYN L+   CK  KL+ A+     + + G+
Sbjct: 490 MDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGL 549

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP--EPHIWNV 406
            P++ +Y           DIV+     L MLEK   P  E H++N+
Sbjct: 550 NPNRTTY-----------DIVR-----LEMLEKGFSPDIEGHLYNI 579



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 144/285 (50%), Gaps = 3/285 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C    +  A     +M ++G  P+++T+N L+N LC  G LE+A  +  +M  +
Sbjct: 278 TLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGL 337

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYNA I G+C+   + +A  +F  ++   + PN +T N ++ A CK+G++ + 
Sbjct: 338 GLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEG 397

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                 +L  D+G    +V T   L+    +  D   A  L N+M  K ++ D+V YN+L
Sbjct: 398 FSLCSSML--DEG-ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNIL 454

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C N    +A     +M   G  P+ +TYNTL++  C +GKL  A +    + K   
Sbjct: 455 IDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERK 514

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            P+ ++Y  +I+G C    +  A   L  MLEK + P    ++++
Sbjct: 515 QPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 137/276 (49%), Gaps = 3/276 (1%)

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
           D G+  +  +   +L+ +Y KN +   A   +        +  + + N L++       I
Sbjct: 122 DGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKI 181

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
                 + +M+KR    ++ T+N  +N LC+ GKL++A      +   G++P+ ++Y T+
Sbjct: 182 GDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTL 241

Query: 373 IQGLCIHGD---IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
           + G C  G    + KA  F+  ML   + P    +N +IDG+ +  +++ A    + M  
Sbjct: 242 VDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQK 301

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+  N+ T+N+LI      G + +A  L  +M+  G+ P++ TYN LI   C    +  
Sbjct: 302 QGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKE 361

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           A +++D++ ++ + P++IT+  +I  +C  G M+E 
Sbjct: 362 ATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEG 397



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 67/128 (52%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  +I  LC   K   A  L  +M   G  P+ +T+N L++  C  G L+ A 
Sbjct: 444 LKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAAL 503

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           +V   M + R  PN  TYN  I GYC++N+L+ A  L + M   G+ PNR T++I+   +
Sbjct: 504 NVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEM 563

Query: 234 CKKGLLGD 241
            +KG   D
Sbjct: 564 LEKGFSPD 571



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 3/148 (2%)

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
           I ++++  Y +  +L  A+        +G   ++ + N L+ A  +   I D   + KEM
Sbjct: 132 IIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEM 191

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN- 521
           +   I  ++ T+N+ I   C  G ++ A    ++M   GI+P+++TY  L+ G+C RG+ 
Sbjct: 192 IKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSA 251

Query: 522 --MKEAEEVFAKIQTLGLAIDHIPFRIL 547
             M +AE    ++    +  + + F  L
Sbjct: 252 GKMYKAEAFMKEMLANKICPNEVTFNTL 279


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 217/439 (49%), Gaps = 14/439 (3%)

Query: 109 PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           PV  T  T       +I  LCL G++  A  L  KM+ KG   DV+T+  +VN +CK+GD
Sbjct: 8   PVVITFNT-------LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
            + A +++ +M E    P+   Y+A I   C+      A +LFS M   GI PN  T+N 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++   C  G   DA + L +++   + +   DV+T   L+ +  K G  F+A  L ++M 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMI---EREINPDVLTFNALISASVKEGKLFEAEKLCDEML 177

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            + I  D V YN +I GFC +     A   F  M      PDV+T+NT+++  C+  ++D
Sbjct: 178 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVD 233

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           E       +S+ G+  +  +Y T+I G C   ++  A++    M+   V P+    N+++
Sbjct: 234 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 293

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
            G+     L  A  + +++    +  +   +N +I    +G  + +A+ L   + + G+ 
Sbjct: 294 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 353

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PDV TYN++I   C    I  A  L+ +M   G  PD  TY  LI+G    G + ++ E+
Sbjct: 354 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 413

Query: 529 FAKIQTLGLAIDHIPFRIL 547
            +++++ G + D    +++
Sbjct: 414 ISEMRSNGFSGDAFTIKMV 432



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 185/383 (48%), Gaps = 12/383 (3%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           K  L+ L  M +T      ++ D   + A+I  LC  G    A +L  +M++KG  P+V 
Sbjct: 62  KSALNLLSKMEET-----HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 116

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+N +++  C  G    A  ++R+M E   +P+  T+NA I+   +  +L +A  L   M
Sbjct: 117 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 176

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            +  I P+ VT+N +++  CK     DA           D  A+ DV+T   ++D Y + 
Sbjct: 177 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-------DLMASPDVVTFNTIIDVYCRA 229

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
               + + L  ++ ++ +  +   YN LI+GFC   ++++A   F +M+  G  PD IT 
Sbjct: 230 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 289

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N LL   C+  KL+EA   + V+  + +  D ++Y  II G+C    + +A +   S+  
Sbjct: 290 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 349

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             V P+   +NV+I G+     +S+A  +   M   G   +  T+N LI    + G I  
Sbjct: 350 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 409

Query: 455 AFSLKKEMLLDGIFPDVFTYNLL 477
           +  L  EM  +G   D FT  ++
Sbjct: 410 SIELISEMRSNGFSGDAFTIKMV 432



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 140/282 (49%), Gaps = 4/282 (1%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +  +   ++ +N LING CL G +  A A   +M+ +G   DV+TY T++N +CK G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
              A +    + +T + PD + Y  II  LC  G    A+     MLEK + P    +N 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +IDG+   G  S+A  +   M+   ++ +V TFNALI A  + G +F+A  L  EML   
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           IFPD  TYN +I   C       A  ++D M     +PD++T+  +I  +C    + E  
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGM 236

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           ++  +I   GL  +   +  L   +  +   + A+D+ Q+ +
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 278



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 154/337 (45%), Gaps = 31/337 (9%)

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
           T  VIT   L++     G   +A AL N M  K +  D+V Y  ++NG C  GD  SA  
Sbjct: 7   TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALN 66

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
              +M +    PDV+ Y+ +++ LCK G   +A + +  + + G+AP+  +Y  +I G C
Sbjct: 67  LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 126

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS-------- 429
             G    A+  L  M+E+ + P+   +N +I    + G L  A  + D ML         
Sbjct: 127 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 186

Query: 430 ------FG-----------------VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
                 +G                  S +V TFN +I    R   + +   L +E+   G
Sbjct: 187 TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 246

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           +  +  TYN LI   C + +++ A  L+ EM+  G+ PD IT   L+ G C    ++EA 
Sbjct: 247 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 306

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           E+F  IQ   + +D + + I+     +  + D+A D+
Sbjct: 307 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 343



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 133/254 (52%), Gaps = 8/254 (3%)

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M++ G  P VIT+NTL+N LC +G++ EA+     +   G+  D ++Y TI+ G+C  GD
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
              A   L  M E  + P+  I++ IID   + G  S+A  +   ML  G++ NVFT+N 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I      G   DA  L ++M+   I PDV T+N LI AS   G +  A +L DEML R 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA- 560
           I PD +TY  +I G C      +A+ +F     L  + D + F  +   Y R K  D+  
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGM 236

Query: 561 ---RDIHQKWLLRN 571
              R+I ++ L+ N
Sbjct: 237 QLLREISRRGLVAN 250


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 191/386 (49%), Gaps = 3/386 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  +CL  +   A     KM++ G  PD++T   L+N  C    +E A  +  ++  M 
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY   I   C+   L+ A+ LF+ M  NG RPN VT+N LV  LC+ G  GDA 
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L +++     +   +VIT T L+D++ K G   +A  L+N M Q ++  D+  Y  LI
Sbjct: 244 WLLRDMMKR---RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C+ G +  A   F  M + G  P+ + Y TL++  CK  ++++    +  +S+ GV 
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            + I+Y  +IQG C+ G    A+E    M  +   P+   +NV++DG    G +  A  I
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M    +  N+ T+  +I    + G + DAF L   +   G+ P+V TY  +I   C 
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480

Query: 484 LGHIHLALQLYDEMLRRGITPDIITY 509
            G IH A  L+ +M   G  P+   Y
Sbjct: 481 RGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 211/476 (44%), Gaps = 43/476 (9%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           +L   + LD    M  + P+   +  D+ R ++VI  +    +    + L  +M   G  
Sbjct: 61  NLQFNDALDLFTRMVHSRPLPSII--DFTRLLSVIAKM---NRYDVVISLFEQMQILGIP 115

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P + T N +++ +C      +A   + +M ++   P+  T+ + + GYC  N ++ A+ L
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIAL 175

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  +   G +PN VT+  L+  LC                                    
Sbjct: 176 FDQILGMGFKPNVVTYTTLIRCLC------------------------------------ 199

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             KN     A+ L+N M     + ++V YN L+ G C  G    A      M+KR   P+
Sbjct: 200 --KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPN 257

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           VIT+  L++   K GKL EA   Y V+ +  V PD  +Y ++I GLC++G + +AR+   
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M      P   I+  +I G+ +   + +   I   M   GV +N  T+  LI      G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
               A  +  +M      PD+ TYN+L+   C  G +  AL +++ M +R +  +I+TYT
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            +I+G C  G +++A ++F  + + G+  + I +  +   + R     +A  + +K
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 32/280 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  LC  G+ G A WL R M+++   P+V+T   L++   K+G L +A  +   M +M
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY + I G C    LD+A  +F  M  NG  PN V +  L+H  CK   + D 
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347

Query: 243 VKFLGE-----VLAD---------------------------DDGKATSDVITSTILMDS 270
           +K   E     V+A+                              +A  D+ T  +L+D 
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
              NG   +AL ++  M ++ +  +IV Y ++I G C  G +  AF  FC +  +G  P+
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           VITY T+++  C++G + EA   +  + + G  P++  YK
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 213/425 (50%), Gaps = 7/425 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI   C+ G+   AL     MI++G  P V+T N ++N  CK G++ +A  +   + EM 
Sbjct: 97  VINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMG 156

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SPN   YN  + GY ++ E+D+A  L+  M   GI P+ +T NILV    K G   D  
Sbjct: 157 FSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGD 216

Query: 244 KFLGE--VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           + L +  VL     ++  D+  S +        G   +A+    DM +K +   I+A+N 
Sbjct: 217 RLLKDISVLGLLPDRSLFDISVSGLCWA-----GRLDEAMEFLMDMLEKGLSPSIIAFNS 271

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +I  +   G    AF  +  M+  G  P   T ++LL  L   G+L EA+   G + + G
Sbjct: 272 VIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKG 331

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           ++ + +++  ++      GD+V A+     M  + + P+   ++  IDG  + G +  A+
Sbjct: 332 LSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAY 391

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           ++   ML  G+  N F +N+LI    + G + +A  L+K M   G+ PD+FT N++IG  
Sbjct: 392 NVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGL 451

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C  G +  A+ ++ +M + G++PDIITY  LI G+C   +M  A+ +  ++   G   D 
Sbjct: 452 CKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDL 511

Query: 542 IPFRI 546
             + I
Sbjct: 512 TTYNI 516



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 224/492 (45%), Gaps = 45/492 (9%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLG-GKIGTALWLRRKMIQKGTVPDVL 154
           + L+ L  MR+ G VR +        VA++  L L  G  G    L + +I++G  P   
Sbjct: 4   QALEILGRMREVG-VRPSASG-----VAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKY 57

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T + ++   C+ G +   + ++  M +    PN   YN  I   C       AL  F+ M
Sbjct: 58  TFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLM 117

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G  P  VT N +++A CK+G + +A K    +    +   + + I    LM+ Y K 
Sbjct: 118 IERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL---KEMGFSPNAIMYNTLMNGYVKM 174

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVL-------------------------------- 302
            +  QA  L+ +M +K I  D + +N+L                                
Sbjct: 175 REIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLF 234

Query: 303 ---INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
              ++G C  G +  A  +   ML++G  P +I +N+++    + G  D+A   Y ++  
Sbjct: 235 DISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVH 294

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ P   +  +++ GL I+G + +A E +  M+EK +      + V++D + + GD+  
Sbjct: 295 FGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVG 354

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A S+   M   G+  +V  F+A I   ++ G + +A+++  EML  G+ P+ F YN LI 
Sbjct: 355 AQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLIC 414

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C  G ++ AL+L   M  RG+ PDI T   +I G C +G M+ A  VF  +   GL+ 
Sbjct: 415 GFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSP 474

Query: 540 DHIPFRILKKRY 551
           D I +  L   Y
Sbjct: 475 DIITYNTLINGY 486



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 159/336 (47%), Gaps = 38/336 (11%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G +PD    +  V+ LC  G L++A   + +M E   SP+   +N+ I  Y +    DKA
Sbjct: 226 GLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKA 285

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
              +  M + G+ P+  T + L+  L   G L +A + +G+++  + G + ++ +  T+L
Sbjct: 286 FEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMI--EKGLSVNN-MAFTVL 342

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVA----------------------------- 298
           +D +FK GD   A +LW +M ++ I  D+VA                             
Sbjct: 343 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 402

Query: 299 ------YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
                 YN LI GFC  G ++ A      M  RG LPD+ T N ++  LCKQG++  A +
Sbjct: 403 IPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 462

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            +  + +TG++PD I+Y T+I G C   D+V A   +  M      P+   +N+ I G+ 
Sbjct: 463 VFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFC 522

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
               ++ A  + D ++S G+ S  F     + A T+
Sbjct: 523 SSRRMNRAVLMLDELVSAGILSFSFACPPTLNAHTK 558



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 3/240 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  L + G++  A  L  +MI+KG   + +    L+++  K GD+  A  +  EM   
Sbjct: 306 SLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR 365

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   ++AFI G  +   +++A ++F  M   G+ PN   +N L+   CK G L +A
Sbjct: 366 GIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEA 425

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K   E +    G    D+ T+ +++    K G    A+ ++ DM Q  +  DI+ YN L
Sbjct: 426 LKL--EKVMRHRG-LLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTL 482

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING+C   D+ +A     +M   G  PD+ TYN  ++  C   +++ A      L   G+
Sbjct: 483 INGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGI 542



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 122/288 (42%)

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
           FQAL +   M +  ++       +L       GD  + +  F  +++RG  P   T++ +
Sbjct: 3   FQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGI 62

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +   C++G +        ++ K    P+  +Y  +I   CI G    A  +   M+E+  
Sbjct: 63  ILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGC 122

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P    +N +I+ + + G++  A  + D +   G S N   +N L+    +   I  A  
Sbjct: 123 NPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANM 182

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L +EM   GI PD  T+N+L+      G      +L  ++   G+ PD   +   + G C
Sbjct: 183 LYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLC 242

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
             G + EA E    +   GL+   I F  +   Y +    DKA + ++
Sbjct: 243 WAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYK 290



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 88/183 (48%)

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A E L  M E  V P      ++     R GD  N + +   ++  G     +TF+ +I
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
           L   R G I    SL   M      P+ F YN++I A C  G    AL  ++ M+ RG  
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P ++T+  +I   C  GN+ EA ++F  ++ +G + + I +  L   Y +M+E D+A  +
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183

Query: 564 HQK 566
           +++
Sbjct: 184 YEE 186


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 234/478 (48%), Gaps = 11/478 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L   LD +K +R       ++  +   +  +I   C  G++  A  + + M+  G  PDV
Sbjct: 420 LGPALDLIKYLRSR-----SISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDV 474

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T++ L+N +CK+G + +   ++  M +    PN   Y   +  +C+     +AL  F  
Sbjct: 475 ITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVD 534

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           +  +G+  N V HN L+ +  ++G++ +A +F   +      K + DV +   ++DSY +
Sbjct: 535 IYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYM---SRMKISFDVASFNCIIDSYCQ 591

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G+  +A +++++M +     DI  Y  L+ G C  G +  A  +   +L++    D  T
Sbjct: 592 RGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKT 651

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
            NTLL  +CK G LDEA      +    + PD  +Y  ++ G C  G +V A   L  ML
Sbjct: 652 LNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMML 711

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNA-FSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           EK +VP+   +  +++G    G +  A +  ++++   G+ ++   +N+++    +GG I
Sbjct: 712 EKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQI 771

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +   L + M  + ++P   +YN+L+      G +   L LY +M++ GI PD +TY  L
Sbjct: 772 NEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLL 831

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI--HQKWL 568
           I G C  G ++ A +   K+   G+  D++ F IL K +    +   A  +  + KW+
Sbjct: 832 IFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWV 889



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 210/416 (50%), Gaps = 3/416 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+  +AL +   M + G   D+ T+N ++++LCK+    +A  +++ M E+  +P+  +Y
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I G+    +++ A+++F+ M    ++P+  T+  L+   C+ G   +A + L E+  
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEM-- 395

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
              G   S+ +T + L++ Y K+     AL L   +  ++I  +   Y +LI+GFC  G+
Sbjct: 396 QITGVRPSE-LTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGE 454

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +S A      ML  G  PDVITY+ L+N +CK G + E       + K+GV P+ + Y T
Sbjct: 455 VSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTT 514

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++   C  G   +A ++ + +    +V    I N ++  + R G ++ A   +  M    
Sbjct: 515 LVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMK 574

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +S +V +FN +I +  + G++ +AFS+   M+  G  PD+ TY  L+   C  GH+  A 
Sbjct: 575 ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAK 634

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +    +L +    D  T   L+ G C  G + EA ++  K+ T  +  D   + IL
Sbjct: 635 EFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTIL 690



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 203/434 (46%), Gaps = 3/434 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  +I  LC   +   A  L ++M +    PD  ++N L++     G +  A 
Sbjct: 295 IEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAI 354

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           ++  +M      P+ ATY A I GYCR    D+A  +   M   G+RP+ +T++ L++  
Sbjct: 355 YIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGY 414

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   LG A+  +  + +      + +    TIL+D + + G+  +A  +   M    I 
Sbjct: 415 CKHSKLGPALDLIKYLRSRS---ISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGID 471

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D++ Y+ LING C  G I        +M K G LP+ + Y TL+   CK G   EA  +
Sbjct: 472 PDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKY 531

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  + ++G+  + + +  ++      G I +A +F   M    +  +   +N IID Y +
Sbjct: 532 FVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQ 591

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G++  AFS+ D M+  G   ++ T+ +L+    +GG +  A      +L      D  T
Sbjct: 592 RGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKT 651

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            N L+   C  G +  AL L ++M+ R I PD  TYT L+ G C RG +  A  +   + 
Sbjct: 652 LNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMML 711

Query: 534 TLGLAIDHIPFRIL 547
             GL  D I +  L
Sbjct: 712 EKGLVPDTIAYTCL 725



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 207/434 (47%), Gaps = 12/434 (2%)

Query: 101 LKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           LK MR+    P  C+  T       +I      GKI  A+++  +M+++   P V T+  
Sbjct: 322 LKRMREVNLTPDECSYNT-------LIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTA 374

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           L++  C+ G  ++A  V+ EM      P+  TY+A + GYC+ ++L  AL L   + +  
Sbjct: 375 LIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRS 434

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           I  NR  + IL+   C+ G +  A + L  +LAD       DVIT + L++   K G   
Sbjct: 435 ISINRTMYTILIDGFCQLGEVSKAKQILKCMLADG---IDPDVITYSALINGMCKMGMIH 491

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +   + + M +  +  + V Y  L+  FC  G    A  YF  + + G + + + +N LL
Sbjct: 492 ETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALL 551

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
               ++G + EA  F   +S+  ++ D  S+  II   C  G++++A     +M+     
Sbjct: 552 CSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWP 611

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P+   +  ++ G  + G L  A      +L    + +  T N L++   + G++ +A  L
Sbjct: 612 PDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDL 671

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            ++M+   I PD +TY +L+   C  G +  AL L   ML +G+ PD I YT L+ G   
Sbjct: 672 CEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVN 731

Query: 519 RGNMKEAEEVFAKI 532
            G +K A  +F +I
Sbjct: 732 EGQVKAASYMFQEI 745



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 203/444 (45%), Gaps = 18/444 (4%)

Query: 110  VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
            VR     D   + +++R LC GG +  A      +++K    D  T N L+  +CK G L
Sbjct: 606  VRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTL 665

Query: 170  EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            ++A  +  +M      P+  TY   + G+C+  ++  AL L   M   G+ P+ + +  L
Sbjct: 666  DEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCL 725

Query: 230  VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
            ++ L  +G +  A     E++  +   A  D I    +M+ Y K G   +   L  +M +
Sbjct: 726  LNGLVNEGQVKAASYMFQEIICKEGLYA--DCIAYNSMMNGYLKGGQINEIERLMRNMHE 783

Query: 290  KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
              +     +YN+L++G+   G +S     +  M+K G  PD +TY  L+  LC+ G ++ 
Sbjct: 784  NEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEI 843

Query: 350  ASHFYGVLSKTGVAPDQISYKTIIQGLCIH----------------GDIVKAREFLLSML 393
            A  F   +   GV PD +++  +I+                     GDI  A E    M 
Sbjct: 844  AVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMK 903

Query: 394  EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
               VVP     + I+ G  +CG +  A  +   ++  G+   + TF  L+    +   I 
Sbjct: 904  ALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKID 963

Query: 454  DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            DAF LK+ M   G+  DV TYN+LI   CN   I  AL LY+EM  +G+ P+I TY  L 
Sbjct: 964  DAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLT 1023

Query: 514  KGHCARGNMKEAEEVFAKIQTLGL 537
                A G M++ E++   I+  G+
Sbjct: 1024 GAMYATGTMQDGEKLLKDIEDRGI 1047



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/479 (24%), Positives = 212/479 (44%), Gaps = 55/479 (11%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++   C  G    AL     + + G V + + HN L+    + G + +A+   + MS
Sbjct: 512 YTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMS 571

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            M+ S + A++N  I  YC+   + +A  ++  M  +G  P+  T+  L+  LC+ G L 
Sbjct: 572 RMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLV 631

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A +F+  +L   +     D  T   L+    K+G   +AL L   M  +NI  D   Y 
Sbjct: 632 QAKEFMVYLL---EKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYT 688

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH-FYGVLSK 359
           +L++GFC  G +  A      ML++G +PD I Y  LLN L  +G++  AS+ F  ++ K
Sbjct: 689 ILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICK 748

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+  D I+Y +++ G    G I +    + +M E  V P    +N+++ GY + G LS 
Sbjct: 749 EGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSR 808

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
              +   M+  G+  +  T+  LI      G I  A    ++M+L+G+FPD   +++LI 
Sbjct: 809 TLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIK 868

Query: 480 AS---------------------------------------------------CNLGHIH 488
           A                                                    C  G + 
Sbjct: 869 AFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVE 928

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            A+ ++  ++R G+ P I T+T L+ G C    + +A  +   +++ GL +D + + +L
Sbjct: 929 EAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVL 987



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 192/408 (47%), Gaps = 4/408 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M + G    + + N ++N L  I   E     ++E  + +   +  T N  +   C   +
Sbjct: 186 MDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGK 245

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           L KA  +   M N  + PN VT+N +++   KKG    A++ L ++   +     +D+ T
Sbjct: 246 LSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDM---EKNGIEADLYT 301

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             I++D   K     +A  L   M + N+  D  +YN LI+GF   G I+ A   F QML
Sbjct: 302 YNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQML 361

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           ++   P V TY  L++  C+ G+ DEA      +  TGV P +++Y  ++ G C H  + 
Sbjct: 362 RQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLG 421

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A + +  +  +S+     ++ ++IDG+ + G++S A  I   ML+ G+  +V T++ALI
Sbjct: 422 PALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALI 481

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G I +   +   M   G+ P+   Y  L+   C  GH   AL+ + ++ R G+ 
Sbjct: 482 NGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLV 541

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            + + +  L+      G + EAE+    +  + ++ D   F  +   Y
Sbjct: 542 ANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSY 589



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 137/305 (44%), Gaps = 1/305 (0%)

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           +++ +  +L+++Y K G    A A    M +   +  + + N ++N           + +
Sbjct: 158 TNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLF 217

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             + L R F  DV T N +LN LC QGKL +A      + K    P+ ++Y TI+     
Sbjct: 218 LKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLPNAVTYNTILNWYVK 276

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G    A   L  M +  +  + + +N++ID   +    + A+ +   M    ++ +  +
Sbjct: 277 KGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECS 336

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N LI      G I  A  +  +ML   + P V TY  LI   C  G    A ++  EM 
Sbjct: 337 YNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQ 396

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             G+ P  +TY+ L+ G+C    +  A ++   +++  ++I+   + IL   + ++ E  
Sbjct: 397 ITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVS 456

Query: 559 KARDI 563
           KA+ I
Sbjct: 457 KAKQI 461



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 123/286 (43%), Gaps = 36/286 (12%)

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP-------- 364
           S+ F+   + + R    ++ + + L+N   K+GK+ +A+     + + G           
Sbjct: 142 SAIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNI 201

Query: 365 ---------------------------DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
                                      D  +   ++  LC  G + KA E +L  ++   
Sbjct: 202 LNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKA-ESMLQKMKNCR 260

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           +P    +N I++ Y + G   +A  I D M   G+ ++++T+N +I    +      A+ 
Sbjct: 261 LPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYL 320

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L K M    + PD  +YN LI      G I+LA+ ++++MLR+ + P + TYT LI G+C
Sbjct: 321 LLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYC 380

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
             G   EA  V  ++Q  G+    + +  L   Y +  +   A D+
Sbjct: 381 RNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDL 426


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 191/379 (50%), Gaps = 11/379 (2%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           L+ +LC  G   +A  V+         P+  +YNA + GYC   +LD A  L + M    
Sbjct: 96  LIKKLCASGRTAEARRVLASCE-----PDVMSYNAMVAGYCVTGQLDNARRLVAAMP--- 147

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           + P+  T+N L+  LC +G   +A+  L ++L         DV+T TIL+++  K     
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRG---CVPDVVTYTILLEATCKRSGYK 204

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           QA+ L ++M  K    DIV YNV++NG C  G +  A  +   +   G  P+ ++YN +L
Sbjct: 205 QAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVL 264

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             LC   + ++A      +S+ G  P+ +++  +I  LC  G +  A E L  + +    
Sbjct: 265 KGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCT 324

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P    +N I+  + +   +  A +  +LM+S G   ++ ++N L+ A  RGG +  A  L
Sbjct: 325 PNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVEL 384

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
             ++   G  P + +YN +I      G    AL+L +EM+ +G+ PDIITY+ +  G C 
Sbjct: 385 LHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCR 444

Query: 519 RGNMKEAEEVFAKIQTLGL 537
            G ++EA + F K+Q +G+
Sbjct: 445 EGRIEEAIKAFCKVQDMGI 463



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 201/424 (47%), Gaps = 38/424 (8%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  +IR LC  G+   AL +   M+++G VPDV+T+  L+   CK    ++A 
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM +   +P+  TYN  + G C+   +D A+    ++ + G  PN V++NI++  L
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGL 267

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C      DA K + E                                      M +K   
Sbjct: 268 CTAERWEDAEKLMAE--------------------------------------MSRKGRP 289

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++V +N+LI+  C  G +  A     Q+ K G  P+ ++YN +L+  CKQ K+D A  F
Sbjct: 290 PNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF 349

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             ++  +G  PD +SY T++  LC  G++  A E L  + +K   P    +N +IDG  +
Sbjct: 350 VELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK 409

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G    A  + + M++ G+  ++ T++ +     R G I +A     ++   GI P+   
Sbjct: 410 AGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVL 469

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN ++   C     H A+ L+  M+  G  P+  TYT LI+G    G +KEA E+ A++ 
Sbjct: 470 YNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELC 529

Query: 534 TLGL 537
           + G+
Sbjct: 530 SRGV 533



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 129/286 (45%), Gaps = 38/286 (13%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V++ LC   +   A  L  +M +KG  P+V+T N L++ LC+ G +E A  ++ ++ +  
Sbjct: 263 VLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYG 322

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN  +YN  +  +C+  ++D+A+     M ++G  P+ V++N L+ ALC+ G +  AV
Sbjct: 323 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAV 382

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY---- 299
           + L ++    D   T  +I+   ++D   K G   +AL L N+M  K +Q DI+ Y    
Sbjct: 383 ELLHQL---KDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTIS 439

Query: 300 -------------------------------NVLINGFCLNGDISSAFAYFCQMLKRGFL 328
                                          N ++ G C      SA   F  M+  G +
Sbjct: 440 SGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCM 499

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           P+  TY  L+  L  +G + EA      L   GV    +  K  I+
Sbjct: 500 PNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVNKGAIR 545


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 209/422 (49%), Gaps = 6/422 (1%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
            D+ R ++ I  +    K    ++L  +M   G   ++ T N L+N  C+   L  A   
Sbjct: 82  ADFSRLLSAISKM---KKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           + +M ++   P+  T+ + + G+CR + +  AL++F  M   G +PN V +N ++  LCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
              + +A+  L  +  D  G    DV+T   L+     +G    A  + + M ++ I  D
Sbjct: 199 SKQVDNALDLLNRMEKDGIG---PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           +  +N LI+     G +S A  ++ +M++R   PD++TY+ L+  LC   +LDEA   +G
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +   G  PD ++Y  +I G C    +    +    M ++ VV     + ++I GY R G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            L+ A  I   M+  GV  N+ T+N L+      G I  A  +  +M  +G+  D+ TYN
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           ++I   C  G +  A  +Y  +  +G+ PDI TYT ++ G   +G  +EA+ +F K++  
Sbjct: 436 IIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495

Query: 536 GL 537
           G+
Sbjct: 496 GI 497



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 185/378 (48%), Gaps = 3/378 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
            C   ++  AL    KMI+ G  P ++T   L+N  C+   +  A ++  +M  M   PN
Sbjct: 126 FCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPN 185

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
              YN  I G C+  ++D AL L + M  +GI P+ VT+N L+  LC  G   DA + + 
Sbjct: 186 VVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVS 245

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
            +   +      DV T   L+D+  K G   +A   + +M ++++  DIV Y++LI G C
Sbjct: 246 CMTKRE---IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
           +   +  A   F  M+ +G  PDV+TY+ L+N  CK  K++     +  +S+ GV  + +
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y  +IQG C  G +  A E    M+   V P    +NV++ G    G +  A  I   M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              G+ +++ T+N +I    + G + DA+ +   +   G+ PD++TY  ++      G  
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482

Query: 488 HLALQLYDEMLRRGITPD 505
             A  L+ +M   GI P+
Sbjct: 483 READALFRKMKEDGILPN 500



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 194/397 (48%), Gaps = 38/397 (9%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M + RP P+ A ++  ++   ++ + D  ++L+  M   GI  N  T NIL++  C+   
Sbjct: 72  MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L  A+ FLG+++    G   S ++T   L++ + +    + AL +++ M     + ++V 
Sbjct: 132 LSLALSFLGKMIKL--GHEPS-IVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVI 188

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC---------------- 342
           YN +I+G C +  + +A     +M K G  PDV+TYN+L++ LC                
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248

Query: 343 -------------------KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
                              K+G++ EA  FY  + +  + PD ++Y  +I GLC++  + 
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A E    M+ K   P+   ++++I+GY +   + +   +   M   GV  N  T+  LI
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               R G +  A  + + M+  G+ P++ TYN+L+   C+ G I  AL +  +M + G+ 
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            DI+TY  +I+G C  G + +A +++  +   GL  D
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 150/290 (51%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            + LW  M    I  ++   N+L+N FC    +S A ++  +M+K G  P ++T+ +LLN
Sbjct: 100 VIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLN 159

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C+  ++ +A + +  +   G  P+ + Y TII GLC    +  A + L  M +  + P
Sbjct: 160 GFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGP 219

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   +N +I G    G  S+A  +   M    +  +VFTFNALI A  + G + +A    
Sbjct: 220 DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           +EM+   + PD+ TY+LLI   C    +  A +++  M+ +G  PD++TY+ LI G+C  
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
             ++   ++F ++   G+  + + + IL + Y R  + + A +I ++ + 
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 123/235 (52%), Gaps = 3/235 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++  A     +MI++   PD++T++ L+  LC    L++A+ +   M      P+  TY
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  I GYC+  +++  + LF  M+  G+  N VT+ IL+   C+ G L  A +    ++ 
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   ++IT  +L+     NG   +AL +  DM +  +  DIV YN++I G C  G+
Sbjct: 390 ---CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           ++ A+  +C +  +G +PD+ TY T++  L K+G   EA   +  + + G+ P++
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 3/174 (1%)

Query: 401 PH---IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           PH     N++++ + RC  LS A S    M+  G   ++ TF +L+    RG  ++DA  
Sbjct: 113 PHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALY 172

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           +  +M+  G  P+V  YN +I   C    +  AL L + M + GI PD++TY  LI G C
Sbjct: 173 MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           + G   +A  + + +    +  D   F  L     +     +A + +++ + R+
Sbjct: 233 SSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 153/504 (30%), Positives = 234/504 (46%), Gaps = 47/504 (9%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+ MR     R +L  D   +  VIR  C G ++  AL L  +M   G    ++T   L+
Sbjct: 165 LREMR-----RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           +  CK G +++A   ++EM  M    +   Y + I G+C   ELD+   LF  +   G  
Sbjct: 220 DAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS 279

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P  +T+N L+   CK G L +A +    ++   +     +V T T L+D     G   +A
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMI---ERGVRPNVYTYTGLIDGLCGVGKTKEA 336

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           L L N M +K+ + + V YN++IN  C +G ++ A      M KR   PD ITYN LL  
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396

Query: 341 LCKQGKLDEASHFYGVLSKTG--VAPDQISYKTIIQGLC----IH--------------- 379
           LC +G LDEAS    ++ K      PD ISY  +I GLC    +H               
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456

Query: 380 ----------------GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
                           GD+ KA E    + +  +V     +  +IDG+ + G L+ A  +
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M    +  +VF +N L+ +  + GS+  A+ L +EM  D  FPDV ++N++I  S  
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID-HI 542
            G I  A  L   M R G++PD+ TY++LI      G + EA   F K+   G   D HI
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636

Query: 543 PFRILKKRYRRMKESDKARDIHQK 566
              +LK    +  E+DK  ++ +K
Sbjct: 637 CDSVLKYCISQ-GETDKLTELVKK 659



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 226/497 (45%), Gaps = 69/497 (13%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K G A  +   M+++G   +V  HN L+  LC+  +  KA  ++REM      P+  +YN
Sbjct: 122 KTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYN 181

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL-- 250
             I G+C   EL+KAL L + M  +G   + VT  IL+ A CK G + +A+ FL E+   
Sbjct: 182 TVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFM 241

Query: 251 ---AD-----------------DDGKATSD----------VITSTILMDSYFKNGDKFQA 280
              AD                 D GKA  D           IT   L+  + K G   +A
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
             ++  M ++ ++ ++  Y  LI+G C  G    A      M+++   P+ +TYN ++N 
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           LCK G + +A     ++ K    PD I+Y  ++ GLC  GD+ +A + L  ML+ S   +
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421

Query: 401 PHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P +  +N +I G  +   L  A  I DL++    + +  T N L+ +  + G +  A  L
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481

Query: 459 KKEM--------------LLDG---------------------IFPDVFTYNLLIGASCN 483
            K++              ++DG                     + P VF YN L+ + C 
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A +L++EM R    PD++++  +I G    G++K AE +   +   GL+ D   
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601

Query: 544 FRILKKRYRRMKESDKA 560
           +  L  R+ ++   D+A
Sbjct: 602 YSKLINRFLKLGYLDEA 618



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 216/450 (48%), Gaps = 10/450 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E +  LK M+  G     LE D   + ++IR  C  G++     L  +++++G  P  
Sbjct: 228 MDEAMGFLKEMKFMG-----LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N L+   CK+G L++A  +   M E    PN  TY   I G C V +  +AL L + 
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M      PN VT+NI+++ LCK GL+ DAV+ + E++     +   D IT  IL+     
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV-ELMKKR--RTRPDNITYNILLGGLCA 399

Query: 274 NGDKFQALALWNDMFQKNIQTD--IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            GD  +A  L   M + +  TD  +++YN LI+G C    +  A   +  ++++    D 
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +T N LLN   K G +++A   +  +S + +  +  +Y  +I G C  G +  A+  L  
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M    + P    +N ++    + G L  A+ + + M       +V +FN +I    + G 
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           I  A SL   M   G+ PD+FTY+ LI     LG++  A+  +D+M+  G  PD      
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           ++K   ++G   +  E+  K+    + +D 
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKDIVLDK 669



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 196/400 (49%), Gaps = 7/400 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A    RKM++  T  + ++ + L+    ++     A  V+  M +   + N   +N  + 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G CR  E  KA+ L   M  N + P+  ++N ++   C+   L  A++   E+     G 
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM----KGS 206

Query: 257 ATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
             S  ++T  IL+D++ K G   +A+    +M    ++ D+V Y  LI GFC  G++   
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
            A F ++L+RG  P  ITYNTL+   CK G+L EAS  +  + + GV P+  +Y  +I G
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           LC  G   +A + L  M+EK   P    +N+II+   + G +++A  I +LM       +
Sbjct: 327 LCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIF--PDVFTYNLLIGASCNLGHIHLALQL 493
             T+N L+      G + +A  L   ML D  +  PDV +YN LI   C    +H AL +
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YD ++ +    D +T   L+      G++ +A E++ +I 
Sbjct: 447 YDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQIS 486



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 178/407 (43%), Gaps = 55/407 (13%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVN--------ELDKALHLFSTMANNGIR 220
           L + +HV+R++  + P       NAF     ++         +L  A+ +F    ++G  
Sbjct: 13  LRRDEHVVRKL--LNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSS 70

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF---KNGDK 277
                +N++   L +      A  F  ++L  D      + ++ + L++ Y    K G  
Sbjct: 71  LAFAGNNLMAK-LVRSRNHELAFSFYRKMLETD---TFINFVSLSGLLECYVQMRKTGFA 126

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT- 336
           F  LAL   M ++    ++  +N+L+ G C N +   A +   +M +   +PDV +YNT 
Sbjct: 127 FGVLAL---MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTV 183

Query: 337 ----------------------------------LLNCLCKQGKLDEASHFYGVLSKTGV 362
                                             L++  CK GK+DEA  F   +   G+
Sbjct: 184 IRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGL 243

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D + Y ++I+G C  G++ + +     +LE+   P    +N +I G+ + G L  A  
Sbjct: 244 EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I + M+  GV  NV+T+  LI      G   +A  L   M+     P+  TYN++I   C
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC 363

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
             G +  A+++ + M +R   PD ITY  L+ G CA+G++ EA ++ 
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 36/321 (11%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM--SE 181
           +I  LC  G +  A+ +   M ++ T PD +T+N L+  LC  GDL++A  ++  M    
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               P+  +YNA I G C+ N L +AL ++  +       +RVT NIL+++  K G +  
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477

Query: 242 AVKFLGEVLADDDGKATSDVITSTI---------------------------------LM 268
           A++   ++ +D      SD  T+ I                                 L+
Sbjct: 478 AMELWKQI-SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
            S  K G   QA  L+ +M + N   D+V++N++I+G    GDI SA +    M + G  
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           PD+ TY+ L+N   K G LDEA  F+  +  +G  PD     ++++     G+  K  E 
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTEL 656

Query: 389 LLSMLEKSVVPEPHIWNVIID 409
           +  +++K +V +  +   ++D
Sbjct: 657 VKKLVDKDIVLDKELTCTVMD 677



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 131/263 (49%), Gaps = 3/263 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   + A+I  LC   ++  AL +   +++K    D +T N L+N   K GD+ KA  
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           + +++S+ +   N  TY A I G+C+   L+ A  L   M  + ++P+   +N L+ +LC
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G L  A +   E+  D++     DV++  I++D   K GD   A +L   M +  +  
Sbjct: 541 KEGSLDQAWRLFEEMQRDNN---FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D+  Y+ LIN F   G +  A ++F +M+  GF PD    +++L     QG+ D+ +   
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELV 657

Query: 355 GVLSKTGVAPDQISYKTIIQGLC 377
             L    +  D+    T++  +C
Sbjct: 658 KKLVDKDIVLDKELTCTVMDYMC 680



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 74/151 (49%)

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AF +  LML  G + NV+  N L+    R      A SL +EM  + + PDVF+YN +I 
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C    +  AL+L +EM   G +  ++T+  LI   C  G M EA     +++ +GL  
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           D + +  L + +    E D+ + +  + L R
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLER 276



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 106/251 (42%), Gaps = 35/251 (13%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           AF+++ +ML+     + ++ + LL C  +  K   A     ++ K G A +  ++  +++
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           GLC + +  KA   L  M   S++P+                                  
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPD---------------------------------- 176

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
            VF++N +I     G  +  A  L  EM   G    + T+ +LI A C  G +  A+   
Sbjct: 177 -VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
            EM   G+  D++ YT LI+G C  G +   + +F ++   G +   I +  L + + ++
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295

Query: 555 KESDKARDIHQ 565
            +  +A +I +
Sbjct: 296 GQLKEASEIFE 306


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 219/493 (44%), Gaps = 75/493 (15%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           +L L  +M+ +G V D++ +  L++ L K G +E+A  V+R       +PN  TY   + 
Sbjct: 346 SLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVD 405

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            +CR   +D A  +   M    + PN VT + +++ L K+G LG A  ++ ++    D  
Sbjct: 406 AHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKM---KDSG 462

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              +V+T   L+D +FK   +  AL ++ DM  + ++ +    + L+NG   NG+I  A 
Sbjct: 463 IAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAE 522

Query: 317 AYFCQMLKRGFL-----------------------------------PDVITYNTLLNCL 341
           A F  M +RG L                                   PD + YN  +NCL
Sbjct: 523 ALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCL 582

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           C  GK  EA  F   +  TG+ PDQ +Y T+I   C  G   KA + L  M   S+ P  
Sbjct: 583 CTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNL 642

Query: 402 HIWNVIIDGYGRCGDLSNA-----------------------------------FSIRDL 426
             +  ++ G    G +  A                                     I +L
Sbjct: 643 ITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHEL 702

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M+  G+ +++  +N L+      G   +A  +  EML  GI PD  T+N LI   C   H
Sbjct: 703 MMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSH 762

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A  +Y +ML +G++P+I T+  L+ G  + G + EA+ V + ++ +GL  +++ + I
Sbjct: 763 LDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDI 822

Query: 547 LKKRYRRMKESDK 559
           L   Y   K+S+K
Sbjct: 823 LVTGY--AKKSNK 833



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 225/479 (46%), Gaps = 40/479 (8%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G I  A  +  +M +K  +P+V+T + ++N L K G L KA   +R+M +   +PN 
Sbjct: 408 CRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNV 467

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TY   I G+ +    + AL ++  M + G+  N    + LV+ L K G +  A     +
Sbjct: 468 VTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKD 527

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +   D+     D +  T LMD  FK G+   A  +  ++ +KN+  D V YNV IN  C 
Sbjct: 528 M---DERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCT 584

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G  S A ++  +M   G  PD  TYNT++   C++GK  +A      + +  + P+ I+
Sbjct: 585 LGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLIT 644

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKS-----------------------VVPEPH--- 402
           Y T++ GL +   +VK  +FLL+ +  +                       V+ E H   
Sbjct: 645 YTTLVVGL-LEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELM 703

Query: 403 ----------IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
                     ++N ++      G   NA  + D ML+ G++ +  TFNALIL   +   +
Sbjct: 704 MGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHL 763

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +AF++  +ML  G+ P++ T+N L+G   + G I  A  +  +M + G+ P+ +TY  L
Sbjct: 764 DNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDIL 823

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           + G+  + N  EA  ++ ++ + G       +  L   + +    ++A+++  +   R 
Sbjct: 824 VTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRG 882



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 220/510 (43%), Gaps = 67/510 (13%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C    +  AL +  +M  +G   DV+ +N LV      GD + A  V+  M   
Sbjct: 192 ALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKAD 251

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY A I  YC+   +D+A  L+  M  +G+ P+ VT + LV  LC+ G   +A
Sbjct: 252 GVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEA 311

Query: 243 VKFLGEV--------------LADDDGKA------------------TSDVITSTILMDS 270
                E+              L D   KA                    D++  T LMD 
Sbjct: 312 YALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDR 371

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K G   +A  +       NI  + V Y VL++  C  G+I  A     QM ++  +P+
Sbjct: 372 LGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPN 431

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII----------------- 373
           V+T+++++N L K+G L +A+ +   +  +G+AP+ ++Y T+I                 
Sbjct: 432 VVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYR 491

Query: 374 ------------------QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
                              GL  +G+I  A      M E+ ++ +   +  ++DG  + G
Sbjct: 492 DMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTG 551

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
           ++  AF +   ++   +S +   +N  I      G   +A S  KEM   G+ PD  TYN
Sbjct: 552 NMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYN 611

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            +I A C  G    AL+L  EM R  I P++ITYT L+ G    G +K+A+ +  ++ + 
Sbjct: 612 TMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASA 671

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           G A   +  + + +     +  D   +IH+
Sbjct: 672 GFAPTSLTHQRVLQACSGSRRPDVILEIHE 701



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 201/424 (47%), Gaps = 6/424 (1%)

Query: 150 VP-DVLTHNYLVNELCKIGDLEKADHVIREMSEMRP----SPNCATYNAFITGYCRVNEL 204
           VP D LT N ++   C +  L  A  ++R  S  +     + +  +YN F+         
Sbjct: 72  VPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHG 131

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
             A  + S M   G+  + VT +  +  LC+ GL+G+A   L E+L    G    DV+  
Sbjct: 132 RLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAA-LAEMLVRGRGIDGLDVVGW 190

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
             L+D Y K  D   ALA+   M  + +  D+V YN L+ GF  +GD  +A     +M  
Sbjct: 191 NALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKA 250

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G  P+V+TY  L+   CK   +DEA   Y  + ++GV PD ++   ++ GLC  G   +
Sbjct: 251 DGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSE 310

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A      M +  V P    +  +ID   +    S +  +   M+S GV  ++  + AL+ 
Sbjct: 311 AYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMD 370

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              + G I +A  + +    D I P+  TY +L+ A C  G+I  A Q+  +M  + + P
Sbjct: 371 RLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIP 430

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
           +++T++ +I G   RG + +A +   K++  G+A + + +  L   + + +  + A D++
Sbjct: 431 NVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVY 490

Query: 565 QKWL 568
           +  L
Sbjct: 491 RDML 494



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 199/431 (46%), Gaps = 5/431 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP--SPNCATYNAFITGYCR 200
           +M ++G   D +T +  +  LC+ G + +A  +   +   R     +   +NA I GYC+
Sbjct: 140 EMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDGYCK 199

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
           V ++  AL +   M   G+  + V +N LV      G    A++ +  + AD       +
Sbjct: 200 VQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADG---VEPN 256

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           V+T T L+  Y K     +A +L+  M +  +  D+V  + L++G C +G  S A+A F 
Sbjct: 257 VVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFR 316

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +M K G  P+ +TY TL++ L K  +  E+    G +   GV  D + Y  ++  L   G
Sbjct: 317 EMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEG 376

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            I +A++ L      ++ P    + V++D + R G++  A  +   M    V  NV TF+
Sbjct: 377 KIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFS 436

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           ++I    + G +  A    ++M   GI P+V TY  LI           AL +Y +ML  
Sbjct: 437 SIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHE 496

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G+  +      L+ G    GN++ AE +F  +   GL +DH+ +  L     +      A
Sbjct: 497 GVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAA 556

Query: 561 RDIHQKWLLRN 571
             + Q+ + +N
Sbjct: 557 FKVGQELMEKN 567



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 183/413 (44%), Gaps = 3/413 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D+  +  ++  L   G +  A  + +++++K   PD + +N  +N LC +G   +A   +
Sbjct: 536 DHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFL 595

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           +EM      P+ ATYN  I   CR  +  KAL L   M  N I+PN +T+  LV  L + 
Sbjct: 596 KEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEA 655

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G++  A KFL   +A      TS      +   S  +  D    L +   M    +  DI
Sbjct: 656 GVVKKA-KFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVI--LEIHELMMGAGLHADI 712

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             YN L++  C +G   +A     +ML RG  PD IT+N L+   CK   LD A   Y  
Sbjct: 713 TVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQ 772

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G++P+  ++ T++ GL   G I +A   L  M +  + P    +++++ GY +  +
Sbjct: 773 MLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSN 832

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
              A  +   M+S G      T+N+L+    + G +  A  L  EM   G+     TY++
Sbjct: 833 KVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDI 892

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           L+     L +      L  +M   G  P   T + + +     G   EA  + 
Sbjct: 893 LLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLL 945



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 43/343 (12%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           LK MR+TG     LE D   +  +I   C  GK   AL L ++M +    P+++T+  LV
Sbjct: 595 LKEMRNTG-----LEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLV 649

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
             L + G ++KA  ++ EM+    +P   T+   +         D  L +   M   G+ 
Sbjct: 650 VGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLH 709

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
            +   +N LVH LC  G+  +A                      T+++D           
Sbjct: 710 ADITVYNTLVHVLCCHGMARNA----------------------TVVLD----------- 736

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
                +M  + I  D + +N LI G C +  + +AFA + QML +G  P++ T+NTLL  
Sbjct: 737 -----EMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGG 791

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           L   G++ EA      + K G+ P+ ++Y  ++ G     + V+A      M+ K  +P+
Sbjct: 792 LESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPK 851

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
              +N ++  + + G ++ A  +   M   GV     T++ L+
Sbjct: 852 ASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILL 894



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 110/281 (39%), Gaps = 38/281 (13%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  ++  LC  G    A  +  +M+ +G  PD +T N L+   CK   L+ A 
Sbjct: 708 LHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAF 767

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  +M     SPN AT+N  + G      + +A  + S M   G+ PN +T++ILV   
Sbjct: 768 AIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILV--- 824

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
                                                Y K  +K +AL L+ +M  K   
Sbjct: 825 -----------------------------------TGYAKKSNKVEALRLYCEMVSKGFI 849

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
                YN L++ F   G ++ A   F +M +RG L    TY+ LLN   K     E    
Sbjct: 850 PKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRIL 909

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
              + + G  P + +  ++ +     G   +AR  L ++ +
Sbjct: 910 LKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFK 950


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 200/389 (51%), Gaps = 9/389 (2%)

Query: 149 TVPDVLTHNYLVNELCKIGD-LEKADHVIREMS-EMRPSPNCATYNAFITGYCRVNELDK 206
           +V D +++N ++  LC+ G  L+ A  ++R M+ E RP+    +Y   +   C      +
Sbjct: 74  SVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPT--AVSYTTLMRALCAERRTGQ 131

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A+ L   M  +G+RP+ VT+  L+  LC    +  AV+ L E+    +     +V+  + 
Sbjct: 132 AVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMC---ESGIEPNVVVYSC 188

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+  Y K G       ++ +M  + I+ D+V Y  LI+  C  G +  A     +M++RG
Sbjct: 189 LLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERG 248

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+V+TYN L+N +CK+G + EA      + + GVA D ++Y T+I GL    ++ +A 
Sbjct: 249 LEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAM 308

Query: 387 EFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
             L  M+    + EP++  +N +I G  + G +  AF +RD+M   G + N+ TFN LI 
Sbjct: 309 GLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIG 368

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              R   +  A  L  EM   G+ PD FTY++LI   C +  +  A  L  +M R GI P
Sbjct: 369 GLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEP 428

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +++ Y  L+   C +G M++A   F ++ 
Sbjct: 429 ELVHYIPLLAALCEQGMMEQARNFFDEMH 457



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 220/445 (49%), Gaps = 6/445 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++R LC   + G A+ L R M   G  PDV+T+  L+  LC   D++KA  ++REM 
Sbjct: 116 YTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMC 175

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN   Y+  + GYC+    +    +F  M+  GI P+ V +  L+ +LC++G + 
Sbjct: 176 ESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVK 235

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A + + +++   +     +V+T  +L++S  K G   +A++L N+M +K +  D V YN
Sbjct: 236 KATQVMDKMM---ERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYN 292

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFL--PDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
            LI G     ++  A     +M+    +  P+V+T+N++++ LCK G++ +A     +++
Sbjct: 293 TLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMA 352

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           + G A + +++  +I GL     + KA E +  M    + P+   ++++I+G+ +   + 
Sbjct: 353 ENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVD 412

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A S+   M   G+   +  +  L+ A    G +  A +   EM  +    DV  Y+ +I
Sbjct: 413 RAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKL-DVVAYSTMI 471

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
             +C L     A +    ML  G+ PD +TY+ LI      G++  AE V  ++   G  
Sbjct: 472 HGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFV 531

Query: 539 IDHIPFRILKKRYRRMKESDKARDI 563
            D   F  L K Y    +++K  ++
Sbjct: 532 PDVAVFDSLIKGYGAKGDTEKVLEL 556



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 209/428 (48%), Gaps = 10/428 (2%)

Query: 124 VIRDLC-LGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           V+  LC  GG +  AL+L R M  + T P  +++  L+  LC      +A  ++R+M   
Sbjct: 84  VLAALCRQGGCLDAALFLLRVMAHE-TRPTAVSYTTLMRALCAERRTGQAVGLLRDMQAS 142

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY   I G C   ++DKA+ L   M  +GI PN V ++ L+   CK G     
Sbjct: 143 GVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRW--- 199

Query: 243 VKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
            + + +V  +  G+    DV+  T L+DS  + G   +A  + + M ++ ++ ++V YNV
Sbjct: 200 -ECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNV 258

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL--SK 359
           LIN  C  G +  A +    ML++G   D +TYNTL+  L    ++DEA      +   +
Sbjct: 259 LINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGE 318

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
           T V P+ +++ ++I GLC  G + +A +    M E         +N++I G  R   +  
Sbjct: 319 TMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKK 378

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  + D M S G+  + FT++ LI    +   +  A SL  +M  DGI P++  Y  L+ 
Sbjct: 379 AMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLA 438

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           A C  G +  A   +DEM  +    D++ Y+ +I G C   + K AEE    +   GL  
Sbjct: 439 ALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIP 497

Query: 540 DHIPFRIL 547
           D + + +L
Sbjct: 498 DSVTYSML 505



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 186/359 (51%), Gaps = 6/359 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  +I  LC  GK+  A  +  KM+++G  P+V+T+N L+N +CK G +++A 
Sbjct: 214 IEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAM 273

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM--ANNGIRPNRVTHNILVH 231
            +   M E   + +  TYN  ITG   V E+D+A+ L   M      + PN VT N ++H
Sbjct: 274 SLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIH 333

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            LCK G +  A + + +++A++      +++T  +L+    +     +A+ L ++M    
Sbjct: 334 GLCKTGRMRQAFQ-VRDMMAENG--CACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSG 390

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           ++ D   Y++LINGFC    +  A +   +M + G  P+++ Y  LL  LC+QG +++A 
Sbjct: 391 LEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQAR 450

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
           +F+  + K     D ++Y T+I G C   D   A EFL  ML++ ++P+   ++++I+ +
Sbjct: 451 NFFDEMHKN-CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMF 509

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
              GDL  A  +   M + G   +V  F++LI      G       L +EM    I  D
Sbjct: 510 ANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALD 568



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 189/381 (49%), Gaps = 8/381 (2%)

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
           A  +A +    R+  L ++  L S++ +  +R + V++N ++ ALC++G   DA  FL  
Sbjct: 47  AEASARLNRLLRLVPLPESPALLSSLPS--VR-DAVSYNTVLAALCRQGGCLDAALFLLR 103

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           V+A +        ++ T LM +        QA+ L  DM    ++ D+V Y  LI G C 
Sbjct: 104 VMAHE---TRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCD 160

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
             D+  A     +M + G  P+V+ Y+ LL   CK G+ +  S  +  +S  G+ PD + 
Sbjct: 161 AADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVM 220

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I  LC  G + KA + +  M+E+ + P    +NV+I+   + G +  A S+R+ ML
Sbjct: 221 YTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNML 280

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG--IFPDVFTYNLLIGASCNLGH 486
             GV+ +  T+N LI   +    + +A  L +EM+     + P+V T+N +I   C  G 
Sbjct: 281 EKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGR 340

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A Q+ D M   G   +++T+  LI G      +K+A E+  ++ + GL  D   + I
Sbjct: 341 MRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSI 400

Query: 547 LKKRYRRMKESDKARDIHQKW 567
           L   + +M + D+A  +  K 
Sbjct: 401 LINGFCKMWQVDRAESLLSKM 421



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 139/273 (50%), Gaps = 6/273 (2%)

Query: 137 ALWLRRKMIQKGTV--PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
           A+ L  +MI   T+  P+V+T N +++ LCK G + +A  V   M+E   + N  T+N  
Sbjct: 307 AMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLL 366

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           I G  RV+++ KA+ L   MA++G+ P+  T++IL++  CK   +  A   L ++  D  
Sbjct: 367 IGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDG- 425

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
                +++    L+ +  + G   QA   +++M  KN + D+VAY+ +I+G C   D  S
Sbjct: 426 --IEPELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKS 482

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A  +   ML  G +PD +TY+ L+N     G L  A      ++ +G  PD   + ++I+
Sbjct: 483 AEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIK 542

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           G    GD  K  E +  M  K +  +  I + I
Sbjct: 543 GYGAKGDTEKVLELIREMTAKDIALDSKIISTI 575



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 114/239 (47%)

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           D ++YNT+L  LC+QG   +A+ F   +      P  +SY T+++ LC      +A   L
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M    V P+   +  +I G     D+  A  +   M   G+  NV  ++ L+    + 
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G       + +EM   GI PDV  Y  LI + C  G +  A Q+ D+M+ RG+ P+++TY
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             LI   C  G++KEA  +   +   G+A+D + +  L      + E D+A  + ++ +
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 33/251 (13%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +VI  LC  G++  A  +R  M + G   +++T N L+  L ++  ++KA  ++ EM+  
Sbjct: 330 SVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASS 389

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY+  I G+C++ ++D+A  L S M  +GI P  V +  L+ ALC++G++  A
Sbjct: 390 GLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQA 449

Query: 243 VKFLGEV--------------------LAD------------DDGKATSDVITSTILMDS 270
             F  E+                    L D            D+G    D +T ++L++ 
Sbjct: 450 RNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEG-LIPDSVTYSMLINM 508

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           +  +GD   A  +   M       D+  ++ LI G+   GD         +M  +    D
Sbjct: 509 FANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALD 568

Query: 331 VITYNTLLNCL 341
               +T+  CL
Sbjct: 569 SKIISTIYTCL 579



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 101/257 (39%), Gaps = 42/257 (16%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A  +   +L+RG        N LL       +L        +LS      D +SY T++ 
Sbjct: 34  AAPFLAVLLRRGRAEASARLNRLL-------RLVPLPESPALLSSLPSVRDAVSYNTVLA 86

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
            LC  G  + A  FLL ++     P                    A S   LM +     
Sbjct: 87  ALCRQGGCLDAALFLLRVMAHETRP-------------------TAVSYTTLMRA----- 122

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
                   + AE R G    A  L ++M   G+ PDV TY  LI   C+   +  A++L 
Sbjct: 123 --------LCAERRTG---QAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELL 171

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
            EM   GI P+++ Y+ L++G+C  G  +   +VF ++   G+  D + +  L     R 
Sbjct: 172 REMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCRE 231

Query: 555 KESDKARDIHQKWLLRN 571
            +  KA  +  K + R 
Sbjct: 232 GKVKKATQVMDKMMERG 248


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 195/423 (46%), Gaps = 42/423 (9%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+  T+   + G CR N+L+KA  L   M   G  P+   +N L+    K    G A K
Sbjct: 7   QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 66

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
           FL E++ +        V+T T ++D   K G    A+ L ++M  K    +I  YNV++ 
Sbjct: 67  FLAEMVKN---HCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVE 123

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C    +  A     +M  RG+ PDV+TYN+ +  LCK  ++DEA  F   L++  V P
Sbjct: 124 GLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTP 180

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D +SY T+I GLC  GD+  A   L  M  +   P+   ++ +IDG+ + G++  A  + 
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           D ML  G   N+  +N+L+ A  R G I  A  +  EM   G  PDV +YN  I   C  
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 300

Query: 485 GHIHLALQLYDEMLRRGITP-----------------------------------DIITY 509
             +  A  ++D M+ RG TP                                   DI+ Y
Sbjct: 301 ERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLY 360

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF-RILKKRYRRMKESDKARDIHQKWL 568
           T L+ G C  G   EA  +F+K+    +    + F  ++   + + ++ DKA  IH++ L
Sbjct: 361 TVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQML 420

Query: 569 LRN 571
            RN
Sbjct: 421 ERN 423



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 214/433 (49%), Gaps = 8/433 (1%)

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
           G A     +M++   +P V+T+  +V+ LCK G  + A  ++ EM +   SPN  TYN  
Sbjct: 62  GQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVI 121

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           + G C   +LD+A  +   MA  G  P+ VT+N  +  LCK   + +A KFL  +     
Sbjct: 122 VEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM----- 176

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
              T DV++ T +++   K+GD   A  + + M  +    D+V Y+ LI+GFC  G++  
Sbjct: 177 -PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVER 235

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A      MLK G  P+++ YN+LL  L + G + +A      + + G  PD +SY   I 
Sbjct: 236 AMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACID 295

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           GLC    + KA+     M+E+   P    ++++++   +  +L +A ++ +         
Sbjct: 296 GLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIV 355

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF-PDVFTYNLLIGASCNLGHIHLALQL 493
           ++  +  L+    +GG   +A +L  ++L + I  PDVF YN+++ + C    I  ALQ+
Sbjct: 356 DILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQI 415

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           + +ML R    +++T+  L+ G C    + +AE +   +   G   D + +  L     +
Sbjct: 416 HKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCK 474

Query: 554 MKESDKARDIHQK 566
             +S  A ++ ++
Sbjct: 475 CGKSAAALELFEE 487



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 206/442 (46%), Gaps = 44/442 (9%)

Query: 92  LILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           L  +  LD  K M +   VR     D   + + I+ LC   ++  A   R+ + +    P
Sbjct: 125 LCEERKLDEAKKMLEEMAVRGYF-PDVVTYNSFIKGLCKCDRVDEA---RKFLARMPVTP 180

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           DV+++  ++N LCK GDL+ A  ++ +M+    +P+  TY++ I G+C+  E+++A+ L 
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
            +M   G RPN V +N L+ AL + G +G A   L E                       
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE----------------------- 277

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
                          M ++    D+V+YN  I+G C    +  A A F +M++RG  P+ 
Sbjct: 278 ---------------MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 322

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            +Y+ L+  LCK+ +LD+A        +     D + Y  ++ GLC  G   +A      
Sbjct: 323 SSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSK 382

Query: 392 ML-EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
           +L EK   P+   +NV++D + +   +  A  I   ML      NV T+N L+       
Sbjct: 383 VLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERN-CCNVVTWNILVHGLCVDD 441

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + DA ++   M+ +G  PD  TY  L+ A C  G    AL+L++E ++ G  PD++TY+
Sbjct: 442 RLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYS 501

Query: 511 ELIKGHCARGNMKEAEEVFAKI 532
            LI G       +EA  +F K+
Sbjct: 502 ALITGLVHENMAEEAYLLFTKL 523



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 200/436 (45%), Gaps = 45/436 (10%)

Query: 97  NLDRLKTMRDTGPVR-CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           +LD    M D    R CT   D   + ++I   C GG++  A+ L   M++ G  P+++ 
Sbjct: 197 DLDSASRMLDQMTNRGCT--PDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 254

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +N L+  L ++G + KA+ ++ EM     +P+  +YNA I G C+   + KA  +F  M 
Sbjct: 255 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 314

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE--------------VLAD--------- 252
             G  PN  ++++LV  LCKK  L DA+  + +              VL D         
Sbjct: 315 ERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFD 374

Query: 253 ----------DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                     D+     DV    +++DS+ K     +AL +   M ++N   ++V +N+L
Sbjct: 375 EACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNIL 433

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G C++  +S A      M+  GF+PD +TY TL++ +CK GK   A   +    K G 
Sbjct: 434 VHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGC 493

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y  +I GL +H ++ +    L + L+ +      +WN +I GY   G       
Sbjct: 494 VPDVVTYSALITGL-VHENMAEEAYLLFTKLDVA------LWNAMILGYAENGSGDLGLK 546

Query: 423 IRDLMLSFGVSSNVFTFNALILAE-TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           +   ++   V  N  TF   I  +  +  S+  A  L    +  G FPD+F  N LI   
Sbjct: 547 LFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVF 606

Query: 482 CNLGHIHLALQLYDEM 497
              G +  A +++  M
Sbjct: 607 AKCGDLEEARRIFYSM 622


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 240/509 (47%), Gaps = 42/509 (8%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E L     MRD G      + D      ++R  CL  ++G AL L ++ ++ G VP  
Sbjct: 278 MEEALRVNDEMRDAGK-----KMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTK 332

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMS--------------------------------E 181
           + +  L+    ++G  +KA  + R+M+                                E
Sbjct: 333 VMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEE 392

Query: 182 MRPS--PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
           M  S  P+  TYN  I  +C+ ++L +AL+LF  M   G++P+  T+N L+   CKKG +
Sbjct: 393 MADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCM 452

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +AVK   E+  +       +V+T   LM  Y    D   A AL ++M Q  +  +   Y
Sbjct: 453 DEAVKLYSEMPMEG---FKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTY 509

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           NVLING C+   +          +  GF+P ++TYN+++N   K G +  A   Y  + +
Sbjct: 510 NVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMRE 569

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ P+ I+Y + I G C  G    A + L  +  + + P+   +N +I+G+ + G++S+
Sbjct: 570 KGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSH 629

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +  ++L  G++ N   +N+LI        + +     + M+  GI  D  TY  LI 
Sbjct: 630 ALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLID 689

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                G++  AL+LY EM+ +G  PD  T+T L  G C  G++  A+++  +++ L +  
Sbjct: 690 GFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRP 749

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +   + +L   Y R  +  +A  +H + L
Sbjct: 750 NVFIYNMLINGYLRDCKLQEAFRLHDEML 778



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 187/385 (48%), Gaps = 3/385 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C   K+  AL L  +M + G  P + T+N L+   CK G +++A  +  EM      PN 
Sbjct: 412 CQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNV 471

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TY   + GY    + D A  L   M  NG+  N  T+N+L++ +C    + +    L  
Sbjct: 472 VTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKS 531

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
            +++        ++T   +++ + K G    A  ++  M +K +  +I+ Y   I+G+C 
Sbjct: 532 FMSE---GFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCR 588

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G    A      + +RG  PD++ YN L+N  C++G +  A     +L K G+AP+ + 
Sbjct: 589 TGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVV 648

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y ++I G      + +  +F  SM++  +V +   +  +IDG+ + G+++ A  +   M+
Sbjct: 649 YNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMM 708

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           + G   + FTF AL     R G I  A  L +EM    + P+VF YN+LI        + 
Sbjct: 709 AKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQ 768

Query: 489 LALQLYDEMLRRGITPDIITYTELI 513
            A +L+DEML  GI PD  TY  L+
Sbjct: 769 EAFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 190/385 (49%), Gaps = 8/385 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L+E L+    M+  G V+ ++ T    + +++   C  G +  A+ L  +M  +G  P+V
Sbjct: 417 LREALNLFDRMKKAG-VKPSINT----YNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNV 471

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+  L+       D + A  ++ EM +   S N  TYN  I G C V+ + +   +  +
Sbjct: 472 VTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKS 531

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
             + G  P  +T+N +++   K G++G A     ++    +     ++IT T  +D Y +
Sbjct: 532 FMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQM---REKGLPPNIITYTSFIDGYCR 588

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G    AL + ND+ ++ +Q DIVAYN LINGFC  G++S A      +LK G  P+ + 
Sbjct: 589 TGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVV 648

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN+L+        + E S FY  + K G+  D  +Y T+I G    G++  A E    M+
Sbjct: 649 YNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMM 708

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            K  +P+   +  +  G  R GD+  A  + + M    V  NVF +N LI    R   + 
Sbjct: 709 AKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQ 768

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLI 478
           +AF L  EML  GI PD  TY++L+
Sbjct: 769 EAFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 212/451 (47%), Gaps = 11/451 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D R +   I  LC  G  G AL + R+M + G      T+  +V+ L K G +E+A 
Sbjct: 223 IDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEAL 282

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V  EM +     +       + GYC   E+  AL+LF     +GI P +V + +L+   
Sbjct: 283 RVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGC 342

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSD--VITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            + G+   A +   ++       +T +  ++   +L D  +K+     A+ L+ +M    
Sbjct: 343 DQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKD-----AVCLFEEMADSG 397

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           +  D+  YN LI+  C    +  A   F +M K G  P + TYN+LL   CK+G +DEA 
Sbjct: 398 LP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAV 456

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
             Y  +   G  P+ ++Y T+++G     D   A   L  M +  V    + +NV+I+G 
Sbjct: 457 KLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGI 516

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
                +     +    +S G    + T+N++I    + G +  AF++ ++M   G+ P++
Sbjct: 517 CMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNI 576

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TY   I   C  G   +AL++ +++ RRG+ PDI+ Y  LI G C  GNM  A ++   
Sbjct: 577 ITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVI 636

Query: 532 IQTLGLAIDHIPFRILKKRYRR---MKESDK 559
           +   GLA + + +  L   Y+    MKE  K
Sbjct: 637 LLKDGLAPNTVVYNSLITGYKNLNMMKEVSK 667



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 156/375 (41%), Gaps = 39/375 (10%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  +    +    R +    AL LF  M   G R +    + L+ A  K+G+  DAV+ 
Sbjct: 155 PDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVR- 213

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
                                                L+++M    I  D   Y + I  
Sbjct: 214 -------------------------------------LFDEMPGAEIDPDQRVYALAITA 236

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C  GD   A     +M + GF     TY T+++ L K G+++EA      +   G   D
Sbjct: 237 LCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMD 296

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            I   T+++G C+  ++  A       L+  +VP   ++ V+I G  + G    A+ +  
Sbjct: 297 VIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCR 356

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   G+  + F  + ++          DA  L +EM   G+ PDVFTYN LI   C   
Sbjct: 357 QMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAH 415

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  AL L+D M + G+ P I TY  L+ G+C +G M EA ++++++   G   + + + 
Sbjct: 416 KLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYI 475

Query: 546 ILKKRYRRMKESDKA 560
            L + Y   K+ D A
Sbjct: 476 TLMRGYIAKKDFDNA 490



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 108/288 (37%), Gaps = 34/288 (11%)

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           +  M  + +  DI +   L+           A A F +M  RG+  D   ++ L++   K
Sbjct: 145 YAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLK 204

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
           +G  ++A   +  +    + PDQ  Y   I  LC  GD  +A   L  M E         
Sbjct: 205 EGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFT 264

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +  ++D   + G +  A  + D M   G   +V     L+        + +A +L KE L
Sbjct: 265 YRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETL 324

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI--------------------- 502
            DGI P    Y +LI     +G    A +L  +M  +G+                     
Sbjct: 325 KDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWK 384

Query: 503 -------------TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
                         PD+ TY  LI  HC    ++EA  +F +++  G+
Sbjct: 385 DAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGV 432



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 76/177 (42%)

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M+ + VVP+      ++    R     +A ++   M   G   + + F+AL+ A  + G 
Sbjct: 148 MVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGM 207

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
             DA  L  EM    I PD   Y L I A C LG    AL++  EM   G      TY  
Sbjct: 208 HEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRT 267

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           ++      G M+EA  V  +++  G  +D I    L + Y   +E   A ++ ++ L
Sbjct: 268 MVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETL 324


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 219/449 (48%), Gaps = 10/449 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++   C  GK+  A  + +KM ++   P+V+T + ++N   K G L KA  V+REM 
Sbjct: 464 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 523

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN   Y   I GY +  E D A      M +  +  + V  +IL++ L + G + 
Sbjct: 524 QRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMD 583

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A   + ++ +        D++    L+D YFK G++  AL++  +M +KNI+ D+VAYN
Sbjct: 584 EARSLIIDMYSKG---IDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYN 640

Query: 301 VLINGFCLNGDISSAFAYFC-QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
            LI G    G       Y C +M++ G  PD ITYNT++N  C +GK ++A      +  
Sbjct: 641 ALIKGLLRLGKYDPR--YVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKS 698

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ P+ ++Y  +I GLC  G + KA   L  ML    VP P     ++  Y R      
Sbjct: 699 YGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADK 758

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
              I + +++ G+  ++  +N LI    R G    A  +  EM+  GI  D+ TYN LI 
Sbjct: 759 ILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIR 818

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG----NMKEAEEVFAKIQTL 535
             C   H+  AL+ Y +M   GI P+I TY  L+ G    G     M+E E++ +++   
Sbjct: 819 GYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNER 878

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIH 564
           GL  +   + IL   Y R+    K   +H
Sbjct: 879 GLVPNAATYDILVSGYGRVGNRKKTIILH 907



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 218/450 (48%), Gaps = 24/450 (5%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +     +   M+  G VPDV + N LV+ LCK+GDL+ A   +R    +    +  TY
Sbjct: 108 GLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVV--DIDNVTY 165

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I G+C+   +D+   L S M   G+  + +T NILV   C+ GL+  A   +  ++ 
Sbjct: 166 NTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLV- 224

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             DG  T DVI    L+D Y + G   QA  L  + ++ +++ DIV YN L+  FC  GD
Sbjct: 225 --DGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGD 282

Query: 312 ISSAFAYFCQMLK-------------------RGFLPDVITYNTLLNCLCKQGKLDEASH 352
           ++ A + F ++L                    +   P ++TY TL+   CK   ++E+  
Sbjct: 283 LTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHS 342

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            Y  +   G+ PD ++  +I+ G C HG + +A      M E  + P    +  II+   
Sbjct: 343 LYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLF 402

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           + G +  AF+++  M+  G+S ++ T   ++    + G   +A  + + +L   + P+  
Sbjct: 403 KSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCV 462

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY+ L+   C LG + LA  +  +M +  + P++IT++ +I G+  +G + +A +V  ++
Sbjct: 463 TYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREM 522

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARD 562
               +  + I + IL   Y +  E D A D
Sbjct: 523 VQRNVMPNTIVYAILIDGYFKAGEQDVADD 552



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 205/427 (48%), Gaps = 4/427 (0%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L +KMI  G +PDV+T + ++   C+ G L +A  + REM EM   PN  +Y   I    
Sbjct: 343 LYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLF 402

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +   + +A +L S M   GI  + VT   ++  L K G   +A +    +L  +      
Sbjct: 403 KSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLN---LAP 459

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           + +T + L+D Y K G    A  +   M ++++  +++ ++ +ING+   G +S A    
Sbjct: 460 NCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVL 519

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M++R  +P+ I Y  L++   K G+ D A  F   +    +    + +  ++  L   
Sbjct: 520 REMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRV 579

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G + +AR  ++ M  K + P+   +  +IDGY + G+   A SI   M    +  +V  +
Sbjct: 580 GRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAY 639

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           NALI    R G  +D   +   M+  G+ PD  TYN +I   C  G    AL + +EM  
Sbjct: 640 NALIKGLLRLGK-YDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKS 698

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            GI P+ +TY  LI G C  G +++AE    ++  +      I  + L K Y R +++DK
Sbjct: 699 YGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADK 758

Query: 560 ARDIHQK 566
              IH+K
Sbjct: 759 ILQIHEK 765



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 215/460 (46%), Gaps = 23/460 (5%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM--- 179
            +I   C  G +  A  L     +     D++T+N L+   CK GDL +A+ +  E+   
Sbjct: 237 TLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGF 296

Query: 180 ---------------SEMRP-SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
                          +E++   P   TY   I  YC+   ++++  L+  M  NGI P+ 
Sbjct: 297 WKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDV 356

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           VT + +++  C+ G L +A     E+   + G   + V  +TI+ +S FK+G   +A  L
Sbjct: 357 VTCSSILYGFCRHGKLTEAAVLFREMY--EMGLDPNHVSYATII-NSLFKSGRVMEAFNL 413

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            + M  + I  DIV    +++G    G    A   F  +LK    P+ +TY+ LL+  CK
Sbjct: 414 QSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCK 473

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            GK++ A      + K  V P+ I++ +II G    G + KA + L  M++++V+P   +
Sbjct: 474 LGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIV 533

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           + ++IDGY + G+   A      M S  +  +   F+ L+    R G + +A SL  +M 
Sbjct: 534 YAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMY 593

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             GI PD+  Y  LI      G+   AL +  EM  + I  D++ Y  LIKG    G   
Sbjct: 594 SKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY- 652

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           +   V +++  LGLA D I +  +   Y    +++ A DI
Sbjct: 653 DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDI 692



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 175/354 (49%), Gaps = 8/354 (2%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL + ++M +K    DV+ +N L+  L ++G  +   +V   M E+  +P+C TYN  I 
Sbjct: 620 ALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDCITYNTIIN 678

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            YC   + + AL + + M + GI PN VT+NIL+  LCK G +  A   L E+L  +   
Sbjct: 679 TYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVME--- 735

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
                IT   L+ +Y ++    + L +   +    ++  +  YN LI  FC  G    A 
Sbjct: 736 FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAK 795

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M+KRG   D++TYN L+   C    +++A   Y  +   G+AP+  +Y T++ GL
Sbjct: 796 VVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGL 855

Query: 377 CIHG----DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
              G     + +  + +  M E+ +VP    +++++ GYGR G+      +   M++ G 
Sbjct: 856 SNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGF 915

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
              + T+N LI    + G + +A  L  ++L  G  P+ FTY++L     NL +
Sbjct: 916 VPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSY 969



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 215/487 (44%), Gaps = 51/487 (10%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            VI   C  G +     L  +M+++G   D +T N LV   C+IG ++ A+ V+  + + 
Sbjct: 167 TVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDG 226

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             + +    N  I GYC    + +A  L      + ++ + VT+N L+ A CK G L  A
Sbjct: 227 GVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRA 286

Query: 243 VKFLGEVLA---DDDGKATSDVITS-------------TILMDSYFKNGDKFQALALWND 286
                E+L    D+D    +DV+T              T L+ +Y K     ++ +L+  
Sbjct: 287 ESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKK 346

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M    I  D+V  + ++ GFC +G ++ A   F +M + G  P+ ++Y T++N L K G+
Sbjct: 347 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 406

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           + EA +    +   G++ D ++  T++ GL   G   +A E   ++L+ ++ P    ++ 
Sbjct: 407 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 466

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           ++DGY + G +  A  +   M    V  NV TF+++I    + G +  A  + +EM+   
Sbjct: 467 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 526

Query: 467 IFPDVFTYNLLIGAS------------CN-----------------------LGHIHLAL 491
           + P+   Y +LI               C                        +G +  A 
Sbjct: 527 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 586

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            L  +M  +GI PDI+ Y  LI G+   GN   A  +  +++   +  D + +  L K  
Sbjct: 587 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGL 646

Query: 552 RRMKESD 558
            R+ + D
Sbjct: 647 LRLGKYD 653



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 197/443 (44%), Gaps = 32/443 (7%)

Query: 150 VPDVLTHNYLVNELCKIGDL-------EKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +P   TH Y V+  C +  L         A      M  +   P    +N  +  +    
Sbjct: 50  IPPTKTHLY-VSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASG 108

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            + +   ++S M   G+ P+  + N+LVH+LCK G L  A+ +L      ++     D +
Sbjct: 109 LVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYL-----RNNDVVDIDNV 163

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   ++  + + G   Q   L ++M ++ +  D +  N+L+ G+C  G +  A      +
Sbjct: 164 TYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNL 223

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           +  G   DVI  NTL++  C+ G + +A+       ++ V  D ++Y T+++  C  GD+
Sbjct: 224 VDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDL 283

Query: 383 VKAREFLLSMLE-------------------KSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            +A      +L                    K++ P    +  +I  Y +   +  + S+
Sbjct: 284 TRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSL 343

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+  G+  +V T ++++    R G + +A  L +EM   G+ P+  +Y  +I +   
Sbjct: 344 YKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFK 403

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A  L  +M+ RGI+ DI+T T ++ G    G  KEAEEVF  I  L LA + + 
Sbjct: 404 SGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVT 463

Query: 544 FRILKKRYRRMKESDKARDIHQK 566
           +  L   Y ++ + + A  + QK
Sbjct: 464 YSALLDGYCKLGKMELAELVLQK 486



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 140/324 (43%), Gaps = 42/324 (12%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C+ GK   AL +  +M   G +P+ +T+N L+  LCK G +EKA+  + EM  M
Sbjct: 675 TIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVM 734

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P   T+   +  Y R  + DK L +   +  +G+  +   +N L+   C+ G+    
Sbjct: 735 EFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTR-- 792

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                               +A  + ++M ++ I  D+V YN L
Sbjct: 793 ------------------------------------KAKVVLDEMVKRGISADLVTYNAL 816

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG----KLDEASHFYGVLS 358
           I G+C    +  A   + QM   G  P++ TYNTLL  L   G     ++E       ++
Sbjct: 817 IRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMN 876

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           + G+ P+  +Y  ++ G    G+  K     + M+ K  VP    +NV+I  Y + G + 
Sbjct: 877 ERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMI 936

Query: 419 NAFSIRDLMLSFGVSSNVFTFNAL 442
            A  + + +L+ G   N FT++ L
Sbjct: 937 EARELLNDLLTKGRIPNSFTYDIL 960


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 220/438 (50%), Gaps = 3/438 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  +C  G + TA  L  +M + G  PD++T+N L++   KIG L+++  +  EM  M 
Sbjct: 138 MIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMG 197

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYNA I  +C+   + +A   F  M +  ++PN ++++ L+ ALCK+G++  A+
Sbjct: 198 CEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAI 257

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           KF  ++          +  T + L+D+  K G+  +A  L ++M Q+++  +IV Y  L+
Sbjct: 258 KFFVDMTRVG---LLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLL 314

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G ++ A   F  M K G  P++  Y  L++   K   +D+A   +  + +  + 
Sbjct: 315 DGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIK 374

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD + + TI+ GLC    + + +  +  M E  +   P I+  ++D Y + G+ + A ++
Sbjct: 375 PDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINL 434

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   G    V TF ALI    + G + +A      M    + P+V  Y  LI   C 
Sbjct: 435 LEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCK 494

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              I  A +L+DEM  + + PD I YT +I G+   GN +EA  +  K+  +G+ +D   
Sbjct: 495 NNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYA 554

Query: 544 FRILKKRYRRMKESDKAR 561
           +  L     +  +  +AR
Sbjct: 555 YTSLVWGLSQCGQVQQAR 572



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 195/414 (47%), Gaps = 7/414 (1%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           G  +   LW  R +     VP     + L + L ++G LE A      M++ R  P   +
Sbjct: 44  GSDVFEILWTTRNV----CVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARS 99

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
            NAF+    +  E D +   F  M   GI P   T+NI++  +CK+G +  A     ++ 
Sbjct: 100 CNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQM- 158

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                  T D++T   L+D Y K G   +++ L+ +M     + D++ YN LIN FC   
Sbjct: 159 --KKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFK 216

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  AF +F +M  +   P+VI+Y+TL++ LCK+G +  A  F+  +++ G+ P++ +Y 
Sbjct: 217 GMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYS 276

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           ++I   C  G++ +A      ML++ V      +  ++DG    G ++ A  +   M   
Sbjct: 277 SLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKA 336

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV+ N+  + ALI    +  S+  A  L  EM    I PD+  +  ++   C+   +   
Sbjct: 337 GVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEEC 396

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
             +  EM   GI  + + YT L+  +   GN  EA  +  +++ LG  +  + F
Sbjct: 397 KIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTF 450



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 137/292 (46%), Gaps = 35/292 (11%)

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G + +A   F +M K   LP   + N  L+ L K G+ D +  F+  +   G+AP   +Y
Sbjct: 76  GMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTY 135

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             +I  +C  GD++ AR     M +  + P+   +N +IDGYG+ G L  +  + + M  
Sbjct: 136 NIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKF 195

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEM--------------LLD---------- 465
            G   +V T+NALI +  +   +  AF   +EM              L+D          
Sbjct: 196 MGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQM 255

Query: 466 -----------GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
                      G+ P+ FTY+ LI A+C  G++  A  L DEML+  +  +I+TYT L+ 
Sbjct: 256 AIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLD 315

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           G C  G M EAEE+F  +   G+  +   +  L   + +++  DKA ++  +
Sbjct: 316 GLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNE 367



 Score = 45.4 bits (106), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 30/137 (21%), Positives = 64/137 (46%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ +   + A+I  LC    IG A  L  +M  K  +PD + +  +++   K G+ ++A 
Sbjct: 478 LQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEAL 537

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           ++  +M EM    +   Y + + G  +  ++ +A    + M   GI P+      L+   
Sbjct: 538 NMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKH 597

Query: 234 CKKGLLGDAVKFLGEVL 250
            + G + +A++   E++
Sbjct: 598 YELGNIDEAIELQNELV 614


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 209/462 (45%), Gaps = 39/462 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  V+  L   G++  AL   R ++++G   D+++ N ++  L  +  +E A  ++  + 
Sbjct: 112 HGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKILKGL-SVDQIEVASRMLSLVL 170

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +  P+PN  T+   I G+C+  E+D+A  LF  M   GI P+ + ++ L+    K G+LG
Sbjct: 171 DCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLG 230

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
              K   + L         DV+  +  +D Y K G    A  ++  M  + I  ++V Y 
Sbjct: 231 MGHKLFSQALHKG---VKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYT 287

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI G C +G I  AF  +CQ+LKRG  P V+TY++L++  CK G L      Y  + K 
Sbjct: 288 ILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKM 347

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  PD + Y  ++ GLC  G ++ A  F +  L +S+ P   ++N +IDG+ R      A
Sbjct: 348 GYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEA 407

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +  LM  +G+  +V T   L+      G + +   L   M   G+ PD   +  L+ A
Sbjct: 408 LKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDA 467

Query: 481 SCNLGHIHLALQLYDEMLRRGIT-----------------------------------PD 505
            C      + LQL+D M R  I                                    PD
Sbjct: 468 FCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPD 527

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           I+TY  +I G+C+   + EA  +F  ++      + +   IL
Sbjct: 528 IVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTIL 569



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 186/403 (46%), Gaps = 3/403 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G++  A  L + M Q+G  PD++ ++ L++   K G L     +  +    
Sbjct: 183 TLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 242

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +   +++ I  Y +   L  A  ++  M   GI PN VT+ IL+  LC+ G + +A
Sbjct: 243 GVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 302

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                ++L          V+T + L+D + K G+     AL+ DM +     D+V Y VL
Sbjct: 303 FGIYCQILKRG---LEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVL 359

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G C  G +  A  +  + L +   P+V+ +N+L++  C+  + DEA   + ++   G+
Sbjct: 360 VDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGI 419

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  +  T+++   + G + +       M +  + P+   +  ++D + +    +    
Sbjct: 420 KPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQ 479

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + DLM    + +++   N +I    +G S+ +A      +L   + PD+ TYN +I   C
Sbjct: 480 LFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYC 539

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           +L  +  A ++++ +      P+ +T T LI   C   +M  A
Sbjct: 540 SLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGA 582



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 141/268 (52%), Gaps = 6/268 (2%)

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLN-----GDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           +D F K  +   V + V  +GF L+     G+++ A  +   +++RGF  D+++ N +L 
Sbjct: 93  SDSFDKLCRGGTVPFGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKILK 152

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            L    +++ AS    ++   G AP+ +++ T+I G C  G++ +A E    M ++ + P
Sbjct: 153 GLSVD-QIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAP 211

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   ++ +IDGY + G L     +    L  GV  +V  F++ I    + G +  AF + 
Sbjct: 212 DLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVY 271

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           K ML  GI P+V TY +LI   C  G I+ A  +Y ++L+RG+ P ++TY+ LI G C  
Sbjct: 272 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKY 331

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           GN++    ++  +  +G   D + + +L
Sbjct: 332 GNLRSGFALYEDMIKMGYPPDVVIYGVL 359



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/424 (22%), Positives = 185/424 (43%), Gaps = 23/424 (5%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G + TA  + ++M+ +G  P+V+T+  L+  LC+ G + +A  +  ++ +    P+  TY
Sbjct: 262 GYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTY 321

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           ++ I G+C+   L     L+  M   G  P+ V + +LV  LCK+GL+  A++F  + L 
Sbjct: 322 SSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLG 381

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   +V+    L+D + +     +AL ++  M    I+ D+     L+    + G 
Sbjct: 382 QS---IRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGR 438

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +      F +M K G  PD + + TL++  CK  K       + ++ +  +  D      
Sbjct: 439 LKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNV 498

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I  L     + +A +F  ++LE  + P+   +N +I GY     L  A  I +++    
Sbjct: 499 VINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTP 558

Query: 432 VSSNVFTFNALILAETRGGSIFDAF------SLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
              N  T   LI    +   +  A        +   +++DG+              C  G
Sbjct: 559 FGPNAVTLTILIHTLCKNSDMDGALRIISPSIISYSIIIDGL--------------CKRG 604

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  A  ++ + +   I PD++ Y  LI+G C  G + EA  ++  +   G+  D +  R
Sbjct: 605 RVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPDDLLQR 664

Query: 546 ILKK 549
            L +
Sbjct: 665 ALSE 668



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 163/357 (45%), Gaps = 11/357 (3%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE     + ++I   C  G + +   L   MI+ G  PDV+ +  LV+ LCK G +  A 
Sbjct: 314 LEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHAL 373

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
               +       PN   +N+ I G+CR+N  D+AL +F  M   GI+P+  T   L+   
Sbjct: 374 RFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVT 433

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
             +G L + +     +          D +    LMD++ KN      L L++ M +  I 
Sbjct: 434 VMEGRLKEGLFLFFRMFKMG---LEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIP 490

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DI   NV+IN       +  A  +F  +L+    PD++TYNT++   C   +LDEA+  
Sbjct: 491 ADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARI 550

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           + +L  T   P+ ++   +I  LC + D+  A         + + P    +++IIDG  +
Sbjct: 551 FEMLKFTPFGPNAVTLTILIHTLCKNSDMDGAL--------RIISPSIISYSIIIDGLCK 602

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            G +  A +I    +   +  +V  +  LI    + G + +A  L + ML +G+ PD
Sbjct: 603 RGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPD 659



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 112/280 (40%), Gaps = 53/280 (18%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP-D 152
           LKE L     M   G     LE D      ++   C   K    L L   ++Q+  +P D
Sbjct: 439 LKEGLFLFFRMFKMG-----LEPDAVAFCTLMDAFCKNMKPTIGLQLF-DLMQRNKIPAD 492

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           +   N ++N L K   +E+A      + E +  P+  TYN  I GYC +  LD+A  +F 
Sbjct: 493 IAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFE 552

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            +      PN VT                                       TIL+ +  
Sbjct: 553 MLKFTPFGPNAVTL--------------------------------------TILIHTLC 574

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           KN D   AL        + I   I++Y+++I+G C  G +  A   F Q +    LPDV+
Sbjct: 575 KNSDMDGAL--------RIISPSIISYSIIIDGLCKRGRVDEATNIFHQAIDAKILPDVV 626

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
            Y  L+   CK G+L EA+  Y  + + GV PD +  + +
Sbjct: 627 AYAILIRGCCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 666



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 9/166 (5%)

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML--- 463
           ++D   R G+++ A     L++  G   ++ + N ++    +G S+ D   +   ML   
Sbjct: 115 VLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKIL----KGLSV-DQIEVASRMLSLV 169

Query: 464 LD-GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           LD G  P+V T+  LI   C  G +  A +L+  M +RGI PD+I Y+ LI G+   G +
Sbjct: 170 LDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGML 229

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
               ++F++    G+ +D + F      Y +      A D++++ L
Sbjct: 230 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRML 275



 Score = 43.1 bits (100), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 39/81 (48%)

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           LCK G +++A ++  +  + +  P+   Y   I G C+V  L +A  L+  M  NG++P+
Sbjct: 600 LCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRNGVKPD 659

Query: 223 RVTHNILVHALCKKGLLGDAV 243
            +    L      K L+   V
Sbjct: 660 DLLQRALSEYKPPKWLMSKGV 680


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 212/439 (48%), Gaps = 15/439 (3%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           +R L   G++  AL    +++     PD  T   L+ +L   G   +A  V+        
Sbjct: 72  LRSLVRRGELDEAL----RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACG---- 123

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+   YNA + GYC   +LD A  L + M    + P+  T+N L+  LC +G   +A+ 
Sbjct: 124 -PDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALA 179

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L E+L     +   DV+T TIL+++  K     QA+ L ++M  K    DIV YNV++N
Sbjct: 180 VLDEMLRR---RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 236

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G +  A  +   +   G  P+ ++YN +L  LC   + ++A    G + + G  P
Sbjct: 237 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 296

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           + +++  +I  LC  G +  A E L  + +    P    +N ++  + +   +  A +  
Sbjct: 297 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 356

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           DLM+S G   ++ ++N L+ A  R G +  A  L  ++   G  P + +YN +I      
Sbjct: 357 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 416

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G    AL+L +EM+ +G+ PDIITY+ +  G C    +++A   F K+Q +G+  + + +
Sbjct: 417 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY 476

Query: 545 RILKKRYRRMKESDKARDI 563
             +     + +E+  A D+
Sbjct: 477 NAIILGLCKRRETHSAIDL 495



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 205/421 (48%), Gaps = 6/421 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + A++   C  G++  A   RR + +    PD  T+N L+  LC  G    A  V+
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAA---RRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVL 181

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM   R  P+  TY   +   C+ +   +A+ L   M + G  P+ VT+N++V+ +C++
Sbjct: 182 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 241

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + DA++FL  + +        + ++  I++           A  L  +M QK    ++
Sbjct: 242 GRVDDAIEFLKNLPSYG---CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 298

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V +N+LI+  C  G +  A     Q+ K G  P+ ++YN LL+  CKQ K+D+A  F  +
Sbjct: 299 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL 358

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G  PD +SY T++  LC  G++  A E L  + +K   P    +N +IDG  + G 
Sbjct: 359 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 418

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
              A  + + M+S G+  ++ T++ +     R   I DA     ++   GI P+   YN 
Sbjct: 419 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 478

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +I   C     H A+ L+  M+  G  P+  TYT LI+G    G +KEA ++  ++ + G
Sbjct: 479 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 538

Query: 537 L 537
           +
Sbjct: 539 V 539



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 145/275 (52%), Gaps = 3/275 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V++ LC   +   A  L  +M QKG  P+V+T N L++ LC+ G +E A  V+ ++ +  
Sbjct: 269 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 328

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN  +YN  +  +C+  ++DKA+     M + G  P+ V++N L+ ALC+ G +  AV
Sbjct: 329 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 388

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L ++   D G A   +I+   ++D   K G   +AL L N+M  K +Q DI+ Y+ + 
Sbjct: 389 ELLHQL--KDKGCAPV-LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 445

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C    I  A   F ++   G  P+ + YN ++  LCK+ +   A   +  +   G  
Sbjct: 446 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 505

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           P++ +Y  +I+GL   G I +AR+ L  +  + VV
Sbjct: 506 PNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 540


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 191/410 (46%), Gaps = 38/410 (9%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
            C   ++  AL    KM++ G  PD++T   L+N  C+   +  A ++   M EM   PN
Sbjct: 126 FCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPN 185

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
              YN  I G C+  ++D AL L + M  +GIRP+ VT+N L+  LC  G   DA + + 
Sbjct: 186 VVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMV- 244

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
                                                + M ++ I  D+  +N LI+   
Sbjct: 245 -------------------------------------SCMTKREIYPDVFTFNALIDACV 267

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G IS A   + +M++R   PD++TY+ L+  LC   +LDEA   +G +   G  PD +
Sbjct: 268 KEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVV 327

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y  +I G C    +    +    M ++ VV     + V+I GY R G L+ A  I   M
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWM 387

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +  GV  N+ T+N L+      G I  A  +  +M   G+  D+ TYN++I   C  G +
Sbjct: 388 VFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEV 447

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
             A  LY  +  +G+TPDI TYT ++ G   +G   EA+ +F K++  G+
Sbjct: 448 ADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGI 497



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 196/425 (46%), Gaps = 41/425 (9%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
            D+ R ++ I  +    K    ++L  +M   G   ++ T N L+N  C+   L  A   
Sbjct: 82  ADFSRLLSAISKM---KKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           + +M ++   P+  T+ + + G+CR + +  AL++F  M   G  PN V +N ++  LCK
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
                                                K  D   AL L N M    I+ D
Sbjct: 199 S------------------------------------KQVD--NALDLLNRMEVDGIRPD 220

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
            V YN LI+G C +G    A      M KR   PDV T+N L++   K+G++ EA   Y 
Sbjct: 221 AVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYE 280

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + +  + PD ++Y  +I GLC++  + +A +    M+ K   P+   ++++I+GY +  
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSK 340

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            + +   +   M   GV  N  T+  LI    R G +  A  + K M+  G+ P++ TYN
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYN 400

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           +L+   C+ G I  AL +  +M + G+  DI+TY  +I+G C  G + +A +++  +   
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLK 460

Query: 536 GLAID 540
           GL  D
Sbjct: 461 GLTPD 465



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 194/386 (50%), Gaps = 3/386 (0%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M + RP P+ A ++  ++   ++ + D  ++L+  M   GI  N  T NIL++  C+   
Sbjct: 72  MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L  A+ FLG+++         D++T   L++ + +    + AL +++ M +   + ++V 
Sbjct: 132 LSLALSFLGKMMKLGH---EPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVI 188

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           YN +I+G C +  + +A     +M   G  PD +TYN+L++ LC  G+ D+A+     ++
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMT 248

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           K  + PD  ++  +I      G I +A E    M+ +S+ P+   ++++I G      L 
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   M+S G   +V T++ LI    +   +     L  EM   G+  +  TY +LI
Sbjct: 309 EAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLI 368

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G +++A +++  M+  G+ P+IITY  L+ G C  G +++A  + A +Q  G+ 
Sbjct: 369 QGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMD 428

Query: 539 IDHIPFRILKKRYRRMKESDKARDIH 564
            D + + I+ +   +  E   A D++
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDLY 454



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 152/290 (52%), Gaps = 1/290 (0%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            + LW  M    I  ++   N+L+N FC    +S A ++  +M+K G  PD++T+ +LLN
Sbjct: 100 VIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLN 159

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C+  ++ +A + +  + + G  P+ + Y TII GLC    +  A + L  M    + P
Sbjct: 160 GFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRP 219

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   +N +I G    G   +A  +   M    +  +VFTFNALI A  + G I +A  L 
Sbjct: 220 DAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELY 279

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           +EM+   + PD+ TY+LLI   C    +  A Q++  M+ +G  PD++TY+ LI G+C  
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKS 339

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
             ++   ++F ++   G+  + + + +L + Y R  + + A +I  KW++
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIF-KWMV 388



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 122/235 (51%), Gaps = 3/235 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+I  A  L  +MI++   PD++T++ L+  LC    L++A+ +   M      P+  TY
Sbjct: 270 GRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTY 329

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  I GYC+  +++  + LF  M+  G+  N VT+ +L+   C+ G L  A +    ++ 
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVF 389

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   ++IT  +L+     NG   +AL +  DM +  +  DIV YN++I G C  G+
Sbjct: 390 ---CGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGE 446

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           ++ A+  +C +  +G  PD+ TY  ++  L K+G   EA   +  + + G+ P++
Sbjct: 447 VADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNE 501



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 78/167 (46%)

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           N++++ + RC  LS A S    M+  G   ++ TF +L+    RG  I+DA  +   M+ 
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVE 179

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            G  P+V  YN +I   C    +  AL L + M   GI PD +TY  LI G C  G   +
Sbjct: 180 MGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDD 239

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           A  + + +    +  D   F  L     +     +A +++++ + R+
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRS 286


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 212/426 (49%), Gaps = 5/426 (1%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           TA+ L R+M   G   D++T N L+N   ++G    +  V   + +    PN  T    I
Sbjct: 74  TAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLI 133

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   ++ +ALH    +   G   N+V +  L++ LCK G    A++ L  V    DG
Sbjct: 134 KGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRV----DG 189

Query: 256 K-ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           K    +V+    ++DS  K     +A  L+++M  K I  D+V Y+ LI+GFC+ G ++ 
Sbjct: 190 KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLND 249

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A   F +M+     PDV T++ L++  CK+G++ EA +   ++ K G+ PD ++Y +++ 
Sbjct: 250 AIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMD 309

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C+   + KA+    +M +  V      +N++I+G+ +   +  A ++   M    +  
Sbjct: 310 GYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIP 369

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +V T+N+LI    + G I  A  L  EM   G+  D  TYN ++ A C    +  A+ L 
Sbjct: 370 DVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALL 429

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
            +M   GI PD+ TYT LI G C  G +K+A+ +F  +   G  I    + ++ + +   
Sbjct: 430 TKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDN 489

Query: 555 KESDKA 560
              DKA
Sbjct: 490 DLFDKA 495



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 213/448 (47%), Gaps = 38/448 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I+ LCL G+I  AL    K++  G   + + +  L+N LCK+G    A  ++R +   
Sbjct: 131 TLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGK 190

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   YN  I   C+V  +++A  L+S M + GI P+ VT++ L+   C  G L D 
Sbjct: 191 LVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLND- 249

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                                A+ L+N M  + I  D+  +++L
Sbjct: 250 -------------------------------------AIGLFNKMISEEINPDVYTFSIL 272

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++GFC  G +  A      M+K+G  PDV+TY +L++  C   ++++A   +  +++ GV
Sbjct: 273 VDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGV 332

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             +  SY  +I G C    + +A      M  K+++P+   +N +IDG  + G +S A  
Sbjct: 333 TANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALK 392

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M   GV  +  T+N+++ A  +   +  A +L  +M  +GI PD++TY +LI   C
Sbjct: 393 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLC 452

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +  A  +++++L +G    + TYT +I+G C      +A  + +K++  G   +  
Sbjct: 453 KGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAK 512

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLR 570
            + I+        E+D A  + ++ + R
Sbjct: 513 TYEIIILSLFEKDENDMAEKLLREMIAR 540



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 209/428 (48%), Gaps = 3/428 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +++     P +     ++  L KI   + A  + REM     + +  T+N  I  + ++ 
Sbjct: 46  RILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLG 105

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
               +  +F+ +   G  PN +T   L+  LC KG +  A+ F  +V+A   G   + V 
Sbjct: 106 HTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVA--LGFHLNKVC 163

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             T L++   K G    AL L   +  K +Q ++V YN +I+  C    ++ AF  + +M
Sbjct: 164 YGT-LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 222

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           + +G  PDV+TY+ L++  C  GKL++A   +  +    + PD  ++  ++ G C  G +
Sbjct: 223 VSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRV 282

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A+  L  M+++ + P+   +  ++DGY     ++ A SI + M   GV++NV ++N +
Sbjct: 283 KEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIM 342

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    +   + +A +L KEM    I PDV TYN LI   C  G I  AL+L DEM  RG+
Sbjct: 343 INGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGV 402

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             D ITY  ++   C    + +A  +  K++  G+  D   + IL     +      A++
Sbjct: 403 PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQN 462

Query: 563 IHQKWLLR 570
           I +  L++
Sbjct: 463 IFEDLLVK 470



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 162/292 (55%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A++L  +M    I +D+V +N+LIN F   G    +F+ F  +LK+G+ P+ IT  TL+ 
Sbjct: 75  AISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIK 134

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LC +G++ +A HF+  +   G   +++ Y T+I GLC  G    A + L  +  K V P
Sbjct: 135 GLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQP 194

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
              ++N IID   +   ++ AF +   M+S G+S +V T++ALI      G + DA  L 
Sbjct: 195 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLF 254

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            +M+ + I PDV+T+++L+   C  G +  A  +   M+++GI PD++TY  L+ G+C  
Sbjct: 255 NKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLV 314

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             + +A+ +F  +   G+  +   + I+   + ++K+ D+A ++ ++   +N
Sbjct: 315 KQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKN 366



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 156/316 (49%), Gaps = 8/316 (2%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           ++ E  D    M   G     +  D   + A+I   C+ GK+  A+ L  KMI +   PD
Sbjct: 211 LVNEAFDLYSEMVSKG-----ISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPD 265

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V T + LV+  CK G +++A +V+  M +    P+  TY + + GYC V +++KA  +F+
Sbjct: 266 VYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFN 325

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
           TMA  G+  N  ++NI+++  CK   + +A+    E+   +      DV+T   L+D   
Sbjct: 326 TMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKN---IIPDVVTYNSLIDGLC 382

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K+G    AL L ++M  + +  D + YN +++  C N  +  A A   +M   G  PD+ 
Sbjct: 383 KSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMY 442

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TY  L++ LCK G+L +A + +  L   G      +Y  +IQG C +    KA   L  M
Sbjct: 443 TYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKM 502

Query: 393 LEKSVVPEPHIWNVII 408
            +   +P    + +II
Sbjct: 503 EDNGCIPNAKTYEIII 518



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 137/275 (49%), Gaps = 3/275 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C  G++  A  +   M+++G  PDV+T+  L++  C +  + KA  +   M++  
Sbjct: 272 LVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGG 331

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            + N  +YN  I G+C++ ++D+A++LF  M    I P+ VT+N L+  LCK G +  A+
Sbjct: 332 VTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYAL 391

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K + E+    D     D IT   ++D+  KN    +A+AL   M  + IQ D+  Y +LI
Sbjct: 392 KLVDEM---HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILI 448

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G +  A   F  +L +G+   V TY  ++   C     D+A      +   G  
Sbjct: 449 DGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCI 508

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           P+  +Y+ II  L    +   A + L  M+ + ++
Sbjct: 509 PNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 140/288 (48%)

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
           D+   ++ +N +   N    I  +  ++          +A +   +M   G   D++T+N
Sbjct: 36  DEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFN 95

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            L+NC  + G    +   +  + K G  P+ I+  T+I+GLC+ G I +A  F   ++  
Sbjct: 96  ILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVAL 155

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
                   +  +I+G  + G  S A  +   +    V  NV  +N +I +  +   + +A
Sbjct: 156 GFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 215

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           F L  EM+  GI PDV TY+ LI   C LG ++ A+ L+++M+   I PD+ T++ L+ G
Sbjct: 216 FDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDG 275

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            C  G +KEA+ V A +   G+  D + +  L   Y  +K+ +KA+ I
Sbjct: 276 FCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSI 323



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 5/119 (4%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  M+D G     ++ D   +  +I  LC GG++  A  +   ++ KG    V T+  ++
Sbjct: 429 LTKMKDEG-----IQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMI 483

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
              C     +KA  ++ +M +    PN  TY   I      +E D A  L   M   G+
Sbjct: 484 QGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 226/435 (51%), Gaps = 5/435 (1%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T + L ++M  KG   +++T + L+N  C +G +  +  ++ ++ ++   PN  T+   +
Sbjct: 28  TVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLM 87

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   E+ K LH    +     + N+V++  L++ LCK G    A+K L  +   +D 
Sbjct: 88  KGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMI---EDR 144

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               +V+  + ++D   K+    +A  L+++M  + I  +++ YN LI  FCL G +  A
Sbjct: 145 STRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGA 204

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           F+   +M+ +   PDV T++ L++ LCK+GK   A   +  + + GV P+  SY  +I G
Sbjct: 205 FSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMING 262

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           LC    + +A   L  ML K++VP+   +N +IDG  + G +++A ++ + M   G  ++
Sbjct: 263 LCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 322

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           V T+ +L+ A  +  ++  A +L  +M   GI P ++TY  LI   C  G +  A +L+ 
Sbjct: 323 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQ 382

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
            +L +G   D+ TYT +I G C  G   EA  + +K++  G   + + F I+ +      
Sbjct: 383 HLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKD 442

Query: 556 ESDKARDIHQKWLLR 570
           E+DKA  +  + + +
Sbjct: 443 ENDKAEKLLHEMIAK 457



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 194/380 (51%), Gaps = 5/380 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +++ LCL G++   L    K++ +    + +++  L+N LCK G+   A  ++R + + 
Sbjct: 85  TLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDR 144

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   Y+A I G C+   +++A  L+S M    I PN +T+N L+ A C  G L  A
Sbjct: 145 STRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGA 204

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E++  +      DV T +IL+D+  K G    A  +++ M Q  +  ++ +YN++
Sbjct: 205 FSLLHEMILKN---INPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIM 259

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING C    +  A     +ML +  +PD +TYN+L++ LCK G++  A +    +   G 
Sbjct: 260 INGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQ 319

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D ++Y +++  LC + ++ KA    + M E+ + P  + +  +IDG  + G L NA  
Sbjct: 320 PADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQE 379

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   +L  G   +V+T+  +I    + G   +A ++K +M  +G  P+  T+ ++I +  
Sbjct: 380 LFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLF 439

Query: 483 NLGHIHLALQLYDEMLRRGI 502
                  A +L  EM+ +G+
Sbjct: 440 EKDENDKAEKLLHEMIAKGL 459



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 200/414 (48%), Gaps = 5/414 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G++  +  L  K+++ G  P+ +T   L+  LC  G+++K  H   ++    
Sbjct: 51  LINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQA 110

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  +Y   + G C+  E   A+ L   + +   RPN V ++ ++  LCK  L+ +A 
Sbjct: 111 FQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAY 170

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+   D  +   +VIT   L+ ++   G    A +L ++M  KNI  D+  +++LI
Sbjct: 171 DLYSEM---DAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILI 227

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G   +A   F  M++ G  P+V +YN ++N LCK  ++DEA +    +    + 
Sbjct: 228 DALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMV 285

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y ++I GLC  G I  A   +  M  +    +   +  ++D   +  +L  A ++
Sbjct: 286 PDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATAL 345

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+   ++T+ ALI    +GG + +A  L + +L+ G   DV+TY ++I   C 
Sbjct: 346 FMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCK 405

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            G    AL +  +M   G  P+ +T+  +I+    +    +AE++  ++   GL
Sbjct: 406 EGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 186/392 (47%), Gaps = 5/392 (1%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M  +R +     +N  +    ++      + L   M   GI  N VT +IL++  C  G 
Sbjct: 1   MLLVRHTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQ 60

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           +  +   LG++L         + IT T LM      G+  + L   + +  +  QT+ V+
Sbjct: 61  MAFSFSLLGKILKLG---YXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVS 117

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y  L+NG C  G+   A      +  R   P+V+ Y+ +++ LCK   ++EA   Y  + 
Sbjct: 118 YGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMD 177

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
              + P+ I+Y T+I   C+ G ++ A   L  M+ K++ P+ + ++++ID    C +  
Sbjct: 178 AREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDAL--CKEGK 235

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           NA  I   M+  GV+ NV+++N +I    +   + +A +L +EML   + PD  TYN LI
Sbjct: 236 NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLI 295

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G I  AL L +EM  RG   D++TYT L+   C   N+ +A  +F K++  G+ 
Sbjct: 296 DGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ 355

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
                +  L     +      A+++ Q  L++
Sbjct: 356 PTMYTYTALIDGLCKGGRLKNAQELFQHLLVK 387



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 176/377 (46%), Gaps = 6/377 (1%)

Query: 92  LILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           L LK  + +L    D   V    +T+   +  ++  LC  G+   A+ L R +  + T P
Sbjct: 90  LCLKGEVKKLLHFHDK-VVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRP 148

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           +V+ ++ +++ LCK   + +A  +  EM      PN  TYN  I  +C   +L  A  L 
Sbjct: 149 NVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLL 208

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M    I P+  T +IL+ ALCK+G   +A +    ++         +V +  I+++  
Sbjct: 209 HEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMV---QMGVNPNVYSYNIMINGL 263

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K     +A+ L  +M  KN+  D V YN LI+G C +G I+SA     +M  RG   DV
Sbjct: 264 CKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADV 323

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TY +LL+ LCK   LD+A+  +  + + G+ P   +Y  +I GLC  G +  A+E    
Sbjct: 324 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQH 383

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           +L K    +   + V+I G  + G    A +I+  M   G   N  TF  +I +      
Sbjct: 384 LLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDE 443

Query: 452 IFDAFSLKKEMLLDGIF 468
              A  L  EM+  G+ 
Sbjct: 444 NDKAEKLLHEMIAKGLL 460



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 151/316 (47%), Gaps = 37/316 (11%)

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           + TS +I    ++ S  K       ++L   M  K I+ ++V  ++LIN FC  G ++ +
Sbjct: 5   RHTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFS 64

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           F+   ++LK G+ P+ IT+ TL+  LC +G++ +  HF+  +       +Q+SY T++ G
Sbjct: 65  FSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNG 124

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           LC  G+   A + L  + ++S  P   +++ IIDG   C D                   
Sbjct: 125 LCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGL--CKD------------------- 163

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
                           + +A+ L  EM    IFP+V TYN LI A C  G +  A  L  
Sbjct: 164 --------------KLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLH 209

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
           EM+ + I PD+ T++ LI   C  G  K A+++F  +  +G+  +   + I+     + K
Sbjct: 210 EMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCK 267

Query: 556 ESDKARDIHQKWLLRN 571
             D+A ++ ++ L +N
Sbjct: 268 RVDEAMNLLREMLHKN 283



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 5/152 (3%)

Query: 79  NEGNPQAVF---NALDLILK-ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKI 134
           + G P  V    + LD + K +NLD+   +      R    T Y  + A+I  LC GG++
Sbjct: 316 HRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYT-YTALIDGLCKGGRL 374

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
             A  L + ++ KG   DV T+  +++ LCK G  ++A  +  +M +    PN  T+   
Sbjct: 375 KNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEII 434

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           I      +E DKA  L   M   G+   R  H
Sbjct: 435 IRSLFEKDENDKAEKLLHEMIAKGLLGFRNFH 466


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 215/429 (50%), Gaps = 8/429 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQK--GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           V++  C  G+   A+ L  +M +     VPD +T+N LVN  CK   L +A  +   M +
Sbjct: 118 VLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKK 177

Query: 182 MRP-SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  TY+  I  YC+  E+ + L L   M   G++ +   ++ L+ A C +G + 
Sbjct: 178 GGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIE 237

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
              +   E+L     K + +V+T + LM    + G   +A  +  DM  + ++ D+VAY 
Sbjct: 238 TGRELFDEMLRR---KVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYT 294

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           VL +G C NG    A      M+++G  P  +TYN ++N LCK+ ++D+A     ++ K 
Sbjct: 295 VLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKK 354

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW--NVIIDGYGRCGDLS 418
           G  PD ++Y T+++GLC  G I +A +    +L +    +P ++  N +I G  + G + 
Sbjct: 355 GKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVH 414

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           +A  I   M+  G+  N+ T+N LI        + +A  L K  +  G  P+  TY+++I
Sbjct: 415 DAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMI 474

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C +  + +A  L+ +M   GI P +I Y  L+   C   ++++A  +F +++ +   
Sbjct: 475 NGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHN 534

Query: 539 IDHIPFRIL 547
           +D + F I+
Sbjct: 535 VDVVSFNII 543



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/502 (26%), Positives = 241/502 (48%), Gaps = 17/502 (3%)

Query: 69  RHWFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDL 128
           +   +N  S     P ++ +A+ L     +D   T   + P   TL  + R+        
Sbjct: 4   KRLLNNSSSIAHTQPHSLSDAVSL-FHRTIDNDPTSPPSEPACSTLIDNLRK-------- 54

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
               +    + +  KM+    +P   + + L            A  V+  M++     N 
Sbjct: 55  --ARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNV 112

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANN--GIRPNRVTHNILVHALCKKGLLGDAVKFL 246
              N  + G+CR  + DKA+ LFS M  N   + P+ VT+N LV+  CK   L +A + L
Sbjct: 113 YNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEA-RVL 171

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            E +    G    +++T ++L+D Y K+G+  + L L  +M ++ ++ D+  Y+ LI+ F
Sbjct: 172 FEAM-KKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAF 230

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C  GDI +    F +ML+R   P+V+TY+ L+  L + G+  EAS     ++  GV PD 
Sbjct: 231 CGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDV 290

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           ++Y  +  GLC +G    A + L  M++K   P    +NV+++G  +   + +AF + ++
Sbjct: 291 VAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEM 350

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG--IFPDVFTYNLLIGASCNL 484
           M+  G   +  T+N L+      G I +A  L K +L +   + PDVFT N LI   C  
Sbjct: 351 MVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKE 410

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G +H A +++  M+  G+  +I+TY  LI+G+ A   + EA +++      G + + + +
Sbjct: 411 GRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTY 470

Query: 545 RILKKRYRRMKESDKARDIHQK 566
            ++     +M+    AR +  K
Sbjct: 471 SVMINGLCKMQMLSVARGLFCK 492



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 210/473 (44%), Gaps = 47/473 (9%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
            + M+  G  R  L T    +  +I   C  G++G  L L  +M ++G   DV  ++ L+
Sbjct: 172 FEAMKKGGDCRPNLVT----YSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLI 227

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           +  C  GD+E    +  EM   + SPN  TY+  + G  R     +A  +   M   G+R
Sbjct: 228 SAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVR 287

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P+ V + +L   LCK G  GDA+K L  ++   +   T   +T  ++++   K      A
Sbjct: 288 PDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGT---LTYNVVVNGLCKEDRMDDA 344

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF--LPDVITYNTLL 338
             +   M +K  + D V YN L+ G C  G I  A   +  +L   F   PDV T N L+
Sbjct: 345 FGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLI 404

Query: 339 NCLCKQGKLDEASHFY--------------------GVLS---------------KTGVA 363
             LCK+G++ +A+  +                    G L+               ++G +
Sbjct: 405 QGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFS 464

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y  +I GLC    +  AR     M +  + P    +N ++    R   L  A S+
Sbjct: 465 PNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSL 524

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M +   + +V +FN +I    + G +  A  L  EM +  + PD  T+++LI     
Sbjct: 525 FQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSK 584

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LG +  A+ LY++M+  G  P ++ +  L+KG+  +G   E E++ + +  + 
Sbjct: 585 LGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKG---ETEKIISLLHQMA 634



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 210/474 (44%), Gaps = 41/474 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++   C   ++  A  L   M + G   P+++T++ L++  CK G++ +   ++ EM   
Sbjct: 155 LVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMERE 214

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +   Y++ I+ +C   +++    LF  M    + PN VT++ L+  L + G   +A
Sbjct: 215 GLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREA 274

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L ++ A        DV+  T+L D   KNG    A+ + + M QK  +   + YNV+
Sbjct: 275 SEMLKDMTARG---VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVV 331

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL--SKT 360
           +NG C    +  AF     M+K+G  PD +TYNTLL  LC  GK+ EA   + +L   K 
Sbjct: 332 VNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKF 391

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            V PD  +   +IQGLC  G +  A     SM+E  +      +N +I+GY     L  A
Sbjct: 392 HVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEA 451

Query: 421 FSIRDLMLSFGVSSNVFTF-----------------------------------NALILA 445
             +    +  G S N  T+                                   NAL+ +
Sbjct: 452 LKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTS 511

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             R  S+  A SL +EM       DV ++N++I  +   G +  A +L  EM    + PD
Sbjct: 512 LCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPD 571

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            +T++ LI      G + EA  ++ K+ + G     + F  L K Y    E++K
Sbjct: 572 AVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEK 625



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 183/392 (46%), Gaps = 10/392 (2%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E  + LK M   G     +  D   +  +   LC  G+ G A+ +   M+QKG  P  L
Sbjct: 272 REASEMLKDMTARG-----VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTL 326

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+N +VN LCK   ++ A  V+  M +    P+  TYN  + G C   ++ +A+ L+  +
Sbjct: 327 TYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386

Query: 215 ANNG--IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            +    ++P+  T N L+  LCK+G + DA +    ++   +     +++T   L++ Y 
Sbjct: 387 LSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMV---EMGLQGNIVTYNFLIEGYL 443

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
                 +AL LW    +     + + Y+V+ING C    +S A   FC+M   G  P VI
Sbjct: 444 AARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVI 503

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            YN L+  LC++  L++A   +  +       D +S+  II G    GD+  A+E L  M
Sbjct: 504 DYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEM 563

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
               +VP+   ++++I+ + + G L  A  + + M+S G    V  F++L+      G  
Sbjct: 564 FMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGET 623

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
               SL  +M    +  D    + ++   C++
Sbjct: 624 EKIISLLHQMADKDVVLDSKLTSTILACLCHM 655



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 144/313 (46%), Gaps = 6/313 (1%)

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P R+ +N    A  +   L DAV      + +D     S+   ST L+D+  K       
Sbjct: 3   PKRLLNNSSSIAHTQPHSLSDAVSLFHRTIDNDPTSPPSEPACST-LIDNLRKARQYDAV 61

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           +++++ M    +     + + L   F      S AF+    M KRGF  +V   N +L  
Sbjct: 62  VSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKG 121

Query: 341 LCKQGKLDEASHFYGVLSKT--GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
            C+ G+ D+A   +  + +    V PD ++Y T++ G C    + +AR  L   ++K   
Sbjct: 122 FCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEAR-VLFEAMKKGGD 180

Query: 399 PEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P++  ++V+ID Y + G++     + + M   G+ ++VF +++LI A    G I    
Sbjct: 181 CRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGR 240

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L  EML   + P+V TY+ L+      G    A ++  +M  RG+ PD++ YT L  G 
Sbjct: 241 ELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGL 300

Query: 517 CARGNMKEAEEVF 529
           C  G   +A +V 
Sbjct: 301 CKNGRAGDAIKVL 313


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 213/415 (51%), Gaps = 19/415 (4%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           ++G A  L  +M+ +G  PDV+T N +++ LCK+  ++KA+ V+R+M +    P+C TYN
Sbjct: 136 EVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYN 195

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
           + + GY    +L +A+ +   M+ +G  PN VT+++L+  LCK G   +A + L  ++  
Sbjct: 196 SLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMI-- 253

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
              +   +V T   L+  Y   GD  +   L + M Q  ++ D   +N+ I  +   G +
Sbjct: 254 -QSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRL 312

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A   F +M ++G +PD+I+Y T+++ LCK G+LD A   +  +   G++PD + +  +
Sbjct: 313 DEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNL 372

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I G  ++G   KA E    M+++ + P   ++  +ID   + G ++ A ++ DLM    V
Sbjct: 373 IHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASV 432

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             NV ++NA+I      G + +   L  +ML  G+ P+  T+N L+              
Sbjct: 433 KPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLL-------------- 478

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             D+ML  G+ PD+ T   LI   C  G +++   +F ++ +     D +   I+
Sbjct: 479 --DDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 189/393 (48%), Gaps = 2/393 (0%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
            K   P  +T+  L++  C +G L  A   + ++ +     N  ++   +   C      
Sbjct: 6   SKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTS 65

Query: 206 KALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
            A+++        G  P+  ++ +L+  LC +    +AV  +  ++A+D      +V++ 
Sbjct: 66  DAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLI-HMMAEDGDHCPPNVVSY 124

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T ++  +FK  +  +A  L+ +M  + I  D+V  N +I+G C    +  A     QM  
Sbjct: 125 TTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFD 184

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           +  +PD  TYN+L++     G+L EA      +S+ G  P+ ++Y  +I  LC  G   +
Sbjct: 185 KHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTE 244

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           ARE L SM++    P    +  ++ GY   GDL    ++ DLM+  GV  +   FN  I 
Sbjct: 245 AREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIY 304

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A  + G + +A     +M   G+ PD+ +Y  +I   C +G +  A+  + +M+  G++P
Sbjct: 305 AYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSP 364

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           DI+ +T LI G    G  ++AEE+F ++   G+
Sbjct: 365 DIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGI 397



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 170/377 (45%), Gaps = 54/377 (14%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++  A+ + ++M + G  P+ +T++ L++ LCK G   +A  ++  M + R +PN ATY
Sbjct: 205 GQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATY 264

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              + GY    +L +  +L   M  NG+RP+    NI ++A                   
Sbjct: 265 GGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYA------------------- 305

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                              Y K G   +A+  +N M Q+ +  DI++Y  +I+G C  G 
Sbjct: 306 -------------------YVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGR 346

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           + +A + FCQM+  G  PD++ +  L++     GK ++A   +  +   G+ P  + + T
Sbjct: 347 LDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTT 406

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I  L   G + +A+     M   SV P    +N II GY   G L     + D MLS G
Sbjct: 407 MIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVG 466

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N  TFN L+                 +ML  G+ PDV T N LI + C  G I   L
Sbjct: 467 LKPNAVTFNTLL----------------DDMLSMGLKPDVATCNTLIDSCCEDGRIEDVL 510

Query: 492 QLYDEMLRRGITPDIIT 508
            L+ EML +    D +T
Sbjct: 511 TLFREMLSKAAKTDTVT 527



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 195/412 (47%), Gaps = 6/412 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHVIREM 179
           +  +I   C  G +  A     ++I+ G   + ++   ++  LC       A + VIR  
Sbjct: 16  YTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNIVIRWT 75

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG--IRPNRVTHNILVHALCKKG 237
            ++  +P+  +Y   + G C   + ++A+ L   MA +G    PN V++  ++H   K+ 
Sbjct: 76  PKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKED 135

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            +G A     E+L   D     DV+T   ++D   K     +A  +   MF K+I  D  
Sbjct: 136 EVGKAYTLFCEML---DRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCT 192

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            YN L++G+  +G +  A     QM + G  P+ +TY+ L++CLCK G   EA      +
Sbjct: 193 TYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSM 252

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
            ++   P+  +Y  ++ G    GD+V+    +  M++  V P+ HI+N+ I  Y +CG L
Sbjct: 253 IQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRL 312

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             A    + M   G+  ++ ++  +I    + G +  A S   +M+ DG+ PD+  +  L
Sbjct: 313 DEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNL 372

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           I      G    A +L+ EM+ RGI P ++ +T +I      G + EA+ +F
Sbjct: 373 IHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLF 424



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 24/244 (9%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L E +     MR  G     L  D   +  +I  LC  G++  A+    +MI  G  PD+
Sbjct: 312 LDEAMLTFNKMRQQG-----LMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDI 366

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +    L++     G  EKA+ +  EM +    P    +   I    +  ++ +A  LF  
Sbjct: 367 VVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDL 426

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M    ++PN V++N ++H     G L + +K L ++L+   G   + V  +T+L      
Sbjct: 427 MPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLS--VGLKPNAVTFNTLL------ 478

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                      +DM    ++ D+   N LI+  C +G I      F +ML +    D +T
Sbjct: 479 -----------DDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVT 527

Query: 334 YNTL 337
            N +
Sbjct: 528 ENII 531


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 212/439 (48%), Gaps = 3/439 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G    A  + ++M+  G  P+ +T++ LV  LCK+G +++A  ++++M      P+  TY
Sbjct: 363 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 422

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I G+ R +    A  L S M N GI PN  T++I++H LC+ G    A   L E+  
Sbjct: 423 NLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT 482

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   +      L+  Y + G+   A  +++ M + N+  D+  YN LI G    G 
Sbjct: 483 KG---LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 539

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  +  YF QM +RG LP+  TY+ L++   K G L+ A      +  TG+ P+ + Y  
Sbjct: 540 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 599

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +++      DI K      SML++ V+ +  I+ ++I      G++  AF +   +   G
Sbjct: 600 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 659

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              +V  +++LI    +      AF +  EM   G+ P++  YN LI   C  G I  A 
Sbjct: 660 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 719

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            +++ +L +G+ P+ +TYT LI G C  G++  A  ++ ++   G+  D   + +L    
Sbjct: 720 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 779

Query: 552 RRMKESDKARDIHQKWLLR 570
               + ++A  + ++  LR
Sbjct: 780 SSAGDLEQAMFLIEEMFLR 798



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 232/504 (46%), Gaps = 43/504 (8%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  MR+ G   C L T    +  +I  LC  G +  A   ++ M   G VPD  T+  L+
Sbjct: 267 LVEMRERG---CGLNT--VTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALI 321

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           N LCK     +A  ++ EMS     PN   Y   I G+ R    D+A  +   M   G++
Sbjct: 322 NGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ 381

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLAD---------------------------- 252
           PN++T++ LV  LCK G +  A   L +++ D                            
Sbjct: 382 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRL 441

Query: 253 ----DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
               ++   + +V T +I++    ++G+  +A  L  +M  K ++ +   Y  LI+G+C 
Sbjct: 442 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 501

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G++S A   F +M K   LPD+  YN+L+  L K G+++E++ ++  + + G+ P++ +
Sbjct: 502 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 561

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I G   +GD+  A + +  ML+  + P   I+  +++ Y +  D+    S    ML
Sbjct: 562 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 621

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             GV  +   +  LI   +  G++  AF +   +  +G  PDV  Y+ LI   C      
Sbjct: 622 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADRE 681

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A  + DEM ++G+ P+I+ Y  LI G C  G++  A  VF  I   GL  + + +  L 
Sbjct: 682 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL- 740

Query: 549 KRYRRMKESDKARDIHQKWLLRNK 572
                +  S K  DI   + L N+
Sbjct: 741 -----IDGSCKVGDISNAFYLYNE 759



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 205/428 (47%), Gaps = 7/428 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A  L  +M   G  P+V T++ +++ LC+ G+ EKA  ++ EM+     PN   Y   I+
Sbjct: 438 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 497

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           GYCR   +  A  +F  M    + P+   +N L+  L K G + ++ K+  ++    +  
Sbjct: 498 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM---QERG 554

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              +  T + L+  Y KNGD   A  L   M    ++ + V Y  L+  +  + DI    
Sbjct: 555 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 614

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           + F  ML +G + D   Y  L++ L   G ++ A      + K G  PD   Y ++I GL
Sbjct: 615 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 674

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C   D  KA   L  M +K V P    +N +IDG  + GD+S A ++ + +L+ G+  N 
Sbjct: 675 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 734

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+ +LI    + G I +AF L  EML  GI PD F Y++L     + G +  A+ L +E
Sbjct: 735 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 794

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M  RG    I ++  L+ G C RG M+E  ++   I   GL  + +    ++     + E
Sbjct: 795 MFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL---TIENIISGLSE 850

Query: 557 SDKARDIH 564
           + K  ++H
Sbjct: 851 AGKLSEVH 858



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 216/470 (45%), Gaps = 61/470 (12%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G+   A  L  +M  KG  P+   +  L++  C+ G++  A  +  +M+++ 
Sbjct: 460 MIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 519

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   YN+ I G  +V  ++++   F+ M   G+ PN  T++ L+H   K G L  A 
Sbjct: 520 VLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAE 579

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + +  +L  D G   +DVI    L++SYFK+ D  +  + +  M  + +  D   Y +LI
Sbjct: 580 QLVQRML--DTGLKPNDVIYID-LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 636

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +    +G++ +AF     + K G +PDV  Y++L++ LCK    ++A      +SK GV 
Sbjct: 637 HNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 696

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ + Y  +I GLC  GDI  AR    S+L K +VP    +  +IDG  + GD+SNAF +
Sbjct: 697 PNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYL 756

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + ML+ G++ + F ++ L    +  G +  A  L +EM L G    + ++N L+   C 
Sbjct: 757 YNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCK 815

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKG---------------------------- 515
            G +   L+L   ++ RG+ P+ +T   +I G                            
Sbjct: 816 RGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARH 875

Query: 516 -------------------------HCARGNMKEA----EEVFAKIQTLG 536
                                    HC  GN+ +A    + + AK   +G
Sbjct: 876 FSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMG 925



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 212/469 (45%), Gaps = 22/469 (4%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH-----------------NYL 159
           D   H+A+   LC G     A  L  KMI+    P V+                   + L
Sbjct: 123 DAFAHLAM--SLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVL 180

Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
           V+   K G ++ A  V+  M +   +P+    NA +    R + +     +   M   GI
Sbjct: 181 VDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGI 240

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            P+  T++ L+ A CK      A K L E+     G  T   +T  +L+    ++G   +
Sbjct: 241 SPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNT---VTYNVLIAGLCRSGAVEE 297

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A     DM    +  D   Y  LING C +   + A A   +M      P+V+ Y  L++
Sbjct: 298 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 357

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
              ++G  DEA      +   GV P++I+Y  +++GLC  G + +A   L  M+  S  P
Sbjct: 358 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 417

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   +N+II+G+ R     +AF +   M + G+S NV+T++ +I    + G    A  L 
Sbjct: 418 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 477

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           +EM   G+ P+ F Y  LI   C  G++ LA +++D+M +  + PD+  Y  LI G    
Sbjct: 478 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 537

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G ++E+ + FA++Q  GL  +   +  L   Y +  + + A  + Q+ L
Sbjct: 538 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 586



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 188/413 (45%), Gaps = 42/413 (10%)

Query: 75  KDSDNEGNPQAVFNALDLILKEN----LDRLKTM---RDTGPVRCTLET--------DYR 119
           K+ D E   Q V   LD  LK N    +D L++     D   V  T ++        D R
Sbjct: 571 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNR 630

Query: 120 RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
            +  +I +L   G +  A  +   + + G+VPDV  ++ L++ LCK  D EKA  ++ EM
Sbjct: 631 IYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 690

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
           S+    PN   YNA I G C+  ++  A ++F+++   G+ PN VT+  L+   CK G +
Sbjct: 691 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDI 750

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +A     E+LA      T D    ++L       GD  QA+ L  +MF +     I ++
Sbjct: 751 SNAFYLYNEMLATG---ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSF 806

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N L++GFC  G +         ++ RG +P+ +T   +++ L + GKL E          
Sbjct: 807 NNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEV--------- 857

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREF---LLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
                      TI   L        AR F    + M+ +  +P   + ++I D + + G+
Sbjct: 858 ----------HTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRD-HCKEGN 906

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           L  A  +RD++++        ++ A++    R G + +A +L KEM   GI P
Sbjct: 907 LDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICP 959


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 216/473 (45%), Gaps = 38/473 (8%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
            K+  A +   KMI+ G    V ++N ++N  CK G ++ A+ + +EM +    P  ATY
Sbjct: 414 AKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATY 473

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
            + I+GYC+   + KA  L+  M   GI PN VT   L+  LC+   + +A K   E++ 
Sbjct: 474 TSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMV- 532

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             + K   + +T  +L++ + + G+  +A  L ++M +K +  D   Y  LI G C  G 
Sbjct: 533 --ELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGR 590

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +S A  +   +  +    D + Y  LL   CK+G++ EA      +   G+  D +SY  
Sbjct: 591 VSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAV 650

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G     D +   E L  M  K + P+  I+ ++IDG+ + G+L  AF    +M+  G
Sbjct: 651 LISGALNQNDRI-LFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEG 709

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEML---------------------------- 463
              N  T+ AL+    + G + +A  L K ML                            
Sbjct: 710 YVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENAL 769

Query: 464 ------LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
                 L G F +  TYN+LI   C +G    A +L D M+  G+ PD ITY+  I  +C
Sbjct: 770 QLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYC 829

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            RGN+  A +++  +   GL  D + F  L        E D+A  +    +LR
Sbjct: 830 KRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLR 882



 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 206/437 (47%), Gaps = 10/437 (2%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
            K M D G     L+     + ++I   C  G +  A  L  +M  KG  P+ +T   L+
Sbjct: 458 FKEMVDKG-----LKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALI 512

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
             LC+I  + +A  +  EM E++  PN  TYN  I G+CR     +A  L   M   G+ 
Sbjct: 513 CGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLS 572

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P+  T+  L+  LC  G + +A +F+ ++          D +  T L+  + K G   +A
Sbjct: 573 PDTYTYRPLIAGLCSTGRVSEAKEFINDL---HHKHQRLDELCYTALLQGFCKEGRIKEA 629

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           L    +M  + +Q D+V+Y VLI+G  LN +    F    +M  +G  PD + Y  L++ 
Sbjct: 630 LVARQEMVGRGLQMDLVSYAVLISG-ALNQNDRILFELLREMHGKGMQPDNVIYTILIDG 688

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
             K G L +A  F+ ++   G  P+ ++Y  ++ GL   G + +A+     ML    +P 
Sbjct: 689 FIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPN 748

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +   +D   + G++ NA  + + ML  G  +N  T+N LI    + G   +A  L  
Sbjct: 749 HITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLD 807

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            M+  G+ PD  TY+  I   C  G++  A+ +++ ML+RG+ PD + +  LI   C  G
Sbjct: 808 VMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNG 867

Query: 521 NMKEAEEVFAKIQTLGL 537
            +  A ++   +   GL
Sbjct: 868 ELDRALQLRNDMMLRGL 884



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 220/448 (49%), Gaps = 8/448 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  L   G I  A  L  K+ + G VP++  +N ++N LCK G LE+A+ +   M+E 
Sbjct: 335 GLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAER 394

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +PN  TY   I G+ R  +LD A + F+ M   GI     ++N +++  CK G +  A
Sbjct: 395 GLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMA 454

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L + + D   K T  V T T L+  Y K+G   +A  L+++M  K I  + V +  L
Sbjct: 455 -ELLFKEMVDKGLKPT--VATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTAL 511

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G C    ++ A   F +M++   LP+ +TYN L+   C++G    A      + K G+
Sbjct: 512 ICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGL 571

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           +PD  +Y+ +I GLC  G + +A+EF+  +  K    +   +  ++ G+ + G +  A  
Sbjct: 572 SPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALV 631

Query: 423 IRDLMLSFGVSSNVFTFNALIL-AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            R  M+  G+  ++ ++  LI  A  +   I   F L +EM   G+ PD   Y +LI   
Sbjct: 632 ARQEMVGRGLQMDLVSYAVLISGALNQNDRIL--FELLREMHGKGMQPDNVIYTILIDGF 689

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI-D 540
              G++  A + +  M+  G  P+ +TYT L+ G    G + EA+ +F ++  +G AI +
Sbjct: 690 IKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRM-LVGEAIPN 748

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWL 568
           HI +        +    + A  +H   L
Sbjct: 749 HITYGCFLDHLTKEGNMENALQLHNAML 776



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 217/467 (46%), Gaps = 14/467 (2%)

Query: 85  AVFNALDLI--LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRR 142
           A+ NAL  I   ++ L+   T+ + G     ++ D   +  V++ LC       A  +  
Sbjct: 195 ALLNALARIRKFRQVLELFDTLVNAG-----VKPDCYIYTVVVKCLCELKDFNKAKEIIN 249

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +    G    ++T+N  +N LCK   + +A  V R + E     +  TY   + G CR+ 
Sbjct: 250 QAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQ 309

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK--ATSD 260
           E +  + +   M   G  P+    + L+  L K G +  A + L +V     GK     +
Sbjct: 310 EFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKV-----GKLGVVPN 364

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           +     +++S  K G   +A  L++ M ++ +  + V Y +LI+GF     +  AF YF 
Sbjct: 365 LFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFN 424

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +M++ G    V +YN+++NC CK GK+  A   +  +   G+ P   +Y ++I G C  G
Sbjct: 425 KMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDG 484

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            + KA +    M  K + P    +  +I G  +   ++ A  + D M+   +  N  T+N
Sbjct: 485 LVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYN 544

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            LI    R G+   AF L  EM+  G+ PD +TY  LI   C+ G +  A +  +++  +
Sbjct: 545 VLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHK 604

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
               D + YT L++G C  G +KEA     ++   GL +D + + +L
Sbjct: 605 HQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVL 651



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 206/412 (50%), Gaps = 8/412 (1%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D+L  +Y+ N+    G L     V+  M +    P   T +A +    R+ +  + L LF
Sbjct: 159 DMLIQHYVQNKRVMDGVL-----VVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELF 213

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
            T+ N G++P+   + ++V  LC+      A + + +  A+ +G + S ++T  + ++  
Sbjct: 214 DTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQ--AEGNGCSLS-IVTYNVFINGL 270

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K+   ++A+ +   + +K ++ D+V Y  L+ G C   +         +M++ G++P  
Sbjct: 271 CKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSE 330

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
              + L+  L K G ++ A      + K GV P+   Y ++I  LC  G + +A      
Sbjct: 331 AAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSV 390

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M E+ + P    + ++IDG+GR   L  AF   + M+  G+S+ V+++N++I  + + G 
Sbjct: 391 MAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGK 450

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           +  A  L KEM+  G+ P V TY  LI   C  G +  A +LY EM  +GI P+ +T+T 
Sbjct: 451 MKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTA 510

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           LI G C    M EA ++F ++  L +  + + + +L + + R   + +A ++
Sbjct: 511 LICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFEL 562



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 206/453 (45%), Gaps = 41/453 (9%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G +P+V T + L+N L +I    +   +   +      P+C  Y   +   C + + +KA
Sbjct: 185 GLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKA 244

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             + +    NG   + VT+N+ ++ LCK   + +AV+ +   L +   KA  D++T   L
Sbjct: 245 KEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVE-VKRSLGEKGLKA--DLVTYCTL 301

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +    +  +    + + ++M +        A + LI G    G I  AF    ++ K G 
Sbjct: 302 VLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGV 361

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL----------- 376
           +P++  YN+++N LCK GKL+EA   + V+++ G+ P+ ++Y  +I G            
Sbjct: 362 VPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFY 421

Query: 377 ------------------------CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
                                   C  G +  A      M++K + P    +  +I GY 
Sbjct: 422 YFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYC 481

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           + G +  AF +   M   G++ N  TF ALI    +   + +A  L  EM+   I P+  
Sbjct: 482 KDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEV 541

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TYN+LI   C  G+   A +L DEM+++G++PD  TY  LI G C+ G + EA+E    +
Sbjct: 542 TYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDL 601

Query: 533 QTLGLAIDHIPFRILKKRY---RRMKESDKARD 562
                 +D + +  L + +    R+KE+  AR 
Sbjct: 602 HHKHQRLDELCYTALLQGFCKEGRIKEALVARQ 634



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 161/352 (45%), Gaps = 32/352 (9%)

Query: 80  EGNPQAVFNALDLILKENLDR--------LKTMRDTGPVRCTLE-----------TDYRR 120
           EGN    F  LD ++K+ L          +  +  TG V    E            D   
Sbjct: 553 EGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELC 612

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI---- 176
           + A+++  C  G+I  AL  R++M+ +G   D++++  L++     G L + D ++    
Sbjct: 613 YTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLIS-----GALNQNDRILFELL 667

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           REM      P+   Y   I G+ +   L KA   +  M   G  PN VT+  LV+ L K 
Sbjct: 668 REMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKA 727

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A      +L    G+A  + IT    +D   K G+   AL L N M Q +   + 
Sbjct: 728 GYVNEAKLLFKRMLV---GEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSF-ANT 783

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YN+LI G+C  G    A      M+  G +PD ITY+T +   CK+G +D A   +  
Sbjct: 784 VTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWEC 843

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           + + G+ PD++ +  +I   C++G++ +A +    M+ + + P    ++ ++
Sbjct: 844 MLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLM 895



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 114/263 (43%)

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            +++LI  +  N  +         M   G LP+V T + LLN L +  K  +    +  L
Sbjct: 157 GFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTL 216

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
              GV PD   Y  +++ LC   D  KA+E +              +NV I+G  +   +
Sbjct: 217 VNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRV 276

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             A  ++  +   G+ +++ T+  L+L   R         +  EM+  G  P     + L
Sbjct: 277 WEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGL 336

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I     +G I  A +L +++ + G+ P++  Y  +I   C  G ++EAE +F+ +   GL
Sbjct: 337 IEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGL 396

Query: 538 AIDHIPFRILKKRYRRMKESDKA 560
             + + + IL   + R  + D A
Sbjct: 397 NPNDVTYTILIDGFGRRAKLDVA 419


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 208/452 (46%), Gaps = 31/452 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +VI  LC  G +  A  +  K+ + G  PD  T+  ++   C+  DL+ A  +   M E 
Sbjct: 233 SVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEE 292

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN ATY+  I G C    +++AL   S M  +G+ P   T    + ALC  G + DA
Sbjct: 293 GCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDA 352

Query: 243 VKFL--------------------GEVLA----------DDDGKATSDVITSTILMDSYF 272
            K                      G+ ++            DG    + +T   LM+   
Sbjct: 353 WKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDG-VVPNTVTYNALMNVLM 411

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           +N +   AL ++N M +     +  +YN LI G+C  GD   A +    MLK    P ++
Sbjct: 412 ENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLV 471

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TYN ++   C  G  D A     ++   G  PD+ SY  +I G C    +  A      M
Sbjct: 472 TYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEM 531

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +++ + P    +  +I GY +   L  A  + + M   G   NV T+N LI   T+  + 
Sbjct: 532 MDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNF 591

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             A  L K ML + I PDV TY+ +I   CN G I LAL+++++M++ G  P++ TY+ L
Sbjct: 592 SGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSL 651

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           I+     G ++EAEE+F++++  GL  D + +
Sbjct: 652 IQALGQEGRVEEAEEMFSELKKQGLIPDEVTY 683



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 195/386 (50%), Gaps = 6/386 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +++++G  P++L +N ++N LCK G++  A+ +I ++ +    P+  TY + I GYCR  
Sbjct: 218 QILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNR 277

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +LD A  +F+ M   G  PN  T++ L++ LC  G + +A+ F+ E+           V 
Sbjct: 278 DLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHG---VLPTVH 334

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T T  + +    G    A  ++ DM +K  + ++  Y  LI+G  ++     A   F +M
Sbjct: 335 TFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVS---RMAIGLFHRM 391

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            + G +P+ +TYN L+N L +  ++D A   + ++ K G  P+  SY  +I+G C  GD 
Sbjct: 392 SRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDT 451

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA   L +ML+    P    +N+II GY   GD   A  + +LM + G   + +++  L
Sbjct: 452 EKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTEL 511

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    +   +  A  +  EM+  G+ P+  TY  LI   C    +  A ++ + M R G 
Sbjct: 512 ISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGC 571

Query: 503 TPDIITYTELIKGHCARGNMKEAEEV 528
            P++ TY  LI G   + N   AEE+
Sbjct: 572 RPNVQTYNVLIHGLTKQNNFSGAEEL 597



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 194/434 (44%), Gaps = 37/434 (8%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E +   +  +I  LC  G++  AL    +M + G +P V T    +  LC +G +E A  
Sbjct: 295 EPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWK 354

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVN-------------------------------- 202
           +  +M +    PN  TY + I+G  RV+                                
Sbjct: 355 IFIDMKKKGCKPNVYTYTSLISGQ-RVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMEN 413

Query: 203 -ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            E+D AL +F+ M  +G  PN  ++N L+   C  G    A+  L  +L    G+ T  +
Sbjct: 414 MEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNML---KGRPTPTL 470

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T  I++  Y  +GD   A+ +   M     Q D  +Y  LI+GFC    +  A   F +
Sbjct: 471 VTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNE 530

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M+ RG  P+ +TY  L++  CK  KLD A+     + ++G  P+  +Y  +I GL    +
Sbjct: 531 MMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNN 590

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
              A E    MLE+ + P+   ++ +I+G    G +  A  + + M+  G   N+ T+++
Sbjct: 591 FSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSS 650

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI A  + G + +A  +  E+   G+ PD  TY  +I      G +  A     EM+  G
Sbjct: 651 LIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAG 710

Query: 502 ITPDIITYTELIKG 515
             P + TY  LIKG
Sbjct: 711 CQPTLQTYDVLIKG 724



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 192/424 (45%), Gaps = 16/424 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+  C  G    A+ +   M   G  PD  ++  L++  CKI  +E A  +  EM +  
Sbjct: 476 IIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRG 535

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY A I+GYC+  +LD A  +   M  +G RPN  T+N+L+H L K+     A 
Sbjct: 536 LCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 595

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +    +L +   K + DV+T + +++    NG    AL ++N M +     ++  Y+ LI
Sbjct: 596 ELCKVMLEE---KISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLI 652

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
                 G +  A   F ++ K+G +PD +TY  ++      GK+D A  F G +   G  
Sbjct: 653 QALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQ 712

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P   +Y  +I+GL    ++V  +   L     +   +  I N          D+ +  S 
Sbjct: 713 PTLQTYDVLIKGL--QNEMVYHKLVALPNAASTSTFDDQIIN---------KDVISVLSS 761

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
           +   L F +S  +  ++AL+   +R G  F+A +L + M+     P+  TY   + +   
Sbjct: 762 KLAELDFELSRQL--YDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLR 819

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              + LA+ ++  M  +     +  Y ELI   C     KEA  VF K+ +  L  D I 
Sbjct: 820 ALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIV 879

Query: 544 FRIL 547
           + IL
Sbjct: 880 WTIL 883



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 179/394 (45%), Gaps = 6/394 (1%)

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
           +++       ++ +A + +   S+  P     TY   +    ++N     +  +  +   
Sbjct: 163 HMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILRE 222

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G++PN + +N +++ALCK G + DA   + +V          D  T T ++  Y +N D 
Sbjct: 223 GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSG---MKPDTFTYTSMILGYCRNRDL 279

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             A  ++N M ++  + +   Y+ LING C +G ++ A  +  +M + G LP V T+   
Sbjct: 280 DSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAP 339

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +  LC  G++++A   +  + K G  P+  +Y ++I G  +    +        M    V
Sbjct: 340 IVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIG---LFHRMSRDGV 396

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           VP    +N +++      ++ +A  + ++M   G   N  ++N LI      G    A S
Sbjct: 397 VPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMS 456

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           +   ML     P + TYN++I   C+ G   +A+++ + M   G  PD  +YTELI G C
Sbjct: 457 MLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFC 516

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
               M+ A  +F ++   GL  + + +  L   Y
Sbjct: 517 KISKMELASGMFNEMMDRGLCPNEVTYTALISGY 550



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 130/297 (43%), Gaps = 16/297 (5%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   +  VI  LC  G I  AL +  KM++ G +P++ T++ L+  L + G +E+A+
Sbjct: 606 ISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAE 665

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  E+ +    P+  TY   I       ++D+A      M N G +P   T+++L+   
Sbjct: 666 EMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLI--- 722

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
             KGL  + V    +++A  +  +TS         D    N D    L+  + + + + +
Sbjct: 723 --KGLQNEMVYH--KLVALPNAASTST-------FDDQIINKDVISVLS--SKLAELDFE 769

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
                Y+ L++    +G    A   +  M+ +   P+  TY   L  L +  K+D A   
Sbjct: 770 LSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDV 829

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
           +  +S          YK +I  LC      +AR     ML +++  +  +W ++I+G
Sbjct: 830 FKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILING 886


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 217/431 (50%), Gaps = 9/431 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  G++  A  L  +M+ +G VP+ +T+ +L+  LC    +E+A    R M    
Sbjct: 248 IVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEA----RTMLGRV 303

Query: 184 PSPNCATYNAFITGYCRVN-ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           P  N   +N  I G C ++ +L +A  L+ TM + G  P+  T++IL+H LCK G LG A
Sbjct: 304 PELNVVLFNTVI-GRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSA 362

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K L E+  +D G A S ++T TIL+ S+ +NG      A+   M  K +  ++  YN +
Sbjct: 363 MKLLREM--EDKGFAPS-IVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGM 419

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I   C +  +  A  +  +M  +G+ PD+ TYNT++  LC   +++EA + +  L   GV
Sbjct: 420 ICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGV 479

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             + I+Y T+I  L  +G    A      M+      +   +N +I    R G++  +  
Sbjct: 480 VANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIM 539

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M   G+  N  ++N LI    +   + DA  L KEML   + PD+ TYN LI   C
Sbjct: 540 LLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLC 599

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            +G +H AL L +++    +  DIITY  LI  HC    + +A  +  +  T G+  +  
Sbjct: 600 KMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNER 659

Query: 543 PFRILKKRYRR 553
            + I+ + + R
Sbjct: 660 TWGIMVQNFVR 670



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 215/482 (44%), Gaps = 48/482 (9%)

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           R LC  G+   AL + R M + G VPD + +  +++ LC  G + +A  ++ EM  M  S
Sbjct: 180 RALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCS 239

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
            +  T+N  + G C +  L +A  L   M   G  PN +T+  L+  LC    + +A   
Sbjct: 240 ADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTM 299

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           LG V          +V+    ++     +G   +A  L+  M  K    D   Y++LI+G
Sbjct: 300 LGRV-------PELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHG 352

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG-------------------- 345
            C  G + SA     +M  +GF P ++TY  LL+  C+ G                    
Sbjct: 353 LCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMN 412

Query: 346 ---------------KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
                          ++D+A  F   +   G  PD  +Y TII  LC +  + +A     
Sbjct: 413 LEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFE 472

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
           ++L + VV     +N +I    R G   +A S+ + M+  G S ++ ++N LI A  R G
Sbjct: 473 NLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDG 532

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           ++  +  L  EM   GI P+  +YNLLI   C    +  AL+L  EML + +TPDI+TY 
Sbjct: 533 NVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYN 592

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            LI G C  G M  A  +  K+    +  D I + IL      +    KAR +H   +L 
Sbjct: 593 TLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNIL------ISWHCKARLLHDASMLL 646

Query: 571 NK 572
           N+
Sbjct: 647 NR 648



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 175/354 (49%), Gaps = 8/354 (2%)

Query: 90  LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
           LD  LKE  +  +TM   G        D   +  +I  LC  G++G+A+ L R+M  KG 
Sbjct: 320 LDGKLKEAAELYETMGSKG-----CPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGF 374

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P ++T+  L++  C+ G  +    ++  MS+   S N   YN  I   C+   +D A+ 
Sbjct: 375 APSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMR 434

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
               M + G +P+  T+N +++ LC    + +A ++L E L  +     ++ IT   L+ 
Sbjct: 435 FMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEA-EYLFENLLHEG--VVANAITYNTLIH 491

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
           +  +NG    A++L NDM       DIV+YN LI   C +G++  +     +M ++G  P
Sbjct: 492 ALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKP 551

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           + ++YN L++ LCK  ++ +A      +    + PD ++Y T+I GLC  G +  A   L
Sbjct: 552 NNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLL 611

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
             +  + V  +   +N++I  + +   L +A  + +  ++ G++ N  T+  ++
Sbjct: 612 EKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMV 665



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 173/378 (45%), Gaps = 7/378 (1%)

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R  P   T++      CR+   D+AL +  +MA +G  P+ V +  ++HALC +G + +A
Sbjct: 167 RVPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEA 226

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E+        ++DV T   ++      G   +A  L + M  +    + + Y  L
Sbjct: 227 ATLLDEMFL---MGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFL 283

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + G CL   +  A      ML R    +V+ +NT++      GKL EA+  Y  +   G 
Sbjct: 284 LKGLCLASQVEEART----MLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGC 339

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  +Y  +I GLC  G +  A + L  M +K   P    + +++  + R G   N  +
Sbjct: 340 PPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRA 399

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + ++M   G+S N+  +N +I A  +   + DA    +EM   G  PD+ TYN +I   C
Sbjct: 400 MLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLC 459

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           N   +  A  L++ +L  G+  + ITY  LI      G+ ++A  +   +   G ++D +
Sbjct: 460 NNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIV 519

Query: 543 PFRILKKRYRRMKESDKA 560
            +  L K   R    D++
Sbjct: 520 SYNGLIKALCRDGNVDRS 537



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 173/420 (41%), Gaps = 51/420 (12%)

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN-GIRPNRVT 225
            D E+A  ++  +   R  P      + +    R     +ALHL   + +   + P+  +
Sbjct: 82  ADPERALFLLESLPPSRVPP---LRESLLIPLFRSLAPGRALHLLDQLPHRFAVSPSFRS 138

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
           +N ++ A  +     D +     ++  D    T+   T +I   +  + G   +AL +  
Sbjct: 139 YNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTT--FTFSIAARALCRLGRADEALTMLR 196

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M +     D V Y  +I+  C  G ++ A     +M   G   DV T+N +++ LC  G
Sbjct: 197 SMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLG 256

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           +L EA+     +   G  P+ I+Y  +++GLC+   + +AR  L  + E +VV    ++N
Sbjct: 257 RLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVV----LFN 312

Query: 406 VIIDGYGRC---GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +I   GRC   G L  A  + + M S G   +  T++ LI    + G +  A  L +EM
Sbjct: 313 TVI---GRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREM 369

Query: 463 LLDGIFPDVFTYNLLIGASCNLG-----------------------------------HI 487
              G  P + TY +L+ + C  G                                    +
Sbjct: 370 EDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRM 429

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A++   EM  +G  PDI TY  +I   C    M+EAE +F  +   G+  + I +  L
Sbjct: 430 DDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTL 489



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 1/169 (0%)

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           +V P    +N ++  + R    ++  S+ R ++    V    FTF+    A  R G   +
Sbjct: 131 AVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADE 190

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A ++ + M   G  PD   Y  +I A C  G ++ A  L DEM   G + D+ T+ +++ 
Sbjct: 191 ALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVH 250

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           G C  G ++EA  +  ++   G   + I +  L K      + ++AR +
Sbjct: 251 GLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTM 299



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I +LC   ++  AL L ++M+ +   PD++T+N L+N LCK+G +  A +++ ++    
Sbjct: 559 LISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNED 618

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
              +  TYN  I+ +C+   L  A  L +    +GI PN  T  I+V    +K 
Sbjct: 619 VHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVRKS 672


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 214/437 (48%), Gaps = 37/437 (8%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D      +IR LC+ GKIG AL L  KMI +G  P+V+T+  L+N LCK+G+   A  
Sbjct: 136 QPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIR 195

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++R M +    P+   Y + I   C+  ++ +A +LFS M   GI P+  T+  L+H+LC
Sbjct: 196 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLC 255

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
                      L +++   + K   DV+  + ++D+  K G   +A  + + M  + ++ 
Sbjct: 256 NLCEWKHVTTLLNQMI---NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEP 312

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++V YN L++G CL  ++  A   F  M+  G+ P+VI+YNTL+N  CK  ++D+A++ +
Sbjct: 313 NVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLF 372

Query: 355 GVLSKTGVAPDQISYKTIIQG---------------LCIHGDIVKAREF----------- 388
             + +  + P+ ++Y T++                 +  HG I     +           
Sbjct: 373 EEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKS 432

Query: 389 -------LLSMLEKSVV-PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
                  LL  +E S + P+  I+ ++IDG  R G+L  A  I   + S G+  NV T+ 
Sbjct: 433 HLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYT 492

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            +I    R G + +A  L  EM  +G  PD  TYN +            A+QL  EML R
Sbjct: 493 IMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLAR 552

Query: 501 GITPDIITYTELIKGHC 517
           G + D+ T T L++  C
Sbjct: 553 GFSADVSTTTLLVEMLC 569



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 222/467 (47%), Gaps = 13/467 (2%)

Query: 71  WFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCL 130
           +FS+   +   +    FN LD    + L     M    P   T+  D+ R   ++  +  
Sbjct: 31  YFSSLSHNRFHSKSLNFNTLD----DALSSFNRMLHMHPPPSTV--DFNR---LLTSIAK 81

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
             +  T   L  +M   G  PDV T N L+N  C +  L  A  V+ ++ ++   P+ AT
Sbjct: 82  TKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTAT 141

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           +   I G C   ++  ALHLF  M   G +PN VT+  L++ LCK G    A++ L  + 
Sbjct: 142 FTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM- 200

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             + G    DV+  T ++DS  K+    +A  L++ M  + I  DI  Y  LI+  C   
Sbjct: 201 --EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLC 258

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           +         QM+    +PDV+ ++T+++ LCK+GK+ EA     ++   GV P+ ++Y 
Sbjct: 259 EWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYN 318

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            ++ G C+  ++ +A +   +M+     P    +N +I+GY +   +  A  + + M   
Sbjct: 319 ALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQK 378

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
            +  N  T+N L +     G + DA +L  EM+  G  PD+ TY +L+   C   H+  A
Sbjct: 379 ELIPNTVTYNTL-MHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEA 437

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           + L   +    + PDI  YT +I G C  G ++ A ++F+ + + GL
Sbjct: 438 MALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGL 484



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 200/427 (46%), Gaps = 4/427 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL    +M+     P  +  N L+  + K         +  +M      P+  T N  I 
Sbjct: 53  ALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILIN 112

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            +C +N L  A  + + +   G +P+  T   L+  LC +G +GDA+    +++ +    
Sbjct: 113 SFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG--- 169

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              +V+T   L++   K G+   A+ L   M Q N Q D+V Y  +I+  C +  ++ AF
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F +M+ +G  PD+ TY +L++ LC   +    +     +  + + PD + + T++  L
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G I +A + +  M+ + V P    +N ++DG+    ++  A  + D M+  G + NV
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 349

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            ++N LI    +   +  A  L +EM    + P+  TYN L+   C++G +  A+ L+ E
Sbjct: 350 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQDAIALFHE 408

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M+  G  PD+ TY  L+   C + ++ EA  +   I+   +  D   + I+     R  E
Sbjct: 409 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 557 SDKARDI 563
            + ARDI
Sbjct: 469 LEAARDI 475



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 5/155 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L E +  LKT+  +      ++ D + +  VI  +C  G++  A  +   +  KG  P+V
Sbjct: 434 LDEAMALLKTIEGSN-----MDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNV 488

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+  ++N LC+ G L++A+ +  EM     SP+  TYN    G  +  E  +A+ L   
Sbjct: 489 RTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQE 548

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
           M   G   +  T  +LV  LC   L     + L E
Sbjct: 549 MLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 583


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 217/441 (49%), Gaps = 6/441 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC+ G +  ALWL  KM   G   +  T+  LVN LCKIGD   A   +++M + 
Sbjct: 150 TIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKR 209

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK-GLLGD 241
              PN   YNA + G C+   + +AL L   M    + PN VT+N L+  LC + G   +
Sbjct: 210 NLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWRE 269

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
            V    E++A+       DV T +IL+D + K G   +A ++   M +  ++ ++V YN 
Sbjct: 270 GVGLFNEMVAEKG--IVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNS 327

Query: 302 LINGFCLNGDISSAFAYFCQMLKRG--FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           LI G+CL   +  A   F  M++ G   LP V+T+N+L++  CK  ++D+A      +  
Sbjct: 328 LIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVG 387

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ PD  ++ ++I G C     + ARE   +M E   VP      V++DG  +C   S 
Sbjct: 388 KGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSE 447

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A ++   M+  G+  ++  +N ++    + G + DA  L   +L+ G+  D +TYN++I 
Sbjct: 448 AVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIK 507

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C  G +  A +L  +M   G  P+  +Y   ++G   + ++  + +    ++  G  +
Sbjct: 508 GLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPV 567

Query: 540 DHIPFRILKKRYRRMKESDKA 560
           D     +L  R+    E DK+
Sbjct: 568 DATTAELL-IRFLSANEEDKS 587



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 201/419 (47%), Gaps = 7/419 (1%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           DV T N  +N LC +        V+  M+++   P   T N  + G C   +++ AL L 
Sbjct: 109 DVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLV 168

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M N G   N  T+  LV+ LCK G    A++ L +++  + G    +V+    ++D  
Sbjct: 169 EKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLG---PNVVVYNAILDGL 225

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN-GDISSAFAYFCQML-KRGFLP 329
            K G   +AL L ++M   N++ ++V YN LI G C   G        F +M+ ++G +P
Sbjct: 226 CKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVP 285

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA-REF 388
           DV T++ L++  CK+G L  A    G + + GV P+ ++Y ++I G C+   + +A R F
Sbjct: 286 DVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVF 345

Query: 389 LLSMLE-KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L + E +  +P     N +I G+ +  ++  A S+   M+  G+  +VFT+ +LI    
Sbjct: 346 GLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFC 405

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
                  A  L   M   G  P++ T  +++           A+ L+  M++ G+  DI+
Sbjct: 406 EVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIV 465

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            Y  ++ G C  G + +A ++ + +   GL ID   + I+ K   R    D A ++ +K
Sbjct: 466 IYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRK 524



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 5/281 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKG--TVPDVLTHNYLVNELCKIG 167
           VR  +E +   + ++I   CL  ++  A+ +   M+++G   +P V+THN L++  CK+ 
Sbjct: 314 VRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVK 373

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           +++KA  ++ EM      P+  T+ + I G+C V +   A  LF TM  +G  PN  T  
Sbjct: 374 EVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCA 433

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           +++  L K  L  +AV     ++         D++   I++D   K G    A  L + +
Sbjct: 434 VVLDGLLKCWLDSEAVTLFRAMMKSG---LDLDIVIYNIMLDGMCKMGKLNDARKLLSCV 490

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
             K ++ D   YN++I G C  G +  A     +M + G  P+  +YN  +  L ++  +
Sbjct: 491 LVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDI 550

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
             +  +  ++   G   D  + + +I+ L  + +    +EF
Sbjct: 551 ARSRKYLQIMKDKGFPVDATTAELLIRFLSANEEDKSFKEF 591



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 5/181 (2%)

Query: 58  SYVGDQCRSKT-----RHWFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVRC 112
           S +G  C  K        +F+ K+     N Q     LD +LK  LD          ++ 
Sbjct: 399 SLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKS 458

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
            L+ D   +  ++  +C  GK+  A  L   ++ KG   D  T+N ++  LC+ G L+ A
Sbjct: 459 GLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDA 518

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
           + ++R+M E    PN  +YN F+ G  R  ++ ++      M + G   +  T  +L+  
Sbjct: 519 EELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLIRF 578

Query: 233 L 233
           L
Sbjct: 579 L 579



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 23/102 (22%), Positives = 47/102 (46%)

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           DV T N+ I   C++    L   +   M + G+ P ++T   ++ G C  G++  A  + 
Sbjct: 109 DVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLV 168

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            K++ LG   +   +  L     ++ ++  A +  +K + RN
Sbjct: 169 EKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRN 210


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 233/507 (45%), Gaps = 86/507 (16%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D      +IR +C+ GKIG AL L  KMI +G  PDV+T+  L+N LCK+G+   A  
Sbjct: 128 QPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIR 187

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++  M +    PN   YN  I   C+  ++ +A +LFS M   GI P+  T+N L+HALC
Sbjct: 188 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 247

Query: 235 K-------KGLLGDAV--KFLGEVLADD--------DGKATS---------------DVI 262
                     LL + V  K + +V++ +        +GK T                +V+
Sbjct: 248 NLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVV 307

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY---- 318
           T T LMD +    +  +A+ +++ M  K    ++++YN LING+C    I  A  Y    
Sbjct: 308 TYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLM 367

Query: 319 ---------------FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
                          F  M+ +G +P+VI+YNTL+N  CK  ++D+A + +G + +  + 
Sbjct: 368 DXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELI 427

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y T+I GLC    +  A      M+  S +P    + +++D              
Sbjct: 428 PDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD-------------- 473

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
                   +  N +   A+ L +   GS  D              PD+   N+ I   C 
Sbjct: 474 -------YLCKNRYLAEAMALLKAIEGSNLD--------------PDIQVNNIAIDGMCR 512

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A  L+  +  +G+ PD+ TY+ +I G C RG + EA ++F ++   G  ++   
Sbjct: 513 AGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCI 572

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           +  + + + R  E+ +A  + Q+ + R
Sbjct: 573 YNTITRGFLRNNETSRAIQLLQEMVAR 599



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 200/441 (45%), Gaps = 62/441 (14%)

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
            T L L  +M   G  P++ T + L+N  C +  +  A  V+ ++ ++   P+ AT+   
Sbjct: 78  STLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTL 137

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           I G C   ++ +ALHLF  M   G RP+ VT+  L++ LCK G    A++ LG       
Sbjct: 138 IRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS------ 191

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
                                           M QKN Q ++ AYN +I+  C +  ++ 
Sbjct: 192 --------------------------------MVQKNCQPNVFAYNTIIDSLCKDRQVTE 219

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           AF  F +M+ +G  PD+ TYN+L++ LC   +    +     +  + + PD +S+ T++ 
Sbjct: 220 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 279

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
            LC  G + +A + +  M+++ V P    +  ++DG+    ++  A  + D M+  G   
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMP 339

Query: 435 NVFTFNALILAETRGGSI-------------------FDAFSLKKEMLLDGIFPDVFTYN 475
           NV ++N LI    +   I                    +A  +   M+  G  P+V +YN
Sbjct: 340 NVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYN 399

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            LI   C +  I  A+ L+ EM R+ + PD +TY+ LI G C    +++A  +F ++   
Sbjct: 400 TLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVAC 459

Query: 536 GLAIDHIPFRIL-----KKRY 551
               + + +RIL     K RY
Sbjct: 460 SQIPNLVTYRILLDYLCKNRY 480



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 197/397 (49%), Gaps = 22/397 (5%)

Query: 118 YRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR 177
           Y   +  + +LC    + T L    +M+    +PDV++ N +V+ LCK G + +A  V+ 
Sbjct: 239 YNSLIHALCNLCEWKHVATLL---NEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVD 295

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           +M +    PN  TY A + G+C ++E+D+A+ +F TM   G  PN +++N L++  CK  
Sbjct: 296 KMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQ 355

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            +  A+ +                   T LMD      +  +A+ +++ M  K    +++
Sbjct: 356 RIDKAIHY-------------------TXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVI 396

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
           +YN LING+C    I  A   F +M ++  +PD +TY+TL++ LC   +L +A   +  +
Sbjct: 397 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 456

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
                 P+ ++Y+ ++  LC +  + +A   L ++   ++ P+  + N+ IDG  R G+L
Sbjct: 457 VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGEL 516

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             A  +   + S G+  +V+T++ +I    R G + +A  L +EM  +G   +   YN +
Sbjct: 517 EAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTI 576

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
                       A+QL  EM+ RG + D  T T  +K
Sbjct: 577 TRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVK 613



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 181/426 (42%), Gaps = 57/426 (13%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           L+HN   ++      ++ A      M  M+P P+   +N  +T   ++      L L   
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M + GI PN  T +IL+++ C    +G A   L ++L                      K
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL----------------------K 124

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G                 Q D   +  LI G C+ G I  A   F +M+  GF PDV+T
Sbjct: 125 LGH----------------QPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVT 168

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y TL+N LCK G    A    G + +    P+  +Y TII  LC    + +A      M+
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            K + P+   +N +I       +  +  ++ + M+   +  +V +FN ++ A  + G + 
Sbjct: 229 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 288

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  +  +M+  G+ P+V TY  L+   C L  +  A++++D M+ +G  P++I+Y  LI
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI 348

Query: 514 KGHCARG-------------------NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
            G+C                      NM EA +VF  +   G   + I +  L   Y ++
Sbjct: 349 NGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKI 408

Query: 555 KESDKA 560
           +  DKA
Sbjct: 409 QRIDKA 414



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 178/370 (48%), Gaps = 34/370 (9%)

Query: 52  TLNDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAV-FNAL-DLILKENL-----DRLKTM 104
           T N ++  + + C  K      N+  D++  P  V FN + D + KE       D +  M
Sbjct: 238 TYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKM 297

Query: 105 RDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC 164
              G     +E +   + A++   CL  ++  A+ +   M+ KG +P+V+++N L+N  C
Sbjct: 298 IQRG-----VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYC 352

Query: 165 KIGDLEKADH-------------------VIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           KI  ++KA H                   V   M      PN  +YN  I GYC++  +D
Sbjct: 353 KIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 412

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           KA++LF  M    + P+ VT++ L+H LC    L DA+    E++A        +++T  
Sbjct: 413 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA---CSQIPNLVTYR 469

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           IL+D   KN    +A+AL   +   N+  DI   N+ I+G C  G++ +A   F  +  +
Sbjct: 470 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 529

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  PDV TY+ ++N LC++G LDEAS  +  + + G   +   Y TI +G   + +  +A
Sbjct: 530 GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRA 589

Query: 386 REFLLSMLEK 395
            + L  M+ +
Sbjct: 590 IQLLQEMVAR 599



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 98/185 (52%), Gaps = 3/185 (1%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L  D   +  +I  LC   ++  A+ L  +M+    +P+++T+  L++ LCK   L 
Sbjct: 423 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLA 482

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  +++ +      P+    N  I G CR  EL+ A  LFS +++ G++P+  T++I++
Sbjct: 483 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 542

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           + LC++GLL +A K   E+  D++G   +  I +TI    + +N +  +A+ L  +M  +
Sbjct: 543 NGLCRRGLLDEASKLFREM--DENGCTLNGCIYNTI-TRGFLRNNETSRAIQLLQEMVAR 599

Query: 291 NIQTD 295
               D
Sbjct: 600 GFSAD 604



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 113/291 (38%), Gaps = 35/291 (12%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A++ +N M +       V +N L+         S+  +   QM   G  P++ T + L+N
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C   ++  A      + K G  PD  ++ T+I+G+C+ G I                 
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKI----------------- 147

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
                               A  + D M+  G   +V T+  LI    + G+   A  L 
Sbjct: 148 ------------------GEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLL 189

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
             M+     P+VF YN +I + C    +  A  L+ EM+ +GI+PDI TY  LI   C  
Sbjct: 190 GSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL 249

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
              K    +  ++    +  D + F  +     +  +  +A D+  K + R
Sbjct: 250 CEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR 300



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 60/125 (48%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D + +   I  +C  G++  A  L   +  KG  PDV T++ ++N LC+ G L++A 
Sbjct: 496 LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEAS 555

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + REM E   + N   YN    G+ R NE  +A+ L   M   G   +  T  + V  L
Sbjct: 556 KLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 615

Query: 234 CKKGL 238
              GL
Sbjct: 616 SDDGL 620


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 212/430 (49%), Gaps = 5/430 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I  L   G +  A+ L  +M  +G  PDV+ +N L++   + GD  KA+
Sbjct: 180 LNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKAN 239

Query: 174 HVI-REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
            +  R ++E    P+  TYN  I G C++ +LD+++ +++ M  N   P+  T + ++H 
Sbjct: 240 EIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHG 299

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           L K G    A K   E++   +   + DV T   ++   F+ G   +   LWN M  KN 
Sbjct: 300 LSKAGNFNAAEKVFQEMI---ESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM-SKNN 355

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             +IV+YN+LI G   N  +  A  Y+  + +RG   D  TY  L+N LCK G L++A  
Sbjct: 356 CCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALR 415

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
                   G   D  +Y +++ GLC  G + +A E +  M +       H++N +I+GY 
Sbjct: 416 ILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYV 475

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           R   L  A S+   M S   +  V ++N +I    +     DA+   KEML +G+ PD+ 
Sbjct: 476 RAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMI 535

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY+LLI   C    + +AL L+ + + + + PD+  +  +I G C    +  A E+F ++
Sbjct: 536 TYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQM 595

Query: 533 QTLGLAIDHI 542
           + +    D +
Sbjct: 596 RQVNCVPDLV 605



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 194/426 (45%), Gaps = 37/426 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  GK+  ++ +  +M +    PD+ T + +++ L K G+   A+ V +EM E  
Sbjct: 261 MINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESG 320

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANN-------------------------- 217
            SP+  TYNA ++G  R  +L+K   L++ M+ N                          
Sbjct: 321 LSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAIC 380

Query: 218 --------GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
                   G++ +  T+ +L++ LCK G L  A++ L E  A+++G A  D    + ++ 
Sbjct: 381 YWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEE--AENEG-ADLDTFAYSSMVH 437

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K G   QA+ L + M +   + +   +N LING+     +  A +   +M  +   P
Sbjct: 438 GLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAP 497

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
            V++YNT++N LCK  +  +A      + + G+ PD I+Y  +I GLC    +  A    
Sbjct: 498 TVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLW 557

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
              + K + P+  + N+II G      +  A  I   M       ++ T N ++    + 
Sbjct: 558 HQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKA 617

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G   +A  +   +L  G+ PD+ +YN+     C+   +  A++   + L RGI P+  T+
Sbjct: 618 GDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTW 677

Query: 510 TELIKG 515
             L++ 
Sbjct: 678 NVLVRA 683



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 174/350 (49%), Gaps = 5/350 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           +P   ++N+ +  +   N+  +A   F+     G+ PN  T+NIL+   CKK        
Sbjct: 111 NPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKG 170

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L  +    +     D+++   L+++  K+G+   A+ L+++M  + +  D++ YN+LI+
Sbjct: 171 LLTWMF---ENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILID 227

Query: 305 GFCLNGDISSAFAYFCQML-KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           GF   GD   A   + ++L +    P V TYN ++N LCK GKLDE+   +  + K   +
Sbjct: 228 GFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKS 287

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  ++ ++I GL   G+   A +    M+E  + P+   +N ++ G  R G L+  F +
Sbjct: 288 PDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFEL 347

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            ++M S     N+ ++N LI        +  A    + +   G+  D  TY LLI   C 
Sbjct: 348 WNVM-SKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCK 406

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            G+++ AL++ +E    G   D   Y+ ++ G C +G +++A E+  +++
Sbjct: 407 NGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMK 456



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 187/396 (47%), Gaps = 20/396 (5%)

Query: 87  FNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTA--LWLRRKM 144
           FNA + + +E       M ++G     L  D R + A++  L   GK+     LW    +
Sbjct: 306 FNAAEKVFQE-------MIESG-----LSPDVRTYNAMLSGLFRTGKLNKCFELW---NV 350

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           + K    +++++N L+  L     +E+A    + + E     +  TY   I G C+   L
Sbjct: 351 MSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYL 410

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           +KAL +     N G   +   ++ +VH LCKKG+L  AV+ + + +  +  K  S V  S
Sbjct: 411 NKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQ-MKKNRRKLNSHVFNS 469

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
             L++ Y +     +A+++  +M  K+    +V+YN +ING C     S A+    +ML+
Sbjct: 470 --LINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLE 527

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G  PD+ITY+ L++ LC+  K+D A + +       + PD   +  II GLC    +  
Sbjct: 528 EGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDV 587

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A E    M + + VP+    N I++G  + GD   A  I D +L  G+  ++ ++N    
Sbjct: 588 ALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFK 647

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
                  + DA     + L  GI P+  T+N+L+ A
Sbjct: 648 GLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRA 683



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 194/481 (40%), Gaps = 77/481 (16%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDL 169
           RCT   D    ++ I+          AL L + M+   G  P + + N ++N   +    
Sbjct: 73  RCTCSEDVA--LSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQW 130

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A+           SPN  TYN  I   C+  + +K   L + M  NG+ P+ +++  L
Sbjct: 131 REAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTL 190

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF- 288
           ++AL K G L DAV+   E+          DV+   IL+D + + GD  +A  +W  +  
Sbjct: 191 INALAKSGNLLDAVELFDEMSVRG---VNPDVMCYNILIDGFLRKGDFVKANEIWKRLLT 247

Query: 289 QKNIQTDIVAYNVLINGFC-----------------------------------LNGDIS 313
           + ++   +  YN++ING C                                     G+ +
Sbjct: 248 ESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFN 307

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT------------- 360
           +A   F +M++ G  PDV TYN +L+ L + GKL++    + V+SK              
Sbjct: 308 AAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQ 367

Query: 361 ---------------------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
                                G+  D  +Y  +I GLC +G + KA   L     +    
Sbjct: 368 GLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADL 427

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   ++ ++ G  + G L  A  +   M       N   FN+LI    R   + +A S+ 
Sbjct: 428 DTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVL 487

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           +EM      P V +YN +I   C       A     EML  G+ PD+ITY+ LI G C R
Sbjct: 488 REMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLC-R 546

Query: 520 G 520
           G
Sbjct: 547 G 547



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 195/419 (46%), Gaps = 4/419 (0%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P++ T+N L+   CK    EK   ++  M E   +P+  +Y   I    +   L  A
Sbjct: 144 GMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDA 203

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + LF  M+  G+ P+ + +NIL+    +KG    A +    +L +        V T  I+
Sbjct: 204 VELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTE--SSVYPSVETYNIM 261

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           ++   K G   +++ +WN M +     D+  ++ +I+G    G+ ++A   F +M++ G 
Sbjct: 262 INGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGL 321

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PDV TYN +L+ L + GKL++    + V+SK     + +SY  +IQGL  +  + +A  
Sbjct: 322 SPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-NIVSYNMLIQGLLDNKKVEQAIC 380

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
           +   + E+ +  +   + ++I+G  + G L+ A  I +   + G   + F +++++    
Sbjct: 381 YWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLC 440

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G +  A  L  +M  +    +   +N LI        +  A+ +  EM  +   P ++
Sbjct: 441 KKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVV 500

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI-HQ 565
           +Y  +I G C      +A     ++   GL  D I + +L     R ++ D A ++ HQ
Sbjct: 501 SYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQ 559



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 112/217 (51%), Gaps = 3/217 (1%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K+  A+ + R+M  K   P V+++N ++N LCK      A   ++EM E    P+  TY+
Sbjct: 479 KLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYS 538

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I G CR  ++D AL+L+    N  ++P+   HNI++H LC    +  A++   ++   
Sbjct: 539 LLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQV 598

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
           +      D++T   +M+  +K GD  +AL +W+ + +  +Q DI++YN+   G C    +
Sbjct: 599 N---CVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARV 655

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           S A  +    L RG LP+  T+N L+  +     L E
Sbjct: 656 SDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLME 692



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 40/299 (13%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  +I  LC  G +  AL +  +   +G   D   ++ +V+ LCK G LE+A 
Sbjct: 390 LKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAV 449

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +I +M + R   N   +N+ I GY R  +L++A+ +   M +    P  V++N +++ L
Sbjct: 450 ELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGL 509

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK     DA   L E+L +       D+IT ++L+D   +      AL LW+    K ++
Sbjct: 510 CKAERFSDAYLSLKEMLEEG---LKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLK 566

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQM------------------------------- 322
            D+  +N++I+G C    +  A   F QM                               
Sbjct: 567 PDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKI 626

Query: 323 ----LKRGFLPDVITYNTLLNCLCKQGKLDEASHF-YGVLSKTGVAPDQISYKTIIQGL 376
               L+ G  PD+I+YN     LC   ++ +A  F Y  L + G+ P+  ++  +++ +
Sbjct: 627 WDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDR-GILPNAPTWNVLVRAV 684



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 134/274 (48%), Gaps = 4/274 (1%)

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNGDISSAF 316
           + DV  S I   +Y K     QAL L+ +M         I ++N ++N F  +     A 
Sbjct: 77  SEDVALSAI--KAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAE 134

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            +F      G  P++ TYN L+   CK+ + ++       + + G+ PD +SY T+I  L
Sbjct: 135 LFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINAL 194

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSN 435
              G+++ A E    M  + V P+   +N++IDG+ R GD   A  I + L+    V  +
Sbjct: 195 AKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPS 254

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           V T+N +I    + G + ++  +   M  +   PD+FT++ +I      G+ + A +++ 
Sbjct: 255 VETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQ 314

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           EM+  G++PD+ TY  ++ G    G + +  E++
Sbjct: 315 EMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELW 348



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 1/162 (0%)

Query: 408 IDGYGRCGDLSNAFSIRDLMLS-FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           I  Y +C     A ++   M+  FG +  + +FN+++ A        +A          G
Sbjct: 85  IKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAG 144

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           + P++ TYN+LI  SC          L   M   G+ PDI++Y  LI      GN+ +A 
Sbjct: 145 MSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAV 204

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           E+F ++   G+  D + + IL   + R  +  KA +I ++ L
Sbjct: 205 ELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLL 246


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 205/434 (47%), Gaps = 3/434 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D R +  ++  L    K+         M+++    DV T N L+  LCK   +  A 
Sbjct: 164 IKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAI 223

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM     SP+  T+   + GY     LD AL +   M   G     VT N+L++  
Sbjct: 224 LMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGF 283

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G +  A+ F+ E +++       D  T   L++   K G    A+ + + M    + 
Sbjct: 284 CKQGRIDQALSFIQEAVSEG---FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLD 340

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DI  YN LI+G C  G+I  A     QM+ R   P+ +TYN +++ LCK+ ++DEA+  
Sbjct: 341 PDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEI 400

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             +L+  G+ PD  ++ ++IQGLC+  +   A +    M  K   P+   +N++ID    
Sbjct: 401 ARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCS 460

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              L  A ++   M   G + NV  +N LI    +   I +A  +  EM L G+  D  T
Sbjct: 461 SRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVT 520

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN LI   C    +  A QL D+M+  G+ PD  TY  L+   C  G++K+A ++   + 
Sbjct: 521 YNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMT 580

Query: 534 TLGLAIDHIPFRIL 547
           + G   D + +  L
Sbjct: 581 SSGCNPDIVTYATL 594



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 215/473 (45%), Gaps = 4/473 (0%)

Query: 90  LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
           L++++  N  +L     +  VR  +  D      +I+ LC   ++  A+ +  +M   G 
Sbjct: 175 LNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGL 234

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            PD  T   ++    + G+L+ A  +  +M E        T N  I G+C+   +D+AL 
Sbjct: 235 SPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALS 294

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
                 + G RP++ T+N LV+ LCK G    A++ +  +L    G    D+ T   L+ 
Sbjct: 295 FIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLL---GGLDPDIYTYNSLIS 351

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K G+  +A+ + + M  ++   + V YN +I+  C    +  A      +  +G LP
Sbjct: 352 GLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILP 411

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           DV T+N+L+  LC       A   +  +   G  PD+ +Y  +I  LC    + +A   L
Sbjct: 412 DVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLL 471

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M          I+N +IDG+ +   +  A  I D M   GVS +  T+N LI    + 
Sbjct: 472 KEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKS 531

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             + DA  L  +M+++G+ PD FTYN L+   C  G I  A  +   M   G  PDI+TY
Sbjct: 532 KRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTY 591

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAI-DHIPFRILKKRYRRMKESDKAR 561
             LI G C  G ++ A  +   IQ  G+ +  H    +++  ++R +  +  R
Sbjct: 592 ATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMR 644



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 198/397 (49%), Gaps = 3/397 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G+I  AL   ++ + +G  PD  T+N LVN LCKIG  + A  V+  M    
Sbjct: 279 LINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGG 338

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYN+ I+G C++ E+++A+ +   M +    PN VT+N ++ +LCK+  + +A 
Sbjct: 339 LDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEAT 398

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + +  +L         DV T   L+     + +   A+ L+ +M  K  + D   YN+LI
Sbjct: 399 E-IARLLTSKG--ILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLI 455

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C +  +  A     +M   G   +V+ YNTL++  CK  +++EA   +  +   GV+
Sbjct: 456 DSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVS 515

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D ++Y T+I GLC    +  A + +  M+ + + P+   +N ++  + + GD+  A  I
Sbjct: 516 RDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADI 575

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M S G + ++ T+  LI    + G +  A  L + + + G+      YN +I A   
Sbjct: 576 VQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFK 635

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
               H A++L+ EML +   PD ITY  + +G C  G
Sbjct: 636 RNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGG 672



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 207/436 (47%), Gaps = 3/436 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D      +++    GG +  AL ++ +M++ G     +T N L+N  CK G +++A 
Sbjct: 234 LSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQAL 293

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             I+E       P+  TYN  + G C++     A+ +   M   G+ P+  T+N L+  L
Sbjct: 294 SFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGL 353

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G + +AVK L ++++ D    + + +T   ++ S  K     +A  +   +  K I 
Sbjct: 354 CKLGEIEEAVKILDQMVSRD---CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGIL 410

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+  +N LI G CL+ +  SA   F +M  +G  PD  TYN L++ LC   KL+EA + 
Sbjct: 411 PDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNL 470

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G A + + Y T+I G C +  I +A E    M  + V  +   +N +IDG  +
Sbjct: 471 LKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCK 530

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              + +A  + D M+  G+  + FT+N+L+    + G I  A  + + M   G  PD+ T
Sbjct: 531 SKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVT 590

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  LI   C  G + +A +L   +  +G+      Y  +I+    R    EA  +F ++ 
Sbjct: 591 YATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREML 650

Query: 534 TLGLAIDHIPFRILKK 549
                 D I ++I+ +
Sbjct: 651 DKSEPPDAITYKIVYR 666



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 196/420 (46%), Gaps = 7/420 (1%)

Query: 132 GKIGTALWLRR---KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS-EMRPSPN 187
           GK G+  ++RR   +M   G   D       V    K    ++   +++ M  E R  P+
Sbjct: 108 GKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPD 167

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
              YN  +      N+L       S+M    IR +  T NIL+ ALCK   +  A+  + 
Sbjct: 168 TRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMME 227

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E+ +      + D  T T +M  Y + G+   AL +   M +       V  NVLINGFC
Sbjct: 228 EMPSYG---LSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFC 284

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G I  A ++  + +  GF PD  TYNTL+N LCK G    A      +   G+ PD  
Sbjct: 285 KQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIY 344

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y ++I GLC  G+I +A + L  M+ +   P    +N II    +   +  A  I  L+
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
            S G+  +V TFN+LI       +   A  L +EM   G  PD FTYN+LI + C+   +
Sbjct: 405 TSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKL 464

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             AL L  EM   G   +++ Y  LI G C    ++EAEE+F +++  G++ D + +  L
Sbjct: 465 EEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTL 524



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 193/398 (48%), Gaps = 6/398 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC  G    A+ +   M+  G  PD+ T+N L++ LCK+G++E+A  ++ +M   
Sbjct: 313 TLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSR 372

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SPN  TYNA I+  C+ N +D+A  +   + + GI P+  T N L+  LC       A
Sbjct: 373 DCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSA 432

Query: 243 VKFLGEVLADDDGKAT-SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           +    E+     GK    D  T  +L+DS   +    +AL L  +M       ++V YN 
Sbjct: 433 MDLFEEM----KGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNT 488

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LI+GFC N  I  A   F +M  +G   D +TYNTL++ LCK  ++++A+     +   G
Sbjct: 489 LIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEG 548

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD+ +Y +++   C  GDI KA + + +M      P+   +  +I G  + G +  A 
Sbjct: 549 LRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVAS 608

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   +   G+      +N +I A  +     +A  L +EML     PD  TY ++    
Sbjct: 609 RLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGL 668

Query: 482 CNLG-HIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
           CN G  I  A+    EM+ RG  P+  ++  L +G C 
Sbjct: 669 CNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCT 706



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 192/389 (49%), Gaps = 4/389 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   + ++I  LC  G+I  A+ +  +M+ +   P+ +T+N +++ LCK   +++A 
Sbjct: 339 LDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEAT 398

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + R ++     P+  T+N+ I G C  +    A+ LF  M   G RP+  T+N+L+ +L
Sbjct: 399 EIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSL 458

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C    L +A+  L E+  + +G A + VI +T L+D + KN    +A  ++++M  + + 
Sbjct: 459 CSSRKLEEALNLLKEM--ELNGCARNVVIYNT-LIDGFCKNKRIEEAEEIFDEMELQGVS 515

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D V YN LI+G C +  +  A     QM+  G  PD  TYN+LL   CK G + +A+  
Sbjct: 516 RDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADI 575

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              ++ +G  PD ++Y T+I GLC  G +  A   L S+  K +V  PH +N +I    +
Sbjct: 576 VQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFK 635

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS-IFDAFSLKKEMLLDGIFPDVF 472
                 A  +   ML      +  T+  +      GG  I +A     EM+  G  P+  
Sbjct: 636 RNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFS 695

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           ++ +L    C L      ++L D ++ + 
Sbjct: 696 SFVMLAEGLCTLSMDDTLVKLVDMIMEKA 724



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 197/415 (47%), Gaps = 3/415 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD   +N L+N L     L+  +     M   R   + +T+N  I   C+ +++  A+ +
Sbjct: 166 PDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILM 225

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M + G+ P+  T   ++    + G L  A++   +++  + G   +DV T  +L++ 
Sbjct: 226 MEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMV--EYGCPCTDV-TVNVLING 282

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + K G   QAL+   +   +  + D   YN L+NG C  G    A      ML  G  PD
Sbjct: 283 FCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPD 342

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           + TYN+L++ LCK G+++EA      +     +P+ ++Y  II  LC    + +A E   
Sbjct: 343 IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR 402

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            +  K ++P+   +N +I G     +  +A  + + M   G   + FT+N LI +     
Sbjct: 403 LLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSR 462

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A +L KEM L+G   +V  YN LI   C    I  A +++DEM  +G++ D +TY 
Sbjct: 463 KLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYN 522

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            LI G C    +++A ++  ++   GL  D   +  L   + +  +  KA DI Q
Sbjct: 523 TLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQ 577



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 195/426 (45%), Gaps = 4/426 (0%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           Q   VP    +  ++ +L K G  E    V+ EM       +   +  F+  Y +    D
Sbjct: 90  QPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYD 149

Query: 206 KALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           + + +   M +   I+P+   +N+L++ L     L         ++     +   DV T 
Sbjct: 150 EVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRR---RIRHDVSTF 206

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
            IL+ +  K      A+ +  +M    +  D   +  ++ G+   G++  A     QM++
Sbjct: 207 NILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVE 266

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G     +T N L+N  CKQG++D+A  F       G  PDQ +Y T++ GLC  G    
Sbjct: 267 YGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKH 326

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A E + +ML   + P+ + +N +I G  + G++  A  I D M+S   S N  T+NA+I 
Sbjct: 327 AMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIIS 386

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           +  +   + +A  + + +   GI PDV T+N LI   C   +   A+ L++EM  +G  P
Sbjct: 387 SLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRP 446

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
           D  TY  LI   C+   ++EA  +  +++  G A + + +  L   + + K  ++A +I 
Sbjct: 447 DEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIF 506

Query: 565 QKWLLR 570
            +  L+
Sbjct: 507 DEMELQ 512



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 91/210 (43%)

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD   Y  ++  L     +        SM+ + +  +   +N++I    +   +  A 
Sbjct: 164 IKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAI 223

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + + M S+G+S +  TF  ++     GG++  A  +K++M+  G      T N+LI   
Sbjct: 224 LMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGF 283

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C  G I  AL    E +  G  PD  TY  L+ G C  G+ K A EV   +   GL  D 
Sbjct: 284 CKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDI 343

Query: 542 IPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             +  L     ++ E ++A  I  + + R+
Sbjct: 344 YTYNSLISGLCKLGEIEEAVKILDQMVSRD 373



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 6/158 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           +K+  D ++TM  +G        D   +  +I  LC  G++  A  L R +  KG V   
Sbjct: 569 IKKAADIVQTMTSSG-----CNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTP 623

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCR-VNELDKALHLFS 212
             +N ++  L K     +A  + REM +    P+  TY     G C     + +A+    
Sbjct: 624 HAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTV 683

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
            M   G  P   +  +L   LC   +    VK +  ++
Sbjct: 684 EMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIM 721


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 208/450 (46%), Gaps = 38/450 (8%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           ++  +L L  +M+ +G   D++ +  +++ L K G +E+A  V+R       +PNC TY 
Sbjct: 344 RVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYT 403

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             +  +CR   +D A  +   M    + PN VT + +++ L K+G +  A  ++ ++   
Sbjct: 404 VLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKM--K 461

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
           D G A  +V+T   L+D +FK   +  AL ++ DM  + ++ +    + L+NG   NG+I
Sbjct: 462 DSGIA-PNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNI 520

Query: 313 SSAFAYFCQMLKRGFL-----------------------------------PDVITYNTL 337
             A A F  M +RG L                                   PD + YN  
Sbjct: 521 EEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVF 580

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +NCLC+ GK  EA  F   +  TG+ PDQ +Y T+I   C  G+  KA + L  M   S+
Sbjct: 581 INCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSI 640

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P    +  ++ G    G +  A  + + M S G +    T+  ++ A +   S +    
Sbjct: 641 KPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILE 700

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           + + M+  G+  D+  YN L+   C  G    A  + DEML RGI PD IT+  LI GHC
Sbjct: 701 VHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHC 760

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
              ++  A   +A++   GL+ +   F  L
Sbjct: 761 KSSHLDNAFATYAQMLHQGLSPNIATFNTL 790



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 218/432 (50%), Gaps = 3/432 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E     H  +I + C   +I  A  L   M++ G +PDV+T + LV+ LC+ G   +A 
Sbjct: 255 VEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAY 314

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + REM ++  +PN  TY  FI    +V  ++++L L   M + G+  + V +  ++  L
Sbjct: 315 ALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRL 374

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K+G + +A   L   L+D+    T + +T T+L+D++ + G+   A  +   M +K++ 
Sbjct: 375 GKEGKIEEAKDVLRHALSDN---ITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVS 431

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++V ++ ++NG    G I+ A  Y  +M   G  P+V+TY TL++   K    + A   
Sbjct: 432 PNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDV 491

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  +   GV  +     +++ GL  +G+I +A      M E+ ++ +   +  ++DG  +
Sbjct: 492 YRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFK 551

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G++  A  +   ++   +S +   +N  I    R G   +A S  KEM   G+ PD  T
Sbjct: 552 TGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQAT 611

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN +I A C  G+   AL+L +EM    I P++ITYT L+ G    G +++A+ +  ++ 
Sbjct: 612 YNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMA 671

Query: 534 TLGLAIDHIPFR 545
           + G     + +R
Sbjct: 672 SAGFTPTPLTYR 683



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 219/505 (43%), Gaps = 77/505 (15%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G I  A  +  +M +K   P+V+T + ++N L K G + KA   +R+M +   +PN 
Sbjct: 410 CRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNV 469

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TY   I G+ +    + AL ++  M + G+  N    + LV+ L K G + +A     E
Sbjct: 470 VTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEA-----E 524

Query: 249 VLADDDGKATS--DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            L  D G+     D +    LMD  FK G+   AL +  ++ ++N+  D V YNV IN  
Sbjct: 525 ALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCL 584

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC-------------------------- 340
           C  G  S A ++  +M   G  PD  TYNT+++                           
Sbjct: 585 CRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNL 644

Query: 341 ---------LCKQGKLDEASHFYGVLSKTGVAPDQISYK--------------------- 370
                    L + G +++A +    ++  G  P  ++Y+                     
Sbjct: 645 ITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHEL 704

Query: 371 --------------TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
                         T++  LC HG   KA   L  ML + + P+   +N +I G+ +   
Sbjct: 705 MMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSH 764

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L NAF+    ML  G+S N+ TFN L+      G I +A ++  EM   G+ P+  TY++
Sbjct: 765 LDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDI 824

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L+       +   AL+LY EM+ +G  P   TY  LI      G M +A+E+F++++  G
Sbjct: 825 LVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRG 884

Query: 537 LAIDHIPFRILKKRYRRMKESDKAR 561
           +      + IL   + +++   + R
Sbjct: 885 VLHTSSTYDILLNGWSKLRNGTEVR 909



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 202/447 (45%), Gaps = 5/447 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C    +  AL +  +M  +G   DV+ +N LV      GD + A  V   M   
Sbjct: 194 ALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKAD 253

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  T+   I  YC++  +++A  L+  M  +G+ P+ VT + LV  LC+ G   +A
Sbjct: 254 GVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEA 313

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+  D  G A + V   T + DS  K     ++L L  +M  + +  D+V Y  +
Sbjct: 314 YALFREM--DKIGVAPNHVTYCTFI-DSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTV 370

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++     G I  A       L     P+ +TY  L++  C+ G +D A      + +  V
Sbjct: 371 MDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSV 430

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           +P+ +++ +I+ GL   G I KA  ++  M +  + P    +  +IDG+ +C     A  
Sbjct: 431 SPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALD 490

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   ML  GV +N F  ++L+    + G+I +A +L K+M   G+  D   Y  L+    
Sbjct: 491 VYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLF 550

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G++  AL++  E++ R ++PD + Y   I   C  G   EA+    +++  GL  D  
Sbjct: 551 KTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQA 610

Query: 543 PFRILKKRYRRMKESDKARDI--HQKW 567
            +  +     R   + KA  +    KW
Sbjct: 611 TYNTMISAQCREGNTSKALKLLNEMKW 637



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 204/422 (48%), Gaps = 4/422 (0%)

Query: 150 VP-DVLTHNYLVNELCKIGDLEKADHVIREMSEMRP--SPNCATYNAFITGYCRVNELDK 206
           VP D LT N ++   C +  L  A  ++R  S  +P  + +  +YN F+ G         
Sbjct: 76  VPGDPLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRL 135

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A  + S M   G+  + VT +  +  L + GL+G+A   L E+L    G     V+    
Sbjct: 136 APPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAA-LAEMLVRGRGIDGLGVVGWNA 194

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+D Y K  D   ALA+   M  + +  D+V YN L+ GF  +GD  +A+    +M   G
Sbjct: 195 LIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADG 254

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P V+T+ TL+   CK  +++EA   Y  + ++GV PD ++   ++ GLC  G   +A 
Sbjct: 255 VEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAY 314

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
                M +  V P    +   ID   +   ++ +  +   M+S GV+ ++  +  ++   
Sbjct: 315 ALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRL 374

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G I +A  + +  L D I P+  TY +L+ A C  G+I  A Q+  +M  + ++P++
Sbjct: 375 GKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNV 434

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +T++ ++ G   RG + +A     K++  G+A + + +  L   + + +  + A D+++ 
Sbjct: 435 VTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRD 494

Query: 567 WL 568
            L
Sbjct: 495 ML 496



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 181/381 (47%), Gaps = 3/381 (0%)

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           +NA I GYC+V ++  AL +   M   G+  + V +N LV      G   DA   + E +
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGD-ADAAWEVAERM 250

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             D       V+T T L+  Y K     +A  L+  M +  +  D+V  + L++G C +G
Sbjct: 251 KADG--VEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDG 308

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
             S A+A F +M K G  P+ +TY T ++ L K  +++E+    G +   GVA D + Y 
Sbjct: 309 RFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYT 368

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T++  L   G I +A++ L   L  ++ P    + V++D + R G++  A  +   M   
Sbjct: 369 TVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEK 428

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
            VS NV TF++++    + G I  A    ++M   GI P+V TY  LI           A
Sbjct: 429 SVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAA 488

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L +Y +ML  G+  +      L+ G    GN++EAE +F  +   GL +DH+ +  L   
Sbjct: 489 LDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDG 548

Query: 551 YRRMKESDKARDIHQKWLLRN 571
             +      A  + Q+ + RN
Sbjct: 549 LFKTGNMPAALKVGQELMERN 569



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 136/357 (38%), Gaps = 53/357 (14%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           LK MR+TG     LE D   +  +I   C  G    AL L  +M      P+++T+  LV
Sbjct: 597 LKEMRNTG-----LEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLV 651

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
             L + G +EKA +++ EM+    +P   TY   +            L +   M   G+ 
Sbjct: 652 VGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLH 711

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
            +   +N LVH LC  G+   A   L E+L         D IT   L+  + K+     A
Sbjct: 712 ADITVYNTLVHVLCCHGMTRKATIVLDEMLGRG---IAPDTITFNALILGHCKSSHLDNA 768

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA------------------------- 315
            A +  M  + +  +I  +N L+ G    G I  A                         
Sbjct: 769 FATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTG 828

Query: 316 ----------FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
                        +C+M+ +GF+P   TYN+L++   K G +++A   +  + + GV   
Sbjct: 829 YAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHT 888

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             +Y  ++ G     +  + R  L  M E    P            G    +S AFS
Sbjct: 889 SSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSK----------GTISSMSRAFS 935



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 108/281 (38%), Gaps = 38/281 (13%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  ++  LC  G    A  +  +M+ +G  PD +T N L+   CK   L+ A 
Sbjct: 710 LHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAF 769

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
               +M     SPN AT+N  + G      + +A  +   M   G+ PN +T++ILV   
Sbjct: 770 ATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILV--- 826

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
                                                Y K  +K +AL L+ +M  K   
Sbjct: 827 -----------------------------------TGYAKKSNKVEALRLYCEMVSKGFI 851

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
                YN LI+ F   G ++ A   F +M +RG L    TY+ LLN   K     E    
Sbjct: 852 PKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRIL 911

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
              + + G  P + +  ++ +     G   +AR  L ++ +
Sbjct: 912 LKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFK 952


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/371 (31%), Positives = 188/371 (50%), Gaps = 3/371 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  L   G+  T   +   M+ +G  P+V+T+  L++  C+ GD  KA  +  EM E +
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P    Y   I G C  + + +A  +F TM N+G+ PN  T+N ++   CK   +  A+
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+L D       +V+T  IL+D   K  +   A     DM    +  +I  YN LI
Sbjct: 284 ELYQEMLGDG---LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+C  G++S A +   ++ K   LPDV TY+ L+  LC   +++EA      + K G  
Sbjct: 341 DGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y T+I G C  G++ KA E    M EK + P    ++ +IDGY + G +  A  +
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+  G+  +V  + ALI    + G+  +AF L KEM   G+ P+VFT + LI   C 
Sbjct: 461 YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520

Query: 484 LGHIHLALQLY 494
            G I  A++L+
Sbjct: 521 DGRISDAIKLF 531



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 189/398 (47%), Gaps = 6/398 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  ALW+  KM     +P +   N +++ L K G  +    V  +M     SPN  TY
Sbjct: 140 GLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTY 196

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I G CR  +  KA  LF  M    I P  V + IL+  LC +  + +A      +  
Sbjct: 197 GTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM-- 254

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     ++ T   +MD Y K     +AL L+ +M    +  ++V + +LI+G C   +
Sbjct: 255 -RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDE 313

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           + SA  +   M   G +P++  YN L++  CK G L EA   +  + K  + PD  +Y  
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSI 373

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I+GLC    + +A   L  M +K  +P    +N +IDGY + G++  A  +   M   G
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N+ TF+ LI    + G +  A  L  EM++ G+ PDV  Y  LI      G+   A 
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +L+ EM   G+ P++ T + LI G C  G + +A ++F
Sbjct: 494 RLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 205/393 (52%), Gaps = 8/393 (2%)

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           +V+  +   + +PN   +   I  +  +  +++AL ++  M    + P     N+++  L
Sbjct: 114 NVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGL 168

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            KKG      K  G+++A     A+ +V+T   L+D   + GD  +A  L+++M +K I 
Sbjct: 169 VKKGRFDTMWKVYGDMVARG---ASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF 225

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             +V Y +LI G C    IS A + F  M   G LP++ TYNT+++  CK   + +A   
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  +   G+ P+ +++  +I GLC   ++V AR+FL+ M    VVP   ++N +IDGY +
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G+LS A S+   +    +  +VFT++ LI        + +A  L +EM   G  P+  T
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN LI   C  G++  A+++  +M  +GI P+IIT++ LI G+C  G M+ A  ++ ++ 
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             GL  D + +  L   + +   + +A  +H++
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKE 498



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 182/365 (49%), Gaps = 12/365 (3%)

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA--VKFLGEVLADDDGKATSDVITST 265
            ++ S + ++   PN     +L+ A  + GL+ +A  V +  +VL          +    
Sbjct: 113 FNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMDVLPA--------MQACN 162

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           +++D   K G       ++ DM  +    ++V Y  LI+G C  GD   AF  F +M+++
Sbjct: 163 MVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEK 222

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
              P V+ Y  L+  LC + ++ EA   +  +  +G+ P+  +Y T++ G C    + KA
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E    ML   ++P    + ++IDG  +  ++ +A      M SFGV  N+F +N LI  
Sbjct: 283 LELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G++ +A SL  E+    I PDVFTY++LI   C +  +  A  L  EM ++G  P+
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            +TY  LI G+C  GNM++A EV +++   G+  + I F  L   Y +  + + A  ++ 
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 566 KWLLR 570
           + +++
Sbjct: 463 EMVIK 467



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 151/303 (49%), Gaps = 3/303 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +IR LC   +I  A  + R M   G +P++ T+N +++  CKI  ++KA  + +EM 
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  T+   I G C+ +E+  A      MA+ G+ PN   +N L+   CK G L 
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+    E+   +  +   DV T +IL+          +A  L  +M +K    + V YN
Sbjct: 351 EALSLHSEI---EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G+C  G++  A     QM ++G  P++IT++TL++  CK GK++ A   Y  +   
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ PD ++Y  +I G    G+  +A      M E  + P     + +IDG  + G +S+A
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA 527

Query: 421 FSI 423
             +
Sbjct: 528 IKL 530



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 150/298 (50%), Gaps = 8/298 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E     +TMR++G     +  +   +  ++   C    +  AL L ++M+  G +P+V
Sbjct: 244 ISEAESMFRTMRNSG-----MLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNV 298

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T   L++ LCK  ++  A   + +M+     PN   YN  I GYC+   L +AL L S 
Sbjct: 299 VTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE 358

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           +  + I P+  T++IL+  LC    + +A   L E+          + +T   L+D Y K
Sbjct: 359 IEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM---KKKGFLPNAVTYNTLIDGYCK 415

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G+  +A+ + + M +K I+ +I+ ++ LI+G+C  G + +A   + +M+ +G LPDV+ 
Sbjct: 416 EGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVA 475

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           Y  L++   K G   EA   +  + + G+ P+  +   +I GLC  G I  A +  L+
Sbjct: 476 YTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA 533



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 99/452 (21%), Positives = 180/452 (39%), Gaps = 54/452 (11%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G +  AL L  ++ +   +PDV T++ L+  LC +  +E+AD +++EM +  
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK-------- 235
             PN  TYN  I GYC+   ++KA+ + S M   GI PN +T + L+   CK        
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458

Query: 236 --------KGLLGDAVKFLGEV---LADDDGKAT-------------SDVITSTILMDSY 271
                   KGLL D V +   +     D + K                +V T + L+D  
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518

Query: 272 FKNGDKFQALALW------NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK- 324
            K+G    A+ L+      +    K  + D   Y +      L   IS       ++ K 
Sbjct: 519 CKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLALSLFRGISEPCICVIRVTKL 578

Query: 325 -----------RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
                         L    +  TL   L           F  +L K   + D  S    +
Sbjct: 579 FATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFAL 638

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
           +   +   +V+ ++    ++     P   +   +I  Y   G++++A ++ D +     S
Sbjct: 639 KACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEI----PS 694

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            N+ ++ ++I A         A  L ++M +D + PD+ T  + + A  +LG + +   +
Sbjct: 695 KNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWI 754

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           +  +  RG+  D+     LI  +   G +  A
Sbjct: 755 HAYIRHRGLDTDLCLNNSLINMYSKCGEIGTA 786



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 104/444 (23%), Positives = 189/444 (42%), Gaps = 36/444 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC   ++  A  L ++M +KG +P+ +T+N L++  CK G++EKA  V  +M+E  
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T++  I GYC+  +++ A+ L++ M   G+ P+ V +  L+    K G   +A 
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+    +     +V T + L+D   K+G    A+ L    F     TD        
Sbjct: 494 RLHKEM---QEAGLHPNVFTLSCLIDGLCKDGRISDAIKL----FLAKTGTDTTGSK--- 543

Query: 304 NGFCLNGDISSAFAYFCQM---LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
                  ++  +    C +   L RG     I       C+ +  KL   ++       T
Sbjct: 544 -----TNELDRSLYQMCSLALSLFRGISEPCI-------CVIRVTKLFATNNQPKAHLHT 591

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC---GDL 417
            + P + S +T+ + L    +  K   F   +L K+  P       ++     C     L
Sbjct: 592 HLKPPK-SNQTLKRYL-QSSNTSKVLLFFRILLRKN--PSSIDSFSLMFALKACTLKSSL 647

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
                +  L+++FG    +F   +LI   +  G++ DA ++  E+       ++ ++  +
Sbjct: 648 VEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSK----NLISWTSV 703

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I A  +    + ALQL+ +M    + PDI+T T  +      G +   E + A I+  GL
Sbjct: 704 ISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGL 763

Query: 538 AIDHIPFRILKKRYRRMKESDKAR 561
             D      L   Y +  E   AR
Sbjct: 764 DTDLCLNNSLINMYSKCGEIGTAR 787



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 105/266 (39%), Gaps = 52/266 (19%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           +I  G  P +     L++     G++  A ++  E+    PS N  ++ + I+ Y     
Sbjct: 657 VINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEI----PSKNLISWTSVISAYVDNQR 712

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            +KAL LF  M  + ++P+ VT  + + A    G L      +GE               
Sbjct: 713 PNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALD-----MGE--------------- 752

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
               + +Y ++               + + TD+   N LIN +   G+I +A  +     
Sbjct: 753 ---WIHAYIRH---------------RGLDTDLCLNNSLINMYSKCGEIGTARRFSL--- 791

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEA-SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
               LP+ +T+  +L      G ++E   HF  +     + P    +  ++  LC  G +
Sbjct: 792 ---VLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLL 848

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVII 408
            +A EF+L M    V P   +W  ++
Sbjct: 849 TEAYEFILKM---PVRPNAVVWRTLL 871



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 51/265 (19%), Positives = 103/265 (38%), Gaps = 54/265 (20%)

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           +   T L+  Y   G+   A  +++++  KN+    +++  +I+ +  N   + A   F 
Sbjct: 666 IFLQTSLISMYSATGNVADAHNMFDEIPSKNL----ISWTSVISAYVDNQRPNKALQLFR 721

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           QM      PD++T    L+     G LD     +  +   G+  D          LC++ 
Sbjct: 722 QMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTD----------LCLN- 770

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA--FSIRDLMLSFGVSSNVFT 438
                                   N +I+ Y +CG++  A  FS+        V  N  T
Sbjct: 771 ------------------------NSLINMYSKCGEIGTARRFSL--------VLPNDVT 798

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           F  +++A +  G + +     + M  D  + P +  +  ++   C  G   L  + Y+ +
Sbjct: 799 FMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAG---LLTEAYEFI 855

Query: 498 LRRGITPDIITYTELIKGHCARGNM 522
           L+  + P+ + +  L+ G C+   M
Sbjct: 856 LKMPVRPNAVVWRTLL-GACSLQGM 879


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 224/446 (50%), Gaps = 7/446 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  GK+  A+   ++M   G   D++ +  L+   C  G+L++   +  E+ E  
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP   TYN  I G+C++ +L +A  +F  M   G+RPN  T+  L+  LC  G   +A+
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L  ++  D+     + +T  I+++   K+G    A+ +   M ++  + D + YN+L+
Sbjct: 338 QPLNLMIEKDE---EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFL--PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
            G C  GD+  A      MLK      PDVI+YN L++ LCK+ +L +A   Y +L +  
Sbjct: 395 GGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
            A D+++   ++      GD+ KA E    + +  +V     +  +IDG+ + G L+ A 
Sbjct: 455 GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAK 514

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   M    +  +VF +N L+ +  + GS+  A+ L +EM  D  FPDV ++N++I  S
Sbjct: 515 GLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGS 574

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID- 540
              G I  A  L   M R G++PD+ TY++LI      G + EA   F K+   G   D 
Sbjct: 575 LKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634

Query: 541 HIPFRILKKRYRRMKESDKARDIHQK 566
           HI   +LK    +  E+DK  ++ +K
Sbjct: 635 HICDSVLKYCISQ-GETDKLTELVKK 659



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 226/497 (45%), Gaps = 69/497 (13%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K G A  +   M+++G   +V  HN L+  LC+  +  KA  ++REM      P+  +YN
Sbjct: 122 KTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYN 181

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL-- 250
             I G+C   EL+KAL L + M  +G   + VT  IL+ A CK G + +A+ FL E+   
Sbjct: 182 TVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFM 241

Query: 251 ---AD-----------------DDGKATSD----------VITSTILMDSYFKNGDKFQA 280
              AD                 D GKA  D           IT   L+  + K G   +A
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
             ++  M ++ ++ ++  Y  LI+G C  G    A      M+++   P+ +TYN ++N 
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINK 361

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           LCK G + +A     ++ K    PD I+Y  ++ GLC  GD+ +A + L  ML+ S   +
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421

Query: 401 PHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P +  +N +I G  +   L  A  I DL++    + +  T N L+ +  + G +  A  L
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481

Query: 459 KKEM--------------LLDG---------------------IFPDVFTYNLLIGASCN 483
            K++              ++DG                     + P VF YN L+ + C 
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A +L++EM R    PD++++  +I G    G++K AE +   +   GL+ D   
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601

Query: 544 FRILKKRYRRMKESDKA 560
           +  L  R+ ++   D+A
Sbjct: 602 YSKLINRFLKLGYLDEA 618



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 215/450 (47%), Gaps = 10/450 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E +  LK M+  G     LE D   + ++IR  C  G++     L  +++++G  P  
Sbjct: 228 MDEAMGFLKEMKFMG-----LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N L+   CK+G L++A  +   M E    PN  TY   I G C V +  +AL   + 
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNL 342

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M      PN VT+NI+++ LCK GL+ DAV+ + E++     +   D IT  IL+     
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV-ELMKKR--RTRPDNITYNILLGGLCA 399

Query: 274 NGDKFQALALWNDMFQKNIQTD--IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            GD  +A  L   M + +  TD  +++YN LI+G C    +  A   +  ++++    D 
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +T N LLN   K G +++A   +  +S + +  +  +Y  +I G C  G +  A+  L  
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M    + P    +N ++    + G L  A+ + + M       +V +FN +I    + G 
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           I  A SL   M   G+ PD+FTY+ LI     LG++  A+  +D+M+  G  PD      
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           ++K   ++G   +  E+  K+    + +D 
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKDIVLDK 669



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 196/400 (49%), Gaps = 7/400 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A    RKM++  T  + ++ + L+    ++     A  V+  M +   + N   +N  + 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G CR  E  KA+ L   M  N + P+  ++N ++   C+   L  A++   E+     G 
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM----KGS 206

Query: 257 ATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
             S  ++T  IL+D++ K G   +A+    +M    ++ D+V Y  LI GFC  G++   
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
            A F ++L+RG  P  ITYNTL+   CK G+L EAS  +  + + GV P+  +Y  +I G
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           LC  G   +A + L  M+EK   P    +N+II+   + G +++A  I +LM       +
Sbjct: 327 LCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIF--PDVFTYNLLIGASCNLGHIHLALQL 493
             T+N L+      G + +A  L   ML D  +  PDV +YN LI   C    +H AL +
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YD ++ +    D +T   L+      G++ +A E++ +I 
Sbjct: 447 YDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQIS 486



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 176/407 (43%), Gaps = 55/407 (13%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVN--------ELDKALHLFSTMANNGIR 220
           L + +HV+R++  + P       NAF     ++         +L  A+ +F    ++G  
Sbjct: 13  LRRDEHVVRKL--LNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSS 70

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF---KNGDK 277
                 N++   L +      A  F  ++L  D      + ++ + L++ Y    K G  
Sbjct: 71  LAFAGSNLMAK-LVRSRNHELAFSFYRKMLETD---TFINFVSLSGLLECYVQMRKTGFA 126

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT- 336
           F  LAL   M ++    ++  +N+L+ G C N +   A +   +M +   +PDV +YNT 
Sbjct: 127 FGVLAL---MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTV 183

Query: 337 ----------------------------------LLNCLCKQGKLDEASHFYGVLSKTGV 362
                                             L++  CK GK+DEA  F   +   G+
Sbjct: 184 IRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGL 243

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D + Y ++I+G C  G++ + +     +LE+   P    +N +I G+ + G L  A  
Sbjct: 244 EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I + M+  GV  NV+T+  LI      G   +A      M+     P+  TYN++I   C
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLC 363

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
             G +  A+++ + M +R   PD ITY  L+ G CA+G++ EA ++ 
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 158/347 (45%), Gaps = 40/347 (11%)

Query: 102 KTMRDTGPVRCTLETDYRRHVA----VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           KT     P+   +E D   +      +I  LC  G +  A+ +   M ++ T PD +T+N
Sbjct: 332 KTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYN 391

Query: 158 YLVNELCKIGDLEKADHVIREM--SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
            L+  LC  GDL++A  ++  M        P+  +YNA I G C+ N L +AL ++  + 
Sbjct: 392 ILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV 451

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI--------- 266
                 +RVT NIL+++  K G +  A++   ++ +D      SD  T+ I         
Sbjct: 452 EKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI-SDSKIVRNSDTYTAMIDGFCKTGML 510

Query: 267 ------------------------LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                   L+ S  K G   QA  L+ +M + N   D+V++N++
Sbjct: 511 NVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIM 570

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G    GDI SA +    M + G  PD+ TY+ L+N   K G LDEA  F+  +  +G 
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGF 630

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
            PD     ++++     G+  K  E +  +++K +V +  +   ++D
Sbjct: 631 EPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMD 677



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 131/263 (49%), Gaps = 3/263 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   + A+I  LC   ++  AL +   +++K    D +T N L+N   K GD+ KA  
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           + +++S+ +   N  TY A I G+C+   L+ A  L   M  + ++P+   +N L+ +LC
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G L  A +   E+  D++     DV++  I++D   K GD   A +L   M +  +  
Sbjct: 541 KEGSLDQAWRLFEEMQRDNN---FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D+  Y+ LIN F   G +  A ++F +M+  GF PD    +++L     QG+ D+ +   
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELV 657

Query: 355 GVLSKTGVAPDQISYKTIIQGLC 377
             L    +  D+    T++  +C
Sbjct: 658 KKLVDKDIVLDKELTCTVMDYMC 680



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 74/151 (49%)

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AF +  LML  G + NV+  N L+    R      A SL +EM  + + PDVF+YN +I 
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C    +  AL+L +EM   G +  ++T+  LI   C  G M EA     +++ +GL  
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           D + +  L + +    E D+ + +  + L R
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLER 276



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 106/251 (42%), Gaps = 35/251 (13%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           AF+++ +ML+     + ++ + LL C  +  K   A     ++ K G A +  ++  +++
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           GLC + +  KA   L  M   S++P+                                  
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPD---------------------------------- 176

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
            VF++N +I     G  +  A  L  EM   G    + T+ +LI A C  G +  A+   
Sbjct: 177 -VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
            EM   G+  D++ YT LI+G C  G +   + +F ++   G +   I +  L + + ++
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295

Query: 555 KESDKARDIHQ 565
            +  +A +I +
Sbjct: 296 GQLKEASEIFE 306


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 202/406 (49%), Gaps = 4/406 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G    +L L   M++KG  PDV+    L+     + ++ KA  V+ E+ E    P+ 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             YNA I G+C++N +D A  +   M +    P+ VT+NI++ +LC +G L  A+K L +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +L+D+       VIT TIL+++    G   +AL L ++M  + ++ D+  YN +I G C 
Sbjct: 219 LLSDN---CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G +  AF     +  +G  PDVI+YN LL  L  QGK +E       +      P+ ++
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I  LC  G I +A   L  M EK + P+ + ++ +I  + R G L  A    + M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           S G   ++  +N ++    + G    A  +  ++   G  P+  +YN +  A  + G   
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
            AL +  EM+  GI PD ITY  +I   C  G + EA E+   +++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 202/437 (46%), Gaps = 4/437 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   + A+I   C   +I  A  +  +M  K   PD +T+N ++  LC  G L+ A  
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+ ++      P   TY   I        +D+AL L   M + G++P+  T+N ++  +C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G++  A + +  +   +   +  DVI+  IL+ +    G   +   L   MF +    
Sbjct: 275 KEGMVDRAFEMVRNL---ELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++V Y++LI   C +G I  A      M ++G  PD  +Y+ L+   C++G+LD A  F 
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G  PD ++Y T++  LC +G   +A E    + E    P    +N +       
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           GD   A  +   M+S G+  +  T+N++I    R G + +AF L  +M      P V TY
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N+++   C    I  A+ + + M+  G  P+  TYT LI+G    G   EA E+   +  
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571

Query: 535 LGLAIDHIPFRILKKRY 551
           +  AI    F+ L + +
Sbjct: 572 ID-AISEYSFKRLHRTF 587



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 177/381 (46%), Gaps = 4/381 (1%)

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           C+ G+  ++ H++  M     +P+       I G+  +  + KA+ +   +   G +P+ 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
             +N L++  CK   + DA + L  + + D    + D +T  I++ S    G    AL +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKD---FSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            N +   N Q  ++ Y +LI    L G +  A     +ML RG  PD+ TYNT++  +CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
           +G +D A      L   G  PD ISY  +++ L   G   +  + +  M  +   P    
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           ++++I    R G +  A ++  LM   G++ + ++++ LI A  R G +  A    + M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
            DG  PD+  YN ++   C  G    AL+++ ++   G +P+  +Y  +     + G+  
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 524 EAEEVFAKIQTLGLAIDHIPF 544
            A  +  ++ + G+  D I +
Sbjct: 456 RALHMILEMMSNGIDPDEITY 476



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 156/310 (50%), Gaps = 3/310 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  +IR +C  G +  A  + R +  KG+ PDV+++N L+  L   G  E+ +
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGE 318

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M   +  PN  TY+  IT  CR  ++++A++L   M   G+ P+  +++ L+ A 
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C++G L  A++FL  +++D       D++    ++ +  KNG   QAL ++  + +    
Sbjct: 379 CREGRLDVAIEFLETMISDG---CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +  +YN + +    +GD   A     +M+  G  PD ITYN++++CLC++G +DEA   
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +      P  ++Y  ++ G C    I  A   L SM+     P    + V+I+G G 
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGF 555

Query: 414 CGDLSNAFSI 423
            G  + A  +
Sbjct: 556 AGYRAEAMEL 565



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 163/366 (44%), Gaps = 6/366 (1%)

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           CR     ++LHL  TM   G  P+ +    L+        +  AV+ + E+L   +    
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EIL---EKFGQ 155

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            DV     L++ + K      A  + + M  K+   D V YN++I   C  G +  A   
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             Q+L     P VITY  L+     +G +DEA      +   G+ PD  +Y TII+G+C 
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G + +A E + ++  K   P+   +N+++      G       +   M S     NV T
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           ++ LI    R G I +A +L K M   G+ PD ++Y+ LI A C  G + +A++  + M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             G  PDI+ Y  ++   C  G   +A E+F K+  +G + +   +  +          D
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL--WSSGD 453

Query: 559 KARDIH 564
           K R +H
Sbjct: 454 KIRALH 459


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 202/420 (48%), Gaps = 3/420 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           L  G K+     +  +M  +G  PDV+T N L+  LC+   +  A  ++ EMS    +P+
Sbjct: 172 LVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPD 231

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             T+   + G+     ++ AL + + M   G  P  VT N+L++  CK G + DA+ ++ 
Sbjct: 232 ETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQ 291

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           + +AD       D +T    +    +NG    AL + + M Q+    D+  YN +IN   
Sbjct: 292 QEIADG---FEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLS 348

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            NG++  A     QM+ RG LPD  T+NTL+  L  Q +L+EA      L+  G++PD  
Sbjct: 349 KNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVY 408

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           ++  +I  LC  GD          M      P+   +N++ID     G L NA  + + M
Sbjct: 409 TFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEM 468

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
            S G   +  T+N +I A  +   I +A  +  +M   GI     T+N LI   C    I
Sbjct: 469 ESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRI 528

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A +L ++M++ G+ P+ ITY  ++  +C +GN+K+A ++   +   G  ID + +  L
Sbjct: 529 DDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTL 588



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 213/491 (43%), Gaps = 45/491 (9%)

Query: 92  LILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           L L E++    T R   P   TL T       +I+ LC   ++ TA+ +  +M   G  P
Sbjct: 178 LKLLESVYNEMTGRGIQPDVVTLNT-------LIKALCRAHQVRTAVLMLEEMSSHGVAP 230

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D  T   L+    + G +E A  V  +M E   SP   T N  I GYC++  ++ AL   
Sbjct: 231 DETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYI 290

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
                +G  P++VT+N  VH LC+ G +  A+K +  +L +       DV T   +++  
Sbjct: 291 QQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGH---DPDVFTYNTVINCL 347

Query: 272 FKNGDKFQALALWNDMFQ-----------------------------------KNIQTDI 296
            KNG+  +A  + N M                                     K +  D+
Sbjct: 348 SKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDV 407

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             +N+LIN  C  GD       F +M   G  PD +TYN L++ LC  GKL  A      
Sbjct: 408 YTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNE 467

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G     ++Y TII  LC    I +A E    M  + +      +N +IDG  +   
Sbjct: 468 MESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKR 527

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           + +A  + + M+  G+  N  T+N+++    + G+I  A  + + M  +G   DV TY  
Sbjct: 528 IDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGT 587

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C  G   +AL+L   M  +GI P    Y  +I+    R N+++A  +F ++  +G
Sbjct: 588 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVG 647

Query: 537 LAIDHIPFRIL 547
              D + ++I+
Sbjct: 648 EPPDALTYKIV 658



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 197/416 (47%), Gaps = 3/416 (0%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G   D +  N+L+N L +   L+  + V  EM+     P+  T N  I   CR +++  A
Sbjct: 157 GVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTA 216

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + +   M+++G+ P+  T   L+    ++G +  A++   +++   +   +   +T  +L
Sbjct: 217 VLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMM---EAGCSPTGVTVNVL 273

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           ++ Y K G    AL           + D V YN  ++G C NG +S A      ML+ G 
Sbjct: 274 INGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGH 333

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PDV TYNT++NCL K G+LDEA      +   G  PD  ++ T+I  L     + +A +
Sbjct: 334 DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALD 393

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               +  K + P+ + +N++I+   + GD      + + M S G + +  T+N LI    
Sbjct: 394 LARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLC 453

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G + +A  L  EM  +G      TYN +I A C    I  A +++D+M  +GI+   +
Sbjct: 454 SMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAV 513

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           T+  LI G C    + +A E+  ++   GL  ++I +  +   Y +     KA DI
Sbjct: 514 TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADI 569



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 207/433 (47%), Gaps = 10/433 (2%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
            P+R    +D  R +A +R+            L   + ++   P    +  +V +L   G
Sbjct: 46  APLRVYAISDQDRLLAALREQ--SDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAG 103

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN---GIRPNRV 224
             +  + ++REM             +F+  Y R+   D A+ L     +N   G++ + V
Sbjct: 104 AFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTV 163

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALAL 283
             N L++ L +    G  +K L  V  +  G+    DV+T   L+ +  +      A+ +
Sbjct: 164 VFNHLLNVLVE----GSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLM 219

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
             +M    +  D   +  L+ GF   G I +A     +M++ G  P  +T N L+N  CK
Sbjct: 220 LEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCK 279

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G++++A  +       G  PDQ++Y T + GLC +G +  A + +  ML++   P+   
Sbjct: 280 MGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFT 339

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N +I+   + G+L  A  I + M+  G   +  TFN LI+A +    + +A  L +E+ 
Sbjct: 340 YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELT 399

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
           + G+ PDV+T+N+LI A C +G  HL ++L++EM   G TPD +TY  LI   C+ G + 
Sbjct: 400 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLG 459

Query: 524 EAEEVFAKIQTLG 536
            A ++  ++++ G
Sbjct: 460 NALDLLNEMESNG 472



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 204/427 (47%), Gaps = 4/427 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G++  AL   ++ I  G  PD +T+N  V+ LC+ G +  A  V+  M +  
Sbjct: 273 LINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEG 332

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYN  I    +  ELD+A  + + M + G  P+  T N L+ AL  +  L +A+
Sbjct: 333 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEAL 392

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+        + DV T  IL+++  K GD    + L+ +M       D V YN+LI
Sbjct: 393 DLARELTVKG---LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILI 449

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G + +A     +M   G     +TYNT+++ LCK+ +++EA   +  +   G++
Sbjct: 450 DHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGIS 509

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
              +++ T+I GLC    I  A E +  M+++ + P    +N I+  Y + G++  A  I
Sbjct: 510 RSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADI 569

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M + G   +V T+  LI    + G    A  L + M + GI P    YN +I +   
Sbjct: 570 LETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFR 629

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHC-ARGNMKEAEEVFAKIQTLGLAIDHI 542
             ++  AL L+ EM   G  PD +TY  + +  C   G +KEA +   ++   G   +  
Sbjct: 630 RNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFS 689

Query: 543 PFRILKK 549
            FR+L +
Sbjct: 690 SFRMLAE 696



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 180/363 (49%), Gaps = 4/363 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  L   G++  A  +  +M+ +G +PD  T N L+  L     LE+A  + RE++   
Sbjct: 343 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKG 402

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP+  T+N  I   C+V +    + LF  M ++G  P+ VT+NIL+  LC  G LG+A+
Sbjct: 403 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNAL 462

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E+  + +G   S V  +TI+ D+  K     +A  +++ M  + I    V +N LI
Sbjct: 463 DLLNEM--ESNGCPRSTVTYNTII-DALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLI 519

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C    I  A     QM+K G  P+ ITYN++L   CKQG + +A+     ++  G  
Sbjct: 520 DGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFE 579

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D ++Y T+I GLC  G    A + L  M  K + P P  +N +I    R  +L +A ++
Sbjct: 580 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNL 639

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGS-IFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
              M   G   +  T+  +  +  RGG  I +AF    EM+  G  P+  ++ +L     
Sbjct: 640 FREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLL 699

Query: 483 NLG 485
           NLG
Sbjct: 700 NLG 702



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 116/259 (44%), Gaps = 15/259 (5%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L   LD L  M   G  R T+  +      +I  LC   +I  A  +  +M  +G     
Sbjct: 458 LGNALDLLNEMESNGCPRSTVTYN-----TIIDALCKKMRIEEAEEVFDQMDAQGISRSA 512

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T N L++ LCK   ++ A  +I +M +    PN  TYN+ +T YC+   + KA  +  T
Sbjct: 513 VTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILET 572

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD---DDGKATSDVITSTILMDS 270
           M  NG   + VT+  L++ LCK G    A+K L  +         KA + VI       S
Sbjct: 573 MTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVI------QS 626

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG-DISSAFAYFCQMLKRGFLP 329
            F+  +   AL L+ +M +     D + Y ++    C  G  I  AF +  +M+ +GF+P
Sbjct: 627 LFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMP 686

Query: 330 DVITYNTLLNCLCKQGKLD 348
           +  ++  L   L   G  D
Sbjct: 687 EFSSFRMLAEGLLNLGMDD 705



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 97/231 (41%), Gaps = 10/231 (4%)

Query: 337 LLNCLCKQGKLDEASHFY-GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           LL  L +Q   + A       L++   AP    Y+ I+Q L   G        +  M  +
Sbjct: 59  LLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRRE 118

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML------SFGVSSNVFTFNALILAETRG 449
                  +    ++ Y R     +A    DL+L      +FGV ++   FN L+     G
Sbjct: 119 GHQVRAVVVRSFVESYARLRRFDDAV---DLVLNQLDNDTFGVQADTVVFNHLLNVLVEG 175

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             +    S+  EM   GI PDV T N LI A C    +  A+ + +EM   G+ PD  T+
Sbjct: 176 SKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTF 235

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           T L++G    G+++ A  V AK+   G +   +   +L   Y +M   + A
Sbjct: 236 TTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDA 286


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 212/444 (47%), Gaps = 5/444 (1%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           + L  +RD     C  E D   + AV++ LC+  + G    L  +M++    P+++T N 
Sbjct: 210 EALHLLRDLPSFGC--EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           L++ LC+ G  E+   V+ +M E   +P+   Y   I G C+   L+ A  + + M + G
Sbjct: 268 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 327

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           ++PN V +N L+  LC      +  + L E+    D     D +T  IL+D + +NG   
Sbjct: 328 LKPNVVCYNTLLKGLCSAERWEETEELLAEMF---DKDCPLDDVTFNILVDFFCQNGLVD 384

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           + + L   M ++    D++ Y  +INGFC  G I  A      M   G  P+ I+Y  +L
Sbjct: 385 RVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVL 444

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             LC   +  +A      + + G   + I++ T+I  LC  G + +A E L  ML     
Sbjct: 445 KGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCS 504

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P+   ++ +IDG G+ G    A  + ++M++ G+S N   ++++  A +R G I     +
Sbjct: 505 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQM 564

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
              +    I  D   YN +I + C  G    A++    M+  G  P+  TYT LI+G  +
Sbjct: 565 FDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLAS 624

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHI 542
            G +KEA+E+  ++ + G    H+
Sbjct: 625 EGFVKEAQEMLTELCSKGALRKHL 648



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 199/455 (43%), Gaps = 4/455 (0%)

Query: 106 DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCK 165
           D  P R         HV ++   C GG   +A+ +   +  +G   DV   N ++N +C 
Sbjct: 146 DEMPRRGCAPIPPMYHV-ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICD 204

Query: 166 IGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
            G +++A H++R++      P+  +YNA + G C          L   M      PN VT
Sbjct: 205 QGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVT 264

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
            N L+  LC+ GL     + L +++   +   T D+     ++D   K G    A  + N
Sbjct: 265 FNTLISYLCRNGLFERVHEVLAQMV---EHGCTPDIRMYATIIDGICKEGHLEVAHEILN 321

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M    ++ ++V YN L+ G C             +M  +    D +T+N L++  C+ G
Sbjct: 322 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNG 381

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
            +D        + + G  PD I+Y T+I G C  G I +A   L SM      P    + 
Sbjct: 382 LVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 441

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
           +++ G        +A  +   M+  G   N  TFN LI    + G +  A  L K+ML++
Sbjct: 442 IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 501

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G  PD+ +Y+ +I      G    AL+L + M+ +G++P+ I Y+ +       G + + 
Sbjct: 502 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 561

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            ++F  IQ   +  D + +  +     +  E+++A
Sbjct: 562 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERA 596



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 172/378 (45%), Gaps = 6/378 (1%)

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YNA + GYCR  +L+ A  L + +    + PN  T+  +V ALC +G + DA+  L E+ 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEM- 148

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
               G A    +   IL ++  + G    A+ +  D+  +    D+   N+++N  C  G
Sbjct: 149 -PRRGCAPIPPMYHVIL-EAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQG 206

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A      +   G  PDV++YN +L  LC   +          + +    P+ +++ 
Sbjct: 207 SVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFN 266

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T+I  LC +G   +  E L  M+E    P+  ++  IIDG  + G L  A  I + M S+
Sbjct: 267 TLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSY 326

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+  NV  +N L+          +   L  EM       D  T+N+L+   C  G +   
Sbjct: 327 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRV 386

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           ++L ++ML RG  PD+ITYT +I G C  G + EA  +   +   G   + I + I+ K 
Sbjct: 387 IELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 446

Query: 551 YRRMKESDKARDIHQKWL 568
               +    A D+  + +
Sbjct: 447 LCSAERWVDAEDLMSQMI 464



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/443 (22%), Positives = 192/443 (43%), Gaps = 38/443 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  V+R LC  G+I  AL +  +M ++G  P    ++ ++   C+ G    A  V+ ++ 
Sbjct: 125 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 184

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               + +    N  +   C    +D+ALHL   + + G  P+ V++N ++  LC     G
Sbjct: 185 ARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 244

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
              + + E                                      M +     +IV +N
Sbjct: 245 CVQELMEE--------------------------------------MVRMACPPNIVTFN 266

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+  C NG          QM++ G  PD+  Y T+++ +CK+G L+ A      +   
Sbjct: 267 TLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSY 326

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+ + Y T+++GLC      +  E L  M +K    +   +N+++D + + G +   
Sbjct: 327 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRV 386

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + ML  G   +V T+  +I    + G I +A  L K M   G  P+  +Y +++  
Sbjct: 387 IELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 446

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C+      A  L  +M+++G   + IT+  LI   C +G +++A E+  ++   G + D
Sbjct: 447 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 506

Query: 541 HIPFRILKKRYRRMKESDKARDI 563
            I +  +     +  ++D+A ++
Sbjct: 507 LISYSTVIDGLGKAGKTDEALEL 529


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 202/406 (49%), Gaps = 4/406 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G    +L L   M++KG  PDV+    L+     + ++ KA  V+ E+ E    P+ 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             YNA I G+C++N +D A  +   M +    P+ VT+NI++ +LC +G L  A+K L +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +L+D+       VIT TIL+++    G   +AL L ++M  + ++ D+  YN +I G C 
Sbjct: 219 LLSDN---CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G +  AF     +  +G  PDVI+YN LL  L  QGK +E       +      P+ ++
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I  LC  G I +A   L  M EK + P+ + ++ +I  + R G L  A    + M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           S G   ++  +N ++    + G    A  +  ++   G  P+  +YN +  A  + G   
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
            AL +  EM+  GI PD ITY  +I   C  G + EA E+   +++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 201/437 (45%), Gaps = 4/437 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   + A+I   C   +I  A  +  +M  K   PD +T+N ++  LC  G L+ A  
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+ ++      P   TY   I        +D+AL L   M + G++P+  T+N ++  +C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G++  A + +  +   +      DVI+  IL+ +    G   +   L   MF +    
Sbjct: 275 KEGMVDRAFEMVRNL---ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++V Y++LI   C +G I  A      M ++G  PD  +Y+ L+   C++G+LD A  F 
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G  PD ++Y T++  LC +G   +A E    + E    P    +N +       
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           GD   A  +   M+S G+  +  T+N++I    R G + +AF L  +M      P V TY
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N+++   C    I  A+ + + M+  G  P+  TYT LI+G    G   EA E+   +  
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571

Query: 535 LGLAIDHIPFRILKKRY 551
           +  AI    F+ L + +
Sbjct: 572 ID-AISEYSFKRLHRTF 587



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 177/381 (46%), Gaps = 4/381 (1%)

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           C+ G+  ++ H++  M     +P+       I G+  +  + KA+ +   +   G +P+ 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
             +N L++  CK   + DA + L  + + D    + D +T  I++ S    G    AL +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKD---FSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            N +   N Q  ++ Y +LI    L G +  A     +ML RG  PD+ TYNT++  +CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
           +G +D A      L   G  PD ISY  +++ L   G   +  + +  M  +   P    
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           ++++I    R G +  A ++  LM   G++ + ++++ LI A  R G +  A    + M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
            DG  PD+  YN ++   C  G    AL+++ ++   G +P+  +Y  +     + G+  
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 524 EAEEVFAKIQTLGLAIDHIPF 544
            A  +  ++ + G+  D I +
Sbjct: 456 RALHMILEMMSNGIDPDEITY 476



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 155/310 (50%), Gaps = 3/310 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  +IR +C  G +  A  + R +  KG  PDV+++N L+  L   G  E+ +
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M   +  PN  TY+  IT  CR  ++++A++L   M   G+ P+  +++ L+ A 
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C++G L  A++FL  +++D       D++    ++ +  KNG   QAL ++  + +    
Sbjct: 379 CREGRLDVAIEFLETMISDG---CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +  +YN + +    +GD   A     +M+  G  PD ITYN++++CLC++G +DEA   
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +      P  ++Y  ++ G C    I  A   L SM+     P    + V+I+G G 
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGF 555

Query: 414 CGDLSNAFSI 423
            G  + A  +
Sbjct: 556 AGYRAEAMEL 565



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 163/366 (44%), Gaps = 6/366 (1%)

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           CR     ++LHL  TM   G  P+ +    L+        +  AV+ + E+L   +    
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EIL---EKFGQ 155

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            DV     L++ + K      A  + + M  K+   D V YN++I   C  G +  A   
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             Q+L     P VITY  L+     +G +DEA      +   G+ PD  +Y TII+G+C 
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G + +A E + ++  K   P+   +N+++      G       +   M S     NV T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           ++ LI    R G I +A +L K M   G+ PD ++Y+ LI A C  G + +A++  + M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             G  PDI+ Y  ++   C  G   +A E+F K+  +G + +   +  +          D
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL--WSSGD 453

Query: 559 KARDIH 564
           K R +H
Sbjct: 454 KIRALH 459


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 226/480 (47%), Gaps = 37/480 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++++  C+ G +  AL L  ++++ G VPDV+  + L+N   K+GD+EKA  +   M  M
Sbjct: 330 SLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLM 389

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLF------------------------------- 211
              PN    N+ + G+   N L+ A  LF                               
Sbjct: 390 GIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEAC 449

Query: 212 ---STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
                M + GI P+ V++N L+   CKKG +  A   L  +L   +     + +T T+L+
Sbjct: 450 NLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSIL---ERGLKPNAVTYTLLI 506

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           D +FK GD  +A  ++  M   NI      +N +ING    G +S         +K+GF+
Sbjct: 507 DGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFV 566

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
              ITYN++++   K+G +D A   Y  + ++G++PD I+Y ++I GLC    I  A E 
Sbjct: 567 STSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEM 626

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              M  K +  +   ++ +IDG+ +  D+ +A      +L  G++ N   +N++I     
Sbjct: 627 HSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIH 686

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
             ++  A +L +EM+ + +  D+  Y  +IG     G + LAL LY EML + I PDI+ 
Sbjct: 687 LNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVM 746

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           YT LI G    G ++ A ++  ++    +    + + IL     R     +A  +H + L
Sbjct: 747 YTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEML 806



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 230/490 (46%), Gaps = 41/490 (8%)

Query: 118 YRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR 177
           Y  HV V+R     GK        ++   +G   D   ++ LV  +C+  DL  A  +++
Sbjct: 221 YTLHV-VMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLK 279

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           EM E    P+  TY A I    +     +AL L   M + G+  N +    L+   C  G
Sbjct: 280 EMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLG 339

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            +  A++   EV+   +G    DV+  ++L++   K GD  +A  L+  M    IQ ++ 
Sbjct: 340 DVNLALQLFDEVV---EGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVF 396

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
             N L+ GF     +  A+  F + ++ G + +V+TYN LL  L + GK++EA + +  +
Sbjct: 397 IVNSLLEGFHEQNLLEHAYGLFDEAVEHG-ITNVVTYNILLKWLGELGKVNEACNLWEKM 455

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
              G+ P  +SY  +I G C  G + KA   L S+LE+ + P    + ++IDG+ + GD 
Sbjct: 456 VSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDS 515

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALI--------LAET---------------------- 447
             AF + + M++  ++    TFN +I        ++ET                      
Sbjct: 516 ERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSI 575

Query: 448 -----RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
                + G++  A    +EM   GI PDV TY  LI   C    I LAL+++ +M  +G+
Sbjct: 576 IDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGM 635

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             D++ Y+ LI G C   +M+ A + F ++  +GL  + + +  +   +  +   + A +
Sbjct: 636 KLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALN 695

Query: 563 IHQKWLLRNK 572
           +HQ+ +++NK
Sbjct: 696 LHQE-MIKNK 704



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 186/384 (48%), Gaps = 3/384 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A  L  KM+ KG  P ++++N L+   CK G ++KA  +++ + E    PN  TY
Sbjct: 443 GKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTY 502

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I G+ +  + ++A  +F  M    I P   T N +++ L K G + +    L   + 
Sbjct: 503 TLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIK 562

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                  S  IT   ++D +FK G    AL  + +M +  I  D++ Y  LI+G C +  
Sbjct: 563 QG---FVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNK 619

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I  A      M  +G   DV+ Y+ L++  CK   ++ AS F+  L   G+ P+ + Y +
Sbjct: 620 IGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNS 679

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G     ++  A      M++  V  +  ++  II G  + G LS A  +   MLS  
Sbjct: 680 MISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKD 739

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  ++  +  LI   +  G + +A  + KEM  + I P V  YN+LI  +   G++  A 
Sbjct: 740 IVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAF 799

Query: 492 QLYDEMLRRGITPDIITYTELIKG 515
           +L+DEML +G+ PD  TY  L+ G
Sbjct: 800 RLHDEMLDKGLVPDDTTYDILVNG 823



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 209/444 (47%), Gaps = 15/444 (3%)

Query: 84  QAVFNALDLILKENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLR 141
           QAV   LDL L   L  LK MR+ G  P + T       + AVI      G    AL L+
Sbjct: 263 QAVCRRLDLNLACEL--LKEMREFGWVPSKGT-------YTAVIVACVKQGNFVEALRLK 313

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
            +M+  G   +V+    L+   C +GD+  A  +  E+ E    P+   ++  I G  +V
Sbjct: 314 DEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKV 373

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            +++KA  L++ M   GI+PN    N L+    ++ LL  A     E +        ++V
Sbjct: 374 GDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVE----HGITNV 429

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T  IL+    + G   +A  LW  M  K I   +V+YN LI G C  G +  A++    
Sbjct: 430 VTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKS 489

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           +L+RG  P+ +TY  L++   K+G  + A   +  +    +AP   ++ T+I GL   G 
Sbjct: 490 ILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGR 549

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + + ++ L + +++  V     +N IIDG+ + G + +A      M   G+S +V T+ +
Sbjct: 550 VSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTS 609

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI    +   I  A  +  +M   G+  DV  Y+ LI   C +  +  A + + E+L  G
Sbjct: 610 LIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIG 669

Query: 502 ITPDIITYTELIKGHCARGNMKEA 525
           +TP+ + Y  +I G     NM+ A
Sbjct: 670 LTPNTVVYNSMISGFIHLNNMEAA 693



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 192/382 (50%), Gaps = 4/382 (1%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            +N  +  + RVN++  A+  F TM  + + P     N L+ A+ ++ ++ DA +   E+
Sbjct: 152 VFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEM 211

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +   +     D  T  ++M +  K G   +    + +   + ++ D  AY++L+   C  
Sbjct: 212 V---ERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRR 268

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
            D++ A     +M + G++P   TY  ++    KQG   EA      +   G+  + I  
Sbjct: 269 LDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVT 328

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
           +++++G C+ GD+  A +    ++E  VVP+  I++V+I+G  + GD+  A+ +   M  
Sbjct: 329 RSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKL 388

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+  NVF  N+L+        +  A+ L  E +  GI  +V TYN+L+     LG ++ 
Sbjct: 389 MGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNE 447

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A  L+++M+ +GITP +++Y  LI GHC +G M +A  +   I   GL  + + + +L  
Sbjct: 448 ACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLID 507

Query: 550 RYRRMKESDKARDIHQKWLLRN 571
            + +  +S++A  + ++ +  N
Sbjct: 508 GFFKKGDSERAFVVFEQMMAAN 529



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 137/288 (47%), Gaps = 3/288 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            VI  L   G++          I++G V   +T+N +++   K G ++ A    REM E 
Sbjct: 539 TVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCES 598

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SP+  TY + I G C+ N++  AL + S M   G++ + V ++ L+   CK   +  A
Sbjct: 599 GISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESA 658

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            KF  E+L   D   T + +    ++  +    +   AL L  +M +  +  D+  Y  +
Sbjct: 659 SKFFTELL---DIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSI 715

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G    G +S A   + +ML +  +PD++ Y  L+N L   G+L+ AS     +    +
Sbjct: 716 IGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNI 775

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            P  + Y  +I G    G++ +A      ML+K +VP+   ++++++G
Sbjct: 776 TPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 123/242 (50%), Gaps = 9/242 (3%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   + ++I  LC   KIG AL +   M  KG   DV+ ++ L++  CK+ D+E A 
Sbjct: 600 ISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESAS 659

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
               E+ ++  +PN   YN+ I+G+  +N ++ AL+L   M  N +  +   +  ++  L
Sbjct: 660 KFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGL 719

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K+G L  A+    E+L+ D      D++  T+L++    NG    A  +  +M   NI 
Sbjct: 720 LKEGKLSLALDLYSEMLSKD---IVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNIT 776

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             ++ YN+LI G    G++  AF    +ML +G +PD  TY+ L+N     GKL + SH 
Sbjct: 777 PSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVN-----GKL-KVSHT 830

Query: 354 YG 355
            G
Sbjct: 831 LG 832



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 123/245 (50%)

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           ++D   +N L+  F     I+ A   F  ML+   +P V   N LL  + ++  + +A  
Sbjct: 147 ESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQ 206

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            Y  + + G+  D  +   +++     G   +  +F      + +  +   +++++    
Sbjct: 207 LYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVC 266

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           R  DL+ A  +   M  FG   +  T+ A+I+A  + G+  +A  LK EM+  G+  +V 
Sbjct: 267 RRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVI 326

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
               L+   C LG ++LALQL+DE++  G+ PD++ ++ LI G    G+M++A E++ ++
Sbjct: 327 VTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRM 386

Query: 533 QTLGL 537
           + +G+
Sbjct: 387 KLMGI 391



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 148/336 (44%), Gaps = 6/336 (1%)

Query: 238 LLGDAV---KFLGEVLADDDGKA--TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           + GDA    K   E L +  G+    SD      L+ S+ +      A+  +  M + ++
Sbjct: 122 VFGDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDL 181

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
              +   N L+        +  A   + +M++RG   D  T + ++    K+GK +E   
Sbjct: 182 VPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEK 241

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
           F+      G+  D  +Y  ++Q +C   D+  A E L  M E   VP    +  +I    
Sbjct: 242 FFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACV 301

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           + G+   A  ++D M+S G+  NV    +L+      G +  A  L  E++  G+ PDV 
Sbjct: 302 KQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVV 361

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            +++LI     +G +  A +LY  M   GI P++     L++G   +  ++ A  +F + 
Sbjct: 362 IFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEA 421

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
              G+  + + + IL K    + + ++A ++ +K +
Sbjct: 422 VEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMV 456


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 196/395 (49%), Gaps = 35/395 (8%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N L++ L K  +  +  +V +EM + R  PN  T+N FI G C+  +L+KA  +   +  
Sbjct: 169 NPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKA 228

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G  PN VT+N L+   CKKG                                     G 
Sbjct: 229 WGFSPNIVTYNTLIDGHCKKG-----------------------------------SAGK 253

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
            ++A A+  +M    I  + + +N LI+GFC + ++ +A   F +M ++G  P+++TYN+
Sbjct: 254 MYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNS 313

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L+N L   GKLDEA   +  +   G+ P+ +++  +I G C    I +AR+    + E+ 
Sbjct: 314 LINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQD 373

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           +VP    +N +ID + + G +   F++ + ML  G+  NV T+N LI    R  ++  A 
Sbjct: 374 LVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAK 433

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L  EM    +  DV TYN+LIG  C  G    A +L  EML  G+ P+ +TY  L+ G+
Sbjct: 434 KLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGY 493

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           C  GN+K A +V  +++  G   + + + +L K +
Sbjct: 494 CMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGF 528



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 200/389 (51%), Gaps = 6/389 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  L  G + G   ++ ++MI++   P++ T N  +N LCK G L KA+ VI ++    
Sbjct: 171 LLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWG 230

Query: 184 PSPNCATYNAFITGYCR---VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            SPN  TYN  I G+C+     ++ +A  +   M  N I PN +T N L+   CK   + 
Sbjct: 231 FSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVL 290

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A     E+          +++T   L++    NG   +A+ALW+ M    ++ +IV +N
Sbjct: 291 AAKNAFEEMQRQG---LKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFN 347

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LINGFC    I  A   F  + ++  +P+ IT+NT+++  CK G ++E    +  +   
Sbjct: 348 ALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDE 407

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+  +Y  +I GLC + ++  A++ L  M    +  +   +N++I G+ + G+ S A
Sbjct: 408 GIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKA 467

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +   ML+ GV  N  T+N L+      G++  A  ++ +M  +G   +V TYN+LI  
Sbjct: 468 EKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKG 527

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITY 509
            C  G +  A +L +EML +G+ P+  TY
Sbjct: 528 FCKTGKLEDANRLLNEMLEKGLNPNRTTY 556



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 165/341 (48%), Gaps = 19/341 (5%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK+  A  + ++M+     P+ +T N L++  CK  ++  A +   EM      PN  T
Sbjct: 251 AGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVT 310

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN+ I G     +LD+A+ L+  M   G++PN VT N L++  CKK ++ +A K   ++ 
Sbjct: 311 YNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIA 370

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             D      + IT   ++D++ K G   +  AL N M  + I  ++  YN LI G C N 
Sbjct: 371 EQD---LVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQ 427

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           ++ +A     +M       DV+TYN L+   CK G+  +A    G +   GV P+ ++Y 
Sbjct: 428 NVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYN 487

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T++ G C+ G++  A +    M ++        +NV+I G+ + G L +A  + + ML  
Sbjct: 488 TLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEK 547

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
           G++ N  T++ + L                EML  G  PD+
Sbjct: 548 GLNPNRTTYDVVRL----------------EMLEKGFIPDI 572



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 160/298 (53%), Gaps = 21/298 (7%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L+ +   + ++I  L   GK+  A+ L  KM+  G  P+++T N L+N  CK   ++
Sbjct: 301 RQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIK 360

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  +  +++E    PN  T+N  I  +C+   +++   L ++M + GI PN  T+N L+
Sbjct: 361 EARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLI 420

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LC+   +  A K L E+   ++ +  +DV+T  IL+  + K+G+  +A  L  +M   
Sbjct: 421 AGLCRNQNVRAAKKLLNEM---ENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNV 477

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            ++ + V YN L++G+C+ G++ +A     QM K G   +V+TYN L+   CK GKL++A
Sbjct: 478 GVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDA 537

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP--EPHIWNV 406
           +     + + G+ P++ +Y           D+V+     L MLEK  +P  E H++N+
Sbjct: 538 NRLLNEMLEKGLNPNRTTY-----------DVVR-----LEMLEKGFIPDIEGHLYNI 579



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 155/369 (42%), Gaps = 73/369 (19%)

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           +  ++ + + +L+ +Y  N +   A  ++  +     +  + + N L++      +    
Sbjct: 125 RPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEM 184

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              + +M+KR   P++ T+N  +N LCK GKL++A      +   G +P+ ++Y T+I G
Sbjct: 185 QYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDG 244

Query: 376 LCIHGD---IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR------------------- 413
            C  G    + +A   L  ML   + P    +N +IDG+ +                   
Sbjct: 245 HCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGL 304

Query: 414 ----------------CGDLSNAFSIRDLMLSFGVSSNVFTFNALI-------------- 443
                            G L  A ++ D M+  G+  N+ TFNALI              
Sbjct: 305 KPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARK 364

Query: 444 ----LAET-----------------RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
               +AE                  + G + + F+L   ML +GIFP+V TYN LI   C
Sbjct: 365 LFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLC 424

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
              ++  A +L +EM    +  D++TY  LI G C  G   +AE++  ++  +G+  +H+
Sbjct: 425 RNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHV 484

Query: 543 PFRILKKRY 551
            +  L   Y
Sbjct: 485 TYNTLMDGY 493


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 222/457 (48%), Gaps = 10/457 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  +I DLC   +      L +KM ++   P+  T+N L+N L K   +  A 
Sbjct: 41  IEADVCTYNMLIDDLCKNNRSAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGAT 100

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V  EM  +  SPN  TYN  I G+C     ++AL L   M   G+RP+ V +  L+  L
Sbjct: 101 RVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGL 160

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVI---TSTILMDSYFKNGDKFQALALWNDMFQK 290
            K     D  K L E +     + +  V+     T ++D   K+G   ++L L + MF+ 
Sbjct: 161 SKLAKF-DIAKSLMERI-----RMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKD 214

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
               DI+ ++VLINGFC  G I +A    C+M K G  P+ + Y TL+   CK+G + EA
Sbjct: 215 GASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEA 274

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              Y  +++TG   D      +I  LC  G + +A +F+  M    + P    ++ II+G
Sbjct: 275 FRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIING 334

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           YG  GD   AFS+ D M+  G   + FT+ +L+    +GG++ +A  L  ++       D
Sbjct: 335 YGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVD 394

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
              YN ++  +C  G +  A+ L+ EM++  + PD  TY  ++ G   +G M  A   F 
Sbjct: 395 TNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFE 454

Query: 531 KIQTLG-LAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           K    G L+ + + +  L     ++ +S+ A  I+++
Sbjct: 455 KALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEE 491



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 198/416 (47%), Gaps = 4/416 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M   G VP ++T+N ++N  CK G  + A  +I  M       +  TYN  I   C+ N 
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
             K   L   M    I PN  T+N L++ L K+  +G A +   E+L  +    + + +T
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLN---LSPNRVT 117

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             IL+D +   G+  QAL L + M  K ++ D V Y  L++G         A +   ++ 
Sbjct: 118 YNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIR 177

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G +     Y  +++ LCK G LDE+     ++ K G +PD I++  +I G C  G I 
Sbjct: 178 MSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIK 237

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A+E +  M +  + P   I+  +I    + GD++ AF     M   G   + F  N LI
Sbjct: 238 NAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLI 297

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            +  R G + +A    + M    + P+  T++ +I     LG    A  ++DEM++ G  
Sbjct: 298 SSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHC 357

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID-HIPFRILKKRYRRMKESD 558
           P   TY  L+KG C  GN++EA+++  K+  +  A+D +I   IL +  +R K SD
Sbjct: 358 PSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSD 413



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 202/440 (45%), Gaps = 37/440 (8%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +MI+ G  P   T+  L+  LCK G+L +A  ++ ++  +  + +   YN  ++  C+  
Sbjct: 350 EMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRG 409

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +L  A+ LF  M    + P+  T+ I++  L +KG +  A+ F  + LA   G  + + +
Sbjct: 410 KLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALAR--GTLSPNKV 467

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             T L D  FK G    A  ++ +M  K I  D +A N +++G+   G +      F +M
Sbjct: 468 MYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKM 527

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
                 P + TYN LL+   K+  L + S FY ++++ G++PD+++  +II GLC  G +
Sbjct: 528 QSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGML 587

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
               + L  M+ +  + +    N++I        +  AF + ++    G+  +V T+NA+
Sbjct: 588 DVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAI 647

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE------ 496
                R  ++ ++  L  +ML  GI P    Y  LI   C +G I  A +L DE      
Sbjct: 648 FTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGV 707

Query: 497 -----------------------------MLRRGITPDIITYTELIKGHCARGNMKEAEE 527
                                        ML++ + P + T+T L+   C +  + EA +
Sbjct: 708 SSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALK 767

Query: 528 VFAKIQTLGLAIDHIPFRIL 547
           +  K+   G+ +D + + +L
Sbjct: 768 LRGKMALYGVKLDVVAYNVL 787



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 223/488 (45%), Gaps = 11/488 (2%)

Query: 79  NEGNPQAVFNALDLILKENLDR--LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGT 136
           +E N  A+ + L  + K ++ +  ++ +R +G V       YR + A+I  LC  G +  
Sbjct: 149 DEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMV-----VGYRAYTAMIDGLCKHGLLDE 203

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           +L L   M + G  PD++T + L+N  CK G ++ A  VI +M +   +PN   Y   I 
Sbjct: 204 SLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIY 263

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
             C+  ++ +A   ++TM   G   +    N+L+ +LC+ G + +A  F+  +   D   
Sbjct: 264 NSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTID--- 320

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              + IT   +++ Y   GD  +A +++++M +         Y  L+ G C  G++  A 
Sbjct: 321 LAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAK 380

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               ++       D   YNT+L+  CK+GKL +A   +G + +  V PD  +Y  I+ GL
Sbjct: 381 KLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGL 440

Query: 377 CIHGDIVKAREFLLSMLEKSVV-PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
              G +V A  F    L +  + P   ++  + DG  + G  + A  I + M   G++ +
Sbjct: 441 SRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPD 500

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
               NA++   +R G +     L  +M    + P + TYN+L+        +    + Y+
Sbjct: 501 TIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYN 560

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
            M R GI+PD +T   +I G C  G +    ++  K+      +D +   +L        
Sbjct: 561 IMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETD 620

Query: 556 ESDKARDI 563
           +  KA D+
Sbjct: 621 KMGKAFDL 628



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 191/415 (46%), Gaps = 4/415 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI-REMSEM 182
           ++ + C  GK+  A+ L  +M+Q   +PD  T+  ++  L + G +  A     + ++  
Sbjct: 401 ILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARG 460

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SPN   Y +   G  +V + + A +++  M + GI P+ +  N ++    + G +   
Sbjct: 461 TLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKV 520

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   ++     G  T  + T  IL+  Y K  D  +    +N M +  I  D +  + +
Sbjct: 521 EKLFIKM---QSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSI 577

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G C +G +   F    +M+    L D +T N L+   C+  K+ +A     + +  G+
Sbjct: 578 ILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGI 637

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  +Y  I  GL     + ++   L  MLE+ + P    +  +I+G  R GD+  AF 
Sbjct: 638 IPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFR 697

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           ++D M + GVSS     +A++    + G + +A  +   ML   + P V T+  L+   C
Sbjct: 698 LKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLC 757

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
               +  AL+L  +M   G+  D++ Y  LI G CA G+   A  ++ +++  GL
Sbjct: 758 KKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGL 812



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 178/412 (43%), Gaps = 6/412 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHV 175
           D   +  ++  L   GK+  AL    K + +GT+ P+ + +  L + L K+G    A ++
Sbjct: 429 DSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYI 488

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
             EM     +P+    NA + GY R+ +++K   LF  M +  + P+  T+NIL+H   K
Sbjct: 489 YEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSK 548

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
           K  L    KF   +        + D +T   ++    K+G       +   M  ++   D
Sbjct: 549 KKDLLKCSKFYNIMTRMG---ISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVD 605

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
            +  N+LI   C    +  AF         G +PDV TYN +   L +   L E+     
Sbjct: 606 QLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLH 665

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + + G+ P    Y ++I G+C  GDI  A      M    V       + ++ G  +CG
Sbjct: 666 DMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCG 725

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            +  A  + D ML   +   V TF  L+    +   + +A  L+ +M L G+  DV  YN
Sbjct: 726 KVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYN 785

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           +LI   C  G    A  LY+EM  RG+ P+  TY  LI       N  E EE
Sbjct: 786 VLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDA--ISTNEGEVEE 835



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 181/392 (46%), Gaps = 4/392 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
            R TL  +   + ++   L   G+   A ++  +M  KG  PD +  N +++   ++G +
Sbjct: 458 ARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKM 517

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           EK + +  +M     +P+ ATYN  + GY +  +L K    ++ M   GI P+++T + +
Sbjct: 518 EKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSI 577

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LCK G+L    K L +++ +D      D +T  +L+ +  +     +A  L N    
Sbjct: 578 ILGLCKSGMLDVGFKMLKKMIMED---TLVDQLTLNMLITNSCETDKMGKAFDLLNIKNL 634

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             I  D+  YN +  G      +  +      ML+RG  P    Y +L+N +C+ G +  
Sbjct: 635 LGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQG 694

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A      +   GV+   ++   +++GL   G + +A   L  ML+K ++P    +  ++ 
Sbjct: 695 AFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMH 754

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
              +   LS A  +R  M  +GV  +V  +N LI      G    AF+L +EM   G++P
Sbjct: 755 MLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWP 814

Query: 470 DVFTYNLLIGA-SCNLGHIHLALQLYDEMLRR 500
           +  TY  LI A S N G +   L +Y E   +
Sbjct: 815 NTTTYCTLIDAISTNEGEVEERLLVYLEQFEK 846



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 154/347 (44%), Gaps = 3/347 (0%)

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  +G  P  VT+N +++  CKKG    A   +  +   +     +DV T  +L+D   K
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRM---ESKGIEADVCTYNMLIDDLCK 57

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           N    +   L   M ++ I  +   YN LING      I  A   F +ML     P+ +T
Sbjct: 58  NNRSAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVT 117

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN L++  C  G  ++A     V+   G+ PD+++Y  ++ GL        A+  +  + 
Sbjct: 118 YNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIR 177

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
              +V     +  +IDG  + G L  +  + D+M   G S ++ TF+ LI    + G I 
Sbjct: 178 MSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIK 237

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  +  +M   G+ P+   Y  LI  SC  G I  A + Y  M R G   D      LI
Sbjct: 238 NAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLI 297

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
              C  G + EAE+    + T+ LA + I F  +   Y  + ++ KA
Sbjct: 298 SSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKA 344



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 83/169 (49%)

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           VP    +N I++   + G    A  + D M S G+ ++V T+N LI    +       + 
Sbjct: 7   VPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYL 66

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L K+M    I P+ FTYN LI        I  A ++++EML   ++P+ +TY  LI GHC
Sbjct: 67  LLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHC 126

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             GN ++A  +   ++  GL  D + +  L     ++ + D A+ + ++
Sbjct: 127 DCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMER 175



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/106 (23%), Positives = 43/106 (40%)

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G  P + TYN ++   C  G    A  L D M  +GI  D+ TY  LI   C      + 
Sbjct: 5   GYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKG 64

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             +  K++   +A +   +  L     + ++   A  +  + L+ N
Sbjct: 65  YLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLN 110


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 207/453 (45%), Gaps = 67/453 (14%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           ++   G  P +LT N ++N LCK G +++A  V  ++ +    P+  TY + I G+CR  
Sbjct: 187 QIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNR 246

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV------------- 249
           +LDKA  +F  M  +G  PN VT++ L++ LC +G +G+A+  L E+             
Sbjct: 247 KLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYT 306

Query: 250 -----------------LADDDGK--ATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
                            L    GK   +  V T T ++   F+ G    A+ +++ M ++
Sbjct: 307 VPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKE 366

Query: 291 NIQTDIVAYNVLINGFCLNG-----------------------------------DISSA 315
            +  + V YN LIN  C  G                                   DI  A
Sbjct: 367 GLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKA 426

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F +MLK G  P V+TYNTL+    K+G L+ A+ F  ++ ++   PD+ +Y  +I G
Sbjct: 427 MVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISG 486

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C  G +  A  F   ML+  + P    +  +IDGY + G +  A S+ + M   G S++
Sbjct: 487 FCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSAS 546

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           + T+NA+I   ++G    +A     +M   G+ P+  TY  LI   C     +LA +++ 
Sbjct: 547 IETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFH 606

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           EM ++   P+  TYT LI G C  G +  AE +
Sbjct: 607 EMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL 639



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 217/477 (45%), Gaps = 20/477 (4%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E +D L+ M + G     +E     +   I  LC  G++  A+ L R M +KG  P V T
Sbjct: 285 EAMDMLEEMTEKG-----IEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQT 339

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +  +++ L + G +E A  +  +M +    PN  TYNA I   C       AL +F  M 
Sbjct: 340 YTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWME 399

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS----Y 271
            +G   N  T+N ++  L     +  A+    ++L   DG + + V  +T+++++    Y
Sbjct: 400 GHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKML--KDGPSPTVVTYNTLIVENLKRGY 457

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
             N  +F  +     M + N + D   Y  LI+GFC  G + SA ++F +MLK G  P+ 
Sbjct: 458 LNNATRFLYM-----MKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQ 512

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            TY  +++  CK+GK+D A   +  + + G +    +Y  II GL       +A +F   
Sbjct: 513 WTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAK 572

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M E+ + P    +  +I+G  +    + AF I   M       N  T+ +LI    + G 
Sbjct: 573 MTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK 632

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           +  A  L +    +G  P + TY+ L+   C  G  + A QL + M  +G++P +  Y  
Sbjct: 633 VDAAERLTE----NGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCS 688

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           L+  HC    +  A E+F  +   G       +++L      +  +++A +I Q  L
Sbjct: 689 LLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLL 745



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 186/394 (47%), Gaps = 13/394 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ L     I  A+ +  KM++ G  P V+T+N L+ E  K G L  A   +  M E  
Sbjct: 413 IIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESN 472

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY   I+G+C+  +LD A   F  M   GI PN+ T+  ++   CK+G + D  
Sbjct: 473 CEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKI-DVA 531

Query: 244 KFLGEVLADDDGKA---TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
             L E + ++   A   T + I S +   + F   +KF A      M ++ +Q + + Y 
Sbjct: 532 LSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCA-----KMTEQGLQPNTITYT 586

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LING C N   + AF  F +M K+  LP+  TY +L+  LC++GK+D A      L++ 
Sbjct: 587 SLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAER----LTEN 642

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  P   +Y T++ GLC  G   +A + + +M EK + P   I+  ++  + +   +  A
Sbjct: 643 GCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCA 702

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             I +LM   G   ++F +  LI A        +A ++ + +L      D+  + +L+  
Sbjct: 703 LEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDG 762

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
               G   L ++    M  R  TP + TY  L +
Sbjct: 763 LLQEGDSDLCMKFLYLMESRNCTPSLHTYIILAR 796



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 176/377 (46%), Gaps = 3/377 (0%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           ++N  +    + + +  A ++++ + ++G++P+ +T N +++ LCKKG + +AV    ++
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
              D      D  T T L+  + +N    +A  +++ M +     + V Y+ LING C  
Sbjct: 224 FQFD---LCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNE 280

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G I  A     +M ++G  P V TY   ++ LC  G++D+A +    + K G +P   +Y
Sbjct: 281 GRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTY 340

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             II GL   G +  A      ML++ +VP    +N +I+     G    A  I D M  
Sbjct: 341 TAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEG 400

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G  +N  T+N +I        I  A  +  +ML DG  P V TYN LI  +   G+++ 
Sbjct: 401 HGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNN 460

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A +    M      PD  TY ELI G C  G +  A   F ++   G++ +   +  +  
Sbjct: 461 ATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMID 520

Query: 550 RYRRMKESDKARDIHQK 566
            Y +  + D A  + ++
Sbjct: 521 GYCKEGKIDVALSLFER 537



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 149/331 (45%), Gaps = 9/331 (2%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D R +  +I   C GGK+ +A     +M++ G  P+  T+  +++  CK G ++ A  
Sbjct: 474 EPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALS 533

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +   M E   S +  TYNA I+G  + N   +A    + M   G++PN +T+  L++ LC
Sbjct: 534 LFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLC 593

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K      A K   E+   +      +  T T L+    + G    A  L  +  +  I T
Sbjct: 594 KNTATNLAFKIFHEM---EKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDT 650

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
               Y+ L++G C  G  + A      M ++G  P +  Y +LL   CK  K+D A   +
Sbjct: 651 ----YSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIF 706

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
            +++  G  P    YK +I  LC      +A     S+L+K    +  +W V++DG  + 
Sbjct: 707 NLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQE 766

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           GD         LM S   + ++ T+  +ILA
Sbjct: 767 GDSDLCMKFLYLMESRNCTPSLHTY--IILA 795



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 125/257 (48%)

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           ++SA   + Q+   G  P ++T+NT++N LCK+GK+ EA   +  + +  + PD  +Y +
Sbjct: 178 VTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTS 237

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G C +  + KA E    M++    P    ++ +I+G    G +  A  + + M   G
Sbjct: 238 LILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKG 297

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +   V+T+   I +    G + DA +L + M   G  P V TY  +I      G + LA+
Sbjct: 298 IEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAI 357

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            +Y +ML+ G+ P+ +TY  LI   C  G    A ++F  ++  G   +   +  + K  
Sbjct: 358 GMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGL 417

Query: 552 RRMKESDKARDIHQKWL 568
             M + +KA  +  K L
Sbjct: 418 FGMDDIEKAMVVFNKML 434



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 135/306 (44%), Gaps = 7/306 (2%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++C +  +   + A+I   C  GKI  AL L  +M + G    + T+N +++ L K    
Sbjct: 504 LKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRF 563

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A+    +M+E    PN  TY + I G C+    + A  +F  M      PN  T+  L
Sbjct: 564 SEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSL 623

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           ++ LC++G +  A     E L ++  + T D  T + L+    + G   +A  L  +M +
Sbjct: 624 IYGLCQEGKVDAA-----ERLTENGCEPTID--TYSTLVSGLCREGRSNEASQLVENMKE 676

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K +   +  Y  L+   C +  +  A   F  M  +GF P +  Y  L+  LC   + +E
Sbjct: 677 KGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEE 736

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A + +  L K     D I +  ++ GL   GD     +FL  M  ++  P  H + ++  
Sbjct: 737 ALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILAR 796

Query: 410 GYGRCG 415
              + G
Sbjct: 797 ELSKVG 802


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 221/449 (49%), Gaps = 3/449 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ +C  GK+     L      KG VP+++ +N ++   CK+GD+E A  V +E+    
Sbjct: 211 MVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKG 270

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P   T+   I G+C+  +   +  L   +   G+R      N ++ A  + G   D  
Sbjct: 271 FMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPA 330

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + +  ++A+D      D+ T  IL++   K G K  A  L ++  +K +    ++Y  LI
Sbjct: 331 ESIRWIVAND---CKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLI 387

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
             +C + +   A     Q+ +RG  PD++TY  L++ L   G +D+A +    L   GV+
Sbjct: 388 QAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVS 447

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD   Y  ++ GLC  G  + A+     ML++S++P+ +++  +IDG+ R GD   A  +
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKV 507

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
             L +  GV  +V   NA+I    R G + +A +    M  + + PD FTY+ +I     
Sbjct: 508 FTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              +  A++++ +M +    P+++TYT LI G C +G+   AEE F ++Q+  L  + + 
Sbjct: 568 QQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVT 627

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLRNK 572
           +  L + + +   + +    + + ++ NK
Sbjct: 628 YTTLIRSFAKESSTLEKAVYYWELMMTNK 656



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 199/442 (45%), Gaps = 19/442 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  GK   A  L  +  +KG +   L++  L+   CK  + + A  ++ +++E  
Sbjct: 351 LINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERG 410

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY   I G      +D A+++   + + G+ P+   +N+L+  LCK G    A 
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAK 470

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+L   D     D      L+D + ++GD  +A  ++    +K ++ D+V +N +I
Sbjct: 471 LLFSEML---DRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMI 527

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            GFC +G +  A A   +M +   +PD  TY+T+++   KQ  +  A   +  + K    
Sbjct: 528 KGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCK 587

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR-CGDLSNAFS 422
           P+ ++Y ++I G C  GD   A E    M  + +VP    +  +I  + +    L  A  
Sbjct: 588 PNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVY 647

Query: 423 IRDLMLSFGVSSNVFTFNALI-----------LAETRG---GSIFDAFSLKKEMLLDGIF 468
             +LM++     N  TFN L+           L E  G   G  F  F     M  DG  
Sbjct: 648 YWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWS 707

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
                YN ++   C  G +  A  L D M+++G +PD +++  ++ G C  GN K+   +
Sbjct: 708 DHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNM 767

Query: 529 -FAKIQTLGLAIDHIPFRILKK 549
            F  +   GL +     R+L++
Sbjct: 768 DFRNLDEKGLEVAVRYSRVLEQ 789



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 158/361 (43%), Gaps = 7/361 (1%)

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
           C+++   +  +   NE++  L     + N  ++      + ++HA  + G L  AV+   
Sbjct: 102 CSSFLKLLARHRIFNEIEDVL---GNLRNENVKLTHEALSHVLHAYAESGFLSKAVEIYD 158

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
            V+   D  +  DVI    L+    K+     A  ++++M ++    D  +  +++ G C
Sbjct: 159 YVVELYD--SVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMC 216

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G +            +G +P+++ YNT++   CK G ++ A   +  L   G  P   
Sbjct: 217 SEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLE 276

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG-DLSNAFSIRDL 426
           ++ T+I G C  GD V +   L  + E+ +       N IID   R G  +  A SIR  
Sbjct: 277 TFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIR-W 335

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           +++     ++ T+N LI    + G    A  L  E    G+     +Y  LI A C    
Sbjct: 336 IVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKE 395

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
             +A +L  ++  RG  PDI+TY  LI G    G+M +A  +  K+   G++ D   + +
Sbjct: 396 YDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455

Query: 547 L 547
           L
Sbjct: 456 L 456



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/310 (22%), Positives = 137/310 (44%), Gaps = 18/310 (5%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   H A+I+  C  G +  AL    +M ++  VPD  T++ +++   K  D+  A 
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + R+M + +  PN  TY + I G+C   +   A   F  M +  + PN VT+  L+ + 
Sbjct: 576 KIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSF 635

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY--------------FKNGDKFQ 279
            K+    +   +  E++  +  K   + +T   L+  +              F +G  F 
Sbjct: 636 AKESSTLEKAVYYWELMMTN--KCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFL 693

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
               ++ M          AYN ++   C++G + +A     +M+K+GF PD +++  +L+
Sbjct: 694 FFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILH 753

Query: 340 CLCKQGKLDEASHF-YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             C  G   +  +  +  L + G+    + Y  +++       I +A   L +M+EK+  
Sbjct: 754 GFCVVGNSKQWRNMDFRNLDEKGLEV-AVRYSRVLEQHLPKAVICEASTILHAMVEKADT 812

Query: 399 PEPHIWNVII 408
            EP I  + +
Sbjct: 813 KEPEICRISV 822


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 209/405 (51%), Gaps = 3/405 (0%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           TA+ L ++M      PD  T N ++N  C  G +  A   + ++ ++   PN  T N  +
Sbjct: 76  TAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLM 135

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   ++ +AL     +   G R + +++ IL++ +CK G    A++ L  +   +  
Sbjct: 136 KGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRI---ERW 192

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               +V+  ++++D   K+    +A  L+ +M  K I  D+V Y++L++GFC+ G ++ A
Sbjct: 193 SIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRA 252

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                +M+     PD+ TY  L++ LCK+GK+ EA +   V+ K  V  D + Y T++ G
Sbjct: 253 IDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDG 312

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C+  ++  A+    +M +  V P+ H ++++I+G  +   +  A ++ + +    +  +
Sbjct: 313 YCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPD 372

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             T+ +LI    + G I   + L  EML  G  PDV TYN LI A C  GH+  A+ L++
Sbjct: 373 TVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFN 432

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           +M  + I P++ T+T L+ G C  G +K A E F  + T G  ++
Sbjct: 433 KMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLN 477



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 222/448 (49%), Gaps = 38/448 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +++ LCL GK+  AL    K++ +G     +++  L+N +CKIG+   A  ++R +   
Sbjct: 133 TLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERW 192

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   Y+  I   C+   +D+A  L++ M   GI P+ VT++ILV   C  G L  A
Sbjct: 193 SIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRA 252

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  L E++ ++      D+ T TIL+D+  K G   +A  +   M +  +  D+V Y+ L
Sbjct: 253 IDLLNEMVLEN---INPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTL 309

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+CL  ++++A   F  M + G  PDV  Y+ ++N LCK  ++DEA + +  + +  +
Sbjct: 310 MDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNM 369

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y ++I  LC  G I    +    ML++   P+   +N +ID   + G L  A +
Sbjct: 370 VPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIA 429

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M    +  NV+TF                      +LLDG+              C
Sbjct: 430 LFNKMKDQAIRPNVYTFT---------------------ILLDGL--------------C 454

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            +G +  AL+ + ++L +G   ++ TYT +I G C  G + EA  + ++++  G   D +
Sbjct: 455 KVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAV 514

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLR 570
            F I+ + +    E+DKA  + ++ + R
Sbjct: 515 TFEIMIRAFFDKDENDKAEKLVREMIAR 542



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 150/291 (51%), Gaps = 4/291 (1%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A++L+  M    ++ D    N++IN FC  G +  AF+   ++LK G+ P+ IT NTL+ 
Sbjct: 77  AISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMK 136

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LC +GK+ EA  F+  +   G     ISY  +I G+C  G+   A   L  +   S+ P
Sbjct: 137 GLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRP 196

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
              I+++IID   +   +  A+ +   M+  G+S +V T++ L+      G +  A  L 
Sbjct: 197 NVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLL 256

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            EM+L+ I PD++TY +L+ A C  G +  A  +   M++  +  D++ Y+ L+ G+C  
Sbjct: 257 NEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLV 316

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQK 566
             +  A+ VF  +  +G+  D   + I+     ++K  D+A     +IHQK
Sbjct: 317 NEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQK 367



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 147/285 (51%), Gaps = 3/285 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   +  ++  LC  GK+  A  +   M++     DV+ ++ L++  C + ++  A 
Sbjct: 264 INPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAK 323

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V   M++M  +P+   Y+  I G C++  +D+AL+LF  +    + P+ VT+  L+  L
Sbjct: 324 RVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCL 383

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G +        E+L   D     DVIT   L+D+  KNG   +A+AL+N M  + I+
Sbjct: 384 CKSGRISYVWDLFDEML---DRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIR 440

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++  + +L++G C  G + +A  +F  +L +G+  +V TY  ++N LCK+G LDEA   
Sbjct: 441 PNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALAL 500

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
              +   G   D ++++ +I+      +  KA + +  M+ + ++
Sbjct: 501 QSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 114/242 (47%), Gaps = 3/242 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V+  +  D   +  ++   CL  ++  A  +   M Q G  PDV  ++ ++N LCKI  +
Sbjct: 295 VKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRV 354

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A ++  E+ +    P+  TY + I   C+   +     LF  M + G  P+ +T+N L
Sbjct: 355 DEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNL 414

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           + ALCK G L  A+    ++    D     +V T TIL+D   K G    AL  + D+  
Sbjct: 415 IDALCKNGHLDRAIALFNKM---KDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLT 471

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K    ++  Y V+ING C  G +  A A   +M   G + D +T+  ++     + + D+
Sbjct: 472 KGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDK 531

Query: 350 AS 351
           A 
Sbjct: 532 AE 533



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 113/268 (42%), Gaps = 35/268 (13%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A++ +N MF  +       +N ++          +A + + QM      PD  T N ++N
Sbjct: 42  AVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIIN 101

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           C C  G++  A      + K G  P+ I+  T+++GLC+ G + +A  F   +L +    
Sbjct: 102 CFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRL 161

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               + ++I+G  + G                              ETR      A  L 
Sbjct: 162 SGISYGILINGVCKIG------------------------------ETRA-----AIRLL 186

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           + +    I P+V  Y+++I   C    +  A  LY EM+ +GI+PD++TY+ L+ G C  
Sbjct: 187 RRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIV 246

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           G +  A ++  ++    +  D   + IL
Sbjct: 247 GQLNRAIDLLNEMVLENINPDIYTYTIL 274



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 103/245 (42%), Gaps = 2/245 (0%)

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           FLP++  ++  L  L      D+A   +  +      P    +  I+  L        A 
Sbjct: 21  FLPNLCFHSHSLPPLTHNA--DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAI 78

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
                M    V P+    N+II+ +   G +  AFS    +L  G   N  T N L+   
Sbjct: 79  SLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGL 138

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + +A     ++L  G      +Y +LI   C +G    A++L   + R  I P++
Sbjct: 139 CLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNV 198

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           + Y+ +I   C    + EA +++ ++   G++ D + + IL   +  + + ++A D+  +
Sbjct: 199 VIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNE 258

Query: 567 WLLRN 571
            +L N
Sbjct: 259 MVLEN 263


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 197/400 (49%), Gaps = 12/400 (3%)

Query: 119 RRHVAVIRDLCLG-----GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           RR +++   +C G          A     +++  G  P+    N L+ +  ++G+L  A 
Sbjct: 147 RRGISLPAPVCSGLMSRLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSAR 206

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V  EM      P   T+N  I+G CR  +LD    L+  M++ G++P+  T+  L+   
Sbjct: 207 KVFDEMRRSV-QPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGF 265

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C+ G + +AVK   E+    D     + +  T L+D++ K G+    + L+ DM  + + 
Sbjct: 266 CRTGRMENAVKMFNEM---RDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVM 322

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+VAYN L+NG C   ++ +A +   +M   G  PD +TY TL++  CK GKLD A   
Sbjct: 323 PDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDI 382

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +++  V+ D+++Y  +I GL   G  V A   L  M+E ++ P+   + ++ID + R
Sbjct: 383 KQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCR 442

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            GD+   F +   M + G    V T+N ++    + G + +A  L   ML  G+ PD  T
Sbjct: 443 KGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDIT 502

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           YN+L+   C  G +  + +L      +G+ PD   YT LI
Sbjct: 503 YNILLDGQCKHGKVANSEELESS---KGMVPDFAVYTSLI 539



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 162/363 (44%), Gaps = 39/363 (10%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           +P    +N  +  + R+ EL  A  +F  M    ++P  VT N L+  +C+   L DAV 
Sbjct: 183 APETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCRARDL-DAV- 239

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
                    DG                           L+ +M    ++ D+  Y  LI 
Sbjct: 240 ---------DG---------------------------LYKEMSDVGVKPDVYTYGALIK 263

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           GFC  G + +A   F +M   G  P+ + + TL++  CK+G ++     Y  +   GV P
Sbjct: 264 GFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMP 323

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D ++Y  ++ GLC   ++  A   +  M    + P+   +  +IDG  + G L  A  I+
Sbjct: 324 DLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIK 383

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
             M    VS +  T+ ALI   ++ G   DA  + +EM+   + PD  TY ++I A C  
Sbjct: 384 QKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRK 443

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G +    +L  EM  +G  P ++TY  ++ G C  G MK A+ +   +  +G++ D I +
Sbjct: 444 GDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITY 503

Query: 545 RIL 547
            IL
Sbjct: 504 NIL 506



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 150/307 (48%), Gaps = 11/307 (3%)

Query: 102 KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           K M D G     ++ D   + A+I+  C  G++  A+ +  +M   G  P+ +    L++
Sbjct: 244 KEMSDVG-----VKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLID 298

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP 221
             CK G++     + ++M      P+   YNA + G CR   L  A  +   M N G++P
Sbjct: 299 AHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKP 358

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           ++VT+  L+   CK G L D    + + +A+ +   + D +T T L+    K G    A 
Sbjct: 359 DKVTYTTLIDGCCKDGKL-DMAMDIKQKMAEKE--VSLDEVTYTALISGLSKAGRPVDAE 415

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            +  +M +  ++ D   Y ++I+ FC  GD+ + F    +M  +G  P V+TYN ++N L
Sbjct: 416 RVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGL 475

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK G++  A      +   GV+PD I+Y  ++ G C HG +  + E   S   K +VP+ 
Sbjct: 476 CKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESS---KGMVPDF 532

Query: 402 HIWNVII 408
            ++  +I
Sbjct: 533 AVYTSLI 539



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 91/178 (51%), Gaps = 4/178 (2%)

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A  F L +L+  + PE  ++NV++  + R G+L +A  + D M    V   V TFN LI
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLI 227

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               R   +     L KEM   G+ PDV+TY  LI   C  G +  A+++++EM   G+ 
Sbjct: 228 SGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVN 287

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKESD 558
           P+ + +T LI  HC  GN+    +++  ++  G+  D + +  L     R R +K ++
Sbjct: 288 PNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAE 345



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 41/231 (17%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  +I   C  GK+  A+ +++KM +K    D +T+  L++ L K G    A+
Sbjct: 356 LKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAE 415

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V+REM E    P+  TY   I  +CR  ++     L   M N G +P  VT+N++++ L
Sbjct: 416 RVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGL 475

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G +                                 KN D      L + M    + 
Sbjct: 476 CKLGQM---------------------------------KNAD-----MLLHAMLNIGVS 497

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
            D + YN+L++G C +G ++++         +G +PD   Y +L++ L K+
Sbjct: 498 PDDITYNILLDGQCKHGKVANSEELESS---KGMVPDFAVYTSLISELAKK 545



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 1/158 (0%)

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           R      A++    +L  G++     FN L+    R G +  A  +  EM    + P V 
Sbjct: 163 RLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVV 221

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           T+N LI   C    +     LY EM   G+ PD+ TY  LIKG C  G M+ A ++F ++
Sbjct: 222 TFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEM 281

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +  G+  + + F  L   + +    +   D++Q   +R
Sbjct: 282 RDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVR 319


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 206/404 (50%), Gaps = 3/404 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++  A     +M ++G V +V+T +  V+  CK G +++A  +  +M      PN  TY
Sbjct: 284 GRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTY 343

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
            + + G C+   LD A+ L   M + G+ PN VT+ ++V  LCK+G + +A   L  +  
Sbjct: 344 TSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLM-- 401

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            + G   ++ +  T L+  +F N +  +AL L N M  K ++ D+  Y  LI G C +  
Sbjct: 402 -ERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQK 460

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A +   +M   G  P+ + Y T+++ L K GK  EA      +  +G  P+ ++Y  
Sbjct: 461 VDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCA 520

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC  G I +A      M E  + P    +  +IDG+ + G L+ A  + + M+  G
Sbjct: 521 LIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKG 580

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +S +   + +LI    +  ++ DAF+LK +M+  G+  D++ Y   I   CN+  +  A 
Sbjct: 581 MSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEAR 640

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            +  EM+  GITPD   Y  LI+ +   GNM+EA  +  +++++
Sbjct: 641 GVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMESV 684



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 220/459 (47%), Gaps = 38/459 (8%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L R++     VP+V T N +++ LCK G+L +A  +   M  M  SP+  TYN+ I GY 
Sbjct: 187 LVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYG 246

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +  +L++   L S M  +G   + VT+N L++   K G +  A  + GE+         +
Sbjct: 247 KCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEM---KRQGVVA 303

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +V+T +  +D++ K G   +A+ L+  M  + +  +   Y  L++G C  G +  A    
Sbjct: 304 NVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLL 363

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ----- 374
            +M+ +G +P+V+TY  +++ LCK+GK+ EA +   ++ + GV  +++ Y T+I      
Sbjct: 364 DEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMN 423

Query: 375 ------------------------------GLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
                                         GLC    + +A+  L  M    + P   I+
Sbjct: 424 NNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIY 483

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
             I+D   + G  S A ++   +L  G   NV T+ ALI    + GSI +A S   +M  
Sbjct: 484 TTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRE 543

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            G+ P+V  Y  LI   C +G ++ A+ L +EM+ +G++ D + YT LI G+  + N+++
Sbjct: 544 LGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQD 603

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           A  +  K+   GL +D   +      +  M    +AR +
Sbjct: 604 AFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGV 642



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 204/436 (46%), Gaps = 3/436 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +     L  +M + G   DV+T+N L+N   K G +EKA     EM       N  T+
Sbjct: 249 GDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTF 308

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           + F+  +C+   + +A+ LF+ M   G+ PN  T+  LV   CK G L DA+  L E++ 
Sbjct: 309 STFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH 368

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   +V+T T+++D   K G   +A  + + M +  ++ + + Y  LI+G  +N +
Sbjct: 369 QG---LVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNN 425

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A     QM  +G   DV  Y TL+  LCK  K+DEA      ++  G+ P+ + Y T
Sbjct: 426 SERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTT 485

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           I+  L   G   +A   L  +L+    P    +  +IDG  + G +S A S  + M   G
Sbjct: 486 IMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELG 545

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  NV  + ALI    + GS+  A  L  EM+  G+  D   Y  LI       ++  A 
Sbjct: 546 LDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAF 605

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            L  +M+  G+  D+  YT  I G C    M+EA  V +++   G+  D   +  L ++Y
Sbjct: 606 ALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKY 665

Query: 552 RRMKESDKARDIHQKW 567
           +++   ++A  +  + 
Sbjct: 666 QKLGNMEEASSLQNEM 681



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 185/370 (50%), Gaps = 8/370 (2%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +++E +     MR    VR  +  ++  + +++   C  G++  A+ L  +M+ +G VP+
Sbjct: 320 LVQEAMKLFAQMR----VRGMMPNEFT-YTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPN 374

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V+T+  +V+ LCK G + +AD+V+  M       N   Y   I G+   N  ++AL L +
Sbjct: 375 VVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLN 434

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M N G+  +   +  L+  LCK   + +A   L ++     G   + VI +TI MD+ F
Sbjct: 435 QMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAG--CGLRPNTVIYTTI-MDALF 491

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G + +A+AL + +     Q ++V Y  LI+G C  G IS A ++F +M + G  P+V 
Sbjct: 492 KAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQ 551

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            Y  L++  CK G L++A H    +   G++ D++ Y ++I G     ++  A      M
Sbjct: 552 AYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKM 611

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +E  +  + + +   I G+     +  A  +   M+  G++ +   +N LI    + G++
Sbjct: 612 IESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNM 671

Query: 453 FDAFSLKKEM 462
            +A SL+ EM
Sbjct: 672 EEASSLQNEM 681



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 29/368 (7%)

Query: 227 NILVHALCKKGLLGDAVKFLGEV------------------LADD----------DGKAT 258
           + L+  L   GLL DAV+ L  V                  LA +          D    
Sbjct: 138 DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPV 197

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            +V T  I++D   K G+  +A AL+  M       D+V YN LI+G+   GD+      
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             +M K G   DV+TYN L+NC  K G++++A  ++G + + GV  + +++ T +   C 
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G + +A +    M  + ++P    +  ++DG  + G L +A  + D M+  G+  NV T
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +  ++    + G + +A ++   M   G+  +   Y  LI       +   AL L ++M 
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMK 437

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF-RILKKRYRRMKES 557
            +G+  D+  Y  LI G C    + EA+ +  K+   GL  + + +  I+   ++  KES
Sbjct: 438 NKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKES 497

Query: 558 DKARDIHQ 565
           +    +H+
Sbjct: 498 EAVALLHK 505


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 194/411 (47%), Gaps = 10/411 (2%)

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
           +WL  +M ++      +T+N L+N   K G +E+A     +M          ++N  I G
Sbjct: 296 IWL--EMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEG 353

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
           YC+    D+A  +   M N GI P   T+NI + ALC+ G + DA + L  +       A
Sbjct: 354 YCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM-------A 406

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
             DV++   LM  Y K     +A  L++D+   NI   IV YN LI+G C +G++  A  
Sbjct: 407 APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQR 466

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
              +M  +   PDVITY TLL    K G L  A+  Y  + + G+ PD  +Y T   G  
Sbjct: 467 LKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGEL 526

Query: 378 IHGDIVKAREFLLSML-EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
             GD  KA      M+ E    P+  I+NV IDG  + G+L  A   +  +   G+  + 
Sbjct: 527 RLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDH 586

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+  +I      G    A  L  EML   + P V TY +LI      G +  A Q   E
Sbjct: 587 VTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTE 646

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           M +RG+ P+++T+  L+ G C  GN+ EA     K++  G++ +   + IL
Sbjct: 647 MKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTIL 697



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 193/392 (49%), Gaps = 8/392 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G    A  +  +M+  G  P   T+N  +  LC+ G ++ A  ++  M+   
Sbjct: 350 LIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMA--- 406

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  +YN  + GY ++ +  +A  LF  +    I P+ VT+N L+  LC+ G L  A 
Sbjct: 407 -APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQ 465

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+ +        DVIT T L+  + KNG+   A  ++++M +K I+ D  AY    
Sbjct: 466 RLKEEMTSQ---LIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRT 522

Query: 304 NGFCLNGDISSAFAYFCQMLKRGF-LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            G    GD   AF    +M+      PD+  YN  ++ LCK G L++A  F   + + G+
Sbjct: 523 VGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGL 582

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y T+I+G    G    AR+    ML K + P    + V+I G+ + G L  AF 
Sbjct: 583 VPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQ 642

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
               M   GV  NV T NAL+    + G+I +A+    +M  +GI P+ ++Y +LI   C
Sbjct: 643 YSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHC 702

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           +L      ++LY EML + I PD  T+  L K
Sbjct: 703 DLDKWEEVVKLYKEMLDKEIEPDGYTHRALFK 734



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 183/407 (44%), Gaps = 43/407 (10%)

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
           Y + +  +K L  F  M   G  P+    NI++  L    ++  A +    ++       
Sbjct: 214 YTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHG---I 270

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
              VIT   ++DS FK GD  +   +W +M ++NI+   V YN+LINGF  +G +  A  
Sbjct: 271 MPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARR 330

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
           +   M + GF     ++N L+   CKQG  DEA      +   G+ P   +Y   I+ LC
Sbjct: 331 FHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALC 390

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G I  ARE L SM    VV     +N ++ GY +      A  + D + +  ++ ++ 
Sbjct: 391 EFGRIDDARELLSSMAAPDVVS----YNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIV 446

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T+N LI      G++  A  LK+EM    I+PDV TY  L+      G++ +A ++YDEM
Sbjct: 447 TYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEM 506

Query: 498 LRRGITPDIITYT-----EL-------------------------------IKGHCARGN 521
           LR+GI PD   YT     EL                               I G C  GN
Sbjct: 507 LRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGN 566

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +++A E   KI  +GL  DH+ +  + + Y        ARD++ + L
Sbjct: 567 LEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEML 613



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 65/140 (46%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L  D+  +  VIR     G+   A  L  +M+ K   P V+T+  L++   K G LE
Sbjct: 579 RVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLE 638

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A     EM +    PN  T+NA + G C+   +D+A      M   GI PN+ ++ IL+
Sbjct: 639 QAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILI 698

Query: 231 HALCKKGLLGDAVKFLGEVL 250
              C      + VK   E+L
Sbjct: 699 SKHCDLDKWEEVVKLYKEML 718


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 212/439 (48%), Gaps = 3/439 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G    A  + ++M+  G  P+ +T++ LV  LCK+G +++A  ++++M      P+  TY
Sbjct: 341 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 400

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I G+ R +    A  L S M N GI PN  T++I++H LC+ G    A   L E+  
Sbjct: 401 NLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT 460

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   +      L+  Y + G+   A  +++ M + N+  D+  YN LI G    G 
Sbjct: 461 KG---LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 517

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  +  YF QM +RG LP+  TY+ L++   K G L+ A      +  TG+ P+ + Y  
Sbjct: 518 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 577

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +++      DI K      SML++ V+ +  I+ ++I      G++  AF +   +   G
Sbjct: 578 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 637

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              +V  +++LI    +      AF +  EM   G+ P++  YN LI   C  G I  A 
Sbjct: 638 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 697

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            +++ +L +G+ P+ +TYT LI G C  G++  A  ++ ++   G+  D   + +L    
Sbjct: 698 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGC 757

Query: 552 RRMKESDKARDIHQKWLLR 570
               + ++A  + ++  LR
Sbjct: 758 SSAGDLEQAMFLIEEMFLR 776



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 232/504 (46%), Gaps = 43/504 (8%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  MR+ G   C L T    +  +I  LC  G +  A   ++ M   G VPD  T+  L+
Sbjct: 245 LVEMRERG---CGLNT--VTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALI 299

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           N LCK     +A  ++ EMS     PN   Y   I G+ R    D+A  +   M   G++
Sbjct: 300 NGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ 359

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLAD---------------------------- 252
           PN++T++ LV  LCK G +  A   L +++ D                            
Sbjct: 360 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRL 419

Query: 253 ----DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
               ++   + +V T +I++    ++G+  +A  L  +M  K ++ +   Y  LI+G+C 
Sbjct: 420 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 479

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G++S A   F +M K   LPD+  YN+L+  L K G+++E++ ++  + + G+ P++ +
Sbjct: 480 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 539

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I G   +GD+  A + +  ML+  + P   I+  +++ Y +  D+    S    ML
Sbjct: 540 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 599

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             GV  +   +  LI   +  G++  AF +   +  +G  PDV  Y+ LI   C      
Sbjct: 600 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADRE 659

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A  + DEM ++G+ P+I+ Y  LI G C  G++  A  VF  I   GL  + + +  L 
Sbjct: 660 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL- 718

Query: 549 KRYRRMKESDKARDIHQKWLLRNK 572
                +  S K  DI   + L N+
Sbjct: 719 -----IDGSCKVGDISNAFYLYNE 737



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 205/428 (47%), Gaps = 7/428 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A  L  +M   G  P+V T++ +++ LC+ G+ EKA  ++ EM+     PN   Y   I+
Sbjct: 416 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 475

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           GYCR   +  A  +F  M    + P+   +N L+  L K G + ++ K+  ++    +  
Sbjct: 476 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM---QERG 532

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              +  T + L+  Y KNGD   A  L   M    ++ + V Y  L+  +  + DI    
Sbjct: 533 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 592

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           + F  ML +G + D   Y  L++ L   G ++ A      + K G  PD   Y ++I GL
Sbjct: 593 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 652

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C   D  KA   L  M +K V P    +N +IDG  + GD+S A ++ + +L+ G+  N 
Sbjct: 653 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 712

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+ +LI    + G I +AF L  EML  GI PD F Y++L     + G +  A+ L +E
Sbjct: 713 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 772

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M  RG    I ++  L+ G C RG M+E  ++   I   GL  + +    ++     + E
Sbjct: 773 MFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL---TIENIISGLSE 828

Query: 557 SDKARDIH 564
           + K  ++H
Sbjct: 829 AGKLSEVH 836



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 210/455 (46%), Gaps = 57/455 (12%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G+   A  L  +M  KG  P+   +  L++  C+ G++  A  +  +M+++ 
Sbjct: 438 MIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 497

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   YN+ I G  +V  ++++   F+ M   G+ PN  T++ L+H   K G L  A 
Sbjct: 498 VLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAE 557

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + +  +L  D G   +DVI    L++SYFK+ D  +  + +  M  + +  D   Y +LI
Sbjct: 558 QLVQRML--DTGLKPNDVIYID-LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILI 614

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +    +G++ +AF     + K G +PDV  Y++L++ LCK    ++A      +SK GV 
Sbjct: 615 HNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 674

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ + Y  +I GLC  GDI  AR    S+L K +VP    +  +IDG  + GD+SNAF +
Sbjct: 675 PNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYL 734

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + ML+ G++ + F ++ L    +  G +  A  L +EM L G    + ++N L+   C 
Sbjct: 735 YNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCK 793

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKG---------------------------- 515
            G +   L+L   ++ RG+ P+ +T   +I G                            
Sbjct: 794 RGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARH 853

Query: 516 -------------------------HCARGNMKEA 525
                                    HC  GN+ +A
Sbjct: 854 FSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKA 888



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 172/378 (45%), Gaps = 38/378 (10%)

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           + + +  YC+V E D A  +   M   G   N VT+N+L+  LC+ G    AV+      
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG----AVE------ 274

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                                       +A     DM    +  D   Y  LING C + 
Sbjct: 275 ----------------------------EAFGFKKDMEDYGLVPDGFTYGALINGLCKSR 306

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
             + A A   +M      P+V+ Y  L++   ++G  DEA      +   GV P++I+Y 
Sbjct: 307 RSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYD 366

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +++GLC  G + +A   L  M+  S  P+   +N+II+G+ R     +AF +   M + 
Sbjct: 367 NLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENA 426

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+S NV+T++ +I    + G    A  L +EM   G+ P+ F Y  LI   C  G++ LA
Sbjct: 427 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 486

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
            +++D+M +  + PD+  Y  LI G    G ++E+ + FA++Q  GL  +   +  L   
Sbjct: 487 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 546

Query: 551 YRRMKESDKARDIHQKWL 568
           Y +  + + A  + Q+ L
Sbjct: 547 YLKNGDLESAEQLVQRML 564



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 185/406 (45%), Gaps = 42/406 (10%)

Query: 75  KDSDNEGNPQAVFNALDLILKEN----LDRLKTM---RDTGPVRCTLET--------DYR 119
           K+ D E   Q V   LD  LK N    +D L++     D   V  T ++        D R
Sbjct: 549 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNR 608

Query: 120 RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
            +  +I +L   G +  A  +   + + G+VPDV  ++ L++ LCK  D EKA  ++ EM
Sbjct: 609 IYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 668

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
           S+    PN   YNA I G C+  ++  A ++F+++   G+ PN VT+  L+   CK G +
Sbjct: 669 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDI 728

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +A     E+LA      T D    ++L       GD  QA+ L  +MF +     I ++
Sbjct: 729 SNAFYLYNEMLATG---ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSF 784

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N L++GFC  G +         ++ RG +P+ +T   +++ L + GKL E          
Sbjct: 785 NNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEV--------- 835

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREF---LLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
                      TI   L        AR F    + M+ +  +P   + ++I D + + G+
Sbjct: 836 ----------HTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRD-HCKEGN 884

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
           L  A  +RD++++        ++ A++    R G + +A +L KEM
Sbjct: 885 LDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 930



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/298 (21%), Positives = 122/298 (40%), Gaps = 57/298 (19%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + ++I  LC       A  +  +M +KG  P+++ +N L++ LCK GD+  A +V 
Sbjct: 641 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 700

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             +      PNC TY + I G C+V ++  A +L++ M   GI P+   +++L       
Sbjct: 701 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 760

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A+  + E+      +  + + +   L+D + K G   + L L + +  + +  + 
Sbjct: 761 GDLEQAMFLIEEMFL----RGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNA 816

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQ-------------------MLKRGFLP-------- 329
           +    +I+G    G +S     F +                   M+ +G +P        
Sbjct: 817 LTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMI 876

Query: 330 ----------------DVI----------TYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
                           DVI          +Y  +++ LC++GKL EA +    + K G
Sbjct: 877 RDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 214/447 (47%), Gaps = 8/447 (1%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           +L   E LD    M  + P+   +  D+ R ++VI  +    +    + L  +M   G  
Sbjct: 60  NLQFNEALDLFTRMVHSRPLPSIV--DFTRLLSVIAKM---KRFDVVISLFEQMQILGIS 114

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P + T N ++N +C+     +A   + +M ++   P+  T+ + + G+C  N ++ AL L
Sbjct: 115 PVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALAL 174

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  +   G RPN VT+  L+H LCK   L  AV+   ++    D     +V+T   L+  
Sbjct: 175 FDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQM---GDNGIRPNVVTYNSLVSG 231

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             + G    A  L  DM ++ IQ +++ +  LI+ F   G I  A   +  M++    PD
Sbjct: 232 LCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPD 291

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V TY  L+N LC  G+LDEA   + ++   G  P++++Y T+I G C    +    +   
Sbjct: 292 VFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFY 351

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M +K +V     + V+I GY   G    A  + + M S     ++ T+N L+      G
Sbjct: 352 EMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNG 411

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +  A  + K M    +  ++ TY ++I   C +G +  A  L+  +  +G+ P++ITYT
Sbjct: 412 YVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYT 471

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGL 537
            +I G C RG + EA+ +F K++  G 
Sbjct: 472 TMISGFCRRGFIHEADALFKKMKEDGF 498



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 182/363 (50%), Gaps = 3/363 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM++ G  PD++T   L++  C    +E A  +  ++  M   PN  TY   I   C+  
Sbjct: 142 KMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNR 201

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            L+ A+ +F+ M +NGIRPN VT+N LV  LC+ G   DA   L +++         +VI
Sbjct: 202 HLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRG---IQPNVI 258

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T T L+D++ K G   +A  L+  M Q ++  D+  Y  LING C  G +  A   F  M
Sbjct: 259 TFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLM 318

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
              G+ P+ +TY TL++  CK  ++++ +  +  +S+ G+  + I+Y  +IQG C+ G  
Sbjct: 319 ESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRP 378

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A+E    M  +   P+   +NV++DG    G +  A  I   M    +  N+ T+  +
Sbjct: 379 DVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTII 438

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    + G + DAF L   +   G+ P+V TY  +I   C  G IH A  L+ +M   G 
Sbjct: 439 IQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGF 498

Query: 503 TPD 505
            P+
Sbjct: 499 LPN 501



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 141/281 (50%), Gaps = 3/281 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  LC  G+   A WL R M+++G  P+V+T   L++   K+G + +A  + + M +M
Sbjct: 227 SLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQM 286

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY A I G C    LD+A  +F  M +NG  PN VT+  L+H  CK   + D 
Sbjct: 287 SVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDG 346

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   E+         ++ IT T+L+  Y   G    A  ++N M  +    DI  YNVL
Sbjct: 347 TKIFYEM---SQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVL 403

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G C NG +  A   F  M KR    +++TY  ++  +CK GK+++A   +  L   G+
Sbjct: 404 LDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGM 463

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            P+ I+Y T+I G C  G I +A      M E   +P   +
Sbjct: 464 KPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 203/434 (46%), Gaps = 23/434 (5%)

Query: 135 GTALWLR-----RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCA 189
           G   W+R     RK+++ G       HN   NE         A  +   M   RP P+  
Sbjct: 39  GFCFWIRAFSNYRKILRNGL------HNLQFNE---------ALDLFTRMVHSRPLPSIV 83

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            +   ++   ++   D  + LF  M   GI P   T NI+++ +C+      A  FLG++
Sbjct: 84  DFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKM 143

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +         D++T T L+  +        ALAL++ +     + ++V Y  LI+  C N
Sbjct: 144 MKLG---FEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKN 200

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
             ++ A   F QM   G  P+V+TYN+L++ LC+ G+  +A+     + K G+ P+ I++
Sbjct: 201 RHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITF 260

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             +I      G I++A+E    M++ SV P+   +  +I+G    G L  A  +  LM S
Sbjct: 261 TALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMES 320

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G   N  T+  LI    +   + D   +  EM   G+  +  TY +LI   C +G   +
Sbjct: 321 NGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDV 380

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A +++++M  R   PDI TY  L+ G C  G +++A  +F  ++   + I+ + + I+ +
Sbjct: 381 AQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQ 440

Query: 550 RYRRMKESDKARDI 563
              ++ + + A D+
Sbjct: 441 GMCKVGKVEDAFDL 454



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/257 (20%), Positives = 108/257 (42%), Gaps = 35/257 (13%)

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           N   + A   F +M+    LP ++ +  LL+ + K  + D     +  +   G++P   +
Sbjct: 60  NLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYT 119

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
              ++  +C      +A  FL                      G+             M+
Sbjct: 120 CNIVMNCVCRSSQPCRASCFL----------------------GK-------------MM 144

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G   ++ TF +L+        I DA +L  +++  G  P+V TY  LI   C   H++
Sbjct: 145 KLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLN 204

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A++++++M   GI P+++TY  L+ G C  G   +A  +   +   G+  + I F  L 
Sbjct: 205 HAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALI 264

Query: 549 KRYRRMKESDKARDIHQ 565
             + ++ +  +A+++++
Sbjct: 265 DAFVKVGKIMEAKELYK 281



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 53/106 (50%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D R +  ++  LC  G +  AL + + M ++    +++T+  ++  +CK+G +E A  + 
Sbjct: 396 DIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLF 455

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
             +      PN  TY   I+G+CR   + +A  LF  M  +G  PN
Sbjct: 456 CSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 206/456 (45%), Gaps = 67/456 (14%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L ++M+  G  P +LT N L+N L K G + +A+ ++ ++ +   SP+  TY + I G+C
Sbjct: 185 LYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHC 244

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT- 258
           R   LD A  +F  M   G  PN VT++ L++ LC +G + +A+  L E++         
Sbjct: 245 RNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVY 304

Query: 259 -------------------------------SDVITSTILMDSYFKNGDKFQALALWNDM 287
                                           +V T T L+    + G    A+ L++ M
Sbjct: 305 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 364

Query: 288 FQKNIQTDIVAYNVLIN-----------------------------------GFCLNGDI 312
            ++ +  + V YN LIN                                   G CL GDI
Sbjct: 365 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 424

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A   F +MLK G LP V+TYNTL+N    +G ++ A+    ++ + G  PD+ +Y  +
Sbjct: 425 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNEL 484

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           + G    G +  A  +   M+E  + P P  +  +IDG+ + G +  A S+   M   G 
Sbjct: 485 VSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGC 544

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           + NV ++NA+I   ++     +A  +  +M+  G+ P+V TY  LI   C  G    A +
Sbjct: 545 NPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFK 604

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           ++ +M +R   P++ TY+ LI G C  G   EAE +
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERM 640



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 207/448 (46%), Gaps = 42/448 (9%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I +LC+GG+  TAL +   M   G++ +  T+N ++  LC  GD+EKA  +  +M +M
Sbjct: 378 ALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM 437

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
            P P   TYN  I GY     ++ A  L   M  NG  P+  T+N LV    K G L  A
Sbjct: 438 GPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESA 497

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW------------------ 284
             +  E++   +     + ++ T L+D + K+G    AL+L                   
Sbjct: 498 SFYFQEMV---ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAV 554

Query: 285 -----------------NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
                            + M ++ +  +++ Y  LI+G C NG    AF  F  M KR  
Sbjct: 555 INGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 614

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           LP++ TY++L+  LC++GK DEA      +S+ G  P   +Y T++ GLC  G   +A +
Sbjct: 615 LPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQ 670

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            +  M E+   P+  I+  ++  + +  ++ +A  I   + + G   ++  + ALI A  
Sbjct: 671 LVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALC 730

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G + +A +L   ML      D   + +L+      G + L ++L   M  +  TP+I 
Sbjct: 731 KAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQ 790

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTL 535
           TY  L +     G   E+E +  K++ L
Sbjct: 791 TYVILGRELSRIGKSIESEPLADKLKVL 818



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 204/431 (47%), Gaps = 7/431 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           + + + A+I  L   GK+  A+ L  KM+++G VP+ +T+N L+NELC  G    A  + 
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 396

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M       N  TYN  I G C   +++KA+ LF  M   G  P  VT+N L++    K
Sbjct: 397 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 456

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A + L   L  ++G    D  T   L+  + K G    A   + +M +  +  + 
Sbjct: 457 GNVNNAARLLD--LMKENG-CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 513

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V+Y  LI+G   +G +  A +   +M + G  P+V +YN ++N L K+ +  EA      
Sbjct: 514 VSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 573

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + + G+ P+ I+Y T+I GLC +G    A +    M ++  +P  + ++ +I G  + G 
Sbjct: 574 MVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
              A    + M   G    + T++ L+    R G  ++A  L K+M   G  PD   Y  
Sbjct: 634 ADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYS 689

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L+ A C    +  AL+++  +  +G    +  Y  LI   C  G ++EA+ +F  +    
Sbjct: 690 LLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKE 749

Query: 537 LAIDHIPFRIL 547
              D I + +L
Sbjct: 750 WNADEIVWTVL 760



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 177/380 (46%), Gaps = 3/380 (0%)

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           ++ +    + E+S M    +  + N  +    +   ++ A +L+  M N+GI+P+ +T N
Sbjct: 143 EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFN 202

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            L++ L KKG + +A   L ++   D    + DV T T L+  + +N +   A  +++ M
Sbjct: 203 TLINILSKKGKVREAELILSQIFQYD---LSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 259

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            ++    + V Y+ LING C  G +  A     +M+++G  P V TY   +  LC     
Sbjct: 260 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 319

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           +EA      + K G  P+  +Y  +I GL   G +  A      ML++ +VP    +N +
Sbjct: 320 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 379

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I+     G  S A  I   M   G  +N  T+N +I     GG I  A  L ++ML  G 
Sbjct: 380 INELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 439

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            P V TYN LI      G+++ A +L D M   G  PD  TY EL+ G    G ++ A  
Sbjct: 440 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 499

Query: 528 VFAKIQTLGLAIDHIPFRIL 547
            F ++   GL  + + +  L
Sbjct: 500 YFQEMVECGLNPNPVSYTAL 519



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 145/353 (41%), Gaps = 42/353 (11%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V C L  +   + A+I      GK+  AL L ++M + G  P+V ++N ++N L K    
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRF 564

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A+ +  +M E    PN  TY   I G CR      A  +F  M      PN  T++ L
Sbjct: 565 SEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           ++ LC++G               D+ +  S++                            
Sbjct: 625 IYGLCQEG-------------KADEAERMSEI---------------------------- 643

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
              +  +  Y+ L++G C  G    A      M +RGF PD   Y +LL   CK  ++D 
Sbjct: 644 -GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDH 702

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   +  +   G       Y+ +I  LC  G + +A+    +MLEK    +  +W V++D
Sbjct: 703 ALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVD 762

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
           G  + G+L     +  +M S   + N+ T+  L    +R G   ++  L  ++
Sbjct: 763 GLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 815



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 105/225 (46%)

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
           + ++   + F   +S  G      S  T++  L     +  AR     ML   + P    
Sbjct: 141 EEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLT 200

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N +I+   + G +  A  I   +  + +S +VFT+ +LIL   R  ++  AF +   M+
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV 260

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
            +G  P+  TY+ LI   CN G +  AL + +EM+ +GI P + TYT  I   CA  + +
Sbjct: 261 KEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 320

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           EA E+ A+++  G   +   +  L     R+ + + A  ++ K L
Sbjct: 321 EAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 365


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 222/474 (46%), Gaps = 44/474 (9%)

Query: 88  NALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           + LD +L EN  ++         R  +E +   +  +++ LC   ++  A  L  +M  K
Sbjct: 148 HVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYK 207

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G +PD +++  +V+ +C++G +E+A    RE+S MR       YNA I G+CR +++++ 
Sbjct: 208 GCIPDAVSYTTVVSSMCRLGKVEEA----RELS-MRIKSFVPVYNALINGFCREHKMEEV 262

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             LF+ MA  GI P+ +T++ +++ L + G +  A+  L ++        + +V T T L
Sbjct: 263 FELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRG---CSPNVHTFTSL 319

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL------------------- 308
           M  YF  G   +AL LWN M Q+  + + VAYN LI+G C                    
Sbjct: 320 MKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGV 379

Query: 309 ----------------NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
                            GD+  A   + +M+  G LP+V+ Y  +++ LC+    + A H
Sbjct: 380 FPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALH 439

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               ++     P+ I++ T I+GLC  G    A + L  M +    P    +N ++DG  
Sbjct: 440 LIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLF 499

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
                  A  I   +    + SN+ T+N ++      G    A  +  ++L+ G  PD  
Sbjct: 500 NAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSI 559

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGIT-PDIITYTELIKGHCARGNMKEA 525
           TYN +I A C  G +  A+QL D + ++G   PD+ TYT L+ G C    + EA
Sbjct: 560 TYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEA 613



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 207/438 (47%), Gaps = 33/438 (7%)

Query: 133 KIGTALWLRRKMIQKGTVPDVL-THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           K G +L L++   QK  VP VL T N L NE   +  L++++     +++++  PN    
Sbjct: 4   KEGCSLLLKK---QKPLVPFVLNTINPLQNEQKDLNLLKESE----VLNKLKNEPNILL- 55

Query: 192 NAFITGYCRVNELDKALHLFSTMAN-NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
                          ALH F ++AN N  +   +T+  ++  L  +  + D +++L +++
Sbjct: 56  ---------------ALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDI-DGIQYLLQLM 99

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             +      D+    I++++Y + G   QAL  +  + +   +  +  YN +++      
Sbjct: 100 KLEGISCNEDLFV--IVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSEN 157

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
                   +  M + G   +V TYN LL  LCK  ++D A      +S  G  PD +SY 
Sbjct: 158 KFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYT 217

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T++  +C  G + +ARE  LSM  KS VP   ++N +I+G+ R   +   F + + M   
Sbjct: 218 TVVSSMCRLGKVEEARE--LSMRIKSFVP---VYNALINGFCREHKMEEVFELFNEMAVE 272

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+  +V T++ +I   +  G++  A ++  +M L G  P+V T+  L+      G +  A
Sbjct: 273 GIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEA 332

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L L++ M++ G  P+ + Y  LI G C+ G M EA  V  K++  G+  +   +  L   
Sbjct: 333 LDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDG 392

Query: 551 YRRMKESDKARDIHQKWL 568
           + +  +   A +I  K +
Sbjct: 393 FAKAGDLVGASEIWNKMI 410



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 126/263 (47%), Gaps = 7/263 (2%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           ET Y     +I      G +  A  +  KMI  G +P+V+ +  +V+ LC+      A H
Sbjct: 383 ETTYS---TLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALH 439

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +I  M+     PN  T+N FI G C   + + A+ + + M   G  PN  T+N ++  L 
Sbjct: 440 LIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLF 499

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
                 +A++ +GE+   ++ +  S+++T   ++  +   G    AL +   +     + 
Sbjct: 500 NAKRTREALQIVGEI---EEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKP 556

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRG-FLPDVITYNTLLNCLCKQGKLDEASHF 353
           D + YN +I  +C  G++ +A     ++ K+G   PDV TY +LL  +C    +DEA   
Sbjct: 557 DSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVH 616

Query: 354 YGVLSKTGVAPDQISYKTIIQGL 376
              +   G+ P++ ++  +++GL
Sbjct: 617 LDKMINEGICPNRATWNALVRGL 639



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 5/239 (2%)

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TY T++  L  +  +D   +   ++   G++ ++  +  +I      G   +A +    
Sbjct: 74  LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYR 133

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           + E    P   I+N ++D             I + M   G+  NV+T+N L+ A  +   
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDR 193

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           +  A  L  EM   G  PD  +Y  ++ + C LG +  A +L   M  +   P    Y  
Sbjct: 194 VDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL--SMRIKSFVP---VYNA 248

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           LI G C    M+E  E+F ++   G+  D I +  +      M   + A  +  K  LR
Sbjct: 249 LINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLR 307



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 5/138 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++   C  G    AL +  K++  GT PD +T+N ++   CK G+++ A  ++  +++ 
Sbjct: 528 TILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKK 587

Query: 183 RPS-PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK-GLLG 240
               P+  TY + + G C    +D+A+     M N GI PNR T N LV  L  K G LG
Sbjct: 588 GEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLG 647

Query: 241 DAVKFLGEVLADDDGKAT 258
             +  +  +LA  +GK T
Sbjct: 648 -PIHIVDNILA--NGKVT 662


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 220/474 (46%), Gaps = 41/474 (8%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           +L  D   +  VIR  C G ++  AL L  +M   G    ++T   L++  CK G +++A
Sbjct: 172 SLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEA 231

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             +++EM       +   Y + I G+C   ELD+   LF  +   G  P  +T+N L+  
Sbjct: 232 MGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
            CK G L +A +    ++   +     +V T T L+D     G   +AL L N M QK+ 
Sbjct: 292 FCKLGRLKEASEIFEFMM---ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDE 348

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           + ++V YN++IN  C +  ++ A      M KR   PD ITYN+LL  LC +G LDEAS 
Sbjct: 349 EPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASK 408

Query: 353 FYGVLSKTG--VAPDQISYKTIIQGLC----IH--------------------------- 379
              ++ K      PD IS+  +I GLC    +H                           
Sbjct: 409 LLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNS 468

Query: 380 ----GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
               GD+ KA E    +    +VP    +  +IDG+ + G L+ A  +   M    +  +
Sbjct: 469 TLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPS 528

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           VF +N L+ +  + G++  A+ L +EM  D  FPDV ++N++I  S   G I  A  L  
Sbjct: 529 VFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLV 588

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID-HIPFRILK 548
            M   G++PD+ TY++LI      G + EA   F K+   G   D HI   +LK
Sbjct: 589 GMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLK 642



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 232/510 (45%), Gaps = 48/510 (9%)

Query: 104 MRDTGPVRCTLETDYRRHVA--------VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           MR TG     L    +R  A        +++ LC   + G A+ L R+M Q   +PDV++
Sbjct: 120 MRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVS 179

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +N ++   C+  +LEKA  +  EM     S +  T+   I  +C+  ++D+A+ L   M 
Sbjct: 180 YNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMK 239

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           + G+  + + +  L+   C  G L        EVL   D       IT   L+  + K G
Sbjct: 240 HKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA---ITYNTLIRGFCKLG 296

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
              +A  ++  M ++ ++ ++  Y  LI+G C  G    A      ML++   P+V+TYN
Sbjct: 297 RLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYN 356

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            ++N LCK   + +A     ++ K    PD I+Y +++ GLC  GD+ +A + L  ML+ 
Sbjct: 357 IIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKD 416

Query: 396 SVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           S   +P +  +N +I G  +   L  A  I DL++    + ++ T N L+ +  + G + 
Sbjct: 417 SSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVN 476

Query: 454 DAFSLKKEM--------------LLDG---------------------IFPDVFTYNLLI 478
            A  L K++              ++DG                     + P VF YN L+
Sbjct: 477 KAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLL 536

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            + C  G +  A +L++EM R    PD+I++  +I G    G++K AE +   +   GL+
Sbjct: 537 SSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLS 596

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            D   +  L  R+ ++   D+A     K +
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMI 626



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 216/450 (48%), Gaps = 10/450 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E +  LK M+  G     LE D   + ++IR  C  G++     L  +++++G  P  
Sbjct: 228 MDEAMGLLKEMKHKG-----LEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N L+   CK+G L++A  +   M E    PN  TY   I G C V +  +AL L + 
Sbjct: 283 ITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M      PN VT+NI+++ LCK  L+ DA++ + E++     +   D IT   L+     
Sbjct: 343 MLQKDEEPNVVTYNIIINKLCKDSLVADALEIV-ELMKKR--RTRPDNITYNSLLGGLCA 399

Query: 274 NGDKFQALALWNDMFQKNIQTD--IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            GD  +A  L   M + +  TD  ++++N LI+G C    +  A   +  ++++    D+
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDI 459

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +T N LLN   K G +++A   +  +S + + P+  +Y T+I G C  G +  A+  L  
Sbjct: 460 VTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCK 519

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M    + P    +N ++    + G L  A+ + + M       +V +FN +I    + G 
Sbjct: 520 MRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGD 579

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           I  A SL   M   G+ PD+FTY+ LI     LG++  A+  +D+M+  G  PD      
Sbjct: 580 IKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDS 639

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           ++K   ++G   +  E   K+    + +D 
Sbjct: 640 VLKYCISQGETDKLTEFVKKLVDKDVVLDK 669



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 200/401 (49%), Gaps = 7/401 (1%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
            A    RKM++  T  + ++ + L+    ++     A  V+  M +   + N   YN  +
Sbjct: 90  VAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILL 149

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G CR  E  KA+ L   M  N + P+ V++N ++   C+   L  A++   E+     G
Sbjct: 150 KGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEM----QG 205

Query: 256 KATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
              S  ++T  IL+D++ K G   +A+ L  +M  K ++ D++ Y  LI GFC  G++  
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDR 265

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
             A F ++L+RG  P  ITYNTL+   CK G+L EAS  +  + + GV P+  +Y  +I 
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLID 325

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           GLC  G   +A + L  ML+K   P    +N+II+   +   +++A  I +LM       
Sbjct: 326 GLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRP 385

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF--PDVFTYNLLIGASCNLGHIHLALQ 492
           +  T+N+L+      G + +A  L   ML D  +  PDV ++N LI   C    +H AL 
Sbjct: 386 DNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALD 445

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +YD ++ +    DI+T   L+      G++ +A E++ +I 
Sbjct: 446 IYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQIS 486



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 128/255 (50%), Gaps = 3/255 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC G ++  AL +   +++K    D++T N L+N   K GD+ KA  + +++S  
Sbjct: 429 ALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNS 488

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +  PN  TY   I G+C+   L+ A  L   M  + + P+   +N L+ +LCKKG L  A
Sbjct: 489 KIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQA 548

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +   E+  DD   +  DVI+  I++D   K GD   A +L   M    +  D+  Y+ L
Sbjct: 549 WRLFEEMQRDD---SFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKL 605

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           IN F   G +  A ++F +M+  GF PD    +++L     QG+ D+ + F   L    V
Sbjct: 606 INRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDV 665

Query: 363 APDQISYKTIIQGLC 377
             D+    T++  +C
Sbjct: 666 VLDKELTCTVMDYMC 680



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 123/263 (46%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           LM +  ++ +   A + +  M + +   + V+ + L+  F        A      MLKRG
Sbjct: 78  LMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRG 137

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           F  +V  YN LL  LC+  +  +A      + +  + PD +SY T+I+G C   ++ KA 
Sbjct: 138 FAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKAL 197

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           +    M           W ++ID + + G +  A  +   M   G+ +++  + +LI   
Sbjct: 198 QLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGF 257

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G +    +L  E+L  G  P   TYN LI   C LG +  A ++++ M+ RG+ P++
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNV 317

Query: 507 ITYTELIKGHCARGNMKEAEEVF 529
            TYT LI G C  G  KEA ++ 
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLL 340



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 146/323 (45%), Gaps = 40/323 (12%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM--SE 181
           +I  LC    +  AL +   M ++ T PD +T+N L+  LC  GDL++A  ++  M    
Sbjct: 358 IINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDS 417

Query: 182 MRPSPNCATYNAFITGYCRVNEL-----------------------------------DK 206
               P+  ++NA I G C+ N L                                   +K
Sbjct: 418 SYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNK 477

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A+ L+  ++N+ I PN  T+  ++   CK G+L  A   L ++   +       V     
Sbjct: 478 AMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSE---LPPSVFDYNC 534

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+ S  K G   QA  L+ +M + +   D++++N++I+G    GDI SA +    M   G
Sbjct: 535 LLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAG 594

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PD+ TY+ L+N   K G LDEA  F+  +  +G  PD     ++++     G+  K  
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLT 654

Query: 387 EFLLSMLEKSVVPEPHIWNVIID 409
           EF+  +++K VV +  +   ++D
Sbjct: 655 EFVKKLVDKDVVLDKELTCTVMD 677



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 115/223 (51%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           AF+++ +ML+     + ++ + LL C  +  K   A     ++ K G A +  +Y  +++
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLK 150

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           GLC + +  KA   L  M + S++P+   +N +I G+    +L  A  + + M   G S 
Sbjct: 151 GLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSW 210

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           ++ T+  LI A  + G + +A  L KEM   G+  D+  Y  LI   C+ G +     L+
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALF 270

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           DE+L RG +P  ITY  LI+G C  G +KEA E+F  +   G+
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGV 313



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 73/151 (48%)

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +  LML  G + NV+ +N L+    R      A SL +EM  + + PDV +YN +I 
Sbjct: 126 AHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIR 185

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C    +  ALQL +EM   G +  ++T+  LI   C  G M EA  +  +++  GL  
Sbjct: 186 GFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEA 245

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           D I +  L + +    E D+ + +  + L R
Sbjct: 246 DLIVYTSLIRGFCDCGELDRGKALFDEVLER 276


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 200/423 (47%), Gaps = 14/423 (3%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           +R L   G++  AL L   +   G  P V+  N L+ +LC  G +  A+ V+  +    P
Sbjct: 68  LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALG---P 124

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           S    TYN  + GYCR   +D A  +  ++      P+  T+N L+ ALC +G + DA+ 
Sbjct: 125 SATIITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCVLDALA 181

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              ++L       +  V+T +IL+D+  K     QA+ L ++M  K  + DIV YNVLIN
Sbjct: 182 VFDDMLHRG---CSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
             C  GD+  A      +   G  PD +TY  +L  LC   + +EA      +     AP
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAP 298

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D++++  +I  LC  G + +A + L  M E    P+   ++ I+DG  +   +  A  + 
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358

Query: 425 DLMLSFGVSSNVF----TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI-G 479
             +L+  VS N      TFN +I +  + G    A  +  EM   G  PD+ TYN ++ G
Sbjct: 359 KELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDG 418

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C       AL L + M+  G+ PD  TY  L  G      M+ A  +F ++Q +GL+ 
Sbjct: 419 FLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSP 478

Query: 540 DHI 542
           D +
Sbjct: 479 DKM 481



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 199/415 (47%), Gaps = 11/415 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C  G I  A   RR +      PD  T+N L+  LC  G +  A  V  +M    
Sbjct: 134 MVNGYCRAGNIDAA---RRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRG 190

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP+  TY+  +   C+ +   +A+ L   M + G  P+ VT+N+L++A+C +G +G+A+
Sbjct: 191 CSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEAL 250

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L  + +        D +T T ++ S   +    +A  L   MF  +   D V +N +I
Sbjct: 251 KVLNSLPSYG---CKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVI 307

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
              C  G +  A     QM + G  PD+ITY+++++ LCK+ ++DEA      L    V+
Sbjct: 308 TSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVS 367

Query: 364 ----PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY-GRCGDLS 418
               PDQ+++ TII  LC  G   +A + +  M E   +P+   +N I+DG+  +     
Sbjct: 368 KNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTE 427

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  + +LM+S G+  +  T+ +L    +R   +  A  + + +   G+ PD   YN ++
Sbjct: 428 EALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAIL 487

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
              C      LA+  +  M+  G  PD  TY  L++G    G ++EA+E+   + 
Sbjct: 488 LGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNLS 542



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 187/434 (43%), Gaps = 46/434 (10%)

Query: 167 GDLEKADHVIREMSEMRPSPNCAT---YNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
            D    DH   + +   P P   +    N  + G  +  ELD AL L  +++ +G  P  
Sbjct: 37  ADYHNRDHGTAKWTRTPPKPPARSGGGANRRLRGLVQRGELDGALRLVHSISGSGKDPAV 96

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG-------- 275
           +  NIL+  LC  G + DA + + E L       ++ +IT   +++ Y + G        
Sbjct: 97  IPCNILIKKLCADGRVADAERVV-EALG-----PSATIITYNTMVNGYCRAGNIDAARRM 150

Query: 276 --------DKF----------------QALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   D F                 ALA+++DM  +     +V Y++L++  C    
Sbjct: 151 IDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESG 210

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A     +M  +G  PD++TYN L+N +C QG + EA      L   G  PD ++Y  
Sbjct: 211 YKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTP 270

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +++ LC      +A + L  M      P+   +N +I    + G +  A  +   M   G
Sbjct: 271 VLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHG 330

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI----FPDVFTYNLLIGASCNLGHI 487
            + ++ T+++++    +   + +A  L KE+L + +     PD  T+N +I + C  G  
Sbjct: 331 CTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLF 390

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGH-CARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
             A+++ DEM   G  PDI TY  ++ G  C     +EA ++   + + GL  D   ++ 
Sbjct: 391 DRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKS 450

Query: 547 LKKRYRRMKESDKA 560
           L     R  E ++A
Sbjct: 451 LAFGLSREDEMERA 464



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 159/328 (48%), Gaps = 7/328 (2%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           K+ +  L  MR  G      E D   +  +I  +C  G +G AL +   +   G  PD +
Sbjct: 212 KQAVVLLDEMRSKG-----CEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAV 266

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  ++  LC     E+AD ++ +M     +P+  T+NA IT  C+   + +A  + + M
Sbjct: 267 TYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQM 326

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK-ATSDVITSTILMDSYFK 273
           + +G  P+ +T++ ++  LCK+  + +A+K L E+LA+   K    D +T   ++ S  +
Sbjct: 327 SEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQ 386

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGF-CLNGDISSAFAYFCQMLKRGFLPDVI 332
            G   +A+ + ++M +     DI  YN +++GF C +     A      M+  G  PD  
Sbjct: 387 KGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTT 446

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TY +L   L ++ +++ A   +  +   G++PD++ Y  I+ GLC       A +F   M
Sbjct: 447 TYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYM 506

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           +    +P+   + ++++G    G L  A
Sbjct: 507 VSNGCMPDESTYIILVEGIAYEGFLEEA 534



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 8/280 (2%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   +  V++ LC   +   A  L  KM      PD +T N ++  LC+ G + +A  
Sbjct: 262 KPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATK 321

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKAL----HLFSTMANNGIRPNRVTHNILV 230
           V+ +MSE   +P+  TY++ + G C+   +D+A+     L + M +    P++VT N ++
Sbjct: 322 VLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTII 381

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF-KNGDKFQALALWNDMFQ 289
            +LC+KGL   A+K + E+    +     D+ T   ++D +  K+    +AL L N M  
Sbjct: 382 TSLCQKGLFDRAIKVVDEM---SEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVS 438

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             +  D   Y  L  G     ++  A   F ++   G  PD + YN +L  LCK+ + D 
Sbjct: 439 NGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDL 498

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           A  F+  +   G  PD+ +Y  +++G+   G + +A+E L
Sbjct: 499 AIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELL 538


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 220/461 (47%), Gaps = 4/461 (0%)

Query: 81  GNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWL 140
           GN   V NA+        + L+ +RD  P     + D   + AV++ LC+  + G    L
Sbjct: 189 GNCNLVLNAVCDQGGSVDEALRLLRDL-PTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDL 247

Query: 141 RRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCR 200
             +M++ G  P+V+T N L+  LC+ G  E+   V+ +M +   +P+   Y   + G C+
Sbjct: 248 MEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCK 307

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
              L+ A  +   M + G++PN V +N ++  LC       A + L E+  +D      D
Sbjct: 308 EGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDND---CPLD 364

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
            +T  IL+D + +NG  ++ + L   M +     D++ Y  +INGFC  G I  A     
Sbjct: 365 DVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLK 424

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            M   G  P+ I+Y  +L  LC   +  +A      + + G +P+ +++ T+I  LC  G
Sbjct: 425 SMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKG 484

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            + +A E L  ML     P+   ++ +IDG G+ G    A  + ++M++ G+S N   ++
Sbjct: 485 LVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 544

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           ++  A ++ G I     +   +    I  D   YN +I + C  G    A++    M+  
Sbjct: 545 SIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSS 604

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           G  P+  TYT LI+G  + G +KEA+E+  ++ + G    H
Sbjct: 605 GCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKH 645



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/480 (23%), Positives = 202/480 (42%), Gaps = 43/480 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVP----------------------------- 151
           +  V+R LC  G+I  AL +  +M ++G  P                             
Sbjct: 118 YFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQ 177

Query: 152 ---------DVLTHNYLVNELC-KIGDLEKADHVIREM-SEMRPSPNCATYNAFITGYCR 200
                    DV   N ++N +C + G +++A  ++R++ +     P+  +YNA + G C 
Sbjct: 178 DLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCM 237

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
                +   L   M   G  PN VT N L+  LC+ GL     + L +++   D   T D
Sbjct: 238 AKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMV---DHGCTPD 294

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           +     ++D   K G    A  + + M    ++ ++V YN ++ G C       A     
Sbjct: 295 IRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLA 354

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +M       D +T+N L++  C+ G +         + + G  PD I+Y T+I G C  G
Sbjct: 355 EMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEG 414

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            I +A   L SM      P    + +++ G        +A  +   M+  G S N  TFN
Sbjct: 415 LIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFN 474

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            +I    + G +  A  L K+MLL+G  PD+ +Y+ +I      G    AL+L + M+ +
Sbjct: 475 TVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK 534

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G++P+ I Y+ +       G +    ++F  IQ + +  D + +  +     +   +D+A
Sbjct: 535 GMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRA 594



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 173/382 (45%), Gaps = 9/382 (2%)

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YNA ++GYCR  +L  A  L +++    + PN  T+  +V ALC +G + DA+  L E+ 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEM- 141

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKF--QALALWNDMFQKNIQTDIVAYNVLINGFCL 308
               G A    +   IL  +  + G      A+ +  D+  +    D+   N+++N  C 
Sbjct: 142 -RRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCD 200

Query: 309 NGDISSAFAYFCQMLKRGFL--PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
            G          + L   F   PDV++YN +L  LC   +          + + G  P+ 
Sbjct: 201 QGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNV 260

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           +++ T+I  LC +G   +  + L  M++    P+  ++  ++DG  + G L  A  I D 
Sbjct: 261 VTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDR 320

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M S+G+  NV  +N ++           A  L  EM  +    D  T+N+L+   C  G 
Sbjct: 321 MPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGL 380

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           ++  ++L ++ML  G  PD+ITYT +I G C  G + EA  +   +   G   + I + I
Sbjct: 381 VYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTI 440

Query: 547 LKKRYRRMKESDKARDIHQKWL 568
           + K     +    A D+  + +
Sbjct: 441 VLKGLCSAERWVDAEDLMSQMI 462



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/449 (22%), Positives = 200/449 (44%), Gaps = 17/449 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++   C  G++ +A   RR        P+  T+  +V  LC  G +  A  V+ EM   
Sbjct: 88  AMVSGYCRAGQLASA---RRLAASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRRR 144

Query: 183 RPSPNCATYNAFITGYCR---VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG-L 238
             +P    Y+  +   C          A+ +   +   G   +    N++++A+C +G  
Sbjct: 145 GCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGS 204

Query: 239 LGDAVKFLGEVLA----DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           + +A++ L ++      D D  + + V+    +   + +  D      L  +M +     
Sbjct: 205 VDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQD------LMEEMVRVGCPP 258

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++V +N LI   C NG          QM+  G  PD+  Y T+L+ +CK+G L+ A    
Sbjct: 259 NVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEIL 318

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G+ P+ + Y T+++GLC      +A E L  M +     +   +N+++D + + 
Sbjct: 319 DRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQN 378

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G +     + + ML  G   +V T+  +I    + G I +A  L K M   G  P+  +Y
Sbjct: 379 GLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISY 438

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
            +++   C+      A  L  +M+ +G +P+ +T+  +I   C +G +++A E+  ++  
Sbjct: 439 TIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLL 498

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDI 563
            G + D I +  +     +  ++D+A ++
Sbjct: 499 NGCSPDLISYSTVIDGLGKAGKTDEALEL 527


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 225/451 (49%), Gaps = 5/451 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  +I  +   G +  AL +  +M  +G V DV  +N L++   K GD +K  
Sbjct: 182 LKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGK 241

Query: 174 HVI-REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
            +  R + +    PN  TYN  I G C+    D++L ++  M  N    +  T++ L+H 
Sbjct: 242 EIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHG 301

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LC+ G +  AV+   E++   +     D +T   +++ + + G   ++  LW  M ++N 
Sbjct: 302 LCEAGNIDGAVRVYKEIV---ESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENC 358

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           QT +V+YN+LI G   NG +  A + +  + K+G  P+  TY  L++ LCK G+L++A  
Sbjct: 359 QT-VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALK 417

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            +          D  +Y +++ GLC  G + +A   +  M ++    +PH+ N +I+G+ 
Sbjct: 418 IFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFV 477

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           R   L +A +    M   G S  + ++N LI    +     +A+S  KEML     PD+ 
Sbjct: 478 RASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMI 537

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           T +LL+   C    I +AL L+ + L +G  PDI  Y  L+ G C+   +++A ++++ +
Sbjct: 538 TCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHM 597

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           +      + +    L +   ++++ +KA +I
Sbjct: 598 KRSTCVPNLVTRNTLMEGLYKVRDYEKASEI 628



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 193/404 (47%), Gaps = 10/404 (2%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   + ++I  LC  G I  A+ + +++++   V D +THN ++N  C+ G ++++  
Sbjct: 289 EKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFE 348

Query: 175 VIREMSEMRPSPNCAT---YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           +   M +     NC T   YN  I G     ++++A+ ++  +   G RP   T+ +L+H
Sbjct: 349 LWMVMGK----ENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIH 404

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            LCK G L  A+K   E    +DG    D    + ++D   K G   +A+++ N M ++ 
Sbjct: 405 GLCKNGRLNKALKIFKEA---EDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRG 461

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
            + D    N LINGF     +  A  +F +M  +G  P +++YNTL+  LCK  +  EA 
Sbjct: 462 YKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAY 521

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
            F   + +    PD I+   ++ GLC    I  A       L+K   P+  ++N+++ G 
Sbjct: 522 SFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGL 581

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
                L +A  +   M       N+ T N L+    +      A  +   +L DG+ PD+
Sbjct: 582 CSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDI 641

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            +YN+ I   C+   I  A++  ++ L RGI P  +T+  L++ 
Sbjct: 642 ISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRA 685



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 203/416 (48%), Gaps = 7/416 (1%)

Query: 135 GTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           G  +W R  +++  +V P+V+T+N ++N LCK G  +++  +   M++     +  TY++
Sbjct: 240 GKEIWER--LVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSS 297

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            I G C    +D A+ ++  +  + +  + VTHN +++  C+ G + ++ + L  V+  +
Sbjct: 298 LIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFE-LWMVMGKE 356

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
           + +    V++  IL+   F+NG   +A+++W  + +K  + +   Y VLI+G C NG ++
Sbjct: 357 NCQT---VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLN 413

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A   F +        D   Y+++++ LCK+G++DEA      + K G   D      +I
Sbjct: 414 KALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLI 473

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            G      +  A  F   M  K   P    +N +I G  +    S A+S    ML     
Sbjct: 474 NGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWK 533

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            ++ T + L+    +   I  A +L ++ L  G  PD+  YN+L+   C++  +  ALQL
Sbjct: 534 PDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQL 593

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           Y  M R    P+++T   L++G     + ++A E++  I   GL  D I + I  K
Sbjct: 594 YSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIK 649



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 194/406 (47%), Gaps = 11/406 (2%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P V ++N L+N   ++ + ++A+   R    M  SPN  TYN  I   C+  +++KA
Sbjct: 111 GCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKA 170

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + L   M +  ++P+  ++  L++ + K G L  A+K   E+         +DV    +L
Sbjct: 171 ISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRG---VVADVTCYNML 227

Query: 268 MDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +D +FK+GD  +   +W  + +  ++  ++V YN++ING C  G    +   + +M K  
Sbjct: 228 IDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNE 287

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
              D+ TY++L++ LC+ G +D A   Y  + ++ +  D +++  ++ G C  G I ++ 
Sbjct: 288 REKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESF 347

Query: 387 EFLLSMLE---KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           E  + M +   ++VV     +N++I G    G +  A SI +L+   G      T+  LI
Sbjct: 348 ELWMVMGKENCQTVVS----YNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLI 403

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G +  A  + KE        D + Y+ ++   C  G +  A+ + ++M +RG  
Sbjct: 404 HGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYK 463

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
            D      LI G      +++A   F +++  G +   + +  L K
Sbjct: 464 LDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIK 509



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 4/248 (1%)

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  P V +YNTLLN   +  + D A  F        V+P+  +Y  +I+  C    I KA
Sbjct: 111 GCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKA 170

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
              L  M  +++ P+   +  +I+G  + GDL  A  + D M   GV ++V  +N LI  
Sbjct: 171 ISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDG 230

Query: 446 ETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
             + G       + + ++ D  ++P+V TYN++I   C  G    +L++++ M +     
Sbjct: 231 FFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREK 290

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
           D+ TY+ LI G C  GN+  A  V+ +I    L +D +    +   + R   + K ++  
Sbjct: 291 DMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCR---AGKIKESF 347

Query: 565 QKWLLRNK 572
           + W++  K
Sbjct: 348 ELWMVMGK 355


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 234/456 (51%), Gaps = 25/456 (5%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T + L  ++   G  P++++ + L+N  C +G +  A  +  ++ +M   PN  T    +
Sbjct: 89  TVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLV 148

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G+C  +++ +ALH    +   G   N+V++  L++ LCK G    A++ L ++    +G
Sbjct: 149 KGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQI----EG 204

Query: 256 K-ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           K  ++DV+  + ++D   K+     A  L+++M  K I   +V  N LI G+C+ G    
Sbjct: 205 KLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKE 264

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           AF    +M+ +   PDV T+N L++ LCK+GK+ EA     V+ K GV PD ++Y +++ 
Sbjct: 265 AFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMD 324

Query: 375 GLCIHGDIVKAREFL---------LSMLEKS-----------VVPEPHIWNVIIDGYGRC 414
           G C+  ++ KA+            + M++K+           + P+   +N +IDG  + 
Sbjct: 325 GYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKS 384

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G +S A+ + D M   G  +++ T+N+LI A  +   +  A +L K++   GI  D++TY
Sbjct: 385 GRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTY 444

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N+LI   C  G +  A  ++ ++L +G    + TYT +I G C  G + EAE + +K++ 
Sbjct: 445 NILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMED 504

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            G   D +    + +      ++++A  + ++ + R
Sbjct: 505 NGCVPDAVTCETIIRALFENDKNERAEKLLREMIAR 540



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 184/380 (48%), Gaps = 18/380 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC  G+   AL + R++  K    DV+ ++ +++ LCK   +  A  +  EM   
Sbjct: 181 TLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITK 240

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R SP   T N+ I GYC V +  +A  L   M    I P+  T NILV ALCK+G + +A
Sbjct: 241 RISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEA 300

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              +  ++ +       DV+T + LMD Y           L N++ +         Y+++
Sbjct: 301 KSGIAVMMKEG---VMPDVVTYSSLMDGY----------CLVNEVNKAK-----HVYSIV 342

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           INGFC    +  A + F +M  R   PD +TYN+L++ LCK G++  A      +  +G 
Sbjct: 343 INGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQ 402

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D I+Y ++I  LC +  + KA   +  + ++ +  + + +N++IDG  + G L +A  
Sbjct: 403 PADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQV 462

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I   +L  G +  V+T+  +I      G + +A +L  +M  +G  PD  T   +I A  
Sbjct: 463 IFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALF 522

Query: 483 NLGHIHLALQLYDEMLRRGI 502
                  A +L  EM+ RG+
Sbjct: 523 ENDKNERAEKLLREMIARGL 542



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 151/296 (51%), Gaps = 23/296 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C+ G+   A  L R+M+ K   PDV T N LV+ LCK G +++A   I  M + 
Sbjct: 251 SLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKE 310

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANN--------------------GIRPN 222
              P+  TY++ + GYC VNE++KA H++S + N                      I P+
Sbjct: 311 GVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPD 370

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
            VT+N L+  LCK G +  A + + E+    D    +D+IT   L+D+  KN    +A+A
Sbjct: 371 TVTYNSLIDGLCKSGRISYAWELVDEM---RDSGQPADIITYNSLIDALCKNHHVDKAIA 427

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           L   +  + IQ D+  YN+LI+G C  G +  A   F  +L +G+   V TY  ++N LC
Sbjct: 428 LVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLC 487

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
            +G L+EA      +   G  PD ++ +TII+ L  +    +A + L  M+ + ++
Sbjct: 488 LEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGLL 543



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 132/282 (46%), Gaps = 35/282 (12%)

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           ++ M   N    ++ +  +++         +  + F Q+   G  P++++ + L+NC C 
Sbjct: 59  FHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCH 118

Query: 344 QG-----------------------------------KLDEASHFYGVLSKTGVAPDQIS 368
            G                                   K+ EA HF+  +   G   +Q+S
Sbjct: 119 LGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVS 178

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y T+I GLC  G+   A + L  +  K V  +  +++ IIDG  +   +++A+ +   M+
Sbjct: 179 YGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMI 238

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           +  +S  V T N+LI      G   +AF L +EM+L  I PDV+T+N+L+ A C  G I 
Sbjct: 239 TKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIK 298

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
            A      M++ G+ PD++TY+ L+ G+C    + +A+ V++
Sbjct: 299 EAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYS 340



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 12/215 (5%)

Query: 363 APDQISYKTIIQGLCIHGDIVKAREF-----LLSMLE-KSVVPEPHIWNVIIDGYGRCGD 416
           AP  I +  I+  L      VK + +     L   LE   + P     +++I+ Y   G 
Sbjct: 68  APSVIEFGKILSSL------VKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQ 121

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  AFSI   +L  G   N  T   L+        + +A      +L  G   +  +Y  
Sbjct: 122 MRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGT 181

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C +G    ALQ+  ++  + ++ D++ Y+ +I G C    + +A E+++++ T  
Sbjct: 182 LINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKR 241

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           ++   +    L   Y  + +  +A  + ++ +L+N
Sbjct: 242 ISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKN 276



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 51/115 (44%)

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           D  S    MLL    P V  +  ++ +   L H    + L+ ++   GI P+I++ + LI
Sbjct: 54  DLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILI 113

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             +C  G M+ A  +FAKI  +G   + I    L K +    +  +A   H   L
Sbjct: 114 NCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVL 168


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 214/466 (45%), Gaps = 19/466 (4%)

Query: 71  WFSNKDSDNEGNPQAVFNAL--------DLILKENLDRLKTMRDTGPVRCTLETDYRRHV 122
           +F     D  G     +N+L        DL   E+L    T +   P   T         
Sbjct: 422 YFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTF-------T 474

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C   ++  A  L  KMI  G  P+V T   L++ LC    + +A  +  E+ E 
Sbjct: 475 SLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVER 534

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +  P   TYN  I GYCR  ++DKA  L   M   G+ P+  T+  L+  LC  G +  A
Sbjct: 535 KIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKA 594

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
             F+ ++   +      + +  + L+  Y + G   +AL+   +M Q+ I  D+V + VL
Sbjct: 595 KDFIDDLHKQN---VKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVL 651

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G     D  + F     M  +G  PD + Y ++++   K+G   +A   + ++     
Sbjct: 652 IDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEEC 711

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ ++Y  ++ GLC  G++ +A      M   +V P    +   +D   + G++  A  
Sbjct: 712 FPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIG 771

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   ML  G+ +N  T N +I    + G   +A  +  EM  +GIFPD  TY+ LI   C
Sbjct: 772 LHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYC 830

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
             G++  +++L+D ML RG+ PD++ Y  LI G C  G + +A E+
Sbjct: 831 RSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFEL 876



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 219/481 (45%), Gaps = 37/481 (7%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G++  A+    +MIQ G    V  +N L+N  CK GDL  A+ +  EM+   
Sbjct: 406 LIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKG 465

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P   T+ + I+GYC+  ++ KA  L++ M +NGI PN  T   L+  LC    + +A 
Sbjct: 466 VEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEAS 525

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E++   + K     +T  +L++ Y ++G   +A  L  DM QK +  D   Y  LI
Sbjct: 526 ELFDELV---ERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLI 582

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G +S A  +   + K+    + + Y+ LL+  C++G+L EA      + + G+ 
Sbjct: 583 SGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGIN 642

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D + +  +I G     D     + L  M ++ + P+  I+  +ID Y + G    AF  
Sbjct: 643 MDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFEC 702

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM--------------------- 462
            DLM++     NV T+ AL+    + G +  A  L K M                     
Sbjct: 703 WDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTK 762

Query: 463 -------------LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
                        +L G+  +  T+N++I   C LG  H A ++  EM   GI PD +TY
Sbjct: 763 EGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTY 822

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
           + LI  +C  GN+  + +++  +   GL  D + + +L        E DKA ++    L 
Sbjct: 823 STLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLR 882

Query: 570 R 570
           R
Sbjct: 883 R 883



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 214/438 (48%), Gaps = 3/438 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC G ++  A+ ++R +  KG   DV+T+  LV   C++   E    ++ EM E+
Sbjct: 265 VLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVEL 324

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SP  A  +  + G  +  ++D A  L   +   G  PN   +N L+++LCK G L D 
Sbjct: 325 GFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDL-DK 383

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L   ++  + +     IT +IL+DS+ ++G    A++ ++ M Q  I   + AYN L
Sbjct: 384 AELLYSNMSLMNLRPNG--ITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSL 441

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING C  GD+S+A + F +M  +G  P   T+ +L++  CK  ++ +A   Y  +   G+
Sbjct: 442 INGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGI 501

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+  ++  +I GLC    + +A E    ++E+ + P    +NV+I+GY R G +  AF 
Sbjct: 502 TPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFE 561

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M   G+  + +T+  LI      G +  A     ++    +  +   Y+ L+   C
Sbjct: 562 LLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYC 621

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +  AL    EM++RGI  D++ +  LI G   + + K   ++   +   GL  D++
Sbjct: 622 QEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNV 681

Query: 543 PFRILKKRYRRMKESDKA 560
            +  +   Y +     KA
Sbjct: 682 IYTSMIDTYSKEGSFKKA 699



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 209/440 (47%), Gaps = 5/440 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++++  L  +I  A+ + + M     +P+V T + L+N L K+        +  E     
Sbjct: 161 LVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAG 220

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T +A +   C + +  +A      M  NG   + VT+N+L+H LCK    GD V
Sbjct: 221 VRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCK----GDRV 276

Query: 244 KFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
               EV     GK   +DV+T   L+  + +       + L ++M +        A + L
Sbjct: 277 SEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGL 336

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G    G I  A+    ++ + GF+P++  YN L+N LCK G LD+A   Y  +S   +
Sbjct: 337 VDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNL 396

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ I+Y  +I   C  G +  A  +   M++  +    + +N +I+G  + GDLS A S
Sbjct: 397 RPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAES 456

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M + GV     TF +LI    +   +  AF L  +M+ +GI P+V+T+  LI   C
Sbjct: 457 LFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLC 516

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           +   +  A +L+DE++ R I P  +TY  LI+G+C  G + +A E+   +   GL  D  
Sbjct: 517 STNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTY 576

Query: 543 PFRILKKRYRRMKESDKARD 562
            +R L           KA+D
Sbjct: 577 TYRPLISGLCSTGRVSKAKD 596



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 214/452 (47%), Gaps = 11/452 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AV+R +C       A    R M   G    ++T+N L++ LCK   + +A  V R +   
Sbjct: 230 AVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGK 289

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             + +  TY   + G+CR+ + +  + L   M   G  P     + LV  L K+G + DA
Sbjct: 290 GLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDA 349

Query: 243 VKFLGEVLADDDGKA--TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            + + +V     G+     ++     L++S  K GD  +A  L+++M   N++ + + Y+
Sbjct: 350 YELVVKV-----GRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYS 404

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI+ FC +G +  A +YF +M++ G    V  YN+L+N  CK G L  A   +  ++  
Sbjct: 405 ILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNK 464

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GV P   ++ ++I G C    + KA +    M++  + P  + +  +I G      ++ A
Sbjct: 465 GVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEA 524

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + D ++   +     T+N LI    R G I  AF L ++M   G+ PD +TY  LI  
Sbjct: 525 SELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISG 584

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C+ G +  A    D++ ++ +  + + Y+ L+ G+C  G + EA     ++   G+ +D
Sbjct: 585 LCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMD 644

Query: 541 HIPFRIL----KKRYRRMKESDKARDIHQKWL 568
            +   +L     K+  R    D  +D+H + L
Sbjct: 645 LVCHAVLIDGALKQPDRKTFFDLLKDMHDQGL 676



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 196/419 (46%), Gaps = 3/419 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K  T   L  + +  G  PD  T + +V  +C++ D  +A   IR M       +  TYN
Sbjct: 205 KFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYN 264

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I G C+ + + +A+ +  ++   G+  + VT+  LV   C+       ++ + E++  
Sbjct: 265 VLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMV-- 322

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
           + G + ++   S  L+D   K G    A  L   + +     ++  YN LIN  C  GD+
Sbjct: 323 ELGFSPTEAAVSG-LVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDL 381

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A   +  M      P+ ITY+ L++  C+ G+LD A  ++  + + G+     +Y ++
Sbjct: 382 DKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSL 441

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I G C  GD+  A    + M  K V P    +  +I GY +   +  AF + + M+  G+
Sbjct: 442 INGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGI 501

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           + NV+TF ALI        + +A  L  E++   I P   TYN+LI   C  G I  A +
Sbjct: 502 TPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFE 561

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           L ++M ++G+ PD  TY  LI G C+ G + +A++    +    + ++ + +  L   Y
Sbjct: 562 LLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGY 620



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 4/280 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++   C  G++  AL    +MIQ+G   D++ H  L++   K  D +    ++++M 
Sbjct: 613 YSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMH 672

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    P+   Y + I  Y +     KA   +  M      PN VT+  L++ LCK G + 
Sbjct: 673 DQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMD 732

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A      + A        + IT    +D+  K G+  +A+ L + M  K +  + V +N
Sbjct: 733 RAGLLFKRMQA---ANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHN 788

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           ++I GFC  G    A     +M + G  PD +TY+TL+   C+ G +  +   +  +   
Sbjct: 789 IIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNR 848

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           G+ PD ++Y  +I G C++G++ KA E    ML + ++P+
Sbjct: 849 GLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 174/421 (41%), Gaps = 53/421 (12%)

Query: 201 VNELDKA---LHLFSTMA-NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           +N LD A   L  F+ +  +  +  +  ++ I+VHAL    L   A   L  +L  +   
Sbjct: 77  MNTLDDAKLALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHP 136

Query: 257 AT--------------SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                           S  +   +L+ +Y  +   F A+ +   MF  N+  ++   + L
Sbjct: 137 KCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSAL 196

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPD-------------------------------- 330
           +NG        + +  F + +  G  PD                                
Sbjct: 197 LNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGF 256

Query: 331 ---VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
              ++TYN L++ LCK  ++ EA      L   G+A D ++Y T++ G C         +
Sbjct: 257 DLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQ 316

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            +  M+E    P     + ++DG  + G + +A+ +   +  FG   N+F +NALI +  
Sbjct: 317 LMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLC 376

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +GG +  A  L   M L  + P+  TY++LI + C  G + +A+  +D M++ GI   + 
Sbjct: 377 KGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVY 436

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
            Y  LI G C  G++  AE +F ++   G+      F  L   Y +  +  KA  ++ K 
Sbjct: 437 AYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKM 496

Query: 568 L 568
           +
Sbjct: 497 I 497



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 113/286 (39%), Gaps = 35/286 (12%)

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
           D +++   +  + +N+L+  + L+  I  A      M     LP+V T + LLN L K  
Sbjct: 145 DSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVR 204

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           K       +      GV PD  +   +++ +C   D ++A+E                  
Sbjct: 205 KFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKE------------------ 246

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
                            IR  M + G   ++ T+N LI    +G  + +A  +K+ +   
Sbjct: 247 ----------------KIR-WMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGK 289

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G+  DV TY  L+   C L      +QL DEM+  G +P     + L+ G   +G + +A
Sbjct: 290 GLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDA 349

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            E+  K+   G   +   +  L     +  + DKA  ++    L N
Sbjct: 350 YELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMN 395


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 209/400 (52%), Gaps = 3/400 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D      ++R LC+ GKIG AL +  KM+ +G  P+V+T+  L+N LCK   L +A +
Sbjct: 123 QPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALN 182

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  EM     SP+  TYN+ I   C + E      L + M  + I PN V+ NI+V ALC
Sbjct: 183 LFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALC 242

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G + +A   +  ++    G    DV+T   LMD +    +  +A+ +++ M +     
Sbjct: 243 KEGKVTEAHDVVDMMI---QGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVC 299

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++V+YN LING+C    I  A   F +M ++  +P+ +TY+TL++ LC  G+L +A   +
Sbjct: 300 NVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALF 359

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G  P+ ++Y  ++  LC +  + +A   L ++   ++ P+  ++N+ IDG  R 
Sbjct: 360 NEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRA 419

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           GDL  A  +   +   G+  +V+T N +I    + G + +A  L +EM  +G   +  TY
Sbjct: 420 GDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTY 479

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           N +            A+QL +EML RG + D+ T   L+K
Sbjct: 480 NTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVK 519



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 217/435 (49%), Gaps = 3/435 (0%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T L L +KM   G  PDV T   ++N  C +  ++ A  V+ ++ ++   P+ AT+   +
Sbjct: 74  TVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLV 133

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C V ++ +AL +F  M   G +PN VT+  L++ LCK   L +A+    E++A    
Sbjct: 134 RGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKG-- 191

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
             + D+ T   L+ +     +      L N+M +  I  ++V+ N++++  C  G ++ A
Sbjct: 192 -ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEA 250

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                 M++ G  PDV+TY  L++  C + ++DEA   + ++ + G   + +SY T+I G
Sbjct: 251 HDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLING 310

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C    I KA      M  + ++P    ++ +I G    G L +A ++ + M++ G   N
Sbjct: 311 YCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPN 370

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           + T++ L+    +   + +A +L K +    + PDV  YN+ I   C  G +  A  L+ 
Sbjct: 371 LVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFS 430

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
            +  RG+ PD+ T+  +I+G C RG + EA ++F ++   G   +   +  + +   +  
Sbjct: 431 NLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNN 490

Query: 556 ESDKARDIHQKWLLR 570
           ++ +A  + ++ L R
Sbjct: 491 KTSRAIQLLEEMLAR 505



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 205/439 (46%), Gaps = 7/439 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL    +M+     P +     L+  + K+        + ++M      P+  T    I 
Sbjct: 40  ALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVIN 99

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            +C +N +D AL + + +   G +P+  T   LV  LC  G +G+A+    +++ +    
Sbjct: 100 SFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG--- 156

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              +V+T   LM+   K+    +AL L+++M  K I  DI  YN LI+  C   +     
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M+K   +P+V++ N +++ LCK+GK+ EA     ++ + GV PD ++Y  ++ G 
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C+  ++ +A +    M+    V     +N +I+GY +   +  A  + + M    +  N 
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T++ LI      G + DA +L  EM+  G  P++ TY++L+   C    +  A+ L   
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKA 396

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID----HIPFRILKKRYR 552
           +    + PD+  Y   I G C  G+++ A ++F+ +   GL  D    +I  R L KR  
Sbjct: 397 IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL 456

Query: 553 RMKESDKARDIHQKWLLRN 571
             + S   R++ +   LRN
Sbjct: 457 LDEASKLFREMDENGCLRN 475



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 184/395 (46%), Gaps = 3/395 (0%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           L+ A      M  M P P    +   +T   ++      L L   M + GI P+  T  I
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++++ C    +  A+  L ++L         D  T T L+      G   +AL +++ M 
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGH---QPDTATFTTLVRGLCVVGKIGEALDVFDKMV 153

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            +  Q ++V Y  L+NG C +  ++ A   F +M+ +G  PD+ TYN+L++ LC   +  
Sbjct: 154 GEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWK 213

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
             +     + K+ + P+ +S   ++  LC  G + +A + +  M++  V P+   +  ++
Sbjct: 214 HVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALM 273

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           DG+    ++  A  + D+M+  G   NV ++N LI    +   I  A  L +EM    + 
Sbjct: 274 DGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELI 333

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P+  TY+ LI   C++G +  A+ L++EM+  G  P+++TY+ L+   C    + EA  +
Sbjct: 334 PNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMAL 393

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
              I+   L  D   + I      R  + + ARD+
Sbjct: 394 LKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDL 428



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 133/282 (47%), Gaps = 38/282 (13%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   + A++   CL  ++  A+ +   M++ G V +V+++N L+N  CKI  ++KA 
Sbjct: 262 VEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAM 321

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           ++  EM      PN  TY+  I G C V  L  A+ LF+ M   G  PN VT++IL+  L
Sbjct: 322 YLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYL 381

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   L +A                                      +AL   +   N+ 
Sbjct: 382 CKNHRLAEA--------------------------------------MALLKAIEGSNLD 403

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+  YN+ I+G C  GD+ +A   F  +  RG  PDV T+N ++  LCK+G LDEAS  
Sbjct: 404 PDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKL 463

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           +  + + G   +  +Y TI QGL  +    +A + L  ML +
Sbjct: 464 FREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLAR 505



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 62/137 (45%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D + +   I  +C  G +  A  L   +  +G  PDV THN ++  LCK G L++A 
Sbjct: 402 LDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEAS 461

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + REM E     N  TYN    G  + N+  +A+ L   M   G   +  T  +LV  L
Sbjct: 462 KLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKML 521

Query: 234 CKKGLLGDAVKFLGEVL 250
              GL     + L E +
Sbjct: 522 SDDGLDQSVKQILCEFM 538


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 202/409 (49%), Gaps = 3/409 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK   A+ L   M+ +G  PD  T+  ++N LCKIG+   A  + ++M E     N  TY
Sbjct: 59  GKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTY 118

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  I   C+   +++AL +FS M    I P   T+  L+  LC      +A   L E+ +
Sbjct: 119 STLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS 178

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            +      +V+T  +L+D++ K G    A  +   M +  ++ D+V YN L+ G+ +  +
Sbjct: 179 LN---IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTE 235

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F  M+ +G  PDV +Y+ L+N  CK  ++DEA   +  +   G  P+ +SY T
Sbjct: 236 VVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNT 295

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC  G + +A++   +M     +P  + + +++DG+ + G L  AF +   M S  
Sbjct: 296 LIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTY 355

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N+  +N L+ A  + G++ DA  L  E+ + G+ P+V  Y  +I   C  G +  AL
Sbjct: 356 LKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEAL 415

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           + +  M   G  PD  +Y  +I+G     +   A  +  +++  G   D
Sbjct: 416 EAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 219/464 (47%), Gaps = 12/464 (2%)

Query: 109 PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           P  CTL         +I   C   ++     +  K I+ G  P ++T   L+N L K+G 
Sbjct: 8   PNTCTLNI-------LINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
             +A  +  +M      P+  TY   I G C++ E   A  LF  M   G + N VT++ 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L+H+LCK   + +A+     + A D    +  + T T L+          +A AL N+M 
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKD---ISPTIFTYTSLIQGLCNFSRWKEASALLNEMT 177

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
             NI  ++V +NVL++ FC  G + +A      M + G  PDV+TYN+L+       ++ 
Sbjct: 178 SLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVV 237

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA   + V+   G  PD  SY  +I G C    I +A++    M+ +   P    +N +I
Sbjct: 238 EARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLI 297

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
            G  + G L  A  +   M + G   N++T+  L+    + G +  AF L + M    + 
Sbjct: 298 HGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLK 357

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P++  YN+L+ A C  G++  A +L+ E+   G+ P++  YT +I G C  G + EA E 
Sbjct: 358 PNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEA 417

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           F  ++  G   D   + ++ + +  ++  D++R +H    +R++
Sbjct: 418 FRNMEDDGCPPDEFSYNVIIRGF--LQHKDESRAVHLIGEMRDR 459



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 199/390 (51%), Gaps = 3/390 (0%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P+  T N L+N  C++  ++    V+ +  ++   P   T+   I G  +V +  +A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + LF  M   G +P+  T+  +++ LCK G    A     ++   ++     +V+T + L
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKM---EEAGCQLNVVTYSTL 121

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           + S  K     +AL +++ M  K+I   I  Y  LI G C       A A   +M     
Sbjct: 122 IHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNI 181

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +P+V+T+N L++  CK+GK+  A      +++ GV PD ++Y +++ G  +  ++V+AR+
Sbjct: 182 MPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARK 241

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M+ K   P+   ++++I+GY +   +  A  + + M+  G + N  ++N LI    
Sbjct: 242 LFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLC 301

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G + +A  L K M  +G  P+++TY +L+   C  G++  A +L+  M    + P+++
Sbjct: 302 QLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLV 361

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            Y  L+   C  GN+K+A E+F+++  +GL
Sbjct: 362 MYNILVNAMCKSGNLKDARELFSELFVIGL 391



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 3/217 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I   C   +I  A  L  +MI +G+ P+ +++N L++ LC++G L +A  + 
Sbjct: 254 DVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLF 313

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           + M      PN  TY   + G+C+   L KA  LF  M +  ++PN V +NILV+A+CK 
Sbjct: 314 KNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKS 373

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L DA +   E+          +V   T +++   K G   +AL  + +M       D 
Sbjct: 374 GNLKDARELFSELFVIG---LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDE 430

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            +YNV+I GF  + D S A     +M  RGF+ D  T
Sbjct: 431 FSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 5/156 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L+E  D  K M   G +      +   +  ++   C  G +G A  L R M      P++
Sbjct: 306 LREAQDLFKNMHTNGNL-----PNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           + +N LVN +CK G+L+ A  +  E+  +   PN   Y   I G C+   LD+AL  F  
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 420

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           M ++G  P+  ++N+++    +      AV  +GE+
Sbjct: 421 MEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEM 456



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 49/105 (46%)

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           M L G+ P+  T N+LI   C L  + L   +  + ++ G+ P I+T+T LI G    G 
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             +A E+F  +   G   D   +  +     ++ E+  A  + +K
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKK 105


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 237/528 (44%), Gaps = 70/528 (13%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           +K M++TG +      D   +  +I   C  G++  A  +R +M   G   ++  +N ++
Sbjct: 311 VKEMKETGDI----VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMI 366

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           N LCK+G +E+   V++EM ++   P+  +YN  I GYCR   + KA  +   M  NG+ 
Sbjct: 367 NGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLA 426

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
              +T+N L+   C    + DA++     L    G A +++  ST+L D  FK G   QA
Sbjct: 427 ATTLTYNTLLKGFCSLHAIDDALRLW--FLMLKRGVAPNEISCSTLL-DGLFKAGKTEQA 483

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           L LW +   + +  +++ +N +ING C  G ++ A     +M +    PD +TY TL + 
Sbjct: 484 LNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDG 543

Query: 341 LCKQGKLDEASHF-----------------------------------YGVLSKTGVAPD 365
            CK G+L  A+H                                    +  +S  G++P+
Sbjct: 544 YCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPN 603

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++Y  +I G C  G++ +A      M+   + P   I + ++  + + G +  A  +  
Sbjct: 604 LVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQ 663

Query: 426 LMLSFGV---------------------------SSNVFTFNALILAETRGGSIFDAFSL 458
            +++  +                           S+NV  +N +I    + G I DA SL
Sbjct: 664 KLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVM-WNVIIFGLCKSGRIADAKSL 722

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            + +      PD FTY+ LI      G I  A  L D ML  G+TP+IITY  LI G C 
Sbjct: 723 FESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCK 782

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            G +  A  +F K+Q+ G++ + I +  L   Y +  ++ +A  + QK
Sbjct: 783 SGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQK 830



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 200/449 (44%), Gaps = 80/449 (17%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK   AL L ++ + +G   +V+T N ++N LCKIG + +A+ ++  M E+R  P+  T
Sbjct: 477 AGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLT 536

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y     GYC++ +L  A HL + M + G  P+    N                       
Sbjct: 537 YRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFN----------------------- 573

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                      IT   +   + K  D      + ++M  + +  ++V Y  LI G+C  G
Sbjct: 574 ---------SFITGHFIAKQWHKVND------IHSEMSARGLSPNLVTYGALIAGWCKEG 618

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA-------------------- 350
           ++  A   + +M+  G  P+V   + L++C  K+GK+DEA                    
Sbjct: 619 NLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSIST 678

Query: 351 ------SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
                 SH    ++        + +  II GLC  G I  A+    S+  K  +P+   +
Sbjct: 679 IEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTY 738

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           + +I G    G +  AFS+RD+MLS G++ N+ T+N+LI    + G +  A +L  ++  
Sbjct: 739 SSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQS 798

Query: 465 DGIFPDVFTYNLLIGASC----------------NLGHIHLALQLYDEMLRRGITPDIIT 508
            GI P+  TYN LI   C                  G++  A++L D+M+   + P+ IT
Sbjct: 799 KGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYIT 858

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           Y  LI G+   GNM+E  +++ ++   GL
Sbjct: 859 YCTLIHGYIKSGNMEEISKLYDEMHIRGL 887



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 203/441 (46%), Gaps = 4/441 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G++ +AL +   M + G  P + + N L+N+L + GD   A  V  +M      P+  T
Sbjct: 161 AGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFT 220

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
                  YCR   + +A+     M   G+  N V ++ ++   C  G   DA + L  + 
Sbjct: 221 VAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESL- 279

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLN 309
                  + +V+T T+L+  Y K+G   +A  +  +M +  +I  D VAY ++ING+C  
Sbjct: 280 --QRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQR 337

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G +  A     +M   G   ++  YNT++N LCK G+++E       +   G+ PD+ SY
Sbjct: 338 GRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSY 397

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            T+I G C  G + KA E    M+   +      +N ++ G+     + +A  +  LML 
Sbjct: 398 NTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLK 457

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            GV+ N  + + L+    + G    A +L KE L  G+  +V T+N +I   C +G +  
Sbjct: 458 RGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAE 517

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A +L D M      PD +TY  L  G+C  G +  A  +  K++ LG A     F     
Sbjct: 518 AEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFIT 577

Query: 550 RYRRMKESDKARDIHQKWLLR 570
            +   K+  K  DIH +   R
Sbjct: 578 GHFIAKQWHKVNDIHSEMSAR 598



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 132/531 (24%), Positives = 213/531 (40%), Gaps = 84/531 (15%)

Query: 89  ALDLILKENLDR------LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRR 142
           + DL+L+ + D       L      G V C      R    ++  L   G  G A  +  
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGC--RPSLRSCNRLLNKLVQSGDPGMAAMVYG 207

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M   G +PD  T   +    C+ G + +A   + EM  M    N   Y+A +  YC + 
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
             + A  +  ++   G+ PN VT+ +LV   CK G + +A + + E+   + G    D +
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM--KETGDIVVDEV 325

Query: 263 TSTILMDSYFKNGDKFQALALWNDM---------------------------FQKNIQ-- 293
              ++++ Y + G    A  + N+M                            QK +Q  
Sbjct: 326 AYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM 385

Query: 294 ------TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
                  D  +YN LI+G+C  G +  AF     M++ G     +TYNTLL   C    +
Sbjct: 386 EDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAI 445

Query: 348 DEASHFYGVLSKTGVAPDQIS-----------------------------------YKTI 372
           D+A   + ++ K GVAP++IS                                   + T+
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTV 505

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I GLC  G + +A E L  M E    P+   +  + DGY + G L  A  + + M   G 
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           + +V  FN+ I              +  EM   G+ P++ TY  LI   C  G++H A  
Sbjct: 566 APSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACN 625

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           LY EM+  G+ P++   + L+      G + EA  V  K+    + ID IP
Sbjct: 626 LYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKL----VNIDMIP 672



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 186/411 (45%), Gaps = 56/411 (13%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC  G++  A  L  +M +    PD LT+  L +  CK+G L  A H++ +M  + 
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+   +N+FITG+    +  K   + S M+  G+ PN VT+  L+   CK+G L +A 
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEAC 624

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI------- 296
               E++   +     +V   + LM  ++K G   +A    N + QK +  D+       
Sbjct: 625 NLYFEMV---NNGMNPNVFICSALMSCFYKEGKVDEA----NLVLQKLVNIDMIPGCSIS 677

Query: 297 -----------------------VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                                  V +NV+I G C +G I+ A + F  +  + FLPD  T
Sbjct: 678 TIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFT 737

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y++L++     G +DEA     V+   G+ P+ I+Y ++I GLC  G + +A      + 
Sbjct: 738 YSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQ 797

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            K + P    +N +ID Y + G  + AF ++  M+  G                    + 
Sbjct: 798 SKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGY-------------------ME 838

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           +A  L  +M+ + + P+  TY  LI      G++    +LYDEM  RG+ P
Sbjct: 839 EAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 889



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 163/367 (44%), Gaps = 14/367 (3%)

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV----------LADDD 254
           D ALHLF    +   RP+ V+H  L+H L +     DA   L  +          LA+  
Sbjct: 85  DAALHLFRLAPS---RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVY 141

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
              T   ++  +L+ ++   G    AL +++ M +   +  + + N L+N    +GD   
Sbjct: 142 RDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGM 201

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A   + QM   G LPD  T   +    C+ G++ +A  F   +   G+  + ++Y  ++ 
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG-VS 433
             C  G    AR  L S+  K + P    + +++ GY + G +  A  +   M   G + 
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            +   +  +I    + G + DA  ++ EM   GI  ++F YN +I   C LG +    ++
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
             EM   G+ PD  +Y  LI G+C  G+M++A E+   +   GLA   + +  L K +  
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS 441

Query: 554 MKESDKA 560
           +   D A
Sbjct: 442 LHAIDDA 448



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 144/313 (46%), Gaps = 34/313 (10%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  G +  A  L  +M+  G  P+V   + L++   K G +++A+ V++++  +
Sbjct: 609 ALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNI 668

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P C+             E+DK  H+  T+A+       V  N+++  LCK G + DA
Sbjct: 669 DMIPGCSISTI---------EIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADA 719

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K L E L +   +   D  T + L+     +G   +A +L + M    +  +I+ YN L
Sbjct: 720 -KSLFESLRNK--RFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSL 776

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG- 361
           I G C +G +S A   F ++  +G  P+ ITYNTL++  CK+GK  EA      + + G 
Sbjct: 777 IYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGY 836

Query: 362 ---------------VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN- 405
                          V P+ I+Y T+I G    G++ +  +    M  + ++P   I N 
Sbjct: 837 MEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGNW 896

Query: 406 -----VIIDGYGR 413
                V+++ + R
Sbjct: 897 KRSDPVVVNNWNR 909



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 96/200 (48%), Gaps = 4/200 (2%)

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           +S+  +++     G +  A      M +    P     N +++   + GD   A  +   
Sbjct: 149 VSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQ 208

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M   GV  + FT   +  A  R G +  A    +EM   G+  ++  Y+ ++   C +G 
Sbjct: 209 MRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGW 268

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG-LAIDHIPFR 545
              A ++ + + R+G++P+++TYT L+KG+C  G M+EAE V  +++  G + +D + + 
Sbjct: 269 TEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYG 328

Query: 546 ILKKRY---RRMKESDKARD 562
           ++   Y    RM ++ + R+
Sbjct: 329 MMINGYCQRGRMDDATRVRN 348


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 211/444 (47%), Gaps = 5/444 (1%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           + L  +RD     C  E D   + AV++ LC+  + G    L  +M++    P+++T N 
Sbjct: 247 EALHLLRDLPSFGC--EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 304

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           L++ LC+ G  E+   V+ +M E   +P+   Y   I G C+   L+ A  + + M + G
Sbjct: 305 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 364

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           ++PN V +N L+  LC      +  + L E+    D     D +T  IL+D + +NG   
Sbjct: 365 LKPNVVCYNTLLKGLCSAERWEETEELLAEMF---DKDCPLDDVTFNILVDFFCQNGLVD 421

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           + + L   M +     D++ Y  +INGFC  G I  A      M   G  P+ I+Y  +L
Sbjct: 422 RVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVL 481

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             LC   +  +A      + + G   + I++ T+I  LC  G + +A E L  ML     
Sbjct: 482 KGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCS 541

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P+   ++ +IDG G+ G    A  + ++M++ G+S N   ++++  A +R G I     +
Sbjct: 542 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQM 601

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
              +    I  D   YN +I + C  G    A++    M+  G  P+  TYT LI+G  +
Sbjct: 602 FDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLAS 661

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHI 542
            G +KEA+E+  ++ + G    H+
Sbjct: 662 EGFVKEAQEMLTELCSKGALRKHL 685



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 199/455 (43%), Gaps = 4/455 (0%)

Query: 106 DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCK 165
           D  P R         HV ++   C GG   +A+ +   +  +G   DV   N ++N +C 
Sbjct: 183 DEMPRRGCAPIPPMYHV-ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICD 241

Query: 166 IGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
            G +++A H++R++      P+  +YNA + G C          L   M      PN VT
Sbjct: 242 QGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVT 301

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
            N L+  LC+ GL     + L +++   +   T D+     ++D   K G    A  + N
Sbjct: 302 FNTLISYLCRNGLFERVHEVLAQMV---EHGCTPDIRMYATIIDGICKEGHLEVAHEILN 358

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M    ++ ++V YN L+ G C             +M  +    D +T+N L++  C+ G
Sbjct: 359 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNG 418

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
            +D        + + G  PD I+Y T+I G C  G I +A   L SM      P    + 
Sbjct: 419 LVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 478

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
           +++ G        +A  +   M+  G   N  TFN LI    + G +  A  L K+ML++
Sbjct: 479 IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 538

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G  PD+ +Y+ +I      G    AL+L + M+ +G++P+ I Y+ +       G + + 
Sbjct: 539 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 598

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            ++F  IQ   +  D + +  +     +  E+++A
Sbjct: 599 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERA 633



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 165/359 (45%), Gaps = 6/359 (1%)

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YNA + GYCR  +L+ A  L + +    + PN  T+  +V ALC +G + DA+  L E+ 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEM- 185

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
               G A    +   IL ++  + G    A+ +  D+  +    D+   N+++N  C  G
Sbjct: 186 -PRRGCAPIPPMYHVIL-EAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQG 243

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A      +   G  PDV++YN +L  LC   +          + +    P+ +++ 
Sbjct: 244 SVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFN 303

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T+I  LC +G   +  E L  M+E    P+  ++  IIDG  + G L  A  I + M S+
Sbjct: 304 TLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSY 363

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+  NV  +N L+          +   L  EM       D  T+N+L+   C  G +   
Sbjct: 364 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRV 423

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           ++L ++ML  G  PD+ITYT +I G C  G + EA  +   +   G   + I + I+ K
Sbjct: 424 IELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 482



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/443 (22%), Positives = 192/443 (43%), Gaps = 38/443 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  V+R LC  G+I  AL +  +M ++G  P    ++ ++   C+ G    A  V+ ++ 
Sbjct: 162 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 221

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               + +    N  +   C    +D+ALHL   + + G  P+ V++N ++  LC     G
Sbjct: 222 ARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 281

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
              + + E                                      M +     +IV +N
Sbjct: 282 CVQELMEE--------------------------------------MVRMACPPNIVTFN 303

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+  C NG          QM++ G  PD+  Y T+++ +CK+G L+ A      +   
Sbjct: 304 TLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSY 363

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+ + Y T+++GLC      +  E L  M +K    +   +N+++D + + G +   
Sbjct: 364 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRV 423

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + ML  G   +V T+  +I    + G I +A  L K M   G  P+  +Y +++  
Sbjct: 424 IELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 483

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C+      A  L  +M+++G   + IT+  LI   C +G +++A E+  ++   G + D
Sbjct: 484 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 543

Query: 541 HIPFRILKKRYRRMKESDKARDI 563
            I +  +     +  ++D+A ++
Sbjct: 544 LISYSTVIDGLGKAGKTDEALEL 566


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 221/450 (49%), Gaps = 3/450 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   +  VI  LC       A  + ++MI  G  P++ T+N L++    IG  ++  
Sbjct: 234 IPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVV 293

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EMS   P PNC TY + +   C+     +A   F +M   GI+P+  T+ I++H  
Sbjct: 294 RMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGY 353

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
             KG L +    L  ++A  +G + +  I + I   +Y K G   +A+ ++N M Q+ + 
Sbjct: 354 ATKGALSEMHDLLNLMVA--NGISPNHHIFN-IFFSAYAKCGIIDKAMDIFNKMRQQGLS 410

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D V+Y  LI+  C  G +  A   F QM+  G  PD++ +++L+  LC   K ++    
Sbjct: 411 PDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEEL 470

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  +   G+ P+ + + TI+  LC  G +++ +  + S+    V P+   +N +IDG+  
Sbjct: 471 FFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCL 530

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G +  A  + + M+S G+  + F++N L+    + G I  A+S  ++ML +GI P V T
Sbjct: 531 AGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVT 590

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN ++           A +LY  M+  G   DI TY  ++ G C    + EA ++F  + 
Sbjct: 591 YNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLC 650

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           + GL ++ I F I+     +    + A D+
Sbjct: 651 SKGLQLNIITFNIMIGALLKGGRKEDAMDL 680



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 211/454 (46%), Gaps = 7/454 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L+ L  M D     C    +   +  VI      G++     L  +M+ +G  PDV+
Sbjct: 182 EEALELLHMMADDQVWSCP--PNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVV 239

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  +++ LCK    ++A+ V ++M +    PN  TYN  I GY  + +  + + +   M
Sbjct: 240 TYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEM 299

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS-TILMDSYFK 273
           +  G +PN  T+  L++ LCK G   +A  F   ++    GK     +T+  I++  Y  
Sbjct: 300 SAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMI----GKGIKPSVTTYGIMLHGYAT 355

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +   L N M    I  +   +N+  + +   G I  A   F +M ++G  PD ++
Sbjct: 356 KGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVS 415

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y  L++ LCK G++D+A   +  +   GV PD + + +++ GLC      K  E    ML
Sbjct: 416 YGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEML 475

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
              + P    +N I+    + G +     + D +   GV  +V ++N LI      G+I 
Sbjct: 476 NVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTID 535

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L + M+  G+ PD F+YN L+   C  G I  A   + +ML  GITP ++TY  ++
Sbjct: 536 EASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTIL 595

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G        EA+E++  +   G   D   + I+
Sbjct: 596 HGLFQTKRFSEAKELYLNMINSGTKWDIYTYNII 629



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 188/390 (48%), Gaps = 1/390 (0%)

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
             P+  T++ L+   C++G LE        + +     +    N  + G C    + +A+
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 209 H-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M   G  P+ V++NIL+  LC +    +A++ L  +  D       +V++ + +
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           ++ +F  G   +   L+ +M  + I  D+V Y  +I+G C       A A F QM+  G 
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P++ TYN L++     GK  E       +S  G  P+  +Y +++  LC +G   +AR 
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
           F  SM+ K + P    + +++ GY   G LS    + +LM++ G+S N   FN    A  
Sbjct: 330 FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYA 389

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G I  A  +  +M   G+ PD  +Y  LI A C LG +  A   +++M+  G+TPDI+
Sbjct: 390 KCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIV 449

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            ++ L+ G C     ++ EE+F ++  +G+
Sbjct: 450 VFSSLVYGLCTVDKWEKVEELFFEMLNVGI 479



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 233/514 (45%), Gaps = 45/514 (8%)

Query: 95  KENLDRLKTMRDTGPVR--CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           KE +  L+ M   GP    CT       + +++  LC  G+   A +    MI KG  P 
Sbjct: 290 KEVVRMLEEMSAGGPKPNCCT-------YGSLLNYLCKNGRCREARFFFDSMIGKGIKPS 342

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V T+  +++     G L +   ++  M     SPN   +N F + Y +   +DKA+ +F+
Sbjct: 343 VTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFN 402

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDA-VKF---LGEVLADD--------DGKATSD 260
            M   G+ P+ V++  L+ ALCK G + DA VKF   + E +  D         G  T D
Sbjct: 403 KMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVD 462

Query: 261 ---------------------VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
                                V  +TIL +   K G   +   L + +    ++ D+++Y
Sbjct: 463 KWEKVEELFFEMLNVGIHPNIVFFNTILCN-LCKEGRVMEGQRLVDSIECMGVRPDVISY 521

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA-SHFYGVLS 358
           N LI+G CL G I  A      M+  G  PD  +YNTLL+  CK G++D A SHF  +LS
Sbjct: 522 NTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLS 581

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G+ P  ++Y TI+ GL       +A+E  L+M+      + + +N+I++G  +   + 
Sbjct: 582 -NGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVD 640

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   + S G+  N+ TFN +I A  +GG   DA  L   +  +G+  +V TY L++
Sbjct: 641 EAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVV 700

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
                 G +     L+  M + G  P+      L++    RG++  A    +K+     +
Sbjct: 701 ENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFS 760

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           ++     +L   +   +    A+ + +K+ + N+
Sbjct: 761 VEASTTSMLISIFSSDEYQHHAKSLPKKYRILNE 794



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 206/447 (46%), Gaps = 18/447 (4%)

Query: 107 TGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC-- 164
             P RCT       +  +I   C  G +         +++ G   D +  N L+N LC  
Sbjct: 90  VAPNRCT-------YSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDG 142

Query: 165 -KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI---R 220
            ++G  E  D +++ M E+   P+  +YN  + G C     ++AL L   MA++ +    
Sbjct: 143 KRVG--EAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCP 200

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           PN V+++ +++    +G +        E++   D     DV+T T ++D   K     +A
Sbjct: 201 PNVVSYSTVINGFFTEGQVDKPYNLFLEMM---DRGIPPDVVTYTTVIDGLCKAQLFDRA 257

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
            A++  M    ++ +I  YN LI+G+   G          +M   G  P+  TY +LLN 
Sbjct: 258 EAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNY 317

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           LCK G+  EA  F+  +   G+ P   +Y  ++ G    G + +  + L  M+   + P 
Sbjct: 318 LCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPN 377

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
            HI+N+    Y +CG +  A  I + M   G+S +  ++ ALI A  + G + DA     
Sbjct: 378 HHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFN 437

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           +M+ +G+ PD+  ++ L+   C +       +L+ EML  GI P+I+ +  ++   C  G
Sbjct: 438 QMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEG 497

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            + E + +   I+ +G+  D I +  L
Sbjct: 498 RVMEGQRLVDSIECMGVRPDVISYNTL 524



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/493 (23%), Positives = 218/493 (44%), Gaps = 31/493 (6%)

Query: 108  GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
            G V   L+ D   +  ++   C  G+I +A    RKM+  G  P V+T+N +++ L +  
Sbjct: 543  GMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTK 602

Query: 168  DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
               +A  +   M       +  TYN  + G C+ N +D+A+ +F  + + G++ N +T N
Sbjct: 603  RFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFN 662

Query: 228  ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            I++ AL K G   DA+     + A+       +V+T  +++++  + G   +  +L++ M
Sbjct: 663  IMIGALLKGGRKEDAMDLFAAIPANG---LVQNVVTYRLVVENLIEEGSLEEFDSLFSAM 719

Query: 288  FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC----- 342
             +     +    N L+      GDIS A AY  ++ +R F  +  T + L++        
Sbjct: 720  EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQ 779

Query: 343  -----------------------KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
                                   K  ++D+A   +  +   G+ PD ++Y TI+ GL   
Sbjct: 780  HHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQT 839

Query: 380  GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
            G   +A+E  LSM+        + +N+I++G  +   +  AF +   + S G+  N+ TF
Sbjct: 840  GRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITF 899

Query: 440  NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
            N +I A  +GG   DA  L   +  +G+ PDV TY L+       G +     L+  M +
Sbjct: 900  NIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEK 959

Query: 500  RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
             G   D      L++    RG++  A    +K+     +++      L   + R +    
Sbjct: 960  SGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHH 1019

Query: 560  ARDIHQKWLLRNK 572
            A+ + +K+ L N+
Sbjct: 1020 AKSLPEKYRLLNE 1032



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 4/315 (1%)

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           K   +  T +IL+  + + G      A +  + +   + D +  N L+NG C    +  A
Sbjct: 89  KVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEA 148

Query: 316 FAYFCQ-MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV---APDQISYKT 371
                Q M + G +PD ++YN LL  LC + + +EA     +++   V    P+ +SY T
Sbjct: 149 MDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYST 208

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G    G + K     L M+++ + P+   +  +IDG  +      A ++   M+  G
Sbjct: 209 VINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNG 268

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           V  N+ T+N LI      G   +   + +EM   G  P+  TY  L+   C  G    A 
Sbjct: 269 VKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREAR 328

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
             +D M+ +GI P + TY  ++ G+  +G + E  ++   +   G++ +H  F I    Y
Sbjct: 329 FFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAY 388

Query: 552 RRMKESDKARDIHQK 566
            +    DKA DI  K
Sbjct: 389 AKCGIIDKAMDIFNK 403



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 4/176 (2%)

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           V P    ++++I  + R G L + F+   L+L  G   +    N L+     G  + +A 
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 457 S-LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI---TPDIITYTEL 512
             L + M   G  PD  +YN+L+   CN      AL+L   M    +    P++++Y+ +
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           I G    G + +   +F ++   G+  D + +  +     + +  D+A  + Q+ +
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMI 265


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 181/353 (51%), Gaps = 7/353 (1%)

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-- 257
           ++N    A   +  + + G  P+    N+L+H LCK+  + +A    GE+     GK   
Sbjct: 202 KLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI-----GKRGL 256

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
              V++   L++ Y K+G+  Q   L   M +  +  D+  Y+VLING C  G +  A  
Sbjct: 257 RPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANK 316

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            F +M  RG +P+ +T+ TL+N  C  G+ D     Y  + + GV PD I+Y T+I GLC
Sbjct: 317 LFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLC 376

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             GD+ +A++ ++ M ++ + P+   + ++IDG  + GDL +A  IR  M+  G+  +  
Sbjct: 377 KVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNV 436

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            F ALI    R G + +A    +EML  GI PD  TY ++I   C  G +    +L  EM
Sbjct: 437 AFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM 496

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
              G  P ++TY  L+ G C +G MK A  +   +  LG+  D I + IL +R
Sbjct: 497 QCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLER 549



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 172/354 (48%), Gaps = 11/354 (3%)

Query: 98  LDRLKTMRDTGP--------VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
            DRL  +  T P        + C    D  +   ++  LC   KI  A  L  ++ ++G 
Sbjct: 197 FDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGL 256

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P V++ N L+N  CK G+L++   + R M E R  P+  TY+  I G C+  +LD A  
Sbjct: 257 RPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANK 316

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           LF  M + G+ PN VT   L++  C  G     ++   ++L         DVIT   L++
Sbjct: 317 LFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG---VKPDVITYNTLIN 373

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K GD  +A  L  +M Q+ ++ D   Y +LI+G C  GD+ SA     +M+K G   
Sbjct: 374 GLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIEL 433

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           D + +  L++  C++G++ EA      + + G+ PD  +Y  +I G C  GD+    + L
Sbjct: 434 DNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLL 493

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
             M     VP    +NV+++G  + G + NA  + D ML+ GV  +  T+N L+
Sbjct: 494 KEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 145/287 (50%), Gaps = 3/287 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G +     L+R M++    PDV T++ L+N LCK G L+ A+ +  EM + 
Sbjct: 265 TLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDR 324

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  T+   I G+C     D  + ++  M   G++P+ +T+N L++ LCK G L +A
Sbjct: 325 GLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREA 384

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K + E+          D  T T+L+D   K GD   AL +  +M ++ I+ D VA+  L
Sbjct: 385 KKLVIEMTQRG---LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTAL 441

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC  G +  A     +ML+ G  PD  TY  +++  CK+G +         +   G 
Sbjct: 442 ISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGH 501

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
            P  ++Y  ++ GLC  G +  A   L +ML   VVP+   +N++++
Sbjct: 502 VPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLE 548



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 131/258 (50%), Gaps = 3/258 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  LC  G++  A  L  +M  +G VP+ +T   L+N  C  G  +    + 
Sbjct: 294 DVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIY 353

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           ++M      P+  TYN  I G C+V +L +A  L   M   G++P++ T+ +L+   CK+
Sbjct: 354 QQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKE 413

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A++   E++ +       D +  T L+  + + G   +A     +M +  I+ D 
Sbjct: 414 GDLESALEIRKEMVKEG---IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDD 470

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y ++I+GFC  GD+ + F    +M   G +P V+TYN LLN LCKQG++  A+     
Sbjct: 471 ATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDA 530

Query: 357 LSKTGVAPDQISYKTIIQ 374
           +   GV PD I+Y  +++
Sbjct: 531 MLNLGVVPDDITYNILLE 548



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 98/226 (43%)

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           ++GK   +S F  VL   G     + +  ++      G    A +    + + ++    H
Sbjct: 132 RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFH 191

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
               + D   +    S A++  + +L  G   +V  FN L+    +   I +A  L  E+
Sbjct: 192 SCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI 251

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
              G+ P V ++N LI   C  G++    +L   M+   + PD+ TY+ LI G C  G +
Sbjct: 252 GKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQL 311

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            +A ++F ++   GL  + + F  L   +     +D   +I+Q+ L
Sbjct: 312 DDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQML 357


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 219/477 (45%), Gaps = 36/477 (7%)

Query: 103 TMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNE 162
           T  DT P +   +     H+  +  LC  GK   AL+   +M+++G  PDV+    L+  
Sbjct: 62  TSSDTRPQQQHYDFRDTHHMKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKG 121

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           L      EKA  V+ E+ E    P+   YNA I+G+CR +  D A  +   M   G  P+
Sbjct: 122 LFTSKRTEKAVRVM-EILEQYGDPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPD 180

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
            VT+NIL+ +LC +G L  A+K + ++L D+       VIT TIL+++   +G    A+ 
Sbjct: 181 VVTYNILIGSLCARGKLDLALKVMDQLLEDN---CNPTVITYTILIEATIIHGSIDDAMR 237

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY------------------------ 318
           L ++M  + +Q D+  YNV++ G C  G +  AF +                        
Sbjct: 238 LLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEG 297

Query: 319 --------FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
                      M+ +G  P+++TY+ L++ LC+ GK  EA     V+ + G+ PD   Y 
Sbjct: 298 RWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYD 357

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +I   C  G +  A  F+  M+    +P+   +N I+    + G    A +I   +   
Sbjct: 358 PLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEV 417

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G   N  ++N +  A    G    A ++  EML +G+ PD  TYN LI + C  G +  A
Sbjct: 418 GCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEA 477

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + L  +M R    P +I+Y  ++ G C    + +A EV A +   G   +   + +L
Sbjct: 478 IGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLL 534



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 204/428 (47%), Gaps = 7/428 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AVI   C   +   A  +  +M  +G  PDV+T+N L+  LC  G L+ A  V+ ++ E 
Sbjct: 151 AVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLED 210

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P   TY   I        +D A+ L   M + G++P+  T+N++V  +CK+GL+  A
Sbjct: 211 NCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRA 270

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +F+   L         +++   +L +  ++ G++     L +DM  K  + +IV Y+VL
Sbjct: 271 FEFVSN-LNTTPSLNLYNLLLKGLLNEGRWEAGER-----LMSDMIVKGCEPNIVTYSVL 324

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+  C +G    A      M ++G  PD   Y+ L++  CK+GK+D A  F   +   G 
Sbjct: 325 ISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGW 384

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y TI+  LC  G   +A      + E    P    +N +       GD   A +
Sbjct: 385 LPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALT 444

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   MLS GV  +  T+N+LI +  R G + +A  L  +M      P V +YN+++   C
Sbjct: 445 MILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLC 504

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               I  A+++   M+  G  P+  TYT L++G    G    A E+   + ++  AI   
Sbjct: 505 KAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSLVSMN-AISQD 563

Query: 543 PFRILKKR 550
            FR L+K+
Sbjct: 564 LFRRLQKQ 571



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 43/231 (18%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E +D L+ M++ G     L  D   +  +I   C  GK+  A+     MI  G +PD++ 
Sbjct: 336 EAVDVLRVMKEKG-----LNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVN 390

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCA-------------------------- 189
           +N ++  LCK G  ++A ++ +++ E+   PN +                          
Sbjct: 391 YNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEML 450

Query: 190 ---------TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                    TYN+ I+  CR   +D+A+ L   M     +P  +++NI++  LCK   + 
Sbjct: 451 SNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIV 510

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
           DA++ L  ++   D     +  T T+L++     G +  A+ L   +   N
Sbjct: 511 DAIEVLAVMV---DNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSLVSMN 558


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 225/496 (45%), Gaps = 31/496 (6%)

Query: 63  QCRSKTRHWFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTG-----PVRCTLETD 117
           QC S  R  F +  S + GN           L +   R K  R+ G      +  T   D
Sbjct: 46  QCLSSPRFGFQH--SVHTGNA----------LLDVFARTKRHREAGNLLKNELATTFLPD 93

Query: 118 YRRHVAVIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGD-LEKADHV 175
                 +I   CL  +   A  + R+M +  G  P + THN +++ LCK G  L   DH 
Sbjct: 94  VETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHF 153

Query: 176 IREMSEMRPSPNCA----TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
                E   +  C     TY A +    +  ++  A+ L   +  NG  P   T+N L++
Sbjct: 154 -----ETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLN 208

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            LCK G L +A+  L +++   D   T DV+T T L+D   K    F+A  L+ +M  + 
Sbjct: 209 GLCKMGRLEEAIDLLRKIV---DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG 265

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           +  D V Y  LI G    G I  A + +  M  +G +PDV+T +T+++ LCK G++  A 
Sbjct: 266 LVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAV 325

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
             +  +   G+AP+++ Y  +I GLC    +  A E L  M +    P+   +N++IDG 
Sbjct: 326 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 385

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            + GD+  A +  D ML  G   +V+T+N L+    + G+   A  +  +M      P+V
Sbjct: 386 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNV 445

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TY  LI   C    +  A   +  M  RG  PD   Y+ L+ G C  G ++    +F +
Sbjct: 446 VTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDE 505

Query: 532 IQTLGLAIDHIPFRIL 547
           ++  G+A      R++
Sbjct: 506 MERSGVANSQTRTRLI 521



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 175/409 (42%), Gaps = 39/409 (9%)

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V T N L++   +     +A ++++        P+  T+N  ITGYC   E ++A  +  
Sbjct: 59  VHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIR 118

Query: 213 TMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
            M  + G+ P+  THN+++H LCK G          +VLA  D   T+     TI     
Sbjct: 119 EMEEDYGVAPSLKTHNLVLHGLCKSG----------KVLAAMDHFETTTTNGCTI----- 163

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
                                  DI  Y  +++    N  I  A A   ++   G  P +
Sbjct: 164 -----------------------DIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTI 200

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            TYN LLN LCK G+L+EA      +   G  PD ++Y ++I GL       +A +    
Sbjct: 201 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKE 260

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M  + +V +   +  +I G  + G +  A S+   M S G   +V T + +I    + G 
Sbjct: 261 MALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGR 320

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           I  A  + K M   G+ P+   Y+ LI   C    +  AL++  +M +   TPD ITY  
Sbjct: 321 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 380

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           LI G C  G+++ A   F ++   G   D   + IL   + +   +D A
Sbjct: 381 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAA 429



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 136/290 (46%), Gaps = 38/290 (13%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+IR L   GKI  A  + + M  +G VPDV+T + +++ LCK G +  A  + + M 
Sbjct: 273 YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSME 332

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               +PN   Y+A I G C+  ++D AL + + M      P+ +T+NIL+  LCK G + 
Sbjct: 333 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 392

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A  F  E+L   +     DV T  IL+  + K G+   A  +++DM   +   ++V Y 
Sbjct: 393 AARAFFDEML---EAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYG 449

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK-------------- 346
            LI+G C    ++ A  YF  M +RG  PD   Y++L++ LCK GK              
Sbjct: 450 TLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERS 509

Query: 347 --------------------LDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
                               +DEA   +  + K G+ P   +Y +II  L
Sbjct: 510 GVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISTL 558



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 1/189 (0%)

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS-IRDLMLSFGVSSNVFTFNAL 442
           +A   L + L  + +P+   WNV+I GY    +   AF+ IR++   +GV+ ++ T N +
Sbjct: 77  EAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLV 136

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +    + G +  A    +    +G   D+ TY  ++        I  A+ L +++   G 
Sbjct: 137 LHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGC 196

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
           TP I TY  L+ G C  G ++EA ++  KI   G   D + +  L     + K S +A  
Sbjct: 197 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 256

Query: 563 IHQKWLLRN 571
           + ++  LR 
Sbjct: 257 LFKEMALRG 265



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 2/114 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   ++  A    + M ++G  PD   ++ LV+ LCK G LE    +  EM E  
Sbjct: 451 LISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM-ERS 509

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
              N  T    I   C+ N +D+A+ LF+ +   G+ P+   +N ++  L K  
Sbjct: 510 GVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISTLIKSA 562


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 210/424 (49%), Gaps = 3/424 (0%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            ++R LCL  ++   L L       G +P V+ +N L++  C+ GD+ +   ++ EM    
Sbjct: 1153 LVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKG 1212

Query: 184  PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              P   TY + I    +  +L+K   LF  M   G  PN   +N ++ ALCK      A+
Sbjct: 1213 FLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAM 1272

Query: 244  KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
              L ++ A        D+IT   L+      G   +A     +  ++ +  + ++Y  LI
Sbjct: 1273 VILKQMFASG---CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLI 1329

Query: 304  NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            +GFC+ G++  A     +M+ RG  PDV+T+  L++ L   GK+ EA      +++  V 
Sbjct: 1330 HGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF 1389

Query: 364  PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            PD   Y  +I GLC    +  A+  L  MLEK+V P+  ++  +IDG+ R  +L +A  I
Sbjct: 1390 PDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKI 1449

Query: 424  RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
             + M   G+  ++ + NA+I    + G + +A      M   G  PD FTY  +I     
Sbjct: 1450 FEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAK 1509

Query: 484  LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
             G+++ AL+   +M++R   P+++TY+ LI G+C  G+   AE +FA +Q   L+ + + 
Sbjct: 1510 QGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVT 1569

Query: 544  FRIL 547
            + IL
Sbjct: 1570 YTIL 1573



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 184/390 (47%), Gaps = 3/390 (0%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            +I   C  G +G  L L  +M  KG +P ++T+  L+N L K GDLEK   +  EM +  
Sbjct: 1188 LIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRG 1247

Query: 184  PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             SPN   YN+ I   C+     +A+ +   M  +G  P+ +T N L+  LC +G +  A 
Sbjct: 1248 FSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAE 1307

Query: 244  KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             FL E +  +      + ++ T L+  +   G+   A  L  +M  +    D+V +  LI
Sbjct: 1308 HFLREAIRRE---LNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALI 1364

Query: 304  NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            +G  + G +S A     +M +R   PDV  YN L++ LCK+  L  A +    + +  V 
Sbjct: 1365 HGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQ 1424

Query: 364  PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            PD+  Y T+I G     ++  AR+    M  K + P+    N +I GY + G +S A   
Sbjct: 1425 PDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILC 1484

Query: 424  RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
               M   G   + FT+  +I    + G++  A     +M+     P+V TY+ LI   C 
Sbjct: 1485 MSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCK 1544

Query: 484  LGHIHLALQLYDEMLRRGITPDIITYTELI 513
             G    A  L+  M    ++P+++TYT LI
Sbjct: 1545 TGDTDFAEGLFANMQAEALSPNVVTYTILI 1574



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 217/470 (46%), Gaps = 20/470 (4%)

Query: 87   FNALDLILKENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWL-RRK 143
            F+A+D       D L++M   G  P R  L        A++      G +G A  +  R 
Sbjct: 1057 FDAVD-------DTLQSMSLAGAAPTRACLG-------ALVAAYADAGMLGKATKMCERV 1102

Query: 144  MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
              Q G++P+V   N L+  L +    + A  +  EM       +  +    + G C    
Sbjct: 1103 REQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERR 1162

Query: 204  LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            +++ L L       G  P+ V +N+L+   C++G +G  +  LGE+   +       ++T
Sbjct: 1163 VEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEM---ETKGFLPTLVT 1219

Query: 264  STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
               L++   K GD  +  +L+ +M ++    ++  YN +I+  C     + A     QM 
Sbjct: 1220 YGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMF 1279

Query: 324  KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
              G  PD+IT+NTL+  LC +G + +A HF     +  + P+Q+SY  +I G C+ G+++
Sbjct: 1280 ASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELM 1339

Query: 384  KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
             A + L+ M+ +   P+   +  +I G    G +S A  +R+ M    V  +V  +N LI
Sbjct: 1340 VASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLI 1399

Query: 444  LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                +   +  A ++ +EML   + PD F Y  LI       ++  A ++++ M  +GI 
Sbjct: 1400 SGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGIC 1459

Query: 504  PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
            PDI++   +IKG+C  G M EA    + ++ +G   D   +  +   Y +
Sbjct: 1460 PDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAK 1509



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 185/434 (42%), Gaps = 33/434 (7%)

Query: 151  PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
            P  L H+ L+  L +    +  D  ++ MS    +P  A   A +  Y     L KA  +
Sbjct: 1039 PTPLAHSALLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKM 1098

Query: 211  FSTMANNGIRPNRVTH-NILVHALCKKGLLGDAVKFLGEVLADDDGK------------- 256
               +         VTH N L+  L ++    DA K   E+L  D G              
Sbjct: 1099 CERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLC 1158

Query: 257  -------------------ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
                                   V+   +L+D Y + GD  + L L  +M  K     +V
Sbjct: 1159 LERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLV 1218

Query: 298  AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
             Y  LIN     GD+    + F +M KRGF P+V  YN++++ LCK     +A      +
Sbjct: 1219 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQM 1278

Query: 358  SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
              +G  PD I++ T+I GLC  G + KA  FL   + + + P    +  +I G+   G+L
Sbjct: 1279 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 1338

Query: 418  SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
              A  +   M+  G + +V TF ALI      G + +A  ++++M    +FPDV  YN+L
Sbjct: 1339 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 1398

Query: 478  IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            I   C    +  A  + +EML + + PD   Y  LI G     N+ +A ++F  ++  G+
Sbjct: 1399 ISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGI 1458

Query: 538  AIDHIPFRILKKRY 551
              D +    + K Y
Sbjct: 1459 CPDIVSCNAMIKGY 1472



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 190/448 (42%), Gaps = 53/448 (11%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +VI  LC       A+ + ++M   G  PD++T N L+  LC  G + KA+H +RE    
Sbjct: 1257 SVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRR 1316

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              +PN  +Y   I G+C   EL  A  L   M   G  P+ VT   L+H L   G + +A
Sbjct: 1317 ELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEA 1376

Query: 243  VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +  + E + +   +   DV    +L+    K      A  +  +M +KN+Q D   Y  L
Sbjct: 1377 L-IVREKMTER--QVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATL 1433

Query: 303  INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            I+GF  + ++  A   F  M  +G  PD+++ N ++   C+ G + EA      + K G 
Sbjct: 1434 IDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGC 1493

Query: 363  APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             PD+ +Y T+I G    G++  A  +L  M+++   P    ++ +I+GY + GD   A  
Sbjct: 1494 IPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEG 1553

Query: 423  IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT--------- 473
            +   M +  +S NV T+  LI +  +   +  A    + MLL+   P+  T         
Sbjct: 1554 LFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLT 1613

Query: 474  -----------------------------------------YNLLIGASCNLGHIHLALQ 492
                                                     YN +I + C    +  AL 
Sbjct: 1614 SCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALD 1673

Query: 493  LYDEMLRRGITPDIITYTELIKGHCARG 520
              + M ++G  P+ IT+  L+ G C+ G
Sbjct: 1674 FKNRMAKKGYVPNPITFLSLLYGFCSVG 1701



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            A+I  L + GK+  AL +R KM ++   PDV  +N L++ LCK   L  A +++ EM E 
Sbjct: 1362 ALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEK 1421

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               P+   Y   I G+ R   L  A  +F  M + GI P+ V+ N ++   C+ G++ +A
Sbjct: 1422 NVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEA 1481

Query: 243  VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +  +  +          D  T T ++  Y K G+   AL    DM ++  + ++V Y+ L
Sbjct: 1482 ILCMSNM---RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSL 1538

Query: 303  INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            ING+C  GD   A   F  M      P+V+TY  L+  L K+ K+  A  ++  +     
Sbjct: 1539 INGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHC 1598

Query: 363  APDQISYKTIIQGL-----------CIHGDIVKAREFLLSMLEKSVV----PEPHIWNVI 407
            +P+ ++   ++ GL           C +   V  ++ LL + +K V     P    +N I
Sbjct: 1599 SPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAI 1658

Query: 408  IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
            I    R   L  A   ++ M   G   N  TF +L+      G   +  ++         
Sbjct: 1659 IFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQEE 1718

Query: 468  FPDVFTYNLL 477
            F  +F Y  L
Sbjct: 1719 FEIIFRYKFL 1728


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 203/426 (47%), Gaps = 6/426 (1%)

Query: 117  DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP-DVLTHNYLVNELCKIGDLEKADHV 175
            D + +  +I  LC   K G A+ L  KM  KG    DV T+  +++ LCK G   +A  +
Sbjct: 1050 DAKTYGILINGLCKARKTGLAIKLHEKM--KGNCKGDVFTYGMIIDALCKDGMTTEALDM 1107

Query: 176  IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
              EM      P+   Y++ + G CR   L +AL  F  M   GI  +  T+N L+H L +
Sbjct: 1108 FSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSR 1167

Query: 236  KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
             GL  +   FL  ++   D   + D  T TIL+D   K G   +A  +   M  K  + D
Sbjct: 1168 AGLWKEVTWFLNLMV---DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPD 1224

Query: 296  IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
            I+ YN L+NG CL G +  A   F  +  RG   +V +YN L+N  CK  K+DEA  F+ 
Sbjct: 1225 ILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFE 1284

Query: 356  VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
             +   G+ P  ++Y T+I  LC  G +  A++  + M       +   + V++DG  + G
Sbjct: 1285 EMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNG 1344

Query: 416  DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
             L  A  +   +       N+  F+ L+    R G + +A+    E+  +G+ PD   YN
Sbjct: 1345 HLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYN 1404

Query: 476  LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            +LI   CN G +  A++L  +M  +G  PD IT+  +I+       + EA ++  +++  
Sbjct: 1405 ILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNR 1464

Query: 536  GLAIDH 541
              + D 
Sbjct: 1465 NFSPDE 1470



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 198/402 (49%), Gaps = 4/402 (0%)

Query: 132  GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
            G   T   + RK+   G  PD+ T N L++  C +  +     V     +    P+  T 
Sbjct: 960  GYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTV 1019

Query: 192  NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
               + G    N +  A+ LF  M   G+  +  T+ IL++ LCK    G A+K   ++  
Sbjct: 1020 TTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-- 1077

Query: 252  DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
               G    DV T  +++D+  K+G   +AL ++++M    I  D+V Y+ L++G C  G 
Sbjct: 1078 --KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGR 1135

Query: 312  ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
            +  A  +F +M  RG   DV TYN+L++ L + G   E + F  ++   G +PD  ++  
Sbjct: 1136 LKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTI 1195

Query: 372  IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
            +I GLC  G + +A++ L  M  K   P+   +N +++G    G L +A  + + +   G
Sbjct: 1196 LIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255

Query: 432  VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
            +  NVF++N LI    +   I +AF   +EM   G+ P   TYN LIGA C  G +  A 
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 1315

Query: 492  QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            +L+ EM   G    + TY  L+ G C  G+++EA ++F  I+
Sbjct: 1316 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIK 1357



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 195/403 (48%), Gaps = 4/403 (0%)

Query: 145  IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
            +++G  PD +T   LV  +     +  A  +  EM++     +  TY   I G C+  + 
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKT 1067

Query: 205  DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
              A+ L   M  N  + +  T+ +++ ALCK G+  +A+    E++         DV+  
Sbjct: 1068 GLAIKLHEKMKGN-CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIG---AGILPDVVVY 1123

Query: 265  TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
            + LMD   + G   +AL  + +M  + I  D+  YN LI+G    G       +   M+ 
Sbjct: 1124 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 1183

Query: 325  RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            RGF PD  T+  L++ LCK+GK+ EA     ++   G  PD ++Y T++ GLC+ G +  
Sbjct: 1184 RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLED 1243

Query: 385  AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
            A +   S+ ++ +      +N++I+GY +   +  AF   + M   G+  +  T+N LI 
Sbjct: 1244 ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIG 1303

Query: 445  AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
            A  + G +  A  L  EM   G F  + TY +L+   C  GH+  A+ L+  + +    P
Sbjct: 1304 ALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKP 1363

Query: 505  DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +I  ++ L+ G C  G ++EA + F +I   GL  D I + IL
Sbjct: 1364 NIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNIL 1406



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 215/463 (46%), Gaps = 14/463 (3%)

Query: 114  LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
             E D      +++ + +   I  A+ L  +M +KG + D  T+  L+N LCK     K  
Sbjct: 1012 FEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKA---RKTG 1068

Query: 174  HVIREMSEMRPSPNCA----TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
              I+   +M+   NC     TY   I   C+     +AL +FS M   GI P+ V ++ L
Sbjct: 1069 LAIKLHEKMKG--NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 1126

Query: 230  VHALCKKGLLGDAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMF 288
            +  LC+ G L +A++F  E+    +G+  S DV T   L+    + G   +     N M 
Sbjct: 1127 MDGLCRFGRLKEALEFFKEM----EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 1182

Query: 289  QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
             +    D   + +LI+G C  G +  A      M  +G  PD++TYNTL+N LC  G+L+
Sbjct: 1183 DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLE 1242

Query: 349  EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            +A+  +  L+  G+  +  SY  +I G C    I +A  F   M  K + P    +N +I
Sbjct: 1243 DATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLI 1302

Query: 409  DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
                + G +  A  +   M + G    + T+  L+    + G + +A  L + +      
Sbjct: 1303 GALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHK 1362

Query: 469  PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
            P++  +++L+   C  G +  A + +DE+ + G+ PD I Y  LI G C +G + EA ++
Sbjct: 1363 PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKL 1422

Query: 529  FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
              +++  G   D I F ++ +   +  E  +A  + ++   RN
Sbjct: 1423 LWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN 1465



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 163/334 (48%), Gaps = 8/334 (2%)

Query: 94   LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
            LKE L+  K M   G     +  D   + ++I  L   G      W    M+ +G  PD 
Sbjct: 1136 LKEALEFFKEMEGRG-----ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 1190

Query: 154  LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
             T   L++ LCK G + +A  ++  M      P+  TYN  + G C V +L+ A  LF +
Sbjct: 1191 FTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFES 1250

Query: 214  MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
            +A+ GI+ N  ++NIL++  CK   + +A +F  E+       +T   +T   L+ +  +
Sbjct: 1251 LADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPST---VTYNTLIGALCQ 1307

Query: 274  NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            +G    A  L+ +M        +  Y VL++G C NG +  A   F  + K    P++  
Sbjct: 1308 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEV 1367

Query: 334  YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
            ++ LL+ +C+ GKL+EA   +  +SK G+ PD I+Y  +I GLC  G + +A + L  M 
Sbjct: 1368 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 1427

Query: 394  EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            EK  +P+   +NVII    +  ++  A  + + M
Sbjct: 1428 EKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEM 1461



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 186/414 (44%), Gaps = 38/414 (9%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            +I  LC  G    AL +  +MI  G +PDV+ ++ L++ LC+ G L++A    +EM    
Sbjct: 1091 IIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 1150

Query: 184  PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             S +  TYN+ I G  R     +     + M + G  P+  T  IL+  LCK+G +G+A 
Sbjct: 1151 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 1210

Query: 244  KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            + L   L    GK   D++T   LM+     G    A  L+  +  + I+ ++ +YN+LI
Sbjct: 1211 QILE--LMRHKGKE-PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 1267

Query: 304  NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL-------------------------- 337
            NG+C +  I  AF +F +M  +G  P  +TYNTL                          
Sbjct: 1268 NGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQF 1327

Query: 338  ---------LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
                     L+ LCK G L+EA   +  + KT   P+   +  ++ G+C  G + +A + 
Sbjct: 1328 LKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQ 1387

Query: 389  LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
               + +  + P+   +N++I+G    G LS A  +   M   G   +  TFN +I    +
Sbjct: 1388 FDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLK 1447

Query: 449  GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
               I +A  L +EM      PD    ++L+  +      H AL      L++G+
Sbjct: 1448 ENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 1501



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 163/367 (44%), Gaps = 39/367 (10%)

Query: 230  VHALCKKGL--LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            V   C+ G+  L DA+K     L  +    T    T   L+ S  K G       ++  +
Sbjct: 916  VRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTD---TFNHLLASVAKLGYYSTVFPMYRKI 972

Query: 288  FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
                IQ D+   N+LI+  C    +   F  F   LKRGF PD +T  TL+  +  +  +
Sbjct: 973  NDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGI 1032

Query: 348  DEASHFYGVLSKTGVAPDQISYKTIIQGLC----------IH--------GDI------- 382
             +A   +  ++K G+  D  +Y  +I GLC          +H        GD+       
Sbjct: 1033 PDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMII 1092

Query: 383  ---------VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
                      +A +    M+   ++P+  +++ ++DG  R G L  A      M   G+S
Sbjct: 1093 DALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 1152

Query: 434  SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            ++V+T+N+LI   +R G   +       M+  G  PD FT+ +LI   C  G +  A Q+
Sbjct: 1153 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 1212

Query: 494  YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
             + M  +G  PDI+TY  L+ G C  G +++A ++F  +   G+ ++   + IL   Y +
Sbjct: 1213 LELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 1272

Query: 554  MKESDKA 560
             ++ D+A
Sbjct: 1273 DQKIDEA 1279



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 66/129 (51%)

Query: 438  TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            TFN L+ +  + G     F + +++   GI PD++T N+LI   C+L  +     ++   
Sbjct: 948  TFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGF 1007

Query: 498  LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
            L+RG  PD +T T L+KG      + +A ++F ++   GL  D   + IL     + +++
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKT 1067

Query: 558  DKARDIHQK 566
              A  +H+K
Sbjct: 1068 GLAIKLHEK 1076



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 42/82 (51%)

Query: 114  LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            LE D   +  +I  LC  G +  A+ L  +M +KG +PD +T N ++  L K  ++ +A 
Sbjct: 1396 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 1455

Query: 174  HVIREMSEMRPSPNCATYNAFI 195
             ++ EM     SP+ A  +  +
Sbjct: 1456 QLLEEMRNRNFSPDEAVTSMLL 1477


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 220/463 (47%), Gaps = 8/463 (1%)

Query: 81  GNPQAVFNALDLILKENLDR-LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALW 139
           GN   V NA+    + ++D+ L  +RD     C  E D   + AV++ LC+  + G    
Sbjct: 193 GNCNLVLNAI--CDQGSVDKALHLLRDLPSFGC--EPDVVSYNAVLKGLCMAKRWGCVQE 248

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L  +M++    P+++T N L++ LC+ G  E+   V+ +M+E   +P+   Y   I G C
Sbjct: 249 LMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGIC 308

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +   L  A  + + M + G++PN V +N L+  LC      +  + L E+    D     
Sbjct: 309 KEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF---DKDCPL 365

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           D +T  IL+D + +NG   + + L   M       D++ Y  +INGFC  G I  A    
Sbjct: 366 DDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLL 425

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M   G  P+ I+Y  +L  LC   +  +A      + + G   + I++ T+I  LC  
Sbjct: 426 KSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 485

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G + +A E L  ML     P+   ++ +IDG G+ G    A  + ++M++ G+S N   +
Sbjct: 486 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 545

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           +++  A +R G I     +   +    I  D   YN +I + C  G    A++    M+ 
Sbjct: 546 SSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVS 605

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            G  P+  TYT LI+G  + G +KEA+E+  ++ + G    H+
Sbjct: 606 SGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHL 648



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 199/456 (43%), Gaps = 6/456 (1%)

Query: 106 DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCK 165
           D  P R         HV ++   C GG   +A+ +   +  +G   DV   N ++N +C 
Sbjct: 146 DEMPRRGCAPIPPMYHV-ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICD 204

Query: 166 IGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
            G ++KA H++R++      P+  +YNA + G C          L   M      PN VT
Sbjct: 205 QGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVT 264

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLAD-DDGKATSDVITSTILMDSYFKNGDKFQALALW 284
            N L+  LC+ GL     + + EVLA   +   T D+     ++D   K G    A  + 
Sbjct: 265 FNTLISYLCRNGLF----ERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEIL 320

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           N M    ++ ++V YN L+ G C             +M  +    D +T+N L++  C+ 
Sbjct: 321 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 380

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
           G +D        +   G  PD I+Y T+I G C  G I +A   L SM      P    +
Sbjct: 381 GLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
            +++ G        +A  +   M+  G   N  TFN LI    + G +  A  L K+ML+
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
           +G  PD+ +Y+ +I      G    AL+L + M+ +G++P+ I Y+ +       G + +
Sbjct: 501 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 560

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
             ++F  IQ   +  D + +  +     +  E+++A
Sbjct: 561 VIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERA 596



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 164/359 (45%), Gaps = 6/359 (1%)

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YNA + GYCR  +L+ A  L + +    + PN  T+  +V ALC +G + DA+  L E+ 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEM- 148

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
               G A    +   IL ++  + G    A+ +  D+  +    D+   N+++N  C  G
Sbjct: 149 -PRRGCAPIPPMYHVIL-EAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQG 206

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A      +   G  PDV++YN +L  LC   +          + +    P+ +++ 
Sbjct: 207 SVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFN 266

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T+I  LC +G   +  E L  M E    P+  ++  IIDG  + G L  A  I + M S+
Sbjct: 267 TLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSY 326

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+  NV  +N L+          +   L  EM       D  T+N+L+   C  G +   
Sbjct: 327 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRV 386

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           ++L ++ML  G  PD+ITYT +I G C  G + EA  +   +   G   + I + I+ K
Sbjct: 387 IELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 445



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/443 (22%), Positives = 190/443 (42%), Gaps = 38/443 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  V+R LC  G+I  AL +  +M ++G  P    ++ ++   C+ G    A  V+ ++ 
Sbjct: 125 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 184

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               + +    N  +   C    +DKALHL   + + G  P+ V++N ++  LC     G
Sbjct: 185 ARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 244

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
              + + E                                      M +     +IV +N
Sbjct: 245 CVQELMEE--------------------------------------MVRMACPPNIVTFN 266

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+  C NG          QM + G  PD+  Y T+++ +CK+G L  A      +   
Sbjct: 267 TLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSY 326

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+ + Y T+++GLC      +  E L  M +K    +   +N+++D + + G +   
Sbjct: 327 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRV 386

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + ML  G   +V T+  +I    + G I +A  L K M   G  P+  +Y +++  
Sbjct: 387 IELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 446

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C+      A  L  +M+++G   + IT+  LI   C +G +++A E+  ++   G + D
Sbjct: 447 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 506

Query: 541 HIPFRILKKRYRRMKESDKARDI 563
            I +  +     +  ++D+A ++
Sbjct: 507 LISYSTVIDGLGKAGKTDEALEL 529


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 202/395 (51%), Gaps = 10/395 (2%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           C +  D   +  VI  LC   +   AL +  KM++ G  PDV+T + L+N  C+   +  
Sbjct: 98  CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD 157

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A  ++ +M EM   P+   YN  I G C++  ++ A+ LF  M  +G+R + VT+N LV 
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            LC  G   DA + + +++  D      +VIT T ++D + K G   +A+ L+ +M ++ 
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRD---IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           +  D+  YN LING C++G +  A      M+ +G LPDV+TYNTL+N  CK  ++DE +
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
             +  +++ G+  D I+Y TIIQG    G    A+E    M  +     P+I    I  Y
Sbjct: 335 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-----PNIRTYSILLY 389

Query: 412 GRCGD--LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G C +  +  A  + + M    +  ++ T+N +I    + G++ DA+ L + +   G+ P
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           DV +Y  +I   C       +  LY +M   G+ P
Sbjct: 450 DVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 199/419 (47%), Gaps = 41/419 (9%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G   D+ ++N ++N LC+      A  V+ +M +    P+  T ++ I G+C+ N +  A
Sbjct: 99  GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + L S M   G RP+ V +N ++   CK GL+ DAV+                       
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE----------------------- 195

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
                          L++ M +  ++ D V YN L+ G C +G  S A      M+ R  
Sbjct: 196 ---------------LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 240

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +P+VIT+  +++   K+GK  EA   Y  +++  V PD  +Y ++I GLC+HG + +A++
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 300

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L  M+ K  +P+   +N +I+G+ +   +     +   M   G+  +  T+N +I    
Sbjct: 301 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G    A  +   M      P++ TY++L+   C    +  AL L++ M +  I  DI 
Sbjct: 361 QAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           TY  +I G C  GN+++A ++F  +   GL  D + +  +   + R ++ DK+  +++K
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 476



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 169/399 (42%), Gaps = 73/399 (18%)

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           +LE+   +  +M + RP P+   ++  ++   +    D  + LF  M   GI  +  ++N
Sbjct: 49  NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           I+++ LC+      A+  +G+                                      M
Sbjct: 109 IVINCLCRCSRFVIALSVVGK--------------------------------------M 130

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            +   + D+V  + LINGFC    +  A     +M + GF PDV+ YNT+++  CK G +
Sbjct: 131 MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 190

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           ++A   +  + + GV  D ++Y +++ GLC  G    A   +  M+ + +VP        
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP-------- 242

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
                                      NV TF A+I    + G   +A  L +EM    +
Sbjct: 243 ---------------------------NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV 275

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PDVFTYN LI   C  G +  A Q+ D M+ +G  PD++TY  LI G C    + E  +
Sbjct: 276 DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK 335

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +F ++   GL  D I +  + + Y +    D A++I  +
Sbjct: 336 LFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 145/292 (49%), Gaps = 8/292 (2%)

Query: 286 DMFQKNIQT----DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
           D+F K IQ+     IV ++ +++    + +     + F  M   G   D+ +YN ++NCL
Sbjct: 55  DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           C+  +   A    G + K G  PD ++  ++I G C    +  A + +  M E    P+ 
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
            I+N IIDG  + G +++A  + D M   GV ++  T+N+L+      G   DA  L ++
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           M++  I P+V T+  +I      G    A++LY+EM RR + PD+ TY  LI G C  G 
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLL 569
           + EA+++   + T G   D + +  L   + + K  D+     R++ Q+ L+
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 123/254 (48%), Gaps = 42/254 (16%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           RC ++ D   + ++I  LC+ G++  A  +   M+ KG +PDV+T+N L+N  CK   ++
Sbjct: 273 RC-VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +   + REM++     +  TYN  I GY +    D A  +FS M +   RPN  T++IL+
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILL 388

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           + LC                                       N    +AL L+ +M + 
Sbjct: 389 YGLC--------------------------------------MNWRVEKALVLFENMQKS 410

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            I+ DI  YN++I+G C  G++  A+  F  +  +G  PDV++Y T+++  C++ + D++
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470

Query: 351 SHFYGVLSKTGVAP 364
              Y  + + G+ P
Sbjct: 471 DLLYRKMQEDGLLP 484


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 214/444 (48%), Gaps = 11/444 (2%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           M D G  RC    D   +  +I  L   G +  A     +M+ +   PD +T+N ++  L
Sbjct: 1   MADDG--RC--PPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAAL 56

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
            K   +++A  V+  M      PNC TYN+ + GYC   + +KA+ +F  M ++GI P+ 
Sbjct: 57  SKAQAMDRAMEVLTVMV----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDV 112

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           VT+N L+  LCK G   +A K    ++         D+ T   L+  Y   G   +   L
Sbjct: 113 VTYNSLMDYLCKNGKCTEARKIFDSMVKRG---LKPDITTYGTLLHGYASKGALVEMHDL 169

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
              M Q  +Q D   +N+LI  +     +      F +M ++G  P+ + Y T+++ LCK
Sbjct: 170 LALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCK 229

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G+LD+A   +  +   G+ P+ + Y ++I  LC +    KA E +  +L++ + P    
Sbjct: 230 LGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVF 289

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N I+D   + G +  +  + DL+   GV+ +V T++ LI      G +  A  L   M+
Sbjct: 290 FNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMV 349

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             G+ PD  TY+ LI   C +  +  AL L+ EM   G+ PDIITY  ++ G        
Sbjct: 350 SVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTA 409

Query: 524 EAEEVFAKIQTLGLAIDHIPFRIL 547
            A+E++A+I   G  ++   + I+
Sbjct: 410 AAKELYARITESGTQLELSTYNII 433



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 210/416 (50%), Gaps = 7/416 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PDV+++N +++ L K GD++KA     EM + R SP+  TYN+ I    +   +D+A+ +
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
            + M    + PN  T+N ++H  C  G    A+    ++ +D       DV+T   LMD 
Sbjct: 69  LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDG---IEPDVVTYNSLMDY 121

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             KNG   +A  +++ M ++ ++ DI  Y  L++G+   G +         M++ G   D
Sbjct: 122 LCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLD 181

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
              +N L+    KQ K+DE    +  + + G+ P+ ++Y+T+I GLC  G +  A     
Sbjct: 182 HHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFE 241

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M++K + P   ++  +I           A  +   +L  G++ N+  FN ++ +  + G
Sbjct: 242 QMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEG 301

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + ++  L   +   G+ PDV TY+ LI   C  G +  A++L   M+  G+ PD +TY+
Sbjct: 302 RVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYS 361

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            LI G+C    M++A  +F ++++ G+  D I + I+     R + +  A++++ +
Sbjct: 362 TLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYAR 417



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 166/374 (44%), Gaps = 66/374 (17%)

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI--------- 303
           DDG+   DV++   ++D  FK GD  +A   +++M  + +  D V YN +I         
Sbjct: 3   DDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAM 62

Query: 304 ----------------------NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
                                 +G+C +G    A   F +M   G  PDV+TYN+L++ L
Sbjct: 63  DRAMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYL 122

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK GK  EA   +  + K G+ PD  +Y T++ G    G +V+  + L  M++  +  + 
Sbjct: 123 CKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDH 182

Query: 402 HIWNV-----------------------------------IIDGYGRCGDLSNAFSIRDL 426
           H++N+                                   +IDG  + G L +A    + 
Sbjct: 183 HVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQ 242

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M+  G++ NV  + +LI A         A  L  E+L  GI P++  +N ++ + C  G 
Sbjct: 243 MIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGR 302

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  + +L+D +   G+ PD+ITY+ LI G+C  G M  A ++   + ++GL  D + +  
Sbjct: 303 VIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYST 362

Query: 547 LKKRYRRMKESDKA 560
           L   Y ++   + A
Sbjct: 363 LINGYCKINRMEDA 376



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 153/343 (44%), Gaps = 38/343 (11%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL---- 169
           +E D   + +++  LC  GK   A  +   M+++G  PD+ T+  L++     G L    
Sbjct: 108 IEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMH 167

Query: 170 ----------------------------EKADHVIREMSEMRP---SPNCATYNAFITGY 198
                                       EK D V+   S+MR    +PN   Y   I G 
Sbjct: 168 DLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGL 227

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           C++  LD A+  F  M + G+ PN V +  L+HALC       A + + E+L  D G   
Sbjct: 228 CKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEIL--DQGINP 285

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           + V  +TIL DS  K G   ++  L++ +    +  D++ Y+ LI+G+CL G +  A   
Sbjct: 286 NIVFFNTIL-DSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKL 344

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
              M+  G  PD +TY+TL+N  CK  ++++A   +  +   GV PD I+Y  I+ GL  
Sbjct: 345 LTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFR 404

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
                 A+E    + E     E   +N+I+  + +   L   F
Sbjct: 405 TRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHF 447



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 158/369 (42%), Gaps = 38/369 (10%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++   C  G+   A+ + RKM   G  PDV+T+N L++ LCK G   +A  +   M + 
Sbjct: 82  SIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKR 141

Query: 183 RPSPNCATY-----------------------------------NAFITGYCRVNELDKA 207
              P+  TY                                   N  I  Y +  ++D+ 
Sbjct: 142 GLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEV 201

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + +FS M   G+ PN V +  ++  LCK G L DA+    +++   D   T +V+  T L
Sbjct: 202 VLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI---DKGLTPNVVVYTSL 258

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           + +        +A  L  ++  + I  +IV +N +++  C  G +  +   F  +   G 
Sbjct: 259 IHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGV 318

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PDVITY+TL++  C  GK+D A      +   G+ PD ++Y T+I G C    +  A  
Sbjct: 319 NPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALA 378

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M    V P+   +N+I+ G  R    + A  +   +   G    + T+N +++   
Sbjct: 379 LFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFA 438

Query: 448 RGGSIFDAF 456
           +  S+   F
Sbjct: 439 KTNSLMMHF 447



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 98/199 (49%), Gaps = 3/199 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I  LC   K   A  L  +++ +G  P+++  N +++ LCK G + ++  +   + 
Sbjct: 255 YTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLG 314

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            +  +P+  TY+  I GYC   ++D A+ L + M + G++P+ VT++ L++  CK   + 
Sbjct: 315 HIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRME 374

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA+    E+   +      D+IT  I++   F+      A  L+  + +   Q ++  YN
Sbjct: 375 DALALFKEM---ESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYN 431

Query: 301 VLINGFCLNGDISSAFAYF 319
           +++  F     +   F  F
Sbjct: 432 IILMDFAKTNSLMMHFGCF 450



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +V ++N +I    + G +  A+    EML   + PD  TYN +I A      +  A+   
Sbjct: 10  DVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM--- 66

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
            E+L   + P+  TY  ++ G+C+ G  ++A  +F K+ + G+  D + +  L     + 
Sbjct: 67  -EVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKN 125

Query: 555 KESDKARDIHQKWLLR 570
            +  +AR I    + R
Sbjct: 126 GKCTEARKIFDSMVKR 141



 Score = 40.0 bits (92), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 47/107 (43%)

Query: 107 TGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI 166
           TG V   L+ D   +  +I   C   ++  AL L ++M   G  PD++T+N +++ L + 
Sbjct: 346 TGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRT 405

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
                A  +   ++E       +TYN  +  + + N L      F T
Sbjct: 406 RRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHFGCFRT 452


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 218/444 (49%), Gaps = 6/444 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR  C   +I  A+ L  +M   G  P ++T   L+ +LC++   +KA  +  +M +M+
Sbjct: 58  LIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMK 117

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   Y   I   C++N+LD A   F  M  +G  P++VT+ +LVH+L K        
Sbjct: 118 VKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGH 177

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+L+      + +++T   +++ Y K G   QAL+L   +           Y+ LI
Sbjct: 178 QIFEEMLSKGH---SPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLI 234

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C +     A   F   +  G + DVI Y + ++ LCK GKLDEA   +  + + G A
Sbjct: 235 DGLCKHDRHDEARELF--EMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCA 292

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +SY  II  LC    + +A+E +   +E+  +P   +  V++DG  +   +  A  I
Sbjct: 293 PDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVI 352

Query: 424 RDLMLSFG-VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
            + ML  G  + +V T++A+I    +   + DA+ + ++M   G  PDV TY  +I A C
Sbjct: 353 LERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFC 412

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            +G +  A +L+  M  RG   D++ Y  LI+G+C    + EA  +  ++   G+  + +
Sbjct: 413 KVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVV 472

Query: 543 PFRILKKRYRRMKESDKARDIHQK 566
               +     +    ++AR + +K
Sbjct: 473 SLSTIVDGLCKESRVEEARLLMEK 496



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 171/378 (45%), Gaps = 6/378 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  VI  LC   K+  A     +M+Q G +PD +T+  LV+ L K    E+   +  EM 
Sbjct: 125 YTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEML 184

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               SP   TY   + GYC+   +D+AL L   +   G  P+   ++ L+  LCK     
Sbjct: 185 SKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHD-RH 243

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           D  + L E+ A D      DVI  T  +    K G   +A A+   M +     D V+YN
Sbjct: 244 DEARELFEMAAGD----VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYN 299

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           V+I   C +  +S A     Q ++R  +P V     L++ LCK  +++EA      + +T
Sbjct: 300 VIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLET 359

Query: 361 G-VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
           G  AP  ++Y  +I GLC    +  A   L  M     VP+   +  IID + + G L  
Sbjct: 360 GDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDE 419

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +   M   G + +V  +N LI    R   + +A ++ +EM   GI P+V + + ++ 
Sbjct: 420 ARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVD 479

Query: 480 ASCNLGHIHLALQLYDEM 497
             C    +  A  L ++M
Sbjct: 480 GLCKESRVEEARLLMEKM 497



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 2/285 (0%)

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   L++ +  +G   +A  ++ D      + D   Y  LI GFC    I  A     +M
Sbjct: 19  TCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEM 78

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
              G  P ++T+ +L+  LC+    D+A   +  +    V PD   Y  +I  LC    +
Sbjct: 79  KAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKL 138

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A  +   M++   +P+   + V++    +         I + MLS G S  + T+  +
Sbjct: 139 DLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATV 198

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +    + G I  A SL + +   G  P    Y+ LI   C       A +L++  +  G 
Sbjct: 199 VNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE--MAAGD 256

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             D+I YT  I G C  G + EA+ V  K+   G A D + + ++
Sbjct: 257 VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVI 301



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 7/145 (4%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           L+R+    D  P   T       + AVI  LC   ++  A  + +KM + G VPDV+T+ 
Sbjct: 353 LERMLETGDRAPSVVT-------YSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYT 405

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            +++  CK+G L++A  + + M E   + +   YN  I GYCR  ++D+A+ +   MA  
Sbjct: 406 AIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGR 465

Query: 218 GIRPNRVTHNILVHALCKKGLLGDA 242
           GI+PN V+ + +V  LCK+  + +A
Sbjct: 466 GIQPNVVSLSTIVDGLCKESRVEEA 490



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 6/245 (2%)

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           + GF  +  T N+LL      G   EA   +     T   PD  +Y T+I+G C    I 
Sbjct: 10  RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIP 69

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A   L  M    + P    +  +I           A  I   M+   V  + F +  +I
Sbjct: 70  QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVI 129

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA---SCNLGHIHLALQLYDEMLRR 500
               +   +  A S  + M+  G  PD  TY +L+ +   +C     H   Q+++EML +
Sbjct: 130 GHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGH---QIFEEMLSK 186

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G +P+++TY  ++ G+C  G + +A  +  +++  G +     +  L     +    D+A
Sbjct: 187 GHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEA 246

Query: 561 RDIHQ 565
           R++ +
Sbjct: 247 RELFE 251



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 5/114 (4%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+ MR  G V      D   + A+I   C  G++  A  L ++M ++G   DV+ +N L+
Sbjct: 389 LQKMRRAGCV-----PDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILI 443

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
              C+   +++A  +I EM+     PN  + +  + G C+ + +++A  L   M
Sbjct: 444 RGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 213/424 (50%), Gaps = 3/424 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   CL  K+  AL    KM + G VPD +++N +++ L K   L++A  ++ +M    
Sbjct: 219 LIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKG 278

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SPN  TYN  + GYCR+  L +A  +   M  N + P   T+N+LV+  C  G + +A 
Sbjct: 279 LSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAF 338

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+   +      DV+T   L+D   +  D  +  +L  +M +K ++ + V YN+++
Sbjct: 339 RIRDEM---EKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIIL 395

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
              C  G+++ A     +M + G  PD +TYNTL+   CK GK+ +A      ++  G+ 
Sbjct: 396 KWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLK 455

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D  +  TI+  LC+   + +A   L S  ++  + +   + ++I GY +      A ++
Sbjct: 456 IDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNL 515

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M    +  +  T+N++I    +   +  A     EML +G+ PD  TYN++I   C 
Sbjct: 516 WDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCL 575

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G++  A Q ++EM+     PD+ T   L++G C  G +++A ++F  + + G  ID + 
Sbjct: 576 EGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVT 635

Query: 544 FRIL 547
           +  +
Sbjct: 636 YNTI 639



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 213/449 (47%), Gaps = 8/449 (1%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +L+E  D L  M+  G     L  +   +  ++   C  G +  A  +   M +   +P 
Sbjct: 263 LLQEARDLLLDMKSKG-----LSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPT 317

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V T+N LVN  C  G +++A  +  EM +M   P+  TYN  I G  +  +  +   L  
Sbjct: 318 VWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIE 377

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M   G++ N VT+NI++  +CKKG + +A   L ++   ++   + D +T   L+ +Y 
Sbjct: 378 EMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKM---EENGLSPDCVTYNTLIGAYC 434

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G   +A  + ++M  K ++ D    N +++  C+   +  A+   C   KRG++ D +
Sbjct: 435 KAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEV 494

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           +Y  L+    K  K D A + +  + +  + P  I+Y ++I GLC    + +A + L  M
Sbjct: 495 SYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEM 554

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           LE  +VP+   +N+II G+   G++  AF   + M+      +V+T N L+    R G +
Sbjct: 555 LENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGML 614

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             A  L   ++  G   DV TYN +I + C  G    A  L  EM  + + PD  TY  +
Sbjct: 615 EKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVI 674

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           I      G +KEAEE   K+   G+  D 
Sbjct: 675 IAALTDAGRIKEAEEFTLKMVESGIVHDQ 703



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 204/425 (48%), Gaps = 49/425 (11%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKI---GDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           KM +    P++LT N L+N L +      +  A  V+++  ++   PN  ++N  I GYC
Sbjct: 165 KMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYC 224

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
             +++  AL   + M+  G  P+ V++N ++ AL K+ LL +A     ++L D   K  S
Sbjct: 225 LESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEA----RDLLLDMKSKGLS 280

Query: 260 -DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            +  T  +L+  Y + G   +A  +   M + N+   +  YN+L+NGFC +G I  AF  
Sbjct: 281 PNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRI 340

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS---KTGVAPDQISYKTIIQG 375
             +M K   LPDV+TYNTL++  C Q +  ++S  Y ++    K GV  + ++Y  I++ 
Sbjct: 341 RDEMEKMNVLPDVVTYNTLIDG-CSQWR--DSSEVYSLIEEMDKKGVKCNAVTYNIILKW 397

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           +C  G++ +A   L  M E  + P+   +N +I  Y + G +  AF + D M S G+  +
Sbjct: 398 MCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKID 457

Query: 436 VFTFNA----------------LILAETRGGSIFD-------------------AFSLKK 460
            +T N                 L+ + ++ G I D                   A +L  
Sbjct: 458 TWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWD 517

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           EM    I P   TYN +IG  C    +  A+   +EML  G+ PD  TY  +I G C  G
Sbjct: 518 EMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEG 577

Query: 521 NMKEA 525
           N+++A
Sbjct: 578 NVEKA 582



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 191/403 (47%), Gaps = 26/403 (6%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L  +M +KG   + +T+N ++  +CK G++ +A   + +M E   SP+C TYN  I  YC
Sbjct: 375 LIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYC 434

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +  ++ KA  +   M + G++ +  T N ++H LC +  L +A   L    A   G    
Sbjct: 435 KAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCS--ASKRGYIL- 491

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           D ++  IL+  YFK+    +AL LW++M ++ I    + YN +I G C +  +  A    
Sbjct: 492 DEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKL 551

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +ML+ G +PD  TYN +++  C +G +++A  F+  + +    PD  +   +++GLC  
Sbjct: 552 NEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCRE 611

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G + KA +   +++ K    +   +N II    + G   NA+ +   M +  +  + +T+
Sbjct: 612 GMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTY 671

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPD----------VFT-------------YNL 476
             +I A T  G I +A     +M+  GI  D          V T             Y+ 
Sbjct: 672 KVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSD 731

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            I   CN      A+ L+ E+ + G+  +  TY  L++G   R
Sbjct: 732 QINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKR 774



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 173/357 (48%), Gaps = 35/357 (9%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P P+    +  I  Y ++++   A  +F+ M     RPN +T N L+++L         V
Sbjct: 136 PEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSL---------V 186

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           ++                 +S+IL+           A  +  D  +  +  +  ++N+LI
Sbjct: 187 RYPS---------------SSSILL-----------ARQVLKDSIKLGVVPNTNSFNILI 220

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G+CL   +  A  +  +M + G +PD ++YNT+L+ L K+  L EA      +   G++
Sbjct: 221 YGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLS 280

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P++ +Y  ++ G C  G + +A + +  M   +++P    +N++++G+   G +  AF I
Sbjct: 281 PNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRI 340

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
           RD M    V  +V T+N LI   ++     + +SL +EM   G+  +  TYN+++   C 
Sbjct: 341 RDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCK 400

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            G++  A    D+M   G++PD +TY  LI  +C  G M +A  +  ++ + GL ID
Sbjct: 401 KGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKID 457



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 26/263 (9%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL L  +M ++  +P  +T+N ++  LC+   +++A   + EM E    P+  TYN  I 
Sbjct: 512 ALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIH 571

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G+C    ++KA    + M  N  +P+  T NIL+  LC++G+L  A+K    +++   GK
Sbjct: 572 GFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSK--GK 629

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              DV+T   ++ S  K G    A  L  +M  K +  D   Y V+I      G I  A 
Sbjct: 630 DI-DVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAE 688

Query: 317 AYFCQMLKRGFLPD-----------------------VITYNTLLNCLCKQGKLDEASHF 353
            +  +M++ G + D                        I Y+  +N LC Q K  +A H 
Sbjct: 689 EFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHL 748

Query: 354 YGVLSKTGVAPDQISYKTIIQGL 376
           +  ++K GVA ++ +Y  +++GL
Sbjct: 749 FVEVTKEGVALNKYTYLNLMEGL 771



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 20/244 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +VI  LC   K+  A+    +M++ G VPD  T+N +++  C  G++EKA     EM E 
Sbjct: 533 SVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIEN 592

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  T N  + G CR   L+KAL LF+T+ + G   + VT+N ++ +LCK+G   +A
Sbjct: 593 LFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENA 652

Query: 243 VKFLGEVLADDDG--KATSDVITSTILMDSYFKNGDKFQALALWNDMFQ---------KN 291
              L E+ A   G  + T  VI + +      K  ++F    + + +           +N
Sbjct: 653 YDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQN 712

Query: 292 IQTDIV---------AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           + T  V         AY+  IN  C       A   F ++ K G   +  TY  L+  L 
Sbjct: 713 VLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLI 772

Query: 343 KQGK 346
           K+ K
Sbjct: 773 KRRK 776


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 225/460 (48%), Gaps = 18/460 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  V+  LC   K+  A+   R    K   P V++ N +++  CK+G ++ A      + 
Sbjct: 209 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVL 268

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    P+  ++N  I G C V  + +AL L S M  +G+ P+ VT+NILV      G++ 
Sbjct: 269 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMIS 328

Query: 241 DAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ-TDIVA 298
            A    GEV+ D   K  S DVIT TIL+    + G+    L L  DM  +  +   I+ 
Sbjct: 329 GA----GEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIP 384

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y+V+++G C  G +  A + F  +   G  PD++ Y+ +++ LCK GK D A   Y  + 
Sbjct: 385 YSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMC 444

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
              + P+  +   I+ GLC  G +++AR  L S++      +  ++N++IDGY + G + 
Sbjct: 445 YKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIE 504

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +  + +  G++ NV TFN+LI    +  +I +A  +   + L G+ P V +Y  L+
Sbjct: 505 EALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLM 564

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK------- 531
            A  N G I    +L  EM   GI P  +TY+ + KG C    ++   +V  +       
Sbjct: 565 DAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFN 624

Query: 532 -----IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
                +++ G+  D I +  + +   R+K   +A ++ +K
Sbjct: 625 HVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKK 664



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 218/460 (47%), Gaps = 21/460 (4%)

Query: 100 RLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYL 159
           R    +D GP   +  +       ++   C  G +  A      +++ G VP V +HN L
Sbjct: 230 RTSEWKDIGPSVVSFNS-------IMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNIL 282

Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
           +N LC +G + +A  +  +M++    P+  TYN  + G+  +  +  A  +   M + G+
Sbjct: 283 INGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGL 342

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            P+ +T+ IL+   C+ G +   +  L ++L+   G     +I  ++++    K G   +
Sbjct: 343 SPDVITYTILLCGQCQLGNIDMGLILLKDMLS--RGFELKSIIPYSVMLSGLCKTGRVDE 400

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           AL+L+ D+    +  D+VAY+++I+G C  G    A   + +M  +  LP+  T   ++ 
Sbjct: 401 ALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIML 460

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LC++G L EA      L  +G   D I Y  +I G    G I +A E     +E  + P
Sbjct: 461 GLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITP 520

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +N +I GY +  +++ A  I D++  +G+  +V ++  L+ A    GSI     L+
Sbjct: 521 NVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELR 580

Query: 460 KEMLLDGIFPDVFTYNLLIGA--------SCNLGHIHLALQLYDEMLR----RGITPDII 507
           +EM  +GI P   TY+++           +CN       L+ ++ +LR     GITPD I
Sbjct: 581 REMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQI 640

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           TY  +I+  C   ++  A E+F K+++  L      + IL
Sbjct: 641 TYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNIL 680



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 213/455 (46%), Gaps = 16/455 (3%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++C L      H  +I  LCL G I  AL L   M + G  PD +T+N LV     +G +
Sbjct: 268 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMI 327

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR-PNRVTHNI 228
             A  VI++M +   SP+  TY   + G C++  +D  L L   M + G    + + +++
Sbjct: 328 SGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSV 387

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++  LCK G + +A+    ++ A      T D++  +I++    K G    A+ ++++M 
Sbjct: 388 MLSGLCKTGRVDEALSLFYDLEAYG---LTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMC 444

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            K I  +      ++ G C  G +  A +    ++  G   D+I YN +++   K G ++
Sbjct: 445 YKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIE 504

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA   + V  ++G+ P+  ++ ++I G C   +I +AR+ L  +    +VP    +  ++
Sbjct: 505 EALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLM 564

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL---- 464
           D Y  CG + +   +R  M + G+     T++ +     RG  + +   + +E +L    
Sbjct: 565 DAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFN 624

Query: 465 --------DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
                   +GI PD  TYN +I   C + H+  A +L+ +M  + + P   TY  LI   
Sbjct: 625 HVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSL 684

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           C  G +++A+     +Q   +++    +  + K +
Sbjct: 685 CIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAH 719



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 197/429 (45%), Gaps = 24/429 (5%)

Query: 129 CLGGKIGTALWLRRKMIQKG-TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           C  G I   L L + M+ +G  +  ++ ++ +++ LCK G +++A  +  ++     +P+
Sbjct: 357 CQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPD 416

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
              Y+  I G C++ + D A+ ++  M    I PN  T   ++  LC+KG+L +A   L 
Sbjct: 417 LVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLD 476

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
            +++  D   T D+I   I++D Y K+G   +AL L+    +  I  ++  +N LI G+C
Sbjct: 477 SLISSGD---TLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYC 533

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
              +I+ A      +   G +P V++Y TL++     G +         +   G+ P  +
Sbjct: 534 KTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNV 593

Query: 368 SYKTIIQGLCIH------GDIVKAR------EFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
           +Y  I +GLC          +++ R        L  M  + + P+   +N II    R  
Sbjct: 594 TYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVK 653

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA----FSLKKEMLLDGIFPDV 471
            LS AF +   M S  +     T+N LI +    G I  A    +SL+K      +    
Sbjct: 654 HLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKR----NVSLSK 709

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
           F Y  +I A C  G   +A+ L++++L RG    I  Y+ +I   C R    E++  F  
Sbjct: 710 FAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCL 769

Query: 532 IQTLGLAID 540
           + + G++ D
Sbjct: 770 MLSRGISPD 778



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 208/479 (43%), Gaps = 86/479 (17%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           RK    G V D+L   +L + L  +   +++ +++++M +   + +  +YN+ +  +   
Sbjct: 137 RKWESTGLVWDMLL--FLSSRLRMV---DESLYILKKMKDRNLNVSTQSYNSVLYNF--- 188

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            E DK   ++  + +     N  T++ +V  LC++  L DAV FL      D G +   V
Sbjct: 189 RETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPS---V 241

Query: 262 ITSTILMDSYFK-----------------------------------NGDKFQALALWND 286
           ++   +M SY K                                    G   +AL L +D
Sbjct: 242 VSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASD 301

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL--NC---- 340
           M +  ++ D V YN+L+ GF L G IS A      ML +G  PDVITY  LL   C    
Sbjct: 302 MNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGN 361

Query: 341 ------------------------------LCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
                                         LCK G++DEA   +  L   G+ PD ++Y 
Sbjct: 362 IDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYS 421

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +I GLC  G    A      M  K ++P       I+ G  + G L  A S+ D ++S 
Sbjct: 422 IVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISS 481

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G + ++  +N +I    + G I +A  L K  +  GI P+V T+N LI   C   +I  A
Sbjct: 482 GDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEA 541

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
            ++ D +   G+ P +++YT L+  +   G++K  EE+  +++  G+   ++ + ++ K
Sbjct: 542 RKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFK 600



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 176/432 (40%), Gaps = 60/432 (13%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++  LC  G++  AL L   +   G  PD++ ++ +++ LCK+G  + A  V  EM 
Sbjct: 385 YSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMC 444

Query: 181 EMRPSPNCAT-----------------------------------YNAFITGYCRVNELD 205
             R  PN  T                                   YN  I GY +   ++
Sbjct: 445 YKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIE 504

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +AL LF     +GI PN  T N L++  CK   + +A K L  +           V++ T
Sbjct: 505 EALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYG---LVPSVVSYT 561

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC-----------LNGDISS 314
            LMD+Y   G       L  +M  + I    V Y+V+  G C           L   I  
Sbjct: 562 TLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILE 621

Query: 315 AFAYFCQ-MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            F +  + M   G  PD ITYNT++  LC+   L  A   +  +    + P   +Y  +I
Sbjct: 622 KFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILI 681

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
             LCI+G I KA  FL S+ +++V      +  +I  +   GD   A  + + +L  G +
Sbjct: 682 DSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFN 741

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            ++  ++A+I    R     ++      ML  GI PD+    ++I +           +L
Sbjct: 742 VSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDLDICEVMIKSD----------EL 791

Query: 494 YDEMLRRGITPD 505
               ++ G+ PD
Sbjct: 792 LSWTIKWGLLPD 803



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 121/235 (51%), Gaps = 1/235 (0%)

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TY+T+++ LC+Q KL++A  F        + P  +S+ +I+   C  G +  A+ F  ++
Sbjct: 208 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTV 267

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           L+  +VP  +  N++I+G    G ++ A  +   M   GV  +  T+N L+      G I
Sbjct: 268 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMI 327

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT-PDIITYTE 511
             A  + ++ML  G+ PDV TY +L+   C LG+I + L L  +ML RG     II Y+ 
Sbjct: 328 SGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSV 387

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           ++ G C  G + EA  +F  ++  GL  D + + I+     ++ + D A  ++ +
Sbjct: 388 MLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDE 442



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 64/134 (47%)

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           N  T++ ++    R   + DA    +      I P V ++N ++ + C LG + +A   +
Sbjct: 205 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFF 264

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
             +L+ G+ P + ++  LI G C  G++ EA E+ + +   G+  D + + IL K +  +
Sbjct: 265 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLL 324

Query: 555 KESDKARDIHQKWL 568
                A ++ Q  L
Sbjct: 325 GMISGAGEVIQDML 338


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 202/406 (49%), Gaps = 4/406 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G    +L L   M++KG  PDV+    L+     + ++ KA  V+ E+ E    P+ 
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDV 154

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             YNA I G+C++N +D A  +   M +    P+ VT+NI++ +LC +G L  A+K L +
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +L+D+       VIT TIL+++    G   +AL L ++M  + ++ D+  YN +I G C 
Sbjct: 215 LLSDN---CQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G +  AF     +  +G  PDVI+YN LL  L  QGK +E       +      P+ ++
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I  LC  G I +A   L  M EK + P+ + ++ +I  + R G L  A    + M+
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           S G   ++  +N ++    + G    A  +  ++   G  P+  +YN +  A  + G   
Sbjct: 392 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 451

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
            AL +  EM+  GI PD ITY  +I   C  G + +A E+   +++
Sbjct: 452 RALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRS 497



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 200/437 (45%), Gaps = 4/437 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   + A+I   C   +I  A  +  +M  K   PD +T+N ++  LC  G L+ A  
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+ ++      P   TY   I        +D+AL L   M + G++P+  T+N ++  +C
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G++  A + +  +   +      DVI+  IL+ +    G   +   L   MF +    
Sbjct: 271 KEGMVDRAFEMIRNL---ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 327

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++V Y++LI   C +G I  A      M ++G  PD  +Y+ L+   C++G+LD A  F 
Sbjct: 328 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 387

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G  PD ++Y T++  LC +G   +A E    + E    P    +N +       
Sbjct: 388 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 447

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           GD   A  +   M+S G+  +  T+N++I    R G +  AF L  +M      P V TY
Sbjct: 448 GDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTY 507

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N+++   C    I  A+ + D M+  G  P+  TYT LI+G    G   EA E+   +  
Sbjct: 508 NIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 567

Query: 535 LGLAIDHIPFRILKKRY 551
           +  AI    F+ L + +
Sbjct: 568 IN-AISEYSFKRLHRTF 583



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 184/400 (46%), Gaps = 4/400 (1%)

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           C+ G+  ++ H++  M     +P+       I G+  +  + KA+ +   +   G +P+ 
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
             +N L++  CK   + DA + L  + + D    + D +T  I++ S    G    AL +
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKD---FSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            + +   N Q  ++ Y +LI    L G +  A     +ML RG  PD+ TYNT++  +CK
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
           +G +D A      L   G  PD ISY  +++ L   G   +  + +  M  +   P    
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           ++++I    R G +  A ++  LM   G++ + ++++ LI A  R G +  A    + M+
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
            DG  PD+  YN ++   C  G    AL+++ ++   G +P+  +Y  +     + G+  
Sbjct: 392 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 451

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            A  +  ++ + G+  D I +  +     R    DKA ++
Sbjct: 452 RALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFEL 491



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 156/310 (50%), Gaps = 3/310 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  +IR +C  G +  A  + R +  KG  PDV+++N L+  L   G  E+ +
Sbjct: 255 LKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGE 314

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M   +  PN  TY+  IT  CR  ++++A++L   M   G+ P+  +++ L+ A 
Sbjct: 315 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 374

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C++G L  A++FL  +++D       D++    ++ +  KNG   QAL ++  + +    
Sbjct: 375 CREGRLDVAIEFLETMISDG---CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 431

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +  +YN + +    +GD   A     +M+  G  PD ITYN++++CLC++G +D+A   
Sbjct: 432 PNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFEL 491

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +      P  ++Y  ++ G C    I  A + L SM+     P    + V+I+G G 
Sbjct: 492 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGF 551

Query: 414 CGDLSNAFSI 423
            G  + A  +
Sbjct: 552 AGYRAEAMEL 561



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 163/366 (44%), Gaps = 6/366 (1%)

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           CR     ++LHL  TM   G  P+ +    L+        +  AV+ + E+L   +    
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EIL---EKFGQ 151

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            DV     L++ + K      A  + + M  K+   D V YN++I   C  G +  A   
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             Q+L     P VITY  L+     +G +DEA      +   G+ PD  +Y TII+G+C 
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G + +A E + ++  K   P+   +N+++      G       +   M S     NV T
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           ++ LI    R G I +A +L K M   G+ PD ++Y+ LI A C  G + +A++  + M+
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             G  PDI+ Y  ++   C  G   +A E+F K+  +G + +   +  +          D
Sbjct: 392 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL--WSSGD 449

Query: 559 KARDIH 564
           K R +H
Sbjct: 450 KIRALH 455


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 202/395 (51%), Gaps = 10/395 (2%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           C +  D   +  VI  LC   +   AL +  KM++ G  PDV+T + L+N  C+   +  
Sbjct: 39  CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD 98

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A  ++ +M EM   P+   YN  I G C++  ++ A+ LF  M  +G+R + VT+N LV 
Sbjct: 99  AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 158

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            LC  G   DA + + +++  D      +VIT T ++D + K G   +A+ L+ +M ++ 
Sbjct: 159 GLCCSGRWSDAARLMRDMVMRD---IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 215

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           +  D+  YN LING C++G +  A      M+ +G LPDV+TYNTL+N  CK  ++DE +
Sbjct: 216 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 275

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
             +  +++ G+  D I+Y TIIQG    G    A+E    M  +     P+I    I  Y
Sbjct: 276 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-----PNIRTYSILLY 330

Query: 412 GRCGD--LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G C +  +  A  + + M    +  ++ T+N +I    + G++ DA+ L + +   G+ P
Sbjct: 331 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 390

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           DV +Y  +I   C       +  LY +M   G+ P
Sbjct: 391 DVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 199/419 (47%), Gaps = 41/419 (9%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G   D+ ++N ++N LC+      A  V+ +M +    P+  T ++ I G+C+ N +  A
Sbjct: 40  GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 99

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + L S M   G RP+ V +N ++   CK GL+ DAV+                       
Sbjct: 100 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE----------------------- 136

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
                          L++ M +  ++ D V YN L+ G C +G  S A      M+ R  
Sbjct: 137 ---------------LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 181

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +P+VIT+  +++   K+GK  EA   Y  +++  V PD  +Y ++I GLC+HG + +A++
Sbjct: 182 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 241

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L  M+ K  +P+   +N +I+G+ +   +     +   M   G+  +  T+N +I    
Sbjct: 242 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 301

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G    A  +   M      P++ TY++L+   C    +  AL L++ M +  I  DI 
Sbjct: 302 QAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 358

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           TY  +I G C  GN+++A ++F  +   GL  D + +  +   + R ++ DK+  +++K
Sbjct: 359 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 417



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 165/388 (42%), Gaps = 73/388 (18%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M + RP P+   ++  ++   +    D  + LF  M   GI  +  ++NI+++ LC+   
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCR--- 57

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
                +F+                                 AL++   M +   + D+V 
Sbjct: 58  ---CSRFV--------------------------------IALSVVGKMMKFGYEPDVVT 82

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
            + LINGFC    +  A     +M + GF PDV+ YNT+++  CK G +++A   +  + 
Sbjct: 83  VSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRME 142

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           + GV  D ++Y +++ GLC  G    A   +  M+ + +VP                   
Sbjct: 143 RDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP------------------- 183

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
                           NV TF A+I    + G   +A  L +EM    + PDVFTYN LI
Sbjct: 184 ----------------NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 227

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G +  A Q+ D M+ +G  PD++TY  LI G C    + E  ++F ++   GL 
Sbjct: 228 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 287

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQK 566
            D I +  + + Y +    D A++I  +
Sbjct: 288 GDTITYNTIIQGYFQAGRPDAAQEIFSR 315



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 140/287 (48%), Gaps = 4/287 (1%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M Q      IV ++ +++    + +     + F  M   G   D+ +YN ++NCLC+  +
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
              A    G + K G  PD ++  ++I G C    +  A + +  M E    P+  I+N 
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           IIDG  + G +++A  + D M   GV ++  T+N+L+      G   DA  L ++M++  
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           I P+V T+  +I      G    A++LY+EM RR + PD+ TY  LI G C  G + EA+
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLL 569
           ++   + T G   D + +  L   + + K  D+     R++ Q+ L+
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 287



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 123/254 (48%), Gaps = 42/254 (16%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           RC ++ D   + ++I  LC+ G++  A  +   M+ KG +PDV+T+N L+N  CK   ++
Sbjct: 214 RC-VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 272

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +   + REM++     +  TYN  I GY +    D A  +FS M +   RPN  T++IL+
Sbjct: 273 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILL 329

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           + LC                                       N    +AL L+ +M + 
Sbjct: 330 YGLC--------------------------------------MNWRVEKALVLFENMQKS 351

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            I+ DI  YN++I+G C  G++  A+  F  +  +G  PDV++Y T+++  C++ + D++
Sbjct: 352 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 411

Query: 351 SHFYGVLSKTGVAP 364
              Y  + + G+ P
Sbjct: 412 DLLYRKMQEDGLLP 425


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 135/517 (26%), Positives = 233/517 (45%), Gaps = 51/517 (9%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L +  + L  MRD G     +      H  VIR LC  G+ G AL   + +      PD+
Sbjct: 46  LDQAYELLDEMRDRG-----IPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDI 100

Query: 154 LTHNYLV------------------------------------NELCKIGDLEKADHVIR 177
           +T N LV                                    N LCK G L++A  ++ 
Sbjct: 101 ITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLD 160

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
            M+E    PN  TY+  + G C+    DK   L   M   G +P+ + +N L++ LCK  
Sbjct: 161 LMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSR 220

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            L +A++ +  ++          V+T   LM+ + ++    +A  L   M ++    D++
Sbjct: 221 RLDEALELVQLMIRSG---CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVI 277

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK------QGKLDEAS 351
            YN +I G C +  +  A A   QM+    +PDVITY+T+++ LCK        KL+ A 
Sbjct: 278 NYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAAC 337

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
               ++ +TG  P+  +Y  +I+GLC      +A   L  M++  VVP+   ++++I   
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSL 397

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +  DL  A+ I  +M       N   + ALI   ++GG +  A  +  E++++   P V
Sbjct: 398 CKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV-FELMVESFRPGV 456

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TYN ++   C +G I  A+++ + M+ +   PD  +Y  LI+G C    ++EA E+F  
Sbjct: 457 ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQA 516

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           ++  G A++   + +L     + K    A  +  K +
Sbjct: 517 VEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLI 553



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 203/416 (48%), Gaps = 14/416 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC  GK+  A  L  +M  +G  P V  HN ++  LCK G    A    + ++  
Sbjct: 35  SLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGT 94

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTM-ANNGIRPNRVTHNILVHALCKKGLLGD 241
           + +P+  T+N  +    +   +++A  +F +M  ++   PN VT+  +++ LCK G L  
Sbjct: 95  KCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDR 154

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A++ L   L ++ G    +VIT ++L++   K G   +   L  +M ++  Q D++ YN 
Sbjct: 155 AIELLD--LMNETG-CCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L+NG C +  +  A      M++ G  P V+TYN+L+   C+  ++D A     V+S+ G
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD----- 416
             PD I+Y T+I GLC    +  A+  L  M+    VP+   ++ IIDG   C D     
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL--CKDWRVDA 329

Query: 417 ---LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              L  A  I ++M   G   N  T+  +I    R      A +L + M+   + PD+ +
Sbjct: 330 DWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSS 389

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           ++++IG+ C    +  A +++  M  R   P+ + Y  LI G    G + +A  VF
Sbjct: 390 FSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 183/411 (44%), Gaps = 48/411 (11%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N  +N L + G   +A  + RE    R  PN  TY + I G C+  +LD+A  L   M +
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREE---RCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            GI P    HN ++  LCK G  GDA+ +   V      K T D+IT             
Sbjct: 59  RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGT---KCTPDIIT------------- 102

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM-LKRGFLPDVITYN 335
                                 +N+L++    +G +  AF  F  M      LP+V+TY 
Sbjct: 103 ----------------------FNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYT 140

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           T++N LCK GKLD A     ++++TG  P+ I+Y  +++GLC  G   K    L  M  +
Sbjct: 141 TVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR 200

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
              P+  ++N +++G  +   L  A  +  LM+  G    V T+N+L+    R   +  A
Sbjct: 201 GFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRA 260

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           F L + M   G  PDV  YN +I   C    +  A  L  +M+     PD+ITY+ +I G
Sbjct: 261 FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320

Query: 516 HC------ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            C      A   ++ A E+   ++  G   +   + ++ +   R ++S +A
Sbjct: 321 LCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQA 371



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 15/240 (6%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D  L+   + L+ M+ TG        +   +  VI  LC   K   AL L R+MI    V
Sbjct: 330 DWKLEAACEILEMMKQTG-----CPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVV 384

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD+ + + ++  LCK  DL+ A  +   MSE    PN   Y A I G  +  E+DKA+ +
Sbjct: 385 PDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV 444

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD---DGKATSDVITSTIL 267
           F  M  +  RP   T+N ++  LC  G + +AV+ +  ++  +   DG +   +I     
Sbjct: 445 FELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCR 503

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +    +  + FQA+        K    ++  YNVL+N  C    +S A     ++++ G+
Sbjct: 504 VSCVEEAYELFQAVE------AKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 1/179 (0%)

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           E+  VP    +  +I G  + G L  A+ + D M   G+   V   N +I    + G   
Sbjct: 23  EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFG 82

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM-LRRGITPDIITYTEL 512
           DA    K +      PD+ T+N+L+ A    G +  A Q+++ M       P+++TYT +
Sbjct: 83  DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTV 142

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           I G C  G +  A E+   +   G   + I + +L +   +   +DK   + Q+   R 
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 219/449 (48%), Gaps = 3/449 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +++ +C  GK+  AL L  KM + G   D+L + YL+N L K     +A  + R M   
Sbjct: 14  TLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSE 73

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             S N  TY   I   C+     K L +F  M N GI PN + ++ L++ LC+ G L +A
Sbjct: 74  ICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREA 133

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V    E+++       ++VIT   L+ +  + G   +A   ++ M  + I  D+V +  L
Sbjct: 134 VNLFDEMVSQG---IKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTL 190

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+     G +  A+  F  M+K+G  P+++TYN+LLN LC   ++D A   + V+ + G+
Sbjct: 191 IDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGI 250

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D ISY T+I G C  G   +A      M  + + P    + +++    + G +  A  
Sbjct: 251 KIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKE 310

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M   G S ++ T+  L+    + G I +A  + + +      P +  Y++LIG   
Sbjct: 311 LFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMF 370

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
                  A++++DE+   G+ P+I+TY  +I G C  G + EAE +F +++  G   D I
Sbjct: 371 QARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEI 430

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLRN 571
            F  + + + +  +  KA +  ++   +N
Sbjct: 431 SFNFIIRGFLQENQVQKAMEFLKRMREKN 459



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 181/382 (47%), Gaps = 3/382 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC  G     L + R+MI  G  P+V+ ++ L+N LC++G L +A ++  EM    
Sbjct: 85  VIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQG 144

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  TYN+ I   CR     +A   FS M   GI P+ VT   L+  L KKG + +A 
Sbjct: 145 IKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAY 204

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K     L    G+A  +++T   L++    +     A+ L+  M ++ I+ D+++YN LI
Sbjct: 205 KIFE--LMIKQGEA-PNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLI 261

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG+C +G    A   F +M      P + TY  LL  L + G++  A   +  +   G +
Sbjct: 262 NGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQS 321

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P   +Y  ++ GLC +G I +A +   S+      P   I++++I G  +     +A  I
Sbjct: 322 PSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEI 381

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D + + G+  N+ T+N +I    + G + +A  L  +M   G   D  ++N +I     
Sbjct: 382 FDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQ 441

Query: 484 LGHIHLALQLYDEMLRRGITPD 505
              +  A++    M  +  +P+
Sbjct: 442 ENQVQKAMEFLKRMREKNFSPN 463



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 181/351 (51%), Gaps = 3/351 (0%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            PN  T +  + G C   ++  AL LF  M  +G + + + +  L++AL K      AV+
Sbjct: 6   QPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVE 65

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
               +L++     + +  T  +++DS  K+G   + L ++ +M    I  +++ Y+ LIN
Sbjct: 66  LHRRMLSEI---CSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLIN 122

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G +  A   F +M+ +G   +VITYN+L++  C+ G   EA+  +  +   G+ P
Sbjct: 123 GLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILP 182

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D +++ T+I  L   G + +A +    M+++   P    +N +++G      + +A  + 
Sbjct: 183 DVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLF 242

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           ++M+  G+  +V ++N LI      G   +A +L ++M  + + P + TY +L+ A    
Sbjct: 243 EVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQN 302

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           G I  A +L++ M   G +P + TYT L+ G C  G ++EA +VF  ++++
Sbjct: 303 GRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSI 353



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 158/320 (49%), Gaps = 3/320 (0%)

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
           +G +PN VT + LV  +C +G + DA++   ++          D++    L+++  K   
Sbjct: 3   SGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSG---FQGDILLYGYLINALRKTRQ 59

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A+ L   M  +    +   Y ++I+  C +G        F +M+  G  P+VI Y++
Sbjct: 60  ARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSS 119

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L+N LC+ GKL EA + +  +   G+  + I+Y ++I   C  G   +A      M+ + 
Sbjct: 120 LINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEG 179

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           ++P+   +  +ID   + G +  A+ I +LM+  G + N+ T+N+L+        +  A 
Sbjct: 180 ILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAV 239

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L + M+  GI  DV +YN LI   C  G    A+ L+ +M    +TP I TYT L+K  
Sbjct: 240 RLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKAL 299

Query: 517 CARGNMKEAEEVFAKIQTLG 536
              G ++ A+E+F  +Q  G
Sbjct: 300 YQNGRIRTAKELFNNMQICG 319



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 136/274 (49%)

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           Q ++V  + L+ G C  G +  A   F +M + GF  D++ Y  L+N L K  +   A  
Sbjct: 6   QPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVE 65

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            +  +     + +  +Y  +I  LC  G  +K  +    M+   + P   +++ +I+G  
Sbjct: 66  LHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLC 125

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           R G L  A ++ D M+S G+ +NV T+N+LI A  R G   +A     +M+ +GI PDV 
Sbjct: 126 RVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVV 185

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           T+  LI      G +  A ++++ M+++G  P+I+TY  L+ G C    M  A  +F  +
Sbjct: 186 TFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVM 245

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
              G+ ID I +  L   Y    ++++A  + +K
Sbjct: 246 VERGIKIDVISYNTLINGYCTSGKTEEAMTLFRK 279



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 118/243 (48%), Gaps = 3/243 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  LCL  ++  A+ L   M+++G   DV+++N L+N  C  G  E+A  + R+M   
Sbjct: 224 SLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYE 283

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  TY   +    +   +  A  LF+ M   G  P+  T+ +L+  LCK G + +A
Sbjct: 284 ELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEA 343

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +     +      K    +   +IL+   F+      A+ +++++    +  +IV YN++
Sbjct: 344 IDVFRSL---KSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIM 400

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING C  G +  A   F QM + G   D I++N ++    ++ ++ +A  F   + +   
Sbjct: 401 INGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNF 460

Query: 363 APD 365
           +P+
Sbjct: 461 SPN 463



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 93/189 (49%)

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           K+G  P+ ++  T+++G+C  G ++ A E    M       +  ++  +I+   +     
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   MLS   S N FT+  +I +  + G       + +EM+  GI P+V  Y+ LI
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C +G +  A+ L+DEM+ +GI  ++ITY  LI   C  G  KEA   F+++   G+ 
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 539 IDHIPFRIL 547
            D + F  L
Sbjct: 182 PDVVTFTTL 190



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 101/217 (46%), Gaps = 11/217 (5%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +++ L   G+I TA  L   M   G  P + T+  L++ LCK G +E+A  V R + 
Sbjct: 292 YTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLK 351

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            ++  P+   Y+  I G  +    + A+ +F  +   G+ PN VT+NI+++ LCK+G L 
Sbjct: 352 SIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLL 411

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +   ++   ++     D I+   ++  + +     +A+     M +KN   +     
Sbjct: 412 EAERLFVQM---EESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTL 468

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
           +L+N +  +   S         L   FL +++   TL
Sbjct: 469 MLVNLYAADAQSSE--------LPNNFLHELVQKKTL 497



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/217 (21%), Positives = 99/217 (45%), Gaps = 3/217 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I   C  GK   A+ L RKM  +   P + T+  L+  L + G +  A 
Sbjct: 250 IKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAK 309

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M     SP+  TY   + G C+   +++A+ +F ++ +   +P+   ++IL+  +
Sbjct: 310 ELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGM 369

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            +      A++   E+          +++T  I+++   K G   +A  L+  M +   +
Sbjct: 370 FQARRWESAMEIFDEI---PTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCE 426

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
            D +++N +I GF     +  A  +  +M ++ F P+
Sbjct: 427 QDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPN 463



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 41/71 (57%)

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
           ++ G  P+++T + L+KG C  G + +A E+F K+   G   D + +  L    R+ +++
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 558 DKARDIHQKWL 568
            +A ++H++ L
Sbjct: 61  RRAVELHRRML 71


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 209/424 (49%), Gaps = 3/424 (0%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            ++R LCL  ++   L L       G +P V+ +N L++  C+ GD+ +   ++ EM    
Sbjct: 984  LVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNG 1043

Query: 184  PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              P   TY + I    +  +L+K   LF  M   G  PN   +N ++ ALC       A+
Sbjct: 1044 FLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAM 1103

Query: 244  KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
              L ++ A        D+IT   L+      G   +A     +  ++ +  + ++Y  LI
Sbjct: 1104 VILKQMFASG---CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLI 1160

Query: 304  NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            +GFC+ G++  A     +M+ RG  PDV+T+  L++ L   GK+ EA      +++  V 
Sbjct: 1161 HGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF 1220

Query: 364  PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            PD   Y  +I GLC    +  A+  L  MLEK+V P+  ++  +IDG+ R  +L +A  I
Sbjct: 1221 PDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKI 1280

Query: 424  RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
             + M   GV  ++ + NA+I    + G + +A      M   G  PD FTY  +I     
Sbjct: 1281 FEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAK 1340

Query: 484  LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
             G+++ AL+   +M++R   P+++TY+ LI G+C  G+   AE +FA +Q   L+ + + 
Sbjct: 1341 QGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVT 1400

Query: 544  FRIL 547
            + IL
Sbjct: 1401 YTIL 1404



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 182/390 (46%), Gaps = 3/390 (0%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            +I   C  G +G  L L  +M   G +P ++T+  L+N L K GDLEK   +  EM +  
Sbjct: 1019 LIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRG 1078

Query: 184  PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             SPN   YN+ I   C      +A+ +   M  +G  P+ +T N L+  LC +G +  A 
Sbjct: 1079 FSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAE 1138

Query: 244  KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             FL E +  +      + ++ T L+  +   G+   A  L  +M  +    D+V +  LI
Sbjct: 1139 HFLREAIRRE---LNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALI 1195

Query: 304  NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            +G  + G +S A     +M +R   PDV  YN L++ LCK+  L  A +    + +  V 
Sbjct: 1196 HGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQ 1255

Query: 364  PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            PD+  Y T+I G     ++  AR+    M  K V P+    N +I GY + G +S A   
Sbjct: 1256 PDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILC 1315

Query: 424  RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
               M   G   + FT+  +I    + G++  A     +M+     P+V TY+ LI   C 
Sbjct: 1316 MSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCK 1375

Query: 484  LGHIHLALQLYDEMLRRGITPDIITYTELI 513
             G    A  L+  M    ++P+++TYT LI
Sbjct: 1376 TGDTDSAEGLFANMQAEALSPNVVTYTILI 1405



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 217/470 (46%), Gaps = 20/470 (4%)

Query: 87   FNALDLILKENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWL-RRK 143
            F+A+D       D L++M   G  P R  L        A++      G +G A  +  R 
Sbjct: 888  FDAVD-------DTLQSMSLAGAAPTRACLG-------ALVAAYADAGMLGKATEMCERV 933

Query: 144  MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
              Q G++P+V   N L+  L +    + A  +  EM       +  +    + G C    
Sbjct: 934  REQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERR 993

Query: 204  LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            +++ L L       G  P+ V +N+L+   C++G +G  +  LGE+   +       ++T
Sbjct: 994  VEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEM---ETNGFLPTLVT 1050

Query: 264  STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
               L++   K GD  +  +L+ +M ++    ++  YN +I+  C     + A     QM 
Sbjct: 1051 YGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMF 1110

Query: 324  KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
              G  PD+IT+NTL+  LC +G + +A HF     +  + P+Q+SY  +I G C+ G+++
Sbjct: 1111 ASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELM 1170

Query: 384  KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
             A + L+ M+ +   P+   +  +I G    G +S A  +R+ M    V  +V  +N LI
Sbjct: 1171 VASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLI 1230

Query: 444  LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                +   +  A ++ +EML   + PD F Y  LI       ++  A ++++ M  +G+ 
Sbjct: 1231 SGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVC 1290

Query: 504  PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
            PDI++   +IKG+C  G M EA    + ++ +G   D   +  +   Y +
Sbjct: 1291 PDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAK 1340



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 191/448 (42%), Gaps = 53/448 (11%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +VI  LC       A+ + ++M   G  PD++T N L+  LC  G + KA+H +RE    
Sbjct: 1088 SVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRR 1147

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              +PN  +Y   I G+C   EL  A  L   M   G  P+ VT   L+H L   G + +A
Sbjct: 1148 ELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEA 1207

Query: 243  VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +  + E + +   +   DV    +L+    K      A  +  +M +KN+Q D   Y  L
Sbjct: 1208 L-IVREKMTER--QVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATL 1264

Query: 303  INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            I+GF  + ++  A   F  M  +G  PD+++ N ++   C+ G + EA      + K G 
Sbjct: 1265 IDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGC 1324

Query: 363  APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             PD+ +Y T+I G    G++  A  +L  M+++   P    ++ +I+GY + GD  +A  
Sbjct: 1325 IPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEG 1384

Query: 423  IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT--------- 473
            +   M +  +S NV T+  LI +  +   +  A    + MLL+   P+  T         
Sbjct: 1385 LFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLT 1444

Query: 474  -----------------------------------------YNLLIGASCNLGHIHLALQ 492
                                                     YN +I + C    +  AL 
Sbjct: 1445 SCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALD 1504

Query: 493  LYDEMLRRGITPDIITYTELIKGHCARG 520
              + M ++G  P+ IT+  L+ G C+ G
Sbjct: 1505 FKNRMAKKGYVPNPITFLSLLYGFCSVG 1532



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            A+I  L + GK+  AL +R KM ++   PDV  +N L++ LCK   L  A +++ EM E 
Sbjct: 1193 ALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEK 1252

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               P+   Y   I G+ R   L  A  +F  M + G+ P+ V+ N ++   C+ G++ +A
Sbjct: 1253 NVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEA 1312

Query: 243  VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +  +  +          D  T T ++  Y K G+   AL    DM ++  + ++V Y+ L
Sbjct: 1313 ILCMSNM---RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSL 1369

Query: 303  INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            ING+C  GD  SA   F  M      P+V+TY  L+  L K+ K+  A  ++  +     
Sbjct: 1370 INGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHC 1429

Query: 363  APDQISYKTIIQGL-----------CIHGDIVKAREFLLSMLEKSVV----PEPHIWNVI 407
            +P+ ++   ++ GL           C +   V  ++ LL + +K V     P    +N I
Sbjct: 1430 SPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAI 1489

Query: 408  IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
            I    R   L  A   ++ M   G   N  TF +L+      G   +  ++         
Sbjct: 1490 IFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQEE 1549

Query: 468  FPDVFTYNLL 477
            F  +F Y  L
Sbjct: 1550 FEIIFRYKFL 1559



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 174/416 (41%), Gaps = 4/416 (0%)

Query: 151  PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
            P  L H+ L+  L +    +  D  ++ MS    +P  A   A +  Y     L KA  +
Sbjct: 870  PTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEM 929

Query: 211  FSTMANNGIRPNRVTH-NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
               +         VTH N L+  L ++    DA K   E+L  D G   +D  ++ +L+ 
Sbjct: 930  CERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSG---ADNYSTCVLVR 986

Query: 270  SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
                     + L L    +       +V YNVLI+G+C  GD+        +M   GFLP
Sbjct: 987  GLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLP 1046

Query: 330  DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
             ++TY +L+N L K+G L++    +  + K G +P+   Y ++I  LC      +A   L
Sbjct: 1047 TLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVIL 1106

Query: 390  LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
              M      P+   +N +I G    G +  A       +   ++ N  ++  LI      
Sbjct: 1107 KQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMR 1166

Query: 450  GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
            G +  A  L  EM+  G  PDV T+  LI      G +  AL + ++M  R + PD+  Y
Sbjct: 1167 GELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIY 1226

Query: 510  TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
              LI G C +  +  A+ +  ++    +  D   +  L   + R +    AR I +
Sbjct: 1227 NVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 1282


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 195/360 (54%), Gaps = 5/360 (1%)

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN  I  YCR   L++A  + ++MA+ G++P+  T+N +++ LCKKG    A   L E
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKF-QALALWNDMFQKNIQTDIVAYNVLINGFC 307
           +L  + G +      +T+L++S  +  D F +A  ++ +M ++ +  D+V+++ L+  F 
Sbjct: 62  ML--NIGLSPDTTTYNTLLVESCRR--DNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFS 117

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            N  +  A  YF  M K G +PD + Y  L++  C+ G + EA      + + G   D I
Sbjct: 118 RNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVI 177

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y TI+ GLC    +  A +    M+E+  +P+ + +  +I G+ + G+++ A S+   M
Sbjct: 178 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 237

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
               +  ++  +N LI    + G +  A  L   M+   IFP+  TY +LI A C++GH+
Sbjct: 238 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHV 297

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A +L+D M+ +GI P ++T   +IKG+C  G+  +A+E   ++   G+A DHI +  L
Sbjct: 298 SEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 357



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 191/361 (52%), Gaps = 3/361 (0%)

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           ++T+N L+   C+ G LE+A  ++  M++    P+  TYNA I G C+     +A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M N G+ P+  T+N L+   C++    +A +  GE+L         D+++ + LM  + 
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQG---VVPDLVSFSSLMAVFS 117

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           +N    QAL  + DM +  +  D V Y VL++G+C NG++  A     +ML++G + DVI
Sbjct: 118 RNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVI 177

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            YNT+LN LCK+  L +A   +  + + G  PD  ++ T+I G C  G++ KA     +M
Sbjct: 178 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 237

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
            ++++ P+   +N +IDG+ + G++  A  + D M+S  +  N  T+  LI A    G +
Sbjct: 238 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHV 297

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +AF L   M+  GI P + T N +I   C  G    A +    M+ +G+ PD I+Y  L
Sbjct: 298 SEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 357

Query: 513 I 513
           I
Sbjct: 358 I 358



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 180/356 (50%), Gaps = 3/356 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G +  A  +   M  KG  P + T+N ++N LCK G   +A  ++ EM  +
Sbjct: 6   TLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNI 65

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SP+  TYN  +   CR +   +A  +F  M   G+ P+ V+ + L+    +   L  A
Sbjct: 66  GLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQA 125

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           + +  ++          D +  T+LM  Y +NG+  +AL + ++M ++    D++AYN +
Sbjct: 126 LVYFRDM---KKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +NG C    ++ A   F +M++RG LPD  T+ TL++  C+ G + +A   +G +++  +
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y T+I G C  G++ KA E    M+ + + P    + ++I+ Y   G +S AF 
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR 302

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           + D+M+  G+   + T N +I    R G    A      M+  G+ PD  +YN LI
Sbjct: 303 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 175/351 (49%), Gaps = 8/351 (2%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +L+E  + + +M D G     L+     + A+I  LC  G+   A  +  +M+  G  PD
Sbjct: 16  LLEEAFEIMNSMADKG-----LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPD 70

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
             T+N L+ E C+  +  +A  +  EM      P+  ++++ +  + R   LD+AL  F 
Sbjct: 71  TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFR 130

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M   G+ P+ V + +L+H  C+ G + +A+K   E+L   +     DVI    +++   
Sbjct: 131 DMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEML---EQGCVLDVIAYNTILNGLC 187

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K      A  L+++M ++    D   +  LI+G C +G+++ A + F  M +R   PD++
Sbjct: 188 KEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIV 247

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            YNTL++  CK G++++AS  +  +    + P+ I+Y  +I   C  G + +A      M
Sbjct: 248 AYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM 307

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +EK + P     N +I GY R GD S A      M++ GV+ +  ++N LI
Sbjct: 308 IEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 149/291 (51%)

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           ++T   L+ +Y + G   +A  + N M  K ++  +  YN +ING C  G  + A     
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +ML  G  PD  TYNTLL   C++    EA   +G + + GV PD +S+ +++     + 
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            + +A  +   M +  +VP+  I+ V++ GY R G++  A  IRD ML  G   +V  +N
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            ++    +   + DA  L  EM+  G  PD +T+  LI   C  G++  AL L+  M +R
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            I PDI+ Y  LI G C  G M++A E++  + +  +  +HI + IL   Y
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 291



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 134/275 (48%)

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           +V YN LI  +C  G +  AF     M  +G  P + TYN ++N LCK+G+   A     
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +   G++PD  +Y T++   C   +  +A+E    ML + VVP+   ++ ++  + R  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            L  A      M  FG+  +   +  L+    R G++ +A  ++ EML  G   DV  YN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            ++   C    +  A +L+DEM+ RG  PD  T+T LI GHC  GNM +A  +F  +   
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            +  D + +  L   + ++ E +KA ++    + R
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISR 275


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 222/449 (49%), Gaps = 7/449 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  L   G +  AL L  +M ++G  PDV  +N L++   K GD+  A  + 
Sbjct: 183 DVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW 242

Query: 177 REMSEMRPS--PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
             + +  PS  PN  +YN  I G C+  + D++  ++  M  N    +  T++ L+H LC
Sbjct: 243 ERLLK-GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G L  A +   E+    +   + DV+    +++ Y + G   + L LW  M ++  +T
Sbjct: 302 GSGNLDGATRVYKEMA---ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT 358

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
            +V+YN+LI G   N  +  A + +  + ++    D +TY  L++ LCK G L++A    
Sbjct: 359 -VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSIL 417

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
                     D  +Y ++I GLC  G + +    L  M +    P PH+ N +I+G+ R 
Sbjct: 418 EEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRA 477

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
             L +A      M+S G    V T+N LI   ++     +A++L KEML  G  P++ TY
Sbjct: 478 SKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITY 537

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           +LL+   C    + +AL L+ + L +G  PD+  +  +I G C+ G +++A +++++++ 
Sbjct: 538 SLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQ 597

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDI 563
                + +    L + + ++++ ++A  I
Sbjct: 598 RKCVPNLVTHNTLMEGFYKVRDFERASKI 626



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 208/416 (50%), Gaps = 7/416 (1%)

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
            + +W  R +      P++ ++N ++N LCK G  +++  +   M +     +  TY+  
Sbjct: 238 ASEIW-ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTL 296

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           I G C    LD A  ++  MA NG+ P+ V +N +++   + G + + ++ L +V+  + 
Sbjct: 297 IHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE-LWKVMEKEG 355

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
            +    V++  IL+   F+N    +A+++W  + +K+   D + Y VL++G C NG ++ 
Sbjct: 356 CRT---VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNK 412

Query: 315 AFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
           A +   +    RG L D   Y++++N LC++G+LDE +     ++K G  P+      +I
Sbjct: 413 ALSILEEAENGRGDL-DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVI 471

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            G      +  A  F  +M+ K   P    +N +I+G  +    S A+++   ML  G  
Sbjct: 472 NGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWK 531

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            N+ T++ L+    +G  +  A +L  + L  G  PDV  +N++I   C+ G +  ALQL
Sbjct: 532 PNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQL 591

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           Y EM +R   P+++T+  L++G     + + A +++  I   G   D I + I  K
Sbjct: 592 YSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLK 647



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 184/390 (47%), Gaps = 5/390 (1%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P + ++N L+N L +    ++A+        M  SPN  TYN  I   CR  + DKA
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L + M   G  P+  ++  L+++L K G + DA+K   E+    +   T DV    IL
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEM---PERGVTPDVACYNIL 225

Query: 268 MDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +D +FK GD   A  +W  + +  ++  +I +YNV+ING C  G    +F  + +M K  
Sbjct: 226 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 285

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
              D+ TY+TL++ LC  G LD A+  Y  +++ GV+PD + Y T++ G    G I +  
Sbjct: 286 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E L  ++EK        +N++I G      +  A SI +L+      ++  T+  L+   
Sbjct: 346 E-LWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G +  A S+ +E        D F Y+ +I   C  G +     + D+M + G  P+ 
Sbjct: 405 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
                +I G      +++A   F  + + G
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKG 494



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 191/397 (48%), Gaps = 8/397 (2%)

Query: 124 VIRDLCLGGKIGTA--LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           +I  LC  GK   +  +W R K  ++G   D+ T++ L++ LC  G+L+ A  V +EM+E
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNERGQ--DLYTYSTLIHGLCGSGNLDGATRVYKEMAE 318

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
              SP+   YN  + GY R   +++ L L+  M   G R   V++NIL+  L +   + +
Sbjct: 319 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDE 377

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+  + E+L + D    +D +T  +L+    KNG   +AL++  +        D  AY+ 
Sbjct: 378 AIS-IWELLPEKD--CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSS 434

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +ING C  G +        QM K G  P+    N ++N   +  KL++A  F+G +   G
Sbjct: 435 MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG 494

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             P  ++Y T+I GL       +A   +  ML K   P    ++++++G  +   L  A 
Sbjct: 495 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMAL 554

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           ++    L  G   +V   N +I      G + DA  L  EM      P++ T+N L+   
Sbjct: 555 NLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
             +     A +++D +L+ G  PDII+Y   +KG C+
Sbjct: 615 YKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCS 651



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 170/359 (47%), Gaps = 9/359 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E L+  K M   G   C     Y     +IR L    K+  A+ +   + +K    D 
Sbjct: 341 IEECLELWKVMEKEG---CRTVVSYN---ILIRGLFENAKVDEAISIWELLPEKDCCADS 394

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+  LV+ LCK G L KA  ++ E    R   +   Y++ I G CR   LD+   +   
Sbjct: 395 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQ 454

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  +G +PN    N +++   +   L DA++F G +++         V+T   L++   K
Sbjct: 455 MTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG---CFPTVVTYNTLINGLSK 511

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                +A AL  +M  K  + +++ Y++L+NG C    +  A   +CQ L++GF PDV  
Sbjct: 512 AERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKM 571

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           +N +++ LC  GK+++A   Y  + +    P+ +++ T+++G     D  +A +    +L
Sbjct: 572 HNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHIL 631

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +    P+   +N+ + G   C  +S+A    +  +  GV     T+N L+ A    G++
Sbjct: 632 QYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 146/295 (49%), Gaps = 12/295 (4%)

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-----NIQTDIVAYNVL 302
           E++     K   DV  + I   +Y KN    QAL    D+FQ+       Q  I +YN L
Sbjct: 67  ELIRTQKCKCPEDVALTVI--KAYAKNSMPDQAL----DIFQRMHEIFGCQPGIRSYNSL 120

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +N    +     A ++F      G  P++ TYN L+   C++ + D+A      + + G 
Sbjct: 121 LNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGF 180

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           +PD  SY T+I  L  +G +  A +    M E+ V P+   +N++IDG+ + GD+ NA  
Sbjct: 181 SPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASE 240

Query: 423 IRDLML-SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           I + +L    V  N+ ++N +I    + G   ++F +   M  +    D++TY+ LI   
Sbjct: 241 IWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGL 300

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           C  G++  A ++Y EM   G++PD++ Y  ++ G+   G ++E  E++  ++  G
Sbjct: 301 CGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 38/226 (16%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AVI       K+  AL     M+ KG  P V+T+N L+N L K     +A  +++EM   
Sbjct: 469 AVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK 528

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY+  + G C+  +LD AL+L+      G +P+   HNI++H LC  G + DA
Sbjct: 529 GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDA 588

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV- 301
           ++   E+      K   +++T   LM+ ++K  D  +A  +W+ + Q   Q DI++YN+ 
Sbjct: 589 LQLYSEM---KQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNIT 645

Query: 302 ----------------------------------LINGFCLNGDIS 313
                                             L+     NG ++
Sbjct: 646 LKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGALT 691



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 5/166 (3%)

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLS-FGVSSNVFTFNALI--LAETRGGSIFDAFSLKKEM 462
            +I  Y +      A  I   M   FG    + ++N+L+  L E+      ++F L  E 
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           +  G+ P++ TYN+LI  SC       A +L + M  +G +PD+ +Y  LI      G M
Sbjct: 143 M--GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYM 200

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            +A ++F ++   G+  D   + IL   + +  +   A +I ++ L
Sbjct: 201 SDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLL 246


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 218/433 (50%), Gaps = 11/433 (2%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
             +L  +M   G  PD  T N L+N LC +  + +   V+  +      P+  TY   I 
Sbjct: 115 VFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIK 174

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C  + + KA  LF+ M   G  PN +T+  L+  LC+ G +  A+K   E+L D    
Sbjct: 175 GLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLY 234

Query: 257 ATS---DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
             +    VI+ +I++D+  K+  + +A  L+ +M  + +   +++Y  L+          
Sbjct: 235 GINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WE 286

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A   F +M+ +G  P+V+T+N L++ LCK+GK+ EA     V+ + G+ P+ ++Y ++I
Sbjct: 287 EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 346

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
           +G C+ GD+  ARE  +SM  K   P+   + V+I+GY +   +  A  + + ML  G  
Sbjct: 347 EGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR 406

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            +V T+ AL+    +GG + DA  L   M + GI  D++ Y + +   C  G +  A++L
Sbjct: 407 PDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMEL 466

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           ++++    I  DI  +  LI G C  G ++ A E+F K+    L  D + + I+   + R
Sbjct: 467 FNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCR 526

Query: 554 MKESDKARDIHQK 566
             +  KA  + QK
Sbjct: 527 GGQVVKANILFQK 539



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 223/469 (47%), Gaps = 39/469 (8%)

Query: 104 MRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           MR +G  P  CTL         ++  LC   ++G  L +   ++++G +PD++T+  L+ 
Sbjct: 122 MRLSGISPDCCTLNI-------LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIK 174

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG--- 218
            LC    + KA  +   M ++  +PN  TY   + G CR   +  AL L   M N+    
Sbjct: 175 GLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLY 234

Query: 219 ---IRPNRVTHNILVHALCK----------------KGLLGDAVKFLGEVLADD------ 253
               +P  ++++I++ ALCK                +G+    + +   +  +       
Sbjct: 235 GINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNE 294

Query: 254 --DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     +V+T  +L+D   K G   +A  L   M Q+ I  +++ YN LI GFCL GD
Sbjct: 295 MVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGD 354

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           ++SA   F  M  +G  PDVI Y  L+N  CK  K++EA   Y  + + G  PD  +Y  
Sbjct: 355 LNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGA 414

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++ GL   G +  A++    M    +  + +I+ + ++G  + G L  A  + + + S+ 
Sbjct: 415 LLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYN 474

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  ++  FN LI    + G +  A+ L +++  + + PDV TYN++I   C  G +  A 
Sbjct: 475 IKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKAN 534

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            L+ +M + G TPD ITY  LI+G      +++  E+   +    +++D
Sbjct: 535 ILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 583



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 193/390 (49%), Gaps = 17/390 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTV------PDVLTHNYLVNELCKIGDLEKADHVI 176
            +++ LC  G I  AL L ++M+   ++      P V++++ +++ LCK    ++A  + 
Sbjct: 206 TLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLF 265

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM     +P   +Y + +         ++A  LF+ M N G++PN VT N+L+  LCK+
Sbjct: 266 EEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKE 317

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A K L EV+         +++T   L++ +   GD   A  L+  M  K  + D+
Sbjct: 318 GKVIEA-KDLLEVMIQRG--IVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDV 374

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + Y VLING+C    +  A   +  ML+ G  PDV TY  LL  L + GK+ +A   +GV
Sbjct: 375 ICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGV 434

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G+  D   Y   + GLC +G + +A E    +   ++  +   +N +IDG  + G 
Sbjct: 435 MKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGK 494

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L  A+ + + +    +  +V T+N +I    RGG +  A  L ++M  +G  PD  TY  
Sbjct: 495 LETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYAT 554

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDI 506
           LI        +   ++L   M++R ++ D+
Sbjct: 555 LIRGFFESKKLEKVVELLHMMVQRDVSLDV 584



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 149/296 (50%), Gaps = 14/296 (4%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           Q   L+N M    I  D    N+L+N  C    +    A    +L+RG++PD++TY TL+
Sbjct: 114 QVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLI 173

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             LC + ++ +A+  +  + K G  P+ I+Y T+++GLC  G+I  A +    ML  S +
Sbjct: 174 KGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSL 233

Query: 399 ------PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
                 P    +++IID   +      A  + + M   G++  V ++ +L+  E +    
Sbjct: 234 YGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAK---- 289

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
                L  EM+  G+ P+V T+N+LI   C  G +  A  L + M++RGI P+++TY  L
Sbjct: 290 ----RLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSL 345

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           I+G C  G++  A E+F  + + G   D I + +L   Y +  + ++A  ++   L
Sbjct: 346 IEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGML 401



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 71/149 (47%)

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AF    LM+    +  + +F  L+    +       F L  +M L GI PD  T N+L+ 
Sbjct: 80  AFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLN 139

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             CN+  +   L +   +LRRG  PDI+TYT LIKG C    + +A  +F ++Q LG   
Sbjct: 140 CLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTP 199

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWL 568
           + I +  L K   R      A  +HQ+ L
Sbjct: 200 NAITYGTLMKGLCRTGNISIALKLHQEML 228



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 119/296 (40%), Gaps = 51/296 (17%)

Query: 79  NEG-NPQAV-FNAL-DLILKENL-----DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCL 130
           N+G  P  V FN L D++ KE       D L+ M   G V   L  +     ++I   CL
Sbjct: 297 NQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYN-----SLIEGFCL 351

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G + +A  L   M  KG  PDV+ +  L+N  CK   +E+A  +   M ++   P+  T
Sbjct: 352 VGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 411

Query: 191 YNA-----------------------------------FITGYCRVNELDKALHLFSTMA 215
           Y A                                   F+ G C+   L +A+ LF+ + 
Sbjct: 412 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 471

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           +  I+ +    N L+  LCK G L  A +   ++  ++      DV+T  I++  + + G
Sbjct: 472 SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEE---LQPDVVTYNIMIHEFCRGG 528

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
              +A  L+  M +     D + Y  LI GF  +  +         M++R    DV
Sbjct: 529 QVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 8/198 (4%)

Query: 377 CIHGDI--VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           C  G+I  ++A +F   M+  +  P    +  ++ G  +    S  F + + M   G+S 
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +  T N L+        + +  ++   +L  G  PD+ TY  LI   C    I  A  L+
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 495 DEMLRRGITPDIITYTELIKGHCARGN----MKEAEEVFAKIQTLGLAIDH--IPFRILK 548
             M + G TP+ ITY  L+KG C  GN    +K  +E+       G+      I + I+ 
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 549 KRYRRMKESDKARDIHQK 566
               + +  D+ARD+ ++
Sbjct: 250 DALCKDRREDEARDLFEE 267


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 225/461 (48%), Gaps = 11/461 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  L   G +  AL L  +M ++G  PDV  +N L++   K GD+  A  + 
Sbjct: 183 DVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW 242

Query: 177 REMSEMRPS--PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
             + +  PS  PN  +YN  I G C+  + D++  ++  M  N    +  T++ L+H LC
Sbjct: 243 ERLLK-GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G L  A +   E+    +   + DV+    +++ Y + G   + L LW  M ++  +T
Sbjct: 302 GSGNLDGATRVYKEMA---ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT 358

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
            +V+YN+LI G   N  +  A + +  + ++    D +TY  L++ LCK G L++A    
Sbjct: 359 -VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSIL 417

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
                     D  +Y ++I GLC  G + +    L  M +    P PH+ N +I+G+ R 
Sbjct: 418 EEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRA 477

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
             L +A      M+S G    V T+N LI   ++     +A++L KEML  G  P++ TY
Sbjct: 478 SKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITY 537

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           +LL+   C    + +AL L+ + L +G  PD+  +  +I G C+ G +++A +++++++ 
Sbjct: 538 SLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQ 597

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIH----QKWLLRN 571
                + +    L + + ++++ ++A  I     Q W   N
Sbjct: 598 RKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSN 638



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 184/390 (47%), Gaps = 5/390 (1%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P + ++N L+N L +    ++A+        M  SPN  TYN  I   CR  + DKA
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L + M   G  P+  ++  L+++L K G + DA+K   E+    +   T DV    IL
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEM---PERGVTPDVACYNIL 225

Query: 268 MDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +D +FK GD   A  +W  + +  ++  +I +YNV+ING C  G    +F  + +M K  
Sbjct: 226 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 285

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
              D+ TY+TL++ LC  G LD A+  Y  +++ GV+PD + Y T++ G    G I +  
Sbjct: 286 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E L  ++EK        +N++I G      +  A SI +L+      ++  T+  L+   
Sbjct: 346 E-LWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 404

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G +  A S+ +E        D F Y+ +I   C  G +     + D+M + G  P+ 
Sbjct: 405 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 464

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
                +I G      +++A   F  + + G
Sbjct: 465 HVCNAVINGFVRASKLEDALRFFGNMVSKG 494



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 163/382 (42%), Gaps = 70/382 (18%)

Query: 124 VIRDLCLGGKIGTA--LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           +I  LC  GK   +  +W R K  ++G   D+ T++ L++ LC  G+L+ A  V +EM+E
Sbjct: 261 MINGLCKCGKFDESFEIWHRMKKNERGQ--DLYTYSTLIHGLCGSGNLDGATRVYKEMAE 318

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR--------------------- 220
              SP+   YN  + GY R   +++ L L+  M   G R                     
Sbjct: 319 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEA 378

Query: 221 -------PNR------VTHNILVHALCKKGLLGDAVKFLGEV---LADDDGKATSDVITS 264
                  P +      +T+ +LVH LCK G L  A+  L E      D D  A S +I  
Sbjct: 379 ISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMING 438

Query: 265 TI----------LMDSYFKNGDKFQ-------------------ALALWNDMFQKNIQTD 295
                       ++D   K+G K                     AL  + +M  K     
Sbjct: 439 LCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPT 498

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           +V YN LING       S A+A   +ML +G+ P++ITY+ L+N LC+  KLD A + + 
Sbjct: 499 VVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWC 558

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
              + G  PD   +  II GLC  G +  A +    M ++  VP     N +++G+ +  
Sbjct: 559 QALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVR 618

Query: 416 DLSNAFSIRDLMLSFGVSSNVF 437
           D   A  I D +L    SSN +
Sbjct: 619 DFERASKIWDHILQSWSSSNCY 640



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 146/295 (49%), Gaps = 12/295 (4%)

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-----NIQTDIVAYNVL 302
           E++     K   DV  + I   +Y KN    QAL    D+FQ+       Q  I +YN L
Sbjct: 67  ELIRTQKCKCPEDVALTVI--KAYAKNSMPDQAL----DIFQRMHEIFGCQPGIRSYNSL 120

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +N    +     A ++F      G  P++ TYN L+   C++ + D+A      + + G 
Sbjct: 121 LNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGF 180

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           +PD  SY T+I  L  +G +  A +    M E+ V P+   +N++IDG+ + GD+ NA  
Sbjct: 181 SPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASE 240

Query: 423 IRDLML-SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           I + +L    V  N+ ++N +I    + G   ++F +   M  +    D++TY+ LI   
Sbjct: 241 IWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGL 300

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           C  G++  A ++Y EM   G++PD++ Y  ++ G+   G ++E  E++  ++  G
Sbjct: 301 CGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 355



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 5/166 (3%)

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLS-FGVSSNVFTFNALI--LAETRGGSIFDAFSLKKEM 462
            +I  Y +      A  I   M   FG    + ++N+L+  L E+      ++F L  E 
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           +  G+ P++ TYN+LI  SC       A +L + M  +G +PD+ +Y  LI      G M
Sbjct: 143 M--GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYM 200

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            +A ++F ++   G+  D   + IL   + +  +   A +I ++ L
Sbjct: 201 SDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLL 246


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 216/448 (48%), Gaps = 3/448 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G    + +L +KM + G  P ++T+N +++  CK G  + A  ++  M+   
Sbjct: 199 LINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKG 258

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            + +  TYN  I   CR N   K   L   M    I PN VT+N L++    +G +  A 
Sbjct: 259 VNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIAR 318

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E+L       + + +T   L+D +   G+  +AL +++ M  K +    V+Y VL+
Sbjct: 319 QLLNEMLTFG---LSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLL 375

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C N +   A  ++ +M + G     ITY  +++ LCK G LDEA      +SK G+ 
Sbjct: 376 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGID 435

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y  +I G C  G +  A+E +  +    + P   I++ +I    R G L     I
Sbjct: 436 PDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRI 495

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M+  G + + FTFN L+ +  + G + +A    + M  DGI P+  +++ LI    +
Sbjct: 496 YEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGS 555

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G    A  ++DEM + G  P   TY  L+KG C  G++  AE+    +Q +  A+D + 
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVM 615

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLRN 571
              L     +    DKA  +  + + R+
Sbjct: 616 CNTLITAMCKSGNLDKAVSLFGEMVQRS 643



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 204/428 (47%), Gaps = 4/428 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  G +  A+ +  +M + G  PD++T++ L+N  C++G L+ A  ++  + 
Sbjct: 406 YTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIY 465

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            +  SPN   Y+  I   CR+  L + + ++  M   G  P+  T N+LV +LCK G + 
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVA 525

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +F+  + +D       + ++   L++ Y  +G+  +A +++++M +         Y 
Sbjct: 526 EAEEFMRCMTSDG---ILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYG 582

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L+ G C  G + +A  +   +       D +  NTL+  +CK G LD+A   +G + + 
Sbjct: 583 SLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQR 642

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYGRCGDLSN 419
            + PD  +Y ++I GLC  G  V A  F      + ++VP   ++   +DG  + G    
Sbjct: 643 SILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKA 702

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
            F  R  M   G++ +V T NA+I   +R G I     L  EM      P++ TYN+L+ 
Sbjct: 703 GFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLH 762

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                 H+  +  LY  M+  GI PD +T   +I G C    ++   ++       G+ +
Sbjct: 763 GYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEV 822

Query: 540 DHIPFRIL 547
           D   F +L
Sbjct: 823 DRHTFNML 830



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 198/446 (44%), Gaps = 45/446 (10%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            V+   C  G+   A+ L   M  KG   DV T+N L+++LC+     K   ++R+M + 
Sbjct: 233 TVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKR 292

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN  + G+    ++  A  L + M   G+ PN VT N L+     +G   +A
Sbjct: 293 MIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEA 352

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K     + +  G   ++V +  +L+D   KN +   A   +  M +  +    + Y  +
Sbjct: 353 LKMFH--MMEAKGLIGTEV-SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C NG +  A     +M K G  PD++TY+ L+N  C+ G+L  A      + + G+
Sbjct: 410 IDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGL 469

Query: 363 APDQISYKTII-----------------------------------QGLCIHGDIVKARE 387
           +P+ I Y T+I                                     LC  G + +A E
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEE 529

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
           F+  M    ++P    ++ +I+GYG  G+   AFS+ D M   G     FT+ +L+    
Sbjct: 530 FMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +GG +  A    K +       D    N LI A C  G++  A+ L+ EM++R I PD  
Sbjct: 590 KGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSF 649

Query: 508 TYTELIKGHCARGNM-------KEAE 526
           TYT LI G C +G         KEAE
Sbjct: 650 TYTSLISGLCRKGKTVIAILFAKEAE 675



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 131/517 (25%), Positives = 214/517 (41%), Gaps = 74/517 (14%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I DLC   +      L R M ++   P+ +T+N L+N     G +  A  ++ EM    
Sbjct: 269 LIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFG 328

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SPN  T+NA I G+       +AL +F  M   G+    V++ +L+  LCK      A 
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLAR 388

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            F   +    +G      IT T ++D   KNG   +A+ + N+M +  I  DIV Y+ LI
Sbjct: 389 GFYMRM--KRNGVCVGR-ITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALI 445

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NGFC  G + +A    C++ + G  P+ I Y+TL+   C+ G L E    Y  +   G  
Sbjct: 446 NGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNT 505

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  ++  ++  LC  G + +A EF+  M    ++P    ++ +I+GYG  G+   AFS+
Sbjct: 506 PDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSV 565

Query: 424 RDLMLSFGVSSNVFTF-----------------------------------NALILAETR 448
            D M   G     FT+                                   N LI A  +
Sbjct: 566 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCK 625

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE------------ 496
            G++  A SL  EM+   I PD FTY  LI   C  G   +A+    E            
Sbjct: 626 SGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKV 685

Query: 497 ------------------------MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
                                   M + G+T D++T   +I G+   G +++  ++  ++
Sbjct: 686 MYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEM 745

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
                  +   + IL   Y + K    +  +++  +L
Sbjct: 746 GNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMIL 782



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 201/440 (45%), Gaps = 3/440 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR     G I  +L + R M   G  P V T N ++  + K  +       ++EM + +
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRK 188

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+ AT+N  I   C      K+ +L   M  +G  P  VT+N ++H  CKKG    A+
Sbjct: 189 ICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L  +   +     +DV T  +L+    ++    +   L  DM ++ I  + V YN L+
Sbjct: 249 ELLDHM---NLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLL 305

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NGF   G +  A     +ML  G  P+ +T+N L++    +G   EA   + ++   G+ 
Sbjct: 306 NGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLI 365

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
             ++SY  ++ GLC + +   AR F + M    V      +  +IDG  + G L  A  +
Sbjct: 366 GTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVM 425

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   G+  ++ T++ALI    R G +  A  +   +   G+ P+   Y+ LI   C 
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           +G +   +++Y+ M+  G TPD  T+  L+   C  G + EAEE    + + G+  + + 
Sbjct: 486 MGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVS 545

Query: 544 FRILKKRYRRMKESDKARDI 563
           F  L   Y    E  KA  +
Sbjct: 546 FDCLINGYGSSGEGLKAFSV 565



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/462 (23%), Positives = 212/462 (45%), Gaps = 41/462 (8%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++++ LC GG +  A    + +       D +  N L+  +CK G+L+KA  +  EM + 
Sbjct: 583  SLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQR 642

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFS--TMANNGIRPNRVTHNILVHALCKKGLLG 240
               P+  TY + I+G CR  +   A+ LF+    A   + PN+V +   V  + K G   
Sbjct: 643  SILPDSFTYTSLISGLCRKGKTVIAI-LFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWK 701

Query: 241  DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
                F  ++   D    T DV+T+  ++D Y + G   +   L  +M  +N   ++  YN
Sbjct: 702  AGFYFRQQM---DKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYN 758

Query: 301  VLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT--------------------------- 333
            +L++G+     +S++F  +  M+  G LPD +T                           
Sbjct: 759  ILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICR 818

Query: 334  --------YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
                    +N L++  C  G+++ A     V++  G++ D+ +   I+  L  +    ++
Sbjct: 819  GVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQES 878

Query: 386  REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            R  L  M ++ + PE   +  +++G  R GD+  AF +++ M++  +       +A++ A
Sbjct: 879  RMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938

Query: 446  ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
              + G   +A  L + ML   + P + ++  L+   C  G++  AL+L   M   G+  D
Sbjct: 939  LAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLD 998

Query: 506  IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +++Y  LI G CA+G+M  A E+F +++  G   +   ++ L
Sbjct: 999  LVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKAL 1040



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 205/442 (46%), Gaps = 32/442 (7%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   + A+I   C  G++ TA  +  ++ + G  P+ + ++ L+   C++G L++  
Sbjct: 434 IDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETI 493

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M     +P+  T+N  +T  C+  ++ +A      M ++GI PN V+ + L++  
Sbjct: 494 RIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGY 553

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA-----LWNDMF 288
              G  G+ +K            +  D +T      ++F  G   + L      +  + F
Sbjct: 554 ---GSSGEGLKAF----------SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKF 600

Query: 289 QKNIQ-----TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            K++Q      D V  N LI   C +G++  A + F +M++R  LPD  TY +L++ LC+
Sbjct: 601 LKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCR 660

Query: 344 QGKLDEASHFYGVLSKTG-VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           +GK   A  F       G + P+++ Y   + G+   G       F   M +  +  +  
Sbjct: 661 KGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVV 720

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFG---VSSNVFTFNALILAETRGGSIFDAFSLK 459
             N +IDGY R G +       DL+   G      N+ T+N L+   ++   +  +F L 
Sbjct: 721 TTNAMIDGYSRMGKIEKT---HDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLY 777

Query: 460 KEMLLDGIFPDVFT-YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
           + M+L GI PD  T Y++++G  C    + + L++    + RG+  D  T+  LI   CA
Sbjct: 778 RSMILSGILPDKLTCYSIILGI-CESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCA 836

Query: 519 RGNMKEAEEVFAKIQTLGLAID 540
            G +  A ++   + +LG+++D
Sbjct: 837 NGEINWAFDMVNVMTSLGISLD 858



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/401 (22%), Positives = 175/401 (43%), Gaps = 38/401 (9%)

Query: 131  GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
             G+     + R++M + G   DV+T N +++   ++G +EK   ++ EM      PN  T
Sbjct: 697  AGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTT 756

Query: 191  YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
            YN  + GY +   +  +  L+ +M  +GI P+++T   ++  +C+  +L   +K L   +
Sbjct: 757  YNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFI 816

Query: 251  ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                                                   + ++ D   +N+LI+  C NG
Sbjct: 817  C--------------------------------------RGVEVDRHTFNMLISKCCANG 838

Query: 311  DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +I+ AF     M   G   D  T + +++ L +  +  E+      +SK G++P+   Y 
Sbjct: 839  EINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 898

Query: 371  TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
             ++ GLC  GDI  A      M+   + P     + ++    +CG    A  +   ML  
Sbjct: 899  GLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKM 958

Query: 431  GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
             +   + +F  L+    + G++ +A  L+  M   G+  D+ +YN+LI   C  G + +A
Sbjct: 959  KLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIA 1018

Query: 491  LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
             +L++EM R G   ++ TY  L+ G  ++G      ++  K
Sbjct: 1019 FELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILK 1059



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 171/384 (44%), Gaps = 38/384 (9%)

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           N    +IL+    ++G++ D+++     L    G   S V T   ++ S  K+ +     
Sbjct: 122 NPSVFDILIRVYLREGMIQDSLEIFR--LMGLYGFNPS-VYTCNAILGSIVKSCEDVSVW 178

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
           +   +M ++ I  D+  +N+LIN  C  G    +     +M K G+ P ++TYNT+L+  
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK+G+   A      ++  GV  D  +Y  +I  LC      K    L  M ++ + P  
Sbjct: 239 CKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNE 298

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +N +++G+   G +  A  + + ML+FG+S N  TFNALI      G+  +A  +   
Sbjct: 299 VTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHM 358

Query: 462 M--------------LLDGIFPDV---------------------FTYNLLIGASCNLGH 486
           M              LLDG+  +                       TY  +I   C  G 
Sbjct: 359 MEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A+ + +EM + GI PDI+TY+ LI G C  G +K A+E+  +I  +GL+ + I +  
Sbjct: 419 LDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 547 LKKRYRRMKESDKARDIHQKWLLR 570
           L     RM    +   I++  +L 
Sbjct: 479 LIYNCCRMGCLKETIRIYEAMILE 502



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 110/240 (45%), Gaps = 16/240 (6%)

Query: 114  LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            +  + R+++ ++  LC  G I TA  ++ +MI     P  +  + +V  L K G  ++A 
Sbjct: 890  ISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAS 949

Query: 174  HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             ++R M +M+  P  A++   +  +C+   + +AL L   M+N G++ + V++N+L+  L
Sbjct: 950  LLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGL 1009

Query: 234  CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            C KG +  A +   E+  D      ++V T   L+      G +F               
Sbjct: 1010 CAKGDMAIAFELFEEMKRDG---FLANVTTYKALVGGILSQGTEFSG------------- 1053

Query: 294  TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            TDI+  ++L  GF      +    +  Q+    +L  +   +T++     + +LD  S+F
Sbjct: 1054 TDIILKDLLARGFITAMSFNHMINFPQQISVNAYLKHLFHCSTMILPFYHREELDVQSNF 1113



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/268 (21%), Positives = 120/268 (44%), Gaps = 3/268 (1%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++I  +C    +   L + +  I +G   D  T N L+++ C  G++  A  ++  M+ +
Sbjct: 794  SIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSL 853

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              S +  T +A ++   R +   ++  +   M+  GI P    +  L++ LC+ G +  A
Sbjct: 854  GISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTA 913

Query: 243  VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                 E++A    K     +  + ++ +  K G   +A  L   M +  +   I ++  L
Sbjct: 914  FVVKEEMIAH---KICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTL 970

Query: 303  INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            ++ FC NG+++ A      M   G   D+++YN L+  LC +G +  A   +  + + G 
Sbjct: 971  MHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGF 1030

Query: 363  APDQISYKTIIQGLCIHGDIVKAREFLL 390
              +  +YK ++ G+   G      + +L
Sbjct: 1031 LANVTTYKALVGGILSQGTEFSGTDIIL 1058


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 179/350 (51%), Gaps = 7/350 (2%)

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-- 257
           ++N    A   +  + + G  P+    N+L+H LCK+  + +A    GE+     GK   
Sbjct: 202 KLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI-----GKRGL 256

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
              V++   L++ Y K+G+  Q   L   M +  +  D+  Y+VLING C  G +  A  
Sbjct: 257 RPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANK 316

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            F +M  RG +P+ +T+ TL+N  C  G+ D     Y  + + GV PD I+Y T+I GLC
Sbjct: 317 LFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLC 376

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             GD+ +A++ ++ M ++ + P+   + ++IDG  + GDL +A  IR  M+  G+  +  
Sbjct: 377 KVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNV 436

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            F ALI    R G + +A    +EML  GI PD  TY ++I   C  G +    +L  EM
Sbjct: 437 AFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM 496

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
              G  P ++TY  L+ G C +G MK A  +   +  LG+  D I + IL
Sbjct: 497 QCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNIL 546



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 198/405 (48%), Gaps = 8/405 (1%)

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
           YL + L K+     A     E+ +    P+   +N  +   C+ +++++A  LF  +   
Sbjct: 195 YLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKR 254

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G+RP  V+ N L++  CK G L    +    ++   + +   DV T ++L++   K G  
Sbjct: 255 GLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM---ENRVFPDVFTYSVLINGLCKEGQL 311

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             A  L+ +M  + +  + V +  LING C+ G        + QML++G  PDVITYNTL
Sbjct: 312 DDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTL 371

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +N LCK G L EA      +++ G+ PD+ +Y  +I G C  GD+  A E    M+++ +
Sbjct: 372 INGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGI 431

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
             +   +  +I G+ R G +  A      ML  G+  +  T+  +I    + G +   F 
Sbjct: 432 ELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFK 491

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L KEM  DG  P V TYN+L+   C  G +  A  L D ML  G+ PD ITY  L++GHC
Sbjct: 492 LLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHC 551

Query: 518 ARGNMKEAEEVFAKIQT-LGLAIDHIPFRILKKRYRRMKESDKAR 561
             GN     E F K+Q+  GL  D+  +  L    R+  +  + R
Sbjct: 552 KHGN----REDFDKLQSEKGLVQDYGSYTSLIGDLRKTCKERQKR 592



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 187/390 (47%), Gaps = 14/390 (3%)

Query: 98  LDRLKTMRDTGP--------VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
            DRL  +  T P        + C    D  +   ++  LC   KI  A  L  ++ ++G 
Sbjct: 197 FDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGL 256

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P V++ N L+N  CK G+L++   + R M E R  P+  TY+  I G C+  +LD A  
Sbjct: 257 RPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANK 316

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           LF  M + G+ PN VT   L++  C  G     ++   ++L         DVIT   L++
Sbjct: 317 LFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG---VKPDVITYNTLIN 373

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K GD  +A  L  +M Q+ ++ D   Y +LI+G C  GD+ SA     +M+K G   
Sbjct: 374 GLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIEL 433

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           D + +  L++  C++G++ EA      + + G+ PD  +Y  +I G C  GD+    + L
Sbjct: 434 DNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLL 493

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M     VP    +NV+++G  + G + NA  + D ML+ GV  +  T+N L+    + 
Sbjct: 494 KEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKH 553

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           G+  D   L+ E    G+  D  +Y  LIG
Sbjct: 554 GNREDFDKLQSE---KGLVQDYGSYTSLIG 580



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 131/255 (51%), Gaps = 6/255 (2%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
             +I   C+ G+    + + ++M++KG  PDV+T+N L+N LCK+GDL +A  ++ EM++
Sbjct: 334 TTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQ 393

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               P+  TY   I G C+  +L+ AL +   M   GI  + V    L+   C++G + +
Sbjct: 394 RGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIE 453

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A + L E+L   +     D  T T+++  + K GD      L  +M        +V YNV
Sbjct: 454 AERTLREML---EAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV 510

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L+NG C  G + +A      ML  G +PD ITYN LL   CK G  ++   F  + S+ G
Sbjct: 511 LLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNRED---FDKLQSEKG 567

Query: 362 VAPDQISYKTIIQGL 376
           +  D  SY ++I  L
Sbjct: 568 LVQDYGSYTSLIGDL 582



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 98/226 (43%)

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           ++GK   +S F  VL   G     + +  ++      G    A +    + + ++    H
Sbjct: 132 RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFH 191

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
               + D   +    S A++  + +L  G   +V  FN L+    +   I +A  L  E+
Sbjct: 192 SCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI 251

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
              G+ P V ++N LI   C  G++    +L   M+   + PD+ TY+ LI G C  G +
Sbjct: 252 GKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQL 311

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            +A ++F ++   GL  + + F  L   +     +D   +I+Q+ L
Sbjct: 312 DDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQML 357


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 213/426 (50%), Gaps = 41/426 (9%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           C +  D   +  VI  LC   +   AL +  KM++ G  PDV+T + L+N  C+   +  
Sbjct: 98  CGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFG 157

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A  ++ +M EMR   +   YN  I G+C+   ++ AL LF  M  +G+R + VT+N LV 
Sbjct: 158 AVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVT 217

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            LC  G   DA + + +++  D      +VIT T L++++ + G   +A   + +M ++ 
Sbjct: 218 GLCCSGRRSDAARLMRDMVMRD---IVPNVITFTALINAFVREGKFLEAKKFYEEMIRRC 274

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           I  D+  YN +I+G C++G +  A      M+ +G  PDV+TYNTL+N  CK  ++DE +
Sbjct: 275 IDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGT 334

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                +S+ G+  D +++ TIIQG    G    A+E    M  +     P+I        
Sbjct: 335 KLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR-----PNI-------- 381

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
                    +SI    L +G+  N     AL+L E+           K EM L     D+
Sbjct: 382 -------RTYSI----LLYGLCYNWRVEKALVLFESMQ---------KSEMEL-----DI 416

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TYN++I   C +G++  A  L+  +  +G+ PD++TYT +I G C +    +A+ ++ K
Sbjct: 417 TTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRK 476

Query: 532 IQTLGL 537
           +Q  GL
Sbjct: 477 MQEDGL 482



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 204/423 (48%), Gaps = 6/423 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           MIQ   +P ++  + L++ + K  + +    +   M       +  TYN  I   CR + 
Sbjct: 60  MIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSR 119

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
              AL +   M   G  P+ VT + L++  C+   +  AV  + ++   ++ +   DV+ 
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKM---EEMRCKLDVVI 176

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              ++D + K G    AL L+  M +  ++ D V YN L+ G C +G  S A      M+
Sbjct: 177 YNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMV 236

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            R  +P+VIT+  L+N   ++GK  EA  FY  + +  + PD  +Y ++I GLC+HG + 
Sbjct: 237 MRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVD 296

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A++ L  M+ K   P+   +N +I+G+ +   +     +   M   G+  +  TFN +I
Sbjct: 297 EAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTII 356

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G    A  +   M   G  P++ TY++L+   C    +  AL L++ M +  + 
Sbjct: 357 QGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEME 413

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            DI TY  +I G C  GN+++A ++F  +   GL  D + +  +   + R +  DKA  +
Sbjct: 414 LDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFL 473

Query: 564 HQK 566
           ++K
Sbjct: 474 YRK 476



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 166/365 (45%), Gaps = 38/365 (10%)

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           +L++A  +   M + RP P+   ++  ++   +    D  + LF  M   GI  +  T+N
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           I+++ LC+                      +  VI                 AL++   M
Sbjct: 109 IVINCLCR---------------------CSRFVI-----------------ALSVVGKM 130

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            +   + D+V  + LINGFC    +  A     +M +     DV+ YNT+++  CK G +
Sbjct: 131 MKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLV 190

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           + A   +G + + GV  D ++Y +++ GLC  G    A   +  M+ + +VP    +  +
Sbjct: 191 NNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTAL 250

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I+ + R G    A    + M+   +  +VFT+N++I      G + +A  +   M+  G 
Sbjct: 251 INAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGC 310

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           FPDV TYN LI   C    +    +L  EM +RG+  D +T+  +I+G+   G    A+E
Sbjct: 311 FPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQE 370

Query: 528 VFAKI 532
           +F+++
Sbjct: 371 IFSRM 375



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 145/295 (49%), Gaps = 4/295 (1%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A+ L+ +M Q      IV ++ L++    + +     + F  M   G   D+ TYN ++
Sbjct: 52  EAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVI 111

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           NCLC+  +   A    G + K G  PD ++  ++I G C    +  A + +  M E    
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCK 171

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
            +  I+N IIDG+ + G ++NA  +   M   GV ++  T+N+L+      G   DA  L
Sbjct: 172 LDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARL 231

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            ++M++  I P+V T+  LI A    G    A + Y+EM+RR I PD+ TY  +I G C 
Sbjct: 232 MRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCM 291

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLL 569
            G + EA+++   + T G   D + +  L   + + K  D+     R++ Q+ L+
Sbjct: 292 HGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLV 346



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 41/255 (16%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  ++ D   + ++I  LC+ G++  A  +   M+ KG  PDV+T+N L+N  CK   +
Sbjct: 271 IRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRV 330

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++   ++REMS+     +  T+N  I GY +    D A  +FS M   G RPN  T++IL
Sbjct: 331 DEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSIL 387

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           ++ LC                                       N    +AL L+  M +
Sbjct: 388 LYGLC--------------------------------------YNWRVEKALVLFESMQK 409

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             ++ DI  YN++I+G C+ G++  A+  FC +  +G  PDV+TY T+++  C++   D+
Sbjct: 410 SEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDK 469

Query: 350 ASHFYGVLSKTGVAP 364
           A   Y  + + G+ P
Sbjct: 470 ADFLYRKMQEDGLLP 484



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 104/263 (39%), Gaps = 35/263 (13%)

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
           L+ ++  A   FC M++   LP ++ ++ LL+ + K    D     +  +   G+  D  
Sbjct: 46  LSMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLY 105

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y  +I  LC                                   RC     A S+   M
Sbjct: 106 TYNIVINCLC-----------------------------------RCSRFVIALSVVGKM 130

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           + FG   +V T ++LI    +G  +F A  L  +M       DV  YN +I   C  G +
Sbjct: 131 MKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLV 190

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + AL L+  M R G+  D +TY  L+ G C  G   +A  +   +    +  + I F  L
Sbjct: 191 NNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTAL 250

Query: 548 KKRYRRMKESDKARDIHQKWLLR 570
              + R  +  +A+  +++ + R
Sbjct: 251 INAFVREGKFLEAKKFYEEMIRR 273


>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
          Length = 648

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 223/456 (48%), Gaps = 32/456 (7%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  L  D   +  +I      G++  A  L  KMI++   PDV+T+N L++ LCK  ++
Sbjct: 56  LRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEM 115

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            K++ V+ +M +    PN  TYN+ I GY       +++ +F  M+++G+ P  V  N  
Sbjct: 116 VKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSF 175

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +HALC+   + +A      ++         ++I+ + L+  Y   G      +L N M  
Sbjct: 176 IHALCRHNRIKEAKDIFDSMVLKG---PKPNIISYSTLLHGYAAEGCFANMNSLVNLMVS 232

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K I  +   +N+LIN +   G +  A   F  M  +G +PD +T+ T+++ LC+ G+LD+
Sbjct: 233 KGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 292

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVI 407
           A H +  +   GV P +  Y+ +IQG C HG++VKA+E +  M+ K  +P P +  ++ I
Sbjct: 293 ALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKD-IPPPGVKYFSSI 351

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF----------- 456
           I+   + G ++    I DLM+  G   NV TFN+L+      G++ +A            
Sbjct: 352 INNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQLAL 411

Query: 457 ------------SLKK---EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
                       + KK   EM+  G    + TY +++G  C       A  L +++    
Sbjct: 412 NRIVTYMARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMN 471

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           +  DIIT+  +I      G  +EA+E+FA I T GL
Sbjct: 472 VKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGL 507



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 178/431 (41%), Gaps = 45/431 (10%)

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           H    +  + PS    +    +   C   EL  AL +F  +   G+ P+  ++N L+   
Sbjct: 17  HAPMRLLMLPPSTPTTSLIDVLPAECTGPEL--ALAVFGRLLRTGLGPDVCSYNTLIDGF 74

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K+G +  A +   +++   +   + DV+T   L+D   K  +  ++  +   M    I+
Sbjct: 75  SKEGEVDKAYELFYKMI---EQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIR 131

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +   YN LI G+   G    +   F +M   G +P V+  N+ ++ LC+  ++ EA   
Sbjct: 132 PNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDI 191

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  +   G  P+ ISY T++ G    G        +  M+ K +VP    +N++I+ Y R
Sbjct: 192 FDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYAR 251

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
           CG +  A  I + M + G+  +  TF  +I +  R G + DA      M+  G+ P    
Sbjct: 252 CGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAV 311

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGIT------------------------------ 503
           Y  LI   CN G +  A +L  EM+ + I                               
Sbjct: 312 YRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLM 371

Query: 504 ------PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL--AIDHIPFRIL--KKRYRR 553
                 P+++T+  L++G+C  GNM+EA         L L   + ++  R    KK +  
Sbjct: 372 VQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQLALNRIVTYMARRTTAAKKMFHE 431

Query: 554 MKESDKARDIH 564
           M ES     I 
Sbjct: 432 MIESGTTVSIQ 442



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 138/341 (40%), Gaps = 59/341 (17%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A+ +   M  KG +PD +T   +++ LC+IG L+ A H    M ++   P+ A Y
Sbjct: 253 GMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVY 312

Query: 192 NAFITGYCRVNELDKALHLFSTMAN----------------------------------- 216
              I G C   EL KA  L S M N                                   
Sbjct: 313 RCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMV 372

Query: 217 -NGIRPNRVTHNILVHALCKKGLLGDAVKFL--GEVLADD-------------------- 253
             G RPN VT N L+   C  G + +A+ +L     LA +                    
Sbjct: 373 QTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQLALNRIVTYMARRTTAAKKMFHEM 432

Query: 254 -DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
            +   T  + T  +++    +N    +A  L   +F  N++ DI+ +N++I+     G  
Sbjct: 433 IESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRR 492

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A   F  +   G +P V TYN +++ L K+   +EA + +  + K+G APD      I
Sbjct: 493 QEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHI 552

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           ++ L    ++ KA  +L  + E ++  E    +++   + R
Sbjct: 553 VRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSR 593


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 214/413 (51%), Gaps = 5/413 (1%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           TA+ L ++M  +G  P ++T + L+N  C +G +  A  V+  + +     N  T    +
Sbjct: 96  TAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIM 155

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   E+ KAL    ++   G   + VT+  L++ LCK GL  +A     E+L   +G
Sbjct: 156 KGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAF----ELLHKMEG 211

Query: 256 KAT-SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           +    +V+   +++D   K+G   +A  L++D+  + I  D+  Y  LI+GFC  G    
Sbjct: 212 QVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWRE 271

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
                C M+ R    +V TYN L++ LCK+G L +A     ++ + G  PD +++ T++ 
Sbjct: 272 VTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMS 331

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C++ D+V+AR+   +  E  + P+   +N++I GY +   +  A S+ + M    ++ 
Sbjct: 332 GYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAP 391

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           N+ T+++LI    + G I  A+ L   +   G  P+V TYN+++ A C +  +  A++L+
Sbjct: 392 NIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELF 451

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + M  RG+TP++ +Y  LI G+C    + EA  +F ++    L  D + +  L
Sbjct: 452 NLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCL 504



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 204/428 (47%), Gaps = 3/428 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +G A  +   ++++G   + +T   ++  LC  G++ KA      +       + 
Sbjct: 124 CHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDE 183

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TY   I G C++    +A  L   M    +RPN V +N++V  LCK GL+ +A     +
Sbjct: 184 VTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSD 243

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           V+         DV T T L+  +   G   +   L  DM  +N+  ++  YN+LI+  C 
Sbjct: 244 VVGRG---IDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCK 300

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G +  A      M++RG  PD++T+NTL++  C    + EA   +   ++ G+ PD  S
Sbjct: 301 KGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWS 360

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I G C +  I +A      M  K + P    ++ +IDG  + G +S A+ +   + 
Sbjct: 361 YNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIH 420

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G S NV T+N ++ A  +   +  A  L   M   G+ P+V +YN+LI   C    I 
Sbjct: 421 DGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRID 480

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A+ L++EM RR + PD +TY  LI G C  G +  A E+F  +   G  +D I + IL 
Sbjct: 481 EAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILF 540

Query: 549 KRYRRMKE 556
             + +++ 
Sbjct: 541 DAFSKIQH 548



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 190/395 (48%), Gaps = 3/395 (0%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           ++ A  +   +  M P P+   +N  +    ++     A+ L   M   GI P+ VT +I
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L++  C  G +G A   LG VL         + IT T +M     NG+  +AL   + + 
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRG---YQLNAITLTTIMKGLCINGEVRKALEFHDSVV 175

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            +    D V Y  LING C  G    AF    +M  +   P+V+ YN +++ LCK G + 
Sbjct: 176 AQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVT 235

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA   Y  +   G+ PD  +Y  +I G C  G   +    L  M++++V    + +N++I
Sbjct: 236 EARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILI 295

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           D   + G L  A  +R+LM+  G   ++ TFN L+        + +A  L       GI 
Sbjct: 296 DALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGIT 355

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PDV++YN+LI   C    I  AL L+++M  + + P+I+TY+ LI G C  G +  A E+
Sbjct: 356 PDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWEL 415

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           F+ I   G + + I + I+     +++  DKA ++
Sbjct: 416 FSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIEL 450



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 188/400 (47%), Gaps = 38/400 (9%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +++ LC+ G++  AL     ++ +G + D +T+  L+N LCKIG   +A  ++ +M   
Sbjct: 153 TIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQ 212

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP--------------------- 221
              PN   YN  + G C+   + +A  L+S +   GI P                     
Sbjct: 213 VVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREV 272

Query: 222 --------------NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
                         N  T+NIL+ ALCKKG+LG A       L  + G+   D++T   L
Sbjct: 273 TRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRN--LMIERGQ-RPDLVTFNTL 329

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           M  Y    D  +A  L++   +  I  D+ +YN+LI G+C N  I  A + F +M  +  
Sbjct: 330 MSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKL 389

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+++TY++L++ LCK G++  A   +  +   G +P+ I+Y  ++  LC    + KA E
Sbjct: 390 APNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIE 449

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M E+ + P    +N++I+GY +   +  A ++ + M    +  +  T+N LI    
Sbjct: 450 LFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLC 509

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           + G I  A+ L   M   G   DV TYN+L  A   + H+
Sbjct: 510 KSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 162/344 (47%), Gaps = 48/344 (13%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I   C  G+      L   M+ +    +V T+N L++ LCK G L KA 
Sbjct: 249 IDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAH 308

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M E    P+  T+N  ++GYC  N++ +A  LF T A  GI P+  ++NIL+   
Sbjct: 309 DMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGY 368

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   + +A                                      L+L+N M  K + 
Sbjct: 369 CKNNRIDEA--------------------------------------LSLFNKMNYKKLA 390

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +IV Y+ LI+G C +G IS A+  F  +   G  P+VITYN +L+ LCK   +D+A   
Sbjct: 391 PNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIEL 450

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           + ++ + G+ P+  SY  +I G C    I +A      M  +++VP+   +N +IDG  +
Sbjct: 451 FNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCK 510

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            G +S+A+ + ++M   G   +V T+N L          FDAFS
Sbjct: 511 SGRISHAWELFNVMHDGGPPVDVITYNIL----------FDAFS 544



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 106/233 (45%), Gaps = 38/233 (16%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
            C +  D   +  +I   C   +I  AL L  KM  K   P+++T++ L++ LCK G + 
Sbjct: 351 ECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRIS 410

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A  +   + +  PSPN  TYN  +   C++  +DKA+ LF+ M   G+ PN  ++NIL+
Sbjct: 411 YAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILI 470

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           +  CK   + +A+                                       L+ +M ++
Sbjct: 471 NGYCKSKRIDEAMN--------------------------------------LFEEMHRR 492

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           N+  D V YN LI+G C +G IS A+  F  M   G   DVITYN L +   K
Sbjct: 493 NLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSK 545



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 54/114 (47%)

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           +I DA +L   ++     P V  +N+++G+   + H   A+ L  +M  RGITP I+T +
Sbjct: 58  AIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLS 117

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
            LI  +C  G+M  A  V   +   G  ++ I    + K      E  KA + H
Sbjct: 118 ILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFH 171


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 213/447 (47%), Gaps = 42/447 (9%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + A+I   C  G+I  AL L R+M Q    PD+ TH  LV  LC  G  E+   ++
Sbjct: 198 DAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCML 253

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           ++M E+   P    Y A +  +CR  + ++A  + + M ++G+ P  VT  I+V+A C++
Sbjct: 254 QKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCRE 313

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G +  AV+    +          +V T   ++  +   G  ++A+AL + M +  ++ D+
Sbjct: 314 GRMSGAVRVFESMRFKG---CEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDV 370

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YN+LI G C++G I SAF     M   G   D  TYN L++ LCK GK+DEA   +  
Sbjct: 371 VTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           L   G+ P+ +++ T+I GLC  G    A  FL +M+     P+ + ++  I+       
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIEN------ 484

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
                                      L +T+G    +      EML   + P    Y +
Sbjct: 485 ---------------------------LCKTKGSQ--EGLFFIDEMLQKDVKPSTVNYTI 515

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +I    N  +  LA +++ +M+ +G +PD++TYT  ++ +C  G + EAE V  +++   
Sbjct: 516 VINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCR 575

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDI 563
             +D + +  L   +  + ++D+A  I
Sbjct: 576 TIVDAMAYNTLIDGHTSIGQTDRAVTI 602



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 184/432 (42%), Gaps = 38/432 (8%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   H A+++ LC  G+    L + +KM + G  P    +  LV+  C+    E+A+ 
Sbjct: 227 QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEK 286

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++ EM +    P   T    +  YCR   +  A+ +F +M   G  PN  T+N +V   C
Sbjct: 287 ILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFC 346

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G +  A+  L ++    +     DV+T  +L+     +G    A  L   M    +  
Sbjct: 347 NAGKVYKAMALLDQM---RECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAA 403

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D   YNVLI+  C  G +  A + F  +  RG  P+ +T+NT++N LCK GK D A  F 
Sbjct: 404 DQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFL 463

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G APD  +Y   I+ LC      +   F+  ML+K V P    + ++I+     
Sbjct: 464 ENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVIN----- 518

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
                 F+ R+    +G+++ ++                       +M+  G  PDV TY
Sbjct: 519 ----RLFNERN----YGLATRIW----------------------GQMVSQGCSPDVVTY 548

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
              + A CN G +  A  +  EM +     D + Y  LI GH + G    A  +   +  
Sbjct: 549 TTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTG 608

Query: 535 LGLAIDHIPFRI 546
           +    +H  F I
Sbjct: 609 VASMPNHFTFFI 620



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 166/366 (45%), Gaps = 14/366 (3%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P+P  ATYNA I   CR  +L  A    S M  +G RP+  T N L+   C+   L  A 
Sbjct: 125 PAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAH 184

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               ++        + D ++   L++ + + G   +AL L+ +M     Q D+  +  L+
Sbjct: 185 DLFCKMPFRG---FSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDMYTHAALV 237

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C  G          +M + G+ P    Y  L++  C++ K +EA      +  +G+ 
Sbjct: 238 KGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLM 297

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW--NVIIDGYGRCGDLSNAF 421
           P  ++   ++   C  G +  A     SM  K    EP++W  N I+ G+   G +  A 
Sbjct: 298 PCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGC--EPNVWTYNAIVQGFCNAGKVYKAM 355

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           ++ D M   GV  +V T+N LI  +   G I  AF L + M  +G+  D +TYN+LI A 
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDAL 415

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID- 540
           C  G +  A  L+D +  RGI P+ +T+  +I G C  G    A      + + G A D 
Sbjct: 416 CKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDT 475

Query: 541 --HIPF 544
             + PF
Sbjct: 476 YTYSPF 481



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 131/555 (23%), Positives = 215/555 (38%), Gaps = 94/555 (16%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L  L+ M++ G    T     R + A++   C   K   A  +  +M   G +P V+
Sbjct: 247 EEGLCMLQKMKELGWRPTT-----RAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T   +VN  C+ G +  A  V   M      PN  TYNA + G+C   ++ KA+ L   M
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM 361

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G+ P+ VT+N+L+   C  G +G A + L   L + +G A +D  T  +L+D+  K 
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLR--LMEGNGLA-ADQYTYNVLIDALCKT 418

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +A +L++ +  + I+ + V +N +ING C  G    A  +   M+  G+ PD  TY
Sbjct: 419 GKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTY 478

Query: 335 NTLLNCLCKQGKLDE-----------------------------------ASHFYGVLSK 359
           +  +  LCK     E                                   A+  +G +  
Sbjct: 479 SPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVS 538

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G +PD ++Y T ++  C  G + +A   +  M +   + +   +N +IDG+   G    
Sbjct: 539 QGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDR 598

Query: 420 AFSIRDLMLSFGVSSNVFTF-------------------NALILAETRGGSIFDAFSLKK 460
           A +I   M       N FTF                      +        +F+ F L K
Sbjct: 599 AVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMK 658

Query: 461 --------------------EMLLDGIFPDVF------------TYNLLIGASCNLGHIH 488
                               E  LD +   V              YN L+   C L    
Sbjct: 659 KNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYS 718

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A  L   M+  G  P++I Y  L+ G  A G    A+E+F   +      D I ++++ 
Sbjct: 719 DAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVII 778

Query: 549 KRYRRMKESDKARDI 563
             + R   +D   D+
Sbjct: 779 DGFIRKGHADMCHDM 793



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 47/98 (47%)

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P   TYN LI A C    +  A +    M+R G  PD  T+  LI G+C    ++ A ++
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           F K+   G + D + +  L + +      D+A ++ ++
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFRE 224


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 199/398 (50%), Gaps = 3/398 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR     G++ +A+ + R+M  KG+ PD  T+ +LVN L K G +++A      M E  
Sbjct: 106 LIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERG 165

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN  TYN  +  + +V +LD AL LF+ M   G +P+ VT+NIL+ ALC  G +G A 
Sbjct: 166 LTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAAR 225

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K   ++  D     + D  T + L++   K+G   +A  ++ +M  + +  D+V YN L+
Sbjct: 226 KLFHKMTGDG---CSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLL 282

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
                 G++   +    +M ++GF PD  ++NT+++ L K  K D A   +  + ++G  
Sbjct: 283 ATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCK 342

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ISY  +I      GD  +AR+ L  M+E   +PE   +N +I      G +  AF++
Sbjct: 343 PDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAV 402

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M + G   +V T+N L+    + G    A  L ++M   G+ PD  +Y + I     
Sbjct: 403 LEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAF 462

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
              +  AL L+ +M   G   D   Y  LI+     G+
Sbjct: 463 DDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGD 500



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 199/427 (46%), Gaps = 3/427 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+   A  + +K++QKG   D   +N L+    + G L+ A  + REM      P+  TY
Sbjct: 79  GEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTY 138

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              +    +   + +A   F  M   G+ PN  T+N+L+ A  K G L  A+    E+  
Sbjct: 139 GFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEM-- 196

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
              G   S V+T  IL+D+    G    A  L++ M       D   Y+ L+NG   +G 
Sbjct: 197 KRRGFQPS-VVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGR 255

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F +M+ RG   D++ YN+LL  L K G +D        +S+ G  PD  S+ T
Sbjct: 256 VEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNT 315

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           I+  L        ARE    M+E    P+   +N++ID Y R GD + A  + + M+  G
Sbjct: 316 IMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAG 375

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
                 T+N+LI      G + +AF++ +EM   G  PDV TYN L+      G    A 
Sbjct: 376 FIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAA 435

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +L+ +M  +G+ PD ++Y   I G      + EA  +F  ++ +G  +D   +RIL +  
Sbjct: 436 RLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAA 495

Query: 552 RRMKESD 558
            R  +++
Sbjct: 496 HRAGDTE 502



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 209/482 (43%), Gaps = 50/482 (10%)

Query: 85  AVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKM 144
            + + L+ +LKE +   + +R    V+  L T Y R          G K G A  L  + 
Sbjct: 9   GILDPLETLLKEMVAEGRPLRPNTLVK--LITAYGR----------GNKSGDAFDLFNQA 56

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
                 P V     L++ L   G+ E+A+ V +++ +     +   YN  I  + R  +L
Sbjct: 57  ESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQL 116

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D A+ +F  M   G  P+  T+  LV+AL K G + +A  F                   
Sbjct: 117 DSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSF------------------- 157

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
                              ++ M ++ +  +I  YN+L++ F   G +  A   F +M +
Sbjct: 158 -------------------FDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKR 198

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           RGF P V+TYN LL+ LC  G++  A   +  ++  G +PD  +Y T++ GL   G + +
Sbjct: 199 RGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEE 258

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A +    M+++ V  +   +N ++    + G++   + +   M   G   + F+FN ++ 
Sbjct: 259 AHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMD 318

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A  +      A  +   M+  G  PD+ +YN+LI +    G    A Q+ +EM+  G  P
Sbjct: 319 ALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIP 378

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
           +  TY  LI      G + EA  V  +++T G   D + +  L     +  E+ +A  + 
Sbjct: 379 ETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLF 438

Query: 565 QK 566
           Q+
Sbjct: 439 QQ 440



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 136/296 (45%), Gaps = 3/296 (1%)

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K+GD F    L+N          + A+  LI+    +G+   A   + +++++G   D  
Sbjct: 45  KSGDAFD---LFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRF 101

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            YN L+    + G+LD A   +  +   G  PD+ +Y  ++  L   G + +AR F  +M
Sbjct: 102 AYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM 161

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           LE+ + P    +N+++D + + G L  A  +   M   G   +V T+N L+ A    G +
Sbjct: 162 LERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRV 221

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             A  L  +M  DG  PD +TY+ L+      G +  A +++ EM+ RG+  D++ Y  L
Sbjct: 222 GAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSL 281

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +      GNM    ++  ++   G   D   F  +     +  + D AR++  + +
Sbjct: 282 LATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMV 337


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 223/445 (50%), Gaps = 30/445 (6%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+  C   K+  AL    K+ + G  P ++T N L++ LC    + +A  +  +M +  
Sbjct: 21  LIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK-- 78

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T+   + G CR   + +A+ L   M  +G++PN++T+  +V  +CK G    A+
Sbjct: 79  --PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++  ++      DV+  + ++D  +K+G    A  L+ +M  K I  DIV Y+ +I
Sbjct: 137 NLLRKM--EELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMI 194

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NGFC +G  S A     +ML R   PDV+T++ L+N L K+G L+ A      +  +GV 
Sbjct: 195 NGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVC 254

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++  T++ GLC  G +  A E   +M +KS++                 D ++AF+ 
Sbjct: 255 PNVVTCNTLLDGLCDSGKLKDALEMFKAM-QKSMMDI---------------DATHAFN- 297

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
                  GV  +V T+N LI      G   +A  L +EM   GI PD  TY+ +I   C 
Sbjct: 298 -------GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCK 350

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              +  A Q++D M  +  +P+I+T+  LI G+C  G + +  E+F ++   G+  + I 
Sbjct: 351 QSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT 410

Query: 544 FRILKKRYRRMKESDKARDIHQKWL 568
           +  L + +R++   + + DI Q+ +
Sbjct: 411 YITLIRGFRKVGNINGSLDIFQEMI 435



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 213/431 (49%), Gaps = 22/431 (5%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC+  ++  AL L  +M +    P+V+T   L+N LC+ G + +A  ++  M E 
Sbjct: 55  TLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVED 110

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMAN-NGIRPNRVTHNILVHALCKKGLLGD 241
              PN  TY   + G C++ +   AL+L   M   + I+P+ V ++ ++  L K G   D
Sbjct: 111 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTD 170

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A     E+    D     D++T + +++ +  +G   +A  L  +M  + I  D+V ++ 
Sbjct: 171 AQNLFIEM---QDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSG 227

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT- 360
           LIN     GD++SA     +M+  G  P+V+T NTLL+ LC  GKL +A   +  + K+ 
Sbjct: 228 LINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSM 287

Query: 361 ----------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                     GV PD  +Y  +I GL   G  ++A E    M  + +VP+   ++ +I+G
Sbjct: 288 MDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMING 347

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             +   L  A  + D M S   S N+ TFN LI    + G + D   L  EM   GI  +
Sbjct: 348 LCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVAN 407

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             TY  LI     +G+I+ +L ++ EM+  G+ PD IT   ++ G  ++  +K A    A
Sbjct: 408 AITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA---LA 464

Query: 531 KIQTLGLAIDH 541
            ++ L +++DH
Sbjct: 465 MLEELQMSMDH 475



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 144/295 (48%), Gaps = 8/295 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   + A+I  L   G+   A  L  +M  KG  PD++T++ ++N  C  G   +A 
Sbjct: 148 IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQ 207

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +++EM   + SP+  T++  I    +  +L+ A  L   M ++G+ PN VT N L+  L
Sbjct: 208 RLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGL 267

Query: 234 CKKGLLGDAV---KFLGEVLADDDGK-----ATSDVITSTILMDSYFKNGDKFQALALWN 285
           C  G L DA+   K + + + D D          DV T  IL+      G   +A  L+ 
Sbjct: 268 CDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYE 327

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
           +M  + I  D V Y+ +ING C    +  A   F  M  + F P+++T+NTL+   CK G
Sbjct: 328 EMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAG 387

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
            +D+    +  + + G+  + I+Y T+I+G    G+I  + +    M+   V P+
Sbjct: 388 MVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPD 442



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 135/248 (54%), Gaps = 5/248 (2%)

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            I  DI ++N+LI  FC    +  A + F ++ K GF P ++T+NTLL+ LC + ++ EA
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +  + K    P+ +++ T++ GLC  G +V+A   L  M+E  + P    +  I+DG
Sbjct: 70  LDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 411 YGRCGDLSNAFSIRDLMLSFG-VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
             + GD  +A ++   M     +  +V  ++A+I    + G   DA +L  EM   GIFP
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D+ TY+ +I   C+ G    A +L  EML R I+PD++T++ LI      G++  A+++ 
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245

Query: 530 AKIQTLGL 537
            ++ + G+
Sbjct: 246 QEMISSGV 253



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 9/200 (4%)

Query: 94  LKENLDRLKTMR------DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           LK+ L+  K M+      D       +E D + +  +I  L   GK   A  L  +M  +
Sbjct: 273 LKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 332

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VPD +T++ ++N LCK   L++A  +   M     SPN  T+N  ITGYC+   +D  
Sbjct: 333 GIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDG 392

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           L LF  M   GI  N +T+  L+    K G +  ++    E+++        D IT   +
Sbjct: 393 LELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISS---GVYPDTITIRNM 449

Query: 268 MDSYFKNGDKFQALALWNDM 287
           +   +   +  +ALA+  ++
Sbjct: 450 LTGLWSKEELKRALAMLEEL 469


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 223/445 (50%), Gaps = 30/445 (6%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+  C   K+  AL    K+ + G  P ++T N L++ LC    + +A  +  +M +  
Sbjct: 21  LIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK-- 78

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T+   + G CR   + +A+ L   M  +G++PN++T+  +V  +CK G    A+
Sbjct: 79  --PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 136

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++  ++      DV+  + ++D  +K+G    A  L+ +M  K I  DIV Y+ +I
Sbjct: 137 NLLRKM--EELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMI 194

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NGFC +G  S A     +ML R   PDV+T++ L+N L K+G L+ A      +  +GV 
Sbjct: 195 NGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVC 254

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++  T++ GLC  G +  A E   +M +KS++                 D ++AF+ 
Sbjct: 255 PNVVTCNTLLDGLCDSGKLKDALEMFKAM-QKSMMDI---------------DATHAFN- 297

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
                  GV  +V T+N LI      G   +A  L +EM   GI PD  TY+ +I   C 
Sbjct: 298 -------GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCK 350

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              +  A Q++D M  +  +P+I+T+  LI G+C  G + +  E+F ++   G+  + I 
Sbjct: 351 QSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT 410

Query: 544 FRILKKRYRRMKESDKARDIHQKWL 568
           +  L + +R++   + + DI Q+ +
Sbjct: 411 YITLIRGFRKVGNINGSLDIFQEMI 435



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 214/431 (49%), Gaps = 22/431 (5%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC+  ++  AL L  +M +    P+V+T   L+N LC+ G + +A  ++  M E 
Sbjct: 55  TLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVED 110

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMAN-NGIRPNRVTHNILVHALCKKGLLGD 241
              PN  TY   + G C++ +   AL+L   M   + I+P+ V ++ ++  L K G   D
Sbjct: 111 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTD 170

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A     E+    D     D++T + +++ +  +G   +A  L  +M  + I  D+V ++ 
Sbjct: 171 AQNLFIEM---QDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSG 227

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT- 360
           LIN     GD++SA     +M+  G  P+V+T NTLL+ LC  GKL +A   +  + K+ 
Sbjct: 228 LINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSM 287

Query: 361 ----------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                     GV PD  +Y  +I GL   G  ++A E    M  + +VP+   ++ +I+G
Sbjct: 288 MDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMING 347

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             +   L  A  + D M S   S N+ TFN LI    + G + D   L  EM   GI  +
Sbjct: 348 LCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVAN 407

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             TY  LI     +G+I+ +L ++ EM+  G+ PD IT   ++ G  ++  +K+A    A
Sbjct: 408 AITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKA---LA 464

Query: 531 KIQTLGLAIDH 541
            ++ L +++DH
Sbjct: 465 MLEELQMSMDH 475



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 144/295 (48%), Gaps = 8/295 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   + A+I  L   G+   A  L  +M  KG  PD++T++ ++N  C  G   +A 
Sbjct: 148 IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQ 207

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +++EM   + SP+  T++  I    +  +L+ A  L   M ++G+ PN VT N L+  L
Sbjct: 208 RLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGL 267

Query: 234 CKKGLLGDAV---KFLGEVLADDDGK-----ATSDVITSTILMDSYFKNGDKFQALALWN 285
           C  G L DA+   K + + + D D          DV T  IL+      G   +A  L+ 
Sbjct: 268 CDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYE 327

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
           +M  + I  D V Y+ +ING C    +  A   F  M  + F P+++T+NTL+   CK G
Sbjct: 328 EMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAG 387

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
            +D+    +  + + G+  + I+Y T+I+G    G+I  + +    M+   V P+
Sbjct: 388 MVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPD 442



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 135/248 (54%), Gaps = 5/248 (2%)

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            I  DI ++N+LI  FC    +  A + F ++ K GF P ++T+NTLL+ LC + ++ EA
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +  + K    P+ +++ T++ GLC  G +V+A   L  M+E  + P    +  I+DG
Sbjct: 70  LDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 411 YGRCGDLSNAFSIRDLMLSFG-VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
             + GD  +A ++   M     +  +V  ++A+I    + G   DA +L  EM   GIFP
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D+ TY+ +I   C+ G    A +L  EML R I+PD++T++ LI      G++  A+++ 
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245

Query: 530 AKIQTLGL 537
            ++ + G+
Sbjct: 246 QEMISSGV 253



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 9/200 (4%)

Query: 94  LKENLDRLKTMR------DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           LK+ L+  K M+      D       +E D + +  +I  L   GK   A  L  +M  +
Sbjct: 273 LKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 332

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VPD +T++ ++N LCK   L++A  +   M     SPN  T+N  ITGYC+   +D  
Sbjct: 333 GIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDG 392

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           L LF  M   GI  N +T+  L+    K G +  ++    E+++        D IT   +
Sbjct: 393 LELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSG---VYPDTITIRNM 449

Query: 268 MDSYFKNGDKFQALALWNDM 287
           +   +   +  +ALA+  ++
Sbjct: 450 LTGLWSKEELKKALAMLEEL 469


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 211/447 (47%), Gaps = 21/447 (4%)

Query: 120 RHVAVIRDLCL-----------GGKIG--TALWLRRKMIQKGTVPDVLTHNYLVNELCKI 166
           R V+   D CL            G +G   AL L  +++       V   N L+  + + 
Sbjct: 3   RRVSAAADRCLELERVIASRARSGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRA 62

Query: 167 GDLEKADHVIREMSEM------RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           G    ++ V+   + M      + +PN  TY+  I  +CR+  L+     F  +   G R
Sbjct: 63  GCSSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWR 122

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
            N +  + L+  LC    + +A   L  +L   +     DV+    +++ +F+ G   +A
Sbjct: 123 VNVIVISQLLKGLCDAKRVDEATDIL--LLRMSEFGCPPDVVAYNTVINGFFREGQVEKA 180

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
             L+ +M  + I  ++V Y  +I+G C    +  A   F QM+ RG  PD  TYN L++ 
Sbjct: 181 YNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHG 240

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
               GK  E       +S  G+ PD I+Y  ++  LC +G   +AR F  SM  K + P+
Sbjct: 241 YLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPD 300

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
             I+ +++ GY   G LS   S  DLM+  GVS N   FN +  A  +   I +A  +  
Sbjct: 301 VAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFN 360

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           +M   G+ PDV ++  LI A C LG +  A+  +++M+  G+TP+I  ++ L+ G C  G
Sbjct: 361 KMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVG 420

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             ++AEE+F ++   G+ +D + F  L
Sbjct: 421 KWEKAEELFFEVLDQGICVDAVFFNTL 447



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 230/509 (45%), Gaps = 78/509 (15%)

Query: 114 LETDYRRHVAVI----RDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           L+T +R +V VI    + LC   ++  A   L  +M + G  PDV+ +N ++N   + G 
Sbjct: 117 LKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQ 176

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           +EKA ++  EM +    PN  TY   I G C+   +D+A  +F  M + G++P+  T+N 
Sbjct: 177 VEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNC 236

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L+H     G   + V+ L E+          D IT  +L+D   KNG   +A   ++ MF
Sbjct: 237 LIHGYLSTGKWKEVVQMLEEM---STHGLEPDCITYALLLDYLCKNGRCREARLFFDSMF 293

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAY-------------------FC--------- 320
           +K I+ D+  Y +L++G+   G +S   ++                   FC         
Sbjct: 294 RKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIE 353

Query: 321 -------QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
                  +M ++G  PDV+++  L++ LCK G++D+A   +  +   GV P+   + +++
Sbjct: 354 EAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLV 413

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVV----------------------------------- 398
            GLC  G   KA E    +L++ +                                    
Sbjct: 414 YGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVR 473

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P    +N ++ G+   G +  A  + D+M+S G+  N FT+  L+    +   + DA+SL
Sbjct: 474 PNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSL 533

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            +EML+ G+ P V TYN ++      G    A +LY  M+      DI TY  ++ G C 
Sbjct: 534 FREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCK 593

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
              + EA ++F ++ +    +D + F I+
Sbjct: 594 NNFVDEAFKMFRRLCSKDPQLDSVTFNIM 622



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 207/428 (48%), Gaps = 4/428 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +++ G   +V+  + L+  LC    +++A D ++  MSE    P+   YN  I G+ R  
Sbjct: 116 ILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREG 175

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +++KA +LF  M + GI PN VT+  ++  LCK  ++  A     +++   D     D  
Sbjct: 176 QVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMI---DRGVKPDNG 232

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   L+  Y   G   + + +  +M    ++ D + Y +L++  C NG    A  +F  M
Sbjct: 233 TYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSM 292

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            ++G  PDV  Y  LL+    +G L E   F  ++   GV+P++  +  +         I
Sbjct: 293 FRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMI 352

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A      M ++ + P+   +  +ID   + G + +A    + M++ GV+ N+F F++L
Sbjct: 353 EEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSL 412

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +      G    A  L  E+L  GI  D   +N L+   CN G +  A +L D M+R G+
Sbjct: 413 VYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGV 472

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            P++I+Y  L+ GHC  G + EA ++   + + GL  +   + IL + Y + +  D A  
Sbjct: 473 RPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYS 532

Query: 563 IHQKWLLR 570
           + ++ L++
Sbjct: 533 LFREMLMK 540



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 198/418 (47%), Gaps = 3/418 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK    + +  +M   G  PD +T+  L++ LCK G   +A      M      P+ A Y
Sbjct: 245 GKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIY 304

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              + GY     L +       M  NG+ PNR   NI+  A  KK ++ +A+    ++  
Sbjct: 305 AILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQ 364

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                 + DV++   L+D+  K G    A+  +N M  + +  +I  ++ L+ G C  G 
Sbjct: 365 QG---LSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGK 421

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A   F ++L +G   D + +NTL+  LC +G++ EA     ++ + GV P+ ISY T
Sbjct: 422 WEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNT 481

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++ G C+ G I +A + L  M+   + P    + +++ GY +   + +A+S+   ML  G
Sbjct: 482 LVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKG 541

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           V+  V T+N ++    + G   +A  L   M+      D++TYN+++   C    +  A 
Sbjct: 542 VTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAF 601

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           +++  +  +    D +T+  +I      G  ++A ++FA I   GL  D + +R++ +
Sbjct: 602 KMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAE 659



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 210/456 (46%), Gaps = 8/456 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           KE +  L+ M   G     LE D   +  ++  LC  G+   A      M +KG  PDV 
Sbjct: 248 KEVVQMLEEMSTHG-----LEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVA 302

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
            +  L++     G L +    +  M     SPN   +N     Y +   +++A+H+F+ M
Sbjct: 303 IYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKM 362

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G+ P+ V+   L+ ALCK G + DAV    +++ +     T ++   + L+      
Sbjct: 363 RQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEG---VTPNIFVFSSLVYGLCTV 419

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +A  L+ ++  + I  D V +N L+   C  G +  A      M++ G  P+VI+Y
Sbjct: 420 GKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISY 479

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           NTL+   C  G++DEA+    V+   G+ P++ +Y  +++G C    +  A      ML 
Sbjct: 480 NTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLM 539

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           K V P    +N I+ G  + G  S A  +   M++     +++T+N ++    +   + +
Sbjct: 540 KGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDE 599

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           AF + + +       D  T+N++IGA    G    A+ L+  +   G+ PD++TY  + +
Sbjct: 600 AFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAE 659

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
                G++ E + +F+ ++  G A +      L +R
Sbjct: 660 NLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRR 695



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 190/424 (44%), Gaps = 3/424 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G  P+    N +     K   +E+A H+  +M +   SP+  ++ A I   C++  
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A+  F+ M N G+ PN    + LV+ LC  G    A +   EVL  D G     V  
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVL--DQGICVDAVFF 444

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           +T LM +    G   +A  L + M +  ++ ++++YN L+ G CL G I  A      M+
Sbjct: 445 NT-LMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMV 503

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  P+  TY  LL   CK  ++D+A   +  +   GV P   +Y TI+ GL   G   
Sbjct: 504 SNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFS 563

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A E  L+M+      + + +N+I++G  +   +  AF +   + S     +  TFN +I
Sbjct: 564 EANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMI 623

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            A  +GG   DA  L   +   G+ PDV TY L+       G +     L+  M + G  
Sbjct: 624 GALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTA 683

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P+      L++    RG++  A     K+     +++     +L   Y R +    A+ +
Sbjct: 684 PNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQPHAKSL 743

Query: 564 HQKW 567
            +K+
Sbjct: 744 PEKY 747



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 160/366 (43%), Gaps = 49/366 (13%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +++E +     MR  G     L  D     A+I  LC  G++  A+    +MI +G  P+
Sbjct: 351 MIEEAMHIFNKMRQQG-----LSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPN 405

Query: 153 VLTHNYLVNELCKIGDLEKADHVIRE---------------------------------- 178
           +   + LV  LC +G  EKA+ +  E                                  
Sbjct: 406 IFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLID 465

Query: 179 -MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
            M  +   PN  +YN  + G+C    +D+A  L   M +NG++PN  T+ IL+   CK  
Sbjct: 466 LMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKAR 525

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            + DA     E+L       T  V T   ++   F+ G   +A  L+ +M     + DI 
Sbjct: 526 RVDDAYSLFREMLMKG---VTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIY 582

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            YN+++NG C N  +  AF  F ++  +    D +T+N ++  L K G+ ++A   +  +
Sbjct: 583 TYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATI 642

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREF--LLSMLEKS-VVPEPHIWNVIIDGYGRC 414
           S  G+ PD ++Y+ I + L   G +    EF  L S +EKS   P  H+ N ++      
Sbjct: 643 SAYGLVPDVVTYRLIAENLIEEGSL---GEFDGLFSAMEKSGTAPNSHMLNALVRRLLHR 699

Query: 415 GDLSNA 420
           GD+S A
Sbjct: 700 GDISRA 705



 Score = 43.1 bits (100), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 4/153 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC    +  A  + R++  K    D +T N ++  L K G  E A  +   +S   
Sbjct: 587 ILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYG 646

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY            L +   LFS M  +G  PN    N LV  L  +G +  A 
Sbjct: 647 LVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRA- 705

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
              G  L   D K  S   ++T ++ S +  G+
Sbjct: 706 ---GVYLYKLDEKNFSLEASTTSMLISLYSRGE 735


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 185/386 (47%), Gaps = 38/386 (9%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +++  G  P+    N L+ ++ + G L  A ++  EM      P   T+N  ++G C+ +
Sbjct: 234 QLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKAS 293

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +L+ A  L   MA  G+ P+  T+   +  LCK G + DAV+   E+    +     + +
Sbjct: 294 DLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEM---RERGVNPNTV 350

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             T L+D++ K G+    L L  +M  + I+TD+VAYN L NG C   D+ +A     +M
Sbjct: 351 VFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEM 410

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
              G  PD +TY TL++  CK+G+LD A      +S  GVA D+++Y T+I GL   G  
Sbjct: 411 RNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRS 470

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
           V +   L  M+E  + P+   + ++ID + +  D+                         
Sbjct: 471 VDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTG---------------------- 508

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
                        F L KEM   G  P V TYN+++   C LG +  A  L + ML  G+
Sbjct: 509 -------------FKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGV 555

Query: 503 TPDIITYTELIKGHCARGNMKEAEEV 528
            PD ITY  L+ GHC  G +++AEE+
Sbjct: 556 CPDDITYNILLDGHCKHGKVRDAEEL 581



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 171/355 (48%), Gaps = 6/355 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++RD+   GK+ +A  +  +M+++G  P V+T N L++ +CK  DL  A+ +   M++  
Sbjct: 250 LMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAG 309

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  TY AF+ G C+   +  A+ +F  M   G+ PN V    L+ A CK+G +   +
Sbjct: 310 VAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGL 369

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+         +D++    L +   +  D   A  +  +M    ++ D V Y  LI
Sbjct: 370 ELHREMATRG---IKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLI 426

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GFC  G++  A     +M   G   D +TY TL++ L K G+  ++      + + G+ 
Sbjct: 427 DGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLE 486

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y  +I   C + D+    + L  M  K   P    +NV+++G+   G + NA  +
Sbjct: 487 PDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADML 546

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            + ML+ GV  +  T+N L+    + G + DA  LK      G+  D   Y  LI
Sbjct: 547 LNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKSA---KGMVSDFGLYTSLI 598



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 140/279 (50%), Gaps = 3/279 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
            +  +  D   + A ++ LC  G+I  A+ +  +M ++G  P+ +    L++  CK G++
Sbjct: 306 AKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNV 365

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
                + REM+      +   YNA   G CRV +L  A  +   M NNG++P++VT+  L
Sbjct: 366 AAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTL 425

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +   CK+G L  A++   E+   D+G A  D +T T L+    K+G    +  +  +M +
Sbjct: 426 IDGFCKEGELDMAMEMKQEM--SDEGVAL-DEVTYTTLISGLSKSGRSVDSERILCEMME 482

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             ++ D   Y ++I+ FC N D+ + F    +M  +G  P V+TYN ++N  C  G++  
Sbjct: 483 AGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKN 542

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           A      +   GV PD I+Y  ++ G C HG +  A E 
Sbjct: 543 ADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEEL 581



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 159/348 (45%), Gaps = 3/348 (0%)

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R+  + +A   +  + + G+ P     N+L+  + + G L  A     E+L         
Sbjct: 221 RLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRG---VPP 277

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
            V+T   LM    K  D   A AL   M +  +  D+  Y   + G C  G I  A   F
Sbjct: 278 TVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMF 337

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M +RG  P+ + + TL++  CK+G +      +  ++  G+  D ++Y  +  GLC  
Sbjct: 338 EEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRV 397

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
            D+  A + +  M    + P+   +  +IDG+ + G+L  A  ++  M   GV+ +  T+
Sbjct: 398 RDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTY 457

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
             LI   ++ G   D+  +  EM+  G+ PD  TY ++I A C    +    +L  EM  
Sbjct: 458 TTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQN 517

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +G  P ++TY  ++ G C  G MK A+ +   +  +G+  D I + IL
Sbjct: 518 KGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNIL 565



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 121/243 (49%), Gaps = 3/243 (1%)

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           +RG    +  ++ L+N L     + EA  FY  L   GV P+   +  +++ +   G + 
Sbjct: 205 RRGVRVPLPAWSDLMNRLPS---VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLA 261

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            AR     ML + V P    +N ++ G  +  DL++A ++R LM   GV+ +V+T+ A +
Sbjct: 262 SARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFM 321

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G I DA  + +EM   G+ P+   +  LI A C  G++   L+L+ EM  RGI 
Sbjct: 322 QGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIK 381

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            D++ Y  L  G C   ++K A ++  +++  GL  D + +  L   + +  E D A ++
Sbjct: 382 TDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEM 441

Query: 564 HQK 566
            Q+
Sbjct: 442 KQE 444



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 113/260 (43%), Gaps = 41/260 (15%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++TD   + A+   LC    +  A  +  +M   G  PD +T+  L++  CK G+L+ A 
Sbjct: 380 IKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAM 439

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + +EMS+   + +  TY   I+G  +      +  +   M   G+ P+  T+ +++ A 
Sbjct: 440 EMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAF 499

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK                       SDV T        FK         L  +M  K  +
Sbjct: 500 CK----------------------NSDVKTG-------FK---------LLKEMQNKGRK 521

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             +V YNV++NGFC+ G + +A      ML  G  PD ITYN LL+  CK GK+ +A   
Sbjct: 522 PGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEEL 581

Query: 354 YGVLSKTGVAPDQISYKTII 373
               S  G+  D   Y ++I
Sbjct: 582 K---SAKGMVSDFGLYTSLI 598



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 11/213 (5%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           LK   D ++ MR+ G     L+ D   +  +I   C  G++  A+ ++++M  +G   D 
Sbjct: 400 LKAANDIVEEMRNNG-----LKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDE 454

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+  L++ L K G    ++ ++ EM E    P+  TY   I  +C+ +++     L   
Sbjct: 455 VTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKE 514

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M N G +P  VT+N++++  C  G + +A   L  +L   +     D IT  IL+D + K
Sbjct: 515 MQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAML---NIGVCPDDITYNILLDGHCK 571

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
           +G    A  L +    K + +D   Y  LIN F
Sbjct: 572 HGKVRDAEELKS---AKGMVSDFGLYTSLINEF 601


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 213/470 (45%), Gaps = 42/470 (8%)

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           R LC  G+   AL L R M + G VPD + +  +++ LC  G + +A  ++ EM  M  +
Sbjct: 183 RALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCA 242

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
            +  T++  + G C +  + +A  L   M   G  P  +T+  L+  LC+     +A   
Sbjct: 243 ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAM 302

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           LG V          +V+    ++      G   +A  L+  M  K  Q D   Y++L++G
Sbjct: 303 LGRV-------PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHG 355

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITY------------------------------- 334
            C  G ISSA     +M K+GF P+V+TY                               
Sbjct: 356 LCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLN 415

Query: 335 ----NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
               N ++  LCK G++DEA      +   G  PD  SY TII  LC +  + +A     
Sbjct: 416 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE 475

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
           ++LE+ VV     +N II    R G   +A  +   M+  G S +V ++N LI A  + G
Sbjct: 476 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG 535

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           ++  +  L +EM   GI P+  +YN+LI   C    +  AL+L  +ML +G+ PDI+TY 
Sbjct: 536 NVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 595

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            LI G C  G M  A  +  K+    +  D I + IL   + +++  D A
Sbjct: 596 TLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 645



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 189/417 (45%), Gaps = 9/417 (2%)

Query: 135 GTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM-RPSPNCATYN 192
           G AL L  ++ ++ G  P   ++N +++ L +      A  + R M    R  P   T+ 
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFG 179

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
                 CR+   ++AL L   MA +G  P+ V +  ++HALC +G + +A   L E+L  
Sbjct: 180 VAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLM 239

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                 +DV T   ++      G   +A  L + M  K     ++ Y  L+ G C     
Sbjct: 240 G---CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A A    ML R    +V+ +NT++     +GKL EA+  Y  +   G  PD  +Y  +
Sbjct: 297 DEARA----MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 352

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           + GLC  G I  A   L  M +K   P    + +++  + + G   +  ++ + M + G+
Sbjct: 353 MHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 412

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           + N   +N +I A  + G + +A  L +EM   G  PD+ +YN +I   CN   +  A  
Sbjct: 413 TLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 472

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           +++ +L  G+  + ITY  +I      G  ++A  +  ++   G ++D + +  L K
Sbjct: 473 MFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIK 529



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 147/298 (49%), Gaps = 38/298 (12%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH------------------ 156
           + D   +  ++  LC  G+I +A+ L R+M +KG  P+V+T+                  
Sbjct: 343 QPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 402

Query: 157 -----------------NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
                            N ++  LCK G +++A  +I+EM     +P+  +YN  I   C
Sbjct: 403 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 462

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
              ++++A H+F  +   G+  N +T+N ++HAL + G   DAV+   E++       + 
Sbjct: 463 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG---CSL 519

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DV++   L+ +  K+G+  ++L L  +M +K I+ + V+YN+LI+  C    +  A    
Sbjct: 520 DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELS 579

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            QML +G  PD++TYNTL+N LCK G +  A +    L    V PD I+Y  +I   C
Sbjct: 580 KQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHC 637



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 2/140 (1%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           C+L  D   +  +I+ +C  G +  +L L  +M +KG  P+ +++N L++ELCK   +  
Sbjct: 517 CSL--DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRD 574

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A  + ++M     +P+  TYN  I G C++  +  AL+L   + N  + P+ +T+NIL+ 
Sbjct: 575 ALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634

Query: 232 ALCKKGLLGDAVKFLGEVLA 251
             CK  LL DA   L   +A
Sbjct: 635 WHCKVRLLDDAAMLLNRAMA 654



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 1/166 (0%)

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
           V P    +NV++    R    ++A ++ R ++    V    FTF     A  R G   +A
Sbjct: 135 VQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEA 194

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            +L + M   G  PD   Y  +I A C+ G +  A  L +EML  G   D+ T+ ++++G
Sbjct: 195 LALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRG 254

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
            C  G ++EA  +  ++ T G     + +  L +   R++++D+AR
Sbjct: 255 MCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 222/448 (49%), Gaps = 40/448 (8%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LCL  +  + L  R  + ++   P+V T N +++ LCK GDL +A  ++  M  +  SP+
Sbjct: 171 LCLARERSSELAWR--LFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPD 228

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TYN+ I GY +  EL++   L   M   G RP+ VT+N LV+  CK G +  A  +  
Sbjct: 229 VVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFA 288

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E+  +      ++V+T +  +D++ KNG   +A+ L+  M  K ++ + V Y  L++G C
Sbjct: 289 EMKREG---VMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTC 345

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G +  A     +M+++G   +V+TY  L++ LCK+GK+ EA   + ++ + G+  +++
Sbjct: 346 KAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANEL 405

Query: 368 SYKTIIQ-----------------------------------GLCIHGDIVKAREFLLSM 392
            Y T+I                                    GLC    + +A+  L  M
Sbjct: 406 LYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKM 465

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
            E  + P   I+  I+D   +    S A ++   M+  G   N+ T+ AL+    + GSI
Sbjct: 466 DECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSI 525

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +A S   +M+  G+ P+V  Y  L+   C  G +  A+ L DEM+ +G++ D +  T L
Sbjct: 526 DEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSL 585

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAID 540
           + GH  +GN+++A  + AK+   GL +D
Sbjct: 586 MDGHLKQGNLQDAFALKAKMINSGLQLD 613



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 211/478 (44%), Gaps = 73/478 (15%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  G +  A  L  +M   G  PDV+T+N L++   K G+LE+ + ++ EM      P+
Sbjct: 204 LCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPD 263

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TYNA +  +C+   +++A   F+ M   G+  N VT +  V A CK G++ +A+K   
Sbjct: 264 VVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFA 323

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           ++     G   ++V T T L+D   K G    AL L N+M Q+ +  ++V Y VL++G C
Sbjct: 324 QMRMK--GMKPNEV-TYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLC 380

Query: 308 LNGDISSA--------------------------FAY---------FCQMLKRGFLPDVI 332
             G ++ A                          F Y           +M  +G   DV 
Sbjct: 381 KEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVS 440

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI-------------------- 372
            Y  L+  LC   KLDEA      + + G+ P+ + Y  I                    
Sbjct: 441 LYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKM 500

Query: 373 ---------------IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
                          + GLC  G I +A      M++  + P    +  ++DG  + G L
Sbjct: 501 MDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRL 560

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             A  + D M+  G+S +     +L+    + G++ DAF+LK +M+  G+  D++ Y   
Sbjct: 561 DKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCF 620

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           +   CNL  I  A ++  EM+  GITPD + Y  LI      GNM+EA  +  ++++L
Sbjct: 621 VWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMESL 678



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 191/427 (44%), Gaps = 44/427 (10%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           ++  +P V+  + L++ L   G L+ A   +  + E+R  PN  T N  +    R    +
Sbjct: 123 RRSALPSVV--DTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSE 180

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
            A  LF  +      PN  T NI++  LCK+G L +A   L  + A      + DV+T  
Sbjct: 181 LAWRLFEQLP----APNVFTFNIMIDFLCKEGDLAEARALLARMKAIG---CSPDVVTYN 233

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            L+D Y K G+  +   L  +M     + D+V YN L+N FC  G +  A++YF +M + 
Sbjct: 234 SLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKRE 293

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G + +V+T++T ++  CK G + EA   +  +   G+ P++++Y  ++ G C  G +  A
Sbjct: 294 GVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDA 353

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
                 M+++ V      + V++DG  + G ++ A  +  LM   G+ +N   +  LI  
Sbjct: 354 LVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHG 413

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI------------------ 487
                +   A SL  EM   G+  DV  Y  LI   CNL  +                  
Sbjct: 414 HFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPN 473

Query: 488 -----------------HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
                              A+ L  +M+  G  P+I+TY  L+ G C  G++ EA   F 
Sbjct: 474 NVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFN 533

Query: 531 KIQTLGL 537
           K+  LGL
Sbjct: 534 KMVDLGL 540



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 136/255 (53%), Gaps = 2/255 (0%)

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            CL  + SS  A+  ++ ++   P+V T+N +++ LCK+G L EA      +   G +PD
Sbjct: 171 LCLARERSSELAW--RLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPD 228

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++Y ++I G    G++ +  + +  M      P+   +N +++ + + G +  A+S   
Sbjct: 229 VVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFA 288

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   GV +NV TF+  + A  + G + +A  L  +M + G+ P+  TY  L+  +C  G
Sbjct: 289 EMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAG 348

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  AL L +EM+++G+  +++TYT L+ G C  G + EAE+VF  ++  G+  + + + 
Sbjct: 349 RLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYT 408

Query: 546 ILKKRYRRMKESDKA 560
            L   +   K S++A
Sbjct: 409 TLIHGHFVYKNSERA 423


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 209/462 (45%), Gaps = 46/462 (9%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS- 180
           + V+RD  +  K  +A++    MI+ G +P V+T N +++   K GDLE+ D +  EM  
Sbjct: 247 LKVLRDSRMMNK-ASAVY--ETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 303

Query: 181 -------------------------------EMRPSPNCAT---YNAFITGYCRVNELDK 206
                                          +MR S    T   +N  I GYC+    D 
Sbjct: 304 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDD 363

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A  +   M N GI P   T+NI + ALC  G + DA + L  +       A  DV++   
Sbjct: 364 AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM-------AAPDVVSYNT 416

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           LM  Y K G   +A  L++D+   +I   IV YN LI+G C +G++  A     +M  + 
Sbjct: 417 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 476

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PDVITY TL+    K G L  A+  Y  + + G+ PD  +Y T   G    GD  KA 
Sbjct: 477 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 536

Query: 387 EFLLSMLEKS-VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
                M+      P+  I+NV IDG  + G+L  A   +  +   G+  +  T+  +I  
Sbjct: 537 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 596

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
               G    A +L  EML   ++P V TY +LI      G +  A Q   EM +RG+ P+
Sbjct: 597 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 656

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++T+  L+ G C  GN+ EA     K++  G+  +   + +L
Sbjct: 657 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 698



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 190/392 (48%), Gaps = 8/392 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G    A  +  +M+  G  P   T+N  +  LC  G ++ A  ++  M+   
Sbjct: 351 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA--- 407

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  +YN  + GY ++ +  +A  LF  +    I P+ VT+N L+  LC+ G L  A 
Sbjct: 408 -APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ 466

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+          DVIT T L+  + KNG+   A  ++++M +K I+ D  AY    
Sbjct: 467 RLKEEMTTQ---LIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 523

Query: 304 NGFCLNGDISSAFAYFCQMLKRGF-LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            G    GD   AF    +M+      PD+  YN  ++ LCK G L +A  F   + + G+
Sbjct: 524 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 583

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y T+I+G   +G    AR     ML K + P    + V+I G+ + G L  AF 
Sbjct: 584 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 643

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
               M   GV  NV T NAL+    + G+I +A+    +M  +GI P+ ++Y +LI  +C
Sbjct: 644 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 703

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           +       ++LY EML + I PD  T+  L K
Sbjct: 704 DFEKWEEVVKLYKEMLDKEIEPDGYTHRALFK 735



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 182/407 (44%), Gaps = 43/407 (10%)

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
           Y + +  +K L  F  M   G  P+    NI++  L    ++  A      ++   +   
Sbjct: 215 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMI---EHGI 271

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
              VIT   ++DS FK GD  +   +W +M ++NI+   V YN+LINGF  NG +  A  
Sbjct: 272 MPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARR 331

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
           +   M + GF     ++N L+   CKQG  D+A      +   G+ P   +Y   I  LC
Sbjct: 332 FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC 391

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G I  ARE L SM    VV     +N ++ GY + G    A  + D + +  +  ++ 
Sbjct: 392 DFGRIDDARELLSSMAAPDVVS----YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIV 447

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T+N LI      G++  A  LK+EM    IFPDV TY  L+      G++ +A ++YDEM
Sbjct: 448 TYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM 507

Query: 498 LRRGITPDIITYT-----EL-------------------------------IKGHCARGN 521
           LR+GI PD   YT     EL                               I G C  GN
Sbjct: 508 LRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGN 567

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           + +A E   KI  +GL  DH+ +  + + Y    +   AR+++ + L
Sbjct: 568 LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 614



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 65/140 (46%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L  D+  +  VIR     G+   A  L  +M++K   P V+T+  L+    K G LE
Sbjct: 580 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 639

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A     EM +    PN  T+NA + G C+   +D+A      M   GI PN+ ++ +L+
Sbjct: 640 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 699

Query: 231 HALCKKGLLGDAVKFLGEVL 250
              C      + VK   E+L
Sbjct: 700 SKNCDFEKWEEVVKLYKEML 719


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 210/438 (47%), Gaps = 4/438 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I  A  L  +M  +G +PD +T+N +++   K+G L+   +   EM  M   P+  TY
Sbjct: 147 GDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITY 206

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N+ I  +C+  +L K L  +  M  +G++PN V+++ LV A CK+ ++  A+KF   V  
Sbjct: 207 NSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFY--VDM 264

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
              G   ++  T T L+D+  K G+   A  L N+M +  ++ ++V Y  LI+G C    
Sbjct: 265 RRVGHVPNE-FTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAER 323

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F +M+  G +P++ +YN L++   K   +D A      L   G+ PD + Y T
Sbjct: 324 MKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGT 383

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
            I GLC    I  A+  +  M E  +     I+  ++D Y + G+ +    + + M    
Sbjct: 384 FIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELD 443

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNLGHIHLA 490
               V TF  LI    +   +  A      M  D G+ P+   Y  +I   C    +  A
Sbjct: 444 HEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAA 503

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
             L+++M + G+ PD   YT L+ G+  +GNM EA  +  K+  +G+ +D + +  L   
Sbjct: 504 TTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWG 563

Query: 551 YRRMKESDKARDIHQKWL 568
           + +  +  KAR   ++ +
Sbjct: 564 FSQCNQLQKARSFLEEMI 581



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 188/416 (45%), Gaps = 19/416 (4%)

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
           LW  R +     VP     + L + L  +G LE+A     +M   R  P   + N  +  
Sbjct: 52  LWSTRNVC----VPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHK 107

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG------LLGDAVKFLGEVLA 251
           + ++ + D     F  M   G +P   T+NI++  + K+G       L + +KF G +  
Sbjct: 108 FAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLI-- 165

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   D +T   ++D Y K G     +  + +M   + + D++ YN LIN FC +G 
Sbjct: 166 -------PDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGK 218

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +     ++ +M + G  P+V++Y+TL++  CK+  + +A  FY  + + G  P++ +Y +
Sbjct: 219 LPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTS 278

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++   C  G++  A      MLE  V      +  +IDG      +  A  +   M++ G
Sbjct: 279 LVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAG 338

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           V  N+ ++NALI    +  ++  A  L  E+   GI PD+  Y   I   C L  I  A 
Sbjct: 339 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAK 398

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            + +EM   GI  + + YT L+  +   GN  E   +  ++Q L   +  + F +L
Sbjct: 399 VVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVL 454



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/414 (23%), Positives = 186/414 (44%), Gaps = 4/414 (0%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           + E D   + ++I   C  GK+   L   R+M Q G  P+V++++ LV+  CK   +++A
Sbjct: 198 SCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQA 257

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
                +M  +   PN  TY + +   C++  L  A  L + M   G+  N VT+  L+  
Sbjct: 258 IKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDG 317

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LC    + +A K  G+++         ++ +   L+  + K  +  +AL L N++  + I
Sbjct: 318 LCDAERMKEAEKLFGKMVT---AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 374

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           Q D++ Y   I G C    I +A     +M + G   + + Y TL++   K G   E  H
Sbjct: 375 QPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLH 434

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGY 411
               + +       +++  +I GLC +  + KA ++   M     + P   ++  +IDG 
Sbjct: 435 LLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGL 494

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +   +  A ++ + M   G+  +   + +L+    + G++ +A +L+ +M   G+  D+
Sbjct: 495 CKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDL 554

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
             Y  L+        +  A    +EM+   I PD +    ++K H   G + EA
Sbjct: 555 LAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEA 608



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 130/264 (49%)

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N L++ F   G       +F  M+  G  P V TYN +++C+ K+G ++ A   +  +  
Sbjct: 102 NGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKF 161

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ PD ++Y ++I G    G +     F   M   S  P+   +N +I+ + + G L  
Sbjct: 162 RGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPK 221

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
                  M   G+  NV +++ L+ A  +   +  A     +M   G  P+ FTY  L+ 
Sbjct: 222 GLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVD 281

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           A+C +G++  A +L +EML  G+  +++TYT LI G C    MKEAE++F K+ T G+  
Sbjct: 282 ANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIP 341

Query: 540 DHIPFRILKKRYRRMKESDKARDI 563
           +   +  L   + + K  D+A ++
Sbjct: 342 NLASYNALIHGFVKAKNMDRALEL 365



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 158/337 (46%), Gaps = 41/337 (12%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  A  L  +M++ G   +V+T+  L++ LC    +++A+ +  +M      PN 
Sbjct: 284 CKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNL 343

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG-DAVKFLG 247
           A+YNA I G+ +   +D+AL L + +   GI+P+ + +   +  LC  GL   +A K + 
Sbjct: 344 ASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLC--GLEKIEAAKVVM 401

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ------------------ 289
             + ++  KA + + T+  LMD+YFK+G+  + L L  +M +                  
Sbjct: 402 NEMQENGIKANTLIYTT--LMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLC 459

Query: 290 KN------------------IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
           KN                  +Q +   Y  +I+G C    + +A   F QM + G +PD 
Sbjct: 460 KNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDR 519

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
             Y +L++   KQG + EA      +++ G+  D ++Y +++ G      + KAR FL  
Sbjct: 520 TAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEE 579

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           M+ + ++P+  +   ++  +   G +  A  ++  ++
Sbjct: 580 MIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLM 616



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 127/282 (45%), Gaps = 15/282 (5%)

Query: 85  AVFNAL--DLILKENLDR----LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
           A +NAL    +  +N+DR    L  ++  G     ++ D   +   I  LC   KI  A 
Sbjct: 344 ASYNALIHGFVKAKNMDRALELLNELKGRG-----IQPDLLLYGTFIWGLCGLEKIEAAK 398

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            +  +M + G   + L +  L++   K G+  +  H++ EM E+       T+   I G 
Sbjct: 399 VVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGL 458

Query: 199 CRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
           C+   + KA+  F  M+N+ G++PN   +  ++  LCK+  +  A     ++  +     
Sbjct: 459 CKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEG---L 515

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
             D    T LMD   K G+  +ALAL + M +  ++ D++AY  L+ GF     +  A +
Sbjct: 516 VPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARS 575

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           +  +M+    LPD +    +L    + G +DEA      L K
Sbjct: 576 FLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMK 617


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 233/517 (45%), Gaps = 51/517 (9%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L +  + L  MRD G     +      H  VI+ LC  G+ G AL   + +      PD+
Sbjct: 46  LDQAYELLDEMRDRG-----IPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDI 100

Query: 154 LTHNYLV------------------------------------NELCKIGDLEKADHVIR 177
           +T N LV                                    N LCK G L++A  ++ 
Sbjct: 101 ITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLD 160

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
            M+E    PN  TY+  + G C+    DK   L   M   G +P+ + +N L++ LCK  
Sbjct: 161 LMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSR 220

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            L +A++ +  ++          V+T   LM+ + ++    +A  L   M ++    D++
Sbjct: 221 RLDEALELVQLMIRSG---CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVI 277

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK------QGKLDEAS 351
            YN +I G C +  +  A A   QM+    +PDVITY+T+++ LCK        KL+ A 
Sbjct: 278 NYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAAC 337

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
               ++ +TG  P+  +Y  +I+GLC      +A   L  M++  VVP+   ++++I   
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSL 397

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +  DL  A+ I  +M       N   + ALI   ++GG +  A  +  E++++   P V
Sbjct: 398 CKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV-FELMVESFRPGV 456

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TYN ++   C +G I  A+++ + M+ +   PD  +Y  LI+G C    ++EA E+F  
Sbjct: 457 ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQA 516

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           ++  G A++   + +L     + K    A  +  K +
Sbjct: 517 VEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLI 553



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 203/416 (48%), Gaps = 14/416 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC  GK+  A  L  +M  +G  P V  HN ++  LCK G    A    + ++  
Sbjct: 35  SLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGT 94

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTM-ANNGIRPNRVTHNILVHALCKKGLLGD 241
           + +P+  T+N  +    +   +++A  +F +M  ++   PN VT+  +++ LCK G L  
Sbjct: 95  KCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDR 154

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A++ L   L ++ G    +VIT ++L++   K G   +   L  +M ++  Q D++ YN 
Sbjct: 155 AIELLD--LMNETG-CCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L+NG C +  +  A      M++ G  P V+TYN+L+   C+  ++D A     V+S+ G
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD----- 416
             PD I+Y T+I GLC    +  A+  L  M+    VP+   ++ IIDG   C D     
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL--CKDWRVDA 329

Query: 417 ---LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              L  A  I ++M   G   N  T+  +I    R      A +L + M+   + PD+ +
Sbjct: 330 DWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSS 389

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           ++++IG+ C    +  A +++  M  R   P+ + Y  LI G    G + +A  VF
Sbjct: 390 FSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 183/411 (44%), Gaps = 48/411 (11%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N  +N L + G   +A  + RE    R  PN  TY + I G C+  +LD+A  L   M +
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREE---RCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            GI P    HN ++  LCK G  GDA+ +   V      K T D+IT             
Sbjct: 59  RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGT---KCTPDIIT------------- 102

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM-LKRGFLPDVITYN 335
                                 +N+L++    +G +  AF  F  M      LP+V+TY 
Sbjct: 103 ----------------------FNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYT 140

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           T++N LCK GKLD A     ++++TG  P+ I+Y  +++GLC  G   K    L  M  +
Sbjct: 141 TVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR 200

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
              P+  ++N +++G  +   L  A  +  LM+  G    V T+N+L+    R   +  A
Sbjct: 201 GFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRA 260

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           F L + M   G  PDV  YN +I   C    +  A  L  +M+     PD+ITY+ +I G
Sbjct: 261 FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320

Query: 516 HC------ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            C      A   ++ A E+   ++  G   +   + ++ +   R ++S +A
Sbjct: 321 LCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQA 371



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 15/240 (6%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D  L+   + L+ M+ TG        +   +  VI  LC   K   AL L R+MI    V
Sbjct: 330 DWKLEAACEILEMMKQTG-----CPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVV 384

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD+ + + ++  LCK  DL+ A  +   MSE    PN   Y A I G  +  E+DKA+ +
Sbjct: 385 PDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV 444

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD---DGKATSDVITSTIL 267
           F  M  +  RP   T+N ++  LC  G + +AV+ +  ++  +   DG +   +I     
Sbjct: 445 FELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCR 503

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +    +  + FQA+        K    ++  YNVL+N  C    +S A     ++++ G+
Sbjct: 504 VSCVEEAYELFQAVE------AKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 1/179 (0%)

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           E+  VP    +  +I G  + G L  A+ + D M   G+   V   N +I    + G   
Sbjct: 23  EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFG 82

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM-LRRGITPDIITYTEL 512
           DA    K +      PD+ T+N+L+ A    G +  A Q+++ M       P+++TYT +
Sbjct: 83  DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTV 142

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           I G C  G +  A E+   +   G   + I + +L +   +   +DK   + Q+   R 
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 195/404 (48%), Gaps = 8/404 (1%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNEL--CKIGDLEKADHVIREMSEMRPSPNCAT 190
           K+  A+ L  KM      PD  ++N +++ L  C+ G  +++   + E+ E    P+  T
Sbjct: 207 KLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQIT 266

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I GYCR  +++KA    + M     +P+  T NIL+  LC +G+L +A+K     +
Sbjct: 267 YNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWI 326

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC-LN 309
           +   GKA  D +T   ++    K G   +A  L  +M +K +  D   YN ++       
Sbjct: 327 SK--GKAI-DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAE 383

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G +  AF +  +M+++ F PD+ T N LL  LC +G LD A   +      G A D ++Y
Sbjct: 384 GQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTY 443

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKS-VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
            TII GLC  G   +A + L  M EK+ +VP+   +N II GY R G +  AF  R+ M+
Sbjct: 444 NTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMV 503

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
                 ++FT N L+    R G +  A  L    +  G   D  TYN +I   C  G   
Sbjct: 504 EKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFE 563

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            A  L  EM  + + PD  TY  ++      G M EAEE  +KI
Sbjct: 564 EAFDLLAEMKEKKLGPDCYTYNAILCALADAGRM-EAEEFMSKI 606



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 184/363 (50%), Gaps = 5/363 (1%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  GK   ++    ++++ G VP  +T+N +++  C+ G +EKA     +M E    P+
Sbjct: 239 LCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPD 298

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             T N  + G C    LD AL LF+T  + G   + VT+N ++  LCK+G   +A   L 
Sbjct: 299 LFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLA 358

Query: 248 EVLADDDGKATSDVIT-STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
           E+   ++ K   D  T + IL       G   +A    N M +K+ + D+   N+L+ G 
Sbjct: 359 EM---EEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGL 415

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS-KTGVAPD 365
           C  G + +A   F   + +G   D +TYNT+++ LCK+G+ +EA      +  K G+ PD
Sbjct: 416 CTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPD 475

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
           Q +Y TII G C  G + KA +F   M+EKS  P+    N+++ G  R G L  A  + +
Sbjct: 476 QTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFN 535

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
             +S G + +  T+N +I    + G   +AF L  EM    + PD +TYN ++ A  + G
Sbjct: 536 TWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAG 595

Query: 486 HIH 488
            + 
Sbjct: 596 RME 598



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 153/296 (51%), Gaps = 5/296 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC  G +  AL L    I KG   D +T+N +++ LCK G  E+A  ++ EM E +
Sbjct: 305 LLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKK 364

Query: 184 PSPNCATYNAFITGYCRVN-ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             P+C TYNA +        +++KA    + M     +P+  T NIL+  LC +G+L +A
Sbjct: 365 LGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNA 424

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN-IQTDIVAYNV 301
           +K     ++   GKA  D +T   ++    K G   +A  L  +M +KN +  D   YN 
Sbjct: 425 LKLFNTWISK--GKAI-DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNT 481

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +I G+C  G +  AF +  +M+++ F PD+ T N LL  LC++G L +A   +      G
Sbjct: 482 IILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKG 541

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
            A D ++Y TII GLC  G   +A + L  M EK + P+ + +N I+      G +
Sbjct: 542 KAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRM 597



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 177/401 (44%), Gaps = 23/401 (5%)

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK----------KGLLGDAVK 244
           I  Y   N    A  +F+ M    ++PN +T N L++AL +          K +  + +K
Sbjct: 142 IGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIK 201

Query: 245 F---------LGEVLADDDGKATSDVITSTILMDSYF--KNGDKFQALALWNDMFQKNIQ 293
           F         +G +    D     D  +   ++D  +  ++G   Q++   N++ +  + 
Sbjct: 202 FGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLV 261

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
              + YN +I+G+C  G +  AF +  +M+++ F PD+ T N LL  LC +G LD A   
Sbjct: 262 PHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKL 321

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +      G A D ++Y TII GLC  G   +A + L  M EK + P+ + +N I+     
Sbjct: 322 FNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALAD 381

Query: 414 C-GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
             G +  AF  R+ M+      ++FT N L+      G + +A  L    +  G   D  
Sbjct: 382 AEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAV 441

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRR-GITPDIITYTELIKGHCARGNMKEAEEVFAK 531
           TYN +I   C  G    A  L  EM  + G+ PD  TY  +I G+C  G +++A +   K
Sbjct: 442 TYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNK 501

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           +       D     IL +   R     KA  +   W+ + K
Sbjct: 502 MVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGK 542



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 5/156 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
            +E  D L  M +    +  L  D   +  +I   C  G++  A   R KM++K   PD+
Sbjct: 456 FEEAFDLLAEMEE----KNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDL 511

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T N L+  LC+ G L KA  +         + +  TYN  I+G C+    ++A  L + 
Sbjct: 512 FTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAE 571

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           M    + P+  T+N ++ AL   G + +A +F+ ++
Sbjct: 572 MKEKKLGPDCYTYNAILCALADAGRM-EAEEFMSKI 606


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 202/415 (48%), Gaps = 4/415 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   K   AL L   M   G    V+T+  L++ LCK GDL+ A  ++++M++  
Sbjct: 16  LIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAG 75

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN  TY A I G C+      A+     M  +G  P+ VT+N L+H LC    + DA 
Sbjct: 76  CAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAG 135

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E++  + G+   DV+T    +    K G   + L +  +M +  I  D+V +  +I
Sbjct: 136 LVLQELMI-ESGR-IPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSII 193

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C    I  AF  F  ML+RG +PD +TY+ +L+ L +  +LD        + K+G  
Sbjct: 194 SGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHY 253

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
               +Y  +I  L   GDI  A       +E   V E +  N  I    R G    A +I
Sbjct: 254 ALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNI 313

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF-PDVFTYNLLIGASC 482
              M+  G   N+ ++N +I    + G++ DA+ L ++ML  G   PDV  +N LI   C
Sbjct: 314 LLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFC 373

Query: 483 NLGHIHLALQLYDEMLRRGI-TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
             G +  A QL  EM  + I  PD++TY  +I G    G++K+A+ +  ++Q +G
Sbjct: 374 KAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 175/347 (50%), Gaps = 4/347 (1%)

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           + A YN  I G C+  +   AL L   MA NG   + VT+  L+  LCK G L DA + L
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDL-DAAQAL 67

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            + +AD       +V+T T L+D   K      A+     M +   + D+V YN LI+G 
Sbjct: 68  LQKMAD--AGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGL 125

Query: 307 CLNGDISSAFAYFCQ-MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           C+   +  A     + M++ G +PDV+TYNT ++ LCK GKLD+       + + G++PD
Sbjct: 126 CMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPD 185

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            +++ +II GLC    I  A +    MLE+  VP+   +++++D   R   L     + +
Sbjct: 186 VVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLE 245

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M+  G  +   T+  LI A  R G I  A    ++ +  G   +V+T+N  IGA C  G
Sbjct: 246 HMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSG 305

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
              LA  +   M+  G  P++++Y  +I G C  GN+ +A ++  K+
Sbjct: 306 KFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKM 352



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 1/243 (0%)

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M  R F  D   YNTL+  LCK  K   A     V++  G     ++Y T+I GLC  GD
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           +  A+  L  M +    P    +  +IDG  +     +A      ML  G   ++ T+N+
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 442 LILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           LI        + DA  + +E++++ G  PDV TYN  I   C  G +   L++ +EM R 
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           GI+PD++T+  +I G C    + +A +VF  +   G   D + + I+     R    D  
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240

Query: 561 RDI 563
            ++
Sbjct: 241 EEV 243



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 123/263 (46%), Gaps = 1/263 (0%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
            AL L + M        +V Y  LI+G C +GD+ +A A   +M   G  P+V+TY  L+
Sbjct: 28  HALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALI 87

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS-MLEKSV 397
           + LCK  +  +A      + ++G  PD ++Y ++I GLC+   +  A   L   M+E   
Sbjct: 88  DGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGR 147

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           +P+   +N  I G  + G L     + + M   G+S +V TF ++I    +   I DAF 
Sbjct: 148 IPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQ 207

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           + K ML  G  PD  TY++++        +    ++ + M++ G      TY  LI    
Sbjct: 208 VFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALI 267

Query: 518 ARGNMKEAEEVFAKIQTLGLAID 540
             G+++ A   + +    G  ++
Sbjct: 268 RAGDIESASWAYEQAMEAGCVME 290



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 129/301 (42%), Gaps = 45/301 (14%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L + L+ L+ M   G     +  D     ++I  LC   +I  A  + + M+++G VPD 
Sbjct: 167 LDKGLEMLEEMDRGG-----ISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDS 221

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           LT++ +++ L +   L+  + V+  M +       ATY   I    R  +++ A   +  
Sbjct: 222 LTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQ 281

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
               G      THN  + ALC+ G      KF                +   IL+     
Sbjct: 282 AMEAGCVMEVYTHNAFIGALCRSG------KF---------------PLAKNILL----- 315

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL-PDVI 332
                        M +     ++++YN +I+G C +G++  A+    +ML  G   PDVI
Sbjct: 316 ------------GMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVI 363

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVL-SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            +NTL++  CK G+L +A      + +K    PD ++Y T+I G    G + +A+  L  
Sbjct: 364 FFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEE 423

Query: 392 M 392
           M
Sbjct: 424 M 424


>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 719

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 223/479 (46%), Gaps = 32/479 (6%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R + AVI  L     +  A    ++M      PD  T+N L++ +C+ G +++A  ++++
Sbjct: 218 RLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQ 277

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK--- 235
           M  +  SPN  TY   I G+    ++D+A  +  TM    + P+  T    +H + +   
Sbjct: 278 MEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVA 337

Query: 236 -KGLLGDAVKFL-------------------GEVLADDDGKA---------TSDVITSTI 266
                  A++F+                    + +A + G             D  T  I
Sbjct: 338 PNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNI 397

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
            M+   K  D  +   + +   ++ ++     Y  LI    + G ++    YF QM+K G
Sbjct: 398 AMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDG 457

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            L +V +YN +++C CK   +D+A++ +  +   G+ P+ +++ T+I G C  G+I K+R
Sbjct: 458 LLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSR 517

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + L+ +LE    P+   ++ IIDG  R   + +A      M+ +G+S N  T+N LI + 
Sbjct: 518 DLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSL 577

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G +  +  L ++M  DGI PDVF++N LI + C +G +  A +L+  ML  G+ PD 
Sbjct: 578 CIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDN 637

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            TY   IK  C  G   EA+E+F  ++  G   D     I+     +  + + A+ I +
Sbjct: 638 YTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAK 696



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/519 (22%), Positives = 227/519 (43%), Gaps = 85/519 (16%)

Query: 126 RDLCLGGKIGTALWLRRKMI-QKGTVPDVLTHNYLVNE--LC-------KIGDLEKADHV 175
           +D  + G +   L+ +  ++     + D+    Y +NE  LC       ++G  +  D +
Sbjct: 145 KDQSVKGVLANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEI 204

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
             ++S +  SP+   YNA I    + N LD A   F  M+ +  +P+R T+NIL+H +C+
Sbjct: 205 FGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCR 264

Query: 236 KGLLGDAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
            G++ +A++ + ++    +G   S +V T TIL+D +F      +A  +   M  + +  
Sbjct: 265 SGVVDEALRLVKQM----EGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSP 320

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKR----------------------------- 325
                   I+G       + AF    + ++R                             
Sbjct: 321 SEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALL 380

Query: 326 ------GFLPDVITYNTLLNCLCK-----------------------------------Q 344
                 G  PD  T+N  +NCL K                                    
Sbjct: 381 KKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMA 440

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
           GK+ E +H++  + K G+  +  SY  +I   C    + KA      M  K + P    +
Sbjct: 441 GKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTF 500

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           N +IDGY + G++  +  +  ++L  G   ++FTF+++I    R   I DA     EM++
Sbjct: 501 NTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVM 560

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            G+ P+  TYN+LI + C +G +  +++L  +M   GI PD+ ++  LI+  C  G +++
Sbjct: 561 WGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVED 620

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           A+++F+ + +LGL  D+  +    K + +    ++A+++
Sbjct: 621 AKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKEL 659



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 216/488 (44%), Gaps = 33/488 (6%)

Query: 86  VFNA-LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKM 144
           ++NA +D ++K N   L  ++         + D   +  +I  +C  G +  AL L ++M
Sbjct: 219 LYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQM 278

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
              G  P+V T+  L++       +++A  V+  M   + SP+ AT  +FI G  R    
Sbjct: 279 EGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAP 338

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA---VKFLGEVLADDDGKATSDV 261
           +KA  L            R+  + L+  L  K +  +A   +K  G++    D    +  
Sbjct: 339 NKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIA 398

Query: 262 ITSTI----------LMDSYFKNGDKF---------QALAL----------WNDMFQKNI 292
           +   I          ++D + + G KF         +AL +          +N M +  +
Sbjct: 399 MNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGL 458

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             ++ +YN++I+ FC    +  A   F +M  +G  P+++T+NTL++  CK G++ ++  
Sbjct: 459 LCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRD 518

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
              +L + G  PD  ++ +II GLC    I  A      M+   + P    +N++I    
Sbjct: 519 LLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLC 578

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
             GD+  +  +   M + G++ +VF+FNALI +  R G + DA  L   ML  G+ PD +
Sbjct: 579 IIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNY 638

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY   I   C  G  + A +L+  M   G  PD  T   ++     +   + A+++    
Sbjct: 639 TYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTC 698

Query: 533 QTLGLAID 540
              G+ ++
Sbjct: 699 SEWGILVN 706


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 214/442 (48%), Gaps = 2/442 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK+  A+ +   M + G  P++L  N  ++ L     LEKA   +  M  +  +PN  T
Sbjct: 184 AGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVT 243

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I GYC + +++ A+ L + M   G  P++V++  ++  LC+   + +    + +++
Sbjct: 244 YNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMV 303

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
            D+  K   D +T   L+    K+G   +AL    +  ++  Q D V Y+ ++N FC+ G
Sbjct: 304 KDN--KLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQG 361

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A     +M+ +G  PDV+TY  ++N LCK GK++EA      + K G  P+ +SY 
Sbjct: 362 RMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYT 421

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            ++ GLC HG+ ++ARE + +  E    P    ++V++ G  R G LS A  +   ML+ 
Sbjct: 422 ALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTK 481

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G        N LI +      + +A    +E L  G   +   +  +I   C   +I  A
Sbjct: 482 GFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTA 541

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L L D+M      PD +T+T +I     +G ++EA     K+   GL    + +R +  +
Sbjct: 542 LSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQ 601

Query: 551 YRRMKESDKARDIHQKWLLRNK 572
           Y +M   ++   +  K L R+K
Sbjct: 602 YCKMGRVEELIKLLGKMLSRSK 623



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 183/409 (44%), Gaps = 37/409 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+  C   ++  A+ L  +M  KG  PD +++  ++  LC+   +++  +++ +M    
Sbjct: 247 LIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKM---- 302

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
                                         + +N + P++VT+N LVH L K G   +A+
Sbjct: 303 ------------------------------VKDNKLFPDQVTYNTLVHMLSKHGHADEAL 332

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +FL E    ++     D +  + +++S+   G   +A  + N+M  K    D+V Y  ++
Sbjct: 333 EFLRET---EERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVV 389

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C  G +  A     QM K G  P+ ++Y  LLN LC+ G   EA        +    
Sbjct: 390 NGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWT 449

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ I+Y  ++ GL   G + +A + +  ML K   P P   N++I        ++ A   
Sbjct: 450 PNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKF 509

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            +  L+ G + N   F  +I    +  +I  A SL  +M L+   PD  T+  +I A   
Sbjct: 510 MEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGK 569

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            G I  A     +ML++G+ P  +TY  +I  +C  G ++E  ++  K+
Sbjct: 570 KGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKM 618



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/495 (22%), Positives = 223/495 (45%), Gaps = 29/495 (5%)

Query: 22  LYQTFDSIKLNVARIFSNSRTCSDDDNLPCTLNDIMSYVGDQCRSK-TRHWFSNKDSDNE 80
           LYQ   +++L     F   + C  D     +   +M ++    R K  R+       DN+
Sbjct: 254 LYQVEHAMELIAEMPF---KGCPPDK---VSYYTVMGFLCQDKRIKEVRNLMEKMVKDNK 307

Query: 81  GNP-QAVFNALDLILK------ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGK 133
             P Q  +N L  +L       E L+ L+   + G      + D   + A++   C+ G+
Sbjct: 308 LFPDQVTYNTLVHMLSKHGHADEALEFLRETEERG-----FQVDKVGYSAIVNSFCMQGR 362

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           +  A  +  +MI KG  PDV+T+  +VN LCK+G +E+A  ++++M +    PN  +Y A
Sbjct: 363 MDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTA 422

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            + G C+     +A  + +T   +   PN +T+++++H L ++G L +A   + E+L   
Sbjct: 423 LLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKG 482

Query: 254 --DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   +++  ++ ++       KF       +   +    + V +  +I+GFC + +
Sbjct: 483 FFPTPVEINLLIKSLCLEQKMNEAKKFM-----EECLNRGCAVNAVNFTTVIHGFCQSDN 537

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I +A +    M      PD +T+  +++ L K+G+++EA+ +   + K G+ P  ++Y+ 
Sbjct: 538 IDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRA 597

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I   C  G + +  + L  ML +S       +N +I+     G+   A  +  L+L   
Sbjct: 598 VIHQYCKMGRVEELIKLLGKMLSRSKCRTA--YNQVIEKLCNFGNPEAADKVVGLVLRTA 655

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              +  T + L+ +    G    A+ +   M    + PD+     L       G +  A 
Sbjct: 656 SRIDANTCHMLMESYLSKGIPLSAYKVACRMFDRNLIPDLKLCEKLSKKLVLEGKLEEAD 715

Query: 492 QLYDEMLRRG-ITPD 505
            L  + ++RG I+PD
Sbjct: 716 NLMLQFVQRGNISPD 730



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 184/405 (45%), Gaps = 6/405 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHV 175
           D   +  V+  LC   +I     L  KM++   + PD +T+N LV+ L K G  ++A   
Sbjct: 275 DKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEF 334

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           +RE  E     +   Y+A +  +C    +D+A  + + M   G  P+ VT+  +V+ LCK
Sbjct: 335 LRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCK 394

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G + +A K L ++          + ++ T L++   ++G+  +A  + N   +     +
Sbjct: 395 VGKVEEAKKMLQQMYKHG---CKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPN 451

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
            + Y+V+++G    G +S A     +ML +GF P  +  N L+  LC + K++EA  F  
Sbjct: 452 AITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFME 511

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
                G A + +++ T+I G C   +I  A   L  M   +  P+   +  IID  G+ G
Sbjct: 512 ECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKG 571

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            +  A      ML  G+     T+ A+I    + G + +   L  +ML          YN
Sbjct: 572 RIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCRT--AYN 629

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            +I   CN G+   A ++   +LR     D  T   L++ + ++G
Sbjct: 630 QVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKG 674



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 137/305 (44%), Gaps = 1/305 (0%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +M SY + G    A+ +   M +  ++ +++  N  I+   +   +  A  +  +M   G
Sbjct: 177 VMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVG 236

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+V+TYN L+   C   +++ A      +   G  PD++SY T++  LC    I + R
Sbjct: 237 ITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVR 296

Query: 387 EFLLSML-EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
             +  M+ +  + P+   +N ++    + G    A          G   +   ++A++ +
Sbjct: 297 NLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNS 356

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
               G +  A  +  EM+  G  PDV TY  ++   C +G +  A ++  +M + G  P+
Sbjct: 357 FCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPN 416

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            ++YT L+ G C  GN  EA E+    +      + I + ++    RR  +  +A D+ +
Sbjct: 417 TVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVR 476

Query: 566 KWLLR 570
           + L +
Sbjct: 477 EMLTK 481



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 121/254 (47%), Gaps = 7/254 (2%)

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
           A+  ++  +   G + +A      M K G  P+++  NT ++ L    KL++A  F   +
Sbjct: 173 AFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERM 232

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
              G+ P+ ++Y  +I+G C    +  A E +  M  K   P+   +  ++ G+  C D 
Sbjct: 233 QLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVM-GF-LCQD- 289

Query: 418 SNAFSIRDLMLSFGVSSNVF----TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
                +R+LM      + +F    T+N L+   ++ G   +A    +E    G   D   
Sbjct: 290 KRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVG 349

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y+ ++ + C  G +  A ++ +EM+ +G +PD++TYT ++ G C  G ++EA+++  ++ 
Sbjct: 350 YSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMY 409

Query: 534 TLGLAIDHIPFRIL 547
             G   + + +  L
Sbjct: 410 KHGCKPNTVSYTAL 423



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 1/165 (0%)

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           +   P  +  ++  Y R G L NA  +  +M   GV  N+   N  I        +  A 
Sbjct: 167 IARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKAL 226

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
              + M L GI P+V TYN LI   C+L  +  A++L  EM  +G  PD ++Y  ++   
Sbjct: 227 RFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFL 286

Query: 517 CARGNMKEAEEVFAK-IQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           C    +KE   +  K ++   L  D + +  L     +   +D+A
Sbjct: 287 CQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEA 331



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 93/235 (39%), Gaps = 1/235 (0%)

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           D I Y  +L  L K      A     ++ + G+A    ++  ++      G +  A + L
Sbjct: 135 DPIVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVL 194

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M +  V P   I N  I        L  A    + M   G++ NV T+N LI      
Sbjct: 195 TMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDL 254

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR-RGITPDIIT 508
             +  A  L  EM   G  PD  +Y  ++G  C    I     L ++M++   + PD +T
Sbjct: 255 YQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVT 314

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           Y  L+      G+  EA E   + +  G  +D + +  +   +      D+A++I
Sbjct: 315 YNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEI 369



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 68/142 (47%)

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G++     F  ++++ +R G + +A  +   M   G+ P++   N  I        +  A
Sbjct: 166 GIARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKA 225

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L+  + M   GITP+++TY  LIKG+C    ++ A E+ A++   G   D + +  +   
Sbjct: 226 LRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGF 285

Query: 551 YRRMKESDKARDIHQKWLLRNK 572
             + K   + R++ +K +  NK
Sbjct: 286 LCQDKRIKEVRNLMEKMVKDNK 307


>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
 gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 206/391 (52%), Gaps = 13/391 (3%)

Query: 129 CLGGKIGTALWLRRKM--IQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           C  G +  AL L RKM  +  G++ P+ +T+N L++  CKIG +  A+ +  EM ++   
Sbjct: 284 CKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIE 343

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           PN  TY   I GY R   L++AL L   M   G+ PN V +N ++H L  +G +  A   
Sbjct: 344 PNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLV 403

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             ++    D +   D  T +IL     +NG    AL   N + + N+  D  ++N+LIN 
Sbjct: 404 FTDM---SDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINF 460

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C + + ++A     +M  RG +PDV+T+ TL++  CK+G ++ A   Y  + K    P+
Sbjct: 461 LCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPN 520

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            + Y +II GLC  G +  AR  L+ +L++  + +   +N +I+GY  CG    AF +  
Sbjct: 521 LLVYNSIINGLCKDGLVDVARS-LVDVLQRMGLVDTITYNTLINGYFNCGKFDKAFKLST 579

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL---IGASC 482
           LM + G+ ++  T+N +I    + G + +A  L   M+L G+ PD  TY  L   I  +C
Sbjct: 580 LMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNC 639

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +   +   ++L+D M+ +G+ PD +TY  ++
Sbjct: 640 SAEEV---IELHDYMVLKGVVPDKLTYENIV 667



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 206/432 (47%), Gaps = 7/432 (1%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           ++M+  G + +V T N +V+ LCK   L++A  V   + +    PN  T+N  + G C++
Sbjct: 227 KEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKM 286

Query: 202 NELDKALHL---FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            ++D AL L      M+   I+PN VT+N L+   CK G +  A +   E++  D     
Sbjct: 287 GDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKID---IE 343

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            +V T   +++ Y + G   +AL L ++M ++ +  + V YN +++   + GD+  A   
Sbjct: 344 PNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLV 403

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           F  M  +    D  T + L   LC+ G +  A  F   + +  +  D  S+  +I  LC 
Sbjct: 404 FTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCK 463

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
             +   AR+ L  M  + +VP+   +  +IDG+ + G++ +A  + D M+      N+  
Sbjct: 464 SNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLV 523

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N++I    + G +  A SL   +   G+  D  TYN LI    N G    A +L   M 
Sbjct: 524 YNSIINGLCKDGLVDVARSLVDVLQRMGLV-DTITYNTLINGYFNCGKFDKAFKLSTLMQ 582

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             GI     TY  +IK  C  G ++EA+E+   +   G+  D+I +R L     +   ++
Sbjct: 583 NAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAE 642

Query: 559 KARDIHQKWLLR 570
           +  ++H   +L+
Sbjct: 643 EVIELHDYMVLK 654



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 117/251 (46%), Gaps = 4/251 (1%)

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           R LC  G I TAL    ++++   + D  +HN L+N LCK  +   A  ++  M      
Sbjct: 424 RGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLV 483

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  T+   I G+C+   ++ A+ ++  M     +PN + +N +++ LCK GL+ D  + 
Sbjct: 484 PDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLV-DVARS 542

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L +VL         D IT   L++ YF  G   +A  L   M    I      YN +I  
Sbjct: 543 LVDVLQR---MGLVDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKF 599

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C  G +  A      M+  G LPD ITY TL+  + K    +E    +  +   GV PD
Sbjct: 600 LCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPD 659

Query: 366 QISYKTIIQGL 376
           +++Y+ I+  L
Sbjct: 660 KLTYENIVSPL 670



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 75/311 (24%)

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA-SHFY 354
           I A+N  ++      +I   +  + +M+  G++ +V T+N +++ LCK  KL EA S FY
Sbjct: 203 IHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFY 262

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM---LEKSVVPEPHIWNVIIDGY 411
            +L K+G+ P+ +++  ++ G C  GD+  A + +  M      S+ P    +N +IDG+
Sbjct: 263 RIL-KSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGF 321

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            + G ++ A  +R+ M+   +  NV T+  +I   +R G + +A  L  EM+  G+ P+ 
Sbjct: 322 CKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNS 381

Query: 472 FTYNLLI----------GAS-------------------------CNLGHIHLALQLYDE 496
             YN ++          GAS                         C  G+I  AL+  ++
Sbjct: 382 VVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQ 441

Query: 497 MLR-----------------------------------RGITPDIITYTELIKGHCARGN 521
           +L                                    RG+ PD++T+  LI GHC  GN
Sbjct: 442 VLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGN 501

Query: 522 MKEAEEVFAKI 532
           ++ A +V+ K+
Sbjct: 502 IESAVQVYDKM 512



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 108/237 (45%), Gaps = 7/237 (2%)

Query: 320 CQMLKR----GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           C+++K+    G    +  +N  L+ L K  ++      Y  +   G   +  ++  ++  
Sbjct: 188 CEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHA 247

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI---RDLMLSFGV 432
           LC    + +A      +L+  + P    +N+++DG  + GD+  A  +    ++M +  +
Sbjct: 248 LCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSI 307

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             N  T+N+LI    + G I  A  L+ EM+   I P+V TY  +I      G +  AL+
Sbjct: 308 KPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALR 367

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           L DEM+ RG+ P+ + Y  ++      G++  A  VF  +    + +D     IL +
Sbjct: 368 LCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTR 424



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 68/139 (48%), Gaps = 1/139 (0%)

Query: 429 SFGV-SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           S+G+  SN   F+AL+ A T+ G+   A  + K++ ++G +  +  +N  +     +  I
Sbjct: 160 SYGICESNHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEI 219

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           H    +Y EM+  G   ++ T+  ++   C    ++EA  VF +I   G+  + + F ++
Sbjct: 220 HRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMM 279

Query: 548 KKRYRRMKESDKARDIHQK 566
                +M + D A  + +K
Sbjct: 280 VDGACKMGDMDLALKLVRK 298



 Score = 39.3 bits (90), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 24/105 (22%), Positives = 47/105 (44%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK   A  L   M   G +    T+N ++  LCK G +++A  ++  M      P+  TY
Sbjct: 569 GKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITY 628

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
              +    +    ++ + L   M   G+ P+++T+  +V  L ++
Sbjct: 629 RTLVININKNCSAEEVIELHDYMVLKGVVPDKLTYENIVSPLLQE 673


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 206/417 (49%), Gaps = 2/417 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           G K+         M+ +G  PDV T N L+  LC+   +  A  ++ EM +    P+  T
Sbjct: 173 GNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKT 232

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           +   + G+     LD A+ +   M   G     VT N+LV+  CK+G + +A++F+ E+ 
Sbjct: 233 FTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMS 292

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             +      D  T  +L++   K G    AL + + M ++    DI  YN LI+G C  G
Sbjct: 293 LREG--FFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLG 350

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           ++  A     QM++R   P+ +TYNT+++ LCK+ +++EA+    VL+  G+ PD  +Y 
Sbjct: 351 EVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYN 410

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           ++IQGLC+  +   A E    M  K   P+   +N++ID     G L  A ++   M   
Sbjct: 411 SLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVS 470

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G + NV T+N LI    +   I +A  +  +M L G+  +  TYN LI   C    +  A
Sbjct: 471 GCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEA 530

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            QL D+M+  G+ PD  TY  L+   C  G++K+A ++   + + G   D + +  L
Sbjct: 531 SQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTL 587



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 206/440 (46%), Gaps = 5/440 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC   +I  A+ L  +M   G +PD  T   ++    + G+L+ A  V  +M E  
Sbjct: 201 LIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAG 260

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMA-NNGIRPNRVTHNILVHALCKKGLLGDA 242
                 T N  + G+C+   +++AL     M+   G  P++ T N+LV+ L K G +  A
Sbjct: 261 CVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHA 320

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++ +  +L +       D+ T   L+    K G+  +A+ + N M +++   + V YN +
Sbjct: 321 LEVMDMMLREG---FDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTI 377

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+  C    +  A      +  +G LPDV TYN+L+  LC       A   Y  +   G 
Sbjct: 378 ISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGC 437

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD+ +Y  +I  LC  G + +A   L  M           +N +IDG+ +   ++ A  
Sbjct: 438 HPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEE 497

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I D M   GVS N  T+N LI    +   + +A  L  +M+++G+ PD FTYN L+   C
Sbjct: 498 IFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFC 557

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI-DH 541
             G I  A  +   M   G  PDI+TY  LI G C  G ++ A ++   IQ  G+ +  H
Sbjct: 558 KAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPH 617

Query: 542 IPFRILKKRYRRMKESDKAR 561
               +++  +RR +  +  R
Sbjct: 618 AYNPVIQALFRRKRSKEAVR 637



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 194/395 (49%), Gaps = 6/395 (1%)

Query: 128 LCLGGKIGTALWLRRKM-IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
            C  G+I  AL    +M +++G  PD  T N LVN L K G ++ A  V+  M      P
Sbjct: 275 FCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDP 334

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           +  TYN+ I+G C++ E+D+A+ + + M      PN VT+N ++  LCK+  + +A K L
Sbjct: 335 DIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATK-L 393

Query: 247 GEVLADDDGKAT-SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             VL    GK    DV T   L+     + +   A+ L+ +M  K    D   YN+LI+ 
Sbjct: 394 ALVLT---GKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDS 450

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C  G +  A     +M   G   +VITYNTL++  CK  ++ EA   +  +   GV+ +
Sbjct: 451 LCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRN 510

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++Y T+I GLC    + +A + +  M+ + + P+   +N ++  + + GD+  A  I  
Sbjct: 511 SVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQ 570

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M S G   ++ T+  LI    + G +  A  L + + + GI      YN +I A     
Sbjct: 571 TMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRK 630

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
               A++L+ EM+ +   PD +TY  + +G C  G
Sbjct: 631 RSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGG 665



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 195/393 (49%), Gaps = 4/393 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  L   G +  AL +   M+++G  PD+ T+N L++ LCK+G++++A  V+ +M E  
Sbjct: 307 LVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERD 366

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SPN  TYN  I+  C+ N++++A  L   +   GI P+  T+N L+  LC       A+
Sbjct: 367 CSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAM 426

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+          D  T  +L+DS    G   +AL L  +M       +++ YN LI
Sbjct: 427 ELYKEMKTKG---CHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLI 483

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GFC N  I+ A   F QM  +G   + +TYNTL++ LCK  +++EAS     +   G+ 
Sbjct: 484 DGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLR 543

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD+ +Y +++   C  GDI KA + + +M      P+   +  +I G  + G +  A  +
Sbjct: 544 PDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKL 603

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              +   G++     +N +I A  R     +A  L +EM+     PD  TY ++    C 
Sbjct: 604 LRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQ 663

Query: 484 LG-HIHLALQLYDEMLRRGITPDIITYTELIKG 515
            G  I  A+    EML RG  P+  ++  L +G
Sbjct: 664 GGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEG 696



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 198/422 (46%), Gaps = 20/422 (4%)

Query: 81  GNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWL 140
           G+ +     +D++L+E  D                 D   + ++I  LC  G++  A+ +
Sbjct: 315 GHVKHALEVMDMMLREGFD----------------PDIYTYNSLISGLCKLGEVDEAVKV 358

Query: 141 RRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCR 200
             +MI++   P+ +T+N +++ LCK   +E+A  +   ++     P+  TYN+ I G C 
Sbjct: 359 LNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCL 418

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
                 A+ L+  M   G  P+  T+N+L+ +LC +G L +A+  L E+   +      +
Sbjct: 419 SRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEM---EVSGCARN 475

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           VIT   L+D + KN    +A  +++ M  + +  + V YN LI+G C +  +  A     
Sbjct: 476 VITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMD 535

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           QM+  G  PD  TYN+LL   CK G + +A+     ++  G  PD ++Y T+I GLC  G
Sbjct: 536 QMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAG 595

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            +  A + L ++  K +   PH +N +I    R      A  +   M+    + +  T+ 
Sbjct: 596 RVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYK 655

Query: 441 ALILAETRGGS-IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
            +     +GG  I +A     EML  G  P+  ++ +L     +L  +   ++L D ++ 
Sbjct: 656 IVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVME 715

Query: 500 RG 501
           + 
Sbjct: 716 KA 717



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 192/415 (46%), Gaps = 7/415 (1%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM-ANN 217
           ++++L K G+ +    +++EM       +  +   FI  Y      ++ L     M    
Sbjct: 95  VLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEF 154

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT-SDVITSTILMDSYFKNGD 276
           G+  N   +N L++ L      G+ +K +    ++   +    DV T  IL+ +  +   
Sbjct: 155 GVVANTHFYNFLLNVLVD----GNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQ 210

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
              A+ L  +M    +  D   +  ++ GF   G++  A     QM++ G +   +T N 
Sbjct: 211 IRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNV 270

Query: 337 LLNCLCKQGKLDEASHFYGVLS-KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           L+N  CK+G+++EA  F   +S + G  PD+ ++  ++ GL   G +  A E +  ML +
Sbjct: 271 LVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLRE 330

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
              P+ + +N +I G  + G++  A  + + M+    S N  T+N +I    +   + +A
Sbjct: 331 GFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEA 390

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             L   +   GI PDV TYN LI   C   +  +A++LY EM  +G  PD  TY  LI  
Sbjct: 391 TKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDS 450

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            C RG ++EA  +  +++  G A + I +  L   + + K   +A +I  +  L+
Sbjct: 451 LCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQ 505



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 84/182 (46%), Gaps = 1/182 (0%)

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
           +M+ + + P+   +N++I    R   +  A  + + M  FG+  +  TF  ++      G
Sbjct: 185 NMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEG 244

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM-LRRGITPDIITY 509
           ++  A  +K++M+  G      T N+L+   C  G I  AL+  +EM LR G  PD  T+
Sbjct: 245 NLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTF 304

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
             L+ G    G++K A EV   +   G   D   +  L     ++ E D+A  +  + + 
Sbjct: 305 NMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIE 364

Query: 570 RN 571
           R+
Sbjct: 365 RD 366


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 225/475 (47%), Gaps = 13/475 (2%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           + DR+  MR   P   T   +Y     ++  L       T + L +K    G  PD+ T 
Sbjct: 50  SFDRMLLMRPPPP---TFHFNY-----ILSSLVNNKHYPTVISLFKKFESNGATPDLCTL 101

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N L+N  C +  +  A  V+  + +    PN  T N  I G C   E+ KAL+    +  
Sbjct: 102 NILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVA 161

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNG 275
            G + N+V++  L++ LCK G      K +  +L   +G +   DV+    ++ S  KN 
Sbjct: 162 QGFQLNQVSYRTLINGLCKTG----ETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNK 217

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
               A  L+++M  K I  ++V YN L+ GFC+ G +  AF+   +M  +   PDV T+N
Sbjct: 218 LLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFN 277

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           TL++ L K+GK+  A     V+ K  + PD ++Y ++I G      +  A+    SM + 
Sbjct: 278 TLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQS 337

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
            V P    +  +IDG  +   +  A S+ + M    +  ++ T+ +LI    +   +  A
Sbjct: 338 GVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERA 397

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            +L K+M   GI PDV++Y +L+ A C  G +  A + +  +L +G   ++ TY  +I G
Sbjct: 398 IALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMING 457

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            C      EA ++ +K++  G   D I F+ +        E+DKA  I ++ + R
Sbjct: 458 LCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIAR 512



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 234/506 (46%), Gaps = 61/506 (12%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++   C+ G +  A  L  +M  K   PDV T N L++ L K G ++ A  V+  M + 
Sbjct: 243 ALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKA 302

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN+ I GY  +N++  A ++F +MA +G+ PN  T+  ++  LCK+ ++ +A
Sbjct: 303 CIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEA 362

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    E+   +      D++T T L+D   KN    +A+AL   M ++ IQ D+ +Y +L
Sbjct: 363 MSLFEEMKYKN---MIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTIL 419

Query: 303 INGFCLNGDISSAFAYFCQMLKRGF----------------------------------- 327
           ++  C  G + +A  +F ++L +G+                                   
Sbjct: 420 LDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGC 479

Query: 328 LPDVITYNTLLNCL-----------------------CKQGKLDEASHFYGVLSKTGVAP 364
           +PD IT+ T++  L                        ++ +L EA     V++K  + P
Sbjct: 480 MPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKP 539

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D ++Y T++ G  +  ++  A+    SM +  V P    + ++IDG  +   +  A S+ 
Sbjct: 540 DVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLF 599

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           + M    +  N+ T+ +LI A  +   +  A +L KEM   GI PDV++Y +L+   C  
Sbjct: 600 EEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKS 659

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G +  A +++  +L +G   ++  YT +I   C  G   EA ++  K++  G   D + F
Sbjct: 660 GRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTF 719

Query: 545 RILKKRYRRMKESDKARDIHQKWLLR 570
            I+        E+DKA  I  + + R
Sbjct: 720 DIIIWALFEKDENDKAEKILXEMIAR 745



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 219/471 (46%), Gaps = 26/471 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC  G+I  AL+   +++ +G   + +++  L+N LCK G+ +    ++R++    
Sbjct: 139 LIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHS 198

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   YN  I   C+   L  A  L+S M   GI PN VT+N LV+  C  G L +A 
Sbjct: 199 VKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAF 258

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E+   +      DV T   L+D+  K G    A  +   M +  I+ D+V YN LI
Sbjct: 259 SLLNEMKLKN---INPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLI 315

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+     + +A   F  M + G  P+V TY T+++ LCK+  +DEA   +  +    + 
Sbjct: 316 DGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMI 375

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y ++I GLC +  + +A      M E+ + P+ + + +++D   + G L NA   
Sbjct: 376 PDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEF 435

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              +L  G   NV T+N +I    +     +A  LK +M   G  PD  T+  +I A   
Sbjct: 436 FQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFE 495

Query: 484 LGHIHLALQLYDEMLRRG-----------------------ITPDIITYTELIKGHCARG 520
                 A ++  EM+ RG                       I PD++TY  L+ G+    
Sbjct: 496 KDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVN 555

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            +K A+ VF  +  +G+  +   + I+     + K  D+A  + ++   +N
Sbjct: 556 ELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKN 606



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 200/410 (48%), Gaps = 3/410 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
            C    I  A  +   ++++G  P+ +T N L+  LC  G+++KA +   ++       N
Sbjct: 108 FCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLN 167

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             +Y   I G C+  E      L   +  + ++P+ V +N ++H+LCK  LLGDA     
Sbjct: 168 QVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYS 227

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E++       + +V+T   L+  +   G   +A +L N+M  KNI  D+  +N LI+   
Sbjct: 228 EMIVKG---ISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALG 284

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G + +A      M+K    PDV+TYN+L++      K+  A + +  ++++GV P+  
Sbjct: 285 KEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVR 344

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y T+I GLC    + +A      M  K+++P+   +  +IDG  +   L  A ++   M
Sbjct: 345 TYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKM 404

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              G+  +V+++  L+ A  +GG + +A    + +L+ G   +V TYN++I   C     
Sbjct: 405 KEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLF 464

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
             A+ L  +M  +G  PD IT+  +I     +    +AE++  ++   GL
Sbjct: 465 GEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGL 514



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/411 (24%), Positives = 190/411 (46%), Gaps = 28/411 (6%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R +  +I  LC    +  A+ L  +M  K  +PD++T+  L++ LCK   LE+A  + ++
Sbjct: 344 RTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKK 403

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M E    P+  +Y   +   C+   L+ A   F  +   G   N  T+N++++ LCK  L
Sbjct: 404 MKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADL 463

Query: 239 LGDAVKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ---- 293
            G+A+    ++    +GK    D IT   ++ + F+  +  +A  +  +M  + +Q    
Sbjct: 464 FGEAMDLKSKM----EGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARK 519

Query: 294 -------------------TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
                               D+V Y  L++G+ L  ++  A   F  M + G  P+V  Y
Sbjct: 520 VRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCY 579

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
             +++ LCK+  +DEA   +  +    + P+ ++Y ++I  LC +  + +A   L  M E
Sbjct: 580 TIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKE 639

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             + P+ + + +++DG  + G L  A  I   +L  G   NV  + A+I    + G   +
Sbjct: 640 HGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDE 699

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
           A  L+ +M   G  PD  T++++I A         A ++  EM+ RG+  +
Sbjct: 700 ALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 35/268 (13%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A+A ++ M           +N +++    N    +  + F +    G  PD+ T N L+N
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           C C    +  A      + K G  P+ I+  T+I+GLC                      
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFR-------------------- 146

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
                          G++  A    D +++ G   N  ++  LI    + G       L 
Sbjct: 147 ---------------GEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLL 191

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           +++    + PDV  YN +I + C    +  A  LY EM+ +GI+P+++TY  L+ G C  
Sbjct: 192 RKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIM 251

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           G++KEA  +  +++   +  D   F  L
Sbjct: 252 GHLKEAFSLLNEMKLKNINPDVCTFNTL 279



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/173 (19%), Positives = 74/173 (42%)

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P+    N++++ +     ++ AFS+   +L  G   N  T N LI      G I  A   
Sbjct: 96  PDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYF 155

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
             +++  G   +  +Y  LI   C  G      +L  ++    + PD++ Y  +I   C 
Sbjct: 156 HDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCK 215

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
              + +A ++++++   G++ + + +  L   +  M    +A  +  +  L+N
Sbjct: 216 NKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKN 268



 Score = 45.4 bits (106), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 61/126 (48%), Gaps = 5/126 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L+  +  LK M++ G     ++ D   +  ++  LC  G++  A  + ++++ KG   +V
Sbjct: 627 LERAIALLKEMKEHG-----IQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNV 681

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
             +  ++NELCK G  ++A  +  +M +    P+  T++  I      +E DKA  +   
Sbjct: 682 QVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXE 741

Query: 214 MANNGI 219
           M   G+
Sbjct: 742 MIARGL 747


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 202/426 (47%), Gaps = 6/426 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP-DVLTHNYLVNELCKIGDLEKADHV 175
           D + +  +I  LC   K G A+ L  KM  KG    DV T+  +++ LCK G   +A  +
Sbjct: 111 DAKTYGILINGLCKARKTGLAIKLHEKM--KGNCKGDVFTYGMIIDSLCKDGMTTEALDM 168

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
             EM      P+   Y++ + G CR   L +AL  F  M   GI  +  T+N L+H L +
Sbjct: 169 FSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSR 228

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            GL  +   FL  ++   D   + D  T TIL+D   K G   +A  +   M  K  + D
Sbjct: 229 AGLWKEVTWFLNLMV---DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPD 285

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           I+ YN L+NG CL G +  A   F  +  RG   +V +YN L+N  CK  K+DEA   + 
Sbjct: 286 ILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFE 345

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +   G+ P  ++Y T+I  LC  G +  A++  + M       +   + V++DG  + G
Sbjct: 346 EMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNG 405

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            L  A  +   +       N+  F+ L+    R G + +A+    E+  +G+ PD   YN
Sbjct: 406 HLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYN 465

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           +LI   CN G +  A++L  +M  +G  PD IT+  +I+       + EA ++  +++  
Sbjct: 466 ILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNR 525

Query: 536 GLAIDH 541
             + D 
Sbjct: 526 NFSPDE 531



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 179/348 (51%), Gaps = 4/348 (1%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  T    + G    N +  A+ LF  M   G+  +  T+ IL++ LCK    G A+K 
Sbjct: 75  PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL 134

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             ++     G    DV T  +++DS  K+G   +AL ++++M    I  D+V Y+ L++G
Sbjct: 135 HEKM----KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C  G +  A  +F +M  RG   DV TYN+L++ L + G   E + F  ++   G +PD
Sbjct: 191 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 250

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
             ++  +I GLC  G + +A++ L  M  K   P+   +N +++G    G L +A  + +
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 310

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            +   G+  NVF++N LI    +   I +AF L +EM   G+ P   TYN LIGA C  G
Sbjct: 311 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSG 370

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            +  A +L+ EM   G    + TY  L+ G C  G+++EA ++F  I+
Sbjct: 371 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIK 418



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 196/403 (48%), Gaps = 4/403 (0%)

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           +++G  PD +T   LV  +     +  A  +  EM+E     +  TY   I G C+  + 
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
             A+ L   M  N  + +  T+ +++ +LCK G+  +A+    E++         DV+  
Sbjct: 129 GLAIKLHEKMKGN-CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIG---AGILPDVVVY 184

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           + LMD   + G   +AL  + +M  + I  D+  YN LI+G    G       +   M+ 
Sbjct: 185 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 244

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           RGF PD  T+  L++ LCK+GK+ EA     ++   G  PD ++Y T++ GLC+ G +  
Sbjct: 245 RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLED 304

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A +   S+ ++ +      +N++I+GY +   +  AF + + M   G+  +  T+N LI 
Sbjct: 305 ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIG 364

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A  + G +  A  L  EM   G F  + TY +L+   C  GH+  A+ L+  + +    P
Sbjct: 365 ALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKP 424

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +I  ++ L+ G C  G ++EA + F +I   GL  D I + IL
Sbjct: 425 NIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNIL 467



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 213/463 (46%), Gaps = 14/463 (3%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            E D      +++ + +   I  A+ L  +M +KG   D  T+  L+N LCK     K  
Sbjct: 73  FEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKA---RKTG 129

Query: 174 HVIREMSEMRPSPNCA----TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             I+   +M+   NC     TY   I   C+     +AL +FS M   GI P+ V ++ L
Sbjct: 130 LAIKLHEKMKG--NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMF 288
           +  LC+ G L +A++F  E+    +G+  S DV T   L+    + G   +     N M 
Sbjct: 188 MDGLCRFGRLKEALEFFKEM----EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 243

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            +    D   + +LI+G C  G +  A      M  +G  PD++TYNTL+N LC  G+L+
Sbjct: 244 DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLE 303

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           +A+  +  L+  G+  +  SY  +I G C    I +A      M  K + P    +N +I
Sbjct: 304 DATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLI 363

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
               + G +  A  +   M + G    + T+  L+    + G + +A  L + +      
Sbjct: 364 GALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHK 423

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P++  +++L+   C  G +  A + +DE+ + G+ PD I Y  LI G C +G + EA ++
Sbjct: 424 PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKL 483

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             +++  G   D I F ++ +   +  E  +A  + ++   RN
Sbjct: 484 LWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN 526



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 162/334 (48%), Gaps = 8/334 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           LKE L+  K M   G     +  D   + ++I  L   G      W    M+ +G  PD 
Sbjct: 197 LKEALEFFKEMEGRG-----ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 251

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T   L++ LCK G + +A  ++  M      P+  TYN  + G C V +L+ A  LF +
Sbjct: 252 FTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFES 311

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           +A+ GI+ N  ++NIL++  CK   + +A +   E+       +T   +T   L+ +  +
Sbjct: 312 LADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPST---VTYNTLIGALCQ 368

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           +G    A  L+ +M        +  Y VL++G C NG +  A   F  + K    P++  
Sbjct: 369 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEV 428

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           ++ LL+ +C+ GKL+EA   +  +SK G+ PD I+Y  +I GLC  G + +A + L  M 
Sbjct: 429 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 488

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           EK  +P+   +NVII    +  ++  A  + + M
Sbjct: 489 EKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEM 522



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 185/414 (44%), Gaps = 38/414 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G    AL +  +MI  G +PDV+ ++ L++ LC+ G L++A    +EM    
Sbjct: 152 IIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 211

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            S +  TYN+ I G  R     +     + M + G  P+  T  IL+  LCK+G +G+A 
Sbjct: 212 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 271

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L   L    GK   D++T   LM+     G    A  L+  +  + I+ ++ +YN+LI
Sbjct: 272 QIL--ELMHHKGKE-PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 328

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL-------------------------- 337
           NG+C +  I  AF  F +M  +G  P  +TYNTL                          
Sbjct: 329 NGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQF 388

Query: 338 ---------LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
                    L+ LCK G L+EA   +  + KT   P+   +  ++ G+C  G + +A + 
Sbjct: 389 LKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQ 448

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              + +  + P+   +N++I+G    G LS A  +   M   G   +  TFN +I    +
Sbjct: 449 FDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLK 508

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
              I +A  L +EM      PD    ++L+  +      H AL      L++G+
Sbjct: 509 ENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGV 562



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 131/273 (47%), Gaps = 1/273 (0%)

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            ++  + D V    L+ G  +   I  A   F +M ++G   D  TY  L+N LCK  K 
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
             A   +  + K     D  +Y  II  LC  G   +A +    M+   ++P+  +++ +
Sbjct: 129 GLAIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           +DG  R G L  A      M   G+S++V+T+N+LI   +R G   +       M+  G 
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PD FT+ +LI   C  G +  A Q+ + M  +G  PDI+TY  L+ G C  G +++A +
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           +F  +   G+ ++   + IL   Y + ++ D+A
Sbjct: 308 LFESLADRGIKLNVFSYNILINGYCKDQKIDEA 340



 Score = 41.6 bits (96), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 42/82 (51%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE D   +  +I  LC  G +  A+ L  +M +KG +PD +T N ++  L K  ++ +A 
Sbjct: 457 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 516

Query: 174 HVIREMSEMRPSPNCATYNAFI 195
            ++ EM     SP+ A  +  +
Sbjct: 517 QLLEEMRNRNFSPDEAVTSMLL 538


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 214/433 (49%), Gaps = 3/433 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D      +++ LC  GK+     L  K   +G +P+++ +N L++  CK GD E+A+ 
Sbjct: 169 EVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANV 228

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           + +E+      P   TY A I G+C+  + +    L   M+  G+  +   +N ++ A  
Sbjct: 229 LFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQF 288

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K G   +A   +G ++         D+ T  IL+      G+  +A  L     ++ +  
Sbjct: 289 KHGCRIEAADTVGWMIKSG---CDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLP 345

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           + V+Y  LI+ +C  G+   A     +M +RG  PD++TY  L++ L   G++D A    
Sbjct: 346 NKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVR 405

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + + GV PD   Y  ++ GLC  G +  A+  L  ML+++V P+  I   ++DG+ R 
Sbjct: 406 NKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRH 465

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           GD   A  + +L +  G+   V  +NA+I    + G + DA    K M+     PD FTY
Sbjct: 466 GDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTY 525

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           + +I     +  +H AL+++  M++    P+++TYT LI G C  G++  AE+ F ++ +
Sbjct: 526 STIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLS 585

Query: 535 LGLAIDHIPFRIL 547
           L L  + + + IL
Sbjct: 586 LRLKPNVVTYTIL 598



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 206/436 (47%), Gaps = 21/436 (4%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++   + D   +  +I   C  G++  A  L  + I++G +P+ +++  L++  CK G+ 
Sbjct: 304 IKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEY 363

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A  ++ +MSE    P+  TY A I G     E+D AL + + M   G+ P+   +N+L
Sbjct: 364 LRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVL 423

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LCKKG L  A   L E+L   D     D   +  L+D + ++GD  +A  L+    +
Sbjct: 424 MSGLCKKGRLPAAKVLLAEML---DQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIE 480

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K I   +V YN +I G+C  G +  A   F +M++    PD  TY+T+++   K   L  
Sbjct: 481 KGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHG 540

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   +G++ K    P+ ++Y  +I G C+ GDI +A +    ML   + P    + ++I 
Sbjct: 541 ALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIG 600

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI---------------LAETRGGSIFD 454
            + +  +L+ A S  + ML      N  T+N L+                 +T    + +
Sbjct: 601 CFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLE 660

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           +F +   M+ DG      +YN ++   C    +  AL L D+M+ +G  PD ++   L+ 
Sbjct: 661 SFGM---MISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLH 717

Query: 515 GHCARGNMKEAEEVFA 530
           G C  G  ++   V +
Sbjct: 718 GLCLEGRSQDWNNVIS 733



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 189/428 (44%), Gaps = 38/428 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE- 181
            +I   C  G    A  L +++  KG +P V T+  ++N  CK G  E  D ++ EMSE 
Sbjct: 212 TLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSER 271

Query: 182 -------------------------------MRPS---PNCATYNAFITGYCRVNELDKA 207
                                          M  S   P+ ATYN  ITG C   E+ KA
Sbjct: 272 GLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKA 331

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L       G+ PN+V++  L+H  CK+G   + ++ L  ++   +     D++T   L
Sbjct: 332 EQLLEQAIKRGLLPNKVSYTPLIHNYCKQG---EYLRALDLLIKMSERGHKPDLVTYAAL 388

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +      G+   AL + N M +K +  D   YNVL++G C  G + +A     +ML +  
Sbjct: 389 IHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNV 448

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PD     TL++   + G  +EA   + +  + G+ P  + Y  +I+G C  G +  A  
Sbjct: 449 APDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALL 508

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M++    P+   ++ IIDGY +  DL  A  +  LM+      NV T+  LI    
Sbjct: 509 CFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFC 568

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G I  A    K+ML   + P+V TY +LIG  C   ++  A   +++ML     P+ +
Sbjct: 569 LSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDV 628

Query: 508 TYTELIKG 515
           TY  L+ G
Sbjct: 629 TYNYLMNG 636



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 203/433 (46%), Gaps = 41/433 (9%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           LD L  M + G      + D   + A+I  L + G++  AL +R KM++KG +PD   +N
Sbjct: 367 LDLLIKMSERGH-----KPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYN 421

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            L++ LCK G L  A  ++ EM +   +P+       + G+ R  + ++A  LF      
Sbjct: 422 VLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEK 481

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           GI P  V +N ++   CK G++ DA+     ++    G  + D  T + ++D Y K  D 
Sbjct: 482 GIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMI---QGLHSPDEFTYSTIIDGYIKMNDL 538

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             AL ++  M +   + ++V Y +LINGFCL+GDI+ A   F QML     P+V+TY  L
Sbjct: 539 HGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTIL 598

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           + C CK   L +A  F+  +      P+ ++Y  ++ GL  + D V +        ++S 
Sbjct: 599 IGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISN-------QRSE 651

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
             E    +++++ +G             +M+S G      ++N++++   +   +  A  
Sbjct: 652 QTEN---SLVLESFG-------------MMISDGWDRRAASYNSILICLCQHKMVKHALH 695

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIH-----LALQLYDEMLRRGITPDIITYTEL 512
           L+ +M+  G  PD  +   L+   C  G        ++ +L +  L+       + Y+E 
Sbjct: 696 LRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQVA-----VKYSEK 750

Query: 513 IKGHCARGNMKEA 525
           +    ++G   EA
Sbjct: 751 LDAFLSQGQTSEA 763



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 188/457 (41%), Gaps = 46/457 (10%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQ-KGTVPDVL 154
           E+L ++   +D  P R      +   ++V  D    G +  AL   R  I+    VPDV 
Sbjct: 86  ESLLKIMKSKDLMPTR----EAFSLVISVFADC---GLVDRALEFYRTFIKIHHCVPDVF 138

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           + N L+N L K G +E A  V  EM +     +  T    + G C+  +++    L    
Sbjct: 139 SCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKR 198

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G  PN V +N L+                                      D Y K 
Sbjct: 199 WGRGCMPNIVFYNTLI--------------------------------------DGYCKK 220

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           GD  +A  L+ ++  K     +  Y  +INGFC  G          +M +RG    +  Y
Sbjct: 221 GDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIY 280

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N +++   K G   EA+   G + K+G  PD  +Y  +I G C  G++ KA + L   ++
Sbjct: 281 NNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIK 340

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           + ++P    +  +I  Y + G+   A  +   M   G   ++ T+ ALI      G +  
Sbjct: 341 RGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDV 400

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A +++ +M+  G+ PD   YN+L+   C  G +  A  L  EML + + PD      L+ 
Sbjct: 401 ALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVD 460

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           G    G+ +EA+++F      G+    + +  + K Y
Sbjct: 461 GFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGY 497



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 1/283 (0%)

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK-RGFLPDVITYNTLLNC 340
           +L   M  K++     A++++I+ F   G +  A  ++   +K    +PDV + N+LLN 
Sbjct: 87  SLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNV 146

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           L K GK++ A   Y  +       D  +   +++GLC  G +    + +     +  +P 
Sbjct: 147 LVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPN 206

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +N +IDGY + GD   A  +   +   G    V T+ A+I    + G       L  
Sbjct: 207 IVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLV 266

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           EM   G+   +  YN +I A    G    A      M++ G  PD+ TY  LI G C+ G
Sbjct: 267 EMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCG 326

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            + +AE++  +    GL  + + +  L   Y +  E  +A D+
Sbjct: 327 EVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDL 369


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 222/465 (47%), Gaps = 39/465 (8%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K+     L  KM+ +G V DV T N L+  LCK   L  A  ++ EM+     P+  T+ 
Sbjct: 138 KLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFT 197

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             + G+    +L+ AL +   M   G     V+  +LV+  CK+G + +A++F+ EV   
Sbjct: 198 TLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEV--S 255

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
           ++G  + D +T   L++ + + G+   AL + + M +K    D+  YN LI+G C  G+ 
Sbjct: 256 EEG-FSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEF 314

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A     QM+ R   P+ +TYNTL++ LCK+ +++ A+    +L   G+ PD  ++ T+
Sbjct: 315 EKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTL 374

Query: 373 IQGLCI--HGDIV------------KAREFLLSMLEKSVVPEPH---------------- 402
           IQGLC+  + DI             K  EF  S+L  S+  E                  
Sbjct: 375 IQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGC 434

Query: 403 -----IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
                ++N +IDG  +   + +A  I D M   GVS +  T+N LI    +   + +A  
Sbjct: 435 ARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQ 494

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L  +M+++G+ PD FTYN L+   C +G I  A  +   M   G  PDI TY  LI G C
Sbjct: 495 LMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLC 554

Query: 518 ARGNMKEAEEVFAKIQTLGLAI-DHIPFRILKKRYRRMKESDKAR 561
             G +  A ++   +Q  G+ +  H    +++  + R +  +  R
Sbjct: 555 RAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMR 599



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 195/401 (48%), Gaps = 3/401 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  AL ++++M+  G +   ++   LVN  CK G +E+A   + E+SE   SP+  T+
Sbjct: 207 GDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTF 266

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N+ + G+CR+  ++ AL +   M   G  P+  T+N L+  +CK G    A++ L +++ 
Sbjct: 267 NSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMIL 326

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            +    + + +T   L+ +  K  +   A  L   +  K +  D+  +N LI G CL+ +
Sbjct: 327 RE---CSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKN 383

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A   F +M  +G  PD  TY+ L++ LC + +L EA      +  +G A + + Y T
Sbjct: 384 QDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNT 443

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC    I  A E    M    V      +N +IDG  +   +  A  + D M+  G
Sbjct: 444 LIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEG 503

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  + FT+N+L+    R G I  A  + + M  +G  PD+FTY  LIG  C  G + +A 
Sbjct: 504 LKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVAS 563

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           +L   +  +GI      Y  +I+    R   KE   +F ++
Sbjct: 564 KLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREM 604



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 191/397 (48%), Gaps = 4/397 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++   C  G +  AL +   MI+KG  PDV T+N L++ +CK+G+ EKA  ++++M   
Sbjct: 268 SLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILR 327

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SPN  TYN  I+  C+ NE++ A  L   + + G+ P+  T N L+  LC       A
Sbjct: 328 ECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIA 387

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++   E+    +     D  T +IL+DS        +AL L  +M       + V YN L
Sbjct: 388 MEMFEEM---KNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTL 444

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C +  I  A   F QM   G     +TYNTL++ LCK  +++EAS     +   G+
Sbjct: 445 IDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGL 504

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD+ +Y +++   C  GDI KA + + +M      P+   +  +I G  R G +  A  
Sbjct: 505 KPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASK 564

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   +   G+      +N +I A        +   L +EM+     PD  T+ ++    C
Sbjct: 565 LLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLC 624

Query: 483 NLG-HIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
           N G  I  A+    EML +GI P+  ++  L +G C+
Sbjct: 625 NGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCS 661



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 199/404 (49%), Gaps = 4/404 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++   C  G++  AL    ++ ++G  PD +T N LVN  C+IG++  A  ++  M E 
Sbjct: 233 VLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEK 292

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN+ I+G C++ E +KA+ +   M      PN VT+N L+ ALCK+  + +A
Sbjct: 293 GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEI-EA 351

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L  +L         DV T   L+     + ++  A+ ++ +M  K  + D   Y++L
Sbjct: 352 ATDLARILVSKG--LLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSIL 409

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+  C    +  A     +M   G   + + YNTL++ LCK  ++++A   +  +   GV
Sbjct: 410 IDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGV 469

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           +   ++Y T+I GLC +  + +A + +  M+ + + P+   +N ++  + R GD+  A  
Sbjct: 470 SRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGD 529

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I   M S G   ++FT+  LI    R G +  A  L + + + GI      YN +I A  
Sbjct: 530 IVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALF 589

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC-ARGNMKEA 525
                   ++L+ EM+ +   PD +T+  + +G C   G ++EA
Sbjct: 590 MRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEA 633



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 215/467 (46%), Gaps = 10/467 (2%)

Query: 109 PVRCTLETDYRRHV-----AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           P  CT  +    H       ++  L       +   L +++   G++P+  T   L+   
Sbjct: 41  PTLCTTPSSTTHHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSF 100

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
               ++E    ++   +E+   P+   YN  +      N+L     L S M N GI  + 
Sbjct: 101 TNFHEIENLLKILE--NELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDV 158

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
            T N+L+ ALCK   L  A+  L E +A+   K   D IT T LM  + + GD   AL +
Sbjct: 159 STFNVLIKALCKAHQLRPAILMLEE-MANHGLKP--DEITFTTLMQGFIEEGDLNGALKM 215

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
              M         V+  VL+NGFC  G +  A  +  ++ + GF PD +T+N+L+N  C+
Sbjct: 216 KKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCR 275

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G +++A      + + G  PD  +Y ++I G+C  G+  KA E L  M+ +   P    
Sbjct: 276 IGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVT 335

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N +I    +  ++  A  +  +++S G+  +V TFN LI       +   A  + +EM 
Sbjct: 336 YNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMK 395

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             G  PD FTY++LI + C    +  AL L  EM   G   + + Y  LI G C    ++
Sbjct: 396 NKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIE 455

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +AEE+F +++ LG++   + +  L     + K  ++A  +  + ++ 
Sbjct: 456 DAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIME 502



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 133/280 (47%), Gaps = 2/280 (0%)

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           + D   YN+ +N    +  +        +M+  G + DV T+N L+  LCK  +L  A  
Sbjct: 120 KPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAIL 179

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               ++  G+ PD+I++ T++QG    GD+  A +    ML    +       V+++G+ 
Sbjct: 180 MLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFC 239

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           + G +  A      +   G S +  TFN+L+    R G++ DA  +   M+  G  PDV+
Sbjct: 240 KEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVY 299

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TYN LI   C LG    A+++  +M+ R  +P+ +TY  LI   C    ++ A ++   +
Sbjct: 300 TYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARIL 359

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
            + GL  D   F  L +     K  D A ++ ++  ++NK
Sbjct: 360 VSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEE--MKNK 397


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 209/440 (47%), Gaps = 3/440 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C       AL L  +M + G  PD +T+N ++  LCK   L +   ++ +M    
Sbjct: 217 LIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSG 276

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYN  + GYC++  L +A  +   M   G+ P+  T+N +V  LC +G + +AV
Sbjct: 277 LFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAV 336

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   ++   +  K   DV+T   L+D  F++     A  L  +M  + ++ + V +N++I
Sbjct: 337 RLRDKM---ESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMI 393

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
             FC  G I  A     +M++ GF PD  TYNT++N  CK GK+ EA      + + G+ 
Sbjct: 394 KWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLK 453

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D  +  T++  +C+   +  A    +   ++  + +   +  +I GY +      A  +
Sbjct: 454 LDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKL 513

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   G+ + + T+N +I      G    A     E+L  G+ PD  T N++I   C 
Sbjct: 514 WEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCW 573

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A Q +++M+   + PDI T   L++G C  G +++   +F    + G  +D + 
Sbjct: 574 EGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVT 633

Query: 544 FRILKKRYRRMKESDKARDI 563
           + I+   + + +  + A D+
Sbjct: 634 YNIIISSFCKERRLEDAFDL 653



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 196/407 (48%), Gaps = 9/407 (2%)

Query: 139 WLRRK------MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           WL+        M  KG +PDV T+N +V  LC  G +++A  +  +M   +  P+  TYN
Sbjct: 296 WLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYN 355

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I G       D A  L   M   G++ N VTHNI++   C +G + +A   + +++  
Sbjct: 356 TLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMV-- 413

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
            +   + D  T   +++ Y K G   +A  + ++M +K ++ D    N L++  CL   +
Sbjct: 414 -ESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQL 472

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A+    +  KRG++ D +TY TL+    K  + D A   +  + +TG+    I+Y TI
Sbjct: 473 DDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTI 532

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I+GLC+ G   +A + L  +LEK +VP+    N+II GY   G +  AF   + M+   +
Sbjct: 533 IRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSL 592

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             ++FT N L+    R G +    +L    +  G   D  TYN++I + C    +  A  
Sbjct: 593 KPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFD 652

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           L  EM  + + PD  TY  ++ G    G  +EAE++  K    G  +
Sbjct: 653 LMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQV 699



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 216/472 (45%), Gaps = 54/472 (11%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           LKE  + ++ M   G     +  D   +  ++R LC  GKI  A+ LR KM     VPDV
Sbjct: 297 LKEAAEVIELMTGKG-----MLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDV 351

Query: 154 LT-----------------------------------HNYLVNELCKIGDLEKADHVIRE 178
           +T                                   HN ++   C  G +++A +V+ +
Sbjct: 352 VTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVK 411

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M E   SP+C TYN  I GYC+  ++ +A  +   M   G++ +  T N L+H +C +  
Sbjct: 412 MVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQ 471

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L DA      + A   G    +V   T++M  YFK+    +AL LW +M +  I   I+ 
Sbjct: 472 LDDAYTL--TMKARKRGYILDEVTYGTLIM-GYFKDEQADRALKLWEEMKETGIVATIIT 528

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           YN +I G CL+G    A     ++L++G +PD  T N +++  C +G +++A  F+  + 
Sbjct: 529 YNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMV 588

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           +  + PD  +   +++GLC  G + K      + + K    +   +N+II  + +   L 
Sbjct: 589 EHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLE 648

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG-------IFPDV 471
           +AF +   M    +  + +T+NA++   T+ G   +A  L  +    G         P++
Sbjct: 649 DAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPEL 708

Query: 472 FTYNLL----IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            T +++    I + C  G    A++L+ +  ++G++ +  TY +L+ G   R
Sbjct: 709 GTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKR 760



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 164/353 (46%), Gaps = 2/353 (0%)

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS-DVITSTIL 267
            +F+ M     RPN +T N L++AL +      ++ F  EV  D        +V T  IL
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNS-SHSLVFSREVFQDAVKLGVQPNVNTFNIL 217

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +  Y  + +  +AL L N M +     D V YN ++   C    ++       QM   G 
Sbjct: 218 IHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGL 277

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+  TYN L++  CK   L EA+    +++  G+ PD  +Y T+++GLC  G I +A  
Sbjct: 278 FPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVR 337

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M    +VP+   +N +IDG         AF + + M + GV  N  T N +I    
Sbjct: 338 LRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFC 397

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G I +A ++  +M+  G  PD FTYN +I   C  G +  A ++ DEM R+G+  D  
Sbjct: 398 TEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTF 457

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           T   L+   C    + +A  +  K +  G  +D + +  L   Y + +++D+A
Sbjct: 458 TLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRA 510



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 134/286 (46%), Gaps = 6/286 (2%)

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCL-NGDISSAFA--YFCQMLKRGFLPDVITYNTLLN 339
           ++N M +   + +++  N L+N     N   S  F+   F   +K G  P+V T+N L++
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIH 219

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C     +EA      + + G  PD ++Y T++  LC    + + R+ LL M    + P
Sbjct: 220 GYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFP 279

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
             + +N+++ GY +   L  A  + +LM   G+  +V+T+N ++      G I +A  L+
Sbjct: 280 NRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLR 339

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            +M    + PDV TYN LI           A +L +EM  RG+  + +T+  +IK  C  
Sbjct: 340 DKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTE 399

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESDKARD 562
           G + EA  V  K+   G + D   +  +   Y    +M E+ K  D
Sbjct: 400 GKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMD 445



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 14/181 (7%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC  G +   L L    I KG   D +T+N +++  CK   LE A  ++ EM    
Sbjct: 602 LLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKN 661

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNG-------IRPNRVTHNIL----VHA 232
             P+  TYNA +TG  +    ++A  L    A  G         P   T +++    + +
Sbjct: 662 LEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISS 721

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LC +G   DA+K   +  A+  G  + +  T   LMD   K    F   +L   M    I
Sbjct: 722 LCTQGKYKDAMKLFQQ--AEQKG-VSLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSATI 778

Query: 293 Q 293
           Q
Sbjct: 779 Q 779


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 227/485 (46%), Gaps = 39/485 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I   C  G +     L ++M +K   P+V+ ++ +V+   K G L +A  V+R+M 
Sbjct: 230 YSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV 289

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN   Y   I GY + ++   AL LF  M + G+  N    +  V+ L + G + 
Sbjct: 290 QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRME 349

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +   ++++        D +  T +MD +FK G +  A  +  +M +K+   D+VAYN
Sbjct: 350 EADELFKDMMSRG---LLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYN 406

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           VLING    G   S  ++   M + G  PD  T+NT++N  CK+G L  A      +   
Sbjct: 407 VLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSY 465

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP------------------- 401
           G+ P+ I+   ++Q LC  G+I K  + L  ML     P P                   
Sbjct: 466 GLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVI 525

Query: 402 ----------------HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
                             +N +I  + R G +  A  +   M+  G+ +++ T+NALI  
Sbjct: 526 LHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHG 585

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
                 +  AF++  +ML +G+ P+V TYN+L+G       I  A  L ++M  RG+ P+
Sbjct: 586 YCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPN 645

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
             TY  L+ GH   GNMKE  +++ ++ T G       + +L   + + K+  +A+++ Q
Sbjct: 646 ATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQ 705

Query: 566 KWLLR 570
           +  +R
Sbjct: 706 EMQVR 710



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 229/492 (46%), Gaps = 43/492 (8%)

Query: 117 DYRRHV----AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           + RR V     +I   C  G+I  A+ L   M  +G  PD++T+N L+N  CKIGDL  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             ++ E+S +   PN  TY   I  YC+   L+ AL+++  M    + P+ VT+  +++ 
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LCK G + +A     E+   ++     +  +   L+DS FK G+  +A  L   M  + I
Sbjct: 132 LCKSGKVEEAKSVFREM---EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D+V Y  L++G    G  ++A   F  +L+   +P+ +TY+ L++  CK G +++   
Sbjct: 189 GFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGEL 248

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               + +  + P+ I Y +I+ G    G + +A + +  M++++++P   ++  +IDGY 
Sbjct: 249 LLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYF 308

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP--- 469
           +      A  +   M S G+  N F  ++ +    R G + +A  L K+M+  G+ P   
Sbjct: 309 KADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRV 368

Query: 470 --------------------------------DVFTYNLLIGASCNLGHIHLALQLYDEM 497
                                           DV  YN+LI     LG  + +   +  M
Sbjct: 369 NYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGM 427

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
            + G+ PD  T+  +I  +C  GN+  A ++  ++++ GL  + I   IL +R     E 
Sbjct: 428 RQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEI 487

Query: 558 DKARDIHQKWLL 569
           +K  D+    L+
Sbjct: 488 EKTMDLLNDMLV 499



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 216/462 (46%), Gaps = 39/462 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  L   G +  A  L+ +M+ +G   DV+ +  L++ L K G    A+ + + + 
Sbjct: 160 YATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLL 219

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PNC TY+A I G+C++ +++K   L   M    I PN + ++ +V    KKGLL 
Sbjct: 220 EESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLN 279

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+  + +++  +      +V     L+D YFK   +  AL L+ +M  + ++ +    +
Sbjct: 280 EAMDVMRKMVQRN---ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVID 336

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
             +N    +G +  A   F  M+ RG LPD + Y ++++   K GK  +A +    +++ 
Sbjct: 337 SFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
               D ++Y  +I GL   G   ++  F   M +  + P+   +N +I+ Y + G+L NA
Sbjct: 397 SSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNA 455

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP----------- 469
             + + M S+G+  N  T N L+      G I     L  +ML+ G  P           
Sbjct: 456 LKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA 515

Query: 470 ------------------------DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
                                   D+ TYN LI   C LG I  A  ++ +M+ +GI  D
Sbjct: 516 SSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILAD 575

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           IITY  LI G+C   ++K+A  V +++ T G++ +   + IL
Sbjct: 576 IITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNIL 617



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 207/445 (46%), Gaps = 16/445 (3%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK   A  + ++M +K +  DV+ +N L+N L K+G  E ++     M ++  +P+ AT
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSAT 438

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           +N  I  YC+   L  AL L + M + G++PN +T NILV  LC  G +   +  L ++L
Sbjct: 439 FNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDML 498

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                   +   T   ++D+  K+      L + + +    ++ D+  YN LI+ FC  G
Sbjct: 499 VMGFHPTPT---THKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLG 555

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            I  A   F  M+ +G L D+ITYN L++  C    L +A   +  +   GV+P+  +Y 
Sbjct: 556 MIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYN 615

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            ++ GL     I +A   +  M E+ +VP    +++++ G+G+ G++     +   M++ 
Sbjct: 616 ILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK 675

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI------------ 478
           G      T+N LI    +G  +  A  L +EM + GI P+  TY++LI            
Sbjct: 676 GFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPEL 735

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
             S    +   A +L++EM  +G  P   T   +       G   +A+ +  K+      
Sbjct: 736 NKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKTV 795

Query: 539 IDHIPFRILKKRYRRMKESDKARDI 563
            + +   + + R R+ K   K  D+
Sbjct: 796 QELLAGVLWESRERKGKPGHKRHDV 820



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 189/366 (51%), Gaps = 7/366 (1%)

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
            +T  +  IR +    N+L+   C+ G +  AV+ L  +    +G A  D++T   LM+ 
Sbjct: 5   LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGM--KTEGPA-PDIVTYNTLMNG 61

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + K GD F A  L  ++   N++ +++ Y  LI+ +C +  +  A   + +M  +  +PD
Sbjct: 62  FCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPD 121

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+TY  ++N LCK GK++EA   +  + + GV P++ SY T+I  L   G++ +A     
Sbjct: 122 VVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQG 181

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M+ + +  +  ++  ++DG  + G  +NA  +  ++L   +  N  T++ALI    + G
Sbjct: 182 RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLG 241

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +     L +EM    IFP+V  Y+ ++      G ++ A+ +  +M++R I P++  Y 
Sbjct: 242 DVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYG 301

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI---PFRILKKRYRRMKESDKA-RDIHQK 566
            LI G+        A ++F ++++ GL  ++     F    KR  RM+E+D+  +D+  +
Sbjct: 302 TLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR 361

Query: 567 WLLRNK 572
            LL ++
Sbjct: 362 GLLPDR 367



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 145/337 (43%), Gaps = 38/337 (11%)

Query: 107 TGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI 166
           TG  +  L  D      +I   C  G +G AL L  +M   G  P+ +T N LV  LC  
Sbjct: 425 TGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAA 484

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           G++EK   ++ +M  M   P   T+ A +    +    D  LH+   +   G++ +  T+
Sbjct: 485 GEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTY 544

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           N L+   C+ G++                                       +A  ++ D
Sbjct: 545 NTLISTFCRLGMIR--------------------------------------RATLVFKD 566

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M  K I  DI+ YN LI+G+C++  +  AFA   QML  G  P+V TYN LL  L     
Sbjct: 567 MMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARL 626

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           + EA+     + + G+ P+  +Y  ++ G    G++ +  +    M+ K  VP+   +NV
Sbjct: 627 IKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNV 686

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +I  + +   +S A  +   M   G+  N  T++ LI
Sbjct: 687 LISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 38/255 (14%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H AV+       +    L +  +++  G   D+ T+N L++  C++G + +A  V ++M 
Sbjct: 509 HKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMM 568

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                 +  TYNA I GYC  + L KA  + S M   G+ PN  T+NIL+  L    L+ 
Sbjct: 569 GKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIK 628

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A                                        L N M ++ +  +   Y+
Sbjct: 629 EAA--------------------------------------GLVNQMKERGLVPNATTYD 650

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +L++G    G++      +C+M+ +GF+P   TYN L++C  K  K+ +A      +   
Sbjct: 651 ILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVR 710

Query: 361 GVAPDQISYKTIIQG 375
           G+ P+  +Y  +I G
Sbjct: 711 GIPPNSSTYDILICG 725


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 227/485 (46%), Gaps = 39/485 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I   C  G +     L ++M +K   P+V+ ++ +V+   K G L +A  V+R+M 
Sbjct: 230 YSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV 289

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN   Y   I GY + ++   AL LF  M + G+  N    +  V+ L + G + 
Sbjct: 290 QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRME 349

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +   ++++        D +  T +MD +FK G +  A  +  +M +K+   D+VAYN
Sbjct: 350 EADELFKDMMSRG---LLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYN 406

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           VLING    G   S  ++   M + G  PD  T+NT++N  CK+G L  A      +   
Sbjct: 407 VLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSY 465

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP------------------- 401
           G+ P+ I+   ++Q LC  G+I K  + L  ML     P P                   
Sbjct: 466 GLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVI 525

Query: 402 ----------------HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
                             +N +I  + R G +  A  +   M+  G+ +++ T+NALI  
Sbjct: 526 LHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHG 585

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
                 +  AF++  +ML +G+ P+V TYN+L+G       I  A  L ++M  RG+ P+
Sbjct: 586 YCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPN 645

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
             TY  L+ GH   GNMKE  +++ ++ T G       + +L   + + K+  +A+++ Q
Sbjct: 646 ATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQ 705

Query: 566 KWLLR 570
           +  +R
Sbjct: 706 EMQVR 710



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 229/492 (46%), Gaps = 43/492 (8%)

Query: 117 DYRRHV----AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           + RR V     +I   C  G+I  A+ L   M  +G  PD++T+N L+N  CKIGDL  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             ++ E+S +   PN  TY   I  YC+   L+ AL+++  M    + P+ VT+  +++ 
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LCK G + +A     E+   ++     +  +   L+DS FK G+  +A  L   M  + I
Sbjct: 132 LCKSGKVEEAKSVFREM---EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D+V Y  L++G    G  ++A   F  +L+   +P+ +TY+ L++  CK G +++   
Sbjct: 189 GFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGEL 248

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               + +  + P+ I Y +I+ G    G + +A + +  M++++++P   ++  +IDGY 
Sbjct: 249 LLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYF 308

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP--- 469
           +      A  +   M S G+  N F  ++ +    R G + +A  L K+M+  G+ P   
Sbjct: 309 KADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRV 368

Query: 470 --------------------------------DVFTYNLLIGASCNLGHIHLALQLYDEM 497
                                           DV  YN+LI     LG  + +   +  M
Sbjct: 369 NYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGM 427

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
            + G+ PD  T+  +I  +C  GN+  A ++  ++++ GL  + I   IL +R     E 
Sbjct: 428 RQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEI 487

Query: 558 DKARDIHQKWLL 569
           +K  D+    L+
Sbjct: 488 EKTMDLLNDMLV 499



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 216/462 (46%), Gaps = 39/462 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  L   G +  A  L+ +M+ +G   DV+ +  L++ L K G    A+ + + + 
Sbjct: 160 YATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLL 219

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PNC TY+A I G+C++ +++K   L   M    I PN + ++ +V    KKGLL 
Sbjct: 220 EESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLN 279

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+  + +++  +      +V     L+D YFK   +  AL L+ +M  + ++ +    +
Sbjct: 280 EAMDVMRKMVQRN---ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVID 336

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
             +N    +G +  A   F  M+ RG LPD + Y ++++   K GK  +A +    +++ 
Sbjct: 337 SFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
               D ++Y  +I GL   G   ++  F   M +  + P+   +N +I+ Y + G+L NA
Sbjct: 397 SSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNA 455

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP----------- 469
             + + M S+G+  N  T N L+      G I     L  +ML+ G  P           
Sbjct: 456 LKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA 515

Query: 470 ------------------------DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
                                   D+ TYN LI   C LG I  A  ++ +M+ +GI  D
Sbjct: 516 SSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILAD 575

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           IITY  LI G+C   ++K+A  V +++ T G++ +   + IL
Sbjct: 576 IITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNIL 617



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 205/444 (46%), Gaps = 16/444 (3%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK   A  + ++M +K +  DV+ +N L+N L K+G  E ++     M ++  +P+ AT
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSAT 438

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           +N  I  YC+   L  AL L + M + G++PN +T NILV  LC  G +   +  L ++L
Sbjct: 439 FNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDML 498

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                   +   T   ++D+  K+      L   + +    ++ D+  YN LI+ FC  G
Sbjct: 499 VMGFHPTPT---THKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLG 555

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            I  A   F  M+ +G L D+ITYN L++  C    L +A   +  +   GV+P+  +Y 
Sbjct: 556 MIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYN 615

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            ++ GL     I +A   +  M E+ +VP    +++++ G+G+ G++     +   M++ 
Sbjct: 616 ILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK 675

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI------------ 478
           G      T+N LI    +G  +  A  L +EM + GI P+  TY++LI            
Sbjct: 676 GFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPEL 735

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
             S    +   A +L++EM  +G  P   T   +       G   +A+ +  K+      
Sbjct: 736 NKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKTV 795

Query: 539 IDHIPFRILKKRYRRMKESDKARD 562
            + +   + + R R+ K   K  D
Sbjct: 796 QELLAGVLWESRERKGKPGHKRHD 819



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 189/366 (51%), Gaps = 7/366 (1%)

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
            +T  +  IR +    N+L+   C+ G +  AV+ L  +    +G A  D++T   LM+ 
Sbjct: 5   LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGM--KTEGPA-PDIVTYNTLMNG 61

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + K GD F A  L  ++   N++ +++ Y  LI+ +C +  +  A   + +M  +  +PD
Sbjct: 62  FCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPD 121

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+TY  ++N LCK GK++EA   +  + + GV P++ SY T+I  L   G++ +A     
Sbjct: 122 VVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQG 181

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M+ + +  +  ++  ++DG  + G  +NA  +  ++L   +  N  T++ALI    + G
Sbjct: 182 RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLG 241

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +     L +EM    IFP+V  Y+ ++      G ++ A+ +  +M++R I P++  Y 
Sbjct: 242 DVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYG 301

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI---PFRILKKRYRRMKESDKA-RDIHQK 566
            LI G+        A ++F ++++ GL  ++     F    KR  RM+E+D+  +D+  +
Sbjct: 302 TLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR 361

Query: 567 WLLRNK 572
            LL ++
Sbjct: 362 GLLPDR 367



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 144/337 (42%), Gaps = 38/337 (11%)

Query: 107 TGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI 166
           TG  +  L  D      +I   C  G +G AL L  +M   G  P+ +T N LV  LC  
Sbjct: 425 TGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAA 484

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           G++EK   ++ +M  M   P   T+ A +    +    D  LH    +   G++ +  T+
Sbjct: 485 GEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTY 544

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           N L+   C+ G++                                       +A  ++ D
Sbjct: 545 NTLISTFCRLGMIR--------------------------------------RATLVFKD 566

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M  K I  DI+ YN LI+G+C++  +  AFA   QML  G  P+V TYN LL  L     
Sbjct: 567 MMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARL 626

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           + EA+     + + G+ P+  +Y  ++ G    G++ +  +    M+ K  VP+   +NV
Sbjct: 627 IKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNV 686

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +I  + +   +S A  +   M   G+  N  T++ LI
Sbjct: 687 LISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 38/255 (14%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H AV+       +    L    +++  G   D+ T+N L++  C++G + +A  V ++M 
Sbjct: 509 HKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMM 568

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                 +  TYNA I GYC  + L KA  + S M   G+ PN  T+NIL+  L    L+ 
Sbjct: 569 GKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIK 628

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A                                        L N M ++ +  +   Y+
Sbjct: 629 EAA--------------------------------------GLVNQMKERGLVPNATTYD 650

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +L++G    G++      +C+M+ +GF+P   TYN L++C  K  K+ +A      +   
Sbjct: 651 ILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVR 710

Query: 361 GVAPDQISYKTIIQG 375
           G+ P+  +Y  +I G
Sbjct: 711 GIPPNSSTYDILICG 725



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 15/258 (5%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I   C  G I  A  + + M+ KG + D++T+N L++  C    L+KA 
Sbjct: 537 VKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAF 596

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V  +M     SPN  TYN  + G      + +A  L + M   G+ PN  T++ILV   
Sbjct: 597 AVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGH 656

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K G + + VK   E++       T    T  +L+  + K     QA  L  +M  + I 
Sbjct: 657 GKIGNMKECVKLYCEMITKGFVPKTR---TYNVLISCFAKGKKMSQAKELMQEMQVRGIP 713

Query: 294 TDIVAYNVLINGFC-------LNGDISSAFA-----YFCQMLKRGFLPDVITYNTLLNCL 341
            +   Y++LI G+        LN  +  ++       F +M ++GF+P   T   +   L
Sbjct: 714 PNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTL 773

Query: 342 CKQGKLDEASHFYGVLSK 359
            K GK  +A      L K
Sbjct: 774 AKPGKKADAQRILNKLYK 791


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 232/492 (47%), Gaps = 34/492 (6%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           ++ +  +   TM   G    TL  +     A+++  C  G I  AL L   M++KG  P+
Sbjct: 434 LMNKAFETYNTMLRNGFAATTLTYN-----ALLKGFCSLGSIDDALRLWFLMLKKGIAPN 488

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
            ++ + L++   K G  EKA ++ +E      + N  T+N  I G C++  + +A  L  
Sbjct: 489 EISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVD 548

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M      P+ +T+  L    CK G +  A + L E L +     T +   S I      
Sbjct: 549 KMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNE-LENLGFAPTIEFFNSLITGHFIA 607

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K   K   +    +M  + +  + VAY  LI G+C  GD+ +A+  + +M+++G +P++ 
Sbjct: 608 KQHGKVNDILF--EMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLF 665

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD--------------------------Q 366
             ++L++C  ++GK DEA+     L  T + PD                          +
Sbjct: 666 ICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAK 725

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           I +  +I GLC  G I  A+  L  + +K  V +   ++ +I G    G +  AF +RD 
Sbjct: 726 IMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDT 785

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           MLS G++ N+ T+N+LI    + G +  A SL K++   GI P+  TYN LI   C  G+
Sbjct: 786 MLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGY 845

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           I  A +L   M+  GI P + TY+ LI G C +G M+EA ++  ++    +  +++ +  
Sbjct: 846 ITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWT 905

Query: 547 LKKRYRRMKESD 558
           L + Y R +  D
Sbjct: 906 LIQGYVRCESVD 917



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 223/486 (45%), Gaps = 64/486 (13%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AVI   C  G++  A  L  +M+      ++  +N ++N  CK+G + +A +++ EM+ +
Sbjct: 354 AVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGV 413

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  +YN+ + GYC+   ++KA   ++TM  NG     +T+N L+   C  G + DA
Sbjct: 414 GVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDA 473

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++    +L    G A +++  ST L+D +FK+G   +AL LW +   + +  +   +N +
Sbjct: 474 LRLWFLML--KKGIAPNEISCST-LLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTV 530

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS----------- 351
           ING C    +  A     +M +    PD+ITY TL +  CK G +D AS           
Sbjct: 531 INGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGF 590

Query: 352 -------------HFYG-----------VLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
                        HF              +S  G++P+ ++Y  +I G C  GD+  A  
Sbjct: 591 APTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYN 650

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA-FSIRDLM------------LSFGVSS 434
             L M+EK +VP   I + ++  + R G    A   +++L+            L  G  +
Sbjct: 651 LYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVA 710

Query: 435 NV-------------FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           N                +N +I    + G I DA +L  ++   G   D FTY+ LI   
Sbjct: 711 NFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGC 770

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
              G + +A  L D ML  G+TP+I+TY  LI G C  G +  A  +F K+ T G++ + 
Sbjct: 771 SASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNA 830

Query: 542 IPFRIL 547
           I +  L
Sbjct: 831 ITYNTL 836



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 197/425 (46%), Gaps = 2/425 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  L   G +G  + +  +M + G +PD  T   +    CK+  +  A   + EM++M
Sbjct: 213 SILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKM 272

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N   Y+A + GYC V + + A  +  ++   G  PN VT+ +LV   C +  + +A
Sbjct: 273 GVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEA 332

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              + E+  +        V  + I  + Y + G    A  L N+M    +Q ++  YN++
Sbjct: 333 EGVVQEIRKNKQLVVDEAVFGAVI--NGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIM 390

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING+C  G +  A     +M   G  PD  +YN+L++  CK+G +++A   Y  + + G 
Sbjct: 391 INGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGF 450

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           A   ++Y  +++G C  G I  A      ML+K + P     + ++DG+ + G    A +
Sbjct: 451 AATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALN 510

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +    L+ G++ N  TFN +I    +   + +A  L  +M      PD+ TY  L    C
Sbjct: 511 LWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYC 570

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            +G +  A ++ +E+   G  P I  +  LI GH       +  ++  ++   GL+ + +
Sbjct: 571 KIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTV 630

Query: 543 PFRIL 547
            +  L
Sbjct: 631 AYGAL 635



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 200/437 (45%), Gaps = 23/437 (5%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP----------------SPNCATYNAF 194
           P +L H  L++ L +      A  ++  +   RP                S + A+++  
Sbjct: 120 PSLLAHAQLLHILVRARRSADARAILASLLSARPPAPPLFPHLVEVYKEFSFSAASFDLL 179

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           +       +LD AL +F  M   G R +  + N +++ L + G LG  V    ++     
Sbjct: 180 LRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM---QR 236

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
             A  D  T  I+  +Y K      AL    +M +  ++ ++VAY+ ++NG+C  G  + 
Sbjct: 237 AGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTND 296

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG-VAPDQISYKTII 373
           A      +  RGF P+++TY  L+   C +  ++EA      + K   +  D+  +  +I
Sbjct: 297 ARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVI 356

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            G C  G +  A   L  M++  +     ++N++I+GY + G +  A +I   M   GV 
Sbjct: 357 NGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVR 416

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            + +++N+L+    + G +  AF     ML +G      TYN L+   C+LG I  AL+L
Sbjct: 417 PDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRL 476

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---R 550
           +  ML++GI P+ I+ + L+ G    G  ++A  ++ +    GLA +   F  +     +
Sbjct: 477 WFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCK 536

Query: 551 YRRMKESDKARDIHQKW 567
             RM E+++  D  ++W
Sbjct: 537 IERMPEAEELVDKMKQW 553


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 204/415 (49%), Gaps = 9/415 (2%)

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           +G  PD +  N ++ ELC   D   A  +  +M+E+  + N  TY   I   C+   LD+
Sbjct: 40  RGLSPDPVELNTILAELCDARDTTTAMALFDKMAELG-AVNHTTYYNLIHPLCKARLLDE 98

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A+ L   M + G+ P  + HN+++  LC+ G L  A+    ++    +     D +T T 
Sbjct: 99  AMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM----NDAHPPDFLTYTK 154

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+    K G    A+ +  +M       D     V++   CL   +  A     +ML RG
Sbjct: 155 LVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG 214

Query: 327 FLPDVITYNTLLNCLCKQGKLDEA-SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
              + ITY+ L++ LCK  +LDEA +   G +++ G  PD ++Y T+I GLC  G +  A
Sbjct: 215 MAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA 274

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            +    M   S  P    +N +I GY R GD+  A  +   M+    + +V T+  L+ A
Sbjct: 275 VDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSA 331

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G + DA+ L ++M+ + + PDV T+  L+   C  G +  AL+L +E+ RRG  P 
Sbjct: 332 FCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 391

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           I TY  ++ G+C    +++AEE+ A  ++ G   + + + IL     R   +D+A
Sbjct: 392 IYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQA 446



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 201/426 (47%), Gaps = 14/426 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  VI  LC  G++  AL + R+M      PD LT+  LV+ L K G L  A  V++EM 
Sbjct: 118 HNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMV 176

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
             R  P+  T    +   C  + +D A  L   M + G+  N +T++ LV  LCK   L 
Sbjct: 177 SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 236

Query: 241 DAVKFL-GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           +AV  L GEV        T D++T + ++D   K G    A+ ++ +M   +     + Y
Sbjct: 237 EAVALLLGEVTRR---GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITY 290

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N LI G+C  GD+  A     +M+     PDVITY TL++  CK G+LD+A   +  +  
Sbjct: 291 NSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVA 350

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
             ++PD +++ +++ GLC  G +  A E L  +  +   P  + +N ++DGY +   +  
Sbjct: 351 NKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRK 410

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG--IFPDVFTYNLL 477
           A  +     S G   N  T+N L+    R G    A     ++  +G      V  Y ++
Sbjct: 411 AEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAII 470

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           + A C  G    A+Q Y+EM++RG  P   T+  ++   C     ++A E+  ++   G 
Sbjct: 471 LDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYG- 529

Query: 538 AIDHIP 543
              H P
Sbjct: 530 ---HTP 532



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 207/443 (46%), Gaps = 15/443 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L+  L   + M D  P       D+  +  ++  L   G++  A+ + ++M+    VPD 
Sbjct: 131 LRHALGVYRQMNDAHP------PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDN 184

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF-S 212
            T   +V  LC    ++ A  ++ EM     + N  TY+A + G C+   LD+A+ L   
Sbjct: 185 TTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLG 244

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            +   G  P+ VT++ ++  LCK G L DAV    E+            IT   L+  Y 
Sbjct: 245 EVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM------SCAPTAITYNSLIGGYC 298

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           + GD  +A+ L   M   N   D++ Y  L++ FC  G +  A+  F QM+     PDV+
Sbjct: 299 RAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVV 358

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           T+ +L++ LC +G++++A      +++ G  P   +Y  ++ G C    + KA E +   
Sbjct: 359 TFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADF 418

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG--VSSNVFTFNALILAETRGG 450
             +  VP    +N+++ G  R G    A    D + S G    ++V  +  ++ A  R G
Sbjct: 419 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDG 478

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
              DA    +EM+  G  P   T+  ++ A C       A +L +EM++ G TP   T  
Sbjct: 479 RTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCD 538

Query: 511 ELIKGHCARGNMKEAEEVFAKIQ 533
            ++  +C  G +++A+E+ ++++
Sbjct: 539 AVVSAYCRAGMIQKADELASELR 561



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 158/344 (45%), Gaps = 15/344 (4%)

Query: 232 ALCKKGLLGDA-VKFLGEVLAD---DDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           A+  +GL   A ++ LG +L D   D G +   V  +TIL +      D   A+AL++ M
Sbjct: 14  AVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAE-LCDARDTTTAMALFDKM 72

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            +         YN LI+  C    +  A      M  RG  P  + +N ++  LC+ G+L
Sbjct: 73  AELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRL 131

Query: 348 DEASHFYGVLSKTGVA--PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
               H  GV  +   A  PD ++Y  ++ GL   G +  A + L  M+    VP+     
Sbjct: 132 ---RHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLT 188

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK-KEMLL 464
           V++        + +A  + + ML  G+++N  T++AL+    +   + +A +L   E+  
Sbjct: 189 VVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTR 248

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            G  PD+ TY+ +I   C  G +  A+ +++EM      P  ITY  LI G+C  G+M E
Sbjct: 249 RGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDE 305

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           A  +  K+     A D I +  L   + +M   D A ++ Q+ +
Sbjct: 306 AIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMV 349


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 198/428 (46%), Gaps = 20/428 (4%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           +A++  +  GG  G  L L            V+  N L+  LC  G +  A+ V    + 
Sbjct: 78  LALVDSIASGGGSGKCLPL-----------PVVPCNILIKRLCSGGRVADAERV---FAT 123

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
           +  S    TYN  + GYCR   ++ A  L S M      P+  T N L+ ALC +G + D
Sbjct: 124 LGASATVVTYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRVPD 180

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+    ++L       +  V+T +IL+D+  K     QA+ L ++M  K  + DIV YNV
Sbjct: 181 ALAVFDDML---HRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNV 237

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LIN  C  GD+  A      +   G  PD +TY  +L  LC   +  E    +  ++   
Sbjct: 238 LINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNK 297

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
            APD++++ TI+  LC  G + +A + +  M E   +P+   ++ I+DG    G + +A 
Sbjct: 298 CAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAV 357

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   + S+G   +   +  ++           A  L  EM+     PD  T+N +I + 
Sbjct: 358 ELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASL 417

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C  G +  A+++ ++M   G  PDI+TY  +I G C    + +A E+ + +Q+ G   D 
Sbjct: 418 CQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDI 477

Query: 542 IPFRILKK 549
           + F  L K
Sbjct: 478 VTFNTLLK 485



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 204/432 (47%), Gaps = 5/432 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C       A+ L  +M  KG  PD++T+N L+N +C  GD+++A +++ ++      P+ 
Sbjct: 208 CKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDA 267

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TY   +   C      +   LF+ MA+N   P+ VT N +V +LC++GL+  A+K +  
Sbjct: 268 VTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDH 327

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +    +     D++T + ++D     G    A+ L + +     + D +AY  ++ G C 
Sbjct: 328 M---SEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCS 384

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
                 A     +M+     PD +T+NT++  LC++G +D A      +S+ G  PD ++
Sbjct: 385 IEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVT 444

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y +II GLC    I  A E L ++      P+   +N ++ G        +A  +   M+
Sbjct: 445 YNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMM 504

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
                 +  TFN +I +  + G +  A    K M  +G  P+  TYN+++ A    G   
Sbjct: 505 HSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQ 564

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            AL+L   M     TPD+ITY  +I      G M+EA ++   + + GL+ D I +R L 
Sbjct: 565 EALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLA 622

Query: 549 KRYRRMKESDKA 560
               R   +D+A
Sbjct: 623 YGICREDGTDRA 634



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 198/431 (45%), Gaps = 5/431 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  V++ LC   +      L  +M      PD +T N +V  LC+ G +++A  V+
Sbjct: 266 DAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVV 325

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             MSE    P+  TY++ + G C V  +D A+ L S + + G +P+ + +  ++  LC  
Sbjct: 326 DHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSI 385

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
                A + + E++  D      D +T   ++ S  + G   +A+ +   M +     DI
Sbjct: 386 EQWEHAEELMAEMVCSD---CPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDI 442

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YN +I+G C    I  A      +   G  PD++T+NTLL  LC   + ++A      
Sbjct: 443 VTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVN 502

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +  +   PD  ++ T+I  LC  G +++A E L  M E   +P    +N+++D   + G 
Sbjct: 503 MMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGK 562

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
              A  +   M +   + ++ T+N +I   T+ G + +A  L + M+ +G+ PD  TY  
Sbjct: 563 TQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRS 620

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L    C       A+++   +   G++PD   Y +++ G C       A + FA + + G
Sbjct: 621 LAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSG 680

Query: 537 LAIDHIPFRIL 547
              D   + IL
Sbjct: 681 CMPDESTYIIL 691



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 195/432 (45%), Gaps = 6/432 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G+I  A   RR +      PD  T N L+  LC  G +  A  V  +M     SP+ 
Sbjct: 141 CRAGRIEDA---RRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSV 197

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TY+  +   C+ +   +A+ L   M   G  P+ VT+N+L++A+C +G + +A+  L +
Sbjct: 198 VTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSD 257

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           + +        D +T T ++ S   +    +   L+ +M       D V +N ++   C 
Sbjct: 258 LPSH---GCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQ 314

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G +  A      M + G +PD++TY+++L+ LC  G++D+A      L   G  PD I+
Sbjct: 315 QGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIA 374

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y T+++GLC       A E +  M+     P+   +N +I    + G +  A  + + M 
Sbjct: 375 YTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMS 434

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G + ++ T+N++I        I DA  L   +   G  PD+ T+N L+   C++    
Sbjct: 435 ENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWE 494

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A QL   M+     PD  T+  +I   C +G + +A E    +   G   +   + I+ 
Sbjct: 495 DAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVV 554

Query: 549 KRYRRMKESDKA 560
               +  ++ +A
Sbjct: 555 DALLKAGKTQEA 566



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 175/421 (41%), Gaps = 40/421 (9%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + +++  LC  G++  A+ L  ++   G  PD + +  ++  LC I   E A+ ++
Sbjct: 336 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELM 395

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P+  T+N  I   C+   +D+A+ +   M+ NG  P+ VT+N ++  LC +
Sbjct: 396 AEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNE 455

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             + DA++ L  + +        D++T   L+           A  L  +M   +   D 
Sbjct: 456 RCIDDAMELLSNLQS---YGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDA 512

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             +N +I   C  G +  A      M + G +P+  TYN +++ L K GK  EA      
Sbjct: 513 TTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSG 572

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +  T   PD I+Y T+I       +I KA                             G 
Sbjct: 573 M--TNGTPDLITYNTVIS------NITKA-----------------------------GK 595

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A  +  +M+S G+S +  T+ +L     R      A  +   +   G+ PD   YN 
Sbjct: 596 MEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYND 655

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           ++   C      +A+  +  M+  G  PD  TY  L++       + EA+++   + +LG
Sbjct: 656 ILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLG 715

Query: 537 L 537
           +
Sbjct: 716 V 716



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 132/289 (45%), Gaps = 10/289 (3%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + ++I  LC    I  A+ L   +   G  PD++T N L+  LC +   E A+ ++
Sbjct: 441 DIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLM 500

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M      P+  T+N  IT  C+   L +A+     MA NG  PN+ T+NI+V AL K 
Sbjct: 501 VNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKA 560

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G   +A+K L  +        T D+IT   ++ +  K G   +AL L   M    +  D 
Sbjct: 561 GKTQEALKLLSGMT-----NGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDT 615

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + Y  L  G C       A    C++   G  PD   YN +L   C+  + D A   +  
Sbjct: 616 ITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAH 675

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL-----LSMLEKSVVPE 400
           +  +G  PD+ +Y  +++ L     + +A++ L     L +L+KS++ E
Sbjct: 676 MVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGVLDKSLIEE 724



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 155/367 (42%), Gaps = 49/367 (13%)

Query: 202 NELDKALHLFSTMANNG-----IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            E+D AL L  ++A+ G     +    V  NIL+  LC  G + DA +    V A     
Sbjct: 72  EEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAER----VFATLGAS 127

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
           AT                                     +V YN ++NG+C  G I  A 
Sbjct: 128 AT-------------------------------------VVTYNTMVNGYCRAGRIEDAR 150

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
                M    F PD  T+N L+  LC +G++ +A   +  +   G +P  ++Y  ++   
Sbjct: 151 RLISGM---PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDAT 207

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C      +A   L  M  K   P+   +NV+I+     GD+  A +I   + S G   + 
Sbjct: 208 CKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDA 267

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+  ++ +        +   L  EM  +   PD  T+N ++ + C  G +  A+++ D 
Sbjct: 268 VTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDH 327

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M   G  PDI+TY+ ++ G C  G + +A E+ +++++ G   D I +  + K    +++
Sbjct: 328 MSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQ 387

Query: 557 SDKARDI 563
            + A ++
Sbjct: 388 WEHAEEL 394



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 13/169 (7%)

Query: 84  QAVFN-ALDLILK-----ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTA 137
           Q+ +N  +D +LK     E L  L  M +  P       D   +  VI ++   GK+  A
Sbjct: 547 QSTYNIVVDALLKAGKTQEALKLLSGMTNGTP-------DLITYNTVISNITKAGKMEEA 599

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
           L L R M+  G  PD +T+  L   +C+    ++A  ++  + +M  SP+   YN  + G
Sbjct: 600 LDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLG 659

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           +C+    D A+  F+ M ++G  P+  T+ IL+ AL  + LL +A + L
Sbjct: 660 FCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLL 708


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 204/397 (51%), Gaps = 7/397 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE- 181
           +VI++LC  G++ +AL L   MI++G  PD+ TH+ L+NELCK   +++A   ++ M   
Sbjct: 379 SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRK 438

Query: 182 -MRPSPNCATYNAFITGYCRVNELDKALHLFSTM-ANNGIRPNRVTHNILVHALCKKGLL 239
               S +C +YN+ +   C+  ++ +A  +FSTM +     P+ V+++IL+   CK   L
Sbjct: 439 ISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDEL 498

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           G A K   +++   D     +V T    ++   + G    A  ++ +M       D++ Y
Sbjct: 499 GRAEKLYKQMI---DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITY 555

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           + LI+GF L      A   F  M+ RG  P+ +TYN LL+ LCK+ K DEA   +  + +
Sbjct: 556 STLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 615

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G  PD+++Y T++ G C  G I +A E    M+ K   P+   +N ++ G+ R G    
Sbjct: 616 RGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGE 675

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLI 478
           A  +  +M+S     +  + N +I   ++   + DA  + + M  D G  PD+ TYN LI
Sbjct: 676 AKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 735

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
              C    +  A++++ E+ R  ++PD   +  L++ 
Sbjct: 736 FGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 214/463 (46%), Gaps = 39/463 (8%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
            A +  LC  GKI  A    R M Q+        ++ L+  L + G ++KA+    E++ 
Sbjct: 309 TAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAG 367

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               P+  T ++ I   C+   +D AL L  TM   G  P+  TH++L++ LCK   + +
Sbjct: 368 RNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQE 427

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF-QKNIQTDIVAYN 300
           A +FL + +       +S   +   L++S  K     QA A+++ M  +++   D+V+Y+
Sbjct: 428 AQEFL-QGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYS 486

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI+GFC   ++  A   + QM+    +P+V TYN  LN L ++G++ +A   Y  +   
Sbjct: 487 ILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAA 546

Query: 361 GVAPDQISYKTII-----------------------------------QGLCIHGDIVKA 385
           G +PD I+Y T+I                                    GLC      +A
Sbjct: 547 GCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEA 606

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E    M+E+   P+   +  ++ G+   G +  A  + D M+S G   +V  +N L+  
Sbjct: 607 HELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKG 666

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR-RGITP 504
             R G   +A  L + M+     PD  ++N++I        +  A+++++ M +  G +P
Sbjct: 667 FFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSP 726

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           D++TY  LI G C    + EA +VF +I  L L+ D   F +L
Sbjct: 727 DLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVL 769



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 223/453 (49%), Gaps = 8/453 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++ +  +  K   A  L R M++ G  PD   ++Y+V   CK+ +L++A  +  EM+  
Sbjct: 239 ALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVE 298

Query: 183 RPSP-NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
             +P N   + AF++G C+  ++++A     TM    +  ++  +++L+  L + G +  
Sbjct: 299 SKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIRLLIESGRIDK 357

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A +   E+ A  + + +S    S I      K G    AL+L   M ++    D+  +++
Sbjct: 358 AEEACLEI-AGRNIQPSSGTCHSVI--QELCKAGRVDSALSLLETMIKRGYCPDMATHSM 414

Query: 302 LINGFCLNGDISSAFAYFCQMLKR--GFLPDVITYNTLLNCLCKQGKLDEA-SHFYGVLS 358
           LIN  C    I  A  +   M ++         +YN+LLN LCK  K+ +A + F  ++S
Sbjct: 415 LINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVS 474

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           +    PD +SY  +I G C   ++ +A +    M++ + VP    +N  ++G  R G ++
Sbjct: 475 ERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIA 534

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           +A  + + M++ G S +V T++ LI   +       A  L + M+  G  P+  TYN L+
Sbjct: 535 DAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLL 594

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C       A +L+ +M+ RG  PD +TYT L+ G C  G +++A EVF ++ + G  
Sbjct: 595 HGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHD 654

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            D + +  L K + R  +  +A+ + Q  + R 
Sbjct: 655 PDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQ 687



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/488 (21%), Positives = 211/488 (43%), Gaps = 48/488 (9%)

Query: 123 AVIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           AVI+ L  GG+  T   WL+ +  +     DV T+N L+++L +  DL++A  V  +M  
Sbjct: 102 AVIKHLRDGGEALTFFRWLQARNFKH----DVFTYNCLLDKLIRHRDLKQAGQVFEKMVA 157

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               PN  TY   +   C     D+A+  F  M + G +P+   +  +   L   G  G+
Sbjct: 158 QGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGE 217

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
             +  G    D + +   +++    L+ ++       +A  L+  M +   + D   Y+ 
Sbjct: 218 FSRVFGR---DLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSY 274

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLP-DVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           ++   C   ++  AF  F +M      P + + +   L+ LCK GK+++A      + ++
Sbjct: 275 MVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES 334

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            ++  Q  Y  +I+ L   G I KA E  L +  +++ P     + +I    + G + +A
Sbjct: 335 -LSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSA 393

Query: 421 FSIRDLMLSFGVSSNVFT-------------------------------------FNALI 443
            S+ + M+  G   ++ T                                     +N+L+
Sbjct: 394 LSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLL 453

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIF-PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
            +  +   +  AF++   M+ +  F PDV +Y++LI   C +  +  A +LY +M+    
Sbjct: 454 NSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 513

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            P++ TY   + G   +G + +A+ V+ ++   G + D I +  L   +   ++ D+A +
Sbjct: 514 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHE 573

Query: 563 IHQKWLLR 570
           + +  + R
Sbjct: 574 LFETMISR 581



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 127/255 (49%), Gaps = 4/255 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A +  L   G+I  A  +  +M+  G  PDV+T++ L++        ++A  +   M   
Sbjct: 522 AFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISR 581

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN  + G C+ ++ D+A  LF  M   G  P+RVT+  L++  C  G +  A
Sbjct: 582 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQA 641

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V+   E+++        DV+    L+  +F+ G   +A  L+  M  +  + D V++N++
Sbjct: 642 VEVFDEMVSKGH---DPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIM 698

Query: 303 INGFCLNGDISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           I+G      +  A   F +M +  G  PD++TYN+L+  LC + +L EA   +  + +  
Sbjct: 699 IDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLK 758

Query: 362 VAPDQISYKTIIQGL 376
           ++PD  ++  +++ +
Sbjct: 759 LSPDPHAFNVLLEAI 773



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/347 (20%), Positives = 132/347 (38%), Gaps = 80/347 (23%)

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
           DGK++       ++   + ++G   +AL  +  +  +N + D+  YN L++    + D+ 
Sbjct: 91  DGKSSCRETVGAVI--KHLRDGG--EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLK 146

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A   F +M+ +G +P+  TY  L+   C +   DEA  F+G +   G  P    Y+ + 
Sbjct: 147 QAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVT 206

Query: 374 QGL-----------------------------------CIHGDIVKAREFLLSMLEKSVV 398
           + L                                    I    ++A +   +M++    
Sbjct: 207 ECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCK 266

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS----NVFTFNALILAETRGGSIFD 454
           P+  I++ ++  + +  +L  AF    L L   V S    N   + A +    + G I  
Sbjct: 267 PDATIYSYMVLAHCKLENLDEAFK---LFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQ 323

Query: 455 AFSLKKEM-----------------LLDG-----------------IFPDVFTYNLLIGA 480
           AF   + M                 L++                  I P   T + +I  
Sbjct: 324 AFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQE 383

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            C  G +  AL L + M++RG  PD+ T++ LI   C    ++EA+E
Sbjct: 384 LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE 430



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 4/157 (2%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   +  ++   C  GKI  A+ +  +M+ KG  PDV+ +N L+    + G   +A  
Sbjct: 619 DPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQ 678

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM-ANNGIRPNRVTHNILVHAL 233
           + + M   +  P+  ++N  I G  +   LD A+ +F  M  ++G  P+ VT+N L+  L
Sbjct: 679 LFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGL 738

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           C +  L +A+K   E+   D  K + D     +L+++
Sbjct: 739 CGEQRLSEAMKVFKEI---DRLKLSPDPHAFNVLLEA 772


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 218/450 (48%), Gaps = 35/450 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AVI  LC GG +  A  + ++M   G +PDV +++ L++  C+ G +++A  V +EM   
Sbjct: 285 AVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNS 344

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  +Y+  I G+C+   +DKAL +F  M N+GI P+  +++IL+   C+KG +  A
Sbjct: 345 GILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSA 404

Query: 243 VKFLGEVLADDDGKAT--------------------------------SDVITSTILMDS 270
           +KF  E+ +++   +                                  D I    ++  
Sbjct: 405 IKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSI 464

Query: 271 YFKNGDKFQALALWNDMFQKN-IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
           Y +  D  +ALAL ++ FQ+N +  +  +YN  I+  C       A      MLKR  LP
Sbjct: 465 YCRKPDFNKALAL-SEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLP 523

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           DV+ Y+TL++C  K+   ++A   +  ++K G+  +  +Y  +I        +  A    
Sbjct: 524 DVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLF 583

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M E  V P+   +  ++ G+   G+++ A ++ D M   G S NV T+   I    + 
Sbjct: 584 KGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKL 643

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG-ITPDIIT 508
                A  L ++M   G++PD   Y +LI A CN G ++ A  L+DEM + G  TP+++ 
Sbjct: 644 NKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVM 703

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
           YT LI  +       +AE+++ +++  GL+
Sbjct: 704 YTCLINSYIKLNKRDQAEKLYEEMRAKGLS 733



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 209/439 (47%), Gaps = 3/439 (0%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I+ LC  G  G A  L + + +K    +    N ++  LC+ G L++A  V +EM     
Sbjct: 252 IKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGI 311

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+  +Y+  I G+CR   +D+A  +F  M N+GI PN  +++IL+   CK+G +  A++
Sbjct: 312 LPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALE 371

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              E+    +     DV + +IL+D + + GD   A+  W +M   N       Y  LI 
Sbjct: 372 VFEEM---KNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIK 428

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G+  +   ++A   F  M K G  PD I  N +L+  C++   ++A        + GV  
Sbjct: 429 GYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHF 488

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           +  SY   I  +C      KA + L  ML+++V+P+   ++ +I  + +  +   A  + 
Sbjct: 489 NPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLF 548

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
             M   G++ NV T+  LI        +  A+ L K M    ++PD   Y  L+   CN 
Sbjct: 549 IKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNT 608

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G +  A  L+DEM R G +P+++TYT  I  +       +A +++ K++  G+  D I +
Sbjct: 609 GEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILY 668

Query: 545 RILKKRYRRMKESDKARDI 563
            +L   +    E ++A  +
Sbjct: 669 TMLIAAFCNTGEMNRAEAL 687



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 212/468 (45%), Gaps = 54/468 (11%)

Query: 144 MIQKGTVPDVLTHNYLVNELCK-IG---DLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           +I+ G  P++ T+  ++N  C+ +G   D+ +A  ++ ++     +PN  TY  +I G C
Sbjct: 197 LIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLC 256

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +V     A  L   +       N    N +++ LC+ G+L +A +   E+    +     
Sbjct: 257 KVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEM---KNSGILP 313

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DV + +IL+D + + G   QA  ++ +M    I  +I +Y++LI+GFC  G +  A   F
Sbjct: 314 DVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVF 373

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M   G LPDV +Y+ L++  C++G +D A  F+  ++    +P   +Y ++I+G    
Sbjct: 374 EEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGY--- 430

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIW------NVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
               K+++F  ++ E  ++ +  +W      N I+  Y R  D + A ++ +     GV 
Sbjct: 431 ---YKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVH 487

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            N +++N  I    RG     A  L   ML   + PDV  Y+ LI       +   A+ L
Sbjct: 488 FNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVML 547

Query: 494 YDEMLRRGIT-----------------------------------PDIITYTELIKGHCA 518
           + +M + GIT                                   PD I YT L+ G C 
Sbjct: 548 FIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCN 607

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            G M  A  +F ++   G + + + +      Y ++ ++++A  +++K
Sbjct: 608 TGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEK 655



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 192/439 (43%), Gaps = 46/439 (10%)

Query: 152 DVLTHNYLVNELCKI----GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           DV   N + + L K+      LE A++V     +     N  + N  +      N +D  
Sbjct: 131 DVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGV 190

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKK-GLLGD---AVKFLGEVLADDDGKATSDVIT 263
             LF  +   G RPN  T+ I+++  C+  G   D   A + LG++    +   T +V+T
Sbjct: 191 RLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGE---TPNVVT 247

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
               +    K G    A  L  ++ +KN   +   +N +I G C  G +  A   F +M 
Sbjct: 248 YGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMK 307

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G LPDV +Y+ L++  C++G++D+AS  +  +  +G+ P+  SY  +I G C  G + 
Sbjct: 308 NSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVD 367

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           KA E    M    ++P+ + ++++IDG+ R GD+ +A    + M S   S + F + +LI
Sbjct: 368 KALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLI 427

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDV-------------------------------- 471
               +     +A    + M   G++PD                                 
Sbjct: 428 KGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVH 487

Query: 472 ---FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
              ++YN  I   C       ALQL   ML+R + PD++ Y+ LI     R N ++A  +
Sbjct: 488 FNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVML 547

Query: 529 FAKIQTLGLAIDHIPFRIL 547
           F K+  +G+  +   + IL
Sbjct: 548 FIKMTKVGITFNVKTYTIL 566



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 161/353 (45%), Gaps = 7/353 (1%)

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           +  + V  ++L+       +L  A      V A DDG    ++++   L+    ++    
Sbjct: 132 VEKSNVVFDMLIKVFASNSMLEHANYVF--VRAKDDG-IELNIMSCNFLLKCLVEDNRVD 188

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFC----LNGDISSAFAYFCQMLKRGFLPDVITY 334
               L+  + +   + +I  Y +++N FC     + DI  A     ++   G  P+V+TY
Sbjct: 189 GVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTY 248

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
            T +  LCK G    A      L +     +   +  +I GLC  G + +A E    M  
Sbjct: 249 GTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKN 308

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             ++P+ + ++++IDG+ R G +  A  +   M + G+  N+++++ LI    + G +  
Sbjct: 309 SGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDK 368

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  + +EM   GI PDV++Y++LI   C  G +  A++ ++EM     +P    Y  LIK
Sbjct: 369 ALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIK 428

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           G+        A + F  +Q LG+  D I    +   Y R  + +KA  + +K+
Sbjct: 429 GYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKF 481



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 124/262 (47%), Gaps = 4/262 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I  +C G     AL L   M+++  +PDV+ ++ L++   K  + EKA  +  +M+++  
Sbjct: 497 IHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGI 556

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           + N  TY   I  +    ++D A  LF  M  + + P+++ +  LV   C  G +  A  
Sbjct: 557 TFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARA 616

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              E+  +     + +V+T T  ++ Y K     QA  L+  M ++ +  D + Y +LI 
Sbjct: 617 LFDEMSREG---CSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIA 673

Query: 305 GFCLNGDISSAFAYFCQMLKRG-FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            FC  G+++ A A F +M + G   P+V+ Y  L+N   K  K D+A   Y  +   G++
Sbjct: 674 AFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLS 733

Query: 364 PDQISYKTIIQGLCIHGDIVKA 385
               S  ++ +  C    ++K 
Sbjct: 734 RLCSSEGSVSESWCCRHQVLKT 755


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 201/412 (48%), Gaps = 38/412 (9%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P   + N L++ L     ++ A+   +     R SP+  T+N  I+G C+  +L KA  +
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              +   G+ P+ VT+N ++   CK+G                                 
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRG--------------------------------- 234

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             + G  +   AL  +M +  I  + V +NVL+NG+C + + ++A   F +M ++G    
Sbjct: 235 --RAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAAS 292

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+TY+ L+  LC +GK++E       +   G+ P+  +  +++ G C  G +  A  ++ 
Sbjct: 293 VVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWID 352

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
           SM +K+V P    + +++DGY R   + +A ++++ M   GV  N   +N LI   TR G
Sbjct: 353 SMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNG 412

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
                  L  EM + G+  D+ TYN+LIGA C  G +  A++L DEML  G+ P  +TY 
Sbjct: 413 DWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYN 472

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKESDK 559
            +I G+C +GN+K A E+  +++      + + + +  K   R  +M+E+++
Sbjct: 473 TIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNE 524



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 185/411 (45%), Gaps = 41/411 (9%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           +  +++   PD+ T N +++ LCK G L KA  V +++     +P+  TYN  I GYC+ 
Sbjct: 174 KAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKR 233

Query: 202 NELDKALH---LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
               +  H   L   M   GI PN VT N+LV+  C                        
Sbjct: 234 GRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYC------------------------ 269

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
                         K+ +   A+ ++ +M Q+ I   +V Y+ L+ G C  G +      
Sbjct: 270 --------------KDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKL 315

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             +M   G +P++ T N++LN  CK+G + +A  +   + +  V P+ ++Y  ++ G   
Sbjct: 316 VDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRR 375

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
              +  A     +M  K V P   I+N +I G+ R GD  +   + D M   GV +++ T
Sbjct: 376 LDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVT 435

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N LI A    G +  A  L  EML+ G+ P   TYN +I   C  G+I  A ++   M 
Sbjct: 436 YNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRME 495

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           +     +++TY   IK  C  G M+E  E+  ++   GL  + + +  +K+
Sbjct: 496 KGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKE 546



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 185/390 (47%), Gaps = 22/390 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV---IREMS 180
           VI  LC  G++  A  + + +   G  P V+T+N +++  CK G   +  HV   ++EM 
Sbjct: 191 VISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMV 250

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   SPN  T+N  + GYC+ +    A+ +F  M   GI  + VT++ LV  LC +G + 
Sbjct: 251 EAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVE 310

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           + VK + E+    D     ++ T   +++ + K G    A    + M QKN++ ++V Y 
Sbjct: 311 EGVKLVDEM---KDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYT 367

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +L++G+     +  A A    M  +G  P+   YN L+    + G     S     +   
Sbjct: 368 ILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMK 427

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GV  D ++Y  +I  LC+ G++ KA + L  ML   + P    +N II+GY   G++ +A
Sbjct: 428 GVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSA 487

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           + IR  M      +NV T+N  I    R G + +   L  EML  G+ P+  TY+     
Sbjct: 488 YEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYD----- 542

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYT 510
                       + + M+ +G TPD+  +T
Sbjct: 543 -----------TIKEGMMEKGYTPDVRGFT 561



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 3/271 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++  LC  GK+   + L  +M   G VP++ T N ++N  CK G +  A+  I  M 
Sbjct: 296 YSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSME 355

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  TY   + GY R++++  AL +   M+  G+RPN   +N L+    + G   
Sbjct: 356 QKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWR 415

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
                L E+         +D++T  +L+ +    G+  +A+ L ++M    ++   + YN
Sbjct: 416 SVSGLLDEMRMKG---VRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYN 472

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +ING+C  G+I SA+    +M K     +V+TYN  + CLC+ GK++E +     + + 
Sbjct: 473 TIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEK 532

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           G+ P+ ++Y TI +G+   G     R F  S
Sbjct: 533 GLVPNGVTYDTIKEGMMEKGYTPDVRGFTCS 563


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 227/485 (46%), Gaps = 39/485 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I   C  G +     L ++M +K   P+V+ ++ +V+   K G L +A  V+R+M 
Sbjct: 230 YSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV 289

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN   Y   I GY + ++   AL LF  M + G+  N    +  V+ L + G + 
Sbjct: 290 QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRME 349

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +   ++++        D +  T +MD +FK G +  A  +  +M +K+   D+VAYN
Sbjct: 350 EADELFKDMMSRG---LLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYN 406

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           VLING    G   S  ++   M + G  PD  T+NT++N  CK+G L  A      +   
Sbjct: 407 VLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSY 465

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP------------------- 401
           G+ P+ I+   ++Q LC  G+I K  + L  ML     P P                   
Sbjct: 466 GLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVI 525

Query: 402 ----------------HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
                             +N +I  + R G +  A  +   M+  G+ +++ T+NALI  
Sbjct: 526 LHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHG 585

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
                 +  AF++  +ML +G+ P+V TYN+L+G       I  A  L ++M  RG+ P+
Sbjct: 586 YCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPN 645

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
             TY  L+ GH   GNMKE  +++ ++ T G       + +L   + + K+  +A+++ Q
Sbjct: 646 ATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQ 705

Query: 566 KWLLR 570
           +  +R
Sbjct: 706 EMQVR 710



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 229/492 (46%), Gaps = 43/492 (8%)

Query: 117 DYRRHV----AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           + RR V     +I   C  G+I  A+ L   M  +G  PD++T+N L+N  CKIGDL  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             ++ E+S +   PN  TY   I  YC+   L+ AL+++  M    + P+ VT+  +++ 
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LCK G + +A     E+   ++     +  +   L+DS FK G+  +A  L   M  + I
Sbjct: 132 LCKSGKVEEAKSVFREM---EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D+V Y  L++G    G  ++A   F  +L+   +P+ +TY+ L++  CK G +++   
Sbjct: 189 GFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGEL 248

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               + +  + P+ I Y +I+ G    G + +A + +  M++++++P   ++  +IDGY 
Sbjct: 249 LLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYF 308

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP--- 469
           +      A  +   M S G+  N F  ++ +    R G + +A  L K+M+  G+ P   
Sbjct: 309 KADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRV 368

Query: 470 --------------------------------DVFTYNLLIGASCNLGHIHLALQLYDEM 497
                                           DV  YN+LI     LG  + +   +  M
Sbjct: 369 NYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGM 427

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
            + G+ PD  T+  +I  +C  GN+  A ++  ++++ GL  + I   IL +R     E 
Sbjct: 428 RQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEI 487

Query: 558 DKARDIHQKWLL 569
           +K  D+    L+
Sbjct: 488 EKTMDLLNDMLV 499



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 216/462 (46%), Gaps = 39/462 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  L   G +  A  L+ +M+ +G   DV+ +  L++ L K G    A+ + + + 
Sbjct: 160 YATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLL 219

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PNC TY+A I G+C++ +++K   L   M    I PN + ++ +V    KKGLL 
Sbjct: 220 EESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLN 279

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+  + +++  +      +V     L+D YFK   +  AL L+ +M  + ++ +    +
Sbjct: 280 EAMDVMRKMVQRN---ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVID 336

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
             +N    +G +  A   F  M+ RG LPD + Y ++++   K GK  +A +    +++ 
Sbjct: 337 SFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
               D ++Y  +I GL   G   ++  F   M +  + P+   +N +I+ Y + G+L NA
Sbjct: 397 SSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNA 455

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP----------- 469
             + + M S+G+  N  T N L+      G I     L  +ML+ G  P           
Sbjct: 456 LKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA 515

Query: 470 ------------------------DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
                                   D+ TYN LI   C LG I  A  ++ +M+ +GI  D
Sbjct: 516 SSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILAD 575

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           IITY  LI G+C   ++K+A  V +++ T G++ +   + IL
Sbjct: 576 IITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNIL 617



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 187/386 (48%), Gaps = 16/386 (4%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK   A  + ++M +K +  DV+ +N L+N L K+G  E ++     M ++  +P+ AT
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSAT 438

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           +N  I  YC+   L  AL L + M + G++PN +T NILV  LC  G +   +  L ++L
Sbjct: 439 FNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDML 498

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                   +   T   ++D+  K+      L + + +    ++ D+  YN LI+ FC  G
Sbjct: 499 VMGFHPTPT---THKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLG 555

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            I  A   F  M+ +G L D+ITYN L++  C    L +A   +  +   GV+P+  +Y 
Sbjct: 556 MIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYN 615

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            ++ GL     I +A   +  M E+ +VP    +++++ G+G+ G++     +   M++ 
Sbjct: 616 ILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK 675

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI------------ 478
           G      T+N LI    +G  +  A  L +EM + GI P+  TY++LI            
Sbjct: 676 GFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPEL 735

Query: 479 GASCNLGHIHLALQLYDEMLRRGITP 504
             S    +   A +L++EM  +G  P
Sbjct: 736 NKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 186/358 (51%), Gaps = 7/358 (1%)

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           IR +    N+L+   C+ G +  AV+ L  +    +G A  D++T   LM+ + K GD F
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGM--KTEGPA-PDIVTYNTLMNGFCKIGDLF 69

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
            A  L  ++   N++ +++ Y  LI+ +C +  +  A   + +M  +  +PDV+TY  ++
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIM 129

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           N LCK GK++EA   +  + + GV P++ SY T+I  L   G++ +A      M+ + + 
Sbjct: 130 NGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIG 189

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
            +  ++  ++DG  + G  +NA  +  ++L   +  N  T++ALI    + G +     L
Sbjct: 190 FDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            +EM    IFP+V  Y+ ++      G ++ A+ +  +M++R I P++  Y  LI G+  
Sbjct: 250 LQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFK 309

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHI---PFRILKKRYRRMKESDKA-RDIHQKWLLRNK 572
                 A ++F ++++ GL  ++     F    KR  RM+E+D+  +D+  + LL ++
Sbjct: 310 ADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 190/419 (45%), Gaps = 11/419 (2%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           LD  K M+  G     LE +     + + +L   G++  A  L + M+ +G +PD + + 
Sbjct: 317 LDLFKEMKSRG-----LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYT 371

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD-KALHLFSTMAN 216
            +++   K G    A ++ +EM+E     +   YN  I G  ++ + + ++ H  + M  
Sbjct: 372 SMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFH--TGMRQ 429

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G+ P+  T N +++A CK+G LG+A+K L E+ +        + IT  IL+      G+
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG---LKPNSITCNILVQRLCAAGE 486

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             + + L NDM           +  +++    +           Q++  G   D+ TYNT
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L++  C+ G +  A+  +  +   G+  D I+Y  +I G CI   + KA      ML + 
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           V P    +N+++ G      +  A  + + M   G+  N  T++ L+    + G++ +  
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            L  EM+  G  P   TYN+LI        +  A +L  EM  RGI P+  TY  LI G
Sbjct: 667 KLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICG 725


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 209/462 (45%), Gaps = 46/462 (9%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS- 180
           + V+RD  +  K  +A++    MI+ G +P V+T N +++   K GDLE+ D +  EM  
Sbjct: 210 LKVLRDSRMMNK-ASAVY--ETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266

Query: 181 -------------------------------EMRPSPNCAT---YNAFITGYCRVNELDK 206
                                          +MR S    T   +N  I GYC+    D 
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDD 326

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A  +   M N GI P   T+NI + ALC  G + DA + L  +       A  DV++   
Sbjct: 327 AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM-------AAPDVVSYNT 379

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           LM  Y K G   +A  L++D+   +I   IV YN LI+G C +G++  A     +M  + 
Sbjct: 380 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PDVITY TL+    K G L  A+  Y  + + G+ PD  +Y T   G    GD  KA 
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 499

Query: 387 EFLLSMLEKS-VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
                M+      P+  I+NV IDG  + G+L  A   +  +   G+  +  T+  +I  
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
               G    A +L  EML   ++P V TY +LI      G +  A Q   EM +RG+ P+
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++T+  L+ G C  GN+ EA     K++  G+  +   + +L
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 661



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 190/392 (48%), Gaps = 8/392 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G    A  +  +M+  G  P   T+N  +  LC  G ++ A  ++  M+   
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA--- 370

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  +YN  + GY ++ +  +A  LF  +    I P+ VT+N L+  LC+ G L  A 
Sbjct: 371 -APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ 429

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+          DVIT T L+  + KNG+   A  ++++M +K I+ D  AY    
Sbjct: 430 RLKEEMTTQ---LIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486

Query: 304 NGFCLNGDISSAFAYFCQMLKRGF-LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            G    GD   AF    +M+      PD+  YN  ++ LCK G L +A  F   + + G+
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y T+I+G   +G    AR     ML K + P    + V+I G+ + G L  AF 
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
               M   GV  NV T NAL+    + G+I +A+    +M  +GI P+ ++Y +LI  +C
Sbjct: 607 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 666

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           +       ++LY EML + I PD  T+  L K
Sbjct: 667 DFEKWEEVVKLYKEMLDKEIEPDGYTHRALFK 698



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 182/407 (44%), Gaps = 43/407 (10%)

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
           Y + +  +K L  F  M   G  P+    NI++  L    ++  A      ++   +   
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMI---EHGI 234

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
              VIT   ++DS FK GD  +   +W +M ++NI+   V YN+LINGF  NG +  A  
Sbjct: 235 MPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARR 294

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
           +   M + GF     ++N L+   CKQG  D+A      +   G+ P   +Y   I  LC
Sbjct: 295 FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC 354

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G I  ARE L SM    VV     +N ++ GY + G    A  + D + +  +  ++ 
Sbjct: 355 DFGRIDDARELLSSMAAPDVVS----YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIV 410

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T+N LI      G++  A  LK+EM    IFPDV TY  L+      G++ +A ++YDEM
Sbjct: 411 TYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM 470

Query: 498 LRRGITPDIITYT-----EL-------------------------------IKGHCARGN 521
           LR+GI PD   YT     EL                               I G C  GN
Sbjct: 471 LRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGN 530

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           + +A E   KI  +GL  DH+ +  + + Y    +   AR+++ + L
Sbjct: 531 LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 65/140 (46%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L  D+  +  VIR     G+   A  L  +M++K   P V+T+  L+    K G LE
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A     EM +    PN  T+NA + G C+   +D+A      M   GI PN+ ++ +L+
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662

Query: 231 HALCKKGLLGDAVKFLGEVL 250
              C      + VK   E+L
Sbjct: 663 SKNCDFEKWEEVVKLYKEML 682


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 214/457 (46%), Gaps = 38/457 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ L    +IG A ++ ++M +KG  P+V+ +N L++   + G L KA  +   M    
Sbjct: 325 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 384

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            S   +TYN  I GYC+  + D A  L   M + G   N+ +   ++  LC   +   A+
Sbjct: 385 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 444

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +F+GE+L  +       + T   L+    K+G   +AL LW     K    D    N L+
Sbjct: 445 RFVGEMLLRNMSPGGGLLTT---LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 501

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF---------- 353
           +G C  G +  AF    ++L RG + D ++YNTL++  C + KLDEA  F          
Sbjct: 502 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 561

Query: 354 -----YGVL--------------------SKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
                Y +L                     + G+ PD  +Y  +I G C      + +EF
Sbjct: 562 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 621

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              M+ K+V P   ++N +I  Y R G LS A  +R+ M   G+S N  T+ +LI   + 
Sbjct: 622 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 681

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
              + +A  L +EM ++G+ P+VF Y  LI     LG +     L  EM  + + P+ IT
Sbjct: 682 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 741

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           YT +I G+   GN+ EA  +  +++  G+  D I ++
Sbjct: 742 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 778



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 223/460 (48%), Gaps = 19/460 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            VI  L + G+   A   + KM+++G  P ++T++ LV  L +   +  A  V++EM++ 
Sbjct: 289 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 348

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   YN  I  +     L+KA+ +   M + G+     T+N L+   CK G   +A
Sbjct: 349 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 408

Query: 243 VKFLGEVLA----DDDGKATSDV--ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
            + L E+L+     + G  TS +  + S ++ DS         AL    +M  +N+    
Sbjct: 409 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS---------ALRFVGEMLLRNMSPGG 459

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
                LI+G C +G  S A   + Q L +GF+ D  T N LL+ LC+ GKLDEA      
Sbjct: 460 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 519

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G   D++SY T+I G C    + +A  FL  M+++ + P+ + ++++I G      
Sbjct: 520 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 579

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A    D     G+  +V+T++ +I    +     +      EM+   + P+   YN 
Sbjct: 580 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 639

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI A C  G + +AL+L ++M  +GI+P+  TYT LIKG      ++EA+ +F +++  G
Sbjct: 640 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 699

Query: 537 LAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRNK 572
           L  +   +  L   Y ++ +  K     R++H K +  NK
Sbjct: 700 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 739



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 195/422 (46%), Gaps = 3/422 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           ++ KG  PDV      +N  CK G +E+A  +  +M E   +PN  T+N  I G      
Sbjct: 240 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 299

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            D+A      M   G+ P  +T++ILV  L +   +GDA   L E+          +VI 
Sbjct: 300 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG---FPPNVIV 356

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              L+DS+ + G   +A+ + + M  K +      YN LI G+C NG   +A     +ML
Sbjct: 357 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 416

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             GF  +  ++ +++  LC     D A  F G +    ++P      T+I GLC HG   
Sbjct: 417 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 476

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           KA E     L K  V +    N ++ G    G L  AF I+  +L  G   +  ++N LI
Sbjct: 477 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 536

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                   + +AF    EM+  G+ PD +TY++LI    N+  +  A+Q +D+  R G+ 
Sbjct: 537 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 596

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PD+ TY+ +I G C     +E +E F ++ +  +  + + +  L + Y R      A ++
Sbjct: 597 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 656

Query: 564 HQ 565
            +
Sbjct: 657 RE 658



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 149/334 (44%), Gaps = 39/334 (11%)

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           AL +F  +AN G+ P++ T NIL+ +L +                               
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVR------------------------------- 227

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
                    ++FQ      D+  K +  D+  +   IN FC  G +  A   F +M + G
Sbjct: 228 --------ANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 279

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+V+T+NT+++ L   G+ DEA  F   + + G+ P  I+Y  +++GL     I  A 
Sbjct: 280 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 339

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             L  M +K   P   ++N +ID +   G L+ A  I+DLM+S G+S    T+N LI   
Sbjct: 340 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 399

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G   +A  L KEML  G   +  ++  +I   C+      AL+   EML R ++P  
Sbjct: 400 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 459

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
              T LI G C  G   +A E++ +    G  +D
Sbjct: 460 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 493



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 148/310 (47%), Gaps = 3/310 (0%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
            D R   A++  LC  GK+  A  ++++++ +G V D +++N L++  C    L++A   
Sbjct: 492 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 551

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           + EM +    P+  TY+  I G   +N++++A+  +     NG+ P+  T+++++   CK
Sbjct: 552 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 611

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
                +  +F  E+++ +      + +    L+ +Y ++G    AL L  DM  K I  +
Sbjct: 612 AERTEEGQEFFDEMMSKN---VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 668

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
              Y  LI G  +   +  A   F +M   G  P+V  Y  L++   K G++ +      
Sbjct: 669 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 728

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +    V P++I+Y  +I G    G++ +A   L  M EK +VP+   +   I GY + G
Sbjct: 729 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 788

Query: 416 DLSNAFSIRD 425
            +  AF   D
Sbjct: 789 GVLEAFKGSD 798



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 13/230 (5%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           + G +PDV T++ +++  CK    E+      EM      PN   YN  I  YCR   L 
Sbjct: 592 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 651

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
            AL L   M + GI PN  T+  L+  +     + +A     E+  +       +V   T
Sbjct: 652 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG---LEPNVFHYT 708

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            L+D Y K G   +   L  +M  KN+  + + Y V+I G+  +G+++ A     +M ++
Sbjct: 709 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 768

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           G +PD ITY   +    KQG + EA  F G         D+ +Y  II+G
Sbjct: 769 GIVPDSITYKEFIYGYLKQGGVLEA--FKG--------SDEENYAAIIEG 808


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 185/385 (48%), Gaps = 38/385 (9%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           ++  G  P+    N L+ ++ + G L  A +V  EM      P   T+N  ++G C+ ++
Sbjct: 105 LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD 164

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           L+ A  L   MA  GI P+  T+   +  LCK G + DA++   E+    +     + + 
Sbjct: 165 LNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMC---ERGLNPNTVV 221

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            T L+D++ K GD    L L  +M  + ++ D+VAYN L+NGFC   D+ +A     +M 
Sbjct: 222 LTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMR 281

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           K G  PD +TY TL++  CK+G+LD A      +S  GVA D ++Y  +I GL   G  V
Sbjct: 282 KDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSV 341

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A   L  M+E  + P+   + ++ID + + GD+   F                      
Sbjct: 342 DAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFK--------------------- 380

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                         LK EM   G  P + TYN+++   C+LG +  A  L + ML  G+ 
Sbjct: 381 -------------HLK-EMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVC 426

Query: 504 PDIITYTELIKGHCARGNMKEAEEV 528
           P+ ITY  L+ GHC  G +++ EE+
Sbjct: 427 PNDITYNILLDGHCKHGKVRDTEEL 451



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 176/362 (48%), Gaps = 6/362 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           + R+   ++RD+   GK+ +A  +  +M+++G  P V+T N L++ +CK  DL  A+ + 
Sbjct: 113 EARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALR 172

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M++   +P+  TY AFI G C+   +  A+ +F  M   G+ PN V    L+ A CK+
Sbjct: 173 GLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKE 232

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G +   ++   E+         +D++    L++ + +  D   A  +  +M +  ++ D 
Sbjct: 233 GDVTAGLELRWEMATRG---VKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDK 289

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  LI+G C  G++ +A     +M   G   D +TY  L++ L K G+  +A      
Sbjct: 290 VTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCE 349

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + + G+ PD  +Y  +I   C +GD+    + L  M  K   P    +NV+++G+   G 
Sbjct: 350 MMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQ 409

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           + NA  + + ML+ GV  N  T+N L+    + G + D   LK      G+  D   Y  
Sbjct: 410 MKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKSA---KGMVSDFGVYTS 466

Query: 477 LI 478
           LI
Sbjct: 467 LI 468



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 159/348 (45%), Gaps = 3/348 (0%)

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R+  + +A   +  + + G+ P     N+L+  + + G L  A     E+L         
Sbjct: 91  RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRG---VQP 147

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
            V+T   LM    K  D   A AL   M +  I  D+  Y   I G C  G I  A   F
Sbjct: 148 TVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMF 207

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M +RG  P+ +   TL++  CK+G +         ++  GV  D ++Y  ++ G C  
Sbjct: 208 EEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRV 267

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
            D+  A + +  M +  + P+   +  +IDG  + G+L  A  ++  M   GV+ +  T+
Sbjct: 268 RDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTY 327

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
            ALI   ++ G   DA  +  EM+  G+ PD  TY ++I A C  G +    +   EM  
Sbjct: 328 TALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQN 387

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +G  P I+TY  ++ G C+ G MK A+ +   +  +G+  + I + IL
Sbjct: 388 KGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNIL 435



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 3/244 (1%)

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L+RG    +  ++ L+N L     + EA  FY  L   GV P+   +  +++ +   G +
Sbjct: 74  LRRGIRVPMPAWSDLMNRL---PSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKL 130

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             AR     ML + V P    +N ++ G  +  DL+NA ++R LM   G++ +V+T+ A 
Sbjct: 131 ASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAF 190

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    + G I DA  + +EM   G+ P+      LI A C  G +   L+L  EM  RG+
Sbjct: 191 IQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGV 250

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             D++ Y  L+ G C   +MK A ++  +++  GL  D + +  L     +  E D A +
Sbjct: 251 KADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAME 310

Query: 563 IHQK 566
           + Q+
Sbjct: 311 MKQE 314



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 11/213 (5%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           +K   D ++ MR  G     L+ D   +  +I   C  G++ TA+ ++++M  +G   D 
Sbjct: 270 MKAANDIVEEMRKDG-----LKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDD 324

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+  L++ L K G    A+ ++ EM E    P+  TY   I  +C+  ++         
Sbjct: 325 VTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKE 384

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M N G  P  VT+N++++  C  G + +A   L  +L  + G   +D IT  IL+D + K
Sbjct: 385 MQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAML--NIGVCPND-ITYNILLDGHCK 441

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
           +G       L +    K + +D   Y  LIN F
Sbjct: 442 HGKVRDTEELKS---AKGMVSDFGVYTSLINEF 471


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 201/399 (50%), Gaps = 6/399 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           K+++ G  PD+ T   L+N  C    +E+A  ++ +M EM   P+   Y   I   C+  
Sbjct: 131 KLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNG 190

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            +D AL LF+ M N GIRP+ V +  LV+ LC  G   DA   L  ++     K   DVI
Sbjct: 191 HVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKR---KIKPDVI 247

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   L+D++ K G    A  L+N+M Q +I  +I  Y  LING C+ G +  A   F  M
Sbjct: 248 TFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLM 307

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
             +G  PDV+ Y +L+N  CK  K+++A   +  +S+ G+  + I+Y T+IQG  + G  
Sbjct: 308 ETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKP 367

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF---GVSSNVFTF 439
             A+E    M+ + V P    +NV++      G ++ A  I + M      GV  N+ T+
Sbjct: 368 NVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTY 427

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N L+      G +  A  +  +M    +   + TY ++I   C  G +  AL L+  +  
Sbjct: 428 NVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPS 487

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
           +G+ P+++TYT +I G    G M EA  +F K++  G++
Sbjct: 488 KGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 209/445 (46%), Gaps = 46/445 (10%)

Query: 92  LILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           L   E LD    M ++ P+   +  D+ R + VI  +    K    + L + +   G   
Sbjct: 50  LQFNEALDLFSHMVESRPLPSII--DFTRLLNVIAKM---KKFDVVINLCKHLQIMGVSN 104

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D+ T N L+N  C+      A   + ++ ++   P+  T+ + I G+C  N +++A+ + 
Sbjct: 105 DLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMV 164

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
           + M   GI+P                                      DV+  T ++DS 
Sbjct: 165 NQMVEMGIKP--------------------------------------DVVIYTTIIDSL 186

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            KNG    AL+L+N M    I+ D+V Y  L+NG C +G    A      M+KR   PDV
Sbjct: 187 CKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDV 246

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           IT+N L++   K+GKL +A   Y  + +  +AP+  +Y ++I GLC+ G + +AR+    
Sbjct: 247 ITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYL 306

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M  K   P+   +  +I+G+ +C  + +A  I   M   G++ N  T+  LI      G 
Sbjct: 307 METKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGK 366

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR---GITPDIIT 508
              A  +   M+  G+ P++ TYN+L+   C  G ++ AL ++++M +R   G+ P+I T
Sbjct: 367 PNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRT 426

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  L+ G C  G +++A  VF  +Q
Sbjct: 427 YNVLLHGLCYNGKLEKALMVFGDMQ 451



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 171/345 (49%), Gaps = 3/345 (0%)

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           + ++AL LFS M  +   P+ +    L++ + K       +     +        ++D+ 
Sbjct: 51  QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHL---QIMGVSNDLY 107

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T  +LM+ + ++     A +    + +   + DI  +  LINGFCL   I  A +   QM
Sbjct: 108 TCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQM 167

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           ++ G  PDV+ Y T+++ LCK G +D A   +  +   G+ PD + Y +++ GLC  G  
Sbjct: 168 VEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRW 227

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A   L  M+++ + P+   +N +ID + + G L +A  + + M+   ++ N+FT+ +L
Sbjct: 228 RDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSL 287

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I      G + +A  +   M   G FPDV  Y  LI   C    +  A++++ EM ++G+
Sbjct: 288 INGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGL 347

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           T + ITYT LI+G    G    A+EVF  + + G+  +   + +L
Sbjct: 348 TGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVL 392



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 180/361 (49%), Gaps = 6/361 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   ++ D   +  +I  LC  G +  AL L  +M   G  PDV+ +  LVN LC  G  
Sbjct: 168 VEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRW 227

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             AD ++R M + +  P+  T+NA I  + +  +L  A  L++ M    I PN  T+  L
Sbjct: 228 RDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSL 287

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           ++ LC +G L +A +     L +  G    DV+  T L++ + K      A+ ++ +M Q
Sbjct: 288 INGLCMEGRLDEARQMF--YLMETKG-CFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQ 344

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K +  + + Y  LI GF L G  + A   F  M+ RG  P++ TYN LL+CLC  GK+++
Sbjct: 345 KGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNK 404

Query: 350 ASHFYGVLSKT---GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           A   +  + K    GV P+  +Y  ++ GLC +G + KA      M ++ +      + +
Sbjct: 405 ALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTI 464

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           II G  + G + +A ++   + S GV  NV T+  +I    R G + +A  L ++M  DG
Sbjct: 465 IIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDG 524

Query: 467 I 467
           +
Sbjct: 525 V 525



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 154/323 (47%), Gaps = 6/323 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   + +++  LC  G+   A  L R M+++   PDV+T N L++   K G L  A 
Sbjct: 207 IRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAK 266

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM +M  +PN  TY + I G C    LD+A  +F  M   G  P+ V +  L++  
Sbjct: 267 ELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGF 326

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   + DA+K   E+        T + IT T L+  +   G    A  ++  M  + + 
Sbjct: 327 CKCKKVEDAMKIFYEM---SQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVP 383

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKR---GFLPDVITYNTLLNCLCKQGKLDEA 350
            +I  YNVL++  C NG ++ A   F  M KR   G  P++ TYN LL+ LC  GKL++A
Sbjct: 384 PNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKA 443

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +G + K  +    I+Y  IIQG+C  G +  A     S+  K V P    +  +I G
Sbjct: 444 LMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISG 503

Query: 411 YGRCGDLSNAFSIRDLMLSFGVS 433
             R G +  A  +   M   GVS
Sbjct: 504 LFREGLMLEAHVLFRKMKEDGVS 526



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 139/285 (48%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +AL L++ M +      I+ +  L+N                 +   G   D+ T N L+
Sbjct: 54  EALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLM 113

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           NC C+  +   AS F G L K G  PD  ++ ++I G C+   I +A   +  M+E  + 
Sbjct: 114 NCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIK 173

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P+  I+  IID   + G + NA S+ + M ++G+  +V  + +L+      G   DA  L
Sbjct: 174 PDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLL 233

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            + M+   I PDV T+N LI A    G +  A +LY+EM++  I P+I TYT LI G C 
Sbjct: 234 LRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCM 293

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            G + EA ++F  ++T G   D + +  L   + + K+ + A  I
Sbjct: 294 EGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKI 338



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 143/280 (51%), Gaps = 5/280 (1%)

Query: 87  FNAL-DLILKEN--LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRK 143
           FNAL D  +KE   LD  +   +   ++ ++  +   + ++I  LC+ G++  A  +   
Sbjct: 249 FNALIDAFVKEGKLLDAKELYNEM--IQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYL 306

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M  KG  PDV+ +  L+N  CK   +E A  +  EMS+   + N  TY   I G+  V +
Sbjct: 307 METKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGK 366

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            + A  +F  M + G+ PN  T+N+L+H LC  G +  A+    ++   +      ++ T
Sbjct: 367 PNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRT 426

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             +L+     NG   +AL ++ DM ++++   I+ Y ++I G C  G +  A   FC + 
Sbjct: 427 YNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLP 486

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            +G  P+V+TY T+++ L ++G + EA   +  + + GV+
Sbjct: 487 SKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 141/293 (48%), Gaps = 6/293 (2%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
           G ++  ++ D     A+I      GK+  A  L  +MIQ    P++ T+  L+N LC  G
Sbjct: 236 GMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEG 295

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
            L++A  +   M      P+   Y + I G+C+  +++ A+ +F  M+  G+  N +T+ 
Sbjct: 296 RLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYT 355

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            L+      G    A +  G +++        ++ T  +L+     NG   +AL ++ DM
Sbjct: 356 TLIQGFGLVGKPNVAQEVFGHMVSRG---VPPNIRTYNVLLHCLCYNGKVNKALMIFEDM 412

Query: 288 FQKNIQ---TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
            ++ I     +I  YNVL++G C NG +  A   F  M KR     +ITY  ++  +CK 
Sbjct: 413 QKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKA 472

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           GK+ +A + +  L   GV P+ ++Y T+I GL   G +++A      M E  V
Sbjct: 473 GKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 35/256 (13%)

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           + A   F  M++   LP +I +  LLN + K  K D   +    L   GV+ D  +   +
Sbjct: 53  NEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLL 112

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           +   C       A  FL                      G+             ++  G 
Sbjct: 113 MNCFCQSSQPCLASSFL----------------------GK-------------LMKLGF 137

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             ++FTF +LI     G  I +A S+  +M+  GI PDV  Y  +I + C  GH+  AL 
Sbjct: 138 EPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALS 197

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           L+++M   GI PD++ YT L+ G C  G  ++A+ +   +    +  D I F  L   + 
Sbjct: 198 LFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFV 257

Query: 553 RMKESDKARDIHQKWL 568
           +  +   A++++ + +
Sbjct: 258 KEGKLLDAKELYNEMI 273


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 214/457 (46%), Gaps = 38/457 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ L    +IG A ++ ++M +KG  P+V+ +N L++   + G L KA  +   M    
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            S   +TYN  I GYC+  + D A  L   M + G   N+ +   ++  LC   +   A+
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +F+GE+L  +       + T   L+    K+G   +AL LW     K    D    N L+
Sbjct: 456 RFVGEMLLRNMSPGGGLLTT---LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF---------- 353
           +G C  G +  AF    ++L RG + D ++YNTL++  C + KLDEA  F          
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572

Query: 354 -----YGVL--------------------SKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
                Y +L                     + G+ PD  +Y  +I G C      + +EF
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              M+ K+V P   ++N +I  Y R G LS A  +R+ M   G+S N  T+ +LI   + 
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
              + +A  L +EM ++G+ P+VF Y  LI     LG +     L  EM  + + P+ IT
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           YT +I G+   GN+ EA  +  +++  G+  D I ++
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 789



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 223/460 (48%), Gaps = 19/460 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            VI  L + G+   A   + KM+++G  P ++T++ LV  L +   +  A  V++EM++ 
Sbjct: 300 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 359

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   YN  I  +     L+KA+ +   M + G+     T+N L+   CK G   +A
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419

Query: 243 VKFLGEVLA----DDDGKATSDV--ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
            + L E+L+     + G  TS +  + S ++ DS         AL    +M  +N+    
Sbjct: 420 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS---------ALRFVGEMLLRNMSPGG 470

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
                LI+G C +G  S A   + Q L +GF+ D  T N LL+ LC+ GKLDEA      
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G   D++SY T+I G C    + +A  FL  M+++ + P+ + ++++I G      
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A    D     G+  +V+T++ +I    +     +      EM+   + P+   YN 
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI A C  G + +AL+L ++M  +GI+P+  TYT LIKG      ++EA+ +F +++  G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710

Query: 537 LAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRNK 572
           L  +   +  L   Y ++ +  K     R++H K +  NK
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 195/422 (46%), Gaps = 3/422 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           ++ KG  PDV      +N  CK G +E+A  +  +M E   +PN  T+N  I G      
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            D+A      M   G+ P  +T++ILV  L +   +GDA   L E+          +VI 
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG---FPPNVIV 367

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              L+DS+ + G   +A+ + + M  K +      YN LI G+C NG   +A     +ML
Sbjct: 368 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             GF  +  ++ +++  LC     D A  F G +    ++P      T+I GLC HG   
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 487

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           KA E     L K  V +    N ++ G    G L  AF I+  +L  G   +  ++N LI
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                   + +AF    EM+  G+ PD +TY++LI    N+  +  A+Q +D+  R G+ 
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 607

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PD+ TY+ +I G C     +E +E F ++ +  +  + + +  L + Y R      A ++
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667

Query: 564 HQ 565
            +
Sbjct: 668 RE 669



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 149/334 (44%), Gaps = 39/334 (11%)

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           AL +F  +AN G+ P++ T NIL+ +L +                               
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVR------------------------------- 238

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
                    ++FQ      D+  K +  D+  +   IN FC  G +  A   F +M + G
Sbjct: 239 --------ANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 290

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+V+T+NT+++ L   G+ DEA  F   + + G+ P  I+Y  +++GL     I  A 
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 350

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             L  M +K   P   ++N +ID +   G L+ A  I+DLM+S G+S    T+N LI   
Sbjct: 351 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G   +A  L KEML  G   +  ++  +I   C+      AL+   EML R ++P  
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 470

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
              T LI G C  G   +A E++ +    G  +D
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 148/310 (47%), Gaps = 3/310 (0%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
            D R   A++  LC  GK+  A  ++++++ +G V D +++N L++  C    L++A   
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           + EM +    P+  TY+  I G   +N++++A+  +     NG+ P+  T+++++   CK
Sbjct: 563 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
                +  +F  E+++ +      + +    L+ +Y ++G    AL L  DM  K I  +
Sbjct: 623 AERTEEGQEFFDEMMSKN---VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 679

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
              Y  LI G  +   +  A   F +M   G  P+V  Y  L++   K G++ +      
Sbjct: 680 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 739

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +    V P++I+Y  +I G    G++ +A   L  M EK +VP+   +   I GY + G
Sbjct: 740 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799

Query: 416 DLSNAFSIRD 425
            +  AF   D
Sbjct: 800 GVLEAFKGSD 809



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 13/230 (5%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           + G +PDV T++ +++  CK    E+      EM      PN   YN  I  YCR   L 
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
            AL L   M + GI PN  T+  L+  +     + +A     E+  +       +V   T
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG---LEPNVFHYT 719

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            L+D Y K G   +   L  +M  KN+  + + Y V+I G+  +G+++ A     +M ++
Sbjct: 720 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           G +PD ITY   +    KQG + EA  F G         D+ +Y  II+G
Sbjct: 780 GIVPDSITYKEFIYGYLKQGGVLEA--FKG--------SDEENYAAIIEG 819


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 211/451 (46%), Gaps = 18/451 (3%)

Query: 90  LDLILKENL-----DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKM 144
           LD +L+ENL          MR  G     +E +   +  +I+ LC   ++G A  +  +M
Sbjct: 134 LDALLRENLVAAVVPVYDNMRKAG-----VEPNVYTYNLLIKALCQNDRVGAARRMLDEM 188

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
            +KG  PD ++H  +++ LCK+  L++A  ++ EM+     P  A+YNA +   C    +
Sbjct: 189 ARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMT-----PVGASYNAVVHALCGQFRM 243

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
            +   +   M + G+RP+ V +  +V A CK   L  A   L  ++ +       +V T 
Sbjct: 244 REVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEG---CVPNVQTF 300

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T+L+  +F +G    AL +WN M  +      ++YNVLI G C  GD+  A   F  M K
Sbjct: 301 TVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGK 360

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
              LPDV TY+TL++   K G LD A   +  ++  G  P+ + Y  ++  LC      +
Sbjct: 361 SDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQ 420

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A   +  M  ++  P    +N +I      G    A ++   M  +G   N  T+N L+ 
Sbjct: 421 AENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLH 480

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              R G+  DA  +  EML  G    + +YN  I   C +  I  A+ L   M+ +GI P
Sbjct: 481 GLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQP 540

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           D  T+  +I  +C  GN++ A  +  ++  +
Sbjct: 541 DAFTFNAIIHAYCKEGNVRAAAWMLGRMDAV 571



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 217/467 (46%), Gaps = 20/467 (4%)

Query: 89  ALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVA-----VIRDLCLGGKIGTA-----L 138
           AL    +  + RL    D   V+ TL+    R VA     ++  +C   + G A      
Sbjct: 53  ALARAHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKT 112

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
           + R +       P V  +N+L++ L +   +     V   M +    PN  TYN  I   
Sbjct: 113 FYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKAL 172

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           C+ + +  A  +   MA  G RP+ V+H  ++ ALCK   L +A   L E+     G + 
Sbjct: 173 CQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM--TPVGASY 230

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           + V+ +   +   F+  + F  +   ++M  + ++ D VAY  ++  FC   ++  A A 
Sbjct: 231 NAVVHA---LCGQFRMREVFLVV---DEMVHRGLRPDTVAYTSIVGAFCKARELRMACAI 284

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             +M+  G +P+V T+  L+      GK+ +A   +  +   G AP  ISY  +I+GLC 
Sbjct: 285 LARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCH 344

Query: 379 HGDIVKAREFLLSMLEKS-VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
            GD+ +A  F+ S + KS  +P+   ++ +IDG+ + GDL  A SI + M + G   NV 
Sbjct: 345 IGDLKRAL-FVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVV 403

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            +  ++    +      A +L  +M L+   P+  T+N LI + C+LG    AL ++  M
Sbjct: 404 VYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGM 463

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            R G  P+  TY EL+ G    GN ++A  +  ++   G  +  + +
Sbjct: 464 RRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSY 510



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 143/311 (45%), Gaps = 32/311 (10%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  AL +   M+ +G  P  +++N L+  LC IGDL++A  V   M +    P+  TY
Sbjct: 311 GKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTY 370

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  I G+ +  +LD A+ +++ M N G +PN V +  +V  LCKK +   A   + ++  
Sbjct: 371 STLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSL 430

Query: 252 D-----------------DDGKATSDV---------------ITSTILMDSYFKNGDKFQ 279
           +                 D G+A   +                T   L+   F+ G+   
Sbjct: 431 ENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCED 490

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           AL +  +M     +  +V+YN  I+G C    I  A     +M+ +G  PD  T+N +++
Sbjct: 491 ALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIH 550

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             CK+G +  A+   G +       + ++Y +++ GLC    +  A  +LL ML + + P
Sbjct: 551 AYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICP 610

Query: 400 EPHIWNVIIDG 410
               WNV++ G
Sbjct: 611 NEATWNVLVRG 621



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 179/426 (42%), Gaps = 42/426 (9%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           LDRL   R        +   Y    AV+  LC   ++     +  +M+ +G  PD + + 
Sbjct: 210 LDRLDEARGILAEMTPVGASYN---AVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYT 266

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            +V   CK  +L  A  ++  M      PN  T+   + G+    ++  AL +++ M   
Sbjct: 267 SIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAE 326

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G  P+ +++N+L+  LC  G L  A+ F+   +   D     DV T + L+D + K GD 
Sbjct: 327 GWAPSTISYNVLIRGLCHIGDLKRAL-FVFSCMGKSD--CLPDVRTYSTLIDGFSKAGDL 383

Query: 278 FQALALWNDMFQKNIQTDIVAY-----------------------------------NVL 302
             A+++WNDM     + ++V Y                                   N L
Sbjct: 384 DVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTL 443

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I   C  G    A   F  M + G  P+  TYN LL+ L ++G  ++A      +   G 
Sbjct: 444 IRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGF 503

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
               +SY T I GLC    I +A   L  M+ + + P+   +N II  Y + G++  A  
Sbjct: 504 ELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAW 563

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI-GAS 481
           +   M +     N+  + +L+        + DA     +ML +GI P+  T+N+L+ G  
Sbjct: 564 MLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIF 623

Query: 482 CNLGHI 487
            +LG I
Sbjct: 624 THLGTI 629



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 162/363 (44%), Gaps = 21/363 (5%)

Query: 184 PSPNCA-----TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           P+PN        + A +       +LD   +    M   G+         LV A+C    
Sbjct: 46  PAPNAGEALARAHEATVRRLAAAGDLDGVQYTLQEMRLRGVA---CPEGALVAAICAFAR 102

Query: 239 LGDAVKFLGEVLA--DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
            G A + L        D G A   V     L+D+  +       + ++++M +  ++ ++
Sbjct: 103 AGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNV 162

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             YN+LI   C N  + +A     +M ++G  PD +++ T+++ LCK  +LDEA    G+
Sbjct: 163 YTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEAR---GI 219

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL---SMLEKSVVPEPHIWNVIIDGYGR 413
           L++  + P   SY  ++  LC      + RE  L    M+ + + P+   +  I+  + +
Sbjct: 220 LAE--MTPVGASYNAVVHALCGQ---FRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCK 274

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             +L  A +I   M++ G   NV TF  L+      G + DA  +   M+ +G  P   +
Sbjct: 275 ARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTIS 334

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN+LI   C++G +  AL ++  M +    PD+ TY+ LI G    G++  A  ++  + 
Sbjct: 335 YNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMT 394

Query: 534 TLG 536
             G
Sbjct: 395 NAG 397


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 203/428 (47%), Gaps = 3/428 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   + AV+R LC+  + G    L  +M+  G  P+++T + L+  LC+ G  E+   
Sbjct: 214 EPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHE 273

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V  +M+E   +P+   Y   I G C+   L+ A  + + M + G+ PN V +N L+  LC
Sbjct: 274 VHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLC 333

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
                 +A   L E+    D     D +T  IL+D   +NG   + + +   M +     
Sbjct: 334 SADRWEEAEGLLAEMF---DKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMP 390

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D++ Y  +INGFC  G I  A      M   G  P+ ++Y  +L  LC   +  +A    
Sbjct: 391 DVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELM 450

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + + G  P+ +++ T+I  LC  G + +A E L  ML     P+   ++ +IDG G+ 
Sbjct: 451 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 510

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G+   A  + ++M+  G+S N   ++++  A +  G I     + + +    +  D   Y
Sbjct: 511 GNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLY 570

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N +I + C  G    A++    M+  G  P+  TYT LI+G  + G +KEA+E+  ++ +
Sbjct: 571 NAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCS 630

Query: 535 LGLAIDHI 542
            G    H+
Sbjct: 631 KGALRKHL 638



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 187/413 (45%), Gaps = 2/413 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+  T+  LV  LC  G +  A  V+ +M+    +P    Y+  +   CR +    A+ +
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              +   G   +    N+++ A+C +G + +AV+ L ++L         DV++   ++  
Sbjct: 169 LRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFG--CEPDVVSYNAVLRG 226

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                       L  +M       +IV ++ LI   C NG          QM + G  PD
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V  Y T+++ +CK+ +L+ A      +   G++P+ + Y T+++GLC      +A   L 
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M +K    +   +N+++D   + G +     + + ML  G   +V T+  +I    + G
Sbjct: 347 EMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEG 406

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            I +A  L + M   G  P+  +Y +++   C+      A +L  +M+++G  P+ +T+ 
Sbjct: 407 LIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFN 466

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            LI   C +G +++A E+  ++   G + D I +  +     +   +D+A ++
Sbjct: 467 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALEL 519



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 164/360 (45%), Gaps = 7/360 (1%)

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YNA + GYCR  +L  A  L +++    + PN  T+  LV ALC +G + DA+  L ++ 
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVP---VAPNAYTYFPLVRALCARGRIADALAVLDDM- 137

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
               G A +  +    L  +   +G +  A+ +  D+  +    D+   N+++   C  G
Sbjct: 138 -ARRGCAPTPPMYHVTLEAACRASGFR-GAVGVLRDLHGRGCALDVGNCNLVLQAVCDQG 195

Query: 311 DISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
            +  A      +L   G  PDV++YN +L  LC   +          +   G  P+ +++
Sbjct: 196 PVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTF 255

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            T+I  LC +G   +  E    M E    P+  ++  IIDG  +   L  A  I + M S
Sbjct: 256 STLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPS 315

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
           +G+S NV  +N L+          +A  L  EM       D  T+N+L+   C  G +  
Sbjct: 316 YGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDR 375

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
            +++ ++ML  G  PD+ITYT +I G C  G + EA  +   +   G   + + + I+ K
Sbjct: 376 VIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLK 435



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/199 (19%), Positives = 86/199 (43%), Gaps = 4/199 (2%)

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  ++ G C  G +  AR    S+    V P  + +  ++      G +++A ++ D M 
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASV---PVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G +     ++  + A  R      A  + +++   G   DV   NL++ A C+ G + 
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 489 LALQLYDEMLRR-GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            A++L  ++L   G  PD+++Y  +++G C        +++  ++   G   + + F  L
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 548 KKRYRRMKESDKARDIHQK 566
                R    ++  ++H +
Sbjct: 259 IGHLCRNGLFERVHEVHAQ 277


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 203/449 (45%), Gaps = 33/449 (7%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   + A+IR+L   GKI  A  + + M   G VPDV+T + +++ L K G +  A 
Sbjct: 87  LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAV 146

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + + M     +PN   Y+A I G C+  ++D AL + + M      P+ +T+N+L+  L
Sbjct: 147 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGL 206

Query: 234 CKKGLLGDAVKFLGEVL---------------------ADDDGKA------------TSD 260
           CK G +  A  F  E+L                      + D  +            T D
Sbjct: 207 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTID 266

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           + T T ++D   KN    +A+AL   +        I  YN L+NG C  G +  A     
Sbjct: 267 IHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 326

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +++  G  PDV+TY +L++ L K+ +  EA   +  ++  G+A D + Y  +I+ L   G
Sbjct: 327 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTG 386

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            I +A     +M     VP+    + +IDG  + G +  A  I   M + G++ N   ++
Sbjct: 387 KIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYS 446

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           ALI    +   +  A  +  +M      PD  TYN+LI   C  G +  A   +DEML  
Sbjct: 447 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA 506

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVF 529
           G  PD+ TY  LI G C  GN   A  VF
Sbjct: 507 GCKPDVYTYNILISGFCKAGNTDAACGVF 535



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 196/452 (43%), Gaps = 74/452 (16%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  LC   K+  AL +  +M +    PD +T+N L++ LCK GD+E A     EM 
Sbjct: 164 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEML 223

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALH------------------------------- 209
           E    P+  TYN  I+G+C+    D A H                               
Sbjct: 224 EAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKI 283

Query: 210 -----LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
                L   +  NG  P   T+N L++ LCK G L +A+  L +++   D   T DV+T 
Sbjct: 284 EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV---DNGCTPDVVTY 340

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T L+D   K    F+A  L+ +M  + +  D V Y  LI      G I  A + +  M  
Sbjct: 341 TSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTS 400

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G +PDV+T +T+++ L K G++  A   +  +   G+AP+++ Y  +I GLC    +  
Sbjct: 401 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 460

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A E L  M +    P+   +N++IDG  + GD+  A +  D ML  G   +V+T      
Sbjct: 461 ALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT------ 514

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
                                        YN+LI   C  G+   A  ++D+M     + 
Sbjct: 515 -----------------------------YNILISGFCKAGNTDAACGVFDDMSSSRCSA 545

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +++TY  LI G C R  + +A   F  ++  G
Sbjct: 546 NVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 201/398 (50%), Gaps = 4/398 (1%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           +E+A  ++ +++    +P  ATYNA + G C++  L++A+ L   + +NG  P+ VT+  
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L+  L K+    +A K   E+     G A  D +  T L+    + G   QA +++  M 
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALR--GLAL-DTVCYTALIRELLQTGKIPQASSVYKTMT 118

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
                 D+V  + +I+G    G I +A   F  M  RG  P+ + Y+ L++ LCK  K+D
Sbjct: 119 SHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 178

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            A      + K    PD I+Y  +I GLC  GD+  AR F   MLE    P+ + +N++I
Sbjct: 179 CALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 238

Query: 409 DGYGRCGDLSNA-FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
            G+ + G+   A  S+       G + ++ T+ A++    +   I +A +L +++  +G 
Sbjct: 239 SGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGC 298

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            P + TYN L+   C +G +  A+ L  +++  G TPD++TYT LI G        EA +
Sbjct: 299 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 358

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           +F ++   GLA+D + +  L +   +  +  +A  +++
Sbjct: 359 LFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYK 396



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 206/426 (48%), Gaps = 4/426 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  LC  G++  A+ L RK++  G  PDV+T+  L++ L K     +A  + +EM+  
Sbjct: 26  ALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR 85

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             + +   Y A I    +  ++ +A  ++ TM ++G  P+ VT + ++  L K G +G A
Sbjct: 86  GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAA 145

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V+    + A   G A ++V+ S  L+    K      AL +   M +     D + YNVL
Sbjct: 146 VRIFKSMEAR--GLAPNEVVYSA-LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVL 202

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK-TG 361
           I+G C +GD+ +A A+F +ML+ G  PDV TYN L++  CK G  D ASH     +   G
Sbjct: 203 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTING 262

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
              D  +Y  I+  L  +  I +A   +  +      P    +N +++G  + G L  A 
Sbjct: 263 CTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 322

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   ++  G + +V T+ +LI    +    F+A+ L KEM L G+  D   Y  LI   
Sbjct: 323 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIREL 382

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
              G I  A  +Y  M   G  PD++T + +I G    G +  A  +F  ++  GLA + 
Sbjct: 383 LQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNE 442

Query: 542 IPFRIL 547
           + +  L
Sbjct: 443 VVYSAL 448


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 219/469 (46%), Gaps = 65/469 (13%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  GK   A  L  +M + G  PDV+T N  ++ LC  G + +A  + R+M   
Sbjct: 131 TLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQID 190

Query: 183 R----PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
                P PN  TYN  + G+C+   L++A  LF  M  +    NR ++NI +  L + G 
Sbjct: 191 EVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGK 250

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L +A   L E++   D     +V +  I+MD   KNG  F A  L   M    +  D V 
Sbjct: 251 LLEAQLVLKEMV---DMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVT 307

Query: 299 YNVLINGFCLNGDISSAFA--------------YFCQML--------------------- 323
           Y  L++G+C  G +S A                Y C +L                     
Sbjct: 308 YTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMN 367

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEA--------SHFYGVLSKTGVA------------ 363
           ++G++ D +T N +++ LC  GKLD+A        +H    L   G +            
Sbjct: 368 EKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRK 427

Query: 364 ---PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
              PD ISY TII GLC  G + +A++  + M+ K++ P+  I++V I  + + G +S+A
Sbjct: 428 KCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSA 487

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           F +   M   G +  + T+N+LI+       IF+ + L  EM   G+ PDV  YN ++ +
Sbjct: 488 FRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSS 547

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            C  G +  A  + DEML++GI+P+I +++ LIK  C   +    +E+F
Sbjct: 548 LCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIF 596



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 207/451 (45%), Gaps = 30/451 (6%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R     G++    WL + M+  G  P+  T N L+  LC  G L+ A  +  +M E  
Sbjct: 27  LLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKG 86

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  ++   + GYCR     K L L   M   G  PN+V +N L+ + CK+G   DA 
Sbjct: 87  CEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAE 146

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI----QTDIVAY 299
           K + E+  D     + DV+T    + +   +G   +A  ++ DM    +    Q +I+ Y
Sbjct: 147 KLVDEMRKDG---LSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITY 203

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N+++ GFC  G +  A A F +M     L +  +YN  L  L + GKL EA      +  
Sbjct: 204 NLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVD 263

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ P+  SY  ++ GLC +G +  AR  +  M    V+P+   +  ++ GY   G +S 
Sbjct: 264 MGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSE 323

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A ++   M+  G S N +T N L+ +  + G I +A  L ++M   G   D  T N++I 
Sbjct: 324 ANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVID 383

Query: 480 ASCNLGHIHLALQLYDEML-----------------------RRGITPDIITYTELIKGH 516
             CN G +  A+++ + M                        R+   PD+I+Y+ +I G 
Sbjct: 384 GLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGL 443

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           C  G + EA++ F ++    L  D   + + 
Sbjct: 444 CKAGRVGEAKKKFIEMMGKNLQPDSAIYDVF 474



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 165/401 (41%), Gaps = 42/401 (10%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P +  +N L+    K G ++    + ++M     SP   T+N  I   C    LD A  L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M   G  PN  +  ILV   C+ G                                 
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTS------------------------------ 108

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                   + L L  +M +     + V YN LI+ FC  G    A     +M K G  PD
Sbjct: 109 --------KGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPD 160

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGV----APDQISYKTIIQGLCIHGDIVKAR 386
           V+T+N  ++ LC  GK+ EAS  +  +    V     P+ I+Y  ++ G C  G + +AR
Sbjct: 161 VVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEAR 220

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
                M     +     +N+ + G  R G L  A  +   M+  G+  NV+++N ++   
Sbjct: 221 ALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGL 280

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G +FDA  L + M   G+ PD  TY  L+   C+ G +  A  +  EM+R G +P+ 
Sbjct: 281 CKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNN 340

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            T   L+      G + EAEE+  K+   G  ID +   I+
Sbjct: 341 YTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIV 381



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 209/461 (45%), Gaps = 36/461 (7%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           LK M D G     +E +   +  V+  LC  G +  A  L R M   G +PD +T+  L+
Sbjct: 258 LKEMVDMG-----MEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLL 312

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           +  C  G + +A++V+REM     SPN  T N  +    +   + +A  L   M   G  
Sbjct: 313 HGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYV 372

Query: 221 PNRVTHNILVHALCKKGLLGDAVKF-----------LGEV------LADDDG---KATSD 260
            + VT NI++  LC  G L  A++            LG +      L DD     K   D
Sbjct: 373 IDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPD 432

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           +I+ + ++    K G   +A   + +M  KN+Q D   Y+V I+ FC  G ISSAF    
Sbjct: 433 LISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLK 492

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            M K+G    + TYN+L+  L  + ++ E       + + GV+PD   Y  ++  LC  G
Sbjct: 493 DMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGG 552

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF-GVSSNVF-- 437
            +  A   L  ML+K + P    ++++I  + +  D S    I ++ L+  G    ++  
Sbjct: 553 RVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSL 612

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV--FTYNLLIGASCNLGHIHLALQLYD 495
           TFN L++    GG +  A  L  E  LD  F DV  F Y  LI   C    +  A  +  
Sbjct: 613 TFNELLV----GGEVVKAKEL-FETALDRSF-DVGNFLYKDLIDHLCKDEKLDDASGILH 666

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +++ +G   D  ++  +I G   RGN  EA+E+  K+  + 
Sbjct: 667 KLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEMA 707



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 175/388 (45%), Gaps = 48/388 (12%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+   YN  +    +   +D    L   M  +G+ P   T N+L+  LC  G L DA + 
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARE- 77

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
                                                L++ M +K  + +  ++ +L+ G
Sbjct: 78  -------------------------------------LFDKMPEKGCEPNEYSFGILVRG 100

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           +C  G  S       +M + GF P+ + YNTL++  CK+GK D+A      + K G++PD
Sbjct: 101 YCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPD 160

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV--PEPHI--WNVIIDGYGRCGDLSNAF 421
            +++   I  LC  G +++A      M    V+  P+P+I  +N+++ G+ + G L  A 
Sbjct: 161 VVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEA- 219

Query: 422 SIRDLMLSFGVSSNVF---TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
             R L     VS N+    ++N  +L   R G + +A  + KEM+  G+ P+V++YN+++
Sbjct: 220 --RALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVM 277

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G +  A  L   M   G+ PD +TYT L+ G+C  G + EA  V  ++   G +
Sbjct: 278 DGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCS 337

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQK 566
            ++    IL     +     +A ++ QK
Sbjct: 338 PNNYTCNILLYSLWKEGRISEAEELLQK 365


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 214/457 (46%), Gaps = 38/457 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ L    +IG A ++ ++M +KG  P+V+ +N L++   + G L KA  +   M    
Sbjct: 349 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            S   +TYN  I GYC+  + D A  L   M + G   N+ +   ++  LC   +   A+
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 468

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +F+GE+L  +       + T   L+    K+G   +AL LW     K    D    N L+
Sbjct: 469 RFVGEMLLRNMSPGGGLLTT---LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 525

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF---------- 353
           +G C  G +  AF    ++L RG + D ++YNTL++  C + KLDEA  F          
Sbjct: 526 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 585

Query: 354 -----YGVL--------------------SKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
                Y +L                     + G+ PD  +Y  +I G C      + +EF
Sbjct: 586 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 645

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              M+ K+V P   ++N +I  Y R G LS A  +R+ M   G+S N  T+ +LI   + 
Sbjct: 646 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 705

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
              + +A  L +EM ++G+ P+VF Y  LI     LG +     L  EM  + + P+ IT
Sbjct: 706 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 765

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           YT +I G+   GN+ EA  +  +++  G+  D I ++
Sbjct: 766 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 802



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 223/460 (48%), Gaps = 19/460 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            VI  L + G+   A   + KM+++G  P ++T++ LV  L +   +  A  V++EM++ 
Sbjct: 313 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 372

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   YN  I  +     L+KA+ +   M + G+     T+N L+   CK G   +A
Sbjct: 373 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 432

Query: 243 VKFLGEVLA----DDDGKATSDV--ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
            + L E+L+     + G  TS +  + S ++ DS         AL    +M  +N+    
Sbjct: 433 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS---------ALRFVGEMLLRNMSPGG 483

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
                LI+G C +G  S A   + Q L +GF+ D  T N LL+ LC+ GKLDEA      
Sbjct: 484 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 543

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G   D++SY T+I G C    + +A  FL  M+++ + P+ + ++++I G      
Sbjct: 544 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 603

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A    D     G+  +V+T++ +I    +     +      EM+   + P+   YN 
Sbjct: 604 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 663

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI A C  G + +AL+L ++M  +GI+P+  TYT LIKG      ++EA+ +F +++  G
Sbjct: 664 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 723

Query: 537 LAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRNK 572
           L  +   +  L   Y ++ +  K     R++H K +  NK
Sbjct: 724 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 763



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 195/422 (46%), Gaps = 3/422 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           ++ KG  PDV      +N  CK G +E+A  +  +M E   +PN  T+N  I G      
Sbjct: 264 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 323

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            D+A      M   G+ P  +T++ILV  L +   +GDA   L E+          +VI 
Sbjct: 324 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG---FPPNVIV 380

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              L+DS+ + G   +A+ + + M  K +      YN LI G+C NG   +A     +ML
Sbjct: 381 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 440

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             GF  +  ++ +++  LC     D A  F G +    ++P      T+I GLC HG   
Sbjct: 441 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 500

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           KA E     L K  V +    N ++ G    G L  AF I+  +L  G   +  ++N LI
Sbjct: 501 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 560

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                   + +AF    EM+  G+ PD +TY++LI    N+  +  A+Q +D+  R G+ 
Sbjct: 561 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 620

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PD+ TY+ +I G C     +E +E F ++ +  +  + + +  L + Y R      A ++
Sbjct: 621 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 680

Query: 564 HQ 565
            +
Sbjct: 681 RE 682



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 149/334 (44%), Gaps = 39/334 (11%)

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           AL +F  +AN G+ P++ T NIL+ +L +                               
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVR------------------------------- 251

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
                    ++FQ      D+  K +  D+  +   IN FC  G +  A   F +M + G
Sbjct: 252 --------ANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 303

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+V+T+NT+++ L   G+ DEA  F   + + G+ P  I+Y  +++GL     I  A 
Sbjct: 304 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 363

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             L  M +K   P   ++N +ID +   G L+ A  I+DLM+S G+S    T+N LI   
Sbjct: 364 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 423

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G   +A  L KEML  G   +  ++  +I   C+      AL+   EML R ++P  
Sbjct: 424 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 483

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
              T LI G C  G   +A E++ +    G  +D
Sbjct: 484 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 517



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 148/310 (47%), Gaps = 3/310 (0%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
            D R   A++  LC  GK+  A  ++++++ +G V D +++N L++  C    L++A   
Sbjct: 516 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 575

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           + EM +    P+  TY+  I G   +N++++A+  +     NG+ P+  T+++++   CK
Sbjct: 576 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 635

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
                +  +F  E+++ +      + +    L+ +Y ++G    AL L  DM  K I  +
Sbjct: 636 AERTEEGQEFFDEMMSKN---VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 692

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
              Y  LI G  +   +  A   F +M   G  P+V  Y  L++   K G++ +      
Sbjct: 693 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 752

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +    V P++I+Y  +I G    G++ +A   L  M EK +VP+   +   I GY + G
Sbjct: 753 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 812

Query: 416 DLSNAFSIRD 425
            +  AF   D
Sbjct: 813 GVLEAFKGSD 822



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 13/230 (5%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           + G +PDV T++ +++  CK    E+      EM      PN   YN  I  YCR   L 
Sbjct: 616 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 675

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
            AL L   M + GI PN  T+  L+  +     + +A     E+  +       +V   T
Sbjct: 676 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG---LEPNVFHYT 732

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            L+D Y K G   +   L  +M  KN+  + + Y V+I G+  +G+++ A     +M ++
Sbjct: 733 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 792

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           G +PD ITY   +    KQG + EA  F G         D+ +Y  II+G
Sbjct: 793 GIVPDSITYKEFIYGYLKQGGVLEA--FKG--------SDEENYAAIIEG 832


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 220/473 (46%), Gaps = 62/473 (13%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT- 190
           GKI  A+ + R + + G  P+  T+   +  LC+ G+ E+A  V REM E   +PN  T 
Sbjct: 206 GKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTC 265

Query: 191 ----------------------------------YNAFITGYCRVNELDKALHLFSTMAN 216
                                             Y A I G+C   +L +A  +F  M N
Sbjct: 266 STYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVN 325

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD-------------DGKATSDVIT 263
            GI P+   +  L+HA CK G L  AV    +++++              D     D + 
Sbjct: 326 EGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVL 385

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             I++D+  K G   +A+ L N+M  + +  D+V Y  LI G+CL G +  A   F +M 
Sbjct: 386 YNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMK 445

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           +RG  PD++TYN L+    + G   EA      +   G+ P+  ++  II+GLC+ G + 
Sbjct: 446 ERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVK 505

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD--------LMLSFGVSSN 435
           +A  FL ++ +K +      ++ ++DGY +      A+ +           ML+  V  N
Sbjct: 506 EAEAFLNTLEDKCL----ENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPN 561

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNLGHIHLALQLY 494
              +  LI A  R G +  A  L  +ML++ GI PDV TY ++I   C +  +  A  ++
Sbjct: 562 QIMYGKLIGAFCRDGDMKRA-QLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIF 620

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++M  RGI PD+ITYT ++ GH    N+++A  ++ ++   GL  D + +  L
Sbjct: 621 NDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTAL 673



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 115/507 (22%), Positives = 212/507 (41%), Gaps = 91/507 (17%)

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           +L  + LV    ++G  ++A   + +       P+  + N  +       ++D A+ ++ 
Sbjct: 157 ILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYR 216

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL--MDS 270
            +   G+ PN  T+ I + ALC+KG   +AV    E+  ++ G   + V  ST +  + S
Sbjct: 217 HLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREM--EEAGVNPNAVTCSTYIEGLCS 274

Query: 271 YFKNGDKFQAL-----ALWN---------------------------DMFQKNIQTDIVA 298
           + ++   ++AL     A W                            DM  + I  D   
Sbjct: 275 HKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYI 334

Query: 299 YNVLINGFCLNGDISSAFAY----------------FCQMLKRGFLPDVITYNTLLNCLC 342
           Y  LI+ +C  G++  A A                 F +    G   D + YN +++ LC
Sbjct: 335 YGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALC 394

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K GK++EA      +    ++ D + Y T+I G C+ G +V A+     M E+ + P+  
Sbjct: 395 KLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIV 454

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI---------- 452
            +N+++ G+ R G    A  + D + + G+  N  T N +I      G +          
Sbjct: 455 TYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTL 514

Query: 453 ------------------------FDAFS-LKKE----MLLDGIFPDVFTYNLLIGASCN 483
                                   ++ FS L K+    ML   + P+   Y  LIGA C 
Sbjct: 515 EDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCR 574

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A  ++D ++ RGITPD+ITYT +I G+C    ++EA ++F  ++  G+  D I 
Sbjct: 575 DGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVIT 634

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           + ++   + +      A +++ + + R
Sbjct: 635 YTVVLDGHSKTNNLQDAINLYDEMIAR 661



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 56/367 (15%)

Query: 94  LKENL-DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +K NL D+ K  RD+G     +  D   +  V+  LC  GK+  A+ L  +M  +    D
Sbjct: 363 IKTNLVDQFKEFRDSG-----IFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLD 417

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V+ +  L+   C  G L  A ++  EM E    P+  TYN  + G+ R     +AL L  
Sbjct: 418 VVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLD 477

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            +   G++PN  THN ++  LC  G + +A  FL  +    + K   +    + ++D Y 
Sbjct: 478 CIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTL----EDKCLENY---SAMVDGYC 530

Query: 273 KNGDKFQALALWN--------DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           K     +A  L++         M   +++ + + Y  LI  FC +GD+  A   F  +++
Sbjct: 531 KANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVE 590

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           RG  PDVITY  ++N  C+   L EA   +  + + G+ PD I+Y               
Sbjct: 591 RGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITY--------------- 635

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
                                V++DG+ +  +L +A ++ D M++ G+  ++ T+ AL+ 
Sbjct: 636 --------------------TVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLP 675

Query: 445 AETRGGS 451
            +   GS
Sbjct: 676 GKCNFGS 682


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 206/412 (50%), Gaps = 9/412 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  VI   C  G++  A  L  +M ++G   DVL H+ L+  LC+ G +++A    + M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTM-----ANNGIRPNRVTHNILVHALCK 235
           E   SPN  TYN  + G C+ N +D+ L LF  M     A++G  P+ ++++ ++ ALCK
Sbjct: 62  E-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
              +  A ++   + A        +V+T + L+D   K     +A +L   +  +++   
Sbjct: 121 AQRVDKAYEYFKRMRA---VGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPR 177

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
            + YN ++NGF   G  S        M ++GF  ++I +N +L+ L K  + ++A  F+ 
Sbjct: 178 AMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFE 237

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            L K+G  P+ ++Y   + GLC  G + +A   LL M+E  V P+   ++ IIDG+ + G
Sbjct: 238 RLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 297

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            +  A  +   M+      +  TF  L+   +      +AF + ++M+  G  P + TYN
Sbjct: 298 RMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYN 357

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           +L+   C    +  AL++Y +M R+   PD  TY  LI+  C    + EA+E
Sbjct: 358 VLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKE 409



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 211/473 (44%), Gaps = 54/473 (11%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   +  VI  LC   ++  A    ++M   G  P+V+T++ L++ LCK+  +++A  
Sbjct: 105 EPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYS 164

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRV--------------------------------- 201
           ++ ++      P    YNA + G+ R                                  
Sbjct: 165 LLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALW 224

Query: 202 --NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
             +E +KA   F  +  +G +PN VT+N+ VH LCK G + +A + L E++   + K T 
Sbjct: 225 KNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMV---ESKVTP 281

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DVIT + ++D + K G   +A  ++  M         V +  L++GF  +     AF   
Sbjct: 282 DVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVH 341

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M+  GF+P + TYN L++C+C    ++ A   Y  + +    PD  +Y  +IQ LC  
Sbjct: 342 EDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRA 401

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
             + +A+EFL  M   +VVP   I + +++   + G++  A S+ D         NV   
Sbjct: 402 RRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLD---------NVVEI 452

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
                   + G   +A  + ++M+L G+ PD  TY  ++ + C L  +  A+  +++M  
Sbjct: 453 -------CKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMAS 505

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           RG  P ++TYT LI   C+     +A  +F  +   G        R L    R
Sbjct: 506 RGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLR 558



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 179/383 (46%), Gaps = 44/383 (11%)

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y   I G+C+  ++D+A  L   M   G++ + + H+ L+  LC+KG + +A+       
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEAL------- 54

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                                    ++F+++        +    +++ YN ++NG C   
Sbjct: 55  -------------------------EQFKSMG-------EECSPNVITYNTVVNGLCKAN 82

Query: 311 DISSAFAYFCQMLKR-----GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            I      F  M KR     G  PDVI+Y+T+++ LCK  ++D+A  ++  +   G AP+
Sbjct: 83  RIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPN 142

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++Y ++I GLC    + +A   L+ +  + +VP    +N +++G+ R G  S    +  
Sbjct: 143 VVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLL 202

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   G   N+  FNA++ A  +      A    + +L  G  P+V TYN+ +   C  G
Sbjct: 203 HMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAG 262

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  A ++  EM+   +TPD+ITY+ +I G C  G M +A++VF ++         + F 
Sbjct: 263 KVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFM 322

Query: 546 ILKKRYRRMKESDKARDIHQKWL 568
            L   +   K+S +A  +H+  +
Sbjct: 323 TLLHGFSEHKKSREAFRVHEDMV 345



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 142/310 (45%), Gaps = 6/310 (1%)

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T +++ + K G   QA  L ++M ++ ++ D++ ++ LI G C  G I  A   F  M +
Sbjct: 3   TTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE 62

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT-----GVAPDQISYKTIIQGLCIH 379
               P+VITYNT++N LCK  ++DE    +  + K      G  PD ISY T+I  LC  
Sbjct: 63  ECS-PNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKA 121

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
             + KA E+   M      P    ++ +IDG  +   +  A+S+   +    +      +
Sbjct: 122 QRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYY 181

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           NA++    R G   +   L   M   G   ++  +N ++ A         A Q ++ +L+
Sbjct: 182 NAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLK 241

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G  P+++TY   + G C  G + EA  +  ++    +  D I +  +   + +    DK
Sbjct: 242 SGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDK 301

Query: 560 ARDIHQKWLL 569
           A D+  + ++
Sbjct: 302 ADDVFTRMMV 311



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 6/244 (2%)

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y T++N  CK G++D+A      + + GV  D + + T+IQGLC  G I +A E   SM 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM-----LSFGVSSNVFTFNALILAETR 448
           E+   P    +N +++G  +   +     + D M      S G   +V +++ +I A  +
Sbjct: 62  EECS-PNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
              +  A+   K M   G  P+V TY+ LI   C +  +  A  L  ++    + P  + 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           Y  ++ G   +G   E  E+   ++  G  I+ I F  +     +  E +KA    ++ L
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 569 LRNK 572
              K
Sbjct: 241 KSGK 244


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 195/384 (50%), Gaps = 5/384 (1%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N L+   CK GD+E+A  ++ EM E   SP+  T+++ +   C    L +A+  F  
Sbjct: 106 ITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE 165

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
                  P+ V  NILVH LCK   L +A + + E+    +     DV+T   L+D   K
Sbjct: 166 SVECA--PDSVLFNILVHGLCKANQLSEARQMIEEM---SERGIVPDVVTYNSLIDGLCK 220

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           +    +A  L   M ++ ++ ++V YN LI G+C  G    A     +M++ G  PDV+T
Sbjct: 221 SYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVT 280

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           +N+L++  C++ K+D+A     ++ K   AP+ ++Y  +I GLC  G   +A E L  M 
Sbjct: 281 FNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMD 340

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            + ++P+   +N +I  + R   +  AF I++LM+  GV  +  ++  L +A  +     
Sbjct: 341 GRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFD 400

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +AF+L   M   G  P++FT+N L+   C    +  A  L   M R G  P   TY  L+
Sbjct: 401 EAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLV 460

Query: 514 KGHCARGNMKEAEEVFAKIQTLGL 537
            G C  G + +A+EV   + + G+
Sbjct: 461 TGLCKAGRVDDAKEVLVMMVSEGI 484



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 189/391 (48%), Gaps = 7/391 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           +T++  +  +I   C  G +  A  L  +M ++G  PDV+TH+ +V  LC  G+L +A  
Sbjct: 102 DTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQ 161

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
             RE  E   +P+   +N  + G C+ N+L +A  +   M+  GI P+ VT+N L+  LC
Sbjct: 162 YFRESVEC--APDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLC 219

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K   + +A + L  ++     K   +++T   L+  Y K G    A  L   M Q     
Sbjct: 220 KSYRMEEARQLLETMVKR---KVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHP 276

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL-PDVITYNTLLNCLCKQGKLDEASHF 353
           D+V +N LI+GFC    I  A      ++K+G   P+++TYN L++ LC  G+ +EA   
Sbjct: 277 DVVTFNSLISGFCQKSKIDKACEVL-HLMKKGLCAPNLVTYNVLISGLCDAGRANEACEL 335

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+ PD I+Y ++I   C +  I +A +    M+E+ V+P+   +  +     +
Sbjct: 336 LSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLK 395

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
                 AF++ D M   G   N+FTFN+L+        + +A  L   M   G  P   T
Sbjct: 396 SERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAAST 455

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           Y +L+   C  G +  A ++   M+  GI P
Sbjct: 456 YEVLVTGLCKAGRVDDAKEVLVMMVSEGIQP 486



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 184/382 (48%), Gaps = 5/382 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   H ++++ LC  G +  A+   R+ ++    PD +  N LV+ LCK   L +A  +I
Sbjct: 139 DVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLSEARQMI 196

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EMSE    P+  TYN+ I G C+   +++A  L  TM    +RPN VT+N L++  CK 
Sbjct: 197 EEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKT 256

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G  G A + +  ++         DV+T   L+  + +     +A  + + M +     ++
Sbjct: 257 GCTGLAHQLIERMI---QSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNL 313

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YNVLI+G C  G  + A     +M  RG LPD+ITYN+L+   C+  ++++A     +
Sbjct: 314 VTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNL 373

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + + GV PD ISY T+   L       +A   L +M +   +P    +N +++G      
Sbjct: 374 MVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRR 433

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L  A  +  +M   G      T+  L+    + G + DA  +   M+ +GI P V +   
Sbjct: 434 LDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGT 493

Query: 477 LIGASCNLGHIHLALQLYDEML 498
           ++      G   LAL  +D+++
Sbjct: 494 IVHTLAREGKQDLALHYFDQVV 515



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 154/317 (48%), Gaps = 3/317 (0%)

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWND-MFQKNIQTDIVAYNVLINGFCLNGDIS 313
           G++  +  T   L+ +  K     QA  ++ D +  ++  T+ + YN LI GFC  GD+ 
Sbjct: 63  GESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDME 122

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            AF    +M +RG  PDV+T+++++  LC  G L  A  ++        APD + +  ++
Sbjct: 123 RAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFR--ESVECAPDSVLFNILV 180

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            GLC    + +AR+ +  M E+ +VP+   +N +IDG  +   +  A  + + M+   V 
Sbjct: 181 HGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVR 240

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            N+ T+N LI    + G    A  L + M+  G  PDV T+N LI   C    I  A ++
Sbjct: 241 PNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEV 300

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
              M +    P+++TY  LI G C  G   EA E+ +++   G+  D I +  L   + R
Sbjct: 301 LHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCR 360

Query: 554 MKESDKARDIHQKWLLR 570
             + ++A  I    + R
Sbjct: 361 NFQIEQAFQIQNLMVER 377



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 152/299 (50%), Gaps = 2/299 (0%)

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           IT   L+  + K GD  +A  L  +M ++    D+V ++ ++   C  G++S A  YF +
Sbjct: 106 ITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE 165

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
            ++    PD + +N L++ LCK  +L EA      +S+ G+ PD ++Y ++I GLC    
Sbjct: 166 SVECA--PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYR 223

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + +AR+ L +M+++ V P    +N +I GY + G    A  + + M+  G   +V TFN+
Sbjct: 224 MEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNS 283

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI    +   I  A  +   M      P++ TYN+LI   C+ G  + A +L  EM  RG
Sbjct: 284 LISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRG 343

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           I PDIITY  LI   C    +++A ++   +   G+  D I +  L     + +  D+A
Sbjct: 344 ILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEA 402



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A  L   M   G +P++ T N L+  LC    L++A H++  M  +   P  +TY   +T
Sbjct: 402 AFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVT 461

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
           G C+   +D A  +   M + GI+P   +   +VH L ++G    A+ +  +V+A +
Sbjct: 462 GLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAE 518


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 221/486 (45%), Gaps = 39/486 (8%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  ++ DLC   +      L +KM ++   P+ +T+N ++N   K G +  A 
Sbjct: 234 IEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAAT 293

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV--- 230
            + +EMS +   PNC TYNA I G+C     ++AL +   M   G +PN V+++ L+   
Sbjct: 294 RIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGL 353

Query: 231 --HA------------------------------LCKKGLLGDAVKFLGEVLADDDGKAT 258
             HA                              LC+ GLL ++VK L ++L D      
Sbjct: 354 CRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDG---VV 410

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            DV+T ++L++ + + G       +   M++  +  + + Y  LI  +C  GD+  AF  
Sbjct: 411 PDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKV 470

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           +  M + G+  +    N L++ LCK GK+  A +F+  +SK G  P+ I++  II G   
Sbjct: 471 YVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGN 530

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G+ +KA      M++    P    +  ++    R G    A  + D +     + +  T
Sbjct: 531 SGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVT 590

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N +++   + G + DA +L  EM+   + PD +TY ++       G +  AL  Y  +L
Sbjct: 591 YNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLL 650

Query: 499 RRG-ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
            +G ++P+ + YT  + G    G  K A      ++  GL  D I   ++   Y RM + 
Sbjct: 651 GKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKM 710

Query: 558 DKARDI 563
            KA DI
Sbjct: 711 AKAGDI 716



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 201/421 (47%), Gaps = 3/421 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC+ GK+  A +L +KM + G VP V+T+N ++N  CK G  + A  +I +M    
Sbjct: 174 LINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKG 233

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TYN  +   C+ N   K   L   M    I PN +T+N +++   K+G +G A 
Sbjct: 234 IEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAAT 293

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+   +      + +T   L+D +  +G+  QAL +   M     + + V+Y+ L+
Sbjct: 294 RIFQEMSMLN---LLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALL 350

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C +     + +   +M   G +   I Y  +++ LC+ G L+E+      + K GV 
Sbjct: 351 NGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVV 410

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +++  +I G C  G I   +E +  M +  + P   I+  +I  Y + GD+  AF +
Sbjct: 411 PDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKV 470

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G  +N F  N L+ +  + G +  A      M   G  P+  T++ +I    N
Sbjct: 471 YVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGN 530

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G+   A  ++DEM++ G  P   TY  L+K  C  G  KEA+ +  K+  +  A+D + 
Sbjct: 531 SGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVT 590

Query: 544 F 544
           +
Sbjct: 591 Y 591



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 193/421 (45%), Gaps = 3/421 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR     G +G AL   R M  +G  P V T N L+ +L K   +       +EM   R
Sbjct: 104 LIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARR 163

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+ +T+N  I   C   +L KA +L   M  +G  P+ VT+N +++  CKKG    A+
Sbjct: 164 VCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAAL 223

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + + ++ +       +D  T  +L+D   KN    +   L   M ++ I  + + YN +I
Sbjct: 224 ELIDQMGSKG---IEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSII 280

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NGF   G I +A   F +M     LP+ +TYN L++  C  G  ++A     ++  TG  
Sbjct: 281 NGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPK 340

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+++SY  ++ GLC H     ++  L  M    ++     +  +IDG  R G L+ +  +
Sbjct: 341 PNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKL 400

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D ML  GV  +V TF+ LI    R G I +   +  +M   G+ P+   Y  LI   C 
Sbjct: 401 LDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCK 460

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A ++Y  M R G   +      L+   C  G +  AE  F  +  +G   + I 
Sbjct: 461 TGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSIT 520

Query: 544 F 544
           F
Sbjct: 521 F 521



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 224/490 (45%), Gaps = 14/490 (2%)

Query: 79  NEGNPQAVFNALDLILKENLDR--LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGT 136
           NE +  A+ N L    K  L +  L+ MR  G +   +      + A+I  LC  G +  
Sbjct: 342 NEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIA-----YTAMIDGLCRNGLLNE 396

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           ++ L  KM++ G VPDV+T + L+N  C++G ++    +I +M +   +PN   Y   I 
Sbjct: 397 SVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIY 456

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            YC+  ++ +A  ++  M+  G   N    N+LV +LCK G +G A  F   +    +  
Sbjct: 457 NYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGN-- 514

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              + IT   +++ Y  +G+  +A +++++M +         Y  L+   C  G    A 
Sbjct: 515 -VPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAK 573

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               ++       D +TYNT+L    K G L +A   +  + +  V PD  +Y  I  GL
Sbjct: 574 RLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGL 633

Query: 377 CIHGDIVKAREFLLSMLEKSVV-PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
              G +V A  F  ++L K  V PE  ++   +DG  R G    A    + M   G+ ++
Sbjct: 634 IRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCAD 693

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIF--PDVFTYNLLIGASCNLGHIHLALQL 493
           +   N ++   +R G +  A  +   M+  GI   P + TYN+L+       ++     L
Sbjct: 694 LIATNVILNGYSRMGKMAKAGDIF-TMMWSGITISPSLATYNILLHGYAKKKNLSKCSNL 752

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           Y+ M+R GI PD +T   LI G C    +    ++  K+   G+A+D   F +L  +Y  
Sbjct: 753 YNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCE 812

Query: 554 MKESDKARDI 563
             E  KA D+
Sbjct: 813 TDEVGKAFDL 822



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 179/378 (47%), Gaps = 3/378 (0%)

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N + ++  I  Y R   +  AL  F  M   G  P+  T N+L+  L K+  +G    F 
Sbjct: 97  NPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFF 156

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            E+LA    +   DV T  IL++     G   +A  L   M +      +V YN ++N +
Sbjct: 157 KEMLAR---RVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWY 213

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C  G   +A     QM  +G   D  TYN L++ LCK  +  +       + K  ++P++
Sbjct: 214 CKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNE 273

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           I+Y +II G    G I  A      M   +++P    +N +IDG+   G+   A +I ++
Sbjct: 274 ITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEM 333

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M + G   N  +++AL+    R      + S+ + M ++G+      Y  +I   C  G 
Sbjct: 334 MEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGL 393

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           ++ +++L D+ML+ G+ PD++T++ LI G C  G +K  +E+  K+   GLA + I +  
Sbjct: 394 LNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTT 453

Query: 547 LKKRYRRMKESDKARDIH 564
           L   Y +  +  +A  ++
Sbjct: 454 LIYNYCKTGDVVEAFKVY 471



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 186/388 (47%), Gaps = 8/388 (2%)

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
           +V D+L   YL   +  +GD   A    R M     +P+  T N  +    +  ++    
Sbjct: 99  SVFDLLIRVYLREGM--VGD---ALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVW 153

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
             F  M    + P+  T NIL++ LC +G L  A   L ++  ++ G   S V+T   ++
Sbjct: 154 LFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKM--EESGYVPS-VVTYNTVL 210

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           + Y K G    AL L + M  K I+ D   YN+L++  C N   +  +    +M KR   
Sbjct: 211 NWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMIS 270

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+ ITYN+++N   K+GK+  A+  +  +S   + P+ ++Y  +I G C  G+  +A   
Sbjct: 271 PNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTI 330

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  M      P    ++ +++G  R      + SI + M   G+      + A+I    R
Sbjct: 331 LEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCR 390

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G + ++  L  +ML DG+ PDV T+++LI   C +G I    ++  +M + G+ P+ I 
Sbjct: 391 NGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSII 450

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLG 536
           YT LI  +C  G++ EA +V+  +  +G
Sbjct: 451 YTTLIYNYCKTGDVVEAFKVYVAMSRIG 478



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 205/455 (45%), Gaps = 40/455 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I + C  G +  A  +   M + G   +    N LV+ LCK G +  A++    MS
Sbjct: 451 YTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMS 510

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           ++   PN  T++  I GY       KA  +F  M   G  P+  T+  L+ ALC+ G   
Sbjct: 511 KIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFK 570

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A + L ++       A   V  +TIL+++ FK+G    A+AL+++M Q+N+  D   Y 
Sbjct: 571 EAKRLLDKLHYIPS--AVDTVTYNTILVET-FKSGMLTDAVALFDEMVQRNVLPDSYTYA 627

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFL-PDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           ++  G    G + +A  ++  +L +G + P+ + Y T ++ L + G+   A +F   + K
Sbjct: 628 IIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEK 687

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYGR----- 413
            G+  D I+   I+ G    G + KA +    M    ++ P    +N+++ GY +     
Sbjct: 688 NGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLS 747

Query: 414 -CGDLSN----------AFSIRDLMLSF-------------------GVSSNVFTFNALI 443
            C +L N            +   L+L F                   GV+ +  TFN LI
Sbjct: 748 KCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLI 807

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
           +       +  AF L   M L  IFPD+ T++ +I     +  +  +  L  EML RG  
Sbjct: 808 MKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCI 867

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
           PD   Y  L+   C  G++  A ++  +++ LG++
Sbjct: 868 PDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGIS 902



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 108/462 (23%), Positives = 200/462 (43%), Gaps = 40/462 (8%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
             +++ LC  GK   A  L  K+    +  D +T+N ++ E  K G L  A  +  EM + 
Sbjct: 558  GLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQR 617

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGD 241
               P+  TY     G  R  ++  ALH +  +   G + P +V +   V  L + G    
Sbjct: 618  NVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKA 677

Query: 242  AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYN 300
            A+ F  ++   +     +D+I + ++++ Y + G   +A  ++  M+    I   +  YN
Sbjct: 678  ALYFCEDM---EKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYN 734

Query: 301  VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +L++G+    ++S     +  M++ G  PD +T ++L+   CK   LD        +   
Sbjct: 735  ILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLD 794

Query: 361  GVAPDQISYKTIIQGLCIHGDIVKARE--------------------------------- 387
            GVA DQ ++  +I   C   ++ KA +                                 
Sbjct: 795  GVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQES 854

Query: 388  --FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
               L  MLE+  +P+   +  +++   R G +  AF ++D M + G+SS     +AL+  
Sbjct: 855  HLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRG 914

Query: 446  ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
              + G + +A  +   ML   + P + T+  L+   C    +  AL+L D M    +  D
Sbjct: 915  LAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLD 974

Query: 506  IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +I Y  LI G CA G++  A +++ +I+  GL  +   + IL
Sbjct: 975  VIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCIL 1016



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/477 (22%), Positives = 185/477 (38%), Gaps = 108/477 (22%)

Query: 143  KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
            +MI+ G  P   T+  L+  LC+ G  ++A  ++ ++  +  + +  TYN  +    +  
Sbjct: 543  EMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSG 602

Query: 203  ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
             L  A+ LF  M    + P+  T+ I+   L ++G +  A+ F G +L    G  + + +
Sbjct: 603  MLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGK--GAVSPEKV 660

Query: 263  TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ- 321
              T  +D  F+ G    AL    DM +  +  D++A NV++NG+   G ++ A   F   
Sbjct: 661  MYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMM 720

Query: 322  -----------------------------------MLKRGFLPDVITYNTLLNCLCKQGK 346
                                               M++ G  PD +T ++L+   CK   
Sbjct: 721  WSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAM 780

Query: 347  LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF------------------ 388
            LD        +   GVA DQ ++  +I   C   ++ KA +                   
Sbjct: 781  LDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDS 840

Query: 389  -----------------LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
                             L  MLE+  +P+   +  +++   R G +  AF ++D M + G
Sbjct: 841  IISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALG 900

Query: 432  VSS-----------------------------------NVFTFNALILAETRGGSIFDAF 456
            +SS                                    + TF  L+    R  S+ +A 
Sbjct: 901  ISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEAL 960

Query: 457  SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
             LK  M    +  DV  YN+LI   C  G +  AL+LY E+ +RG+ P++ TY  LI
Sbjct: 961  KLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILI 1017



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 165/351 (47%), Gaps = 4/351 (1%)

Query: 131  GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM-SEMRPSPNCA 189
             G+   AL+    M + G   D++  N ++N   ++G + KA  +   M S +  SP+ A
Sbjct: 672  AGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLA 731

Query: 190  TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            TYN  + GY +   L K  +L++ M   GI P+++T + L+   CK  +L   V      
Sbjct: 732  TYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLD--VGLKLLK 789

Query: 250  LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
                DG A  D  T  +L+  Y +  +  +A  L N M   +I  D+  ++ +I+     
Sbjct: 790  KMLLDGVAV-DQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRV 848

Query: 310  GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
              +  +     +ML+RG +PD   Y  L+N +C+ G +  A      +   G++   ++ 
Sbjct: 849  STVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAE 908

Query: 370  KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
              +++GL   G + +A+  L  ML KS++P    +  ++  + R   L  A  ++D M  
Sbjct: 909  SALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDF 968

Query: 430  FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
              V  +V  +N LI      G +  A  L KE+   G++P++ TY +LI A
Sbjct: 969  CDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDA 1019



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 123/269 (45%)

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            +++LI  +   G +  A   F  M  RGF P V T N LL  L K+ K+     F+  +
Sbjct: 100 VFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEM 159

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
               V PD  ++  +I  LC+ G + KA   L  M E   VP    +N +++ Y + G  
Sbjct: 160 LARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRY 219

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             A  + D M S G+ ++  T+N L+    +       + L K+M    I P+  TYN +
Sbjct: 220 KAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSI 279

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I      G I  A +++ EM    + P+ +TY  LI GHC  GN ++A  +   ++  G 
Sbjct: 280 INGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGP 339

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQK 566
             + + +  L     R  + + ++ I ++
Sbjct: 340 KPNEVSYSALLNGLCRHAKFELSKSILER 368



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 64/145 (44%)

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           ML+  V  +V TFN LI      G +  A  L K+M   G  P V TYN ++   C  G 
Sbjct: 159 MLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGR 218

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
              AL+L D+M  +GI  D  TY  L+   C      +   +  K++   ++ + I +  
Sbjct: 219 YKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNS 278

Query: 547 LKKRYRRMKESDKARDIHQKWLLRN 571
           +   + +  +   A  I Q+  + N
Sbjct: 279 IINGFVKEGKIGAATRIFQEMSMLN 303


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/494 (25%), Positives = 226/494 (45%), Gaps = 72/494 (14%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I+  C+ G + +AL L  ++++ G  P+V   + L+    KIG++EKA+ +   M  M
Sbjct: 332 SLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCM 391

Query: 183 RPSP----------------------------------NCATYNAFITGYCRVNELDKAL 208
              P                                  +  TYN  +   C + ++++A 
Sbjct: 392 GLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEAC 451

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           +L+  M   GI P+ V++N ++   CKKG + DA + +  ++   +     + IT TILM
Sbjct: 452 NLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGII---ESGLKPNAITYTILM 508

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           +  FK GD   A  +++ M    I      +N +ING C  G +S A       +K+ F+
Sbjct: 509 EGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFI 568

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC----------I 378
           P  +TYN +++   K+G +D A   Y  + ++ ++P+ I+Y ++I G C          +
Sbjct: 569 PTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKM 628

Query: 379 HGDIVK-------------------------AREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           H D+ +                         A +F   +LE  + P   ++N++I  Y  
Sbjct: 629 HDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRN 688

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             ++  A ++   M++  +  ++  + +LI    + G +  A  L  EML  GI PD+F 
Sbjct: 689 LNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFM 748

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN+LI   CN G +  A ++  EM    ITP ++ Y  LI GH   GN++EA  +  ++ 
Sbjct: 749 YNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEML 808

Query: 534 TLGLAIDHIPFRIL 547
             GL  D   + IL
Sbjct: 809 DKGLVPDDTTYDIL 822



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 213/452 (47%), Gaps = 40/452 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + AVI      G  G AL L+ +M+      +V     L+   C  GD+  A  +  E+ 
Sbjct: 295 YAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVV 354

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E+  +PN A ++  I    ++  ++KA  L++ M   G++P     N L+    K+ LL 
Sbjct: 355 EVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLE 414

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A   L    A ++G A+  V+T  I++    + G   +A  LW+ M  K I   +V+YN
Sbjct: 415 NAYLLLDG--AVENGIAS--VVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYN 470

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I G C  G +  A      +++ G  P+ ITY  L+    K+G  + A + +  +   
Sbjct: 471 HMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAA 530

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P   ++ +II GLC  G + +AR+ L + +++S +P    +N IIDGY         
Sbjct: 531 GIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGY--------- 581

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
                                      + G+I  A S+ +EM    I P+V TY  LI  
Sbjct: 582 --------------------------VKEGAIDSAESVYREMCRSEISPNVITYTSLING 615

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    + LAL+++D+M R+G+  DI  Y  LI G C   +M+ A + F+K+  +GL  +
Sbjct: 616 FCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPN 675

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
            I + I+   YR +   + A ++H K ++ NK
Sbjct: 676 TIVYNIMISAYRNLNNMEAALNLH-KEMINNK 706



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 185/388 (47%), Gaps = 3/388 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  GK+  A  L  KMI KG  P ++++N+++   CK G ++ A  V+  + E    PN
Sbjct: 441 LCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPN 500

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY   + G  +  + + A ++F  M   GI P   T N +++ LCK G + +A   L 
Sbjct: 501 AITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLN 560

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
             +           +T   ++D Y K G    A +++ +M +  I  +++ Y  LINGFC
Sbjct: 561 TFIKQS---FIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFC 617

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            +  +  A      M ++G   D+  Y TL+   CK   ++ A  F+  L + G+ P+ I
Sbjct: 618 KSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTI 677

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            Y  +I       ++  A      M+   +  +  I+  +IDG  + G LS A  +   M
Sbjct: 678 VYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEM 737

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           L  G+  ++F +N LI      G + +A  + KEM  + I P V  YN LI      G++
Sbjct: 738 LCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNL 797

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKG 515
             A +L+DEML +G+ PD  TY  L+ G
Sbjct: 798 QEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 210/446 (47%), Gaps = 5/446 (1%)

Query: 124 VIRDLCL-GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           V+   CL GGK   A     +   +G   D  +++ ++  +C+  DL+ A  ++    E+
Sbjct: 227 VLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEEL 286

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY A I    R+    +AL L   M ++ +  N      L+   C +G +  A
Sbjct: 287 GWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSA 346

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++   EV+   +   T +V   ++L++   K G+  +A  L+  M    +Q  +   N L
Sbjct: 347 LRLFDEVV---EVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFL 403

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + GF     + +A+      ++ G +  V+TYN +L  LC+ GK++EA + +  +   G+
Sbjct: 404 LKGFRKQNLLENAYLLLDGAVENG-IASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGI 462

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  +SY  +I G C  G +  A E +  ++E  + P    + ++++G  + GD  +AF+
Sbjct: 463 TPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFN 522

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M++ G+    +TFN++I    + G + +A       +     P   TYN +I    
Sbjct: 523 MFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYV 582

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G I  A  +Y EM R  I+P++ITYT LI G C    M  A ++   ++  GL +D  
Sbjct: 583 KEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDIT 642

Query: 543 PFRILKKRYRRMKESDKARDIHQKWL 568
            +  L   + +M++ + A     K L
Sbjct: 643 VYATLIAGFCKMQDMENACKFFSKLL 668



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 171/358 (47%), Gaps = 4/358 (1%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            +N  +  Y R N++ +A+  F  M  +G+ P     N+L+ A+ ++ ++ DA +   E+
Sbjct: 154 VFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEM 213

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
               + +   D  T  +LM +  K G   +A   +     + ++ D  +Y+++I   C  
Sbjct: 214 A---ERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRG 270

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
            D+  A        + G++P   TY  ++    + G   EA      +  + V  +    
Sbjct: 271 SDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVA 330

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            ++I+G C+ GD+  A      ++E  V P   I++V+I+   + G++  A  +   M  
Sbjct: 331 TSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKC 390

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+   VF  N L+    +   + +A+ L    + +GI   V TYN+++   C LG ++ 
Sbjct: 391 MGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGI-ASVVTYNIVLLWLCELGKVNE 449

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           A  L+D+M+ +GITP +++Y  +I GHC +G M +A EV   I   GL  + I + IL
Sbjct: 450 ACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTIL 507



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 3/229 (1%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  +  +   + ++I   C   K+  AL +   M +KG   D+  +  L+   CK+ D+E
Sbjct: 599 RSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDME 658

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A     ++ E+  +PN   YN  I+ Y  +N ++ AL+L   M NN I  +   +  L+
Sbjct: 659 NACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLI 718

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             L K+G L  A+    E+L         D+    +L++    +G    A  +  +M   
Sbjct: 719 DGLLKEGKLSFALDLYSEMLCRG---IVPDIFMYNVLINGLCNHGQLENAGKILKEMDGN 775

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           NI   ++ YN LI G    G++  AF    +ML +G +PD  TY+ L+N
Sbjct: 776 NITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 824



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 127/300 (42%), Gaps = 7/300 (2%)

Query: 222 NRVTHNILVHALCKKGLLGD---AVKFLGEVL---ADDDGKATSDVITSTILMDSYFKNG 275
           N  TH    H L  K + GD   A K L E+L   A+  G   SD      L+ SY +  
Sbjct: 108 NPETHGDAKH-LLNKYVFGDSAPAAKVLVELLVECAERYGFKLSDSRVFNYLLISYVRAN 166

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
              +A+  +  M +  +   +   NVL+        +  A   F +M +R    D  T  
Sbjct: 167 KITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQ 226

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            L+    K GK  EA  ++G  +  G+  D  SY  +IQ +C   D+  A + +    E 
Sbjct: 227 VLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEEL 286

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
             VP    +  +I    R G+   A  ++D M+   V  NV    +LI      G +  A
Sbjct: 287 GWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSA 346

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             L  E++  G+ P+V  +++LI     +G++  A +LY  M   G+ P +     L+KG
Sbjct: 347 LRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKG 406



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 12/218 (5%)

Query: 88  NALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           N +DL LK + D    M+  G     LE D   +  +I   C    +  A     K+++ 
Sbjct: 620 NKMDLALKMHDD----MKRKG-----LELDITVYATLIAGFCKMQDMENACKFFSKLLEV 670

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P+ + +N +++    + ++E A ++ +EM   +   +   Y + I G  +  +L  A
Sbjct: 671 GLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFA 730

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           L L+S M   GI P+   +N+L++ LC  G L +A K L E+   D    T  V+    L
Sbjct: 731 LDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEM---DGNNITPTVLLYNTL 787

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           +  +FK G+  +A  L ++M  K +  D   Y++L+NG
Sbjct: 788 IAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 59/130 (45%)

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
           S+   FN L+++  R   I +A    + ML DG+ P V   N+L+ A      +  A +L
Sbjct: 150 SDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRL 209

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           +DEM  R I  D  T   L++     G   EAE  F +    GL +D   + I+ +   R
Sbjct: 210 FDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCR 269

Query: 554 MKESDKARDI 563
             + D A  +
Sbjct: 270 GSDLDLASKL 279


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 204/437 (46%), Gaps = 39/437 (8%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM--SEMRPSPNCA 189
           G+   A  L  +M   G  P+++T   ++  LCK G++E A  V+ EM   E   SP+  
Sbjct: 150 GRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVI 209

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           T+N+ + G C+   +  A ++F      G RPN VT++ L+  L K   + +A++ L ++
Sbjct: 210 TFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKM 269

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +   +    ++ +T + ++D   K G    A+ +   M       D V YN LI+GF   
Sbjct: 270 V---ELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKR 326

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
             +  A     +ML+ GF P V+TY TL + LC+ G+ DEA      ++  G AP+ I+Y
Sbjct: 327 QRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITY 386

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            +I+ GLC  G + +A  +   M    VV  PH                           
Sbjct: 387 SSIVDGLCKAGRVTEALGYFEKMARDEVVA-PH--------------------------- 418

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
                 V  ++ALI    + G I +A+   + M+  G  PDV T+++LI   C+ G I  
Sbjct: 419 ------VIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDT 472

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
            L+L+  M  RG  PD++TY  L+   C    + EA ++F ++++ GL+ D    R +  
Sbjct: 473 GLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIH 532

Query: 550 RYRRMKESDKARDIHQK 566
               +   + A+ I  +
Sbjct: 533 GLLEVNRDEDAKRIQDE 549



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 204/422 (48%), Gaps = 6/422 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   K+  A+ L ++M+ K   PDV+T+  L++ L K   +++A  +  E     
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMA-NNGIRPNRVTHNILVHALCKKGLLGDA 242
             P   TYN  I G C+   ++ AL L+  MA + G RP  VT++ L+  LC+   +   
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K L E+          + +T   L+++    G   +A +L   M       +++ + ++
Sbjct: 121 CKLLEEMAGR---GCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLI 177

Query: 303 INGFCLNGDISSAFAYFCQM--LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           I G C  G+I +AF    +M  ++ G  PDVIT+N++L+ LCK+ ++ +A + +    + 
Sbjct: 178 IKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER 237

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  P+ ++Y T+I GL     + +A + L  M+E         ++ ++DG  + G + +A
Sbjct: 238 GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDA 297

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +   M   G   +  T+N LI    +   + +A  L +EML  G  P V TY  L   
Sbjct: 298 VVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHG 357

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  G    A+++ D M  RG  P+ ITY+ ++ G C  G + EA   F K+    +   
Sbjct: 358 LCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAP 417

Query: 541 HI 542
           H+
Sbjct: 418 HV 419



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 183/388 (47%), Gaps = 4/388 (1%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           +++ LCK   ++KA  + ++M +    P+  TY A I G  +   + +A  LF      G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
             P  VT+N ++  LCK G + +A+    ++      + T  V+T + L+D   ++ +  
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPT--VVTYSTLIDGLCRDHEVD 118

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +   L  +M  +    + V YN L+N     G    AF+   QM   G  P++IT+  ++
Sbjct: 119 KGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLII 178

Query: 339 NCLCKQGKLDEASHFYG--VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
             LCK+G+++ A        + ++G++PD I++ +++ GLC    I+ A       LE+ 
Sbjct: 179 KGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 238

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P    ++ +IDG  +   +  A  +   M+  G  +N  T++ ++    + G + DA 
Sbjct: 239 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 298

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            + ++M   G  PD  TYN LI        +  A+ L  EML  G  P ++TYT L  G 
Sbjct: 299 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 358

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           C  G   EA E+   +   G A + I +
Sbjct: 359 CRSGRFDEAVEILDYMAARGCAPNAITY 386



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 179/366 (48%), Gaps = 18/366 (4%)

Query: 79  NEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
            EG  +A F  +D +          M ++G     L  D     +V+  LC   +I  A 
Sbjct: 183 KEGEIEAAFRVVDEMF---------MIESG-----LSPDVITFNSVLDGLCKEQRILDAH 228

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            + ++ +++G  P+V+T++ L++ L K+  +++A  ++ +M E+    N  TY+  + G 
Sbjct: 229 NVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGL 288

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            +V  ++ A+ +   M + G  P+ VT+N L+    K+  L +AV  L E+L   +    
Sbjct: 289 LKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREML---EAGFH 345

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
             V+T T L     ++G   +A+ + + M  +    + + Y+ +++G C  G ++ A  Y
Sbjct: 346 PSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGY 405

Query: 319 FCQMLKRGFL-PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
           F +M +   + P VI Y+ L++ LCK GK+DEA  F   + + G  PD +++  +I GLC
Sbjct: 406 FEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLC 465

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G I    E    M E+  VP+   +  ++D   R   +  AF +   M S G+S +  
Sbjct: 466 DAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRS 525

Query: 438 TFNALI 443
           T   +I
Sbjct: 526 TRRTMI 531



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 62/113 (54%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  LC  GKI  A     +MI+ G +PDV+T + L+N LC  G ++    + R M+
Sbjct: 422 YSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMA 481

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           E    P+  TY   +   CR + +D+A  LF  M ++G+ P+R T   ++H L
Sbjct: 482 ERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGL 534



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 43/259 (16%)

Query: 100 RLKTMRDTGPVRCTLETDYRRHVAVIRDLCLG----GKIGTALWLRRKMIQKGTVPDVLT 155
           R +     G +R  LE  +   V     LC G    G+   A+ +   M  +G  P+ +T
Sbjct: 326 RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAIT 385

Query: 156 HNYLVNELCKIGDLEKADHVIREMS-EMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           ++ +V+ LCK G + +A     +M+ +   +P+   Y+A I G C+  ++D+A      M
Sbjct: 386 YSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERM 445

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G  P+ VT +IL++ LC  G +             D G                   
Sbjct: 446 IRAGRIPDVVTFSILINGLCDAGRI-------------DTG------------------- 473

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
                 L L+  M ++    D+V Y  L++  C    +  AF  F QM   G  PD  T 
Sbjct: 474 ------LELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTR 527

Query: 335 NTLLNCLCKQGKLDEASHF 353
            T+++ L +  + ++A   
Sbjct: 528 RTMIHGLLEVNRDEDAKRI 546



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 1/179 (0%)

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC    + KA      M++K++ P+   +  +IDG G+   +  A+ + +   + G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNLGHIHLA 490
               V T+N +I    + G I +A +L  +M +  G  P V TY+ LI   C    +   
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
            +L +EM  RG  P+ +TY  L+     +G  KEA  +  ++   G   + I F ++ K
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIK 179


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 211/442 (47%), Gaps = 6/442 (1%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D   ++ LD L  M D    RC L  D   +  VI  L   G++  A  L   M+ +G  
Sbjct: 184 DKTSQQALDLLHIMADH-KGRCPL--DVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPS 240

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PDV+T++ +++ L K   ++KA  V   M +    P+C  Y + + GYC   +  +A+ +
Sbjct: 241 PDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGI 300

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M  +G+ P+ VT+  L+  LCK G   +A K    ++         D  T   L+  
Sbjct: 301 FKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGH---KPDSTTYGTLLHG 357

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           Y   G   +   L + M +K +Q     +N+++  +  +  +  A   F  M ++G  PD
Sbjct: 358 YATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPD 417

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           ++ Y T+L+ LC  G++D+A   +  L   G+AP+ + + T+I GLC      K  E   
Sbjct: 418 IVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAF 477

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M+++ +  +   +N I+    + G +  A ++ DLM+  G+  N  T+N LI      G
Sbjct: 478 EMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDG 537

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A  L   M+ +G+ P   TYN +I      G I   L L  EM  +G+ P I+TY 
Sbjct: 538 KMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYE 597

Query: 511 ELIKGHCARGNMKEAEEVFAKI 532
            L++G    G    A+E++ ++
Sbjct: 598 MLLQGLFQAGRTVAAKELYLRM 619



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 192/416 (46%), Gaps = 12/416 (2%)

Query: 137 ALWLRRKMIQKGT---VPDVLTHNYLVNELCKIGDLEKA----DHVIREMSEMRPSP-NC 188
           A+ L  +M + G     P++ T+  ++    ++G L+ A      VI       P+P   
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQS 139

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
           ++     T   R   +D  L     M   G +P+  ++ IL+  LC       A+  L  
Sbjct: 140 SSQGPLCTAGGRAMRMDIVLR---RMPELGCKPDLFSYTILLKGLCDDKTSQQALDLL-H 195

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           ++AD  G+   DV+  T +++   + G   +A +L++ M  +    D+V Y+ +I+    
Sbjct: 196 IMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSK 255

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
              +  A   F +M+K G +PD I Y +L++  C  GK  EA   +  + + GV PD ++
Sbjct: 256 TQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVT 315

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  ++  LC +G   +AR+   S++++   P+   +  ++ GY   G L     + DLM+
Sbjct: 316 YTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMM 375

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G+      FN ++ A  +   + +A  +   M   G+ PD+  Y  ++   C  G + 
Sbjct: 376 KKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVD 435

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            AL  ++ +   G+ P+I+ +T LI G C      + EE+  ++   G+ +D I F
Sbjct: 436 DALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFF 491



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 181/406 (44%), Gaps = 41/406 (10%)

Query: 163 LCKIGDLE-KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR- 220
           LC  G    + D V+R M E+   P+  +Y   + G C      +AL L   MA++  R 
Sbjct: 145 LCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRC 204

Query: 221 P-NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
           P + V +  +++ L ++G L  A      +L   D   + DV+T + ++ +  K     +
Sbjct: 205 PLDVVAYTTVINGLLREGQLDKAYSLFDAML---DRGPSPDVVTYSSIISALSKTQAMDK 261

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  ++  M +  +  D + Y  L++G+C +G    A   F +M + G  PDV+TY  L++
Sbjct: 262 ATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMD 321

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LCK GK  EA   +  L K G  PD  +Y T++ G    G +V+  + L  M++K +  
Sbjct: 322 YLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQL 381

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS-- 457
             HI+N+I+  Y +   +  A  +   M   G++ ++  +  ++      G + DA S  
Sbjct: 382 GHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQF 441

Query: 458 ---------------------------------LKKEMLLDGIFPDVFTYNLLIGASCNL 484
                                            L  EM+  GI  D   +N ++G  C  
Sbjct: 442 NSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKK 501

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           G +  A  L+D M+R GI P+  TY  LI G+C  G M EA ++  
Sbjct: 502 GRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLG 547



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 147/345 (42%), Gaps = 67/345 (19%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + +++   C  GK   A+ + +KM + G  PDV+T+  L++ LCK G   +A  +   + 
Sbjct: 281 YTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLV 340

Query: 181 EMRPSPNCATYNAFITGYC-----------------------------------RVNELD 205
           +    P+  TY   + GY                                    + N++D
Sbjct: 341 KRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVD 400

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK----FLGEVLADD-------- 253
           +AL +FS M   G+ P+ V +  ++  LC  G + DA+        E LA +        
Sbjct: 401 EALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLI 460

Query: 254 DGKATSD-----------VITSTILMDSYF---------KNGDKFQALALWNDMFQKNIQ 293
            G  T D           +I   I +D+ F         K G   +A  L++ M +  I+
Sbjct: 461 HGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIE 520

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +   YN LI+G+CL+G +  A      M+  G  P  +TYNT++N   + G++++    
Sbjct: 521 PNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTL 580

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
              +   GV P  ++Y+ ++QGL   G  V A+E  L M++   V
Sbjct: 581 LREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWDTV 625



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 122/266 (45%), Gaps = 11/266 (4%)

Query: 315 AFAYFCQMLKRGFL---PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           A + F +M + G     P++ TY  ++ C  + G+LD A    G +  TG+  +    ++
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQS 139

Query: 372 IIQG-LCIHGDIVKAREFLLS-MLEKSVVPEPHIWNVIIDGYGRCGDLSN--AFSIRDLM 427
             QG LC  G      + +L  M E    P+   + +++ G   C D ++  A  +  +M
Sbjct: 140 SSQGPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGL--CDDKTSQQALDLLHIM 197

Query: 428 LSFG--VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
                    +V  +  +I    R G +  A+SL   ML  G  PDV TY+ +I A     
Sbjct: 198 ADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQ 257

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  A Q++  M++ G+ PD I YT L+ G+C+ G  KEA  +F K+   G+  D + + 
Sbjct: 258 AMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYT 317

Query: 546 ILKKRYRRMKESDKARDIHQKWLLRN 571
            L     +  +S +AR I    + R 
Sbjct: 318 ALMDYLCKNGKSTEARKIFDSLVKRG 343


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 203/427 (47%), Gaps = 3/427 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE       A+I  LC+ G +  A+ L   M +     DV T+  L+N LCK GD   A 
Sbjct: 143 LEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAV 202

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             +R+M E    PN   Y+  + G C+   + +AL+L S M+  G+RPN VT+  L+  L
Sbjct: 203 EWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGL 262

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C  G   +    L E++         D+ T  IL+D++ K G   QA ++   M      
Sbjct: 263 CNFGRWKETGSLLDEMIKMG---MRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEG 319

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+  YN LI+ +CL   ++ A   F  M+ RG LPD++ + +L++  CK   +++  H 
Sbjct: 320 PDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHL 379

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              ++K G  PD +++ T+I G C  G  + A+E  L+M +   VP      VI+DG  +
Sbjct: 380 LEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCK 439

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              LS A S+ + M    +  N+  ++ L+      G +  A+ L   +   G+  +V+T
Sbjct: 440 GNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYT 499

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y ++I   C  G +  A  L   M   G  PD  TY   ++G   +  +  + +    ++
Sbjct: 500 YTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMR 559

Query: 534 TLGLAID 540
             G ++D
Sbjct: 560 DKGFSVD 566



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 219/460 (47%), Gaps = 7/460 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D      VI  LC    +     +   M + G  P V+T   L+N LC  G++ +A 
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAV 167

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++  M +MR   +  TY   I G C+  +   A+     M     +PN V ++ ++  L
Sbjct: 168 GLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGL 227

Query: 234 CKKGLLGDAVKFLGEVLADDDGKAT-SDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           CK GL+ +A+    E+     GK    +++T   L+      G   +  +L ++M +  +
Sbjct: 228 CKDGLVSEALNLCSEM----SGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGM 283

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           + D+   N+L++ FC  G +  A +    M+  G  PDV TYN+L++  C Q K++EA  
Sbjct: 284 RLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMR 343

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            + ++   G  PD + + ++I G C   +I K    L  M +   VP+   W  +I G+ 
Sbjct: 344 VFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFC 403

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           + G    A  +   M  +G   N+ T   ++    +G  + +A SL + M    +  ++ 
Sbjct: 404 QAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIV 463

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            Y++L+   C+ G ++ A +L+  +  +G+  ++ TYT +IKG C +G++ +AE++   +
Sbjct: 464 IYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINM 523

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           +  G   D+  + +  +     KE   AR I    ++R+K
Sbjct: 524 EENGCLPDNCTYNVFVQGLLTKKEI--ARSIKYLTIMRDK 561



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 189/381 (49%), Gaps = 13/381 (3%)

Query: 163 LCKIGDLEKADHVI---REMSEMRPSPNCATYNAFITGYCRVNELDKAL----HLFSTMA 215
           LCK G ++  D  +   + M+ M+P P+   +   +    R+     A+    H+FS++ 
Sbjct: 48  LCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSL- 106

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
             GI  + +T NI+++ LC+  L+      LG +           V+T T L++     G
Sbjct: 107 --GIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLG---LEPTVMTLTALINGLCVQG 161

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
           +  QA+ L + M +     D+  Y VLING C  GD  +A  +  +M +R + P+V+ Y+
Sbjct: 162 NVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYS 221

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           T+++ LCK G + EA +    +S  GV P+ ++Y  +IQGLC  G   +    L  M++ 
Sbjct: 222 TIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKM 281

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
            +  +    N+++D + + G +  A S+   M+  G   +VFT+N+LI        + +A
Sbjct: 282 GMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEA 341

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             +   M+  G  PD+  +  LI   C   +I+  + L +EM + G  PD++T+T LI G
Sbjct: 342 MRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGG 401

Query: 516 HCARGNMKEAEEVFAKIQTLG 536
            C  G    A+E+F  +   G
Sbjct: 402 FCQAGRPLAAKELFLNMHKYG 422



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 216/471 (45%), Gaps = 9/471 (1%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK-GTVPD 152
           + E LD  + M    P+      D+   + VI  L       TA+ L + +    G   D
Sbjct: 57  IDEALDLFQGMASMKPLPSV--KDFTLLLGVIVRL---KHYTTAISLVKHIFSSLGIEAD 111

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
            +T N ++N LC++  +     V+  M ++   P   T  A I G C    + +A+ L  
Sbjct: 112 TITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVD 171

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M       +  T+ +L++ LCK G    AV++L ++   ++     +V+  + +MD   
Sbjct: 172 HMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKM---EERNWKPNVVVYSTIMDGLC 228

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K+G   +AL L ++M  K ++ ++V Y  LI G C  G      +   +M+K G   D+ 
Sbjct: 229 KDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQ 288

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           T N L++  CK+GK+ +A    G +  TG  PD  +Y ++I   C+   + +A      M
Sbjct: 289 TLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLM 348

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           + +  +P+  ++  +I G+ +  +++    + + M   G   +V T+  LI    + G  
Sbjct: 349 VSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRP 408

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             A  L   M   G  P++ T  +++   C    +  A+ L + M +  +  +I+ Y+ L
Sbjct: 409 LAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSIL 468

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           + G C+ G +  A E+F+ +   GL I+   + I+ K   +    DKA D+
Sbjct: 469 LDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDL 519



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 162/348 (46%), Gaps = 8/348 (2%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D ++ E L+    M   G VR  L T    +  +I+ LC  G+      L  +MI+ G  
Sbjct: 230 DGLVSEALNLCSEMSGKG-VRPNLVT----YACLIQGLCNFGRWKETGSLLDEMIKMGMR 284

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
            D+ T N LV+  CK G + +A  VI  M      P+  TYN+ I  YC  N++++A+ +
Sbjct: 285 LDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRV 344

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M + G  P+ V    L+H  CK   +   +  L E+          DV+T T L+  
Sbjct: 345 FHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEM---AKMGFVPDVVTWTTLIGG 401

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + + G    A  L+ +M +     ++    V+++G C    +S A +    M K     +
Sbjct: 402 FCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLN 461

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           ++ Y+ LL+ +C  GKL+ A   +  L   G+  +  +Y  +I+GLC  G + KA + L+
Sbjct: 462 IVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLI 521

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
           +M E   +P+   +NV + G     +++ +     +M   G S +  T
Sbjct: 522 NMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAAT 569



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 158/344 (45%), Gaps = 9/344 (2%)

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS----TILMDSYFKNGDKFQALAL 283
           I +  LCK G     VK + E L    G A+   + S    T+L+    +      A++L
Sbjct: 43  ISMRNLCKSG----KVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISL 98

Query: 284 WNDMFQK-NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
              +F    I+ D +  N++IN  C    ++  F+    M K G  P V+T   L+N LC
Sbjct: 99  VKHIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLC 158

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
            QG + +A      + K     D  +Y  +I GLC  GD + A E+L  M E++  P   
Sbjct: 159 VQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVV 218

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
           +++ I+DG  + G +S A ++   M   GV  N+ T+  LI      G   +  SL  EM
Sbjct: 219 VYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEM 278

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           +  G+  D+ T N+L+ A C  G +  A  +   M+  G  PD+ TY  LI  +C +  M
Sbjct: 279 IKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKM 338

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            EA  VF  + + G   D + F  L   + + K  +K   + ++
Sbjct: 339 NEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEE 382



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 128/276 (46%), Gaps = 7/276 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + ++I   CL  K+  A+ +   M+ +G +PD++    L++  CK  ++ K  H++
Sbjct: 321 DVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLL 380

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM++M   P+  T+   I G+C+      A  LF  M   G  PN  T  +++  LCK 
Sbjct: 381 EEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKG 440

Query: 237 GLLGDAVKFLGEVLADDDGKATSD--VITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
            LL +AV      LA+   K+  D  ++  +IL+D     G    A  L++ +  K +Q 
Sbjct: 441 NLLSEAVS-----LAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQI 495

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++  Y ++I G C  G +  A      M + G LPD  TYN  +  L  + ++  +  + 
Sbjct: 496 NVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYL 555

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            ++   G + D  + +  I  L  +    + REF  
Sbjct: 556 TIMRDKGFSVDAATTEITINYLSTNEGDTRIREFFF 591



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 67/152 (44%)

Query: 82  NPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLR 141
           N Q     LD + K NL            +  L+ +   +  ++  +C  GK+  A  L 
Sbjct: 426 NLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELF 485

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
             +  KG   +V T+  ++  LCK G L+KA+ ++  M E    P+  TYN F+ G    
Sbjct: 486 SSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTK 545

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            E+ +++   + M + G   +  T  I ++ L
Sbjct: 546 KEIARSIKYLTIMRDKGFSVDAATTEITINYL 577


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 210/438 (47%), Gaps = 6/438 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           ++ LD L  M D    RC L  D   +  VI  L   G++  A  L   M+ +G  PDV+
Sbjct: 187 QQALDLLHIMADH-KGRCPL--DVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVV 243

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++ +++ L K   ++KA  V   M +    P+C  Y + + GYC   +  +A+ +F  M
Sbjct: 244 TYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKM 303

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
             +G+ P+ VT+  L+  LCK G   +A K    ++         D  T   L+  Y   
Sbjct: 304 CRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGH---KPDSTTYGTLLHGYATE 360

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +   L + M +K +Q     +N+++  +  +  +  A   F  M ++G  PD++ Y
Sbjct: 361 GALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNY 420

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
            T+L+ LC  G++D+A   +  L   G+AP+ + + T+I GLC      K  E    M++
Sbjct: 421 GTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMID 480

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           + +  +   +N I+    + G +  A ++ DLM+  G+  N  T+N LI      G + +
Sbjct: 481 RGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDE 540

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L   M+ +G+ P   TYN +I      G I   L L  EM  +G+ P I+TY  L++
Sbjct: 541 AMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQ 600

Query: 515 GHCARGNMKEAEEVFAKI 532
           G    G    A+E++ ++
Sbjct: 601 GLFQAGRTVAAKELYLRM 618



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 195/414 (47%), Gaps = 9/414 (2%)

Query: 137 ALWLRRKMIQKGT---VPDVLTHNYLVNELCKIGDLEKADHVIREM--SEMRPSPNCATY 191
           A+ L  +M + G     P++ T+  ++    ++G L+ A   +  +  + +R SP    +
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSP--ILF 137

Query: 192 NAFITGYCRVNELDKALHL-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           +  + G C       A+ +    M   G +P+  ++ IL+  LC       A+  L  ++
Sbjct: 138 SPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLL-HIM 196

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
           AD  G+   DV+  T +++   + G   +A +L++ M  +    D+V Y+ +I+      
Sbjct: 197 ADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQ 256

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A   F +M+K G +PD I Y +L++  C  GK  EA   +  + + GV PD ++Y 
Sbjct: 257 AMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYT 316

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            ++  LC +G   +AR+   S++++   P+   +  ++ GY   G L     + DLM+  
Sbjct: 317 ALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKK 376

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+      FN ++ A  +   + +A  +   M   G+ PD+  Y  ++   C  G +  A
Sbjct: 377 GMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDA 436

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           L  ++ +   G+ P+I+ +T LI G C      + EE+  ++   G+ +D I F
Sbjct: 437 LSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFF 490



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 177/395 (44%), Gaps = 40/395 (10%)

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR-P-NRVTHNILV 230
           D V+R M E+   P+  +Y   + G C      +AL L   MA++  R P + V +  ++
Sbjct: 155 DIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVI 214

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           + L ++G L  A      +L   D   + DV+T + ++ +  K     +A  ++  M + 
Sbjct: 215 NGLLREGQLDKAYSLFDAML---DRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKN 271

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            +  D + Y  L++G+C +G    A   F +M + G  PDV+TY  L++ LCK GK  EA
Sbjct: 272 GVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEA 331

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +  L K G  PD  +Y T++ G    G +V+  + L  M++K +    HI+N+I+  
Sbjct: 332 RKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGA 391

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS------------- 457
           Y +   +  A  +   M   G++ ++  +  ++      G + DA S             
Sbjct: 392 YAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPN 451

Query: 458 ----------------------LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
                                 L  EM+  GI  D   +N ++G  C  G +  A  L+D
Sbjct: 452 IVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFD 511

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
            M+R GI P+  TY  LI G+C  G M EA ++  
Sbjct: 512 LMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLG 546



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 147/345 (42%), Gaps = 67/345 (19%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + +++   C  GK   A+ + +KM + G  PDV+T+  L++ LCK G   +A  +   + 
Sbjct: 280 YTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLV 339

Query: 181 EMRPSPNCATYNAFITGYC-----------------------------------RVNELD 205
           +    P+  TY   + GY                                    + N++D
Sbjct: 340 KRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVD 399

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK----FLGEVLADD-------- 253
           +AL +FS M   G+ P+ V +  ++  LC  G + DA+        E LA +        
Sbjct: 400 EALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLI 459

Query: 254 DGKATSD-----------VITSTILMDSYF---------KNGDKFQALALWNDMFQKNIQ 293
            G  T D           +I   I +D+ F         K G   +A  L++ M +  I+
Sbjct: 460 HGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIE 519

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +   YN LI+G+CL+G +  A      M+  G  P  +TYNT++N   + G++++    
Sbjct: 520 PNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTL 579

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
              +   GV P  ++Y+ ++QGL   G  V A+E  L M++   V
Sbjct: 580 LREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWDTV 624



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 123/265 (46%), Gaps = 10/265 (3%)

Query: 315 AFAYFCQMLKRGFL---PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           A + F +M + G     P++ TY  ++ C  + G+LD A    G +  TG+    I +  
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSP 139

Query: 372 IIQGLCIHGDIVKAREFLLS-MLEKSVVPEPHIWNVIIDGYGRCGDLSN--AFSIRDLML 428
           +++GLC       A + +L  M E    P+   + +++ G   C D ++  A  +  +M 
Sbjct: 140 LLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGL--CDDKTSQQALDLLHIMA 197

Query: 429 SFG--VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
                   +V  +  +I    R G +  A+SL   ML  G  PDV TY+ +I A      
Sbjct: 198 DHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQA 257

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A Q++  M++ G+ PD I YT L+ G+C+ G  KEA  +F K+   G+  D + +  
Sbjct: 258 MDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTA 317

Query: 547 LKKRYRRMKESDKARDIHQKWLLRN 571
           L     +  +S +AR I    + R 
Sbjct: 318 LMDYLCKNGKSTEARKIFDSLVKRG 342


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 224/453 (49%), Gaps = 40/453 (8%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M ++G  PDV +++ ++N+L K G L+ A  +  EMSE R +P+   YN  I G+ +  +
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKD 234

Query: 204 LDKALHLFST-MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
              A+ L+   + ++ + PN  THNI++  L K G + D +K    +  ++  K   D+ 
Sbjct: 235 HKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREK---DLY 291

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T + L+      G+  +A +++N++ ++    D+V YN ++ GFC  G I  +   +  M
Sbjct: 292 TYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIM 351

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            +R  + ++++YN L+  L + GK+DEA+  + ++   G A D  +Y   I GLC++G +
Sbjct: 352 EQRNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYV 410

Query: 383 VK-----------------------------------AREFLLSMLEKSVVPEPHIWNVI 407
            K                                   A   +  M +  V    H+ N +
Sbjct: 411 NKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNAL 470

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I G  R   LS+A  +   M   G    V ++N LI      G   +A +  KEML +G+
Sbjct: 471 IGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGL 530

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PD+ TY++L+G  C    I LAL+L+ + L+ G+ PD++ +  LI G C+ G + +A  
Sbjct: 531 KPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMT 590

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           V A ++      + + +  L + Y ++++S++A
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGYFKVRDSNRA 623



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 214/472 (45%), Gaps = 40/472 (8%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            + D   +  VI DL   GK+  AL L  +M ++   PDV  +N L++   K  D + A 
Sbjct: 180 FKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAM 239

Query: 174 HVIREMSE-MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
            +  ++ E     PN  T+N  I+G  +   +D  L ++  M  N    +  T++ L+H 
Sbjct: 240 QLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHG 299

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LC +G +  A     E++   + KA  DV+T   ++  + + G   ++L LW  M Q+N 
Sbjct: 300 LCDEGNVDKAESVFNELV---ERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN- 355

Query: 293 QTDIVAYNVLI-----------------------------------NGFCLNGDISSAFA 317
             +IV+YN+LI                                   +G C+NG ++ A  
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALG 415

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
              ++  +G   DV  Y ++++CLCK+ +L+EAS+    +SK GV  +      +I GL 
Sbjct: 416 VMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
               +  A   +  M +   +P    +N++I G    G    A +    ML  G+  ++ 
Sbjct: 476 RDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLK 535

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T++ L+    R   I  A  L  + L  G+ PDV  +N+LI   C++G +  A+ +   M
Sbjct: 536 TYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANM 595

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
             R  T +++TY  L++G+    +   A  ++  +  +GL  D I +  + K
Sbjct: 596 EHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILK 647



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 187/401 (46%), Gaps = 4/401 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   + ++I  LC  G +  A  +  +++++    DV+T+N ++   C+ G ++++  
Sbjct: 287 EKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLE 346

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           + R M E R S N  +YN  I G     ++D+A  ++  M   G   +  T+ I +H LC
Sbjct: 347 LWRIM-EQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLC 405

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G +  A+  + EV   +      DV     ++D   K     +A  L  +M +  ++ 
Sbjct: 406 VNGYVNKALGVMQEV---ESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVEL 462

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           +    N LI G   +  +S A      M K G LP V++YN L+  LC+ GK  EAS F 
Sbjct: 463 NSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFV 522

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + + G+ PD  +Y  ++ GLC    I  A E     L+  + P+  + N++I G    
Sbjct: 523 KEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSV 582

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G L +A ++   M     ++N+ T+N L+    +      A  +   M   G+ PD+ +Y
Sbjct: 583 GKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISY 642

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           N ++   C    +  A++ +D+    GI P + T+  L++ 
Sbjct: 643 NTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRA 683



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 194/435 (44%), Gaps = 38/435 (8%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P++ T+N L+   CK  + EKA   +  M +    P+  +Y+  I    +  +LD A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDA 203

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           L LF  M+   + P+   +NIL+    K+     A++   ++L  +D     +V T  I+
Sbjct: 204 LELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLL--EDSSVYPNVKTHNIM 261

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +    K G     L +W+ M Q   + D+  Y+ LI+G C  G++  A + F ++++R  
Sbjct: 262 ISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKA 321

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ------------- 374
             DV+TYNT+L   C+ GK+ E+   + ++ +   + + +SY  +I+             
Sbjct: 322 FIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATM 380

Query: 375 ----------------------GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
                                 GLC++G + KA   +  +  K    + + +  IID   
Sbjct: 381 IWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLC 440

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +   L  A ++   M   GV  N    NALI    R   + DA  L + M  +G  P V 
Sbjct: 441 KKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVV 500

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           +YN+LI   C  G    A     EML  G+ PD+ TY+ L+ G C    ++ A E++ + 
Sbjct: 501 SYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQF 560

Query: 533 QTLGLAIDHIPFRIL 547
              GL  D +   IL
Sbjct: 561 LQSGLEPDVMMHNIL 575



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 173/376 (46%), Gaps = 25/376 (6%)

Query: 174 HVIREMSEMRPSPNCATYNAFI-TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
           H++R +SE R   +       I +  C+ +E D AL +  T   N + P+R         
Sbjct: 48  HILRRLSEARMVTHVGRIVELIRSQECKCDE-DVALSVIKTYGKNSM-PDRAL------- 98

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
                   D  K + E+   + G     + +   L++++ +     +  +L+       +
Sbjct: 99  --------DVFKRMREIFGCEPG-----IRSYNTLLNAFVEAKQWVKVESLFAYFETAGV 145

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             ++  YNVLI   C   +   A  +   M K GF PDV +Y+T++N L K GKLD+A  
Sbjct: 146 APNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALE 205

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE-KSVVPEPHIWNVIIDGY 411
            +  +S+  VAPD   Y  +I G     D   A +    +LE  SV P     N++I G 
Sbjct: 206 LFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGL 265

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +CG + +   I D M       +++T+++LI      G++  A S+  E++    F DV
Sbjct: 266 SKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDV 325

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TYN ++G  C  G I  +L+L+  M +R  + +I++Y  LIKG    G + EA  ++  
Sbjct: 326 VTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRL 384

Query: 532 IQTLGLAIDHIPFRIL 547
           +   G A D+  + I 
Sbjct: 385 MPAKGYAADNTTYGIF 400



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 131/287 (45%), Gaps = 38/287 (13%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I  LC+ G +  AL + +++  KG   DV  +  +++ LCK   LE+A ++++EMS+   
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGV 460

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
             N    NA I G  R + L  A  L   M  NG  P  V++NIL+  LC+ G  G+A  
Sbjct: 461 ELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASA 520

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
           F+ E+L   +     D+ T +IL+    ++     AL LW+   Q  ++ D++ +N+LI+
Sbjct: 521 FVKEML---ENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIH 577

Query: 305 GFCLNGDISSAF-----------------------AYF------------CQMLKRGFLP 329
           G C  G +  A                         YF              M K G  P
Sbjct: 578 GLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQP 637

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           D+I+YNT+L  LC   ++  A  F+      G+ P   ++  +++ +
Sbjct: 638 DIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAV 684



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 72/133 (54%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D + +  ++  LC   KI  AL L  + +Q G  PDV+ HN L++ LC +G L+ A 
Sbjct: 530 LKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAM 589

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V+  M     + N  TYN  + GY +V + ++A  ++  M   G++P+ +++N ++  L
Sbjct: 590 TVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGL 649

Query: 234 CKKGLLGDAVKFL 246
           C    +  A++F 
Sbjct: 650 CLCHRVSYAIEFF 662


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 222/449 (49%), Gaps = 7/449 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  L   G +  AL L  +M ++G  PDV  +N L++   K GD+  A  + 
Sbjct: 158 DVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW 217

Query: 177 REMSEMRPS--PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
             + +  PS  PN  +YN  I G C+  + D++  ++  M  N    +  T++ L+H LC
Sbjct: 218 ERLLK-GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 276

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G L  A +   E+    +   + DV+    +++ Y + G   + L LW  M ++  +T
Sbjct: 277 GSGNLDGATRVYKEM---AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT 333

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
            +V+YN+LI G   N  +  A + +  + ++    D +TY  L++ LCK G L++A    
Sbjct: 334 -VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSIL 392

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
                     D  +Y ++I GLC  G + +    L  M +    P P++ N +I+G+ R 
Sbjct: 393 EEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRA 452

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
             L +A      M+S G    V T+N LI   ++     +A++L KEML  G  P++ TY
Sbjct: 453 SKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITY 512

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           +LL+   C    + +AL L+ + L +G  PD+  +  +I G C+ G +++A +++++++ 
Sbjct: 513 SLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQ 572

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDI 563
                + +    L + + ++++ ++A  I
Sbjct: 573 RNCVPNLVTHNTLMEGFYKVRDFERASKI 601



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 206/434 (47%), Gaps = 8/434 (1%)

Query: 124 VIRDLCLGGKIGTA--LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           +I  LC  GK   +  +W R K  ++G   D+ T++ L++ LC  G+L+ A  V +EM+E
Sbjct: 236 MINGLCKCGKFDESFEIWHRMKKNERGQ--DLYTYSTLIHGLCGSGNLDGATRVYKEMAE 293

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
              SP+   YN  + GY R   +++ L L+  M   G R   V++NIL+  L +   + +
Sbjct: 294 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDE 352

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+  + E+L + D    +D +T  +L+    KNG   +AL++  +        D  AY+ 
Sbjct: 353 AIS-IWELLPEKD--CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSS 409

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +ING C  G +        QM K G  P+    N ++N   +  KL++A  F+G +   G
Sbjct: 410 MINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKG 469

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             P  ++Y T+I GL       +A   +  ML+K   P    ++++++G  +   L  A 
Sbjct: 470 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMAL 529

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           ++    L  G   +V   N +I      G + DA  L  EM      P++ T+N L+   
Sbjct: 530 NLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGF 589

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
             +     A +++D +L+ G+ PDII+Y   +KG C+   + +A          G+    
Sbjct: 590 YKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTA 649

Query: 542 IPFRILKKRYRRMK 555
           I + IL + Y  +K
Sbjct: 650 ITWNILVQGYLALK 663



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 184/390 (47%), Gaps = 5/390 (1%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P + ++N L+N L +    ++A+        M  SPN  TYN  I   CR  + DKA
Sbjct: 84  GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 143

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L + M   G  P+  ++  L+++L K G + DA+K   E+    +   T DV    IL
Sbjct: 144 KELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEM---PERGVTPDVACYNIL 200

Query: 268 MDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +D +FK GD   A  +W  + +  ++  +I +YNV+ING C  G    +F  + +M K  
Sbjct: 201 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 260

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
              D+ TY+TL++ LC  G LD A+  Y  +++ GV+PD + Y T++ G    G I +  
Sbjct: 261 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 320

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E L  ++EK        +N++I G      +  A SI +L+      ++  T+  L+   
Sbjct: 321 E-LWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 379

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G +  A S+ +E        D F Y+ +I   C  G +     + D+M + G  P+ 
Sbjct: 380 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP 439

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
                +I G      +++A   F  + + G
Sbjct: 440 YVCNAVINGFVRASKLEDALRFFGNMVSKG 469



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 3/217 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AVI       K+  AL     M+ KG  P V+T+N L+N L K     +A  +++EM + 
Sbjct: 444 AVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQK 503

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY+  + G C+  +LD AL+L+      G +P+   HNI++H LC  G + DA
Sbjct: 504 GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDA 563

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++   E+          +++T   LM+ ++K  D  +A  +W+ + Q  +Q DI++YN+ 
Sbjct: 564 LQLYSEM---KQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNIT 620

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           + G C    IS A  +    + RG LP  IT+N L+ 
Sbjct: 621 LKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQ 657



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 139/277 (50%), Gaps = 10/277 (3%)

Query: 266 ILMDSYFKNGDKFQALALWNDMFQK-----NIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           ++  +Y KN    QAL    D+FQ+       Q  I +YN L+N    +     A ++F 
Sbjct: 58  LVAHAYAKNSMPDQAL----DIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFL 113

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
                G  P++ TYN L+   C++ + D+A      +   G +PD  SY T+I  L  +G
Sbjct: 114 YFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNG 173

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML-SFGVSSNVFTF 439
            +  A +    M E+ V P+   +N++IDG+ + GD+ NA  I + +L    V  N+ ++
Sbjct: 174 YMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSY 233

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N +I    + G   ++F +   M  +    D++TY+ LI   C  G++  A ++Y EM  
Sbjct: 234 NVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAE 293

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            G++PD++ Y  ++ G+   G ++E  E++  ++  G
Sbjct: 294 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG 330



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 3/255 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I  LC  G++     +  +M + G  P+    N ++N   +   LE A      M 
Sbjct: 407 YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMV 466

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P   TYN  I G  +     +A  L   M   G +PN +T+++L++ LC+   L 
Sbjct: 467 SKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLD 526

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A+    + L   +     DV    I++     +G    AL L+++M Q+N   ++V +N
Sbjct: 527 MALNLWCQAL---EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHN 583

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L+ GF    D   A   +  +L+ G  PD+I+YN  L  LC   ++ +A  F       
Sbjct: 584 TLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDR 643

Query: 361 GVAPDQISYKTIIQG 375
           GV P  I++  ++QG
Sbjct: 644 GVLPTAITWNILVQG 658



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 1/127 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            + D + H  +I  LC  GK+  AL L  +M Q+  VP+++THN L+    K+ D E+A 
Sbjct: 540 FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERAS 599

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA- 232
            +   + +    P+  +YN  + G C  + +  A+   +   + G+ P  +T NILV   
Sbjct: 600 KIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGY 659

Query: 233 LCKKGLL 239
           L  KG +
Sbjct: 660 LALKGYM 666



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 4/141 (2%)

Query: 430 FGVSSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           FG    + ++N+L+  L E+      ++F L  E +  G+ P++ TYN+LI  SC     
Sbjct: 83  FGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM--GLSPNLQTYNILIKISCRKKQF 140

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A +L + M  +G +PD+ +Y  LI      G M +A ++F ++   G+  D   + IL
Sbjct: 141 DKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNIL 200

Query: 548 KKRYRRMKESDKARDIHQKWL 568
              + +  +   A +I ++ L
Sbjct: 201 IDGFFKKGDILNASEIWERLL 221


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 224/452 (49%), Gaps = 22/452 (4%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L  ++      P ++T N ++N  C +G+++ A  V+ ++ +M   P+  T    I 
Sbjct: 67  AISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIK 126

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C   ++ +ALH    +   G R N V++ IL++ LCK G    A++ L ++    DGK
Sbjct: 127 GLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKI----DGK 182

Query: 257 -ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
              ++V+  + ++DS  K     +A  L++ M  K +  D+V ++ LI GFC+ G    A
Sbjct: 183 LVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEA 242

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQG-----------------KLDEASHFYGVLS 358
           F  F +M+     PDV T+N L++ LCK+G                 ++++A H + ++ 
Sbjct: 243 FGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIG 302

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           K  V PD  SY  II+ LC    + +A      M  K + P+   ++ +IDG  +   +S
Sbjct: 303 KRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERIS 362

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           +A+ + D M + G  ++V T+ + + A  +   +  A +L K++   GI P++ TYN+LI
Sbjct: 363 HAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILI 422

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G    A  ++ ++L +G    + TY  +I G C  G   EA  +  K++  G  
Sbjct: 423 DGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCT 482

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            D + +  + +   +  E+ KA  + ++ + R
Sbjct: 483 PDVVTYETIIRALFKNDENHKAEKLLREMIAR 514



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 188/400 (47%), Gaps = 20/400 (5%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I+ LCL GK+  AL     +I +G   + +++  L+N LCK+G+   A  V+R++   
Sbjct: 123 TLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGK 182

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             + N   Y+  I   C+   + +A  L+S M    + P+ VT + L++  C  G   +A
Sbjct: 183 LVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEA 242

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ-----------------ALALWN 285
                E++  +      DV T  IL+D+  K G   +                 A  ++N
Sbjct: 243 FGLFHEMVLTN---INPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFN 299

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            + ++ +  D+ +Y ++I   C    +  A + F +M  +G  PD +TY++L++ LCK  
Sbjct: 300 IIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSE 359

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           ++  A      +   G   D I+Y + +  LC +  + KA   +  + ++ + P  + +N
Sbjct: 360 RISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYN 419

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
           ++IDG  + G   NA  I   +L  G    V+T+N +I      G   +A +L ++M  +
Sbjct: 420 ILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDN 479

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
           G  PDV TY  +I A       H A +L  EM+ RG+  +
Sbjct: 480 GCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEE 519



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 152/339 (44%), Gaps = 55/339 (16%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL------------------- 154
           + T+   +  +I  LC    +  A  L  +MI K   PDV+                   
Sbjct: 184 VNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAF 243

Query: 155 ----------------THNYLVNELCKIG-----------------DLEKADHVIREMSE 181
                           T N LV+ LCK G                  + KA HV   + +
Sbjct: 244 GLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGK 303

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
            R +P+  +Y   I   C++  +D+AL LF+ M   GI P++VT++ L+  LCK   +  
Sbjct: 304 RRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISH 363

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A + L ++ A       +DVIT T  + +  KN    +A+AL   +  + IQ +I  YN+
Sbjct: 364 AWELLDQMHARGQ---PADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNI 420

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LI+G C  G   +A   F  +L +G+   V TYN ++N LC +G  DEA      +   G
Sbjct: 421 LIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNG 480

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
             PD ++Y+TII+ L  + +  KA + L  M+ + ++ E
Sbjct: 481 CTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEE 519



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 128/257 (49%), Gaps = 2/257 (0%)

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCL--NGDISSAFAYFCQMLKRGFLPDVIT 333
           D   A++ +  M + N    I+ +N ++       N +   A + + ++      P ++T
Sbjct: 26  DVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVT 85

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           +NT++NC C  G++D A      + K G  PD I+  T+I+GLC++G + +A  F   ++
Sbjct: 86  FNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVI 145

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            +        + ++I+G  + G+   A  +   +    V++NV  ++ +I +  +   + 
Sbjct: 146 ARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVT 205

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A+ L  +M++  + PDV T++ LI   C +G    A  L+ EM+   I PD+ T+  L+
Sbjct: 206 EAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILV 265

Query: 514 KGHCARGNMKEAEEVFA 530
              C  G+ KE + V A
Sbjct: 266 DALCKEGSTKETKNVLA 282



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 126/300 (42%), Gaps = 55/300 (18%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG--------------- 167
           A+I   C+ G+   A  L  +M+     PDV T N LV+ LCK G               
Sbjct: 228 ALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKE 287

Query: 168 --DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
              + KA HV   + + R +P+  +Y   I   C++  +D+AL LF+ M   GI P++VT
Sbjct: 288 VNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVT 347

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST-------------------- 265
           ++ L+  LCK   +  A + L ++ A       +DVIT T                    
Sbjct: 348 YSSLIDGLCKSERISHAWELLDQMHARGQ---PADVITYTSFLHALCKNHQVDKAVALVK 404

Query: 266 ---------------ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                          IL+D   K G    A  ++ D+  K  +  +  YN++ING CL G
Sbjct: 405 KIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEG 464

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
               A     +M   G  PDV+TY T++  L K  +  +A      +   G+  +++  +
Sbjct: 465 LFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKVEIR 524



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 101/272 (37%), Gaps = 68/272 (25%)

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           D+  A + F +ML+    P +I +N +L  L K              S     P  IS  
Sbjct: 26  DVHDAISSFYRMLRMNPSPSIIEFNKILGSLVK--------------SNNNNYPIAISLY 71

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
             +Q               L+ +  S+V     +N +I+ Y   G++  AFS+   +L  
Sbjct: 72  HRLQ---------------LNAITPSIVT----FNTVINCYCHLGEMDFAFSVLAKILKM 112

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G   +  T   LI      G + +A      ++  G   +  +Y +LI   C +G    A
Sbjct: 113 GYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAA 172

Query: 491 LQ-----------------------------------LYDEMLRRGITPDIITYTELIKG 515
           LQ                                   LY +M+ + ++PD++T++ LI G
Sbjct: 173 LQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYG 232

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            C  G  KEA  +F ++    +  D   F IL
Sbjct: 233 FCMVGQFKEAFGLFHEMVLTNINPDVCTFNIL 264


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 213/437 (48%), Gaps = 6/437 (1%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K    + L  +M   G   ++ T++  +N  C+   L  A  ++ +M ++   P+  T N
Sbjct: 90  KFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLN 149

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
           + + G+C  N + +A+ L   M   G +P+ VT   LVH L +     +AV  +  ++  
Sbjct: 150 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                  D++T   +++   K G+   AL L N M +  I+ D+V YN +I+G C    +
Sbjct: 210 G---CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHM 266

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             AF  F +M  +G  PDV TYN L++CLC  G+  +AS     + +  + PD + +  +
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326

Query: 373 IQGLCIHGDIVKAREFLLSMLE-KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           I      G +V+A +    M++ K   P+   +N +I G+ +   +     +   M   G
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N  T+  LI    +     +A  + K+M+ DG+ PD+ TYN+L+   CN G++  AL
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            +++ M +R +  DI+TYT +I+  C  G +++  ++F  +   G+  + + +  +   +
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 506

Query: 552 RR--MKESDKARDIHQK 566
            R  +KE   A  +  K
Sbjct: 507 CRKGLKEEADALFVEMK 523



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 218/437 (49%), Gaps = 6/437 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I   C   ++  AL +  KM++ G  P ++T N L+N  C    + +A  ++ +M EM  
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+  T+   + G  + N+  +A+ L   M   G +P+ VT+  +++ LCK+G    A+ 
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L ++   + GK  +DV+    ++D   K      A  L+N M  K I+ D+  YN LI+
Sbjct: 237 LLNKM---EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG-VA 363
             C  G  S A      ML++   PD++ +N L++   K+GKL EA   Y  + K+    
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y T+I+G C +  + +  E    M ++ +V     +  +I G+ +  D  NA  +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+S GV  ++ T+N L+      G++  A  + + M    +  D+ TY  +I A C 
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +     L+  +  +G+ P+++TYT ++ G C +G  +EA+ +F +++  G   +   
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533

Query: 544 FRILKKRYRRMKESDKA 560
           +  L +   R+++ D+A
Sbjct: 534 YNTLIR--ARLRDGDEA 548



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 194/416 (46%), Gaps = 39/416 (9%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K   A+ L  +M+ KG  PD++T+  ++N LCK G+ + A +++ +M + +   +   YN
Sbjct: 195 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYN 254

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I G C+   +D A  LF+ M   GI+P+  T+N L+  LC  G   DA + L      
Sbjct: 255 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL------ 308

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                                           +DM +KNI  D+V +N LI+ F   G +
Sbjct: 309 --------------------------------SDMLEKNINPDLVFFNALIDAFVKEGKL 336

Query: 313 SSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
             A   + +M+K +   PDV+ YNTL+   CK  +++E    +  +S+ G+  + ++Y T
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G     D   A+     M+   V P+   +N+++DG    G++  A  + + M    
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  ++ T+  +I A  + G + D + L   + L G+ P+V TY  ++   C  G    A 
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            L+ EM   G  P+  TY  LI+     G+   + E+  ++++ G A D   F ++
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 157/327 (48%), Gaps = 4/327 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  +I  LC    +  A  L  KM  KG  PDV T+N L++ LC  G    A 
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG-IRPNRVTHNILVHA 232
            ++ +M E   +P+   +NA I  + +  +L +A  L+  M  +    P+ V +N L+  
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
            CK   + + ++   E+          + +T T L+  +F+  D   A  ++  M    +
Sbjct: 366 FCKYKRVEEGMEVFREM---SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             DI+ YN+L++G C NG++ +A   F  M KR    D++TY T++  LCK GK+++   
Sbjct: 423 HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD 482

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            +  LS  GV P+ ++Y T++ G C  G   +A    + M E   +P    +N +I    
Sbjct: 483 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL 542

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           R GD + +  +   M S G + +  TF
Sbjct: 543 RDGDEAASAELIKEMRSCGFAGDASTF 569



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 165/363 (45%), Gaps = 2/363 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   + AVI  LC  G+   AL L  KM +     DV+ +N +++ LCK   ++ A  
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  +M      P+  TYN  I+  C       A  L S M    I P+ V  N L+ A  
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G L +A K   E++         DV+    L+  + K     + + ++ +M Q+ +  
Sbjct: 332 KEGKLVEAEKLYDEMVKSK--HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           + V Y  LI+GF    D  +A   F QM+  G  PD++TYN LL+ LC  G ++ A   +
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + K  +  D ++Y T+I+ LC  G +    +   S+  K V P    +  ++ G+ R 
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 509

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G    A ++   M   G   N  T+N LI A  R G    +  L KEM   G   D  T+
Sbjct: 510 GLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569

Query: 475 NLL 477
            L+
Sbjct: 570 GLV 572



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 165/340 (48%), Gaps = 15/340 (4%)

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           GL GD VK           +    ++  + L+ +  K       ++L   M    I  ++
Sbjct: 61  GLFGDMVK----------SRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 110

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y++ IN FC    +S A A   +M+K G+ P ++T N+LLN  C   ++ EA      
Sbjct: 111 YTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 170

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + + G  PD +++ T++ GL  H    +A   +  M+ K   P+   +  +I+G  + G+
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
              A ++ + M    + ++V  +N +I    +   + DAF L  +M   GI PDVFTYN 
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK-IQTL 535
           LI   CN G    A +L  +ML + I PD++ +  LI      G + EAE+++ + +++ 
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350

Query: 536 GLAIDHIPFRILKK---RYRRMKESDKA-RDIHQKWLLRN 571
               D + +  L K   +Y+R++E  +  R++ Q+ L+ N
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 34/261 (13%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQ-KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           A+I      GK+  A  L  +M++ K   PDV+ +N L+   CK   +E+   V REMS+
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
                N  TY   I G+ +  + D A  +F  M ++G+ P+ +T+NIL+  LC  G +  
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444

Query: 242 A----------------------VKFLGEVLADDDG----------KATSDVITSTILMD 269
           A                      ++ L +    +DG              +V+T T +M 
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
            + + G K +A AL+ +M +     +   YN LI     +GD +++     +M   GF  
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAG 564

Query: 330 DVITYNTLLNCLCKQGKLDEA 350
           D  T+  + N L   G+LD++
Sbjct: 565 DASTFGLVTNML-HDGRLDKS 584



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 55/120 (45%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I  LC  GK+     L   +  KG  P+V+T+  +++  C+ G  E+AD
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM E  P PN  TYN  I    R  +   +  L   M + G   +  T  ++ + L
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 211/418 (50%), Gaps = 3/418 (0%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P+ +T   L+  LC  G + +A      +  M    +   Y   I G C+V E   A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           L L   +  N ++PN V ++ ++  +CK   + DA     E+++      + +V+T + L
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG---ISPNVVTYSAL 238

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +  +F  G    A+ L+N M  +NI+ D+  +N+L++GFC +G +      F  M+K+G 
Sbjct: 239 ISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI 298

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+V+TY +L++  C   ++++A      +S+ GV PD  SY  +I G C    + +A  
Sbjct: 299 KPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMN 358

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M  K ++P+   +N +IDG  + G +S A  + D M   GV  ++ T+++++ A  
Sbjct: 359 LFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALC 418

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +   +  A +L  ++   GI P+++TY +LI   C  G +  A  +++++L +G    + 
Sbjct: 419 KNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVN 478

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           TYT +I G C +G   EA  + +K++      D + + I+ +      E+DKA  + +
Sbjct: 479 TYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLRE 536



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 210/406 (51%), Gaps = 3/406 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I+ LCL G+I  AL     ++  G   D + +  L++ LCK+G+   A  ++R +   
Sbjct: 132 TLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGN 191

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   Y+  I G C+   ++ A  L+S M + GI PN VT++ L+      G L DA
Sbjct: 192 LVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDA 251

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    +++ ++      DV T  IL+D + K+G   +   ++  M ++ I+ ++V Y  L
Sbjct: 252 IDLFNKMILEN---IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSL 308

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+CL  +++ A +    M +RG  PD+ +YN L++  CK  K+DEA + +  +    +
Sbjct: 309 MDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHI 368

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y ++I GLC  G I  A + +  M ++ V P+   ++ I+D   +   +  A +
Sbjct: 369 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIA 428

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   +   G+  N++T+  LI    +GG + DA ++ +++L+ G    V TY ++I   C
Sbjct: 429 LLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFC 488

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           N G    AL L  +M      PD +TY  +I+    +    +AE++
Sbjct: 489 NKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 187/420 (44%), Gaps = 48/420 (11%)

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI-------- 219
           D+  A  +   +    P+P    +N  +    +       L L   M   GI        
Sbjct: 56  DVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQ 115

Query: 220 --------RPNRVTHNILVHALCKKGLLGDAVKFLGEVLA-----DDDGKAT-------- 258
                    PN +T   L+  LC KG +  A+ F   V+A     D  G  T        
Sbjct: 116 HPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKV 175

Query: 259 -------------------SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
                               +V+  + ++D   K+     A  L+++M  K I  ++V Y
Sbjct: 176 GETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTY 235

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           + LI+GF   G +  A   F +M+     PDV T+N L++  CK GK+ E    + ++ K
Sbjct: 236 SALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMK 295

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ P+ ++Y +++ G C+  ++ KA+  L +M ++ V P+   +N++IDG+ +   +  
Sbjct: 296 QGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDE 355

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A ++   M    +  +V T+N+LI    + G I  A  L  EM   G+ PD+ TY+ ++ 
Sbjct: 356 AMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILD 415

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           A C    +  A+ L  ++  +GI P++ TYT LI G C  G +++A  +F  +   G  I
Sbjct: 416 ALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNI 475



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 161/320 (50%), Gaps = 20/320 (6%)

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG--- 326
           ++  N D   A +L++ + ++N     + +N ++     +    +  +   QM   G   
Sbjct: 50  TFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINP 109

Query: 327 -------------FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
                        + P+ IT+ TL+  LC +G++ +A  F+  +   G   DQ+ Y T+I
Sbjct: 110 VLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLI 169

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            GLC  G+   A + L  +    V P   +++ IIDG  +   +++AF +   M+S G+S
Sbjct: 170 HGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGIS 229

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            NV T++ALI      G + DA  L  +M+L+ I PDV+T+N+L+   C  G +     +
Sbjct: 230 PNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTV 289

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           +  M+++GI P+++TY  L+ G+C    + +A+ +   +   G+  D   + IL   + +
Sbjct: 290 FAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCK 349

Query: 554 MKESDKA----RDIHQKWLL 569
           +K+ D+A    +++H K ++
Sbjct: 350 IKKVDEAMNLFKEMHHKHII 369



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 118/231 (51%), Gaps = 3/231 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           CL  ++  A  +   M Q+G  PD+ ++N L++  CKI  +++A ++ +EM      P+ 
Sbjct: 313 CLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDV 372

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN+ I G C++ ++  AL L   M + G+ P+ +T++ ++ ALCK   +  A+  L +
Sbjct: 373 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTK 432

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +    D     ++ T TIL+D   K G    A  ++ D+  K     +  Y V+I+GFC 
Sbjct: 433 L---KDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCN 489

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
            G    A A   +M     +PD +TY  ++  L  + + D+A     ++++
Sbjct: 490 KGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMITR 540



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/306 (21%), Positives = 120/306 (39%), Gaps = 58/306 (18%)

Query: 270 SYF--KNGDKFQAL--ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           SYF  K    FQ L    +N +   + + + + Y+ +   F  N D+  AF+ F ++L++
Sbjct: 11  SYFVPKKFHSFQFLKNTHFNFIPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQ 70

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
              P  I +N +L      G L ++ H++ VLS +     Q+ ++ I   +  H      
Sbjct: 71  NPTPPAIEFNKIL------GSLVKSKHYHTVLSLS----QQMEFEGI-NPVLFH------ 113

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
                          PH                       LM   G   N  TF  LI  
Sbjct: 114 ------------FQHPH----------------------QLM---GYHPNTITFTTLIKG 136

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
               G I  A      ++  G   D   Y  LI   C +G    AL L   +    + P+
Sbjct: 137 LCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPN 196

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           ++ Y+ +I G C   ++ +A ++++++ + G++ + + +  L   +  + +   A D+  
Sbjct: 197 VVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFN 256

Query: 566 KWLLRN 571
           K +L N
Sbjct: 257 KMILEN 262


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 222/474 (46%), Gaps = 9/474 (1%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L + L  L TM+  G     L  D   +  ++   C  G +G A  L  +M + G  P  
Sbjct: 224 LADALATLSTMQGFG-----LSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQ 278

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+N LV+   ++G +++A  V+  M+     P+  TYN    G C+  ++D+A  L   
Sbjct: 279 PTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDE 338

Query: 214 MANNGIR-PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
           M   G   P+ VT+N LV A  K     DA++ L E+    D      ++T  I++ S  
Sbjct: 339 MERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEM---RDKGVKPTLVTHNIVVKSLC 395

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G   +AL     + ++ +  D++ YN LI+ +C  G+++ AF    +M+ +G   D  
Sbjct: 396 KEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTF 455

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           T NT+L  LCK  + ++A        + G  PD++SY T++       +   A      M
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +E+ ++P    +N +I G  R   L  A    +  +  G+  +  T+N +I A  + G +
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDL 575

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +AF    +M+ +   PDV T N L+   C  G +  AL+L++  + +G   D+ITY  L
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTL 635

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           I+  C  G++  A   F  ++  GL  D   + ++         S++A ++  K
Sbjct: 636 IQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHK 689



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 205/432 (47%), Gaps = 2/432 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  AL     M   G  PD +T+N L+N  C+ G L +A  ++  M     +P  
Sbjct: 219 CSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQ 278

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN  ++ + R+  + +A  +  +M   G  P+  T+N+L   LC+ G + +A +   E
Sbjct: 279 PTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDE 338

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +  +  G A  DV+T   L+D+ FK      AL L  +M  K ++  +V +N+++   C 
Sbjct: 339 M--ERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCK 396

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G +  A     ++ + G  PDVITYNTL++  CK G + +A      +   G+  D  +
Sbjct: 397 EGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFT 456

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
             T++  LC       A E L S  ++  VP+   +  ++  Y +  +   A  + D M+
Sbjct: 457 LNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMI 516

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
              +  ++ T+N LI    R   + +A     E +  G+ PD  TYN++I A C  G + 
Sbjct: 517 ERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLE 576

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A + +++M+     PD++T   L+ G C  G + +A ++F      G  +D I +  L 
Sbjct: 577 NAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLI 636

Query: 549 KRYRRMKESDKA 560
           +   ++ + D A
Sbjct: 637 QSMCKVGDVDTA 648



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 200/417 (47%), Gaps = 7/417 (1%)

Query: 127 DLCLGGKIGT-ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           D C   +  + AL L  +M  KG  P ++THN +V  LCK G LE+A   + +++E   +
Sbjct: 357 DACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLA 416

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  TYN  I  YC+   + KA  L   M   G++ +  T N +++ LCK     DA + 
Sbjct: 417 PDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEEL 476

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L    +        D ++   +M +YFK  +   AL LW+ M ++ +   I  YN LI G
Sbjct: 477 LH---SPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKG 533

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C    +  A     + +++G +PD  TYN +++  CK+G L+ A  F+  + +    PD
Sbjct: 534 LCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPD 593

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++  T++ GLC+HG + KA +   S +EK    +   +N +I    + GD+  A    D
Sbjct: 594 VVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFD 653

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   G+  + FT+N ++ A +  G   +A ++  ++   G     F   LL  +S +  
Sbjct: 654 DMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEA 713

Query: 486 HI--HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            +  H   +   E   +     + TY E + G C  G +KEA+ V  ++   G+ +D
Sbjct: 714 DVKEHEG-KPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVD 769



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 143/285 (50%), Gaps = 1/285 (0%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           +L ++  + +  +  +   +N+L++  C  G ++ A A    M   G  PD +TYNTLLN
Sbjct: 192 SLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLN 251

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C++G L EA      + + G+AP Q +Y T++      G I +A + + SM      P
Sbjct: 252 AHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEP 311

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS-SNVFTFNALILAETRGGSIFDAFSL 458
           +   +NV+  G  + G +  AF ++D M   G +  +V T+N L+ A  +     DA  L
Sbjct: 312 DLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRL 371

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            +EM   G+ P + T+N+++ + C  G +  AL   +++   G+ PD+ITY  LI  +C 
Sbjct: 372 LEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCK 431

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            GN+ +A  +  ++   GL +D      +     +MK  + A ++
Sbjct: 432 AGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEEL 476



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 166/384 (43%), Gaps = 49/384 (12%)

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCR-VNELDKA-LHLFSTMANNGIRPNRVTHNILVH 231
           H +R    +RPS   A  NA ++   R  + L +A L +F ++    + PN  T N+LVH
Sbjct: 159 HSLRRRRGVRPSLQAA--NAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVH 216

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
             C KG L DA                                      LA  + M    
Sbjct: 217 THCSKGTLADA--------------------------------------LATLSTMQGFG 238

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           +  D V YN L+N  C  G +  A A   +M + G  P   TYNTL++   + G + +A+
Sbjct: 239 LSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQAT 298

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK--SVVPEPHIWNVIID 409
                ++  G  PD  +Y  +  GLC  G + +A   L   +E+  + +P+   +N ++D
Sbjct: 299 KVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFR-LKDEMERLGTALPDVVTYNTLVD 357

Query: 410 G--YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
                RC   S+A  + + M   GV   + T N ++ +  + G + +A    +++  +G+
Sbjct: 358 ACFKWRCS--SDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGL 415

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PDV TYN LI A C  G++  A  L DEM+ +G+  D  T   ++   C     ++AEE
Sbjct: 416 APDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEE 475

Query: 528 VFAKIQTLGLAIDHIPFRILKKRY 551
           +       G   D + +  +   Y
Sbjct: 476 LLHSPPQRGFVPDEVSYGTVMAAY 499



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 113/253 (44%), Gaps = 7/253 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           LKE +D+L    + G     L  D   +  +I   C  G +  A     KM++    PDV
Sbjct: 540 LKEAIDKLNEFVEKG-----LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDV 594

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T N L+N LC  G L+KA  +     E     +  TYN  I   C+V ++D ALH F  
Sbjct: 595 VTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDD 654

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G++P+  T+N+++ AL + G   +A   L ++   D GK +       +   S  +
Sbjct: 655 MEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLA--DSGKLSQSFACPLLKPSSADE 712

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
              K        +  +K     +  Y   +NG C  G +  A A   +M+++G   D  T
Sbjct: 713 ADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCST 772

Query: 334 YNTLLNCLCKQGK 346
           Y TL+  L K+ K
Sbjct: 773 YITLMEGLIKRQK 785


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 201/403 (49%), Gaps = 3/403 (0%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T L L  +M   G  PDV T N L+N  C +  L  A  V+ ++ ++   P+  T+N  I
Sbjct: 130 TVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLI 189

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   ++ +ALHLF      G +P+ VT+  L++ LCK G    A++ L  ++  +  
Sbjct: 190 RGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN-- 247

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               +VI    ++DS  K+    +A  L+++M  K I  DI  YN LI+  C   +    
Sbjct: 248 -CRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHV 306

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                +M+    +P+V+ ++T+++ LCK+G +  A     ++ K GV PD ++Y  ++ G
Sbjct: 307 TTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDG 366

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C+  ++ +A +   +M+ K  VP    +N++I+GY +   +  A  + + M   G+ ++
Sbjct: 367 HCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIAD 426

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             T+N LI      G +  A +L  EM+  G  PD+ TY +L+   C   H+  A+ L  
Sbjct: 427 TVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK 486

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            +    +  DI+ Y   I G C  G ++ A ++F+ +   G A
Sbjct: 487 AIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGFA 529



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 203/427 (47%), Gaps = 3/427 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL    +M+     P  +    L+  + K+        +  +M      P+  T N  I 
Sbjct: 96  ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILIN 155

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            +C +  L  A  + + +   G +P+  T N L+  LC +G +G+A+    + + +    
Sbjct: 156 SFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG--- 212

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              DV+T   LM+   K G+   A+ L   M QKN + +++AYN +I+  C +  ++ AF
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F +M+ +G  PD+ TYN+L++ LC   +    +     +  + + P+ + + T++  L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G I  A + +  M+++ V P+   +  ++DG+    ++  A  + D M+  G   NV
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            ++N LI    +   +  A  L ++M L G+  D  TYN LI   C++G +  A+ L+ E
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M+  G  PD++TY  L+   C   ++ EA  +   I+   L  D + + I      R  E
Sbjct: 453 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 512

Query: 557 SDKARDI 563
            + ARD+
Sbjct: 513 LEAARDL 519



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 170/332 (51%), Gaps = 3/332 (0%)

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L DA+     +L      +T D    T L+ S  K       L+L   M    I  D+  
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDF---TKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYT 149

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
            N+LIN FC    +  AF+   ++LK G  PD  T+NTL+  LC +GK+ EA H +    
Sbjct: 150 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 209

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G  PD ++Y T++ GLC  G+   A   L SM++K+  P    +N IID   +   ++
Sbjct: 210 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 269

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            AF++   M++ G+S ++FT+N+LI A           +L  EM+   I P+V  ++ ++
Sbjct: 270 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            A C  G I +A  + D M++RG+ PD++TYT L+ GHC R  M EA +VF  +   G  
Sbjct: 330 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 389

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            +   + IL   Y +++  DKA  + ++  L+
Sbjct: 390 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ 421



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 173/344 (50%), Gaps = 3/344 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +IR LC+ GKIG AL L  K I +G  PDV+T+  L+N LCK+G+   A  ++R M + 
Sbjct: 187 TLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK 246

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   YN  I   C+  ++ +A +LFS M   GI P+  T+N L+HALC        
Sbjct: 247 NCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHV 306

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E++   + K   +V+  + ++D+  K G    A  + + M ++ ++ D+V Y  L
Sbjct: 307 TTLLNEMV---NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTAL 363

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G CL  ++  A   F  M+ +G +P+V +YN L+N  C+  ++D+A      +S  G+
Sbjct: 364 MDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGL 423

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D ++Y T+I GLC  G +  A      M+    +P+   + +++D   +   L+ A  
Sbjct: 424 IADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMV 483

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +   +    + +++  +N  I    R G +  A  L   +   G
Sbjct: 484 LLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 183/379 (48%), Gaps = 3/379 (0%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           L+ A      M  M P P+   +   +T   ++      L L + M + GI P+  T NI
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L+++ C    LG A   L ++L         D  T   L+      G   +AL L++   
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLG---CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 209

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            +  Q D+V Y  L+NG C  G+ S+A      M+++   P+VI YNT+++ LCK  ++ 
Sbjct: 210 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 269

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA + +  +   G++PD  +Y ++I  LC   +       L  M+   ++P   +++ ++
Sbjct: 270 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           D   + G ++ A  + D+M+  GV  +V T+ AL+        + +A  +   M+  G  
Sbjct: 330 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 389

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P+V +YN+LI   C +  +  A+ L ++M  +G+  D +TY  LI G C  G ++ A  +
Sbjct: 390 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIAL 449

Query: 529 FAKIQTLGLAIDHIPFRIL 547
           F ++   G   D + +RIL
Sbjct: 450 FHEMVASGQIPDLVTYRIL 468



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 40/278 (14%)

Query: 52  TLNDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAVF--NALDLILKENLDRLKTMRDTGP 109
           T N ++  + + C  K      N+  +++  P  V     +D + KE +  +        
Sbjct: 289 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 348

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++  +E D   + A++   CL  ++  A+ +   M+ KG VP+V ++N L+N  C+I  +
Sbjct: 349 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 408

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           +KA  ++ +MS      +  TYN  I G C V  L  A+ LF  M  +G  P+ VT+ IL
Sbjct: 409 DKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRIL 468

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LCK   L +A+  L  +    +G                                  
Sbjct: 469 LDYLCKNHHLAEAMVLLKAI----EG---------------------------------- 490

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
            N+  DI+ YN+ I+G C  G++ +A   F  +  +GF
Sbjct: 491 SNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGF 528


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 185/385 (48%), Gaps = 38/385 (9%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           ++  G  P+    N L+ ++ + G L  A +V  EM      P   T+N  ++G C+ ++
Sbjct: 233 LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD 292

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           L+ A  L   MA  GI P+  T+   +  LCK G + DA++   E+    +     + + 
Sbjct: 293 LNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMC---ERGLNPNTVV 349

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            T L+D++ K GD    L L  +M  + ++ D+VAYN L+NGFC   D+ +A     +M 
Sbjct: 350 LTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMR 409

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           K G  PD +TY TL++  CK+G+LD A      +S  GVA D ++Y  +I GL   G  V
Sbjct: 410 KDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSV 469

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A   L  M+E  + P+   + ++ID + + GD+   F                      
Sbjct: 470 DAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFK--------------------- 508

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                         LK EM   G  P + TYN+++   C+LG +  A  L + ML  G+ 
Sbjct: 509 -------------HLK-EMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVC 554

Query: 504 PDIITYTELIKGHCARGNMKEAEEV 528
           P+ ITY  L+ GHC  G +++ EE+
Sbjct: 555 PNDITYNILLDGHCKHGKVRDTEEL 579



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 179/365 (49%), Gaps = 6/365 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  + R+   ++RD+   GK+ +A  +  +M+++G  P V+T N L++ +CK  DL  A+
Sbjct: 238 VPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNAN 297

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M++   +P+  TY AFI G C+   +  A+ +F  M   G+ PN V    L+ A 
Sbjct: 298 ALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAH 357

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G +   ++   E +A    KA  D++    L++ + +  D   A  +  +M +  ++
Sbjct: 358 CKEGDVTAGLELRWE-MATRGVKA--DLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLK 414

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D V Y  LI+G C  G++ +A     +M   G   D +TY  L++ L K G+  +A   
Sbjct: 415 PDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERI 474

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + + G+ PD  +Y  +I   C +GD+    + L  M  K   P    +NV+++G+  
Sbjct: 475 LCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCS 534

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G + NA  + + ML+ GV  N  T+N L+    + G + D   LK      G+  D   
Sbjct: 535 LGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKSA---KGMVSDFGV 591

Query: 474 YNLLI 478
           Y  LI
Sbjct: 592 YTSLI 596



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 141/269 (52%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A A +  +    +  +   +N+L+     +G ++SA   F +ML+RG  P V+T+NTL+
Sbjct: 225 EAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLM 284

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           + +CK   L+ A+   G+++K G+APD  +Y   IQGLC  G I  A E    M E+ + 
Sbjct: 285 SGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLN 344

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P   +   +ID + + GD++    +R  M + GV +++  +NAL+    R   +  A  +
Sbjct: 345 PNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDI 404

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            +EM  DG+ PD  TY  LI   C  G +  A+++  EM   G+  D +TYT LI G   
Sbjct: 405 VEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSK 464

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G   +AE +  ++   GL  D+  + ++
Sbjct: 465 AGRSVDAERILCEMMEAGLQPDNTTYTMV 493



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 159/348 (45%), Gaps = 3/348 (0%)

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R+  + +A   +  + + G+ P     N+L+  + + G L  A     E+L         
Sbjct: 219 RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRG---VQP 275

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
            V+T   LM    K  D   A AL   M +  I  D+  Y   I G C  G I  A   F
Sbjct: 276 TVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMF 335

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M +RG  P+ +   TL++  CK+G +         ++  GV  D ++Y  ++ G C  
Sbjct: 336 EEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRV 395

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
            D+  A + +  M +  + P+   +  +IDG  + G+L  A  ++  M   GV+ +  T+
Sbjct: 396 RDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTY 455

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
            ALI   ++ G   DA  +  EM+  G+ PD  TY ++I A C  G +    +   EM  
Sbjct: 456 TALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQN 515

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +G  P I+TY  ++ G C+ G MK A+ +   +  +G+  + I + IL
Sbjct: 516 KGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNIL 563



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 3/244 (1%)

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L+RG    +  ++ L+N L     + EA  FY  L   GV P+   +  +++ +   G +
Sbjct: 202 LRRGIRVPMPAWSDLMNRL---PSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKL 258

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             AR     ML + V P    +N ++ G  +  DL+NA ++R LM   G++ +V+T+ A 
Sbjct: 259 ASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAF 318

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    + G I DA  + +EM   G+ P+      LI A C  G +   L+L  EM  RG+
Sbjct: 319 IQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGV 378

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             D++ Y  L+ G C   +MK A ++  +++  GL  D + +  L     +  E D A +
Sbjct: 379 KADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAME 438

Query: 563 IHQK 566
           + Q+
Sbjct: 439 MKQE 442



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 11/213 (5%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           +K   D ++ MR  G     L+ D   +  +I   C  G++ TA+ ++++M  +G   D 
Sbjct: 398 MKAANDIVEEMRKDG-----LKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDD 452

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+  L++ L K G    A+ ++ EM E    P+  TY   I  +C+  ++         
Sbjct: 453 VTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKE 512

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M N G  P  VT+N++++  C  G + +A   L  +L  + G   +D IT  IL+D + K
Sbjct: 513 MQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAML--NIGVCPND-ITYNILLDGHCK 569

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
           +G       L +    K + +D   Y  LIN F
Sbjct: 570 HGKVRDTEELKS---AKGMVSDFGVYTSLINEF 599


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 201/399 (50%), Gaps = 6/399 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM++ G  PD++T   L+N  C    +E+A  ++ +M EM   P+   Y   I   C+  
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            ++ AL LF  M N GIRP+ V +  LV+ LC  G   DA   L  +      K   DVI
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR---KIKPDVI 248

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   L+D++ K G    A  L+N+M + +I  +I  Y  LINGFC+ G +  A   F  M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
             +G  PDV+ Y +L+N  CK  K+D+A   +  +S+ G+  + I+Y T+IQG    G  
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF---GVSSNVFTF 439
             A+E    M+ + V P    +NV++      G +  A  I + M      GV+ N++T+
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N L+      G +  A  + ++M    +   + TY ++I   C  G +  A+ L+  +  
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
           +G+ P+++TYT +I G    G   EA  +F K++  G++
Sbjct: 489 KGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 227/459 (49%), Gaps = 11/459 (2%)

Query: 92  LILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           L   E LD    M ++ P+   +  D+ + + VI  +    K    + L   +   G   
Sbjct: 51  LQFNEALDLFTHMVESRPLPSII--DFTKLLNVIAKM---KKFDVVINLCDHLQIMGVSH 105

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D+ T N L+N  C+      A   + +M ++   P+  T+ + I G+C  N +++A+ + 
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
           + M   GI+P+ V +  ++ +LCK G +  A+    ++   ++     DV+  T L++  
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM---ENYGIRPDVVMYTSLVNGL 222

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
             +G    A +L   M ++ I+ D++ +N LI+ F   G    A   + +M++    P++
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            TY +L+N  C +G +DEA   + ++   G  PD ++Y ++I G C    +  A +    
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M +K +      +  +I G+G+ G  + A  +   M+S GV  N+ T+N L+      G 
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402

Query: 452 IFDAFSLKKEML---LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
           +  A  + ++M    +DG+ P+++TYN+L+   C  G +  AL ++++M +R +   IIT
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           YT +I+G C  G +K A  +F  + + G+  + + +  +
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTM 501



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 184/377 (48%), Gaps = 11/377 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E +  +  M + G     ++ D   +  +I  LC  G +  AL L  +M   G  PDV
Sbjct: 158 MEEAMSMVNQMVEMG-----IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDV 212

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           + +  LVN LC  G    AD ++R M++ +  P+  T+NA I  + +  +   A  L++ 
Sbjct: 213 VMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNE 272

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M    I PN  T+  L++  C +G + +A +     L +  G    DV+  T L++ + K
Sbjct: 273 MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF--YLMETKG-CFPDVVAYTSLINGFCK 329

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                 A+ ++ +M QK +  + + Y  LI GF   G  + A   F  M+ RG  P++ T
Sbjct: 330 CKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRT 389

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKT---GVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           YN LL+CLC  GK+ +A   +  + K    GVAP+  +Y  ++ GLC +G + KA     
Sbjct: 390 YNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFE 449

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M ++ +      + +II G  + G + NA ++   + S GV  NV T+  +I    R G
Sbjct: 450 DMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREG 509

Query: 451 SIFDAFSLKKEMLLDGI 467
              +A  L ++M  DG+
Sbjct: 510 LKHEAHVLFRKMKEDGV 526



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 142/279 (50%)

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           +  D+   N+L+N FC +     A ++  +M+K GF PD++T+ +L+N  C   +++EA 
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                + + G+ PD + Y TII  LC +G +  A      M    + P+  ++  +++G 
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
              G   +A S+   M    +  +V TFNALI A  + G   DA  L  EM+   I P++
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
           FTY  LI   C  G +  A Q++  M  +G  PD++ YT LI G C    + +A ++F +
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +   GL  + I +  L + + ++ + + A+++    + R
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 152/323 (47%), Gaps = 6/323 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   + +++  LC  G+   A  L R M ++   PDV+T N L++   K G    A+
Sbjct: 208 IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAE 267

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM  M  +PN  TY + I G+C    +D+A  +F  M   G  P+ V +  L++  
Sbjct: 268 ELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   + DA+K   E+        T + IT T L+  + + G    A  +++ M  + + 
Sbjct: 328 CKCKKVDDAMKIFYEM---SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKR---GFLPDVITYNTLLNCLCKQGKLDEA 350
            +I  YNVL++  C NG +  A   F  M KR   G  P++ TYN LL+ LC  GKL++A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +  + K  +    I+Y  IIQG+C  G +  A     S+  K V P    +  +I G
Sbjct: 445 LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504

Query: 411 YGRCGDLSNAFSIRDLMLSFGVS 433
             R G    A  +   M   GVS
Sbjct: 505 LFREGLKHEAHVLFRKMKEDGVS 527



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 138/285 (48%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +AL L+  M +      I+ +  L+N                 +   G   D+ T N L+
Sbjct: 55  EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           NC C+  +   AS F G + K G  PD +++ ++I G C+   + +A   +  M+E  + 
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P+  ++  IID   + G ++ A S+ D M ++G+  +V  + +L+      G   DA SL
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            + M    I PDV T+N LI A    G    A +LY+EM+R  I P+I TYT LI G C 
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            G + EA ++F  ++T G   D + +  L   + + K+ D A  I
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 142/280 (50%), Gaps = 5/280 (1%)

Query: 87  FNAL-DLILKEN--LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRK 143
           FNAL D  +KE   LD  +   +   +R ++  +   + ++I   C+ G +  A  +   
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEM--IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M  KG  PDV+ +  L+N  CK   ++ A  +  EMS+   + N  TY   I G+ +V +
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            + A  +FS M + G+ PN  T+N+L+H LC  G +  A+    ++   +      ++ T
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             +L+     NG   +AL ++ DM ++ +   I+ Y ++I G C  G + +A   FC + 
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            +G  P+V+TY T+++ L ++G   EA   +  + + GV+
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 208/413 (50%), Gaps = 19/413 (4%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T L L  +M  KG  PD+ T + L+N  C +G +  A  V  ++ +M             
Sbjct: 85  TVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKM------------- 131

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   ++++AL     +   G   N VT+ IL++ LCK G    A++ L ++    +G
Sbjct: 132 -GLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQI----EG 186

Query: 256 K-ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           K   ++V+  + ++D   K+     A  L+++M  K I   +V ++ LI GFC+ G    
Sbjct: 187 KLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKD 246

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           AF  F +M+ +   PD  T+N L++ LCK+GK+ EA +   V+ K GV P  ++Y T++ 
Sbjct: 247 AFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMD 306

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C+  ++ KA+  L  +    V P    +N++I+G+ +   +  A  +   M   G++ 
Sbjct: 307 GYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAP 366

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +  T+N+LI    + G I  A+ L  EM  + I  D+ TYN LI   C   H+  A+ L 
Sbjct: 367 HKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALV 426

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            ++   GI P++ TY  LI G C  G +K A++VF  +   G  ++   + I+
Sbjct: 427 KKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIM 479



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 202/418 (48%), Gaps = 3/418 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LCL GK+  AL     ++  G   + +T+  L+N LCK+G    A  V+R++     + N
Sbjct: 133 LCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTN 192

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
              Y+  I G C+   +  A  L+S M    I P  VT + L++  C  G   DA +   
Sbjct: 193 VVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFN 252

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E++  +      D  T  IL+D+  K G   +A  +   M ++ ++  +V YN L++G+C
Sbjct: 253 EMVMKN---INPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYC 309

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
           L  ++  A      + +    P+  +YN ++N  CK   +DEA   +  +   G+AP ++
Sbjct: 310 LVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKV 369

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y ++I GLC  G I  A E +  M    +  +   +N +ID + +   +  A ++   +
Sbjct: 370 TYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKI 429

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              G+  N+ T+N LI    +GG + +A  + +++L+ G   + +TYN++I   C  G  
Sbjct: 430 KEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLF 489

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
             A  L  +M   GI PD +TY  +I+    +   ++A+++  ++   G+ +     R
Sbjct: 490 DEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIR 547



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 186/380 (48%), Gaps = 3/380 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G+   AL + R++  K    +V+ ++ +++ LCK   +  A  +  EM   R
Sbjct: 164 LINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKR 223

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P   T+++ I G+C V +   A  LF+ M    I P+  T NILV ALCK+G + +A 
Sbjct: 224 IPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAK 283

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             +  ++ +        V+T   LMD Y    +  +A  + + + +  +  +  +YN++I
Sbjct: 284 NVIAVMMKEG---VEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMI 340

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NGFC    +  A   F +M  RG  P  +TYN+L++ LCK G++  A      +    + 
Sbjct: 341 NGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIP 400

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D ++Y ++I   C +  + KA   +  + E  + P    +N++IDG  + G L NA  +
Sbjct: 401 ADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDV 460

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              +L  G + N +T+N +I    + G   +A  L  +M  +GI PD  TY  +I A  +
Sbjct: 461 FQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFH 520

Query: 484 LGHIHLALQLYDEMLRRGIT 503
                 A +L  EM+ +G+ 
Sbjct: 521 KDENEKAQKLLREMVIKGVV 540



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 153/311 (49%), Gaps = 38/311 (12%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C+ GK   A  L  +M+ K   PD  T N LV+ LCK G +++A +VI  M + 
Sbjct: 233 SLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKE 292

Query: 183 RPSPNCATYNAFITGYCRVNELDKALH--------------------------------- 209
              P   TYN  + GYC VNE+ KA H                                 
Sbjct: 293 GVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEA 352

Query: 210 --LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             LF  M   GI P++VT+N L+  LCK G +  A + + E+    +    +D++T   L
Sbjct: 353 LCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEM---HNNCIPADIVTYNSL 409

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D + KN    +A+AL   + +  IQ ++  YN+LI+G C  G + +A   F  +L +G+
Sbjct: 410 IDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGY 469

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             +  TYN ++N LCK+G  DEA      +   G+ PD ++Y+TIIQ L    +  KA++
Sbjct: 470 NVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQK 529

Query: 388 FLLSMLEKSVV 398
            L  M+ K VV
Sbjct: 530 LLREMVIKGVV 540



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 107/253 (42%), Gaps = 38/253 (15%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  +  + R +  +I   C    +  AL L  +M  +G  P  +T+N L++ LCK G + 
Sbjct: 326 RMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIP 385

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A  ++ EM       +  TYN+ I  +C+   +DKA+ L   +  +GI+PN  T+NIL+
Sbjct: 386 YAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILI 445

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LCK G L +A                                 D FQ      D+  K
Sbjct: 446 DGLCKGGQLKNA--------------------------------QDVFQ------DLLIK 467

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
               +   YN++ING C  G    A     +M   G +PD +TY T++  L  + + ++A
Sbjct: 468 GYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKA 527

Query: 351 SHFYGVLSKTGVA 363
                 +   GV 
Sbjct: 528 QKLLREMVIKGVV 540


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 212/435 (48%), Gaps = 10/435 (2%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS-----PNCATYNAF 194
           L  +M +    P+V+T   L+N LCK   +++A  V  +M+    +     P+  TYN  
Sbjct: 327 LLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTL 386

Query: 195 ITGYCRVNELDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
           I G C+V   ++ L L   M +     PN VT+N L+   CK  ++  A +   ++  + 
Sbjct: 387 IDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQM--NK 444

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
           DG    +V+T   L+D   K+G    A+  +N+M  K ++ + V Y  LI  FC   +I 
Sbjct: 445 DG-VPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIE 503

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A   F +ML+ G  PD I Y TL++ L + GKLD AS     + + G +PD +S+  +I
Sbjct: 504 KAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLI 563

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            G C    + +A E L  M    + P+   +N +I  + + GD S A  +   M+  G+ 
Sbjct: 564 NGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLV 623

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEML-LDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             V T+ ALI A    G++ +A  + ++M     + P+   YN+LI + C    + LAL 
Sbjct: 624 PTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALS 683

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           L D+M  +G+ P+  T+  + KG   +  + +A E+  ++       D+I   IL +   
Sbjct: 684 LMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLS 743

Query: 553 RMKESDKARDIHQKW 567
            + E+ K +   Q +
Sbjct: 744 AVGETAKLKSFVQGY 758



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 193/393 (49%), Gaps = 3/393 (0%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L  K  +    P+ +    L++ LC+ G  ++A  V+  + ++      A+ NA +T   
Sbjct: 257 LVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALG 316

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK--A 257
           R  E  +   L + M    I+PN VT  IL++ LCK   + +A++   ++   +      
Sbjct: 317 RAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLV 376

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDM-FQKNIQTDIVAYNVLINGFCLNGDISSAF 316
             DVIT   L+D   K G + + L L   M  Q     + V YN LI+G+C    I +A 
Sbjct: 377 EPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAAR 436

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F QM K G  P+V+T NTL++ +CK G+++ A  F+  +   G+  + ++Y  +I+  
Sbjct: 437 ELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAF 496

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C   +I KA E    MLE    P+  ++  +I G  + G L  A  +   M   G S ++
Sbjct: 497 CNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDI 556

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            +FN LI    R   + +A+ + KEM   GI PD  TYN LI      G    A +L  +
Sbjct: 557 VSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKK 616

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           M++ G+ P ++TY  LI  +C  GN+ EA ++F
Sbjct: 617 MVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIF 649



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 195/431 (45%), Gaps = 23/431 (5%)

Query: 154 LTH--NYLVNELCKIGDLEKADHVIREMSEMRPS--PNCATYNAFITGYCRVNELDKALH 209
           LTH  N L++ L + G ++ A H++ EM + +    PN  T +   +   + +++ +A+ 
Sbjct: 191 LTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVD 250

Query: 210 ------LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV--LADDDGKATSDV 261
                 L S  A + + PN +    L+  LC+ G    A   L  +  L      A+ + 
Sbjct: 251 EEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNA 310

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           + + +     FK  +   A     +M + +IQ ++V + +LIN  C    +  A   F +
Sbjct: 311 LLTALGRAREFKRMNTLLA-----EMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEK 365

Query: 322 M---LKRGFL--PDVITYNTLLNCLCKQGKLDEASHFYGVL-SKTGVAPDQISYKTIIQG 375
           M      GFL  PDVITYNTL++ LCK G+ +E       + S+    P+ ++Y  +I G
Sbjct: 366 MNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDG 425

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C    I  ARE    M +  V P     N ++DG  + G ++ A    + M   G+  N
Sbjct: 426 YCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGN 485

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             T+ ALI A     +I  A  L  EML  G  PD   Y  LI      G +  A  +  
Sbjct: 486 AVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLS 545

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
           +M   G +PDI+++  LI G C +  + EA E+  +++  G+  D + +  L   + +  
Sbjct: 546 KMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTG 605

Query: 556 ESDKARDIHQK 566
           +   A  + +K
Sbjct: 606 DFSTAHRLMKK 616



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 137/270 (50%), Gaps = 4/270 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+IR  C    I  A+ L  +M++ G  PD + +  L++ L + G L++A  V+ +M 
Sbjct: 489 YTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMK 548

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   SP+  ++N  I G+CR N+LD+A  +   M N GI+P+ VT+N L+    K G   
Sbjct: 549 EAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFS 608

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN-IQTDIVAY 299
            A + + +++ +        V+T   L+ +Y  NG+  +A+ ++ DM   + +  + V Y
Sbjct: 609 TAHRLMKKMVKEG---LVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIY 665

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N+LIN  C    +  A +    M  +G  P+  T+N +   L ++  L +A      +++
Sbjct: 666 NILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTE 725

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
               PD I+ + + + L   G+  K + F+
Sbjct: 726 HACNPDYITMEILTEWLSAVGETAKLKSFV 755



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/392 (21%), Positives = 162/392 (41%), Gaps = 44/392 (11%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH--NILVHALCKKGLLGDA 242
           S N AT    I  + R   +D++  +++ +  +     R+TH  NIL+  L +KG + DA
Sbjct: 158 SVNAATL--LIRCFGRAQMVDESFLVYNELCPS----RRLTHIRNILIDVLFRKGRVDDA 211

Query: 243 VKFLGEVLADD----DGKATSDVITSTILM-DSYFKNGDKFQALALWNDMFQKNIQTDIV 297
           +  L E+L           T  ++ S +   D   +  D+ + + L +   +  +  + +
Sbjct: 212 LHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSI 271

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
               LI+  C +G    A+     ++K G + +  + N LL  L +  +    +     +
Sbjct: 272 WLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEM 331

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
            +  + P+ +++  +I  LC    + +A E    M                      G  
Sbjct: 332 KEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM---------------------NGGE 370

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG-IFPDVFTYNL 476
           SN F          V  +V T+N LI    + G   +   L + M       P+  TYN 
Sbjct: 371 SNGFL---------VEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNC 421

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C    I  A +L+D+M + G+ P+++T   L+ G C  G +  A E F ++Q  G
Sbjct: 422 LIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKG 481

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           L  + + +  L + +  +   +KA ++  + L
Sbjct: 482 LKGNAVTYTALIRAFCNVNNIEKAMELFDEML 513


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 222/445 (49%), Gaps = 3/445 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC  G++  A  L  +M + G +PDV+T N L++   K G+L++ + ++ EM    
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TYNA I  +C+   ++ A   F+ M   G+  N VT +  V A CK+GL+ +A+
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K   ++     G A ++  T T L+D   K G    A+ L ++M ++ +  ++V Y VL+
Sbjct: 314 KLFAQMRVR--GMALNE-FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C    ++ A      M K G   + + Y TL++        ++A      +   G+ 
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLE 430

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D   Y  +IQGLC    + +A+  L  M E  + P   I+  ++D   + G +  A ++
Sbjct: 431 LDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAM 490

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              +L  G   NV T+ ALI    + GSI +A S   +M   G+ P+V  Y  L+   C 
Sbjct: 491 LQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCK 550

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G ++ A+QL++EM+ +G++ D + YT L+ G+  +GN+ +A  + AK+   GL +D   
Sbjct: 551 NGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFC 610

Query: 544 FRILKKRYRRMKESDKARDIHQKWL 568
           +      +  +    +AR++  + +
Sbjct: 611 YTCFISGFCNLNMMPEAREVFSEMI 635



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 218/433 (50%), Gaps = 9/433 (2%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L R++ ++   P+V T N +++ LCK G+L +A  +   M EM   P+  T+N+ I GY 
Sbjct: 175 LVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYG 234

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +  ELD+   L   M  +G + + VT+N L++  CK G +  A  +   +  +      +
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREG---VMA 291

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +V+T +  +D++ K G   +A+ L+  M  + +  +   Y  LI+G C  G +  A    
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M+++G   +V+TY  L++ LCK+ K+ EA     ++ K GV  +++ Y T+I G  ++
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMN 411

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
            +  KA   L  M  K +  +  ++  +I G      L  A S+   M   G+  N   +
Sbjct: 412 KNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIY 471

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
             ++ A  + G + +A ++ +++L  G  P+V TY  LI   C  G I  A+  +++M  
Sbjct: 472 TTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRD 531

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G+ P++  YT L+ G C  G + EA ++F ++   G+++D + +  L   Y       K
Sbjct: 532 LGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYL------K 585

Query: 560 ARDIHQKWLLRNK 572
             ++H  + L+ K
Sbjct: 586 QGNLHDAFALKAK 598



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 206/415 (49%), Gaps = 3/415 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R   + D   + A+I   C  G++ TA      M ++G + +V+T +  V+  CK G + 
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  +  +M     + N  TY   I G C+   LD A+ L   M   G+  N VT+ +LV
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LCK+  + +A   L   + +  G   ++++ +T L+  +F N +  +AL L ++M  K
Sbjct: 371 DGLCKERKVAEAEDVLR--MMEKAGVRANELLYTT-LIHGHFMNKNSEKALGLLSEMKNK 427

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            ++ DI  Y  LI G C    +  A +   +M + G  P+ I Y T+++   K GK+ EA
Sbjct: 428 GLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEA 487

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                 +  +G  P+ I+Y  +I GLC  G I +A      M +  + P    +  ++DG
Sbjct: 488 IAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDG 547

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             + G L+ A  + + M+  G+S +   + AL+    + G++ DAF+LK +M+  G+  D
Sbjct: 548 LCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 607

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           +F Y   I   CNL  +  A +++ EM+  GI PD   Y  LI  +   GN++EA
Sbjct: 608 LFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEA 662



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 5/156 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E +     MRD G     L+ + + + A++  LC  G +  A+ L  +M+ KG   D 
Sbjct: 519 IDEAISHFNKMRDLG-----LDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDK 573

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           + +  L++   K G+L  A  +  +M +     +   Y  FI+G+C +N + +A  +FS 
Sbjct: 574 VVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSE 633

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           M  +GI P+R  +N L+    K G L +A+    E+
Sbjct: 634 MIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 207/430 (48%), Gaps = 3/430 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ L    +IG A  + ++M +KG  P+V+ +N L++ L + G L KA  +   M    
Sbjct: 328 LVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKG 387

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            S   +TYN  I GYC+  + D A  L   M + G   N+ +   ++  LC   +   A+
Sbjct: 388 LSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSAL 447

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +F+GE+L  +       + T   L+    K+G   +A+ LW     K    D    N L+
Sbjct: 448 RFVGEMLLRNMSPGGGLLTT---LISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALL 504

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G +   F    ++L RGF+ D ++YNTL++  C   KLDEA  F   + K G+ 
Sbjct: 505 HGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLK 564

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y  +I+GL     + +A +F        ++P+ + ++V+IDG  +         +
Sbjct: 565 PDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKL 624

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M+S  +  N   +N LI A  R G +  A  L+++M   GI P+  TY  LI     
Sbjct: 625 FDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 684

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           +  +  A  L +EM   G+ P++  YT LI G+   G M + E +  ++ +  +  + I 
Sbjct: 685 ISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 744

Query: 544 FRILKKRYRR 553
           + ++   Y R
Sbjct: 745 YTVMIGGYAR 754



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 232/489 (47%), Gaps = 24/489 (4%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E ++    M + G V      +   +  VI  L + G+   A   + KM+++G  P +
Sbjct: 268 VEEAIELFSKMEEAGVV-----PNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTL 322

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T++ LV  L K   +  A  V++EM+E    PN   YN  I        L+KA+ +   
Sbjct: 323 ITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDL 382

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA----DDDGKATSDV--ITSTIL 267
           M + G+     T+N L+   CK G    A + L E+L+     + G  TS +  + S  +
Sbjct: 383 MVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHM 442

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
            DS         AL    +M  +N+         LI+G C +G  S A   + + L +GF
Sbjct: 443 FDS---------ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGF 493

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           L D  T N LL+ LC+ GKL+E       +   G   D++SY T+I G C +  + +A  
Sbjct: 494 LVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFM 553

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
           F+  M++K + P+ + ++++I G      +  A          G+  +V+T++ +I    
Sbjct: 554 FMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCC 613

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +     +   L  EM+ + + P+   YN LIGA C  G + +AL+L ++M  +GI+P+  
Sbjct: 614 KAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSA 673

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDI 563
           TYT LIKG      ++EA+ +  +++  GL  +   +  L   Y ++ +  K     R++
Sbjct: 674 TYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 733

Query: 564 HQKWLLRNK 572
           H K +  NK
Sbjct: 734 HSKNVHPNK 742



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 188/410 (45%), Gaps = 3/410 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           ++ KG  PDV      +N  CK G +E+A  +  +M E    PN  TYN  I G      
Sbjct: 243 VVCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGR 302

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            D+A      M   G+ P  +T++ILV  L K   +GDA   L E+    +     +VI 
Sbjct: 303 YDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEM---TEKGFPPNVIV 359

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              L+DS  + G   +A+ + + M  K +      YN LI G+C +G    A     +ML
Sbjct: 360 YNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEML 419

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             GF  +  ++ +++  LC     D A  F G +    ++P      T+I GLC HG   
Sbjct: 420 SIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 479

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           KA E  L  L K  + +    N ++ G    G L   F I+  +L  G   +  ++N LI
Sbjct: 480 KAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLI 539

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                   + +AF    EM+  G+ PD +TY++LI    N+  +  A+Q + +  R G+ 
Sbjct: 540 SGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMI 599

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           PD+ TY+ +I G C     +E +++F ++ +  L  + + +  L   Y R
Sbjct: 600 PDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCR 649



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 187/407 (45%), Gaps = 10/407 (2%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEK---ADHVIREMSEMRPSPNCATYNAFITGYCR 200
           +  KG  P   T N L+  L +  + +K   A HV+ +      SP+   +   I  +C+
Sbjct: 209 LANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCK----GVSPDVYLFTTAINAFCK 264

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
             ++++A+ LFS M   G+ PN VT+N ++  L   G   +A  F  E + +   + T  
Sbjct: 265 GGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMF-KEKMVERGVEPT-- 321

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           +IT +IL+    K      A  +  +M +K    +++ YN LI+     G ++ A     
Sbjct: 322 LITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKD 381

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            M+ +G      TYNTL+   CK G+ D A      +   G   +Q S+ ++I  LC H 
Sbjct: 382 LMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHH 441

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
               A  F+  ML +++ P   +   +I G  + G  S A  +    L+ G   +  T N
Sbjct: 442 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSN 501

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           AL+      G + + F ++KE+L  G   D  +YN LI   C    +  A    DEM+++
Sbjct: 502 ALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKK 561

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           G+ PD  TY+ LI+G      ++EA + +   +  G+  D   + ++
Sbjct: 562 GLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVM 608



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 147/334 (44%), Gaps = 39/334 (11%)

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           AL +F  +AN G+ P++ T NIL                                +TS +
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNIL--------------------------------LTSLV 229

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
               + K  + F  +        K +  D+  +   IN FC  G +  A   F +M + G
Sbjct: 230 RATEFQKCCEAFHVVC-------KGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAG 282

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            +P+V+TYNT+++ L   G+ DEA  F   + + GV P  I+Y  +++GL     I  A 
Sbjct: 283 VVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAY 342

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             L  M EK   P   ++N +ID     G L+ A  I+DLM+S G+S    T+N LI   
Sbjct: 343 CVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 402

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G    A  L KEML  G   +  ++  +I   C+      AL+   EML R ++P  
Sbjct: 403 CKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGG 462

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
              T LI G C  G   +A E++ K    G  +D
Sbjct: 463 GLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVD 496



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 146/310 (47%), Gaps = 3/310 (0%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
            D +   A++  LC  GK+     ++++++ +G V D +++N L++  C    L++A   
Sbjct: 495 VDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMF 554

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           + EM +    P+  TY+  I G   +N++++A+  +     NG+ P+  T+++++   CK
Sbjct: 555 MDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCK 614

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
                +  K   E+++++      + +    L+ +Y ++G    AL L  DM  K I  +
Sbjct: 615 AERTEEGQKLFDEMMSNN---LQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPN 671

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
              Y  LI G  +   +  A     +M   G  P+V  Y  L++   K G++ +      
Sbjct: 672 SATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 731

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +    V P++I+Y  +I G    G++ +A   L  M EK +VP+   +   I GY + G
Sbjct: 732 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQG 791

Query: 416 DLSNAFSIRD 425
            +  AF   D
Sbjct: 792 GVLQAFKGSD 801



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 13/266 (4%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V+  L+ D   +  +IR L    K+  A+       + G +PDV T++ +++  CK    
Sbjct: 559 VKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERT 618

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E+   +  EM      PN   YN  I  YCR   L  AL L   M + GI PN  T+  L
Sbjct: 619 EEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSL 678

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  +     + +A   L E+  +       +V   T L+D Y K G   +   L  +M  
Sbjct: 679 IKGMSIISRVEEAKLLLEEMRMEG---LEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 735

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           KN+  + + Y V+I G+  +G+++ A     +M ++G +PD ITY   +    KQG + +
Sbjct: 736 KNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQ 795

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQG 375
           A  F G         D+ +Y  II+G
Sbjct: 796 A--FKG--------SDEENYAAIIEG 811


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 193/393 (49%), Gaps = 3/393 (0%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T + L+N L K G L +A  + +E +    + +  TY   +    +  ++ +A+ L   +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
             NG  P   T+N L++ LCK G L +A+  L +++   D   T DV+T T L+D   K 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV---DNGCTPDVVTYTSLIDGLGKK 117

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
              F+A  L+ +M  + +  D V Y  LI G    G I  A + +  M  +G +PDV+T 
Sbjct: 118 KRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTL 177

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           +T+++ LCK G++  A   +  +   G+AP+++ Y  +I GLC    +  A E L  M +
Sbjct: 178 STMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 237

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
               P+   +N++IDG  + GD++ A +  D ML  G   +V+T+N LI    + G+   
Sbjct: 238 AFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDA 297

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  +  +M      P+V TY  LI   C    +  A   Y  M  RG  PD   Y+ L+ 
Sbjct: 298 ACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVD 357

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           G C  G ++    +F +++  G+A      R++
Sbjct: 358 GLCKSGKLEGGCMLFDEMERSGVANSQTRTRLI 390



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 199/414 (48%), Gaps = 4/414 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  L   G +  A  L ++    G   D+ T+  +V+ L K   +++A  ++ +++   
Sbjct: 5   LINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG 64

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P  ATYNA + G C++  L++A+ L   + +NG  P+ VT+  L+  L KK    +A 
Sbjct: 65  CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAY 124

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K   E+ +   G A  D +  T L+    + G   QA +++  M  +    D+V  + +I
Sbjct: 125 KLFKEMAS--RGLAL-DTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G I +A   F  M  RG  P+ + Y+ L++ LCK  K+D A      + K    
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 241

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD I+Y  +I GLC  GD+  AR F   MLE    P+ + +N++I G+ + G+   A  +
Sbjct: 242 PDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 301

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M S   S NV T+  LI    +   +  A    + M   G  PD F Y+ L+   C 
Sbjct: 302 FDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCK 361

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            G +     L+DEM R G+  +  T T LI   C    + EA  +F  I+  G+
Sbjct: 362 SGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 414



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 192/375 (51%), Gaps = 5/375 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  LC  G++  A+ L RK++  G  PDV+T+  L++ L K     +A  + +EM+  
Sbjct: 74  ALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASR 133

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             + +   Y A I G  +  ++ +A  ++ TM + G  P+ VT + ++  LCK G +G A
Sbjct: 134 GLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAA 193

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V+    + A   G A ++V+ S  L+    K      AL +   M +     D + YN+L
Sbjct: 194 VRIFKSMEA--RGLAPNEVVYSA-LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 250

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C +GD+++A A+F +ML+ G  PDV TYN L++  CK G  D A   +  +S +  
Sbjct: 251 IDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC 310

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           +P+ ++Y T+I GLC    + KA  +   M E+   P+  +++ ++DG  + G L     
Sbjct: 311 SPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCM 370

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M   GV +N  T   LI    +   + +A SL   +  +G+ P  + YN +I A  
Sbjct: 371 LFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALI 428

Query: 483 NLGHIHLALQLYDEM 497
             G ++    +Y EM
Sbjct: 429 KSGKVNEGQAVYQEM 443



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 157/314 (50%), Gaps = 5/314 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   + A+IR L   GKI  A  + + M  +G VPDV+T + +++ LCK G +  A 
Sbjct: 135 LALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAV 194

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + + M     +PN   Y+A I G C+  ++D AL + + M      P+ +T+NIL+  L
Sbjct: 195 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 254

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G +  A  F  E+L   +     DV T  IL+  + K G+   A  +++DM      
Sbjct: 255 CKSGDVAAARAFFDEML---EAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCS 311

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++V Y  LI+G C    ++ A  Y+  M +RG  PD   Y++L++ LCK GKL+     
Sbjct: 312 PNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCML 371

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  + ++GVA  Q   + I   LC    + +A   L + + K  +P P+ +N II    +
Sbjct: 372 FDEMERSGVANSQTRTRLIFH-LCKANRVDEAVS-LFNAIRKEGMPHPYAYNSIISALIK 429

Query: 414 CGDLSNAFSIRDLM 427
            G ++   ++   M
Sbjct: 430 SGKVNEGQAVYQEM 443



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 132/298 (44%)

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T +IL++   K G   QA +L  +        DI  Y  +++    N  I  A A   ++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
              G  P + TYN LLN LCK G+L+EA      +   G  PD ++Y ++I GL      
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A +    M  + +  +   +  +I G  + G +  A S+   M S G   +V T + +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    + G I  A  + K M   G+ P+   Y+ LI   C    +  AL++  +M +   
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           TPD ITY  LI G C  G++  A   F ++   G   D   + IL   + +   +D A
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 298



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 61/134 (45%)

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           TF+ LI    + G +  A SL +E   +G   D+ TY  ++        I  A+ L +++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
              G TP I TY  L+ G C  G ++EA ++  KI   G   D + +  L     + K S
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 558 DKARDIHQKWLLRN 571
            +A  + ++   R 
Sbjct: 121 FEAYKLFKEMASRG 134


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 196/385 (50%), Gaps = 7/385 (1%)

Query: 132 GKIGTALWLRRKM-IQKG--TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           G +  AL L RKM +  G    PD +T+N  VN  CKIG+L  A+   +EM      PN 
Sbjct: 212 GAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNV 271

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TY   + GY RV  L+ A  L   +   G+ PN V +N ++H L  +G +  A   L +
Sbjct: 272 RTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSD 331

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           ++   D +   D  T +I+++   +NG   +A      + + ++  D  ++NV+IN  C 
Sbjct: 332 MI---DKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCR 388

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           + +++ A      M  RG +PDV+T+ TL++  CK GK++ A   Y  + KTG  P+ + 
Sbjct: 389 SNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLI 448

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y ++I G    G    A   L+  L +  + +   +N +I GY  CG +  AF++   M 
Sbjct: 449 YNSVINGFAKEGSFDPAI-LLIDTLRRMGLFDVVTYNTLIHGYCNCGKIDQAFALFSEMR 507

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           + G+ ++  T+N LI +  + G +  A  L K M+L G+ PD  TY +LI +        
Sbjct: 508 NSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPE 567

Query: 489 LALQLYDEMLRRGITPDIITYTELI 513
             ++L+D M+ +G+ PD  TY  ++
Sbjct: 568 EVIELHDYMVLKGVVPDRQTYQTMV 592



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 214/437 (48%), Gaps = 8/437 (1%)

Query: 138 LW-LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            W + ++M+  G + +V T N ++  L K G L +A  VI    +    PN  T+N  I 
Sbjct: 147 FWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIID 206

Query: 197 GYCRVNELDKALHL---FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
           G  ++  +D AL L      M+   ++P+ VT+N  V+  CK G L  A +F  E+L  +
Sbjct: 207 GAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKE 266

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
                 +V T   L+D Y + G    A  L +++ +K +  + V YN +I+   + GD+ 
Sbjct: 267 ---IEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDME 323

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A      M+ +   PD  TY+ ++  LC+ G L+EA  F  ++ +  +  D  S+  +I
Sbjct: 324 GASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVI 383

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
             LC   ++  A++ L +M  + +VP+   +  +ID + + G + NA  + + M+  G  
Sbjct: 384 NYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEK 443

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            N+  +N++I    + GS   A  L   +   G+F DV TYN LI   CN G I  A  L
Sbjct: 444 PNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFAL 502

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           + EM   GI    +TY  LI   C  G++ +A+E+   +   GL  D++ + IL   + +
Sbjct: 503 FSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSK 562

Query: 554 MKESDKARDIHQKWLLR 570
               ++  ++H   +L+
Sbjct: 563 KCSPEEVIELHDYMVLK 579



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 207/427 (48%), Gaps = 7/427 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  L   G++  A+ +  + ++ G  P+V+T N +++   K+G ++ A  ++R+M  M 
Sbjct: 169 IIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMS 228

Query: 184 P---SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  TYN+F+ G+C++  L  A      M    I PN  T+  LV    + G L 
Sbjct: 229 GCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLE 288

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +   E++  + G   + VI ++I+       GD   A  L +DM  K I  D   Y+
Sbjct: 289 NAFRLCDELV--EKGLLPNSVIYNSII-HWLSMEGDMEGASLLLSDMIDKRIYPDQFTYS 345

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           ++I G C NG ++ AF +   +L+   + D  ++N ++N LC+   L  A      +   
Sbjct: 346 IVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVR 405

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ PD +++ T+I   C  G +  A +    M++    P   I+N +I+G+ + G    A
Sbjct: 406 GLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPA 465

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + D +   G+  +V T+N LI      G I  AF+L  EM   GI     TYN LI +
Sbjct: 466 ILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINS 524

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  GH+  A +L   M+ RG+ PD +TYT LI     + + +E  E+   +   G+  D
Sbjct: 525 LCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPD 584

Query: 541 HIPFRIL 547
              ++ +
Sbjct: 585 RQTYQTM 591



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 191/390 (48%), Gaps = 10/390 (2%)

Query: 89  ALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKG 148
           A+DL LK  + +++ M       C+++ D   + + +   C  G +  A   +++M+ K 
Sbjct: 213 AMDLALKL-VRKMEVMSG-----CSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKE 266

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
             P+V T+  LV+   ++G LE A  +  E+ E    PN   YN+ I       +++ A 
Sbjct: 267 IEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGAS 326

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
            L S M +  I P++ T++I++  LC+ G L +A KFL  +L   +     D  +  +++
Sbjct: 327 LLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMIL---EMSLVRDAFSHNVVI 383

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           +   ++ +   A  L  +M+ + +  D+V +  LI+  C +G + +A   + +M+K G  
Sbjct: 384 NYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEK 443

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+++ YN+++N   K+G  D A      L + G+  D ++Y T+I G C  G I +A   
Sbjct: 444 PNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFAL 502

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              M    ++     +N +I+   + G +  A  +  +M+  G+  +  T+  LI + ++
Sbjct: 503 FSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSK 562

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
             S  +   L   M+L G+ PD  TY  ++
Sbjct: 563 KCSPEEVIELHDYMVLKGVVPDRQTYQTMV 592



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 141/309 (45%), Gaps = 38/309 (12%)

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA-SHFY-- 354
           A+N  ++      D++  +  + +M+  G++ +V T+N ++  L K+G+L EA S  Y  
Sbjct: 130 AWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRS 189

Query: 355 -----------------------------------GVLSKTGVAPDQISYKTIIQGLCIH 379
                                               V+S   V PD ++Y + + G C  
Sbjct: 190 LKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKI 249

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G++  A EF   ML K + P    +  ++DGY R G L NAF + D ++  G+  N   +
Sbjct: 250 GNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIY 309

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N++I   +  G +  A  L  +M+   I+PD FTY+++I   C  G+++ A +    +L 
Sbjct: 310 NSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILE 369

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
             +  D  ++  +I   C   N+  A+++ A +   GL  D + F  L  R+ +  + + 
Sbjct: 370 MSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVEN 429

Query: 560 ARDIHQKWL 568
           A  +++K +
Sbjct: 430 AIQVYEKMI 438



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 106/236 (44%), Gaps = 4/236 (1%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           +L  D   H  VI  LC    +  A  L   M  +G VPDV+T   L++  CK G +E A
Sbjct: 371 SLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENA 430

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             V  +M +    PN   YN+ I G+ +    D A+ L  T+   G+  + VT+N L+H 
Sbjct: 431 IQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHG 489

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
            C  G +  A     E+   + G   S V  +T L++S  K G   QA  L   M  + +
Sbjct: 490 YCNCGKIDQAFALFSEM--RNSGILASHVTYNT-LINSLCKAGHVLQAKELMKMMVLRGL 546

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
             D V Y +LI  F               M+ +G +PD  TY T++  L ++  ++
Sbjct: 547 IPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESVE 602



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 5/142 (3%)

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
           H WN  +    +  D++  + +   M+S+G   NV TFN +I A  + G + +A S+   
Sbjct: 129 HAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYR 188

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM-LRRG--ITPDIITYTELIKGHCA 518
            L  GI+P+V T+N++I  +  +G + LAL+L  +M +  G  + PD +TY   + G C 
Sbjct: 189 SLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCK 248

Query: 519 RGNMKEAEEVFAKIQTLGLAID 540
            GN+  AEE   K + LG  I+
Sbjct: 249 IGNLAVAEEF--KKEMLGKEIE 268



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 107/241 (44%), Gaps = 3/241 (1%)

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G    A+    ++   GF   V  +N  L+ L K   ++     Y  +   G   +  ++
Sbjct: 107 GATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTF 166

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI---RDL 426
             II  L   G +V+A   +   L+  + P    +N+IIDG  + G +  A  +    ++
Sbjct: 167 NLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEV 226

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M    V  +  T+N+ +    + G++  A   KKEML   I P+V TY  L+     +G 
Sbjct: 227 MSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGS 286

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A +L DE++ +G+ P+ + Y  +I      G+M+ A  + + +    +  D   + I
Sbjct: 287 LENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSI 346

Query: 547 L 547
           +
Sbjct: 347 V 347



 Score = 39.7 bits (91), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 28/129 (21%), Positives = 58/129 (44%)

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            F+AL+   T+ G+   A+ +  ++ LDG +  V  +N  +     L  ++   ++Y EM
Sbjct: 95  VFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEM 154

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
           +  G   ++ T+  +I      G + EA  V  +    G+  + + F ++     +M   
Sbjct: 155 VSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAM 214

Query: 558 DKARDIHQK 566
           D A  + +K
Sbjct: 215 DLALKLVRK 223


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 212/470 (45%), Gaps = 42/470 (8%)

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           R LC  G+   AL L R M + G VPD + +  +++ LC  G + +A  ++ EM  M  +
Sbjct: 183 RALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCA 242

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
            +  T++  + G C +  + +A  L   M   G  P  +T+  L+  LC+     +A   
Sbjct: 243 ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAM 302

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           LG V          +V+    ++      G   +A  L+  M  K  Q D   Y++L++G
Sbjct: 303 LGRV-------PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHG 355

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITY------------------------------- 334
            C  G I SA     +M K+GF P+V+TY                               
Sbjct: 356 LCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLN 415

Query: 335 ----NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
               N ++  LCK G++DEA      +   G  PD  SY TII  LC +  + +A     
Sbjct: 416 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE 475

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
           ++LE+ VV     +N II    R G   +A  +   M+  G S +V ++N LI A  + G
Sbjct: 476 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG 535

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           ++  +  L +EM   GI P+  +YN+LI   C    +  AL+L  +ML +G+ PDI+TY 
Sbjct: 536 NVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 595

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            LI G C  G M  A  +  K+    +  D I + IL   + +++  D A
Sbjct: 596 TLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 645



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 189/417 (45%), Gaps = 9/417 (2%)

Query: 135 GTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM-RPSPNCATYN 192
           G AL L  ++ ++ G  P   ++N +++ L +      A  + R M    R  P   T+ 
Sbjct: 120 GRALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFG 179

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
                 CR+   D+AL L   MA +G  P+ V +  ++HALC +G + +A   L E+L  
Sbjct: 180 VAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLM 239

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                 +DV T   ++      G   +A  L + M  K     ++ Y  L+ G C     
Sbjct: 240 G---CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A A    ML R    +V+ +NT++     +GKL EA+  Y  +   G  PD  +Y  +
Sbjct: 297 DEARA----MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 352

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           + GLC  G I  A   L  M +K   P    + +++  + + G   +  ++ + M + G+
Sbjct: 353 MHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 412

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           + N   +N +I A  + G + +A  L +EM   G  PD+ +YN +I   CN   +  A  
Sbjct: 413 TLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 472

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           +++ +L  G+  + ITY  +I      G  ++A  +  ++   G ++D + +  L K
Sbjct: 473 MFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIK 529



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 148/298 (49%), Gaps = 38/298 (12%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT------------------- 155
           + D   +  ++  LC  G+IG+A+ L R+M +KG  P+V+T                   
Sbjct: 343 QPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 402

Query: 156 ----------------HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
                           +N ++  LCK G +++A  +I+EM     +P+  +YN  I   C
Sbjct: 403 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 462

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
              ++++A H+F  +   G+  N +T+N ++HAL + G   DAV+   E++       + 
Sbjct: 463 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG---CSL 519

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DV++   L+ +  K+G+  ++L L  +M +K I+ + V+YN+LI+  C    +  A    
Sbjct: 520 DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELS 579

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            QML +G  PD++TYNTL+N LCK G +  A +    L    V PD I+Y  +I   C
Sbjct: 580 KQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHC 637



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 9/173 (5%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           C+L  D   +  +I+ +C  G +  +L L  +M +KG  P+ +++N L++ELCK   +  
Sbjct: 517 CSL--DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRD 574

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A  + ++M     +P+  TYN  I G C++  +  AL+L   + N  + P+ +T+NIL+ 
Sbjct: 575 ALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK-----NGDKFQ 279
             CK  LL DA   L   +A        D     IL D  FK      GD FQ
Sbjct: 635 WHCKVRLLDDAAMLLNRAMAAV--CPVGDRRIMQILPDKNFKLYLHTKGDDFQ 685



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 1/168 (0%)

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
           V P    +NV++    R    ++A ++ R ++    V    FTF     A  R G   +A
Sbjct: 135 VQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEA 194

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            +L + M   G  PD   Y  +I A C+ G +  A  L +EML  G   D+ T+ ++++G
Sbjct: 195 LALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRG 254

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            C  G ++EA  +  ++ T G     + +  L +   R++++D+AR +
Sbjct: 255 MCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAM 302


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 197/406 (48%), Gaps = 6/406 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M + G  P+ +T N LVN   K G     + ++  M+     PN  +YN  + G C++  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 204 LDKALHLFSTMANNGIR--PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
             +A  L   M + G R  P+ VT++ L+   CK G + ++ + L EV++        D 
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRG---LRPDA 117

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +  T +M S  K+    +AL L  +M +      ++ +N LI+G C   ++  A +    
Sbjct: 118 LMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQT 177

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M   G   DV+TYNTL++ LCK G+L EA      +  +G APD ++Y + + GLC  G 
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF-GVSSNVFTFN 440
           ++ A + L  M +    P    +N I+DG  + G +  A  + + M S  G   NV  ++
Sbjct: 238 VLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            ++    + G   +A S+ + M   G  PDV TY+ L+   C  G I  A++   EM   
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME 357

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           G  P+ +TY  L+ G C+ G + EAE +  ++ + G   DH P  +
Sbjct: 358 GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSV 403



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 209/424 (49%), Gaps = 11/424 (2%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM--RPSPNCA 189
           G+ G    L   M  +G  P+V+++N L+  LCK+    +A+ ++R+M     R +P+  
Sbjct: 24  GRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLV 83

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           TY+  ++GYC+  +++++  L   + + G+RP+ + +  ++ +LCK   LG+A++ L E+
Sbjct: 84  TYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEM 143

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +          +IT   L+    +  +   A +L   M    ++ D+V YN L++G C  
Sbjct: 144 I---RAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKA 200

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G +  A     +M   G  PDV+ Y++ +  LCK GK+  A      +  +   P+ ++Y
Sbjct: 201 GRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTY 260

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI-WNVIIDGYGRCGDLSNAFSIRDLML 428
            TI+ GLC  G I  A E +  M          + ++ ++DG  + G    A S+ + M 
Sbjct: 261 NTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G   +V T+++L+    + G I +A    +EM ++G  P+  TY  L+   C+ G + 
Sbjct: 321 RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLA 380

Query: 489 LALQLYDEMLRRG-----ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            A ++ +EM   G       P + TY  LI G C  G + +A + F ++++ G   D + 
Sbjct: 381 EAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVS 440

Query: 544 FRIL 547
           +  +
Sbjct: 441 YSTI 444



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 177/368 (48%), Gaps = 9/368 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++   C  GK+  +  L +++I +G  PD L +  ++  LCK   L +A  ++
Sbjct: 81  DLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELL 140

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P   T+N  I+G CR   L+ A  L  TMA +G++ + VT+N L+  LCK 
Sbjct: 141 EEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKA 200

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L +A + L  + A        DV+  +  +    K+G    A  +   M   +   ++
Sbjct: 201 GRLQEAEQLLERMKASG---CAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNV 257

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           V YN +++G C +G I +A     QM    G   +V+ Y+T+++ LCK G+  EA     
Sbjct: 258 VTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVME 317

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +++ G  PD ++Y +++ GLC  G I +A E +  M  +   P    +  ++ G   CG
Sbjct: 318 AMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCG 377

Query: 416 DLSNAFSIRDLMLSFG-----VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            L+ A  + + M S G        +V T+NALI    + G I DA    + M   G  PD
Sbjct: 378 RLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPD 437

Query: 471 VFTYNLLI 478
             +Y+ ++
Sbjct: 438 GVSYSTIV 445



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 167/348 (47%), Gaps = 9/348 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  V+  LC   ++G AL L  +MI+ G  P ++T N L++  C+  +LE AD
Sbjct: 113 LRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMAD 172

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +++ M+      +  TYN  + G C+   L +A  L   M  +G  P+ V ++  V+ L
Sbjct: 173 SLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGL 232

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN-I 292
           CK G + +A + L E + D D     +V+T   ++D   K+G    AL +   M   +  
Sbjct: 233 CKSGKVLNAHQVL-EQMRDSD--HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGC 289

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             ++V Y+ +++G C  G    A +    M + G  PDV+TY++L+N LCK GK++EA  
Sbjct: 290 GLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVE 349

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV-----PEPHIWNVI 407
               ++  G  P+ ++Y +++ GLC  G + +A   +  M           P    +N +
Sbjct: 350 AVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNAL 409

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
           I G  + G + +A      M S G   +  +++ ++    R G    A
Sbjct: 410 IGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 145/307 (47%), Gaps = 3/307 (0%)

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T   L++ + K G       L   M  + IQ ++V+YN L+ G C       A      
Sbjct: 11  VTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRD 70

Query: 322 MLKRG--FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
           M+ RG    PD++TY+TLL+  CK GK++E+      +   G+ PD + Y  ++  LC  
Sbjct: 71  MISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKS 130

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
             + +A E L  M+     P    +N +I G  R  +L  A S+   M + GV ++V T+
Sbjct: 131 ARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTY 190

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N L+    + G + +A  L + M   G  PDV  Y+  +   C  G +  A Q+ ++M  
Sbjct: 191 NTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRD 250

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL-GLAIDHIPFRILKKRYRRMKESD 558
               P+++TY  ++ G C  G +  A E+  ++ +  G  ++ + +  +     ++  + 
Sbjct: 251 SDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQ 310

Query: 559 KARDIHQ 565
           +AR + +
Sbjct: 311 EARSVME 317


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 222/445 (49%), Gaps = 3/445 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC  G++  A  L  +M + G +PDV+T N L++   K G+L++ + ++ EM    
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TYNA I  +C+   ++ A   F+ M   G+  N VT +  V A CK+GL+ +A+
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K   ++     G A ++  T T L+D   K G    A+ L ++M ++ +  ++V Y VL+
Sbjct: 314 KLFAQMRVR--GMALNE-FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C    ++ A      M K G   + + Y TL++        ++A      +   G+ 
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLE 430

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D   Y  +IQGLC    + +A+  L  M E  + P   I+  ++D   + G +  A ++
Sbjct: 431 LDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAM 490

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              +L  G   NV T+ ALI    + GSI +A S   +M   G+ P+V  Y  L+   C 
Sbjct: 491 LQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCK 550

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G ++ A+QL++EM+ +G++ D + YT L+ G+  +GN+ +A  + AK+   GL +D   
Sbjct: 551 NGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFC 610

Query: 544 FRILKKRYRRMKESDKARDIHQKWL 568
           +      +  +    +AR++  + +
Sbjct: 611 YTCFISGFCNLNMMPEAREVFSEMI 635



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 206/415 (49%), Gaps = 3/415 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R   + D   + A+I   C  G++ TA      M ++G + +V+T +  V+  CK G + 
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  +  +M     + N  TY   I G C+   LD A+ L   M   G+  N VT+ +LV
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LCK+  + +A   L   + +  G   ++++ +T L+  +F N +  +AL L ++M  K
Sbjct: 371 DGLCKERKVAEAEDVLR--MMEKAGVRANELLYTT-LIHGHFMNKNSEKALGLLSEMKNK 427

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            ++ DI  Y  LI G C    +  A +   +M + G  P+ I Y T+++   K GK+ EA
Sbjct: 428 GLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEA 487

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                 +  +G  P+ I+Y  +I GLC  G I +A      M +  + P    +  ++DG
Sbjct: 488 IAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDG 547

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             + G L+ A  + + M+  G+S +   + AL+    + G++ DAF+LK +M+  G+  D
Sbjct: 548 LCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 607

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           +F Y   I   CNL  +  A +++ EM+  GI PD   Y  LI  +   GN++EA
Sbjct: 608 LFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEA 662



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 127/500 (25%), Positives = 224/500 (44%), Gaps = 51/500 (10%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
           GP R  L +     ++V+ D    G +  A+    ++ +    P+  T N+++  L +  
Sbjct: 115 GPRRSALASVVDTLLSVLAD---RGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR-- 169

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
             +++  ++R + E  P+PN  T+N  I   C+  EL +A  LFS M   G  P+ VT N
Sbjct: 170 --DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFN 227

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            L+    K G L D V+ L E +     KA  DV+T   L++ + K G    A   +  M
Sbjct: 228 SLIDGYGKCGEL-DEVEQLVEEMRRSGCKA--DVVTYNALINCFCKFGRMETAYGYFAAM 284

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            ++ +  ++V ++  ++ FC  G +  A   F QM  RG   +  TY  L++  CK G+L
Sbjct: 285 KREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRL 344

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLC------------------------------ 377
           D+A      + + GV  + ++Y  ++ GLC                              
Sbjct: 345 DDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTL 404

Query: 378 IHGDIV-----KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           IHG  +     KA   L  M  K +  +  ++  +I G      L  A S+   M   G+
Sbjct: 405 IHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGL 464

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             N   +  ++ A  + G + +A ++ +++L  G  P+V TY  LI   C  G I  A+ 
Sbjct: 465 EPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAIS 524

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
            +++M   G+ P++  YT L+ G C  G + EA ++F ++   G+++D + +  L   Y 
Sbjct: 525 HFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYL 584

Query: 553 RMKESDKARDIHQKWLLRNK 572
                 K  ++H  + L+ K
Sbjct: 585 ------KQGNLHDAFALKAK 598



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 5/156 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E +     MRD G     L+ + + + A++  LC  G +  A+ L  +M+ KG   D 
Sbjct: 519 IDEAISHFNKMRDLG-----LDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDK 573

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           + +  L++   K G+L  A  +  +M +     +   Y  FI+G+C +N + +A  +FS 
Sbjct: 574 VVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSE 633

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           M  +GI P+R  +N L+    K G L +A+    E+
Sbjct: 634 MIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 223/474 (47%), Gaps = 9/474 (1%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L + L  L TM+  G     L  D   +  ++   C  G +G A  L  +M + G  P  
Sbjct: 224 LADALATLSTMQGFG-----LSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQ 278

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+N LV+   ++G +++A  V+  M+     P+  TYN    G C+  ++D+A  L   
Sbjct: 279 PTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDE 338

Query: 214 MAN-NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
           M   +   P+ VT+N LV A  K     DA++ L E+    D      ++T  I++ S  
Sbjct: 339 MERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEM---RDKGVKPTLVTHNIVVKSLC 395

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G   +AL     + ++ +  D++ YN LI+ +C  G+++ AF    +M+ +G   D  
Sbjct: 396 KEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTF 455

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           T NT+L  LCK  + ++A        + G  PD++SY T++       +   A      M
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +E+ ++P    +N +I G  R   L  A    + ++  G+  +  T+N +I A  + G +
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDL 575

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +AF    +M+ +   PDV T N L+   C  G +  AL+L++  + +G   D+ITY  L
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTL 635

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           I+  C  G++  A   F  ++  GL  D   + ++         S++A ++  K
Sbjct: 636 IQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHK 689



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 201/417 (48%), Gaps = 7/417 (1%)

Query: 127 DLCLGGKIGT-ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           D C   +  + AL L  +M  KG  P ++THN +V  LCK G LE+A   + +++E   +
Sbjct: 357 DACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLA 416

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  TYN  I  YC+   + KA  L   M   G++ +  T N +++ LCK     DA + 
Sbjct: 417 PDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEEL 476

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L    +        D ++   +M +YFK  +   AL LW+ M ++ +   I  YN LI G
Sbjct: 477 LH---SPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKG 533

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C    +  A     +++++G +PD  TYN +++  CK+G L+ A  F+  + +    PD
Sbjct: 534 LCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPD 593

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++  T++ GLC+HG + KA +   S +EK    +   +N +I    + GD+  A    D
Sbjct: 594 VVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFD 653

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   G+  + FT+N ++ A +  G   +A ++  ++   G     F   LL  +S +  
Sbjct: 654 DMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEA 713

Query: 486 HI--HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            +  H   +   E   +     + TY E + G C  G +KEA+ V  ++   G+ +D
Sbjct: 714 DVKEHEG-KPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVD 769



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 205/432 (47%), Gaps = 2/432 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  AL     M   G  PD +T+N L+N  C+ G L +A  ++  M     +P  
Sbjct: 219 CSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQ 278

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN  ++ + R+  + +A  +  +M   G  P+  T+N+L   LC+ G + +A +   E
Sbjct: 279 PTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDE 338

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +  +    A  DV+T   L+D+ FK      AL L  +M  K ++  +V +N+++   C 
Sbjct: 339 M--ERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCK 396

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G +  A     ++ + G  PDVITYNTL++  CK G + +A      +   G+  D  +
Sbjct: 397 EGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFT 456

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
             T++  LC       A E L S  ++  VP+   +  ++  Y +  +   A  + D M+
Sbjct: 457 LNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMI 516

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
              +  ++ T+N LI    R   + +A     E++  G+ PD  TYN++I A C  G + 
Sbjct: 517 ERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLE 576

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A + +++M+     PD++T   L+ G C  G + +A ++F      G  +D I +  L 
Sbjct: 577 NAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLI 636

Query: 549 KRYRRMKESDKA 560
           +   ++ + D A
Sbjct: 637 QSMCKVGDVDTA 648



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 142/285 (49%), Gaps = 1/285 (0%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           +L ++  + +  +  +   +N+L++  C  G ++ A A    M   G  PD +TYNTLLN
Sbjct: 192 SLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLN 251

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C++G L EA      + + G+AP Q +Y T++      G I +A + + SM      P
Sbjct: 252 AHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEP 311

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS-SNVFTFNALILAETRGGSIFDAFSL 458
           +   +NV+  G  + G +  AF ++D M     +  +V T+N L+ A  +     DA  L
Sbjct: 312 DLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRL 371

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            +EM   G+ P + T+N+++ + C  G +  AL   +++   G+ PD+ITY  LI  +C 
Sbjct: 372 LEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCK 431

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            GN+ +A  +  ++   GL +D      +     +MK  + A ++
Sbjct: 432 AGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEEL 476



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 163/383 (42%), Gaps = 47/383 (12%)

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCR-VNELDKA-LHLFSTMANNGIRPNRVTHNILVH 231
           H +R    +RPS   A  NA ++   R  + L +A L +F ++    + PN  T N+LVH
Sbjct: 159 HSLRRRRGVRPSLQAA--NAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVH 216

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
             C KG L DA                                      LA  + M    
Sbjct: 217 THCSKGTLADA--------------------------------------LATLSTMQGFG 238

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           +  D V YN L+N  C  G +  A A   +M + G  P   TYNTL++   + G + +A+
Sbjct: 239 LSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQAT 298

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS-VVPEPHIWNVIIDG 410
                ++  G  PD  +Y  +  GLC  G + +A      M   S  +P+   +N ++D 
Sbjct: 299 KVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDA 358

Query: 411 --YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
               RC   S+A  + + M   GV   + T N ++ +  + G + +A    +++  +G+ 
Sbjct: 359 CFKWRCS--SDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLA 416

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PDV TYN LI A C  G++  A  L DEM+ +G+  D  T   ++   C     ++AEE+
Sbjct: 417 PDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEEL 476

Query: 529 FAKIQTLGLAIDHIPFRILKKRY 551
                  G   D + +  +   Y
Sbjct: 477 LHSPPQRGFVPDEVSYGTVMAAY 499



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 114/253 (45%), Gaps = 7/253 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           LKE +D+L  + + G     L  D   +  +I   C  G +  A     KM++    PDV
Sbjct: 540 LKEAIDKLNELVEKG-----LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDV 594

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T N L+N LC  G L+KA  +     E     +  TYN  I   C+V ++D ALH F  
Sbjct: 595 VTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDD 654

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G++P+  T+N+++ AL + G   +A   L ++   D GK +       +   S  +
Sbjct: 655 MEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLA--DSGKLSQSFACPLLKPSSADE 712

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
              K        +  +K     +  Y   +NG C  G +  A A   +M+++G   D  T
Sbjct: 713 ADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSST 772

Query: 334 YNTLLNCLCKQGK 346
           Y TL+  L K+ K
Sbjct: 773 YITLMEGLIKRQK 785


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/533 (26%), Positives = 233/533 (43%), Gaps = 65/533 (12%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRH---------VAVIRDLCLGGKIGTALWLRRKMIQKG 148
           L++ +     G V   L   Y RH         +A ++DL     + T   L   M    
Sbjct: 160 LEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTD 219

Query: 149 TVPDVL-------------THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
            + DV              T + L++ LC+   LE A   + + +++   P+  + N  +
Sbjct: 220 IMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIM 278

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
           + +C+V  +D A   F  M  NG+  +  ++NIL+H LC  G + +A+ F      DD  
Sbjct: 279 SKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF-----TDDME 333

Query: 256 K--ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
           K     DV+T   L   +   G    A  +   M  + +  D+V Y  LI G C  G+I 
Sbjct: 334 KHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIE 393

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A     + L RGF  +VI YN LL+CLCK G+++EA   +  +    + PD I Y  +I
Sbjct: 394 EALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILI 453

Query: 374 QGLCIHGDIVKA-------------------REFLLSMLEKSVVPEPH------------ 402
            GLC  G + +A                   R  LL + +   + E              
Sbjct: 454 HGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLM 513

Query: 403 ----IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
               ++N++IDGY R   ++ A  +   M+  G++ +V TFN LI    R G + +A  +
Sbjct: 514 EDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKM 573

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            + + L G+ P V TY  L+ A C +G++        EM    + P  +TYT LIKG C 
Sbjct: 574 LEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCR 633

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           +  M E+ ++   +   GL  D + +  + + + + KE  KA  ++   LL N
Sbjct: 634 QNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHN 686



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 213/427 (49%), Gaps = 3/427 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  + +   L G +  A  + +KM+ +G  PD++T+  L+   C++G++E+A 
Sbjct: 337 VEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEAL 396

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + +E        N   YN  ++  C+V  +++AL LF  M    + P+ + ++IL+H L
Sbjct: 397 KLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGL 456

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G +  A +   ++      K         +L+   FKNG+  +A   ++   + ++ 
Sbjct: 457 CKEGFVQRAYQLYEQMRLKR--KFPHHFAQRAVLL-GLFKNGNISEARNYFDTWTRMDLM 513

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+V YN++I+G+     I+ A   + +M++RG  P V+T+NTL+N  C++G L EA   
Sbjct: 514 EDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKM 573

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             V+   G+ P  ++Y T++   C  G++ +   FL  M   +VVP    + V+I G  R
Sbjct: 574 LEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCR 633

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              +  +  + + M + G+  +  T+N +I    +G  I  A  L   MLL    P   T
Sbjct: 634 QNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVT 693

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y +LI A C  G +    ++   +  R IT   +TY  +IK HCA+G + +A   F ++ 
Sbjct: 694 YKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQML 753

Query: 534 TLGLAID 540
             G  I 
Sbjct: 754 AKGFVIS 760



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 201/427 (47%), Gaps = 3/427 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I   C  G I  AL LR++ + +G   +V+ +N L++ LCK+G +E+A 
Sbjct: 372 LNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEAL 431

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM  +R  P+   Y+  I G C+   + +A  L+  M      P+      ++  L
Sbjct: 432 TLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGL 491

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K G + +A  +       D      DV+   I++D Y +     +A+ L+  M ++ I 
Sbjct: 492 FKNGNISEARNYFDTWTRMD---LMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGIT 548

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             +V +N LINGFC  GD+  A      +  +G +P V+TY TL+N  C+ G + E  HF
Sbjct: 549 PSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHF 608

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +    V P  ++Y  +I+GLC    + ++ + L  M  K ++P+   +N II  + +
Sbjct: 609 LHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCK 668

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             +++ A  + ++ML         T+  LI A    G + D   +   +    I     T
Sbjct: 669 GKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVT 728

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  +I A C  G +  AL  +++ML +G    I  Y+ +I   C RG + EA+  F  + 
Sbjct: 729 YMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMML 788

Query: 534 TLGLAID 540
           + G+  D
Sbjct: 789 SEGVTPD 795



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 204/437 (46%), Gaps = 3/437 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC+ G +  AL     M + G  PDV+T+N L      +G +  A  V+++M    
Sbjct: 312 LLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQG 371

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  TY   I G+C++  +++AL L     + G + N + +N+L+  LCK G + +A+
Sbjct: 372 LNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEAL 431

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+   +  +   D I  +IL+    K G   +A  L+  M  K       A   ++
Sbjct: 432 TLFDEM---ETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVL 488

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G   NG+IS A  YF    +   + DV+ YN +++   +   + EA   Y  + + G+ 
Sbjct: 489 LGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGIT 548

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P  +++ T+I G C  GD+++AR+ L  +  K +VP    +  +++ Y   G++   F  
Sbjct: 549 PSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHF 608

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M +  V     T+  LI    R   + ++  L + M   G+ PD  TYN +I   C 
Sbjct: 609 LHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCK 668

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              I  ALQLY+ ML     P  +TY  LI   C  G++K+ + +   I+   + +  + 
Sbjct: 669 GKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVT 728

Query: 544 FRILKKRYRRMKESDKA 560
           +  + K +    +  KA
Sbjct: 729 YMTIIKAHCAKGQVSKA 745



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 177/373 (47%), Gaps = 11/373 (2%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
            D ++T+R        LE D+  +  +I  LC  G +  A  L  +M  K   P      
Sbjct: 434 FDEMETLR--------LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQR 485

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            ++  L K G++ +A +     + M    +   YN  I GY R++ + +A+ L+  M   
Sbjct: 486 AVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIER 545

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           GI P+ VT N L++  C++G L +A K L EV+          V+T T LM++Y + G+ 
Sbjct: 546 GITPSVVTFNTLINGFCRRGDLMEARKML-EVIRLKG--LVPSVVTYTTLMNAYCEVGNM 602

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +     ++M    +    V Y VLI G C    +  +      M  +G LPD +TYNT+
Sbjct: 603 QEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTI 662

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           + C CK  ++ +A   Y ++      P Q++YK +I  LCI GD+      ++S+ ++++
Sbjct: 663 IQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNI 722

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
             +   +  II  +   G +S A    + ML+ G   ++  ++A+I    + G I +A  
Sbjct: 723 TLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKY 782

Query: 458 LKKEMLLDGIFPD 470
               ML +G+ PD
Sbjct: 783 FFVMMLSEGVTPD 795



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 206/455 (45%), Gaps = 54/455 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQK-------GTVPDVLTHNYLVNELCKIGDLEKADHV 175
           +VI++L +   +G+A  +   +++K       G V D+L   Y  +E+     +  A  V
Sbjct: 138 SVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEM-----IHDALFV 192

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           I +M ++    +  TYN+ +     +   D    +++ +  +G   +  T +IL+H LC+
Sbjct: 193 IAKMKDLNFQASVPTYNSLLHN---MRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCE 249

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
           +  L DA+ FL                      DS                   K +   
Sbjct: 250 QSKLEDAISFLH---------------------DS------------------NKVVGPS 270

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           IV+ N +++ FC  G I  A ++FC M+K G L D  +YN LL+ LC  G +DEA  F  
Sbjct: 271 IVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTD 330

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + K GV PD ++Y T+ +G  + G +  AR+ +  ML + + P+   +  +I G+ + G
Sbjct: 331 DMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMG 390

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
           ++  A  +R   LS G   NV  +N L+    + G I +A +L  EM    + PD   Y+
Sbjct: 391 NIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYS 450

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           +LI   C  G +  A QLY++M  +   P       ++ G    GN+ EA   F     +
Sbjct: 451 ILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRM 510

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            L  D + + I+   Y R+    +A  ++ K + R
Sbjct: 511 DLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIER 545



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 143/302 (47%), Gaps = 3/302 (0%)

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           I  A+ L  KMI++G  P V+T N L+N  C+ GDL +A  ++  +      P+  TY  
Sbjct: 532 IAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTT 591

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            +  YC V  + +  H    M  N + P  VT+ +L+  LC++  + ++++ L  + A  
Sbjct: 592 LMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKG 651

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
                 D +T   ++  + K  +  +AL L+N M   N     V Y VLIN  C+ GD+ 
Sbjct: 652 ---LLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLK 708

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
                   +  R      +TY T++   C +G++ +A  ++  +   G       Y  +I
Sbjct: 709 DVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVI 768

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
             LC  G I +A+ F + ML + V P+P I   +++ + + G+ S+ F    +++  G  
Sbjct: 769 NRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGFI 828

Query: 434 SN 435
           S+
Sbjct: 829 SH 830


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 192/390 (49%), Gaps = 3/390 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC  G++  A  L  +M  KG  P+V+T+N LVN   KI D E  + ++R M   +
Sbjct: 221 VIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDK 280

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N ATY   I  Y    ++ +A  +F  M   G+  +      ++   CK G +  A 
Sbjct: 281 VVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAF 340

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+   ++    ++  T   L+     +G    A  L N+M  + +  ++V +N LI
Sbjct: 341 ALFDEL---NERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLI 397

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG+C  G I  A      M K+GF  D+ TYNT+   LCK  + +EA  +   + + GV 
Sbjct: 398 NGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVD 457

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ +S+  +I   C  G++V+A      M +K   P    +N +IDGY + G L  A+ +
Sbjct: 458 PNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRL 517

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
           +D M S G++S+++T+  L+  E   G + +A +L  E+   G+   + TY  +I     
Sbjct: 518 KDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSK 577

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELI 513
            G    A +LYDEM+  G+TPD   YT L+
Sbjct: 578 EGRSEEAFRLYDEMMAAGLTPDDRVYTSLV 607



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 246/512 (48%), Gaps = 28/512 (5%)

Query: 36  IFSNSRTC-SDDDNLPCTLNDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAVFNALDLIL 94
           +  N  TC + D NL C+++D +S + ++                   P+ V    D++ 
Sbjct: 109 VMKNVLTCYAMDKNLRCSVSDFVSLIDNRFHE----------------PKFVEKLCDMLF 152

Query: 95  KENLDRLKTMRDTG------PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKG 148
           +  +D   +M + G       V   L+ D R  +  +  L    ++  +L   +KM++  
Sbjct: 153 RVYVDN--SMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFK 210

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
               V +   +++ LCK G +E+A  ++ EM+     PN  TYN  +  Y ++ + +   
Sbjct: 211 VDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVN 270

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
            +   M  + +  N  T+ +L+      G + +A K   ++L   +    +D+   T ++
Sbjct: 271 EMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKML---ERGVEADIHVFTSII 327

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
               K G+  +A AL++++ ++ +  +   Y  LI+G C +G + +A     +M  +G  
Sbjct: 328 SWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLD 387

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
            +++ +NTL+N  CK+G +DEA     V+ K G   D  +Y TI  GLC      +A+ +
Sbjct: 388 MNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRW 447

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L +M+EK V P    + ++ID + + G+L  A  +   M   G   NV T+N LI   ++
Sbjct: 448 LFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSK 507

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G + +A+ LK EM   G+  D++TY  L+   C  G +  AL L +E+ R+G+   I+T
Sbjct: 508 KGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVT 567

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           YT +I G    G  +EA  ++ ++   GL  D
Sbjct: 568 YTAIISGLSKEGRSEEAFRLYDEMMAAGLTPD 599



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 166/362 (45%), Gaps = 6/362 (1%)

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            ++   +F  M +NG++ +  +  + + AL +   +  ++ F  +++   + K    V +
Sbjct: 161 FEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMV---EFKVDVTVYS 217

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            TI++D   K G   +A  L  +M  K I+ ++V YN L+N +    D          M 
Sbjct: 218 MTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLME 277

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
               + +  TY  L+      GK+ EA   +  + + GV  D   + +II   C  G++ 
Sbjct: 278 MDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMK 337

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A      + E+ +V   H +  +I G    G L  A  + + M S G+  N+  FN LI
Sbjct: 338 RAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLI 397

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G I +A  ++  M   G   D+FTYN + G  C L     A +    M+ +G+ 
Sbjct: 398 NGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVD 457

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR---RMKESDKA 560
           P+ +++T +I  HC  GN+ EAE VF  ++  G   + + +  L   Y    ++KE+ + 
Sbjct: 458 PNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRL 517

Query: 561 RD 562
           +D
Sbjct: 518 KD 519



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 125/255 (49%), Gaps = 5/255 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  G++  A  L  +M  +G   +++  N L+N  CK G +++A  +   M + 
Sbjct: 360 ALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKK 419

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +  TYN    G C++N  ++A     TM   G+ PN V+  I++   CK+G L +A
Sbjct: 420 GFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEA 479

Query: 243 VKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
            +    V  D   K    +V+T   L+D Y K G   +A  L ++M    + +DI  Y  
Sbjct: 480 ER----VFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTT 535

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L++G C+ G +  A     ++ ++G    ++TY  +++ L K+G+ +EA   Y  +   G
Sbjct: 536 LVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAG 595

Query: 362 VAPDQISYKTIIQGL 376
           + PD   Y +++  L
Sbjct: 596 LTPDDRVYTSLVANL 610



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 105/221 (47%), Gaps = 3/221 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G I  AL ++  M +KG   D+ T+N +   LCK+   E+A   +  M E 
Sbjct: 395 TLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEK 454

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  ++   I  +C+   L +A  +F  M   G +PN VT+N L+    KKG L +A
Sbjct: 455 GVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEA 514

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +   E+   +    TSD+ T T L+      G   +AL L N++ +K +   IV Y  +
Sbjct: 515 YRLKDEM---ESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAI 571

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           I+G    G    AF  + +M+  G  PD   Y +L+  L K
Sbjct: 572 ISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANLHK 612



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/154 (19%), Positives = 66/154 (42%)

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
               F + D M+  G+  +  +    +LA  R   +  +    K+M+   +   V++  +
Sbjct: 161 FEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTI 220

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +I   C  G +  A  L  EM  +GI P+++TY  L+  +    + +   E+   ++   
Sbjct: 221 VIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDK 280

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +  +   + +L + Y    +  +A  + +K L R
Sbjct: 281 VVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLER 314


>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13800-like [Brachypodium distachyon]
          Length = 821

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 227/455 (49%), Gaps = 12/455 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   H + I  LC  GKI  A  + +++I++    + +  N +++ LCK   LE+ +
Sbjct: 256 VKPDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVE 315

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++        +P+   Y+  I  YC+V  L K L  +  M ++G+  N    + L+   
Sbjct: 316 KLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCF 375

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K G+     ++  +     D     D +   I MD+Y K G+  +A+ L  +M    + 
Sbjct: 376 TKLGMASQVTEYFQKF---RDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLS 432

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D + Y  LI G+CL GDI +A   F +MLK    PDV+TYN L + L K+G + E    
Sbjct: 433 PDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDL 492

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI-WNVIIDGYG 412
            G +   G+ P+ ++Y  +I G C  GD +   E L +++E+  +    + ++ ++ GY 
Sbjct: 493 IGHMEDRGLQPNSLTYGVVIDGFC-RGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYL 551

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
             G   NA+ +   +   G   + F+ + LI    R G+   A ++   ML     PD+ 
Sbjct: 552 HKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLI 611

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           +Y+ LI A C  G +  A   + +M++RG+  D+I YT L+ G+C  G M+EA E+FA++
Sbjct: 612 SYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQM 671

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
            +LG+  D I + +L   +  +KE     D+ ++W
Sbjct: 672 TSLGIKPDIIAYTVLLDGH--LKE-----DLQRRW 699



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 216/431 (50%), Gaps = 19/431 (4%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           +K    G   D + +N  ++  CK+G++++A  ++ EM  +  SP+   Y   I GYC  
Sbjct: 389 QKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLK 448

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            ++  A   F  M    ++P+ VT+NIL   L K+GL+ +    +G +   +D     + 
Sbjct: 449 GDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHM---EDRGLQPNS 505

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T  +++D + +  +  +A  L+N + +K I    V Y+ ++ G+   G   +A+  F +
Sbjct: 506 LTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLR 565

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           + K+G L D  + + L++ LC+ G    AS     + +    PD ISY  +I   C  GD
Sbjct: 566 VAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGD 625

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           +  AR +   M+++ +  +  ++ V+++GY + G +  A  +   M S G+  ++  +  
Sbjct: 626 MRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTV 685

Query: 442 LI-------LAETRGGSIFDAFSL----KKEMLLDG-----IFPDVFTYNLLIGASCNLG 485
           L+       L     G   D  SL    K+  LL       I PDV  Y +LI   C   
Sbjct: 686 LLDGHLKEDLQRRWQGISRDKRSLLLRAKQNRLLSSMKEMEIEPDVPCYTVLIDGQCKSD 745

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           ++  A  L+DEML++G+TPD   YT LI G+C++G + +AE++F ++   G+  D + F 
Sbjct: 746 YLEQARGLFDEMLQKGLTPDHYAYTALINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFS 805

Query: 546 ILKKRYRRMKE 556
           +L +R  R ++
Sbjct: 806 VLNRRVLRNRQ 816



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/499 (24%), Positives = 209/499 (41%), Gaps = 64/499 (12%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC   ++     L    +++G  PD+  ++YL+   CK+G+L K     + M    
Sbjct: 301 VMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHG 360

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              NC   +  +  + ++    +    F    ++G+  + V +NI + A CK G + +AV
Sbjct: 361 LEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAV 420

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K LGE++       + D I  T L+  Y   GD   A   + +M + N++ D+V YN+L 
Sbjct: 421 KLLGEMMTVG---LSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILA 477

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G    G +   F     M  RG  P+ +TY  +++  C+   L EA   + ++ + G+ 
Sbjct: 478 SGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGID 537

Query: 364 PDQISYKTIIQG-----------------------------------LCIHGDIVKAREF 388
             ++ Y +++ G                                   LC  G+   A   
Sbjct: 538 NIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTV 597

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
             +MLEK+ VP+   ++ +I  Y + GD+ NA      M+  G+  +V  +  L+    +
Sbjct: 598 CSTMLEKNDVPDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCK 657

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ---------------- 492
            G + +A  L  +M   GI PD+  Y +L+      GH+   LQ                
Sbjct: 658 IGLMQEACELFAQMTSLGIKPDIIAYTVLLD-----GHLKEDLQRRWQGISRDKRSLLLR 712

Query: 493 -----LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
                L   M    I PD+  YT LI G C    +++A  +F ++   GL  DH  +  L
Sbjct: 713 AKQNRLLSSMKEMEIEPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAYTAL 772

Query: 548 KKRYRRMKESDKARDIHQK 566
              Y    E  KA D+ Q+
Sbjct: 773 INGYCSQGEVAKAEDLFQE 791



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 121/510 (23%), Positives = 204/510 (40%), Gaps = 89/510 (17%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE- 170
           CT   D R  + +  +LC                + G VP V T N L+    +  D E 
Sbjct: 165 CTTCCDARDTIGLFGELC----------------RLGVVPPVWTCNILLKFAAESCDSEI 208

Query: 171 -------------------------------KADHVIR---EMSEMRPSPNCATYNAFIT 196
                                          KAD   +   EM EM   P+   +++FI 
Sbjct: 209 VLSAYDEMKFFRLTLDAHSLRIITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSFII 268

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C   ++D A  +   +    ++   +  N+++  LCK+  L +  K L   +      
Sbjct: 269 GLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQG--- 325

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
            T D+   + L+ SY K G+  + L  +  M    ++ +    + L+  F   G  S   
Sbjct: 326 LTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVT 385

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            YF +    G   D + YN  ++  CK G +DEA    G +   G++PD+I Y  +I+G 
Sbjct: 386 EYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGY 445

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C+ GDI  AR+    ML+ +V P+   +N++  G  + G +   F +   M   G+  N 
Sbjct: 446 CLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNS 505

Query: 437 FTFNALILAETRGGSIFDA---FSLKKEMLLDGI-------------------------- 467
            T+  +I    RG ++ +A   F++ +E  +D I                          
Sbjct: 506 LTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLR 565

Query: 468 ------FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
                   D F+ + LI   C  G+   A  +   ML +   PD+I+Y++LI  +C  G+
Sbjct: 566 VAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGD 625

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           M+ A   F  +   GL +D I + +L   Y
Sbjct: 626 MRNARLWFHDMVQRGLPVDVIVYTVLMNGY 655



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 160/362 (44%), Gaps = 15/362 (4%)

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH---ALCKKGLL---GDAVKF 245
           N  IT      +    + LF  +   G+ P   T NIL+      C   ++    D +KF
Sbjct: 159 NCLITACTTCCDARDTIGLFGELCRLGVVPPVWTCNILLKFAAESCDSEIVLSAYDEMKF 218

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
                     + T D  +  I+  S F+     +A  +W +M +  ++ D+  ++  I G
Sbjct: 219 F---------RLTLDAHSLRIITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSFIIG 269

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C  G I  A+A   ++++     + I +N +++ LCK+ +L+E         + G+ PD
Sbjct: 270 LCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGLTPD 329

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
              Y  +I+  C  G+++K  +   +M+   +    HI + ++  + + G  S       
Sbjct: 330 IYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQ 389

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
                G+  +   +N  + A  + G++ +A  L  EM+  G+ PD   Y  LI   C  G
Sbjct: 390 KFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKG 449

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            I  A Q ++EML+  + PD++TY  L  G   RG + E  ++   ++  GL  + + + 
Sbjct: 450 DIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYG 509

Query: 546 IL 547
           ++
Sbjct: 510 VV 511



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/391 (21%), Positives = 146/391 (37%), Gaps = 19/391 (4%)

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E+ +    E++E R  P  +  N   T  C       A   F    + G R +  T+  +
Sbjct: 48  ERLNFAANELAERRSCP-LSPANVVKTLQCLKRRPAIAFAYFKDAESVGFRHDFSTYAEI 106

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           VH L   G          E+++   G     V     LMD   +       L        
Sbjct: 107 VHILSHSGQGRMLFSLFCEIVSPTSGGGPEIVP----LMDQLKRTCTTSYPL-------- 154

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
                 + A N LI       D       F ++ + G +P V T N LL    +    + 
Sbjct: 155 ------LFATNCLITACTTCCDARDTIGLFGELCRLGVVPPVWTCNILLKFAAESCDSEI 208

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
               Y  +    +  D  S + I + L       KA +  + M+E  V P+ H  +  I 
Sbjct: 209 VLSAYDEMKFFRLTLDAHSLRIITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSFII 268

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G   CG +  A++I   ++   V      FN ++    +   + +   L +  +  G+ P
Sbjct: 269 GLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGLTP 328

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D++ Y+ LI + C +G++   L  Y  M+  G+  +    + L++     G   +  E F
Sbjct: 329 DIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTEYF 388

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            K +  GL ID + + I    Y ++   D+A
Sbjct: 389 QKFRDSGLHIDGVLYNIAMDAYCKLGNMDEA 419



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/314 (18%), Positives = 131/314 (41%), Gaps = 32/314 (10%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK--RGFLPDVI----- 332
           A A + D      + D   Y  +++    +G     F+ FC+++    G  P+++     
Sbjct: 84  AFAYFKDAESVGFRHDFSTYAEIVHILSHSGQGRMLFSLFCEIVSPTSGGGPEIVPLMDQ 143

Query: 333 -------TYNTLL--NCL------CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
                  +Y  L   NCL      C   +  +    +G L + GV P   +   +++   
Sbjct: 144 LKRTCTTSYPLLFATNCLITACTTCCDAR--DTIGLFGELCRLGVVPPVWTCNILLKFAA 201

Query: 378 IHGDIVKAREFLLSMLEK----SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
              D     E +LS  ++     +  + H   +I     +      AF +   M+  GV 
Sbjct: 202 ESCD----SEIVLSAYDEMKFFRLTLDAHSLRIITRSLFQEKKADKAFKVWVEMIEMGVK 257

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            +V   ++ I+     G I  A+++ +E++ + +  +   +N+++   C    +    +L
Sbjct: 258 PDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKL 317

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
            +  +R+G+TPDI  Y+ LI+ +C  GN+ +  + +  + + GL  +      L + + +
Sbjct: 318 LENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTK 377

Query: 554 MKESDKARDIHQKW 567
           +  + +  +  QK+
Sbjct: 378 LGMASQVTEYFQKF 391



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 6/104 (5%)

Query: 92  LILKENLDRL-KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           L+L+   +RL  +M++       +E D   +  +I   C    +  A  L  +M+QKG  
Sbjct: 709 LLLRAKQNRLLSSMKEM-----EIEPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLT 763

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
           PD   +  L+N  C  G++ KA+ + +EM +    P+  T++  
Sbjct: 764 PDHYAYTALINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFSVL 807


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 188/415 (45%), Gaps = 6/415 (1%)

Query: 105 RDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC 164
           R  G VR     D+R   A++   C  G+   A  L   M  +G   D  T   +V   C
Sbjct: 172 RAAGGVR----PDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFC 227

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           + G       + R MSEM   PN   Y+A+I G C    + +A H+   M   G++PN  
Sbjct: 228 RQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVY 287

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           TH  L+  LCK G +  A +   +++     K   +V T T+++  Y K G   +A  L 
Sbjct: 288 THTSLIDGLCKIGWMERAFRLFLKLVKSSSYK--PNVHTYTVMIGGYCKEGKLARAEMLL 345

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
             M ++ +  +   Y  LI+G C  G    AF    +M   GFLP++ TYN ++   CK+
Sbjct: 346 GRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKK 405

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
           GK+ EA     + +  G+  D+++Y  +I   C  G I  A +    M EKS  P+ H +
Sbjct: 406 GKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTY 465

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
             II  Y +   +  +  + D  LS G+     T+ ++I    R G +  A  + + M+ 
Sbjct: 466 TTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQ 525

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            G  PD  TY  LI + C    +  A  L++ ML + + P  +T   L   +C R
Sbjct: 526 HGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRR 580



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 183/422 (43%), Gaps = 39/422 (9%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  PD  +   LV   C+ G  E+AD ++  M       + AT    +  +CR       
Sbjct: 176 GVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNV 235

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             LF  M+  G  PN V ++  +  LC++G                              
Sbjct: 236 TDLFRRMSEMGTPPNMVNYSAWIDGLCERG------------------------------ 265

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG- 326
              Y K     QA  +  +M  K ++ ++  +  LI+G C  G +  AF  F +++K   
Sbjct: 266 ---YVK-----QAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSS 317

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           + P+V TY  ++   CK+GKL  A    G + + G+AP+  +Y T+I G C  G   +A 
Sbjct: 318 YKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAF 377

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E +  M  +  +P  + +N II G+ + G +  A+ +  +  S G+  +  T+  LI   
Sbjct: 378 ELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEH 437

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G I  A  L K+M      PD+ TY  +I   C    +  + QL+D+ L  G+ P  
Sbjct: 438 CKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTK 497

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            TYT +I G+C  G +  A +VF ++   G   D I +  L     +    ++AR + + 
Sbjct: 498 QTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFET 557

Query: 567 WL 568
            L
Sbjct: 558 ML 559



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 193/422 (45%), Gaps = 7/422 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+R  C  G+      L R+M + GT P+++ ++  ++ LC+ G +++A HV+ EM    
Sbjct: 222 VVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKG 281

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLF-STMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             PN  T+ + I G C++  +++A  LF   + ++  +PN  T+ +++   CK+G L  A
Sbjct: 282 LKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARA 341

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              LG ++       T+   T T L+  + K G   +A  L N M  +    +I  YN +
Sbjct: 342 EMLLGRMVEQGLAPNTN---TYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAI 398

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I GFC  G I  A+        +G   D +TY  L+   CKQG +  A   +  +++   
Sbjct: 399 IGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSC 458

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  +Y TII   C    + ++++     L   +VP    +  +I GY R G L++A  
Sbjct: 459 HPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALK 518

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M+  G   +  T+ ALI +  +   + +A +L + ML   + P   T   L    C
Sbjct: 519 VFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYC 578

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               I +A+   D + +R       T   L++     GN+  A      +     A+DH 
Sbjct: 579 RRDKITIAVSFLDRLDKR---QQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHA 635

Query: 543 PF 544
            +
Sbjct: 636 TY 637



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 6/246 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I + C  G I  AL L ++M +K   PD+ T+  ++   C+   +E++ 
Sbjct: 423 LHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQ 482

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  +   +   P   TY + I GYCR+ +L  AL +F  M  +G  P+ +T+  L+ +L
Sbjct: 483 QLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSL 542

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+  L +A      +L  D      DV   T+  +  +   DK      + D   K  Q
Sbjct: 543 CKESRLEEARALFETML--DKHLVPCDVTRVTLAYE--YCRRDKITIAVSFLDRLDKRQQ 598

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
                 + L+      G++ +A  +   +L + +  D  TY + +N   +  +   AS  
Sbjct: 599 AHTA--DALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEI 656

Query: 354 YGVLSK 359
              +SK
Sbjct: 657 SEKISK 662


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 217/455 (47%), Gaps = 42/455 (9%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNY----LVNELCKIGDLEKADHVIREMSEMRPSPN 187
           G+I  A  L  +M++     D    NY    +V  LCK G LE+   +I +       PN
Sbjct: 179 GRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPN 238

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
              YN  I GYC+  +++ A  LF  +   G  P   T+  +++  CKKG      + L 
Sbjct: 239 IIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLM 298

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E+   +    T +V     ++D+ +K+G   +A+     M +   + DIV YN LI+G C
Sbjct: 299 EM---NSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSC 355

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            +G +S A     Q L +G +P+  +Y  L++  CKQG  D AS++   +++ G  PD +
Sbjct: 356 RDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLV 415

Query: 368 SYKTIIQGLCIHGDI-----------------------------------VKAREFLLSM 392
           +Y  ++ GL + G++                                     A+  L  M
Sbjct: 416 TYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEM 475

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           L++SV+P+  ++  ++DG+ R G+L  A  + +L +  G++  +  +NA+I    + G +
Sbjct: 476 LDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMM 535

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            DA +    M    + PD FTY+ +I        +  A +++ EM++    P+++TYT L
Sbjct: 536 KDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSL 595

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           I G C +G++  + ++F ++Q  GL  + + + IL
Sbjct: 596 INGFCRKGDLHRSLKIFREMQACGLVPNVVTYSIL 630



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 205/437 (46%), Gaps = 17/437 (3%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
           G + C  + D   +  +I   C  GK+  A  L  + + KG +P+  ++  L++  CK G
Sbjct: 334 GMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQG 393

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
             ++A + + EM+E    P+  TY A + G     E+D AL +   M   G+ P+   +N
Sbjct: 394 GYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYN 453

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           IL+  LCKK  L  A   L E+L   D     D      L+D + +NG+  +A  L+   
Sbjct: 454 ILMSGLCKKFKLPAAKLLLAEML---DQSVLPDAFVYATLVDGFIRNGNLDEARKLFELT 510

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            +K +   IV YN +I G+C  G +  A A   +M KR   PD  TY+T+++   KQ  L
Sbjct: 511 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 570

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           D A   +  + K    P+ ++Y ++I G C  GD+ ++ +    M    +VP    ++++
Sbjct: 571 DGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSIL 630

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF-----DAFSLKKE- 461
           I  + +   L +A S  + ML      N  TFN L+   ++ G+       + F   K+ 
Sbjct: 631 IGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQS 690

Query: 462 --------MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
                   M+ DG  P    YN ++   C  G    ALQL ++M  +G  PD +++  L+
Sbjct: 691 MFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALL 750

Query: 514 KGHCARGNMKEAEEVFA 530
            G C  G  KE + + +
Sbjct: 751 HGVCLEGRSKEWKNIVS 767



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 196/415 (47%), Gaps = 7/415 (1%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           T+ET    + A+I   C  G       L  +M  +G   +V  +N +++   K G + KA
Sbjct: 273 TVET----YGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKA 328

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
              I  M E    P+  TYN  I+G CR  ++ +A  L       G+ PN+ ++  L+HA
Sbjct: 329 VETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHA 388

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
            CK+G    A  +L E+    +     D++T   L+      G+   AL +   M ++ +
Sbjct: 389 YCKQGGYDRASNWLIEM---TERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGV 445

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D   YN+L++G C    + +A     +ML +  LPD   Y TL++   + G LDEA  
Sbjct: 446 FPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARK 505

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            + +  + G+ P  + Y  +I+G C  G +  A   +  M ++ + P+   ++ +IDGY 
Sbjct: 506 LFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYV 565

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +  DL  A  +   M+      NV T+ +LI    R G +  +  + +EM   G+ P+V 
Sbjct: 566 KQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVV 625

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           TY++LIG+ C    +  A   ++EML     P+ +T+  L+ G    G    +E+
Sbjct: 626 TYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEK 680



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 201/411 (48%), Gaps = 5/411 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G +  A  L  ++  KG +P V T+  ++N  CK GD +  D ++ EM+  
Sbjct: 244 TLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSR 303

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             + N   YN  I    +   + KA+     M   G +P+ VT+N L+   C+ G + +A
Sbjct: 304 GLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEA 363

Query: 243 VKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
            + L + L    GK    +  + T L+ +Y K G   +A     +M ++  + D+V Y  
Sbjct: 364 DQLLEQAL----GKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGA 419

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L++G  + G++  A     +ML+RG  PD   YN L++ LCK+ KL  A      +    
Sbjct: 420 LVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQS 479

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V PD   Y T++ G   +G++ +AR+     +EK + P    +N +I GY + G + +A 
Sbjct: 480 VLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAM 539

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           +  + M    ++ + FT++ +I    +   +  A  + +EM+     P+V TY  LI   
Sbjct: 540 ACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGF 599

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           C  G +H +L+++ EM   G+ P+++TY+ LI   C    + +A   F ++
Sbjct: 600 CRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEM 650



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 229/487 (47%), Gaps = 22/487 (4%)

Query: 86  VFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMI 145
           VF+ ++++L EN+ R++ M    P R  +         VI+     G +  AL L   ++
Sbjct: 109 VFSEMEVVL-ENM-RVEEM---SPTREAMSI-------VIQAYSDSGLVEKALELYYFVL 156

Query: 146 QKGT-VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN----AFITGYCR 200
           +  T  PDV+  N L+N L K+G +E A  +  EM E+  + +    N      + G C+
Sbjct: 157 KTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCK 216

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
             +L++   L       G  PN + +N L+   CKKG +  A     E+           
Sbjct: 217 EGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG---FLPT 273

Query: 261 VITSTILMDSYFKNGDKFQAL-ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           V T   +++ + K GD F+A+  L  +M  + +  ++  YN +I+    +G I  A    
Sbjct: 274 VETYGAIINGFCKKGD-FKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETI 332

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M++ G  PD++TYNTL++  C+ GK+ EA          G+ P++ SY  +I   C  
Sbjct: 333 EGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQ 392

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G   +A  +L+ M E+   P+   +  ++ G    G++  A +IR+ ML  GV  +   +
Sbjct: 393 GGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIY 452

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N L+    +   +  A  L  EML   + PD F Y  L+      G++  A +L++  + 
Sbjct: 453 NILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIE 512

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
           +G+ P I+ Y  +IKG+C  G MK+A     +++   LA D   +  +   Y +  + D 
Sbjct: 513 KGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDG 572

Query: 560 ARDIHQK 566
           A+ + ++
Sbjct: 573 AQKMFRE 579



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 198/443 (44%), Gaps = 6/443 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           IRD+ LG K     W+ R   Q     +   ++ L+  L +     + + V+  M     
Sbjct: 70  IRDVELGLKFFD--WVSRG--QYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEM 125

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFS-TMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           SP     +  I  Y     ++KAL L+   +      P+ +  N L++ L K G +  A 
Sbjct: 126 SPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIAR 185

Query: 244 KFLGEVLA-DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           K   E+L  D  G    D  ++ I++    K G   +   L  D + +    +I+ YN L
Sbjct: 186 KLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTL 245

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G+C  GD+  A   F ++  +GFLP V TY  ++N  CK+G           ++  G+
Sbjct: 246 IDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGL 305

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             +   Y TII     HG IVKA E +  M+E    P+   +N +I G  R G +S A  
Sbjct: 306 TVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQ 365

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + +  L  G+  N F++  LI A  + G    A +   EM   G  PD+ TY  L+    
Sbjct: 366 LLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLV 425

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G + +AL + ++ML RG+ PD   Y  L+ G C +  +  A+ + A++    +  D  
Sbjct: 426 VAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAF 485

Query: 543 PFRILKKRYRRMKESDKARDIHQ 565
            +  L   + R    D+AR + +
Sbjct: 486 VYATLVDGFIRNGNLDEARKLFE 508


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 195/393 (49%), Gaps = 3/393 (0%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            +I   C   +   AL L  KM++ G  P ++T   L+N  C+    ++A  ++  M+E+ 
Sbjct: 656  LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715

Query: 184  PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              PN   YN  I G C+  +L+ AL +F  M   GI  + VT+N L+  LC  G   DA 
Sbjct: 716  LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA 775

Query: 244  KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            + L +++     K   +VI  T L+D++ K G+  +A  L+ +M ++++  +I+ YN LI
Sbjct: 776  RLLRDMVKR---KIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLI 832

Query: 304  NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            NGFC+ G +  A   F  M+ +G  PDV+TYNTL+   CK  ++++    +  ++  G+ 
Sbjct: 833  NGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLV 892

Query: 364  PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
             D  +Y T+I G C  G +  A++    M++  V P+   +N+++D     G +  A  +
Sbjct: 893  GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVM 952

Query: 424  RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
             + +    +  ++ T+N +I    R   + +A+ L + +   G+  D   Y  +I   C 
Sbjct: 953  VEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCR 1012

Query: 484  LGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
             G    A +L   M   G  P    Y E ++ H
Sbjct: 1013 NGLRREADKLCTRMKEDGFMPSERIYDETLRDH 1045



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 216/444 (48%), Gaps = 7/444 (1%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
            ++ LD    M  + P+   +  D+ R +  I +L    +  T ++  ++M   G   D+
Sbjct: 46  FEDALDLFLEMVQSQPLPSVV--DFTRLLTAIANL---RRYETVIYFSQQMELFGISHDL 100

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            +   L++  C+   L  A  ++ +M ++   P+  T+ + + G+C  N +  A  L ++
Sbjct: 101 YSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVAS 160

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  +G  PN V +N L+  LCK G +  A++ L E+  +  G+  +D++T   L+     
Sbjct: 161 MVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEM--EKKGRLAADLVTYNTLLTGLCY 218

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           +G+  QA  +  DM ++ I  D+  +  LI+ F   G++  A   + QML+    P+ +T
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN+L+N LC  G+L  A   + +++  G  P+ ++Y T+I G C    +    +    M 
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMY 338

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            + +V +   +N +I GY + G L  A  I   M+S GV+ ++ T   L+      G I 
Sbjct: 339 REGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIG 398

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A     +M     +  +  YN++I   C    +  A +L+  +   G+ PD  TYT +I
Sbjct: 399 SAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMI 458

Query: 514 KGHCARGNMKEAEEVFAKIQTLGL 537
            G C  G  +EA+E+F +++  G+
Sbjct: 459 LGLCKNGPRREADELFRRMKEDGI 482



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 207/393 (52%), Gaps = 11/393 (2%)

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           EM + RP P+   +   +T   ++N+ D  ++LF  M N GI  +  +  IL+H  C+  
Sbjct: 605 EMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCS 664

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ-ALALWNDMFQKNIQTDI 296
               A+  LG+++    G   S V   ++L  + F  G++FQ A++L + M +  ++ ++
Sbjct: 665 RFSLALALLGKMM--KLGFQPSIVTLGSLL--NGFCQGNRFQEAVSLVDSMAELGLEPNV 720

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YN +ING C N D+++A   F  M K+G + D +TYNTL++ LC  G+  +A+     
Sbjct: 721 VIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRD 780

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + K  + P+ I +  +I      G++++A+     M+ +SV P    +N +I+G+   G 
Sbjct: 781 MVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGR 840

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L +A  + DLM+S G   +V T+N LI    +   + D   L  EM   G+  D FTYN 
Sbjct: 841 LGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNT 900

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C  G +++A ++++ M+  G+ PDI+TY  L+   C  G +++A  +   +Q   
Sbjct: 901 LIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQ 960

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
           + +D I + I+    + M  +DK   + + W L
Sbjct: 961 MDVDIITYNII---IQGMCRNDK---VKEAWCL 987



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 206/445 (46%), Gaps = 20/445 (4%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL L  +M+Q   +P V+    L+  +  +   E   +  ++M     S +  ++   I 
Sbjct: 49  ALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIH 108

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            +CR + L  AL +   M   G  P+ VT   L+H  C +  + DA   +  ++      
Sbjct: 109 CFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG--- 165

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN-IQTDIVAYNVLINGFCLNGDISSA 315
              +V+    L+D   KNGD   AL L N+M +K  +  D+V YN L+ G C +G+   A
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                 M KR   PDV T+  L++   KQG LDEA   Y  + ++ + P+ ++Y ++I G
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           LC+HG +  A++    M  K   P    +N +I+G+ +   + +   +   M   G+  +
Sbjct: 286 LCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGD 345

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
            FT+N LI    + G +  A  +   M+  G+ PD+ T+ +L+   C  G I  A+  ++
Sbjct: 346 TFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFN 405

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID-------------HI 542
           +M        I+ Y  +I G C    ++EA E+F ++   G+  D             + 
Sbjct: 406 DMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNG 465

Query: 543 PFRILKKRYRRMKESD---KARDIH 564
           P R   + +RRMKE     +A D H
Sbjct: 466 PRREADELFRRMKEDGIICQAEDGH 490



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 201/412 (48%), Gaps = 3/412 (0%)

Query: 133  KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
            K   A  L  +M+Q   +P ++    ++  + K+   +   ++  +M  +  S +  ++ 
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 193  AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
              I  +CR +    AL L   M   G +P+ VT   L++  C+     +AV  +  +   
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSM--A 712

Query: 253  DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
            + G   + VI +T++ +   KN D   AL ++  M +K I  D V YN LI+G C +G  
Sbjct: 713  ELGLEPNVVIYNTVI-NGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRW 771

Query: 313  SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
            + A      M+KR   P+VI +  L++   K+G L EA + Y  + +  V P+ ++Y ++
Sbjct: 772  TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSL 831

Query: 373  IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
            I G CI G +  A+     M+ K   P+   +N +I G+ +   + +   +   M   G+
Sbjct: 832  INGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGL 891

Query: 433  SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
              + FT+N LI    + G +  A  +   M+  G+ PD+ TYN+L+   CN G I  AL 
Sbjct: 892  VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALV 951

Query: 493  LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            + +++ +  +  DIITY  +I+G C    +KEA  +F  +   G+ +D I +
Sbjct: 952  MVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAY 1003



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 172/353 (48%), Gaps = 4/353 (1%)

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
           TG+      + AL LF  M  +   P+ V    L+ A+         + F  ++   +  
Sbjct: 38  TGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQM---ELF 94

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
             + D+ + TIL+  + +      AL++   M +      IV +  L++GFCL   I  A
Sbjct: 95  GISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDA 154

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG-VAPDQISYKTIIQ 374
           F+    M+K G+ P+V+ YNTL++CLCK G ++ A      + K G +A D ++Y T++ 
Sbjct: 155 FSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLT 214

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           GLC  G+  +A   L  M ++ + P+   +  +ID + + G+L  A  +   ML   +  
Sbjct: 215 GLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGP 274

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           N  T+N+LI      G ++ A      M   G FP+V TYN LI   C    +   ++L+
Sbjct: 275 NTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLF 334

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             M R G+  D  TY  LI G+C  G ++ A+++F+ + + G+  D I   IL
Sbjct: 335 QRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCIL 387



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 159/322 (49%), Gaps = 8/322 (2%)

Query: 94   LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
             +E +  + +M + G     LE +   +  VI  LC    +  AL +   M +KG V D 
Sbjct: 701  FQEAVSLVDSMAELG-----LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADA 755

Query: 154  LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            +T+N L++ LC  G    A  ++R+M + +  PN   + A I  + +   L +A +L+  
Sbjct: 756  VTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKE 815

Query: 214  MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
            M    + PN +T+N L++  C +G LGDA      +++        DV+T   L+  + K
Sbjct: 816  MIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG---CFPDVVTYNTLITGFCK 872

Query: 274  NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            +      + L+ +M  + +  D   YN LI+G+C  G ++ A   F +M+  G  PD++T
Sbjct: 873  SKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVT 932

Query: 334  YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
            YN LL+CLC  GK+++A      L K  +  D I+Y  IIQG+C +  + +A     S+ 
Sbjct: 933  YNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLT 992

Query: 394  EKSVVPEPHIWNVIIDGYGRCG 415
             K V  +   +  +I G  R G
Sbjct: 993  RKGVKLDAIAYITMISGLCRNG 1014



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 208/483 (43%), Gaps = 49/483 (10%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           L+ L  M   G     L  D   +  ++  LC  G+   A  + R M ++   PDV T  
Sbjct: 190 LELLNEMEKKG----RLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFT 245

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            L++   K G+L++A  + ++M +    PN  TYN+ I G C    L  A   F  MA+ 
Sbjct: 246 ALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASK 305

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G  PN VT+N L++  CK   + D +K    +  +       D  T   L+  Y + G  
Sbjct: 306 GCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREG---LVGDTFTYNTLIHGYCQVGKL 362

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             A  +++ M    +  DI+ + +L++G C+NG+I SA   F  M        ++ YN +
Sbjct: 363 RVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIM 422

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           ++ LCK  K++EA   +  L   GV PD  +Y  +I GLC +G   +A E    M E  +
Sbjct: 423 IHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSI----------RDLMLS---FGVSSNVFTFNALI- 443
           + +        DG+      +N  S+          R +M S   +   S+   +++L+ 
Sbjct: 483 ICQAE------DGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVG 536

Query: 444 LAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNL-------------GHIHL 489
           L      S    F  +  +LL+ G  P+  +++   GAS +                +H 
Sbjct: 537 LIPIASSSSVKGFVRRHLLLLERGNNPESRSFS---GASHHHHHHHHHHYRERLRSELHC 593

Query: 490 -----ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
                A  L+ EML+    P I+ +T ++              +F K++ LG++ D   F
Sbjct: 594 IKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSF 653

Query: 545 RIL 547
            IL
Sbjct: 654 TIL 656



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 132/296 (44%), Gaps = 42/296 (14%)

Query: 82   NPQAVF--NALDLILKE-NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
            +P  +F    +D  +KE NL   K +     +R ++  +   + ++I   C+ G++G A 
Sbjct: 787  DPNVIFFTALIDTFVKEGNLLEAKNLYKE-MIRRSVHPNILTYNSLINGFCIQGRLGDAK 845

Query: 139  WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
             +   M+ KG  PDV+T+N L+   CK   +E    +  EM+      +  TYN  I GY
Sbjct: 846  HMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGY 905

Query: 199  CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            C+  +L+ A  +F+ M + G+ P+ VT+NIL+  LC                        
Sbjct: 906  CQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLC------------------------ 941

Query: 259  SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
                           NG   +AL +  D+ +  +  DI+ YN++I G C N  +  A+  
Sbjct: 942  --------------NNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCL 987

Query: 319  FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
            F  + ++G   D I Y T+++ LC+ G   EA      + + G  P +  Y   ++
Sbjct: 988  FRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLR 1043



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 137/339 (40%), Gaps = 72/339 (21%)

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL----------------------- 338
           L  GF  +     A   F +M++   LP V+ +  LL                       
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 339 ------------NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
                       +C C+  +L  A    G + K G  P  +++ +++ G C+   I  A 
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG--------------- 431
             + SM++    P   ++N +ID   + GD++ A  + + M   G               
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 432 ---------------------VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
                                ++ +VFTF ALI A  + G++ +A  L K+ML   I P+
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPN 275

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             TYN LI   C  G ++ A + +D M  +G  P+++TY  LI G C    +++  ++F 
Sbjct: 276 TVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQ 335

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
           ++   GL  D   +  L   Y ++ +   A+DI   W++
Sbjct: 336 RMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFS-WMV 373


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 210/442 (47%), Gaps = 4/442 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           +C  G +  A  L  +M  +G VPD +T+N +++   K+G L+       EM +M   P+
Sbjct: 140 MCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 199

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TYNA I  +C+  +L   L  +  M  NG++PN V+++ LV A CK+G++  A+KF  
Sbjct: 200 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 259

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           ++          +  T T L+D+  K G+   A  L N+M Q  ++ ++V Y  LI+G C
Sbjct: 260 DMRR---VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 316

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
               +  A   F +M   G +P++ +YN L++   K   +D A      L   G+ PD +
Sbjct: 317 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 376

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            Y T I GLC    I  A+  +  M E  +     I+  ++D Y + G+ +    + D M
Sbjct: 377 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 436

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNLGH 486
               +   V TF  LI    +   +  A      +  D G+  +   +  +I   C    
Sbjct: 437 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 496

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A  L+++M+++G+ PD   YT L+ G+  +GN+ EA  +  K+  +G+ +D + +  
Sbjct: 497 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 556

Query: 547 LKKRYRRMKESDKARDIHQKWL 568
           L        +  KAR   ++ +
Sbjct: 557 LVWGLSHCNQLQKARSFLEEMI 578



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 189/416 (45%), Gaps = 19/416 (4%)

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
           LW  R +     VP     + L + L  +G LE+A     +M   R  P   + N  +  
Sbjct: 49  LWSTRNV----CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHR 104

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG------LLGDAVKFLGEVLA 251
           + ++ + D     F  M   G RP   T+NI++  +CK+G       L + +KF G V  
Sbjct: 105 FAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLV-- 162

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   D +T   ++D + K G     +  + +M     + D++ YN LIN FC  G 
Sbjct: 163 -------PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 215

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +     ++ +M   G  P+V++Y+TL++  CK+G + +A  FY  + + G+ P++ +Y +
Sbjct: 216 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 275

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I   C  G++  A      ML+  V      +  +IDG      +  A  +   M + G
Sbjct: 276 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 335

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           V  N+ ++NALI    +  ++  A  L  E+   GI PD+  Y   I   C+L  I  A 
Sbjct: 336 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 395

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            + +EM   GI  + + YT L+  +   GN  E   +  +++ L + +  + F +L
Sbjct: 396 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 451



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 178/401 (44%), Gaps = 3/401 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A+    KM +    P   + N L++   K+G  +      ++M      P   TY
Sbjct: 74  GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 133

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I   C+  +++ A  LF  M   G+ P+ VT+N ++    K G L D V F  E+  
Sbjct: 134 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM-- 191

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             D     DVIT   L++ + K G     L  + +M    ++ ++V+Y+ L++ FC  G 
Sbjct: 192 -KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 250

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A  ++  M + G +P+  TY +L++  CK G L +A      + + GV  + ++Y  
Sbjct: 251 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 310

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC    + +A E    M    V+P    +N +I G+ +  ++  A  + + +   G
Sbjct: 311 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 370

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  ++  +   I        I  A  +  EM   GI  +   Y  L+ A    G+    L
Sbjct: 371 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 430

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            L DEM    I   ++T+  LI G C    + +A + F +I
Sbjct: 431 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 471



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 190/415 (45%), Gaps = 4/415 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   + A+I   C  GK+   L   R+M   G  P+V++++ LV+  CK G +++A  
Sbjct: 197 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 256

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
              +M  +   PN  TY + I   C++  L  A  L + M   G+  N VT+  L+  LC
Sbjct: 257 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 316

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
               + +A +  G++   D      ++ +   L+  + K  +  +AL L N++  + I+ 
Sbjct: 317 DAERMKEAEELFGKM---DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 373

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D++ Y   I G C    I +A     +M + G   + + Y TL++   K G   E  H  
Sbjct: 374 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 433

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYGR 413
             + +  +    +++  +I GLC +  + KA ++   +     +     I+  +IDG  +
Sbjct: 434 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 493

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              +  A ++ + M+  G+  +   + +L+    + G++ +A +L+ +M   G+  D+  
Sbjct: 494 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLA 553

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           Y  L+    +   +  A    +EM+  GI PD +    ++K H   G + EA E+
Sbjct: 554 YTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 608



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 187/379 (49%), Gaps = 12/379 (3%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L  +   + ++I   C  G +  A  L  +M+Q G   +V+T+  L++ LC    ++
Sbjct: 263 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 322

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A+ +  +M      PN A+YNA I G+ +   +D+AL L + +   GI+P+ + +   +
Sbjct: 323 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 382

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LC    + +A K +   + +   KA S + T+  LMD+YFK+G+  + L L ++M + 
Sbjct: 383 WGLCSLEKI-EAAKVVMNEMKECGIKANSLIYTT--LMDAYFKSGNPTEGLHLLDEMKEL 439

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLDE 349
           +I+  +V + VLI+G C N  +S A  YF ++    G   +   +  +++ LCK  +++ 
Sbjct: 440 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 499

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A+  +  + + G+ PD+ +Y +++ G    G++++A      M E  +  +   +  ++ 
Sbjct: 500 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 559

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK----KEMLL- 464
           G   C  L  A S  + M+  G+  +     +++      G I +A  L+    K  LL 
Sbjct: 560 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLT 619

Query: 465 ---DGIFPDVFTYNLLIGA 480
              D   P++++   L+ +
Sbjct: 620 SDNDNALPNIYSDQNLVSS 638



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 171/362 (47%), Gaps = 12/362 (3%)

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI------- 266
           M  NG + +  ++ I+ H L    +  DA   L E++         DV+ ST        
Sbjct: 1   MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 60

Query: 267 -LMDSYFKN----GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
            + D+ F      G   +A+  ++ M +  +     + N L++ F   G       +F  
Sbjct: 61  GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 120

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M+  G  P V TYN +++C+CK+G ++ A   +  +   G+ PD ++Y ++I G    G 
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           +     F   M +    P+   +N +I+ + + G L         M   G+  NV +++ 
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 240

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           L+ A  + G +  A     +M   G+ P+ +TY  LI A+C +G++  A +L +EML+ G
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
           +  +++TYT LI G C    MKEAEE+F K+ T G+  +   +  L   + + K  D+A 
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 360

Query: 562 DI 563
           ++
Sbjct: 361 EL 362



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 15/282 (5%)

Query: 85  AVFNAL--DLILKENLDR----LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
           A +NAL    +  +N+DR    L  ++  G     ++ D   +   I  LC   KI  A 
Sbjct: 341 ASYNALIHGFVKAKNMDRALELLNELKGRG-----IKPDLLLYGTFIWGLCSLEKIEAAK 395

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            +  +M + G   + L +  L++   K G+  +  H++ EM E+       T+   I G 
Sbjct: 396 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 455

Query: 199 CRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
           C+   + KA+  F+ ++N+ G++ N      ++  LCK   +  A     +++       
Sbjct: 456 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG---L 512

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
             D    T LMD  FK G+  +ALAL + M +  ++ D++AY  L+ G      +  A +
Sbjct: 513 VPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARS 572

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           +  +M+  G  PD +   ++L    + G +DEA      L K
Sbjct: 573 FLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 614


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 221/459 (48%), Gaps = 38/459 (8%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L R++ +    P+V T N +++ LCK G+L +A  +   M  M  SP+  TYN+ I GY 
Sbjct: 186 LVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYG 245

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +  EL++   L S M  +G   + VT+N L++   K G +  A  + GE+         +
Sbjct: 246 KCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEM---KRLGVMA 302

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +V+T +  +D++ K G   +A+ L+  M  + +  +   Y  L++G C  G +  A    
Sbjct: 303 NVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLL 362

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ----- 374
            +M+ +G +P+V+TY  +++ LCK+GK+  A     ++ + GV  +++ Y T+I      
Sbjct: 363 DEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMN 422

Query: 375 ------------------------------GLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
                                         GLC    + +A+  L  M +  + P   I+
Sbjct: 423 KNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIY 482

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
             I+D + + G  S A ++   +   G+  NV T+ ALI    + GSI++A S   +M  
Sbjct: 483 TTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRE 542

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            G+ P+V  Y  LI   C +G +  A+ L +EM+ +G++ D + YT LI GH  +G+++ 
Sbjct: 543 LGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQG 602

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           A  + AK+   GL +D   +      +  M    +AR +
Sbjct: 603 AFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGV 641



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 208/436 (47%), Gaps = 32/436 (7%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++     L  +M + G   DV+T+N L+N   K G +EKA     EM  +    N  T 
Sbjct: 248 GELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTL 307

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE--- 248
           + F+  +C+   + +A+ LF+ M   G+ PN  T+  LV   CK G L DA+  L E   
Sbjct: 308 STFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH 367

Query: 249 -----------VLAD---DDGK-ATSDVITS--------------TILMDSYFKNGDKFQ 279
                      V+ D    +GK A +D + S              T L+  +F N +  +
Sbjct: 368 QGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSER 427

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           AL L N+M  K ++ D+  Y  LI G C    +  A +   +M   G  P+ + Y T+++
Sbjct: 428 ALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMD 487

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
              K GK  EA      +  +G+ P+ ++Y  +I GLC  G I +A      M E  + P
Sbjct: 488 AFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDP 547

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
              ++  +IDG+ + G LS A  + + M+  G+S +   + +LI    + G +  AF+LK
Sbjct: 548 NVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALK 607

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            +M+  G+  D++ Y   I   CN+  +  A  +  EM+  GITPD   Y  LI+ +   
Sbjct: 608 AKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKL 667

Query: 520 GNMKEAEEVFAKIQTL 535
           GNM+EA  +  +++++
Sbjct: 668 GNMEEASSLQNEMESV 683



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 186/370 (50%), Gaps = 8/370 (2%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +++E +     MR    VR  +  ++  + +++   C  G++  A+ L  +M+ +G VP+
Sbjct: 319 LVREAMKLFAQMR----VRGMMPNEFT-YTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPN 373

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V+T+  +V+ LCK G +  AD V+  M       N   Y   I G+      ++AL L +
Sbjct: 374 VVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLN 433

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M N G+  +   +  L+  LCK   L +A   L ++  DD G   + VI +TI MD++F
Sbjct: 434 EMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKM--DDCGLRPNTVIYTTI-MDAFF 490

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G + +A+AL + +    +Q ++V Y  LI+G C  G I  A ++F +M + G  P+V 
Sbjct: 491 KAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQ 550

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            Y TL++  CK G L +A H    +   G++ D++ Y ++I G    GD+  A      M
Sbjct: 551 VYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKM 610

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +E  +  + + +   I G+     +  A  +   M+  G++ +   +N LI    + G++
Sbjct: 611 IETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNM 670

Query: 453 FDAFSLKKEM 462
            +A SL+ EM
Sbjct: 671 EEASSLQNEM 680



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 163/368 (44%), Gaps = 29/368 (7%)

Query: 227 NILVHALCKKGLLGDAVKFLGEV------------------LADD----------DGKAT 258
           + L+  L   GLL DAV+ L  V                  LA +          +    
Sbjct: 137 DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPA 196

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            +V T  I++D   K G+  +A AL+  M       D+V YN LI+G+   G++      
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             +M K G   DV+TYN L+NC  K G +++A  ++G + + GV  + ++  T +   C 
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCK 316

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G + +A +    M  + ++P    +  ++DG  + G L +A  + D M+  G+  NV T
Sbjct: 317 EGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 376

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +  ++    + G +  A  +   M   G+  +   Y  LI       +   AL L +EM 
Sbjct: 377 YTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMK 436

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF-RILKKRYRRMKES 557
            +G+  D+  Y  LI G C    + EA+ +  K+   GL  + + +  I+   ++  KES
Sbjct: 437 NKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKES 496

Query: 558 DKARDIHQ 565
           +    +H+
Sbjct: 497 EAVALLHK 504



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 131/305 (42%), Gaps = 68/305 (22%)

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV---------------------- 362
           R  LP V  ++TLL+ L   G LD+A      + +  V                      
Sbjct: 129 RSALPSV--FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGL 186

Query: 363 ---------APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
                    AP+  ++  +I  LC  G++V+AR   + M      P+   +N +IDGYG+
Sbjct: 187 VRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGK 246

Query: 414 CGDLSN-----------------------------------AFSIRDLMLSFGVSSNVFT 438
           CG+L                                     A+S    M   GV +NV T
Sbjct: 247 CGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVT 306

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
            +  + A  + G + +A  L  +M + G+ P+ FTY  L+  +C  G +  A+ L DEM+
Sbjct: 307 LSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV 366

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
            +G+ P+++TYT ++ G C  G +  A++V + ++  G+  + + +  L   +   K S+
Sbjct: 367 HQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSE 426

Query: 559 KARDI 563
           +A D+
Sbjct: 427 RALDL 431


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 187/374 (50%), Gaps = 6/374 (1%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            YNA + GYC   +LD A  L + M    + P+  T+N L+  LC +G   +A+  L E+
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           L     +   DV+T TIL+++  K     QA+ L ++M  K    DIV YNV++NG C  
Sbjct: 59  LRR---RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 115

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G +  A  +   +   G  P+ ++YN +L  LC   + ++A    G + + G  P+ +++
Sbjct: 116 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 175

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             +I  LC  G +  A E L  + +    P    +N ++  + +   +  A +  DLM+S
Sbjct: 176 NMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 235

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G   ++ ++N L+ A  R G +  A  L  ++   G  P + +YN +I      G    
Sbjct: 236 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 295

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           AL+L +EM+ +G+ PDIITY+ +  G C    +++A   F K+Q +G+  + + +  +  
Sbjct: 296 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 355

Query: 550 RYRRMKESDKARDI 563
              + +E+  A D+
Sbjct: 356 GLCKRRETHSAIDL 369



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 196/419 (46%), Gaps = 38/419 (9%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  +IR LC  G+   AL +  +M+++  VPDV+T+  L+   CK    ++A 
Sbjct: 28  VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 87

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM +   +P+  TYN  + G C+   +D A+     + + G  PN V++NI++  L
Sbjct: 88  KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 147

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C      DA + +GE                                      M QK   
Sbjct: 148 CTAERWEDAEELMGE--------------------------------------MGQKGCP 169

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++V +N+LI+  C  G +  A     Q+ K G  P+ ++YN LL+  CKQ K+D+A  F
Sbjct: 170 PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAF 229

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             ++   G  PD +SY T++  LC  G++  A E L  + +K   P    +N +IDG  +
Sbjct: 230 LDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTK 289

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G    A  + + M+S G+  ++ T++ +     R   I DA     ++   GI P+   
Sbjct: 290 AGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVL 349

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           YN +I   C     H A+ L+  M+  G  P+  TYT LI+G    G +KEA ++  ++
Sbjct: 350 YNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 126/270 (46%), Gaps = 4/270 (1%)

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           +AYN ++ G+C  G + +A     +M      PD  TYNTL+  LC +G+   A      
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + +    PD ++Y  +++  C      +A + L  M +K   P+   +NV+++G  + G 
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           + +A      + S+G   N  ++N ++          DA  L  EM   G  P+V T+N+
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C  G +  AL++ +++ + G TP+ ++Y  L+   C +  M +A      + + G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 537 LAIDHIPFRILKKRYRRMKESDKARD-IHQ 565
              D + +  L     R  E D A + +HQ
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQ 267


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 213/438 (48%), Gaps = 15/438 (3%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D LK M + G     L+ +   + AV+   C  G+   A  L   +  KG  P+V+T+  
Sbjct: 185 DFLKEMEEMG-----LDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTL 239

Query: 159 LVNELCKIGDLEKADHVIREMSE-MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
           LV   CK G +E+A+ V++E+ E  +   +   Y A I GYC+   ++ A  +   M + 
Sbjct: 240 LVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDA 299

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G++ N   +N +++  CK G +G+  K L    A++      D  +   L+D Y + G  
Sbjct: 300 GVQVNMFVYNTMINGYCKLGRMGEVEKLLQ---ANEYRGVNLDEYSYNTLVDGYCRKGFM 356

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +A    + M +       + YN L+NGFC  G I  A   +  MLKRG +P+ I+ +TL
Sbjct: 357 TKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTL 416

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           L+   K GK ++A + +      G+A + ++  T+I GLC +  + +A E    M E S 
Sbjct: 417 LDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSC 476

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA---ETRGGSIFD 454
             +   +  +IDGY + GDL  A  IR  M + G   +V  FN+ I       + G + D
Sbjct: 477 PCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVND 536

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
              ++ EM   G+ P+  TY  LI   C  G++H A  LY EM+ +G+ P++   + L+ 
Sbjct: 537 ---IRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVS 593

Query: 515 GHCARGNMKEAEEVFAKI 532
                G + EA  V  K+
Sbjct: 594 CFYREGKVDEANLVLQKL 611



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 231/507 (45%), Gaps = 64/507 (12%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  G++  A  +R +MI  G   ++  +N ++N  CK+G + + + +++     
Sbjct: 275 ALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYR 334

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             + +  +YN  + GYCR   + KA      M  NG     +T+N L++  C +G + DA
Sbjct: 335 GVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDA 394

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K    +L         + I+ + L+D +FK G   QAL LW +   + +  ++V  N +
Sbjct: 395 LKLWFLMLKRG---VVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTV 451

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA------------ 350
           ING C N  ++ A   F +M +     D +TY TL++  CK G L  A            
Sbjct: 452 INGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGF 511

Query: 351 --------SHFYGV---------------LSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
                   S   G+               +S  G++P+ ++Y  +I G C  G++  A  
Sbjct: 512 VPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACI 571

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA------FSIRDLM-------LSFGVSS 434
               M+EK + P   I +V++  + R G +  A       +  D++       L+ G  +
Sbjct: 572 LYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVA 631

Query: 435 NVFT-------------FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           ++               +N +IL   + G + DA +L +++ + G  PD FTY+ LI   
Sbjct: 632 HIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGC 691

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
              G I LA  L DEML   +TP+I+TY  LI G C   N+  A  +F K+Q+ G++ + 
Sbjct: 692 SASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNA 751

Query: 542 IPFRILKKRYRRMKESDKARDIHQKWL 568
           I +  L   + +   + +A  + QK +
Sbjct: 752 ITYNTLIDGHCKDGNTTEAFKLKQKMI 778



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 206/421 (48%), Gaps = 26/421 (6%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC   ++  A  L  +M +     D LT+  L++  CK+GDL +A  +  EM  + 
Sbjct: 451 VINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLG 510

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   +N+FITG     +  K   +   M+  G+ PN VT+  L+   CK+G L DA 
Sbjct: 511 FVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDAC 570

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E++   +     ++   ++L+  +++ G   +A    N + QK   TD++      
Sbjct: 571 ILYFEMV---EKGLKPNLFICSVLVSCFYREGKVDEA----NLVLQKLADTDMIQ----- 618

Query: 304 NGFCLNGDISSA------FAYFCQMLKRGFLPDV-ITYNTLLNCLCKQGKLDEASHFYGV 356
                  D S++       A+  + L  G      I +N ++  LCK G++ +A + +  
Sbjct: 619 -------DCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFED 671

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           L   G  PD  +Y ++I G    G I  A      ML   + P    +N +I G  +  +
Sbjct: 672 LKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCN 731

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +S A S+ + + S G+S N  T+N LI    + G+  +AF LK++M+ +GI P VFTY +
Sbjct: 732 VSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTI 791

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C  G++  A++L D+M+   + P+ ITY  LI+G+   GNMK   +++ ++   G
Sbjct: 792 LIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICG 851

Query: 537 L 537
           L
Sbjct: 852 L 852



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 216/457 (47%), Gaps = 31/457 (6%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C  G I  AL L   M+++G VP+ ++ + L++   K G  E+A ++ +E     
Sbjct: 381 LLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARG 440

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            + N  T N  I G C+   + +A  LF  M       + +T+  L+   CK G LG A 
Sbjct: 441 LARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRAT 500

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYF-KNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +   E+  ++ G   S  + ++ +   +  K   K   + +  +M  K +  + V Y  L
Sbjct: 501 QIRIEM--ENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRV--EMSAKGLSPNTVTYGAL 556

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G+C  G++  A   + +M+++G  P++   + L++C  ++GK+DEA+     L+ T +
Sbjct: 557 IAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDM 616

Query: 363 APD--------------------------QISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
             D                          +I +  +I GLC  G +  AR     +  K 
Sbjct: 617 IQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKG 676

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
            +P+   ++ +I G    G +  AF +RD MLS  ++ N+ T+N+LI    +  ++  A 
Sbjct: 677 FIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAV 736

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
           SL  ++   GI P+  TYN LI   C  G+   A +L  +M++ GI P + TYT LI G 
Sbjct: 737 SLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGL 796

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           C +G M+EA ++  ++    +  + I +  L + Y R
Sbjct: 797 CTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYAR 833



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 190/441 (43%), Gaps = 39/441 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  L   G IGTA+ + ++M   GT+PD  T   +    C+ G +  A   ++EM EM 
Sbjct: 135 LLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMG 194

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N   Y+A + GYCR+ + + A  L  ++   G+ PN                     
Sbjct: 195 LDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPN--------------------- 233

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVL 302
                            V+T T+L+  Y K G   +A  +  ++ + + I  D VAY  L
Sbjct: 234 -----------------VVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGAL 276

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING+C  G +  A     +M+  G   ++  YNT++N  CK G++ E           GV
Sbjct: 277 INGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGV 336

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D+ SY T++ G C  G + KA E    M+          +N +++G+   G + +A  
Sbjct: 337 NLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALK 396

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +  LML  GV  N  + + L+    + G    A +L KE L  G+  +V T N +I   C
Sbjct: 397 LWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLC 456

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               +  A +L+  M       D +TY  LI G+C  G++  A ++  +++ LG      
Sbjct: 457 KNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVE 516

Query: 543 PFRILKKRYRRMKESDKARDI 563
            F          K+S K  DI
Sbjct: 517 MFNSFITGLFIAKQSGKVNDI 537



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 80/350 (22%), Positives = 172/350 (49%), Gaps = 8/350 (2%)

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS--DVITSTILMDSYFKNGDKFQAL 281
            + ++L+ A    G L DA+        D+ GKA S   + +   L++   + GD   A+
Sbjct: 95  ASFDLLLRAHADAGQLKDALYVF-----DEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAV 149

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
           A++  M       D     ++   +C +G ++ A  +  +M + G   +++ Y+ +++  
Sbjct: 150 AVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGY 209

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE-KSVVPE 400
           C+ G+ + A      L   G++P+ ++Y  +++G C  G + +A + +  + E + +V +
Sbjct: 210 CRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVID 269

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +  +I+GY + G + +A  +RD M+  GV  N+F +N +I    + G + +   L +
Sbjct: 270 EVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQ 329

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
                G+  D ++YN L+   C  G +  A +  D M+R G T   +TY  L+ G C+RG
Sbjct: 330 ANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRG 389

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            + +A +++  +   G+  + I    L   + +  ++++A ++ ++ L R
Sbjct: 390 AIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLAR 439



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 124/284 (43%), Gaps = 3/284 (1%)

Query: 280 ALALWNDMFQ--KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
           A  L+ D+ +  K+      ++++L+      G +  A   F +M K G    + + N L
Sbjct: 76  APTLFPDLVEVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRL 135

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           LN L + G +  A   +  +   G  PD  +   + +  C  G +  A +FL  M E  +
Sbjct: 136 LNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGL 195

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
                 ++ ++DGY R G    A  +   +   G+S NV T+  L+    + G + +A  
Sbjct: 196 DVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEK 255

Query: 458 LKKEMLL-DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
           + KE+   + I  D   Y  LI   C  G +  A ++ DEM+  G+  ++  Y  +I G+
Sbjct: 256 VVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGY 315

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           C  G M E E++    +  G+ +D   +  L   Y R     KA
Sbjct: 316 CKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKA 359



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 3/167 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I      G I  A  LR +M+     P+++T+N L+  LCK  ++ +A  +  ++ 
Sbjct: 684 YSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQ 743

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               SPN  TYN  I G+C+     +A  L   M   GI+P   T+ IL+H LC +G + 
Sbjct: 744 SKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYME 803

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           +A+K L +++ ++      + IT   L+  Y + G+      L+N+M
Sbjct: 804 EAIKLLDQMIENN---VDPNFITYWTLIQGYARCGNMKAITKLYNEM 847



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 61/131 (46%)

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           S +  +F+ L+ A    G + DA  +  EM   G    + + N L+      G I  A+ 
Sbjct: 91  SFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVA 150

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           ++ +M   G  PD  T   + K +C  G +  A +   +++ +GL ++ + +  +   Y 
Sbjct: 151 VFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYC 210

Query: 553 RMKESDKARDI 563
           R+ +++ AR +
Sbjct: 211 RIGQTEVARKL 221


>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 234/525 (44%), Gaps = 54/525 (10%)

Query: 87  FNALDLILK---------ENLDRLKTMRDTGPVRCTLETDYRRHVAVI-RDLCLGGKIGT 136
           F+ LD +++         E L+ L  MR+ G       T     ++++ R L   G  G 
Sbjct: 187 FSVLDTLMQAFVKSEMHFEALEILSKMREVGV------TPNPSAISILFRLLIRAGDCGA 240

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
              L   +++KG  P+  T N L+ E C+ G     + ++  M + R  P+  +YN  I 
Sbjct: 241 VWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIN 300

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
             C   +   ALHL + M  NG +P+  T   ++ A CK+G +  A K+  E+   +D  
Sbjct: 301 ANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEI---EDMG 357

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING----------- 305
            + + I   I++  Y K  D  QA  L+ +M  K+I  D + +N L+ G           
Sbjct: 358 LSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGN 417

Query: 306 ------------------------FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
                                    C  G    A      +L++G  P V+ +N+++   
Sbjct: 418 RLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAY 477

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
              G  + A + YG++ K G+ P   +  +++  L   G + +A   L  M++K      
Sbjct: 478 GNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTN 537

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             + V++DGY R G ++ A S+ + M   GV  +   F A I      G + DA+ +  +
Sbjct: 538 MAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSD 597

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           ML  G  P+ F YN LIG  C +G ++ AL+L  EM +RG+ PDI T   +I G C +G 
Sbjct: 598 MLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGR 657

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           MK A E F  +  +GL+ D + +  L   Y +  +   A D+  K
Sbjct: 658 MKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMK 702



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 208/417 (49%), Gaps = 4/417 (0%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L R +   G + D    +  V  LC  G  ++A  ++  + E    P+   +N+ I  Y 
Sbjct: 419 LLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYG 478

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
                ++A + +  M   G+ P+  T + L+ +L +KG L +A   L +++  D G   +
Sbjct: 479 NAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMI--DKGFPVT 536

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           + +  T+L+D YF+ G    A +LWN+M  + +  D VA+   ING C++G ++ A+  F
Sbjct: 537 N-MAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVF 595

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             ML++GF+P+   YN+L+   CK GKL+EA      ++K G+ PD  +   II GLC  
Sbjct: 596 SDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQ 655

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G +  A E  + M    + P+   +N +IDGY +  D+  A  +   M   G   ++ T+
Sbjct: 656 GRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTY 715

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N  I        I  A  + +E++  GI P+  TYN +I A CN+   H A+ L  ++L+
Sbjct: 716 NIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCNVILDH-AMILTAKLLK 774

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
               P+ +T   L+   C +G  ++A     K+  + L  D    +++ + YR ++E
Sbjct: 775 MAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHLDFDETTHKLMNRAYRALEE 831



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 220/469 (46%), Gaps = 25/469 (5%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
           G  RC  E D   +  VI   CL G+   AL L   MI+ G  P + T   +++  CK G
Sbjct: 284 GKFRC--EPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEG 341

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           ++E A     E+ +M  S N   YN  I+GY +  ++ +A  LF  M    I P+ +T N
Sbjct: 342 NVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFN 401

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN---------GDKF 278
            LV    + G              +D  +   D+  S +L DS   +         G   
Sbjct: 402 TLVAGHYRYGK------------EEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYD 449

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A+ L  ++ +K I   +VA+N +I  +   G    AF  +  M+K G  P   T ++LL
Sbjct: 450 EAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLL 509

Query: 339 NCLCKQGKLDEAS-HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
             L ++G LDEA    Y ++ K G     +++  ++ G    G +  A      M  + V
Sbjct: 510 ISLVRKGSLDEAWIALYDMIDK-GFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGV 568

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P+   +   I+G    G +++A+ +   ML  G   N F +N+LI    + G + +A  
Sbjct: 569 FPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALK 628

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L +EM   G+ PD+FT N++I   C  G + LA++ + +M R G++PDI+TY  LI G+C
Sbjct: 629 LVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYC 688

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
              ++  A+++  K+   G   D   + I    Y  +++ ++A  I ++
Sbjct: 689 KAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEE 737



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 39/248 (15%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  GK+  AL L R+M ++G +PD+ T N ++  LCK G ++ A     +M  M
Sbjct: 612 SLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRM 671

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SP+  TYN  I GYC+  ++  A  L   M+++G  P+  T+NI +H  C    +  A
Sbjct: 672 GLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRA 731

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V  L E+++                                        I  + V YN +
Sbjct: 732 VMILEELIS--------------------------------------VGIVPNTVTYNTM 753

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           IN  C N  +  A     ++LK  F+P+ +T N LL+  CKQG  ++A  +   LS+  +
Sbjct: 754 INAVC-NVILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHL 812

Query: 363 APDQISYK 370
             D+ ++K
Sbjct: 813 DFDETTHK 820



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 122/314 (38%), Gaps = 35/314 (11%)

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           SD      LM ++ K+   F+AL + + M +  +  +  A ++L       GD  + +  
Sbjct: 185 SDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKL 244

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           F  ++++G  P+  T+N L+   C++G          V+ K    PD  SY  +I   C+
Sbjct: 245 FGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCL 304

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G    A   L  M+E    P    +  IID + + G++  A    D +   G+S N   
Sbjct: 305 KGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIV 364

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS----------------- 481
           +N +I    +   I  A  L +EM    I PD  T+N L+                    
Sbjct: 365 YNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLS 424

Query: 482 ------------------CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
                             C  G    A++L + +L +GI P ++ +  +I  +   G  +
Sbjct: 425 VSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEE 484

Query: 524 EAEEVFAKIQTLGL 537
            A   +  +   GL
Sbjct: 485 RAFYAYGIMVKFGL 498



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 1/250 (0%)

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           S   A F     R +  D    +TL+    K     EA      + + GV P+  +   +
Sbjct: 169 SKNLAAFMWEGHRVYESDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISIL 228

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
            + L   GD     +    ++ K   P    +N++I  + R G      ++  +M  F  
Sbjct: 229 FRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRC 288

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +V+++N +I A    G    A  L   M+ +G  P + T+  +I A C  G++ LA +
Sbjct: 289 EPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARK 348

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL-KKRY 551
            +DE+   G++ + I Y  +I G+    ++ +A  +F +++T  +  D I F  L    Y
Sbjct: 349 YFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHY 408

Query: 552 RRMKESDKAR 561
           R  KE D  R
Sbjct: 409 RYGKEEDGNR 418



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 2/142 (1%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L  D   +  +I   C    +G A  L  KM   G  PD+ T+N  ++  C +  + 
Sbjct: 670 RMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKIN 729

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  ++ E+  +   PN  TYN  I   C V  LD A+ L + +      PN VT N+L+
Sbjct: 730 RAVMILEELISVGIVPNTVTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLL 788

Query: 231 HALCKKGLLGDAVKFLGEVLAD 252
              CK+G+   A+ F G+ L++
Sbjct: 789 SQFCKQGMPEKAI-FWGQKLSE 809


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 209/440 (47%), Gaps = 4/440 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           +C  G +  A  L  +M  +G VPD +T+N +++   K+G L+       EM +M   P+
Sbjct: 272 MCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 331

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TYNA I  +C+  +L   L  +  M  NG++PN V+++ LV A CK+G++  A+KF  
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           ++          +  T T L+D+  K G+   A  L N+M Q  ++ ++V Y  LI+G C
Sbjct: 392 DM---RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
               +  A   F +M   G +P++ +YN L++   K   +D A      L   G+ PD +
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            Y T I GLC    I  A+  +  M E  +     I+  ++D Y + G+ +    + D M
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNLGH 486
               +   V TF  LI    +   +  A      +  D G+  +   +  +I   C    
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A  L+++M+++G+ PD   YT L+ G+  +GN+ EA  +  K+  +G+ +D + +  
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688

Query: 547 LKKRYRRMKESDKARDIHQK 566
           L        +  KAR   ++
Sbjct: 689 LVWGLSHCNQLQKARSFLEE 708



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 195/436 (44%), Gaps = 19/436 (4%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            LW  R +     VP     + L + L  +G LE+A     +M   R  P   + N  + 
Sbjct: 180 VLWSTRNV----CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG------LLGDAVKFLGEVL 250
            + ++ + D     F  M   G RP   T+NI++  +CK+G       L + +KF G V 
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLV- 294

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                    D +T   ++D + K G     +  + +M     + D++ YN LIN FC  G
Sbjct: 295 --------PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +     ++ +M   G  P+V++Y+TL++  CK+G + +A  FY  + + G+ P++ +Y 
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           ++I   C  G++  A      ML+  V      +  +IDG      +  A  +   M + 
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV  N+ ++NALI    +  ++  A  L  E+   GI PD+  Y   I   C+L  I  A
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
             + +EM   GI  + + YT L+  +   GN  E   +  +++ L + +  + F +L   
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586

Query: 551 YRRMKESDKARDIHQK 566
             + K   KA D   +
Sbjct: 587 LCKNKLVSKAVDYFNR 602



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 178/402 (44%), Gaps = 3/402 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A+    KM +    P   + N L++   K+G  +      ++M      P   TY
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I   C+  +++ A  LF  M   G+ P+ VT+N ++    K G L D V F  E+  
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM-- 323

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             D     DVIT   L++ + K G     L  + +M    ++ ++V+Y+ L++ FC  G 
Sbjct: 324 -KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A  ++  M + G +P+  TY +L++  CK G L +A      + + GV  + ++Y  
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC    + +A E    M    V+P    +N +I G+ +  ++  A  + + +   G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  ++  +   I        I  A  +  EM   GI  +   Y  L+ A    G+    L
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            L DEM    I   ++T+  LI G C    + +A + F +I 
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 190/415 (45%), Gaps = 4/415 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   + A+I   C  GK+   L   R+M   G  P+V++++ LV+  CK G +++A  
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
              +M  +   PN  TY + I   C++  L  A  L + M   G+  N VT+  L+  LC
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
               + +A +  G++   D      ++ +   L+  + K  +  +AL L N++  + I+ 
Sbjct: 449 DAERMKEAEELFGKM---DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D++ Y   I G C    I +A     +M + G   + + Y TL++   K G   E  H  
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYGR 413
             + +  +    +++  +I GLC +  + KA ++   +     +     I+  +IDG  +
Sbjct: 566 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              +  A ++ + M+  G+  +   + +L+    + G++ +A +L+ +M   G+  D+  
Sbjct: 626 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLA 685

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           Y  L+    +   +  A    +EM+  GI PD +    ++K H   G + EA E+
Sbjct: 686 YTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 172/363 (47%), Gaps = 12/363 (3%)

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI------ 266
           +M  NG + +  ++ I+ H L    +  DA   L E++         DV+ ST       
Sbjct: 132 SMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG 191

Query: 267 --LMDSYFKN----GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
             + D+ F      G   +A+  ++ M +  +     + N L++ F   G       +F 
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            M+  G  P V TYN +++C+CK+G ++ A   +  +   G+ PD ++Y ++I G    G
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            +     F   M +    P+   +N +I+ + + G L         M   G+  NV +++
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            L+ A  + G +  A     +M   G+ P+ +TY  LI A+C +G++  A +L +EML+ 
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 431

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G+  +++TYT LI G C    MKEAEE+F K+ T G+  +   +  L   + + K  D+A
Sbjct: 432 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491

Query: 561 RDI 563
            ++
Sbjct: 492 LEL 494



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 177/354 (50%), Gaps = 4/354 (1%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L  +   + ++I   C  G +  A  L  +M+Q G   +V+T+  L++ LC    ++
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A+ +  +M      PN A+YNA I G+ +   +D+AL L + +   GI+P+ + +   +
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LC    + +A K +   + +   KA S + T+  LMD+YFK+G+  + L L ++M + 
Sbjct: 515 WGLCSLEKI-EAAKVVMNEMKECGIKANSLIYTT--LMDAYFKSGNPTEGLHLLDEMKEL 571

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLDE 349
           +I+  +V + VLI+G C N  +S A  YF ++    G   +   +  +++ LCK  +++ 
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A+  +  + + G+ PD+ +Y +++ G    G++++A      M E  +  +   +  ++ 
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 691

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           G   C  L  A S  + M+  G+  +     +++      G I +A  L+  ++
Sbjct: 692 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLM 745



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 125/278 (44%), Gaps = 7/278 (2%)

Query: 85  AVFNAL--DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRR 142
           A +NAL    +  +N+DR   + +    R  ++ D   +   I  LC   KI  A  +  
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGR-GIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M + G   + L +  L++   K G+  +  H++ EM E+       T+   I G C+  
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591

Query: 203 ELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            + KA+  F+ ++N+ G++ N      ++  LCK   +  A     +++         D 
Sbjct: 592 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG---LVPDR 648

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
              T LMD  FK G+  +ALAL + M +  ++ D++AY  L+ G      +  A ++  +
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEE 708

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           M+  G  PD +   ++L    + G +DEA      L K
Sbjct: 709 MIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 215/477 (45%), Gaps = 74/477 (15%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
            +M +KG  P V+T+   ++ LC++G +E A + I+++       N   YNA I G+C+ 
Sbjct: 214 EEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQK 273

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCK-------------------------- 235
              D+AL L   M + GI P+  +++ILV+A C                           
Sbjct: 274 GRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCC 333

Query: 236 ---------KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
                    KGL+ D + F  E+ A        D+I+ + L+  + K  +   A  L ++
Sbjct: 334 TSVLMGLRTKGLVNDCLNFFHELSAKG---YKHDLISYSTLIHGFLKGHNVKSANNLVHE 390

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +  +  D + Y  LI  +C  G +  A   F  ML+ G  PD+IT N +++  C +G+
Sbjct: 391 MRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQ 450

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
            +EA  +   +    + P+  +Y  II  LC +  + KA E L  M + ++ P    +  
Sbjct: 451 FEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTT 510

Query: 407 IIDGYGR-------------------C-----------------GDLSNAFSIRDLMLSF 430
           I+DGY +                   C                 G +S A ++   M   
Sbjct: 511 IMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEE 570

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+S + F F A+I    R G++  A+S+ K+M  + + P+V TY  L+   C L  + +A
Sbjct: 571 GLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMA 630

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             L D+M R  +TPD+ TYT LI G+    N+  A EVF +++  G   DHI +  L
Sbjct: 631 TMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTL 687



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 188/426 (44%), Gaps = 39/426 (9%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I+  C  G+   AL L  +M  +G  PD+ +++ LVN  C  GD+E   ++I+EM   
Sbjct: 265 ALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHC 324

Query: 183 RPSPN--CAT---------------------------------YNAFITGYCRVNELDKA 207
              P   C T                                 Y+  I G+ + + +  A
Sbjct: 325 NKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSA 384

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
            +L   M  NG+ P+ + +  L+   C+KG L +A+K    +L D       D+IT   +
Sbjct: 385 NNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDG---LQPDIITCNHI 441

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D Y   G   +AL   N M  +NI  +   Y+V+IN  C    +  A+     M K   
Sbjct: 442 VDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNI 501

Query: 328 LPDVITYNTLLNCLCKQGKLD-EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            P VI Y T+++   KQ K   +A   Y  + K G  PD ++   ++      G + KA 
Sbjct: 502 FPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKAL 561

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
                M E+ +  +   +  IIDGY R G++  A+S+   M    V+ NV T+  L+   
Sbjct: 562 NLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGF 621

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            +   +  A  L  +M  + + PDV TY  LI     + +I  A +++DEM ++G  PD 
Sbjct: 622 CKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDH 681

Query: 507 ITYTEL 512
           I Y  L
Sbjct: 682 IAYLTL 687



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 214/449 (47%), Gaps = 9/449 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG-----DLEKADHVIRE 178
           +++ L  G K+     L   +   G  P+V T+  ++N  CK       D+E+A  ++ E
Sbjct: 156 LLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEE 215

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M E   +P   TY  +I G CRV  ++ A +    + ++    N   +N L+   C+KG 
Sbjct: 216 MEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGR 275

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
             +A+K L E+   D+G  + D+ + +IL++++   GD    + L  +M   N +  +V 
Sbjct: 276 PDEALKLLEEM--KDEG-ISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVC 332

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
              ++ G    G ++    +F ++  +G+  D+I+Y+TL++   K   +  A++    + 
Sbjct: 333 CTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMR 392

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           K G+ PD I Y ++I+  C  G + +A +   +ML+  + P+    N I+D Y   G   
Sbjct: 393 KNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFE 452

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A    + M    +  N +T++ +I    +  ++  A+ +   M  D IFP V  Y  ++
Sbjct: 453 EALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIM 512

Query: 479 -GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            G +    +   A +LY +M + G  PD +T T L+     RG M +A  +F ++   GL
Sbjct: 513 DGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGL 572

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQK 566
           + D   F  +   Y R+    +A  +++K
Sbjct: 573 SRDEFAFTAIIDGYCRVGNVKRAWSMYKK 601



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 147/300 (49%), Gaps = 8/300 (2%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MR  G     L  DY  ++++IR+ C  G +  AL     M+Q G  PD++T N++V++ 
Sbjct: 391 MRKNG-----LVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQY 445

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           C  G  E+A   I +M +    PN  TY+  I   C+   ++KA  +   M  + I P+ 
Sbjct: 446 CSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSV 505

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           + +  ++    K+    + +K               D +T T+L+D + K G   +AL L
Sbjct: 506 IHYTTIMDGYAKQ--FKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNL 563

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           + +M ++ +  D  A+  +I+G+C  G++  A++ + +M +    P+V TY  L++  CK
Sbjct: 564 FKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCK 623

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
             +LD A+     + +  V PD  +Y  +I G     +I +A E    M +K  +P+ HI
Sbjct: 624 LKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPD-HI 682



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 141/316 (44%), Gaps = 4/316 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I     G  + +A  L  +M + G VPD + +  L+ E C+ G L++A    
Sbjct: 364 DLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNF 423

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M +    P+  T N  +  YC   + ++AL   + M +  I PN  T++++++ LCK 
Sbjct: 424 YTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKY 483

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN-GDKFQALALWNDMFQKNIQTD 295
             +  A + L  +  D+       VI  T +MD Y K   +  +A  L+  M +   + D
Sbjct: 484 QAVEKAWEVLPVMFKDN---IFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPD 540

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
            V   VL++ F   G +S A   F +M + G   D   +  +++  C+ G +  A   Y 
Sbjct: 541 NVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYK 600

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + +  V P+  +Y  ++ G C    +  A   +  M   SV P+   +  +I GY R  
Sbjct: 601 KMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIE 660

Query: 416 DLSNAFSIRDLMLSFG 431
           ++  A+ + D M   G
Sbjct: 661 NIDRAYEVFDEMKKKG 676



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 132/295 (44%), Gaps = 42/295 (14%)

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           ++LI  F  N  ++ A   F Q  K G   ++ + N LL CL +  KL+     +  L  
Sbjct: 119 SLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKN 178

Query: 360 TGVAPDQISYKTIIQGLCI--HG---DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
           +G +P+  +Y  +I   C   HG   D+ +A   L  M EK   P    + V I G  R 
Sbjct: 179 SGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRV 238

Query: 415 GDLSNAFS-IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
           G + +A++ I+DL  S     N++ +NALI    + G   +A  L +EM  +GI PD+++
Sbjct: 239 GSIEDAWNKIQDLR-SSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYS 297

Query: 474 YNLLIGASCNLGHIHLALQLYDEM------------------LR---------------- 499
           Y++L+ A C  G I   + L  EM                  LR                
Sbjct: 298 YSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELS 357

Query: 500 -RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
            +G   D+I+Y+ LI G     N+K A  +  +++  GL  D+I +  L + Y R
Sbjct: 358 AKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCR 412



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 5/133 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + + L+  K M + G     L  D     A+I   C  G +  A  + +KM +    P+V
Sbjct: 557 MSKALNLFKEMAEEG-----LSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNV 611

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+  LV+  CK+  L+ A  +I +M     +P+  TY A I GY R+  +D+A  +F  
Sbjct: 612 KTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDE 671

Query: 214 MANNGIRPNRVTH 226
           M   G  P+ + +
Sbjct: 672 MKKKGTLPDHIAY 684


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 143/533 (26%), Positives = 233/533 (43%), Gaps = 65/533 (12%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRH---------VAVIRDLCLGGKIGTALWLRRKMIQKG 148
           L++ +     G V   L   Y RH         +A ++DL     + T   L   M    
Sbjct: 160 LEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTD 219

Query: 149 TVPDVL-------------THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
            + DV              T + L++ LC+   LE A   + + +++   P+  + N  +
Sbjct: 220 IMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIM 278

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
           + +C+V  +D A   F  M  NG+  +  ++NIL+H LC  G + +A+ F      DD  
Sbjct: 279 SKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF-----TDDME 333

Query: 256 K--ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
           K     DV+T   L   +   G    A  +   M  + +  D+V Y  LI G C  G+I 
Sbjct: 334 KHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIE 393

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A     + L RGF  +VI YN LL+CLCK G+++EA   +  +    + PD I Y  +I
Sbjct: 394 EALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILI 453

Query: 374 QGLCIHGDIVKA-------------------REFLLSMLEKSVVPEPH------------ 402
            GLC  G + +A                   R  LL + +   + E              
Sbjct: 454 HGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLM 513

Query: 403 ----IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
               ++N++IDGY R   ++ A  +   M+  G++ +V TFN LI    R G + +A  +
Sbjct: 514 EDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKM 573

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            + + L G+ P V TY  L+ A C +G++        EM    + P  +TYT LIKG C 
Sbjct: 574 LEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCR 633

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           +  M E+ ++   +   GL  D + +  + + + + KE  KA  ++   LL N
Sbjct: 634 QNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHN 686



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 212/427 (49%), Gaps = 3/427 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  + +   L G +  A  + +KM+ +G  PD++T+  L+   C++G++E+A 
Sbjct: 337 VEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEAL 396

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + +E        N   YN  ++  C+V  +++AL LF  M    + P+ + ++IL+H L
Sbjct: 397 KLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGL 456

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G +  A +   ++      K         +L+   FKNG+  +A   ++   + ++ 
Sbjct: 457 CKEGFVQRAYQLYEQMRLKR--KFPHHFAQRAVLL-GLFKNGNISEARNYFDTWTRMDLM 513

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+V YN++I+G+     I+ A   + +M++RG  P V+T+NTL+N  C++G L EA   
Sbjct: 514 EDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKM 573

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             V+   G+ P  ++Y T++   C  G++ +   FL  M   +VVP    + V+I G  R
Sbjct: 574 LEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCR 633

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              +  +  + + M + G+  +  T+N +I    +G  I  A  L   MLL    P   T
Sbjct: 634 QNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVT 693

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y +LI A C  G +    ++   +  R IT    TY  +IK HCA+G + +A   F ++ 
Sbjct: 694 YKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQML 753

Query: 534 TLGLAID 540
             G  I 
Sbjct: 754 AKGFVIS 760



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 201/427 (47%), Gaps = 3/427 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I   C  G I  AL LR++ + +G   +V+ +N L++ LCK+G +E+A 
Sbjct: 372 LNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEAL 431

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM  +R  P+   Y+  I G C+   + +A  L+  M      P+      ++  L
Sbjct: 432 TLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGL 491

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K G + +A  +       D      DV+   I++D Y +     +A+ L+  M ++ I 
Sbjct: 492 FKNGNISEARNYFDTWTRMD---LMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGIT 548

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             +V +N LINGFC  GD+  A      +  +G +P V+TY TL+N  C+ G + E  HF
Sbjct: 549 PSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHF 608

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +    V P  ++Y  +I+GLC    + ++ + L  M  K ++P+   +N II  + +
Sbjct: 609 LHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCK 668

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             +++ A  + ++ML         T+  LI A    G + D   +   +    I     T
Sbjct: 669 GKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXT 728

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  +I A C  G +  AL  +++ML +G    I  Y+ +I   C RG + EA+  F  + 
Sbjct: 729 YMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMML 788

Query: 534 TLGLAID 540
           + G+  D
Sbjct: 789 SEGVTPD 795



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 203/437 (46%), Gaps = 3/437 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC+ G +  AL     M + G  PDV+T+N L      +G +  A  V+++M    
Sbjct: 312 LLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQG 371

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  TY   I G+C++  +++AL L     + G + N + +N+L+  LCK G + +A+
Sbjct: 372 LNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEAL 431

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+   +  +   D I  +IL+    K G   +A  L+  M  K       A   ++
Sbjct: 432 TLFDEM---ETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVL 488

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G   NG+IS A  YF    +   + DV+ YN +++   +   + EA   Y  + + G+ 
Sbjct: 489 LGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGIT 548

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P  +++ T+I G C  GD+++AR+ L  +  K +VP    +  +++ Y   G++   F  
Sbjct: 549 PSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHF 608

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M +  V     T+  LI    R   + ++  L + M   G+ PD  TYN +I   C 
Sbjct: 609 LHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCK 668

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              I  ALQLY+ ML     P  +TY  LI   C  G++K+ + +   I+   + +    
Sbjct: 669 GKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXT 728

Query: 544 FRILKKRYRRMKESDKA 560
           +  + K +    +  KA
Sbjct: 729 YMTIIKAHCAKGQVSKA 745



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 177/373 (47%), Gaps = 11/373 (2%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
            D ++T+R        LE D+  +  +I  LC  G +  A  L  +M  K   P      
Sbjct: 434 FDEMETLR--------LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQR 485

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            ++  L K G++ +A +     + M    +   YN  I GY R++ + +A+ L+  M   
Sbjct: 486 AVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIER 545

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           GI P+ VT N L++  C++G L +A K L EV+          V+T T LM++Y + G+ 
Sbjct: 546 GITPSVVTFNTLINGFCRRGDLMEARKML-EVIRLKG--LVPSVVTYTTLMNAYCEVGNM 602

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +     ++M    +    V Y VLI G C    +  +      M  +G LPD +TYNT+
Sbjct: 603 QEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTI 662

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           + C CK  ++ +A   Y ++      P Q++YK +I  LCI GD+      ++S+ ++++
Sbjct: 663 IQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNI 722

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
             +   +  II  +   G +S A    + ML+ G   ++  ++A+I    + G I +A  
Sbjct: 723 TLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKY 782

Query: 458 LKKEMLLDGIFPD 470
               ML +G+ PD
Sbjct: 783 FFVMMLSEGVTPD 795



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 142/302 (47%), Gaps = 3/302 (0%)

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           I  A+ L  KMI++G  P V+T N L+N  C+ GDL +A  ++  +      P+  TY  
Sbjct: 532 IAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTT 591

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            +  YC V  + +  H    M  N + P  VT+ +L+  LC++  + ++++ L  + A  
Sbjct: 592 LMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKG 651

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
                 D +T   ++  + K  +  +AL L+N M   N     V Y VLIN  C+ GD+ 
Sbjct: 652 ---LLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLK 708

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
                   +  R       TY T++   C +G++ +A  ++  +   G       Y  +I
Sbjct: 709 DVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVI 768

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
             LC  G I +A+ F + ML + V P+P I   +++ + + G+ S+ F    +++  G  
Sbjct: 769 NRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGFI 828

Query: 434 SN 435
           S+
Sbjct: 829 SH 830


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 212/470 (45%), Gaps = 42/470 (8%)

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           R LC  G+   AL L R M + G VPD + +  +++ LC  G + +A  ++ EM  M  +
Sbjct: 167 RALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCA 226

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
            +  T++  + G C +  + +A  L   M   G  P  +T+  L+  LC+     +A   
Sbjct: 227 ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAM 286

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           LG V          +V+    ++      G   +A  L+  M  K  Q D   Y++L++G
Sbjct: 287 LGRV-------PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHG 339

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITY------------------------------- 334
            C  G I SA     +M K+GF P+V+TY                               
Sbjct: 340 LCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLN 399

Query: 335 ----NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
               N ++  LCK G++DEA      +   G  PD  SY TII  LC +  + +A     
Sbjct: 400 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE 459

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
           ++LE+ VV     +N II    R G   +A  +   M+  G S +V ++N LI A  + G
Sbjct: 460 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG 519

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           ++  +  L +EM   GI P+  +YN+LI   C    +  AL+L  +ML +G+ PDI+TY 
Sbjct: 520 NVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 579

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            LI G C  G M  A  +  K+    +  D I + IL   + +++  D A
Sbjct: 580 TLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 629



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 148/298 (49%), Gaps = 38/298 (12%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT------------------- 155
           + D   +  ++  LC  G+IG+A+ L R+M +KG  P+V+T                   
Sbjct: 327 QPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 386

Query: 156 ----------------HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
                           +N ++  LCK G +++A  +I+EM     +P+  +YN  I   C
Sbjct: 387 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 446

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
              ++++A H+F  +   G+  N +T+N ++HAL + G   DAV+   E++       + 
Sbjct: 447 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG---CSL 503

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DV++   L+ +  K+G+  ++L L  +M +K I+ + V+YN+LI+  C    +  A    
Sbjct: 504 DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELS 563

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            QML +G  PD++TYNTL+N LCK G +  A +    L    V PD I+Y  +I   C
Sbjct: 564 KQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHC 621



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 167/367 (45%), Gaps = 7/367 (1%)

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R  P   T+       CR+   D+AL L   MA +G  P+ V +  ++HALC +G + +A
Sbjct: 154 RVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEA 213

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E+L        +DV T   ++      G   +A  L + M  K     ++ Y  L
Sbjct: 214 ATLLNEMLLMG---CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFL 270

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + G C       A A    ML R    +V+ +NT++     +GKL EA+  Y  +   G 
Sbjct: 271 LQGLCRVRQADEARA----MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGC 326

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  +Y  ++ GLC  G I  A   L  M +K   P    + +++  + + G   +  +
Sbjct: 327 QPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 386

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M + G++ N   +N +I A  + G + +A  L +EM   G  PD+ +YN +I   C
Sbjct: 387 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 446

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           N   +  A  +++ +L  G+  + ITY  +I      G  ++A  +  ++   G ++D +
Sbjct: 447 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 506

Query: 543 PFRILKK 549
            +  L K
Sbjct: 507 SYNGLIK 513



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 5/265 (1%)

Query: 277 KFQALALWNDMFQKN-IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
           + +  AL+  M  ++ +      + V     C  G    A A    M + G +PD + Y 
Sbjct: 139 RARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQ 198

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           T+++ LC QG + EA+     +   G A D  ++  +++G+C  G + +A   +  M+ K
Sbjct: 199 TVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTK 258

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
             +P    +  ++ G  R      A +    ML      NV  FN +I      G + +A
Sbjct: 259 GCMPGVMTYGFLLQGLCRVRQADEARA----MLGRVPELNVVLFNTVIGGCLAEGKLAEA 314

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             L + M L G  PD  TY++L+   C LG I  A++L  EM ++G  P+++TYT ++  
Sbjct: 315 TELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHS 374

Query: 516 HCARGNMKEAEEVFAKIQTLGLAID 540
            C  G   +   +  ++   GL ++
Sbjct: 375 FCKNGMWDDTRALLEEMSAKGLTLN 399



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 9/173 (5%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           C+L  D   +  +I+ +C  G +  +L L  +M +KG  P+ +++N L++ELCK   +  
Sbjct: 501 CSL--DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRD 558

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A  + ++M     +P+  TYN  I G C++  +  AL+L   + N  + P+ +T+NIL+ 
Sbjct: 559 ALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 618

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK-----NGDKFQ 279
             CK  LL DA   L   +A        D     IL D  FK      GD FQ
Sbjct: 619 WHCKVRLLDDAAMLLNRAMAAV--CPVGDRRIMQILPDKNFKLYLHTKGDDFQ 669



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 3/164 (1%)

Query: 379 HGDIVKAREFLL--SMLEK-SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            G + +AR F L   M+ +  V P    + V      R G    A ++   M   G   +
Sbjct: 134 QGGLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPD 193

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
              +  +I A    G + +A +L  EMLL G   DV T++ ++   C LG +  A +L D
Sbjct: 194 AVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVD 253

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
            M+ +G  P ++TY  L++G C      EA  +  ++  L + +
Sbjct: 254 RMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVL 297



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 65/132 (49%)

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           V    FTF     A  R G   +A +L + M   G  PD   Y  +I A C+ G +  A 
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            L +EML  G   D+ T+ ++++G C  G ++EA  +  ++ T G     + +  L +  
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274

Query: 552 RRMKESDKARDI 563
            R++++D+AR +
Sbjct: 275 CRVRQADEARAM 286


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 230/506 (45%), Gaps = 12/506 (2%)

Query: 71  WFSNKDSDNEGNPQAVFNALDLILKENLDR-----LKTMRDTGPVRCTLETDYRRHVAVI 125
           +++++      +P   +  LD++ K  L +     L+ M   G + C  E      V+  
Sbjct: 188 YWADRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRG-IECPPEAFGYVMVSYS 246

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           R     GK+  AL +   M + G  P +   N  +  L K G LEKA   +  M      
Sbjct: 247 R----AGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIK 302

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  TYN+ I GYC +N ++ AL L + + + G  P++V++  ++  LCK+  + + VK 
Sbjct: 303 PDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKI-EEVKC 361

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L E +  +      D +T   L+    K+G    ALA   +   K    D V Y+ +++ 
Sbjct: 362 LMEKMVWNSN-LIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHS 420

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           FC  G +  A +    M  RG  PDV+TY  +++  C+ G++DEA      + K G  P+
Sbjct: 421 FCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPN 480

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            +SY  ++ GLC  G  ++ARE +    E    P    +  ++ G  R G LS A  +  
Sbjct: 481 TVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTR 540

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M+  G        N LI +  +   + +A    +E L  G   +V  +  +I   C +G
Sbjct: 541 EMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIG 600

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  AL + D+M   G  PD +TYT L      +G + EA E+  K+ + GL    + +R
Sbjct: 601 DMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYR 660

Query: 546 ILKKRYRRMKESDKARDIHQKWLLRN 571
            +  RY +    D   ++ +K L R 
Sbjct: 661 SVIHRYSQWGRVDDMLNLLEKMLKRQ 686



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 213/480 (44%), Gaps = 41/480 (8%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           L  GGK+  AL    +M   G  PD++T+N L+   C +  +E A  +I  +      P+
Sbjct: 280 LVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPD 339

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMA-NNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
             +Y   +   C+  ++++   L   M  N+ + P++VT+N L+H L K G   DA+ FL
Sbjct: 340 KVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFL 399

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            E  A D G     V  S I+  S+ + G   +A +L  DM+ +    D+V Y  +++GF
Sbjct: 400 KE--AQDKGFHIDKVGYSAIV-HSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGF 456

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C  G I  A     QM K G  P+ ++Y  LLN LC  GK  EA     V  +    P+ 
Sbjct: 457 CRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNA 516

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV-------------------- 406
           I+Y  ++ GL   G + +A +    M+EK   P P   N+                    
Sbjct: 517 ITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEE 576

Query: 407 ---------------IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
                          +I G+ + GD+  A S+ D M   G   +  T+ AL  A  + G 
Sbjct: 577 CLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGR 636

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + +A  L  +ML  G+ P   TY  +I      G +   L L ++ML+R   P    Y +
Sbjct: 637 LDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVYNQ 694

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           +I+  C  GN++EAE++  K+      +D     +L + Y +   +  A  +  +   RN
Sbjct: 695 VIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRN 754



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/454 (22%), Positives = 205/454 (45%), Gaps = 6/454 (1%)

Query: 85  AVFNALDLILKEN-LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRK 143
           + +  +  + KE  ++ +K + +       L  D   +  +I  L   G    AL   ++
Sbjct: 342 SYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKE 401

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
              KG   D + ++ +V+  C+ G +++A  ++ +M     +P+  TY A + G+CR+  
Sbjct: 402 AQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGR 461

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D+A  +   M  +G +PN V++  L++ LC  G   +A + +      ++   T + IT
Sbjct: 462 IDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMIN---VSEEHWWTPNAIT 518

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              +M    + G   +A  L  +M +K      V  N+LI   C N  +  A  Y  + L
Sbjct: 519 YGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECL 578

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            +G   +V+ + T+++  C+ G ++ A      +  +G  PD ++Y  +   L   G + 
Sbjct: 579 NKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLD 638

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A E ++ ML K + P P  +  +I  Y + G + +  ++ + ML       V  +N +I
Sbjct: 639 EAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQPFRTV--YNQVI 696

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                 G++ +A  L  ++L      D  T ++L+ +    G    A ++   M RR +T
Sbjct: 697 EKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLT 756

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           PD+    ++ K     G + EA+ +  +    G+
Sbjct: 757 PDLKLCEKVSKKLVLDGKLVEADNLMLRFVERGI 790


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 197/402 (49%), Gaps = 3/402 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+  G  P++ T N ++  LC  G +++A+ ++  +      P+  TY + I G+C+  
Sbjct: 192 EMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNG 251

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            LD A  +F  M  +G  PN VT++ L++ LC +G L +A+  L E++   D      V 
Sbjct: 252 NLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMI---DKGIEPTVH 308

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             TI + S    G   +A+ L   M ++    ++  Y  LI+G   +G    A   + +M
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKM 368

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L  G +P  +TY+ L+N L  +G+ + A   +  +      P+  +Y  II+G C  G I
Sbjct: 369 LADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYI 428

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA      ML+    P    +N+II  Y + G ++NA  + ++M   G+  + +T+  L
Sbjct: 429 QKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANL 488

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I   +RGG +  AFSL  EM+  GI P+V TYN +I     +  +  AL L+ +M+  G 
Sbjct: 489 ISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGN 548

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            P   TY  +I G      + EAE    K+   GL  + I +
Sbjct: 549 VPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITY 590



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 197/411 (47%), Gaps = 3/411 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I+ LC  GK+  A  +   +   G  PD  T+  L+   CK G+L+ A  +   M + 
Sbjct: 207 AMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKD 266

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY+A I G C    L++A+ +   M + GI P    + I + +LC  G   +A
Sbjct: 267 GCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEA 326

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           VK LG++     G    +V T T L+    ++G    A+ +++ M    +    V Y+ L
Sbjct: 327 VKLLGKMKKRGCG---PNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSAL 383

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           IN   + G   +A   F  ML    LP+  TYN ++   C  G + +A+  +  + K G 
Sbjct: 384 INQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGP 443

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           +P+ I+Y  II      G +  A   L  M    +  +   +  +I G+ R G L +AFS
Sbjct: 444 SPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFS 503

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M+  G+S NV T+NA+I        + DA +L  +M+  G  P   TYN++I    
Sbjct: 504 LFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFS 563

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
               I  A     +M+++G+ P++ITYT  I G C  G    A ++F +++
Sbjct: 564 KTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMK 614



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 206/444 (46%), Gaps = 12/444 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L+E +D L+ M D G     +E     +   I  LC  G+   A+ L  KM ++G  P+V
Sbjct: 288 LEEAMDMLEEMIDKG-----IEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNV 342

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+  L++ L + G  E A  V  +M      P   TY+A I         + AL +F  
Sbjct: 343 QTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEW 402

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M ++   PN  T+N+++   C  G +  A     ++L       + +VIT  I++  YFK
Sbjct: 403 MLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQML---KAGPSPNVITYNIIIHIYFK 459

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G    A+ L   M    ++ D   Y  LI+GF   G +  AF+ F +M++ G  P+V+T
Sbjct: 460 QGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVT 519

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN ++N      K+D+A   +  + ++G  P   +Y  +I G      I +A  F   M+
Sbjct: 520 YNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMV 579

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           ++ ++P    +   IDG  + G  S AF I   M       N+ T+++LI    + G   
Sbjct: 580 KQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAE 639

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           DA    + +L DG  P+V TY  L+   C  G  + A QL + M ++G+ P    Y  L+
Sbjct: 640 DA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALL 695

Query: 514 KGHCARGNMKEAEEVFAKIQTLGL 537
            G C    ++ A ++F  + T G 
Sbjct: 696 VGQCKNLEVESALKIFDSMVTTGF 719



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 201/443 (45%), Gaps = 42/443 (9%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  L + G+  TAL +   M+   ++P+  T+N ++   C IG ++KA  +  +M 
Sbjct: 380 YSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQML 439

Query: 181 EMRPSPNCATYNA-----------------------------------FITGYCRVNELD 205
           +  PSPN  TYN                                     I+G+ R  +L+
Sbjct: 440 KAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLE 499

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
            A  LF+ M  +GI PN VT+N +++       + DA+    +++   +  ++    T  
Sbjct: 500 HAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSG---TYN 556

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           +++  + K     +A      M ++ +  +++ Y   I+G C NG  S AF  F +M KR
Sbjct: 557 MMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKR 616

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
            + P++ TY++L++ LC++G+ ++A      L   G  P+  +Y T+++GLC  G   +A
Sbjct: 617 DYFPNLCTYSSLIDGLCQEGQAEDAER----LLDDGCEPNVDTYTTLVRGLCGKGRCYEA 672

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            + + SM +K + P   I+  ++ G  +  ++ +A  I D M++ G    +  + ALI A
Sbjct: 673 DQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICA 732

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             +      A  + + ML      D   + +L+      G   L+L+L   M  R  T +
Sbjct: 733 LCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLN 792

Query: 506 IITYTELIKGHCARGNMKEAEEV 528
             T   L +   A G   E  ++
Sbjct: 793 FQTRVMLARELSALGCSIEIPQI 815



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 164/362 (45%), Gaps = 38/362 (10%)

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           ++  M N+GIRPN  T N ++  LC KG + +A   +G +       A  D  T T L+ 
Sbjct: 189 VYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIF---HYGACPDTFTYTSLII 245

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF------------- 316
            + KNG+   A  +++ M +     + V Y+ LING C  G +  A              
Sbjct: 246 GHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEP 305

Query: 317 ---AY------FC-------------QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
              AY       C             +M KRG  P+V TY  L++ L + GK + A   Y
Sbjct: 306 TVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVY 365

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G+ P  ++Y  +I  L + G    A      ML    +P    +NVII G+   
Sbjct: 366 HKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSI 425

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G +  A +I D ML  G S NV T+N +I    + G + +A  L + M  +G+  D +TY
Sbjct: 426 GYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTY 485

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
             LI      G +  A  L++EM+  GI+P+++TY  +I G+     + +A  +F K+  
Sbjct: 486 ANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVE 545

Query: 535 LG 536
            G
Sbjct: 546 SG 547



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 125/269 (46%)

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           ++ +M    I+ ++  +N +I   C  G +  A      +   G  PD  TY +L+   C
Sbjct: 189 VYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHC 248

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K G LD A   +  + K G  P+ ++Y  +I GLC  G + +A + L  M++K + P  H
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVH 308

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            + + I      G    A  +   M   G   NV T+ ALI   +R G    A  +  +M
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKM 368

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           L DG+ P   TY+ LI      G    AL +++ ML     P+  TY  +IKG C+ G +
Sbjct: 369 LADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYI 428

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           ++A  +F ++   G + + I + I+   Y
Sbjct: 429 QKATAIFDQMLKAGPSPNVITYNIIIHIY 457



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 149/338 (44%), Gaps = 12/338 (3%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+ M+  G     L+ D   +  +I     GGK+  A  L  +M++ G  P+V+T+N ++
Sbjct: 470 LEMMKGNG-----LKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAII 524

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           N    +  ++ A  +  +M E    P+  TYN  I+G+ + N + +A +    M   G+ 
Sbjct: 525 NGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLL 584

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           PN +T+   +  LCK G    A K   E+   D      ++ T + L+D   + G    A
Sbjct: 585 PNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRD---YFPNLCTYSSLIDGLCQEGQAEDA 641

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
             L +D  + N+ T    Y  L+ G C  G    A      M K+G  P    Y  LL  
Sbjct: 642 ERLLDDGCEPNVDT----YTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVG 697

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
            CK  +++ A   +  +  TG  P    YK +I  LC      KA+    +ML+K    +
Sbjct: 698 QCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSD 757

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
             +W V++DG  + G+   +  +  +M S   + N  T
Sbjct: 758 EVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQT 795



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 84/184 (45%)

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
            R+  + ML   + P    +N +I      G +  A  I   +  +G   + FT+ +LI+
Sbjct: 186 GRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLII 245

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              + G++  AF +   M+ DG  P+  TY+ LI   C+ G +  A+ + +EM+ +GI P
Sbjct: 246 GHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEP 305

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
            +  YT  I   C  G   EA ++  K++  G   +   +  L     R  + + A  ++
Sbjct: 306 TVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVY 365

Query: 565 QKWL 568
            K L
Sbjct: 366 HKML 369


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 213/419 (50%), Gaps = 6/419 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  +C  G + TA  L  +M Q G  PD++T+N L++   K+G L+++  +  EM ++ 
Sbjct: 258 MIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVG 317

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYNA I  +C+  ++ KA H    M N+G++PN VT++ L+ ALCK+ +L  A+
Sbjct: 318 CEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAI 377

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           KFL   L       + +  T T L+D+  K G    AL L ++M Q  +  ++V Y  L+
Sbjct: 378 KFL---LDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLL 434

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G +  A   F  M+K G  P++ TY  L++   K  +++ A      + +  + 
Sbjct: 435 DGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIK 494

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           PD + Y TII GLC    + +  EF++S ++   +     I+ + +D Y + G    A +
Sbjct: 495 PDLLLYGTIIWGLCSQNKLEEC-EFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALN 553

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD-VFTYNLLIGAS 481
           +   M   GV   + TF  LI    + G + +A      M    + P+ V     LI   
Sbjct: 554 LLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGL 613

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           C   +I  A +L+DEM  + + PD I YT LI G+    + +EA  + +++  LG+ +D
Sbjct: 614 CKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELD 672



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 203/441 (46%), Gaps = 42/441 (9%)

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           R +  G  +   LW  R +     VP     + L +   ++G LE+A      M+  R  
Sbjct: 159 RRILPGFDVFEVLWSTRNV----CVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVF 214

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P   + NAF+    +  + D +   F  M   GI  +  T+NI++  +CK+         
Sbjct: 215 PKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKE--------- 265

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
                                        GD   A +L++ M Q  +  DIV YN LI+G
Sbjct: 266 -----------------------------GDMVTAKSLFHQMKQMGLTPDIVTYNSLIDG 296

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           +   G +  +F  F +M   G  PDVITYN L+NC CK  ++ +A HF   +  +G+ P+
Sbjct: 297 YGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPN 356

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++Y T+I  LC    + +A +FLL M    + P    +  +ID   + G LS+A  + D
Sbjct: 357 VVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLAD 416

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            ML   V  NV T+  L+    + G + +A  L + M+  G+ P++ TY  L+       
Sbjct: 417 EMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNK 476

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  AL+L  E+  + I PD++ Y  +I G C++  ++E E V ++++  G+  + + + 
Sbjct: 477 RVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYT 536

Query: 546 ILKKRYRRMKESDKARDIHQK 566
           I    Y +  ++ +A ++ Q+
Sbjct: 537 IRMDAYFKTGKTVEALNLLQE 557



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 191/409 (46%), Gaps = 44/409 (10%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +L++ +  L  MR  G     L  +   + ++I   C  G +  AL L  +M+Q     +
Sbjct: 372 MLQQAIKFLLDMRRVG-----LSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFN 426

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V+T+  L++ LCK G + +A+ + R M +   +PN  TY A + G+ +   ++ AL L  
Sbjct: 427 VVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLK 486

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            +    I+P+ + +  ++  LC +  L +    + E+ A       ++ +  TI MD+YF
Sbjct: 487 EIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKA---CGIRANSVIYTIRMDAYF 543

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G   +AL L  +M    ++  IV + VLI+G                           
Sbjct: 544 KTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDG--------------------------- 576

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT-IIQGLCIHGDIVKAREFLLS 391
                   LCK+G ++EA  ++  ++   + P+ ++  T +I GLC +  I  A++    
Sbjct: 577 --------LCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDE 628

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M +K++VP+   +  +IDG  +  D   A +IR  M   G+  ++  + +L+   ++G  
Sbjct: 629 MQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNL 688

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           +  A     EM+  GI PD      L+     LG I  A++L+DE+L++
Sbjct: 689 VQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLKK 737



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 12/271 (4%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD+L +  ++  LC    LE+ + V+ EM       N   Y   +  Y +  +  +AL+L
Sbjct: 495 PDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNL 554

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M + G+    VT  +L+  LCKKGL+ +A+ +   +   D     ++V   T L+D 
Sbjct: 555 LQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARM--ADFNLQPNNVAVCTALIDG 612

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             KN     A  L+++M  KN+  D +AY  LI+G   + D   A     +M + G   D
Sbjct: 613 LCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELD 672

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI----------SYKTIIQGLCIHG 380
           +  Y +L+  L +   + +A  F   +   G+ PD+I             +I + + +H 
Sbjct: 673 LHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHD 732

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
           +++K       + E++++PE  +     DGY
Sbjct: 733 ELLKKVPLDELLEEQNLMPEKILRCRDGDGY 763



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 12/212 (5%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN-CAT 190
           GK   AL L ++M   G    ++T   L++ LCK G +E+A      M++    PN  A 
Sbjct: 546 GKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAV 605

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF---LG 247
             A I G C+ N ++ A  LF  M +  + P+++ +  L+    K     +A+     + 
Sbjct: 606 CTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMS 665

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQ-ALALWNDMFQKNIQTDIVAYNVLINGF 306
           E+  + D  A + ++            G+  Q A    N+M  K I  D +    L+  +
Sbjct: 666 ELGMELDLHAYTSLVWG-------LSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKY 718

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
              G I  A     ++LK+  L +++    L+
Sbjct: 719 YELGSIDEAIELHDELLKKVPLDELLEEQNLM 750


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 230/481 (47%), Gaps = 19/481 (3%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+ +R+   + C  +++   +  V+  L   G+   A  L  +M+ +   PDV+  N LV
Sbjct: 166 LRLLRNMPELGC--DSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLV 223

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL---------HLF 211
           + LCK G + +++ ++ ++ +    PN  T+N F+ G CR   LD+A+            
Sbjct: 224 HVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYL 283

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M N G  P+ +T+N ++   CKKG++ DA + L + +         D  T   L++ +
Sbjct: 284 RKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKG---FKPDEFTYCSLINGF 340

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K+GD  +A+A++ D   K ++  IV YN LI G    G I  A     +M + G LP++
Sbjct: 341 CKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNI 400

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            TYN ++N LCK G + +ASH        G  PD  +Y T+I G C    +  A E +  
Sbjct: 401 WTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNR 460

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M  + + P+   +N +++G  + G       I   M   G + N+ T+N ++ +  +   
Sbjct: 461 MWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKK 520

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR-GITPDIITYT 510
           + +A  L  EM   G+ PDV ++  L    C +G I  A QL+  M ++  +     TY 
Sbjct: 521 VNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYN 580

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            ++     + NM  A ++F+ ++  G   D+  +R++   + +M    +      K+LL 
Sbjct: 581 IIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQG----YKFLLE 636

Query: 571 N 571
           N
Sbjct: 637 N 637



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 207/455 (45%), Gaps = 12/455 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H A++  L   G    A  +  +M  +G   DV T+   +   CK      A  ++R M 
Sbjct: 114 HNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMP 173

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E+    N   Y   + G     E D A  LF  M    + P+ V  N LVH LCKKGL+ 
Sbjct: 174 ELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVF 233

Query: 241 DAVKFLGEVLADDDGKATSDVITSTIL---------MDSYFKNGDKFQALALWNDMFQKN 291
           ++ + LG+VL         ++ T  I          +D   +N    +A      M    
Sbjct: 234 ESERLLGKVLKRG---VCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGG 290

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
            + D + YN +I+G+C  G +  A       + +GF PD  TY +L+N  CK G  D A 
Sbjct: 291 FEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAM 350

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
             +      G+ P  + Y T+I+GL   G I+ A + +  M E   +P    +N++I+G 
Sbjct: 351 AVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGL 410

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            + G +S+A  + D  ++ G   ++FT+N LI    +   +  A  +   M   G+ PDV
Sbjct: 411 CKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDV 470

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TYN L+   C  G     ++++  M  +G TP+IITY  ++   C    + EA ++  +
Sbjct: 471 ITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGE 530

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +++ GL  D + F  L   + ++ + D A  + ++
Sbjct: 531 MKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRR 565



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 206/436 (47%), Gaps = 11/436 (2%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MRD G     +++D   +   I+  C   +   AL L R M + G   + + +  +V  L
Sbjct: 137 MRDRG-----VQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGL 191

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
              G+ + A  +  EM      P+   +N  +   C+   + ++  L   +   G+ PN 
Sbjct: 192 YDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNL 251

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADD------DGKATSDVITSTILMDSYFKNGDK 277
            T NI V  LC++G L  AV+    V A++      +G    D +T   ++D Y K G  
Sbjct: 252 FTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMV 311

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             A  +  D   K  + D   Y  LINGFC +GD   A A F   L +G  P ++ YNTL
Sbjct: 312 QDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTL 371

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +  L +QG +  A      +++ G  P+  +Y  +I GLC  G +  A   +   + K  
Sbjct: 372 IKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGC 431

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P+   +N +IDGY +   L +A  + + M S G++ +V T+N L+    + G   +   
Sbjct: 432 PPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVME 491

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           + K M   G  P++ TYN+++ + C    ++ A+ L  EM  +G+ PD++++  L  G C
Sbjct: 492 IFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFC 551

Query: 518 ARGNMKEAEEVFAKIQ 533
             G++  A ++F +++
Sbjct: 552 KIGDIDGAYQLFRRME 567



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 193/385 (50%), Gaps = 4/385 (1%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           RKM+  G  PD LT+N +++  CK G ++ A+ V+++       P+  TY + I G+C+ 
Sbjct: 284 RKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKD 343

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            + D+A+ +F      G+RP+ V +N L+  L ++GL+  A++ + E+    +     ++
Sbjct: 344 GDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMA---ENGCLPNI 400

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
            T  ++++   K G    A  L +D   K    DI  YN LI+G+C    + SA     +
Sbjct: 401 WTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNR 460

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M  +G  PDVITYNTLLN LCK GK +E    +  + + G  P+ I+Y  I+  LC    
Sbjct: 461 MWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKK 520

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFN 440
           + +A + L  M  K + P+   +  +  G+ + GD+  A+ + R +   + V     T+N
Sbjct: 521 VNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYN 580

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            ++ A +   ++  A  L   M   G  PD +TY ++I   C +G+I    +   E + +
Sbjct: 581 IIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEK 640

Query: 501 GITPDIITYTELIKGHCARGNMKEA 525
              P + T+  ++   C +  + EA
Sbjct: 641 RFIPSLTTFGRVLNCLCVKDKVHEA 665



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 188/395 (47%), Gaps = 4/395 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            E D   + ++I   C  G +  A  + +  + KG  PD  T+  L+N  CK GD ++A 
Sbjct: 291 FEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAM 350

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V ++       P+   YN  I G  +   +  AL L + MA NG  PN  T+N++++ L
Sbjct: 351 AVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGL 410

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G + DA   + + +A        D+ T   L+D Y K      A  + N M+ + + 
Sbjct: 411 CKMGCVSDASHLVDDAIAKG---CPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMT 467

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D++ YN L+NG C  G        F  M ++G  P++ITYN +++ LCK  K++EA   
Sbjct: 468 PDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDL 527

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYG 412
            G +   G+ PD +S+ T+  G C  GDI  A +    M ++  V      +N+I+  + 
Sbjct: 528 LGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFS 587

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
              +++ A  +  +M + G   + +T+  +I    + G+I   +    E +     P + 
Sbjct: 588 EQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLT 647

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           T+  ++   C    +H A+ +   ML++GI P+ +
Sbjct: 648 TFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV 682



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 151/320 (47%), Gaps = 38/320 (11%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC  G +  A  L    I KG  PD+ T+N L++  CK   L+ A  ++  M    
Sbjct: 406 VINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQG 465

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  TYN  + G C+  + ++ + +F  M   G  PN +T+NI+V +LCK   + +AV
Sbjct: 466 MTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAV 525

Query: 244 KFLGEV---------------------LADDDG--------KATSDVITST----ILMDS 270
             LGE+                     + D DG        +   DV  +T    I++ +
Sbjct: 526 DLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSA 585

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + +  +   A+ L++ M       D   Y V+I+GFC  G+I+  + +  + +++ F+P 
Sbjct: 586 FSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPS 645

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           + T+  +LNCLC + K+ EA     ++ + G+ P+ ++  TI +       +V A + L+
Sbjct: 646 LTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVN--TIFEA---DKKVVAAPKILV 700

Query: 391 SMLEKSVVPEPHIWNVIIDG 410
             L K      + + ++ DG
Sbjct: 701 EDLLKKGHIAYYTYELLYDG 720



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/334 (24%), Positives = 142/334 (42%), Gaps = 12/334 (3%)

Query: 206 KALHLF-STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           KAL +F S  + +G +    T+  +V  L   G   +  K L E+  + +          
Sbjct: 22  KALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIE 81

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
              M +Y + G   +A+  +  M   N    + ++N ++N     G  + A   + +M  
Sbjct: 82  A--MKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRD 139

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           RG   DV TY   +   CK  +   A      + + G   + ++Y T++ GL   G+   
Sbjct: 140 RGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDH 199

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           ARE    ML + + P+   +N ++    + G +  +  +   +L  GV  N+FTFN  + 
Sbjct: 200 ARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQ 259

Query: 445 AETRGGS---------IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
              R G+         + +A    ++M+  G  PD  TYN +I   C  G +  A ++  
Sbjct: 260 GLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLK 319

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           + + +G  PD  TY  LI G C  G+   A  VF
Sbjct: 320 DAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVF 353



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 97/251 (38%), Gaps = 50/251 (19%)

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG-- 410
           F    S+ G      +YK I+Q L  HG+  +  + L  M E       ++ N +++G  
Sbjct: 27  FNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRE-------NVNNALLEGAY 79

Query: 411 ------YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
                 YGR G +  A    + M  +    +V + NA++      G    A  +   M  
Sbjct: 80  IEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRD 139

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLAL--------------------------------- 491
            G+  DV+TY + I + C     + AL                                 
Sbjct: 140 RGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDH 199

Query: 492 --QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
             +L+DEML R + PD++ + +L+   C +G + E+E +  K+   G+  +   F I  +
Sbjct: 200 ARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQ 259

Query: 550 RYRRMKESDKA 560
              R    D+A
Sbjct: 260 GLCREGALDRA 270


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 186/371 (50%), Gaps = 6/371 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           ++++ G  P V  +N L+N+ CK G +  A  +  E+ +    P   ++N  I G C+  
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            LD+   L  TM  N I P+  T+++L+H LCK+G L  A +   E+          + I
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEM---QQRGLRPNGI 329

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T T L+D  +++     A+  ++ M    ++ D+V YN L+NG C  GD++ A     +M
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
              G  PD ITY TL++  CK+G L+ A      +++ GV  D +++  +I G C  G +
Sbjct: 390 KMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A   L  M+E  + P+   + ++IDGY + G++   F +   M   G    V T+N L
Sbjct: 450 RDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVL 509

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +    + G + +A  L + ML  G+ PD  TYN+L+   C  G     L+L +E   +G+
Sbjct: 510 MNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGL 566

Query: 503 TPDIITYTELI 513
             D   YT L+
Sbjct: 567 IVDYAYYTSLV 577



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 170/370 (45%), Gaps = 38/370 (10%)

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           E+ E    P    YN  I  +C+   +  A  +F+ +   G+RP  V+ N L++ LCK  
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKS- 271

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
                                              +N D  +   L   M +  I  D+ 
Sbjct: 272 -----------------------------------RNLD--EGFRLKKTMEENRIYPDVF 294

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            Y+VLI+G C  G +  A   F +M +RG  P+ IT+  L++   +  ++D A + Y  +
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQM 354

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
              GV PD + Y T++ GLC  GD+ KAR+ +  M    + P+   +  +IDGY + GDL
Sbjct: 355 LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDL 414

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
            +A  IR  M   GV  +   F ALI    R G + DA    +EM+  G+ PD  TY ++
Sbjct: 415 ESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMV 474

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I   C  G++ +  +L  EM   G  P +ITY  L+ G C +G MK A  +   +  LG+
Sbjct: 475 IDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGV 534

Query: 538 AIDHIPFRIL 547
             D I + IL
Sbjct: 535 TPDDITYNIL 544



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 151/303 (49%), Gaps = 3/303 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC    +     L++ M +    PDV T++ L++ LCK G L+ A+ +  EM + 
Sbjct: 263 TLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  T+ A I G  R   +D A++ +  M   G++P+ V +N L++ LCK G +  A
Sbjct: 323 GLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKA 382

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K + E+          D IT T L+D Y K GD   A+ +   M ++ +  D VA+  L
Sbjct: 383 RKLVDEMKMVG---MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAL 439

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC +G +  A     +M++ G  PD  TY  +++  CK+G +         +   G 
Sbjct: 440 ISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH 499

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  I+Y  ++ GLC  G +  A   L +ML   V P+   +N++++G+ + G   +   
Sbjct: 500 KPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLK 559

Query: 423 IRD 425
           +R+
Sbjct: 560 LRN 562



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 159/322 (49%), Gaps = 3/322 (0%)

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
            +I+   + +KG   D+   +   + D  G   S+ +    LM +Y+ +G    A+  + 
Sbjct: 121 QSIIRFLVSRKG--KDSAASVFAAILDTAGTRCSNFVFDA-LMIAYWDSGFVSDAIQCFR 177

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            +   N Q        L++    +    + + ++ ++L+ GF P V  YN L+N  CK+G
Sbjct: 178 LVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEG 237

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
            + +A   +  + K G+ P  +S+ T+I GLC   ++ +      +M E  + P+   ++
Sbjct: 238 SIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYS 297

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
           V+I G  + G L  A  + D M   G+  N  TF ALI  + R   +  A +   +ML  
Sbjct: 298 VLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTM 357

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G+ PD+  YN L+   C +G ++ A +L DEM   G+ PD ITYT LI G+C  G+++ A
Sbjct: 358 GVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESA 417

Query: 526 EEVFAKIQTLGLAIDHIPFRIL 547
            E+   +   G+ +D++ F  L
Sbjct: 418 MEIRKGMNEEGVVLDNVAFTAL 439



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 133/285 (46%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+D    +         ++++ +      +  YN+LIN FC  G I  A   F ++ KRG
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P  +++NTL+N LCK   LDE       + +  + PD  +Y  +I GLC  G +  A 
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           +    M ++ + P    +  +IDG  R   + +A +    ML+ GV  ++  +N L+   
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G +  A  L  EM + G+ PD  TY  LI   C  G +  A+++   M   G+  D 
Sbjct: 374 CKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDN 433

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           + +T LI G C  G +++AE    ++   G+  D   + ++   Y
Sbjct: 434 VAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGY 478



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 149/297 (50%), Gaps = 6/297 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  LC  G++  A  L  +M Q+G  P+ +T   L++   +   ++ A +  
Sbjct: 292 DVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTY 351

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M  M   P+   YN  + G C+V +++KA  L   M   G++P+++T+  L+   CK+
Sbjct: 352 HQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKE 411

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A++    +  +++G    D +  T L+  + ++G    A     +M +  ++ D 
Sbjct: 412 GDLESAMEIRKGM--NEEG-VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDD 468

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y ++I+G+C  G++   F    +M   G  P VITYN L+N LCKQG++  A+     
Sbjct: 469 ATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEA 528

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +   GV PD I+Y  +++G C +G   KA + L    EK ++ +   +  ++  Y +
Sbjct: 529 MLNLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDYAYYTSLVSEYNK 582



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 95/176 (53%)

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
           F   +LE    P+   +N++I+ + + G + +A  I + +   G+     +FN LI    
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +  ++ + F LKK M  + I+PDVFTY++LI   C  G + +A QL+DEM +RG+ P+ I
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           T+T LI G      M  A   + ++ T+G+  D + +  L     ++ + +KAR +
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKL 385



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 6/193 (3%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I   C  G + +A+ +R+ M ++G V D +    L++  C+ G +  A+
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             +REM E    P+ ATY   I GYC+   +     L   M  NG +P  +T+N+L++ L
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G + +A   L  +L   +   T D IT  IL++ + KNG     L L N   +K + 
Sbjct: 514 CKQGQMKNANMLLEAML---NLGVTPDDITYNILLEGHCKNGKAEDLLKLRN---EKGLI 567

Query: 294 TDIVAYNVLINGF 306
            D   Y  L++ +
Sbjct: 568 VDYAYYTSLVSEY 580



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 99/213 (46%)

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
           FY  + + G  P    Y  +I   C  G I  A+     + ++ + P    +N +I+G  
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +  +L   F ++  M    +  +VFT++ LI    + G +  A  L  EM   G+ P+  
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           T+  LI        +  A+  Y +ML  G+ PD++ Y  L+ G C  G++ +A ++  ++
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           + +G+  D I +  L   Y +  + + A +I +
Sbjct: 390 KMVGMKPDKITYTTLIDGYCKEGDLESAMEIRK 422



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 67/142 (47%)

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           +L +G    V  +N LI    + GSI DA  +  E+   G+ P   ++N LI   C   +
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRN 273

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +    +L   M    I PD+ TY+ LI G C  G +  AE++F ++Q  GL  + I F  
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333

Query: 547 LKKRYRRMKESDKARDIHQKWL 568
           L     R +  D A + + + L
Sbjct: 334 LIDGQYRSRRMDSAMNTYHQML 355


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 220/449 (48%), Gaps = 19/449 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G +  A  L  +M + G  PD++T+N L++   K+G L++   +  +M +  
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYNA I  +C+   + KA      M  NG++PN VT++  + A CK+G+L +A+
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           KF  ++        T +  T T L+D+  K G+  +AL L  ++ Q  I+ ++V Y  L+
Sbjct: 182 KFFVDM---RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALL 238

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G +  A   F  ML  G  P+  TY  L++   K  +++ A      + +  + 
Sbjct: 239 DGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIK 298

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD + Y TI+ GLC    + +A+  +  + E  +     I+  ++D Y + G  + A ++
Sbjct: 299 PDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTL 358

Query: 424 RDLMLSF--GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + ML    G+  N    N   +A+     +FD      EML  G+ PD   Y  LI  +
Sbjct: 359 LEEMLDLVDGLCKN----NCFEVAK----KLFD------EMLDKGMMPDKIAYTALIDGN 404

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
              G++  AL L D M+  G+  D+  YT LI G    G +++A  +  ++   G+  D 
Sbjct: 405 MKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDE 464

Query: 542 IPFRILKKRYRRMKESDKARDIHQKWLLR 570
           + +  L K+Y  + + D+A ++  +   R
Sbjct: 465 VVYMCLIKKYYALGKVDEALELQNEMAKR 493



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 183/388 (47%), Gaps = 6/388 (1%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           LE+A     +M + R  P   + NA +    +V   D +   F  M   GI+ +  T+NI
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++  LCK+G L  A     ++    +   T D++T   L+D + K G   + + ++  M 
Sbjct: 62  MIDYLCKEGDLEMARSLFTQM---KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK 118

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
             +   D++ YN LIN FC    +  AF +  +M   G  P+V+TY+T ++  CK+G L 
Sbjct: 119 DADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQ 178

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA  F+  + +  + P++ +Y ++I   C  G++ +A + +  +L+  +      +  ++
Sbjct: 179 EAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALL 238

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           DG    G +  A  +   ML+ GV+ N  T+ AL+    +   +  A  + KEM    I 
Sbjct: 239 DGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIK 298

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PD+  Y  ++   CN   +  A  L  E+   GI  + + YT L+  +   G   EA  +
Sbjct: 299 PDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTL 358

Query: 529 FAKIQTL--GLAIDHIPFRILKKRYRRM 554
             ++  L  GL  ++  F + KK +  M
Sbjct: 359 LEEMLDLVDGLCKNNC-FEVAKKLFDEM 385



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 171/365 (46%), Gaps = 3/365 (0%)

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           L++A   F  M    + P   + N L+H L K G    + KF  ++ A         V T
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGA---AGIKRSVFT 58

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             I++D   K GD   A +L+  M +     DIV YN LI+G    G +      F QM 
Sbjct: 59  YNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK 118

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
                PDVITYN L+NC CK  ++ +A  F   +   G+ P+ ++Y T I   C  G + 
Sbjct: 119 DADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQ 178

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A +F + M   ++ P    +  +ID   + G+L+ A  + + +L  G+  NV T+ AL+
Sbjct: 179 EAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALL 238

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                 G + +A  + + ML  G+ P+  TY  L+        +  A  +  EM  + I 
Sbjct: 239 DGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIK 298

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PD++ Y  ++ G C    ++EA+ +  +I+  G+  + + +  L   Y +  ++ +A  +
Sbjct: 299 PDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTL 358

Query: 564 HQKWL 568
            ++ L
Sbjct: 359 LEEML 363



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 150/311 (48%), Gaps = 26/311 (8%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L  +   + ++I   C  G +  AL L  +++Q G   +V+T+  L++ LC+ G ++
Sbjct: 189 RVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMK 248

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A+ V R M     +PN  TY A + G+ +  E++ A  +   M    I+P+ + +  ++
Sbjct: 249 EAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTIL 308

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL------- 283
             LC +  L +A   +GE+   + G  T+ VI +T LMD+YFK+G   +AL L       
Sbjct: 309 WGLCNESRLEEAKLLIGEI--KESGINTNAVIYTT-LMDAYFKSGQATEALTLLEEMLDL 365

Query: 284 ----------------WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
                           +++M  K +  D +AY  LI+G   +G++  A     +M++ G 
Sbjct: 366 VDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGM 425

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             D+  Y  L+  L   G++ +A +    +   GV PD++ Y  +I+     G + +A E
Sbjct: 426 ELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALE 485

Query: 388 FLLSMLEKSVV 398
               M ++ ++
Sbjct: 486 LQNEMAKRGMI 496


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 191/382 (50%), Gaps = 3/382 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+ +T+  L++ LCK  ++++A+ V+ EM E   SPN  T+++ I G+ +   LDKA   
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   GI PN VT+  L+    K      A++   ++L +  G   +  I  + L++ 
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE--GVKVNKFIVDS-LVNG 493

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             +NG   +A+AL+ D     +  D V Y  LI+G    GD+ +AF +  +++ R  LPD
Sbjct: 494 LRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPD 553

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            + YN  +NCLC  GK  EA  F   +   G+ PDQ +Y T+I   C  G+  KA + L 
Sbjct: 554 AVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLH 613

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M   S+ P    +N ++ G    G +  A  + + M+S G S +  T   ++ A ++  
Sbjct: 614 EMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +     + + M+  G+  D+  YN L+   C  G    A  + +EML  GI PD IT+ 
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFN 733

Query: 511 ELIKGHCARGNMKEAEEVFAKI 532
            LI GHC   ++  A   +A++
Sbjct: 734 ALILGHCKSSHLDNAFATYAQM 755



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 210/440 (47%), Gaps = 7/440 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC    +  A  +  +M +K   P+V+T + ++N   K G L+KA    R M 
Sbjct: 382 YTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   +PN  TY   I G+ +    D AL ++  M   G++ N+   + LV+ L + G + 
Sbjct: 442 ERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIE 501

Query: 241 DAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           +A+     +  D  G   S D +  T L+D  FK GD   A     ++  +N+  D V Y
Sbjct: 502 EAMA----LFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           NV IN  C+ G    A ++  +M   G  PD  TYNT++   C++G+  +A      +  
Sbjct: 558 NVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
           + + P+ I+Y T++ GL   G + KA+  L  M+     P       ++    +   L  
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
              I + M++ G+ +++  +N L+      G    A  + +EML  GI PD  T+N LI 
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C   H+  A   Y +ML + I+P+I T+  L+ G  + G + EA  V  +++  GL  
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 540 DHIPFRILKKRYRRMKESDK 559
           +++ + IL   +   K+S+K
Sbjct: 798 NNLTYDILATGHG--KQSNK 815



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 198/437 (45%), Gaps = 3/437 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G    AL +  +M  +G   DV+ +N LV   C+ G ++ A  V+  M E  
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN ATY  FI  YCR   +++A  L+  M  NG+  + VT + LV  LC+ G   +A 
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+   D   A  + +T   L+DS  K G   + L+L  +M  + +  D+V Y  L+
Sbjct: 295 ALFREM---DKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +     G            L     P+ +TY  L++ LCK   +DEA      + +  ++
Sbjct: 352 DWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSIS 411

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ +++ ++I G    G + KA E+   M E+ + P    +  +IDG+ +      A  +
Sbjct: 412 PNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEV 471

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              ML  GV  N F  ++L+    + G I +A +L K+    G+  D   Y  LI     
Sbjct: 472 YHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFK 531

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A +   E++ R + PD + Y   I   C  G  KEA+    +++ +GL  D   
Sbjct: 532 AGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQST 591

Query: 544 FRILKKRYRRMKESDKA 560
           +  +   + R  E+ KA
Sbjct: 592 YNTMIVSHCRKGETAKA 608



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 191/417 (45%), Gaps = 5/417 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D+  +  +I  L   G + TA    ++++ +  +PD + +N  +N LC +G  ++A 
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             + EM  M   P+ +TYN  I  +CR  E  KAL L   M  + I+PN +T+N LV  L
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD-SYFKNGDKFQALALWNDMFQKNI 292
              G +  A   L E+++   G + S +    +L   S  +  D    +  W  M    +
Sbjct: 635 FGTGAVEKAKYLLNEMVS--AGFSPSSLTHRRVLQACSQSRRLDVILDIHEW--MMNAGL 690

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             DI  YN L+   C +G    A     +ML  G  PD IT+N L+   CK   LD A  
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            Y  +    ++P+  ++ T++ GL   G I +A   L+ M +  + P    ++++  G+G
Sbjct: 751 TYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHG 810

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +  +   A  +   M+  G    V T+NALI   T+ G +  A  L K+M   G+ P   
Sbjct: 811 KQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSC 870

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           TY++L+     + +     +   +M  +G +P   T + + +     G   +A+ + 
Sbjct: 871 TYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 197/429 (45%), Gaps = 4/429 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M ++G   D +T N L+  LC+ G ++ A  +      +  + +   +N  I GYCRV 
Sbjct: 125 EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIH-ALDVIGWNTLIAGYCRVG 183

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +   AL +   M   G+  + V +N LV   C+ G + DA + + +++   +     +V 
Sbjct: 184 DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQV-DAARGVLDMM--KEAGVDPNVA 240

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T T  +  Y +     +A  L+  M +  +  D+V  + L+ G C +G  S A+A F +M
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            K G  P+ +TY TL++ L K G+  E     G +   GV  D ++Y  ++  L   G  
Sbjct: 301 DKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKT 360

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            + ++ L   L  ++ P    + V+ID   +  ++  A  +   M    +S NV TF+++
Sbjct: 361 DEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    + G +  A   K+ M   GI P+V TY  LI           AL++Y +ML  G+
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV 480

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             +      L+ G    G ++EA  +F      GL++DH+ +  L     +  +   A  
Sbjct: 481 KVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK 540

Query: 563 IHQKWLLRN 571
             Q+ + RN
Sbjct: 541 FGQELMDRN 549



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 182/416 (43%), Gaps = 3/416 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  L   GKI  A+ L +     G   D + +  L++ L K GD+  A    +E+ + 
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   YN FI   C + +  +A    + M N G++P++ T+N ++ + C+KG    A
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K L E+          ++IT   L+   F  G   +A  L N+M         + +  +
Sbjct: 609 LKLLHEMKMSS---IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRV 665

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +     +  +         M+  G   D+  YNTLL  LC  G   +A+     +  +G+
Sbjct: 666 LQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGI 725

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           APD I++  +I G C    +  A      ML +++ P    +N ++ G    G +  A +
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M   G+  N  T++ L     +  +  +A  L  EM+  G  P V TYN LI    
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
             G +  A +L+ +M +RG+ P   TY  L+ G     N  E ++    ++  G +
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFS 901



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 159/384 (41%), Gaps = 54/384 (14%)

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           RP+ + A+ NA +  +CR+  L  A+ L  +      RP  V +NIL+ AL         
Sbjct: 69  RPA-DPASLNALLYSHCRLRLLRPAIALLRSS-----RPTTVAYNILLAAL--------- 113

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                            D   A A+  +M ++ +  D V  N L
Sbjct: 114 --------------------------------SDHAHAPAVLAEMCKRGVPFDGVTVNTL 141

Query: 303 INGFCLNGDISSAFAYFCQMLKRG---FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           + G C NG + +A A    +  RG      DVI +NTL+   C+ G    A      ++ 
Sbjct: 142 LAGLCRNGQVDAAAA----LADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTA 197

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+  D + Y T++ G C  G +  AR  L  M E  V P    +   I  Y R   +  
Sbjct: 198 QGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEE 257

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AF + + M+  GV  +V T +AL+    R G   +A++L +EM   G  P+  TY  LI 
Sbjct: 258 AFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLID 317

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           +    G     L L  EM+ RG+  D++TYT L+     +G   E ++      +  L+ 
Sbjct: 318 SLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSP 377

Query: 540 DHIPFRILKKRYRRMKESDKARDI 563
           + + + +L     +    D+A  +
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQV 401


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 192/396 (48%), Gaps = 8/396 (2%)

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP-NCATYNA 193
           G A  +     + G  PDV     L+  LC+ G    A  V+R  +E   SP +   YN 
Sbjct: 57  GAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRA-AEGSGSPVDVFAYNT 115

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            + GYCR   LD A  L  +M    + P+  T+  L+  LC +G + DA+  L ++L   
Sbjct: 116 LVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRG 172

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
                 +V+T T+L+++  KN    QA+A+ ++M  K    +IV YNV+ING C  G + 
Sbjct: 173 ---CQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 229

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A     ++   G  PD ++Y TLL  LC   + D+    +  + +    P+++++  +I
Sbjct: 230 DARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 289

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
           +  C  G + +A + L  M E        + N++I+   + G + +AF   + M S+G +
Sbjct: 290 RFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCN 349

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            +  ++  ++    R     DA  L KEM+ +   P+  T+N  I   C  G I  A+ L
Sbjct: 350 PDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIML 409

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            ++M   G T  ++TY  L+ G C +G++  A E+F
Sbjct: 410 IEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELF 445



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 209/491 (42%), Gaps = 44/491 (8%)

Query: 92  LILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           LI +E+L     + +    R     D      +IR+LC  G+   A  + R     G+  
Sbjct: 49  LIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPV 108

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           DV  +N LV   C+ G L+ A  +I     M  +P+  TY   I   C    +  AL L 
Sbjct: 109 DVFAYNTLVAGYCRYGHLDAARRLI---GSMPVAPDAYTYTPLIRVLCDRGRVADALSLL 165

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M   G +PN VT+ +L+ A+CK      A+  L E+ A      T +++T  ++++  
Sbjct: 166 DDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKG---CTPNIVTYNVIINGM 222

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            + G    A  L N +F    Q D V+Y  L+ G C +         F +M+++  +P+ 
Sbjct: 223 CREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNE 282

Query: 332 ITY-----------------------------------NTLLNCLCKQGKLDEASHFYGV 356
           +T+                                   N ++N +CKQG++D+A  F   
Sbjct: 283 VTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNN 342

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G  PD ISY T+++GLC       A+E L  M+  +  P    +N  I    + G 
Sbjct: 343 MGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGL 402

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A  + + M   G +  V T+NAL+      G I  A  L + M      P+  TY  
Sbjct: 403 IEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTT 459

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L+   CN   +  A +L  EML R   P+++T+  L+   C +G + EA E+  ++   G
Sbjct: 460 LLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHG 519

Query: 537 LAIDHIPFRIL 547
              + I +  L
Sbjct: 520 CTPNLITYNTL 530



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 138/560 (24%), Positives = 236/560 (42%), Gaps = 78/560 (13%)

Query: 75  KDSDNEGNPQAVFNALDLILK----ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCL 130
           + ++  G+P  VF    L+       +LD  + +  + PV      D   +  +IR LC 
Sbjct: 99  RAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPV----APDAYTYTPLIRVLCD 154

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G++  AL L   M+++G  P+V+T+  L+  +CK    E+A  V+ EM     +PN  T
Sbjct: 155 RGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVT 214

Query: 191 YNAFITGYCRVNELDKAL-----------------------------------HLFSTMA 215
           YN  I G CR   +D A                                     LF+ M 
Sbjct: 215 YNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMM 274

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS--DVITSTIL------ 267
                PN VT ++L+   C+ G++  A++ L ++   +    T+  +++ ++I       
Sbjct: 275 EKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVD 334

Query: 268 --------MDSYFKNGDKFQALAL---------WND-------MFQKNIQTDIVAYNVLI 303
                   M SY  N D      +         WND       M + N   + V +N  I
Sbjct: 335 DAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFI 394

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
              C  G I  A     QM + G    V+TYN L+N  C QG +D A   +  +      
Sbjct: 395 CILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CK 451

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ I+Y T++ GLC    +  A E +  ML +   P    +NV+++ + + G L  A  +
Sbjct: 452 PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIEL 511

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M+  G + N+ T+N L    T+  S  DA  L   ++  G+ PDV T++ +IG    
Sbjct: 512 VEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSK 571

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              +  A+Q++      G+ P  + Y +++ G C R  +  A +  A + + G   +   
Sbjct: 572 EDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNEST 631

Query: 544 FRILKKRYRRMKESDKARDI 563
           + IL +   R     +A+D+
Sbjct: 632 YIILIEGLAREGLLKEAQDL 651



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 198/426 (46%), Gaps = 12/426 (2%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   +  +++ LC   +      L  +M++K  +P+ +T + L+   C+ G +E+A  
Sbjct: 244 QPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQ 303

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+++M+E   + N    N  I   C+   +D A    + M + G  P+ +++  ++  LC
Sbjct: 304 VLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLC 363

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           +     DA + L E++ ++      + +T    +    + G   QA+ L   M +     
Sbjct: 364 RAERWNDAKELLKEMVRNN---CPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTV 420

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
            +V YN L+NGFC+ G I SA   F  M  +   P+ ITY TLL  LC   +LD A+   
Sbjct: 421 GVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELV 477

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +      P+ +++  ++   C  G + +A E +  M+E    P    +N + DG  + 
Sbjct: 478 AEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKD 537

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALI---LAETRGGSIFDAFSLKKEMLLDGIFPDV 471
               +A  +   ++S GVS +V TF+++I     E R       F L +++   G+ P  
Sbjct: 538 CSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDI---GMRPKA 594

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
             YN ++   C    I  A+     M+  G  P+  TY  LI+G    G +KEA+++ + 
Sbjct: 595 LVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSM 654

Query: 532 IQTLGL 537
           + + G+
Sbjct: 655 LCSRGV 660



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 163/336 (48%), Gaps = 8/336 (2%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D  K + + G   C    D   +  V++ LC   +   A  L ++M++    P+ +T N 
Sbjct: 335 DAFKFLNNMGSYGCN--PDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNT 392

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
            +  LC+ G +E+A  +I +M E   +    TYNA + G+C    +D AL LF +M    
Sbjct: 393 FICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP--- 449

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
            +PN +T+  L+  LC    L  A + + E+L  D      +V+T  +L++ + + G   
Sbjct: 450 CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRD---CPPNVVTFNVLVNFFCQKGFLD 506

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A+ L   M +     +++ YN L +G   +     A      ++ +G  PDVIT+++++
Sbjct: 507 EAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSII 566

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             L K+ +++EA   + +    G+ P  + Y  I+ GLC   +I  A +FL  M+    +
Sbjct: 567 GILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCM 626

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           P    + ++I+G  R G L  A  +  ++ S GV S
Sbjct: 627 PNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVS 662



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 157/369 (42%), Gaps = 10/369 (2%)

Query: 206 KALHLFSTMANNGIRPNRVTHNI---LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           K  HL +  A     PN   +     L   + ++ L G A   L E+ A  DG+A  DV 
Sbjct: 20  KPHHLAAAAATRPESPNVAPNPASARLRRLIAREDLAGAA--RLVELSASRDGEA-PDVY 76

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             T L+ +  + G    A  +           D+ AYN L+ G+C  G + +A      M
Sbjct: 77  LCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM 136

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
                 PD  TY  L+  LC +G++ +A      + + G  P+ ++Y  +++ +C +   
Sbjct: 137 ---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGF 193

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A   L  M  K   P    +NVII+G  R G + +A  + + + S+G   +  ++  L
Sbjct: 194 EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTL 253

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +          D   L  EM+     P+  T+++LI   C  G +  A+Q+  +M     
Sbjct: 254 LKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHEC 313

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             +      +I   C +G + +A +    + + G   D I +  + K   R +  + A++
Sbjct: 314 ATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKE 373

Query: 563 IHQKWLLRN 571
           +  K ++RN
Sbjct: 374 L-LKEMVRN 381


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 218/463 (47%), Gaps = 18/463 (3%)

Query: 90  LDLILKENL-----DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKM 144
           LD +L+EN+          MR  G     ++ +   +  +IR LC   ++  A  +  +M
Sbjct: 129 LDALLRENMVGAVVPVYDNMRKAG-----VDPNVYTYNLLIRALCQNDRVDAARKMLDEM 183

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
            +KG  PD ++H  +V+ +CK+G +E+A   + E       P  A+YNA +   C    +
Sbjct: 184 SRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRM 238

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
            +   + + M   G++PN VT+  +V A CK   L  A   L  +++      T +V+T 
Sbjct: 239 WEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMG---CTPNVLTF 295

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T L+  +F++G    AL++W+ M  +      ++YNVLI G C  GD+  A  +F  M +
Sbjct: 296 TALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKR 355

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
              LP+  TY+TL++     G LD A   +  +  +G  P+ + Y  +I  LC      +
Sbjct: 356 NALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQ 415

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A   +  ML  +  P    +N +I     CG +  A ++   M   G   N  T+N L+ 
Sbjct: 416 AESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLH 475

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              R G+  DAF++  EML +G    + TYN +I   C +     A+ L   M+ +GI P
Sbjct: 476 GLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQP 535

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           D  T+  +I  +C  G +  A  +  ++  +    + + + IL
Sbjct: 536 DAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTIL 578



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 193/394 (48%), Gaps = 8/394 (2%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P V  +N+L++ L +   +     V   M +    PN  TYN  I   C+ + +D A  +
Sbjct: 120 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M+  G  P+ V+H  +V  +CK G + +A  FL E +     +A+ + +   +  + 
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPV---QASYNAVVHALCGE- 235

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
            F+  + F  +   N+M Q+ +Q ++V Y  +++ FC   ++  A A   +M+  G  P+
Sbjct: 236 -FRMWEVFSVV---NEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPN 291

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+T+  L+    + GK+ +A   +  +   G AP  ISY  +I+GLC  GD+  A +F  
Sbjct: 292 VLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFN 351

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
           SM   +++P    ++ ++DG+   GDL  A  I + M S G   NV  +  +I    +  
Sbjct: 352 SMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM 411

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
               A SL  +ML+D   P+  T+N LIG  C+ G +  AL ++  M R G  P+  TY 
Sbjct: 412 MFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYN 471

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           EL+ G    GN K+A  +  ++   G  +  + +
Sbjct: 472 ELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTY 505



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 191/414 (46%), Gaps = 15/414 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AV+  LC   ++     +  +M+Q+G  P+V+T+  +V+  CK  +L  A  ++  M  M
Sbjct: 227 AVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSM 286

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +PN  T+ A + G+    ++  AL ++  M + G  P+ +++N+L+  LC  G L  A
Sbjct: 287 GCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGA 346

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           + F   +          +  T + L+D +   GD   A+ +WN+M     + ++V Y  +
Sbjct: 347 LDFFNSM---KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNM 403

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+  C       A +   +ML     P+ +T+NTL+  LC  G++  A + +  + + G 
Sbjct: 404 IDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGC 463

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+  +Y  ++ GL   G+   A   ++ ML          +N +I+   +     +A  
Sbjct: 464 HPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAML 523

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M+  G+  + FTFNA+I A  + G +  A  L  +M       +V  Y +LI   C
Sbjct: 524 LLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELC 583

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           N G +  A+    +ML  GI P+  T+  L++             +F  I T+G
Sbjct: 584 NQGKLSNAMVYLLKMLYEGICPNEATWNVLVRA------------IFTNIGTIG 625



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/417 (23%), Positives = 186/417 (44%), Gaps = 44/417 (10%)

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           H   V  L   GD++   + ++EM     +       A I  + R    D+AL  F   +
Sbjct: 54  HEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRAS 113

Query: 216 NNGIR-PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
           + G R P    +N L+ AL ++ ++G  V                               
Sbjct: 114 DLGCRDPGVRVYNHLLDALLRENMVGAVVP------------------------------ 143

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
                   ++++M +  +  ++  YN+LI   C N  + +A     +M ++G  PD +++
Sbjct: 144 --------VYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSH 195

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
            T+++ +CK G+++EA    G L++T   P Q SY  ++  LC    + +    +  M++
Sbjct: 196 GTIVSGMCKLGRVEEAR---GFLAET--VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQ 250

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           + + P    +  I+D + +  +L  A +I   M+S G + NV TF AL+      G + D
Sbjct: 251 RGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHD 310

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A S+   M+ +G  P   +YN+LI   C +G +  AL  ++ M R  + P+  TY+ L+ 
Sbjct: 311 ALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVD 370

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           G    G++  A  ++ ++++ G   + + +  +     +    D+A  +  K L+ N
Sbjct: 371 GFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 427


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 212/452 (46%), Gaps = 65/452 (14%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS---EMR-PSPNCATYNAFI 195
           L  +M +KG +PDV+T N  ++ LC+ G + +A  + R+M    E+  P PN  T+N  +
Sbjct: 241 LVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLML 300

Query: 196 TGYCRVNELDKALHLFSTM-----------------------------------ANNGIR 220
            G+C+   +++A  L  TM                                     NGI 
Sbjct: 301 KGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIE 360

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           PN  ++NI++  LC+  ++ DA + +  ++++       D +T T L+  Y   G  F+A
Sbjct: 361 PNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNG---VYPDTVTYTTLLHGYCSKGKVFEA 417

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
            A+ N+M +K    +    N L+N     G  S A     +M ++ +  D +T N ++N 
Sbjct: 418 KAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNG 477

Query: 341 LCKQGKLDEASHFYGVLSKTGV----------------------APDQISYKTIIQGLCI 378
           LC+ G+L++AS     +   G                        PD I+Y T+I GLC 
Sbjct: 478 LCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCK 537

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G + +A++  + M+ K++ P+   ++  +  + + G +S+A  +   M   G S  + T
Sbjct: 538 VGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQT 597

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N+LIL     G IF+ + L  EM   GI PD+ TYN +I   C  G    A  L  EML
Sbjct: 598 YNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEML 657

Query: 499 RRG-ITPDIITYTELIKGHCARGNMKEAEEVF 529
            +G ++P++ ++  LIK  C  G+ K A E+F
Sbjct: 658 DKGVVSPNVSSFKILIKAFCKSGDFKVACELF 689



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 197/429 (45%), Gaps = 27/429 (6%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++  C  G +  A  L   M + G    + ++N  +  L + G L +   V+ EM E  
Sbjct: 299 MLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENG 358

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  +YN  + G CR + +  A  L   M +NG+ P+ VT+  L+H  C KG + +A 
Sbjct: 359 IEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAK 418

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E++         +  T   L++S +K G K +A  +   M +K+ Q D V  N+++
Sbjct: 419 AILNEMIRKG---CHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVV 475

Query: 304 NGFCLNGDISSAFAYFCQMLKRGF----------------------LPDVITYNTLLNCL 341
           NG C NG++  A     +M   G                       +PDVITY TL+N L
Sbjct: 476 NGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGL 535

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK GKL+EA   +  +    + PD ++Y T +   C  G I  A   L  M         
Sbjct: 536 CKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTL 595

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +N +I G G  G +   + + D M   G+  ++ T+N +I     GG   DA SL  E
Sbjct: 596 QTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHE 655

Query: 462 MLLDGIF-PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           ML  G+  P+V ++ +LI A C  G   +A +L+D  L      + + Y+ +     A G
Sbjct: 656 MLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEAL-YSLMFNELLAGG 714

Query: 521 NMKEAEEVF 529
            + +A+E+F
Sbjct: 715 KLSDAKELF 723



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 176/365 (48%), Gaps = 13/365 (3%)

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           +M +   +P   T+N  I   C  N LD A  LF  M+  G +PN+ T  ILV   C+ G
Sbjct: 141 DMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAG 200

Query: 238 LLGDAVKFLGEVLADDDGKATSDV--ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
               A++F+       DGK   +V  +    L+ S+ K     +A  L   M +K +  D
Sbjct: 201 RTKQALEFV-------DGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPD 253

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL----PDVITYNTLLNCLCKQGKLDEAS 351
           +V +N  I+  C  G +  A   F  M   G L    P+V+T+N +L   C++G ++EA 
Sbjct: 254 VVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEAR 313

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                + K G      SY T + GL  +G +++ R  L  M+E  + P  + +N+++DG 
Sbjct: 314 SLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGL 373

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            R   + +A  + DLM+S GV  +  T+  L+      G +F+A ++  EM+  G  P+ 
Sbjct: 374 CRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNT 433

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
           +T N L+ +    G    A ++  +M  +    D +T   ++ G C  G +++A EV ++
Sbjct: 434 YTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSE 493

Query: 532 IQTLG 536
           + T G
Sbjct: 494 MWTDG 498



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 193/436 (44%), Gaps = 25/436 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC    +  A  L  KM +KG  P+  T   LV   C+ G  ++A   +    +M 
Sbjct: 157 LIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVD--GKMG 214

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            + N   YN  ++ +C+ +  D+A  L   M   G+ P+ VT N  + ALC+ G + +A 
Sbjct: 215 GNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEAS 274

Query: 244 KFLGEVLADDD-GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +   ++  D + G    +V+T  +++  + + G   +A +L   M +      + +YN  
Sbjct: 275 RIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTW 334

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + G   NG +    +   +M++ G  P++ +YN +++ LC+   + +A     ++   GV
Sbjct: 335 LLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGV 394

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y T++ G C  G + +A+  L  M+ K   P  +  N +++   + G  S A  
Sbjct: 395 YPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEE 454

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI--------------- 467
           +   M       +  T N ++    R G +  A  +  EM  DG                
Sbjct: 455 MLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNS 514

Query: 468 -------FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
                   PDV TY  LI   C +G +  A + + EM+ + + PD +TY   +   C +G
Sbjct: 515 IHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQG 574

Query: 521 NMKEAEEVFAKIQTLG 536
            +  A  V   ++  G
Sbjct: 575 KISSALRVLKDMERNG 590



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 190/427 (44%), Gaps = 31/427 (7%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           MIQ G  P+  T N L+  LC+   L+ A  +  +MSE    PN  T    + G+CR   
Sbjct: 142 MIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGR 201

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
             +AL         G   NRV +N LV + CK+ +  +A K +  +    +     DV+T
Sbjct: 202 TKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERM---TEKGLLPDVVT 256

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKN----IQTDIVAYNVLINGFCLNGDISSAFAYF 319
               + +  + G  F+A  ++ DM         + ++V +N+++ GFC  G +  A +  
Sbjct: 257 FNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLV 316

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M K G    + +YNT L  L + GKL E       + + G+ P+  SY  ++ GLC +
Sbjct: 317 ETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRN 376

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
             ++ AR  +  M+   V P+   +  ++ GY   G +  A +I + M+  G   N +T 
Sbjct: 377 HMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTC 436

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N L+ +  + G   +A  + ++M       D  T N+++   C  G +  A ++  EM  
Sbjct: 437 NTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWT 496

Query: 500 RGI----------------------TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            G                        PD+ITYT LI G C  G ++EA++ F ++    L
Sbjct: 497 DGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNL 556

Query: 538 AIDHIPF 544
             D + +
Sbjct: 557 HPDSVTY 563



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 196/451 (43%), Gaps = 28/451 (6%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   +E +   +  V+  LC    +  A  L   M+  G  PD +T+  L++  C  G +
Sbjct: 355 VENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKV 414

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A  ++ EM      PN  T N  +    +     +A  +   M     + + VT NI+
Sbjct: 415 FEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIV 474

Query: 230 VHALCKKGLLGDAVKFLGEVLADDD---GKA----------------TSDVITSTILMDS 270
           V+ LC+ G L  A + + E+  D     GK                   DVIT T L++ 
Sbjct: 475 VNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLING 534

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K G   +A   + +M  KN+  D V Y+  +  FC  G ISSA      M + G    
Sbjct: 535 LCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKT 594

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           + TYN+L+  L  +G++ E       + + G+ PD  +Y  +I  LC  G    A   L 
Sbjct: 595 LQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLH 654

Query: 391 SMLEKSVV-PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF-GVSSNVFT--FNALILAE 446
            ML+K VV P    + ++I  + + GD   A  + D+ LS  G    +++  FN L+   
Sbjct: 655 EMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYSLMFNELL--- 711

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
             GG + DA  L +  L   +    F Y  LI   C  G +  A  L  +++ +G   D 
Sbjct: 712 -AGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDH 770

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            ++  +I G   RGN ++A+E+  +I  L L
Sbjct: 771 SSFIPVIDGLSKRGNKQQADEL-GRIMELAL 800


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 207/393 (52%), Gaps = 2/393 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +++ LCL G+   AL L    + KG   D + +  L+N LCK+G    A  ++R+M + 
Sbjct: 131 TLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKG 190

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   YN  + G C+   + +A  L S M   GI  +  T+N L+H  C  G    A
Sbjct: 191 GVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGA 250

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V+ L E++  +D +   DV T  IL+D+  K G   +A  ++  M ++ ++ D+V+ N L
Sbjct: 251 VRLLNEMVMKEDVRP--DVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNAL 308

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +NG+CL G +S A   F +M++RG LP+VI+Y+TL+N  CK   +DEA      + +  +
Sbjct: 309 MNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNL 368

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y  ++ GL   G ++   + + +M      P+   +NV++D Y +   L  A +
Sbjct: 369 VPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALA 428

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   ++  G+S N+ T+N LI    +GG +  A  + + + + G  P++ TYN++I    
Sbjct: 429 LFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLR 488

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             G +  A  L  EM+  G  P+ +T+  L++ 
Sbjct: 489 REGLLDEAEALLLEMVDDGFPPNAVTFDPLVRA 521



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 206/420 (49%), Gaps = 5/420 (1%)

Query: 136 TALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
           T + L   +  KGT  P ++T +  +N L  +G +  A  V+ ++ +     +  T    
Sbjct: 73  TVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTL 132

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           + G C      +AL+L+    + G   + V +  L++ LCK G   DA++ L ++   + 
Sbjct: 133 MKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKM---EK 189

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           G    ++I   +++D   K G   +A  L ++M  K I  D+  YN LI+GFC  G    
Sbjct: 190 GGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQG 249

Query: 315 AFAYFCQM-LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
           A     +M +K    PDV T+N L++ LCK G + EA + +G++ K G+ PD +S   ++
Sbjct: 250 AVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALM 309

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            G C+ G + +A+E    M+E+  +P    ++ +I+GY +   +  A  +   M    + 
Sbjct: 310 NGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLV 369

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            +  T+N L+   ++ G +   + L + M   G  PD+ TYN+L+        +  AL L
Sbjct: 370 PDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALAL 429

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
           +  ++  GI+P+I TY  LI G C  G MK A+E+F  +   G   +   + I+    RR
Sbjct: 430 FQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRR 489



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 198/386 (51%), Gaps = 6/386 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++G A  +  K++++G   D  T   L+  LC  G   +A ++         S +   Y
Sbjct: 105 GQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCY 164

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I G C++ +   A+ L   M   G+RPN + +N++V  LCK+GL+ +A     E++ 
Sbjct: 165 GTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMV- 223

Query: 252 DDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLN 309
              GK    DV T   L+  +   G    A+ L N+M  K +++ D+  +N+L++  C  
Sbjct: 224 ---GKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKL 280

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G ++ A   F  M+KRG  PDV++ N L+N  C +G + EA   +  + + G  P+ ISY
Sbjct: 281 GMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISY 340

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            T+I G C    + +A   L  M ++++VP+   +N ++DG  + G +   + + + M +
Sbjct: 341 STLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRA 400

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G + ++ T+N L+    +   +  A +L + ++  GI P++ TYN+LI   C  G +  
Sbjct: 401 SGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKA 460

Query: 490 ALQLYDEMLRRGITPDIITYTELIKG 515
           A +++  +  +G  P+I TY  +I G
Sbjct: 461 AKEIFQLLSVKGCRPNIRTYNIMING 486



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 188/405 (46%), Gaps = 5/405 (1%)

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI-RP 221
           L K    + A      M  + P P+  + N  ++   +       + L S + + G  +P
Sbjct: 30  LPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKP 89

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           + VT +I +++L   G +G A   + +++    G    D  T T LM      G  F+AL
Sbjct: 90  SLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFG---VDPFTLTTLMKGLCLKGRTFEAL 146

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            L++    K    D V Y  LING C  G    A     +M K G  P++I YN +++ L
Sbjct: 147 NLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGL 206

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS-VVPE 400
           CK+G + EA      +   G+  D  +Y ++I G C  G    A   L  M+ K  V P+
Sbjct: 207 CKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPD 266

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
            + +N+++D   + G ++ A ++  LM+  G+  +V + NAL+      G + +A  +  
Sbjct: 267 VYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFD 326

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            M+  G  P+V +Y+ LI   C +  +  AL+L  EM +R + PD +TY  L+ G    G
Sbjct: 327 RMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSG 386

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            +    ++   ++  G A D I + +L   Y + +  DKA  + Q
Sbjct: 387 RVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQ 431



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 3/253 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  G +  A  +   MI++G  PDV++ N L+N  C  G + +A  V   M E  
Sbjct: 273 LVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERG 332

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  +Y+  I GYC+V  +D+AL L + M    + P+ VT+N L+  L K G +    
Sbjct: 333 KLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEW 392

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             +  + A   G+A  D+IT  +L+D Y K     +ALAL+  +    I  +I  YN+LI
Sbjct: 393 DLVEAMRAS--GQA-PDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILI 449

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G + +A   F  +  +G  P++ TYN ++N L ++G LDEA      +   G  
Sbjct: 450 DGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFP 509

Query: 364 PDQISYKTIIQGL 376
           P+ +++  +++ L
Sbjct: 510 PNAVTFDPLVRAL 522



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 116/231 (50%), Gaps = 3/231 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE D     A++   CL G +  A  +  +M+++G +P+V++++ L+N  CK+  +++A 
Sbjct: 298 LEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEAL 357

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM +    P+  TYN  + G  +   +     L   M  +G  P+ +T+N+L+   
Sbjct: 358 RLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDY 417

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K+  L  A+     ++   D   + ++ T  IL+D   K G    A  ++  +  K  +
Sbjct: 418 LKRECLDKALALFQHIV---DTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCR 474

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
            +I  YN++ING    G +  A A   +M+  GF P+ +T++ L+  L ++
Sbjct: 475 PNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLEK 525



 Score = 45.4 bits (106), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 50/98 (51%)

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P + T ++ I +  +LG + LA  +  ++++RG   D  T T L+KG C +G   EA  +
Sbjct: 89  PSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNL 148

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +    + G + D + +  L     +M ++  A ++ +K
Sbjct: 149 YDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRK 186


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 191/382 (50%), Gaps = 3/382 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+ +T+  L++ LCK  ++++A+ V+ EM E   SPN  T+++ I G+ +   LDKA   
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   GI PN VT+  L+    K      A++   ++L +  G   +  I  + L++ 
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE--GVKVNKFIVDS-LVNG 493

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             +NG   +A+AL+ D     +  D V Y  LI+G    GD+ +AF +  +++ R  LPD
Sbjct: 494 LRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPD 553

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            + YN  +NCLC  GK  EA  F   +   G+ PDQ +Y T+I   C  G+  KA + L 
Sbjct: 554 AVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLH 613

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M   S+ P    +N ++ G    G +  A  + + M+S G S +  T   ++ A ++  
Sbjct: 614 EMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +     + + M+  G+  D+  YN L+   C  G    A  + +EML  GI PD IT+ 
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFN 733

Query: 511 ELIKGHCARGNMKEAEEVFAKI 532
            LI GHC   ++  A   +A++
Sbjct: 734 ALILGHCKSSHLDNAFATYAQM 755



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 210/440 (47%), Gaps = 7/440 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC    +  A  +  +M +K   P+V+T + ++N   K G L+KA    R M 
Sbjct: 382 YTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   +PN  TY   I G+ +    D AL ++  M   G++ N+   + LV+ L + G + 
Sbjct: 442 ERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIE 501

Query: 241 DAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           +A+     +  D  G   S D +  T L+D  FK GD   A     ++  +N+  D V Y
Sbjct: 502 EAMA----LFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           NV IN  C+ G    A ++  +M   G  PD  TYNT++   C++G+  +A      +  
Sbjct: 558 NVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
           + + P+ I+Y T++ GL   G + KA+  L  M+     P       ++    +   L  
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
              I + M++ G+ +++  +N L+      G    A  + +EML  GI PD  T+N LI 
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C   H+  A   Y +ML + I+P+I T+  L+ G  + G + EA  V  +++  GL  
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 540 DHIPFRILKKRYRRMKESDK 559
           +++ + IL   +   K+S+K
Sbjct: 798 NNLTYDILATGHG--KQSNK 815



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 197/434 (45%), Gaps = 3/434 (0%)

Query: 127 DLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           D+   G    AL +  +M  +G   DV+ +N LV   C+ G ++ A  V+  M E    P
Sbjct: 178 DIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP 237

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N ATY  FI  YCR   +++A  L+  M  NG+  + VT + LV  LC+ G   +A    
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            E+   D   A  + +T   L+DS  K G   + L+L  +M  + +  D+V Y  L++  
Sbjct: 298 REM---DKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
              G            L     P+ +TY  L++ LCK   +DEA      + +  ++P+ 
Sbjct: 355 GKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           +++ ++I G    G + KA E+   M E+ + P    +  +IDG+ +      A  +   
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           ML  GV  N F  ++L+    + G I +A +L K+    G+  D   Y  LI      G 
Sbjct: 475 MLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGD 534

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A +   E++ R + PD + Y   I   C  G  KEA+    +++ +GL  D   +  
Sbjct: 535 MPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNT 594

Query: 547 LKKRYRRMKESDKA 560
           +   + R  E+ KA
Sbjct: 595 MIVSHCRKGETAKA 608



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 192/420 (45%), Gaps = 5/420 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D+  +  +I  L   G + TA    ++++ +  +PD + +N  +N LC +G  ++A 
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             + EM  M   P+ +TYN  I  +CR  E  KAL L   M  + I+PN +T+N LV  L
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD-SYFKNGDKFQALALWNDMFQKNI 292
              G +  A   L E+++   G + S +    +L   S  +  D    +  W  M    +
Sbjct: 635 FGTGAVEKAKYLLNEMVS--AGFSPSSLTHRRVLQACSQSRRLDVILDIHEW--MMNAGL 690

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             DI  YN L+   C +G    A     +ML  G  PD IT+N L+   CK   LD A  
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            Y  +    ++P+  ++ T++ GL   G I +A   L+ M +  + P    ++++  G+G
Sbjct: 751 TYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHG 810

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +  +   A  +   M+  G    V T+NALI   T+ G +  A  L K+M   G+ P   
Sbjct: 811 KQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSC 870

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY++L+     + +     +   +M  +G +P   T + + +     G   +A+ +   +
Sbjct: 871 TYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 182/416 (43%), Gaps = 3/416 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  L   GKI  A+ L +     G   D + +  L++ L K GD+  A    +E+ + 
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   YN FI   C + +  +A    + M N G++P++ T+N ++ + C+KG    A
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K L E+          ++IT   L+   F  G   +A  L N+M         + +  +
Sbjct: 609 LKLLHEMKMSS---IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRV 665

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +     +  +         M+  G   D+  YNTLL  LC  G   +A+     +  +G+
Sbjct: 666 LQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGI 725

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           APD I++  +I G C    +  A      ML +++ P    +N ++ G    G +  A +
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M   G+  N  T++ L     +  +  +A  L  EM+  G  P V TYN LI    
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
             G +  A +L+ +M +RG+ P   TY  L+ G     N  E ++    ++  G +
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFS 901



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 194/431 (45%), Gaps = 8/431 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF--ITGYCR 200
           +M ++G   D +T N L+  LC+ G ++ A  +      + P  + A   +   I G+  
Sbjct: 125 EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIAGF-- 182

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
             +   AL +   M   G+  + V +N LV   C+ G + DA + + +++   +     +
Sbjct: 183 -GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQV-DAARGVLDMM--KEAGVDPN 238

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           V T T  +  Y +     +A  L+  M +  +  D+V  + L+ G C +G  S A+A F 
Sbjct: 239 VATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFR 298

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +M K G  P+ +TY TL++ L K G+  E     G +   GV  D ++Y  ++  L   G
Sbjct: 299 EMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQG 358

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
              + ++ L   L  ++ P    + V+ID   +  ++  A  +   M    +S NV TF+
Sbjct: 359 KTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFS 418

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           ++I    + G +  A   K+ M   GI P+V TY  LI           AL++Y +ML  
Sbjct: 419 SVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE 478

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G+  +      L+ G    G ++EA  +F      GL++DH+ +  L     +  +   A
Sbjct: 479 GVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTA 538

Query: 561 RDIHQKWLLRN 571
               Q+ + RN
Sbjct: 539 FKFGQELMDRN 549



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 154/382 (40%), Gaps = 50/382 (13%)

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           RP+ + A+ NA +  +CR+  L  A+ L  +      RP  V +NIL+ AL         
Sbjct: 69  RPA-DPASLNALLYSHCRLRLLRPAIALLRSS-----RPTTVAYNILLAALS-------- 114

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                            D   A A+  +M ++ +  D V  N L
Sbjct: 115 ---------------------------------DHAHAPAVLAEMCKRGVPFDGVTVNTL 141

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL-LNCLCKQGKLDEASHFYGVLSKTG 361
           + G C NG + +A A        G  P + +  TL L  +   G    A      ++  G
Sbjct: 142 LAGLCRNGQVDAAAAL--ADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQG 199

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           +  D + Y T++ G C  G +  AR  L  M E  V P    +   I  Y R   +  AF
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAF 259

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + + M+  GV  +V T +AL+    R G   +A++L +EM   G  P+  TY  LI + 
Sbjct: 260 DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSL 319

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
              G     L L  EM+ RG+  D++TYT L+     +G   E ++      +  L+ + 
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNG 379

Query: 542 IPFRILKKRYRRMKESDKARDI 563
           + + +L     +    D+A  +
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQV 401


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 214/490 (43%), Gaps = 40/490 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  G +  A  L +KM   G  P+V+T+  L++ LCK      A   ++ M 
Sbjct: 13  YTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRML 72

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  TYN+ I G C  N +D A  +   +  NG  PN +T++ LV   C++  L 
Sbjct: 73  RSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLD 132

Query: 241 DAVKFLGEVL------------------------------ADDDGKATS----DVITSTI 266
            A   + E++                               D D    S    DV+T   
Sbjct: 133 QARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNT 192

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
            +    K G   + L +  +M +  I  D+V +  +I+G C    I  AF  F  ML+RG
Sbjct: 193 FISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERG 252

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLS--KTGVAPDQISYKTIIQGLCIHGDIVK 384
            +PD +TY+ +L+ L +  +LD        +   K G   +  ++   I  LC  G    
Sbjct: 253 CVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPL 312

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG-VSSNVFTFNALI 443
           A+  LL M+E   +P    +N +IDG  + G++ +A+ +   ML  G    +V  FN LI
Sbjct: 313 AKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLI 372

Query: 444 LAETRGGSIFDAFSLKKEMLLDGI-FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
               + G +  A  L  EM    I  PDV TYN LI      G +  A  L  EM   G 
Sbjct: 373 SGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGC 432

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            P+++TY  LI G+   G  +EAE +F ++   G   D I +  +   + +     KA  
Sbjct: 433 KPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEG 492

Query: 563 IHQKWLLRNK 572
           ++Q+  L+NK
Sbjct: 493 VYQQ--LKNK 500



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 205/407 (50%), Gaps = 14/407 (3%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M   G    V+T+  L++ LCK GDL+ A  ++++M++   +PN  TY A I G C+   
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
              A+     M  +G  P+ VT+N L+H LC    + DA   L E++ +  G A + +  
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRN--GFAPNHITY 118

Query: 264 STILM-DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC-- 320
           ST+++ +   +  D  QA  L  +M  +    ++V Y   I GFC     SS   Y C  
Sbjct: 119 STLVIWNCRRRRLD--QARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSR--YECRD 174

Query: 321 --QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             +M++ G +PDV+TYNT ++ LCK GKLD+       + + G+ PD +++ +II GLC 
Sbjct: 175 GDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCK 234

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM--LSFGVSSNV 436
              I  A +    MLE+  VP+   +++++D   R   L     + + M  +  G    V
Sbjct: 235 ANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEV 294

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           +T NA I A  R G    A ++   M+  G  P++ +YN +I   C  G++  A +L  +
Sbjct: 295 YTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRK 354

Query: 497 MLRRGIT-PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           ML  G   PD+I +  LI G C  G + +A ++  +++   + +  +
Sbjct: 355 MLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDV 401



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 208/435 (47%), Gaps = 18/435 (4%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +MI+ G +PDV+T+N  ++ LCK G L+K   ++ EM      P+  T+ + I+G C+ N
Sbjct: 177 EMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKAN 236

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            +D A  +F  M   G  P+ +T++I++  L +   L D V  + E +         +V 
Sbjct: 237 RIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRL-DTVDEVLEHMQAMKAGCVMEVY 295

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T    + +  ++G    A  +   M +     ++++YN +I+G C +G++  A+    +M
Sbjct: 296 THNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKM 355

Query: 323 LKRGFL-PDVITYNTLLNCLCKQGKLDEASHFY-GVLSKTGVAPDQISYKTIIQGLCIHG 380
           L  G   PDVI +NTL++  CK G+L +A      + +K    PD ++Y T+I G    G
Sbjct: 356 LDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFG 415

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            + +A+  L  M      P    +  +I+GY + G    A S+ D M + G   ++ T+N
Sbjct: 416 SLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYN 475

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIF--PDVFTYNLLIGASCNLGHIHLALQLYDEML 498
            ++ A ++ G +  A  + +++     +  PD  TY +LI   C        L L  EM 
Sbjct: 476 TVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMT 535

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAK---IQTLGLAIDHIP----FRILKKRY 551
            RG + D  TY  LI        + E EEV +K   +    L  D +P    F  L + +
Sbjct: 536 ARGWSCDSYTYNVLI------AKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLF 589

Query: 552 RRMKESDKARDIHQK 566
            R  + + AR + Q+
Sbjct: 590 LRTGDVNSARSMVQE 604



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 183/410 (44%), Gaps = 48/410 (11%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L + L+ L+ M   G     +  D     ++I  LC   +I  A  + + M+++G VPD 
Sbjct: 203 LDKGLEMLEEMDRGG-----IPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDS 257

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPS--PNCATYNAFITGYCRVNELDKALHLF 211
           LT++ +++ L +   L+  D V+  M  M+        T+NAFI   CR  +   A ++ 
Sbjct: 258 LTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNIL 317

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M  +G  PN +++N ++  LCK G + DA K   ++L  D G    DVI    L+  +
Sbjct: 318 LGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML--DSGCCKPDVIFFNTLISGF 375

Query: 272 FKNGDKFQALALWNDMFQKNI------------------------------------QTD 295
            K G   QA  L  +M  KNI                                    + +
Sbjct: 376 CKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPN 435

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           +V Y  LING+  +G    A + F +M  +G  PD+ITYNT+L+   K G + +A   Y 
Sbjct: 436 VVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQ 495

Query: 356 VL-SKTG-VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
            L +KT   +PD I+Y+ +I G C   D  +    L  M  +    + + +NV+I     
Sbjct: 496 QLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAE 555

Query: 414 CGDL-SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
             ++ S A ++   ML      +   FN+L+    R G +  A S+ +EM
Sbjct: 556 TEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEM 605



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 3/240 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKG-TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +I   C  G++  A  L  +M  K   VPDV+T+N L++   K G L++A  +++EM  +
Sbjct: 371 LISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAV 430

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY A I GY +    ++A  LF  M+  G  P+ +T+N ++ A  K G++  A
Sbjct: 431 GCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKA 490

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + + + L +     + D IT  IL+D Y +  D  Q L L  +M  +    D   YNVL
Sbjct: 491 -EGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVL 549

Query: 303 INGFCLNGDI-SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           I       ++ S A A + QML +  +P    +N+L+    + G ++ A      +++ G
Sbjct: 550 IAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKG 609



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 71/144 (49%)

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M + G  ++V T+  LI    + G +  A +L ++M   G  P+V TY  LI   C    
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
            H A+Q    MLR G  PD++TY  LI G C    M +A  V  ++   G A +HI +  
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 547 LKKRYRRMKESDKARDIHQKWLLR 570
           L     R +  D+AR + ++ +LR
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILR 144


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 203/402 (50%), Gaps = 2/402 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            + D R    +++ LCL G++  A+ L  + + +G   D + +  ++N LCKIG    A 
Sbjct: 136 FQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAI 195

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  +M ++R  PN   YN  I G C+   +D+A  L + M  NGI  +  ++N ++H  
Sbjct: 196 QMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGF 255

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C  G    AVK L E++    GK   DV T  IL+D   K G   +A  +   M ++  +
Sbjct: 256 CSVGRFQAAVKLLDEMVV--RGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWK 313

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DIV+YN L+NG+CL+G +  A   F +M++R  LP+VI+Y TL+N  CK   +DEA   
Sbjct: 314 PDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVL 373

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +    + PD ++Y  ++ GL   G  +   + + +M       +   +NV++D Y +
Sbjct: 374 LTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFK 433

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
                 A ++   ++  G+S N+ T+N L+    + G +  A  + + +   G  P++ T
Sbjct: 434 HEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRT 493

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           YN++I   C  G +  A  L  +M+     P+ IT+  +++ 
Sbjct: 494 YNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRA 535



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 190/387 (49%), Gaps = 4/387 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P ++T + L+N   ++G +  A  ++  + +M    +       + G C    + +A+ L
Sbjct: 103 PSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSL 162

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
                + G R + V +  +++ LCK G   DA++   ++      +   ++I    ++D 
Sbjct: 163 LHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKM---KKIRVYPNLIMYNTVIDG 219

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG-FLP 329
             K G   +A  L  +M +  I+ D+ +YN +I+GFC  G   +A     +M+ RG   P
Sbjct: 220 LCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYP 279

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           DV T+N L++ LCK G++ EA +   V+ K G  PD +SY  ++ G C+ G + +A++  
Sbjct: 280 DVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVF 339

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M+E++ +P    +  +I+GY +   +  A  +   M +  +  +  T+N L+   ++ 
Sbjct: 340 DKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKS 399

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G     + L + M   G   D+ TYN+L+           AL L+  ++  GI+P+I TY
Sbjct: 400 GRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTY 459

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLG 536
             L+ G C  G +K A+E+F  +   G
Sbjct: 460 NILLDGLCKSGRLKYAKEIFQLLSAKG 486



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 186/377 (49%), Gaps = 5/377 (1%)

Query: 191 YNAFITGYCRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           +N  ++   ++   +  + L++ + +   I+P+ +T +IL++A  + G +G A   LG +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           L         DV   T LM      G   +A++L ++   +  + D V Y  +ING C  
Sbjct: 132 LKMG---FQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKI 188

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G    A   F +M K    P++I YNT+++ LCKQG +DEA      + + G+  D  SY
Sbjct: 189 GKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSY 248

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKS-VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
            ++I G C  G    A + L  M+ +  V P+ + +N++IDG  + G +S A+++  +M+
Sbjct: 249 NSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMI 308

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G   ++ ++NAL+      GS+ +A  +  +M+     P+V +Y  LI   C +  + 
Sbjct: 309 KRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVD 368

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A+ L  EM  + + PD +TY  L+ G    G      ++   ++  G   D I + +L 
Sbjct: 369 EAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLL 428

Query: 549 KRYRRMKESDKARDIHQ 565
             Y + ++ DKA  + Q
Sbjct: 429 DDYFKHEKFDKALALFQ 445



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 146/279 (52%), Gaps = 15/279 (5%)

Query: 106 DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCK 165
           D   VR  +  D      +I  LC  G++  A  +   MI++G  PD++++N L+N  C 
Sbjct: 269 DEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCL 328

Query: 166 IGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
            G + +A  V  +M E    PN  +Y   I GYC+V  +D+A+ L + M N  + P+ VT
Sbjct: 329 SGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVT 388

Query: 226 HNILVHALCKKGL------LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
           +N L+  L K G       L +A++  G+          +D+IT  +L+D YFK+    +
Sbjct: 389 YNCLLDGLSKSGRSLYEWDLVEAMRASGQ---------PADLITYNVLLDDYFKHEKFDK 439

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           ALAL+  + +  I  +I  YN+L++G C +G +  A   F  +  +G  P++ TYN +++
Sbjct: 440 ALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIH 499

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
            LCK+G LDEA      +      P+ I++ TI++ + +
Sbjct: 500 GLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAILV 538



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 148/286 (51%), Gaps = 5/286 (1%)

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           +  I+  ++ +++LIN F   G +  AF+    +LK GF  DV    TL+  LC +G++ 
Sbjct: 98  KPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVL 157

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA          G   D++ Y TII GLC  G    A +    M +  V P   ++N +I
Sbjct: 158 EAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVI 217

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG-I 467
           DG  + G +  A  +   M+  G+  +V+++N++I      G    A  L  EM++ G +
Sbjct: 218 DGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKV 277

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           +PDV+T+N+LI   C LG +  A  +   M++RG  PDI++Y  L+ G+C  G++ EA++
Sbjct: 278 YPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQ 337

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLL 569
           VF K+       + I +  L   Y +++  D+A     ++H K L+
Sbjct: 338 VFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLV 383



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 5/138 (3%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D ++ MR +G        D   +  ++ D     K   AL L + +I+ G  P++ T+N 
Sbjct: 407 DLVEAMRASGQ-----PADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNI 461

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           L++ LCK G L+ A  + + +S     PN  TYN  I G C+   LD+A  L   M NN 
Sbjct: 462 LLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNN 521

Query: 219 IRPNRVTHNILVHALCKK 236
             PN +T + +V A+  K
Sbjct: 522 YLPNYITFDTIVRAILVK 539


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 191/382 (50%), Gaps = 3/382 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+ +T+  L++ LCK  ++++A+ V+ EM E   SPN  T+++ I G+ +   LDKA   
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   GI PN VT+  L+    K      A++   ++L +  G   +  I  + L++ 
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE--GVKVNKFIVDS-LVNG 493

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             +NG   +A+AL+ D     +  D V Y  LI+G    GD+ +AF +  +++ R  LPD
Sbjct: 494 LRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPD 553

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            + YN  +NCLC  GK  EA  F   +   G+ PDQ +Y T+I   C  G+  KA + L 
Sbjct: 554 AVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLH 613

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M   S+ P    +N ++ G    G +  A  + + M+S G S +  T   ++ A ++  
Sbjct: 614 EMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +     + + M+  G+  D+  YN L+   C  G    A  + +EML  GI PD IT+ 
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFN 733

Query: 511 ELIKGHCARGNMKEAEEVFAKI 532
            LI GHC   ++  A   +A++
Sbjct: 734 ALILGHCKSSHLDNAFATYAQM 755



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 210/440 (47%), Gaps = 7/440 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC    +  A  +  +M +K   P+V+T + ++N   K G L+KA    R M 
Sbjct: 382 YTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   +PN  TY   I G+ +    D AL ++  M   G++ N+   + LV+ L + G + 
Sbjct: 442 ERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIE 501

Query: 241 DAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           +A+     +  D  G   S D +  T L+D  FK GD   A     ++  +N+  D V Y
Sbjct: 502 EAMA----LFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           NV IN  C+ G    A ++  +M   G  PD  TYNT++   C++G+  +A      +  
Sbjct: 558 NVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
           + + P+ I+Y T++ GL   G + KA+  L  M+     P       ++    +   L  
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
              I + M++ G+ +++  +N L+      G    A  + +EML  GI PD  T+N LI 
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C   H+  A   Y +ML + I+P+I T+  L+ G  + G + EA  V  +++  GL  
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 540 DHIPFRILKKRYRRMKESDK 559
           +++ + IL   +   K+S+K
Sbjct: 798 NNLTYDILATGHG--KQSNK 815



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 198/437 (45%), Gaps = 3/437 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G    AL +  +M  +G   DV+ +N LV   C+ G ++ A  V+  M E  
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN ATY  FI  YCR   +++A  L+  M  NG+  + VT + LV  LC+ G   +A 
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+   D   A  + +T   L+DS  K G   + L+L  +M  + +  D+V Y  L+
Sbjct: 295 ALFREM---DKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +     G            L     P+ +TY  L++ LCK   +DEA      + +  ++
Sbjct: 352 DWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSIS 411

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ +++ ++I G    G + KA E+   M E+ + P    +  +IDG+ +      A  +
Sbjct: 412 PNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEV 471

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              ML  GV  N F  ++L+    + G I +A +L K+    G+  D   Y  LI     
Sbjct: 472 YHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFK 531

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A +   E++ R + PD + Y   I   C  G  KEA+    +++ +GL  D   
Sbjct: 532 AGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQST 591

Query: 544 FRILKKRYRRMKESDKA 560
           +  +   + R  E+ KA
Sbjct: 592 YNTMIVSHCRKGETAKA 608



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 173/366 (47%), Gaps = 5/366 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D+  +  +I  L   G + TA    ++++ +  +PD + +N  +N LC +G  ++A 
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             + EM  M   P+ +TYN  I  +CR  E  KAL L   M  + I+PN +T+N LV  L
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD-SYFKNGDKFQALALWNDMFQKNI 292
              G +  A   L E+++   G + S +    +L   S  +  D    +  W  M    +
Sbjct: 635 FGTGAVEKAKYLLNEMVSA--GFSPSSLTHRRVLQACSQSRRLDVILDIHEW--MMNAGL 690

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             DI  YN L+   C +G    A     +ML  G  PD IT+N L+   CK   LD A  
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            Y  +    ++P+  ++ T++ GL   G I +A   L+ M +  + P    ++++  G+G
Sbjct: 751 TYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHG 810

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +  +   A  +   M+  G    V T+NALI   T+ G +  A  L K+M   G+ P   
Sbjct: 811 KQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSC 870

Query: 473 TYNLLI 478
           TY++L+
Sbjct: 871 TYDILV 876



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 197/429 (45%), Gaps = 4/429 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M ++G   D +T N L+  LC+ G ++ A  +      +  + +   +N  I GYCRV 
Sbjct: 125 EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIH-ALDVIGWNTLIAGYCRVG 183

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +   AL +   M   G+  + V +N LV   C+ G + DA + + +++   +     +V 
Sbjct: 184 DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQV-DAARGVLDMM--KEAGVDPNVA 240

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T T  +  Y +     +A  L+  M +  +  D+V  + L+ G C +G  S A+A F +M
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            K G  P+ +TY TL++ L K G+  E     G +   GV  D ++Y  ++  L   G  
Sbjct: 301 DKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKT 360

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            + ++ L   L  ++ P    + V+ID   +  ++  A  +   M    +S NV TF+++
Sbjct: 361 DEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    + G +  A   K+ M   GI P+V TY  LI           AL++Y +ML  G+
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV 480

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             +      L+ G    G ++EA  +F      GL++DH+ +  L     +  +   A  
Sbjct: 481 KVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK 540

Query: 563 IHQKWLLRN 571
             Q+ + RN
Sbjct: 541 FGQELMDRN 549



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 174/393 (44%), Gaps = 3/393 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  L   GKI  A+ L +     G   D + +  L++ L K GD+  A    +E+ + 
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   YN FI   C + +  +A    + M N G++P++ T+N ++ + C+KG    A
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K L E+          ++IT   L+   F  G   +A  L N+M         + +  +
Sbjct: 609 LKLLHEM---KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRV 665

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +     +  +         M+  G   D+  YNTLL  LC  G   +A+     +  +G+
Sbjct: 666 LQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGI 725

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           APD I++  +I G C    +  A      ML +++ P    +N ++ G    G +  A +
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M   G+  N  T++ L     +  +  +A  L  EM+  G  P V TYN LI    
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             G +  A +L+ +M +RG+ P   TY  L+ G
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 159/384 (41%), Gaps = 54/384 (14%)

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           RP+ + A+ NA +  +CR+  L  A+ L  +      RP  V +NIL+ AL         
Sbjct: 69  RPA-DPASLNALLYSHCRLRLLRPAIALLRSS-----RPTTVAYNILLAAL--------- 113

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                            D   A A+  +M ++ +  D V  N L
Sbjct: 114 --------------------------------SDHAHAPAVLAEMCKRGVPFDGVTVNTL 141

Query: 303 INGFCLNGDISSAFAYFCQMLKRG---FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           + G C NG + +A A    +  RG      DVI +NTL+   C+ G    A      ++ 
Sbjct: 142 LAGLCRNGQVDAAAA----LADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTA 197

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+  D + Y T++ G C  G +  AR  L  M E  V P    +   I  Y R   +  
Sbjct: 198 QGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEE 257

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AF + + M+  GV  +V T +AL+    R G   +A++L +EM   G  P+  TY  LI 
Sbjct: 258 AFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLID 317

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           +    G     L L  EM+ RG+  D++TYT L+     +G   E ++      +  L+ 
Sbjct: 318 SLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSP 377

Query: 540 DHIPFRILKKRYRRMKESDKARDI 563
           + + + +L     +    D+A  +
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQV 401



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 36/62 (58%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L  +M+ KG VP V T+N L+++  K G + +A  + ++M +    P   TY+  ++
Sbjct: 818 AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVS 877

Query: 197 GY 198
           G+
Sbjct: 878 GW 879


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 181/376 (48%), Gaps = 4/376 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           SP+  TY+  I G+C+  +  +A  L   M   GI P+   +N ++  LC  G +  A+ 
Sbjct: 30  SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 89

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
                  D        VIT TIL+D+  K+     A  +  DM +     ++V YN LIN
Sbjct: 90  HY----RDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLIN 145

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           GFC  G++  A   F QML+    PDV TYN L++  CKQ +  + +     + K G  P
Sbjct: 146 GFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEP 205

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           + I+Y T++  L   G  + A      ML +   P    +N++ID + + G L  A+ + 
Sbjct: 206 NFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELF 265

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
            LM   G   +++T+N +I    R   I DA  L + M   G  PDV TYN ++   C  
Sbjct: 266 QLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKA 325

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
             +  A ++Y+ +   G   D++T + LI G C    + +AE++  +++  G A D + +
Sbjct: 326 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAY 385

Query: 545 RILKKRYRRMKESDKA 560
            IL   + +  + DK+
Sbjct: 386 TILIHGFCKADQLDKS 401



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 185/379 (48%), Gaps = 4/379 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC  G++ +AL   R M Q+   P V+T+  LV+ LCK   +  A  ++ +M E  
Sbjct: 74  IIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAG 132

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN  TYN  I G+C++  +D+A+ LF+ M  N   P+  T+NIL+   CK+    D  
Sbjct: 133 CAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGA 192

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L E++         + IT   LMDS  K+G    A  L   M +++ +     +N++I
Sbjct: 193 KLLQEMVK---YGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMI 249

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           + FC  G +  A+  F  M  RG LPD+ TYN +++  C+  ++D+A      +++ G  
Sbjct: 250 DMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCP 309

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y +I+ GLC    + +A E    +       +    + +IDG  +   L +A  +
Sbjct: 310 PDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKL 369

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G + +V  +  LI    +   +  + +   EML  G  P V TY+++I   C 
Sbjct: 370 LREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 429

Query: 484 LGHIHLALQLYDEMLRRGI 502
              +     L   ML RG+
Sbjct: 430 SARVRDGCMLLKTMLERGV 448



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 204/412 (49%), Gaps = 7/412 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD +T++ L+N  CK  D ++A  ++ EM +    P+ A YN  I G C    +D AL  
Sbjct: 31  PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           +  M  +   P+ +T+ ILV ALCK   + DA   L +++   +     +V+T   L++ 
Sbjct: 91  YRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMI---EAGCAPNVVTYNTLING 146

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + K G+  +A+ L+N M + +   D+  YN+LI+G+C             +M+K G  P+
Sbjct: 147 FCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 206

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            ITYNTL++ L K GK  +A +   ++ +    P   ++  +I   C  G +  A E   
Sbjct: 207 FITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ 266

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M ++  +P+ + +N++I G  R   + +A  + + M   G   +V T+N+++    +  
Sbjct: 267 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKAS 326

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A+ + + +   G F DV T + LI   C    +  A +L  EM R G  PD++ YT
Sbjct: 327 QVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYT 386

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            LI G C    + ++   F+++   G     I + I+     ++ +S + RD
Sbjct: 387 ILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIV---IDKLCKSARVRD 435



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 173/345 (50%), Gaps = 6/345 (1%)

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           N L+ A  +K    +A       L    G  + D IT + L++ + K  D  QA  L ++
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLC---GLCSPDSITYSTLINGFCKARDFQQAYRLLDE 58

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M ++ I      YN +I G C NG + SA  ++  M +R   P VITY  L++ LCK  +
Sbjct: 59  MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSAR 117

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           + +AS     + + G AP+ ++Y T+I G C  G++ +A      MLE S  P+   +N+
Sbjct: 118 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 177

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +IDGY +     +   +   M+ +G   N  T+N L+ +  + G   DAF+L + ML   
Sbjct: 178 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 237

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             P  FT+NL+I   C +G + LA +L+  M  RG  PDI TY  +I G C    + +A 
Sbjct: 238 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 297

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           ++  ++   G   D + +  +     +  + D+A ++++  +LRN
Sbjct: 298 QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYE--VLRN 340



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 178/377 (47%), Gaps = 13/377 (3%)

Query: 101 LKTMRDTGPVRCTL--ETDYRRHVA--------VIRDLCLGGKIGTALWLRRKMIQKGTV 150
           +K + D G V   L    D +RH A        ++  LC   +I  A  +   MI+ G  
Sbjct: 75  IKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCA 134

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+V+T+N L+N  CK+G++++A  +  +M E   SP+  TYN  I GYC+         L
Sbjct: 135 PNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKL 194

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   G  PN +T+N L+ +L K G   DA   L +++   D K +    T  +++D 
Sbjct: 195 LQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFN-LAQMMLRRDCKPSH--FTFNLMIDM 251

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + K G    A  L+  M  +    DI  YN++I+G C    I  A     +M + G  PD
Sbjct: 252 FCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPD 311

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+TYN++++ LCK  ++DEA   Y VL   G   D ++  T+I GLC    +  A + L 
Sbjct: 312 VVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLR 371

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M      P+   + ++I G+ +   L  + +    ML  G    V T++ +I    +  
Sbjct: 372 EMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 431

Query: 451 SIFDAFSLKKEMLLDGI 467
            + D   L K ML  G+
Sbjct: 432 RVRDGCMLLKTMLERGV 448


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 160/602 (26%), Positives = 262/602 (43%), Gaps = 82/602 (13%)

Query: 7   CGESSSPVHI-QILRFLYQTFDS------IKLNVARIFS-NSRTCSDDDNLPCT------ 52
           CG  +SPV    IL+ L +  +S      ++ ++AR F  +  TC+   N  CT      
Sbjct: 114 CGFKASPVACNSILKALVEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRK 173

Query: 53  LNDIMSYVGDQCRSKTR------HWFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRD 106
             D++  +   C S +       HW+  K     G  +A    L     E+++R      
Sbjct: 174 AEDMLQKMKSCCLSNSATYNTILHWYVKK-----GRFKAALCVL-----EDMERD----- 218

Query: 107 TGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI 166
                 +++ D   +  +I  LC   +   A  L ++M +    PD  T+N L+N     
Sbjct: 219 ------SIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGE 272

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           G +  A  V   M      P+ ATY   I GYCR   +DKAL + S M   G+ P+ +T+
Sbjct: 273 GKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTY 332

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWN 285
           + L++  CK  +LG A+    +++ D   +  T +    TIL+D + + G+  +A  +  
Sbjct: 333 SALLNGYCKVSMLGPAL----DLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILK 388

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M +  I  D+V Y+ LING C    +        +M K G LP+ + Y TL+   CK G
Sbjct: 389 SMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAG 448

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
            +  A   +  + + G+  + + +  +++     G I +A  F   M   ++      +N
Sbjct: 449 YVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFN 508

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF---------------------------- 437
            IID Y   G +  AFS+ D M+ +G S NV                             
Sbjct: 509 CIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDI 568

Query: 438 -------TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
                  TFNAL+L   + G++ +A  + ++M+ +   PD+ TY +L+   C  G I  A
Sbjct: 569 PSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPA 628

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL-GLAIDHIPFRILKK 549
           L +   ML +G+ PD + YT L+ G    G +K A  VF +I    GL  D I +  L  
Sbjct: 629 LVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMN 688

Query: 550 RY 551
            Y
Sbjct: 689 GY 690



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 220/447 (49%), Gaps = 6/447 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  GKI  A  +   M++ G  P+V T+  L+  LC+ G L +A   +  + ++ 
Sbjct: 510 IIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIP 569

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            + +  T+NA + G C+   LD+AL +   M  N   P+  T+ IL+   C+KG +  A+
Sbjct: 570 SAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPAL 629

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF-QKNIQTDIVAYNVL 302
             L  +L   +     D +  T L++     G    A  ++ ++  ++ +  D +AYN L
Sbjct: 630 VMLQMML---EKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSL 686

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +NG+   G++++       M +    P+  +YN L++   K+G+  ++ + Y  + + G+
Sbjct: 687 MNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGI 746

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y+ +I GL   G I  A +FL  M+ + + P+  +++++I  +     + NA  
Sbjct: 747 RPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALR 806

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M    +S +  TF+A+I    R   +  +  +  EML  G+ P+   Y  L+ A C
Sbjct: 807 LFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKC 866

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            +G I  A +L +EM   GI P  +  + +I+G C  G ++EA  VF+ +   G+     
Sbjct: 867 RVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVA 926

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLL 569
            F  L   +   KES  A  +H K L+
Sbjct: 927 TFTTL--MHSLCKESKIADALHLKRLM 951



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 225/487 (46%), Gaps = 24/487 (4%)

Query: 83   PQAV----FNALDL------ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGG 132
            P AV    FNAL L       L E LD  + M     V+     D   +  ++   C  G
Sbjct: 569  PSAVDEKTFNALLLGICKYGTLDEALDICEKM-----VKNNCLPDIHTYTILLSGFCRKG 623

Query: 133  KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM-SEMRPSPNCATY 191
            KI  AL + + M++KG VPD + +  L+N L   G ++ A +V +E+  +     +C  Y
Sbjct: 624  KILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAY 683

Query: 192  NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
            N+ + GY +   ++    + S M  N + PN  ++NIL+H   K+G    ++ +L + + 
Sbjct: 684  NSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSL-YLYKYMV 742

Query: 252  DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                +   D +T  +L+    + G    A+     M  + I  D + +++LI  F     
Sbjct: 743  RKGIRP--DNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSK 800

Query: 312  ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
            + +A   F  M      P   T++ ++N L ++  LD++      + + G+ P+   Y  
Sbjct: 801  MHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIA 860

Query: 372  IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
            ++   C  G+I +A      M    +VP     + II G  RCG L  A  +   M+  G
Sbjct: 861  LVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSG 920

Query: 432  VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
            +   V TF  L+ +  +   I DA  LK+ M L  +  DV +YN+LI   C   HI  AL
Sbjct: 921  MVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDAL 980

Query: 492  QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP-FRILKKR 550
             LY EM  +G+ P++ TY  L     + G M+  EE+   I+  GL    IP F+ L+  
Sbjct: 981  DLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGL----IPAFKQLENL 1036

Query: 551  YRRMKES 557
             RRM+++
Sbjct: 1037 ERRMEDA 1043



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 210/469 (44%), Gaps = 40/469 (8%)

Query: 138 LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
           L+LR  + +K  + DV T N L+N LC  G+  KA+ ++++M     S N ATYN  +  
Sbjct: 141 LFLRESLARKFPL-DVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLS-NSATYNTILHW 198

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
           Y +      AL +   M  + I+ +  T+NI++  LC+      A   L  +  DD    
Sbjct: 199 YVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDD---L 255

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
           T D  T   L++ +F  G    A  ++N M ++ +   +  Y  +I+G+C N  I  A +
Sbjct: 256 TPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALS 315

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
              +M   G +P  +TY+ LLN  CK   L  A      L   G+  ++     +I G C
Sbjct: 316 VLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFC 375

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV----- 432
             G+I KA++ L SMLE  + P+   ++ +I+G  R   +     I   M   G+     
Sbjct: 376 QVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDV 435

Query: 433 ------------------------------SSNVFTFNALILAETRGGSIFDAFSLKKEM 462
                                          +N    NAL+ A  R G I +A   ++ M
Sbjct: 436 LYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYM 495

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
               I  +  ++N +I + C+ G I  A  +YD+M+R G +P++ TY  L++G C  G++
Sbjct: 496 SRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHL 555

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            +A++    +  +  A+D   F  L     +    D+A DI +K +  N
Sbjct: 556 VQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNN 604



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 198/424 (46%), Gaps = 2/424 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC GG +  A      ++   +  D  T N L+  +CK G L++A  +  +M +  
Sbjct: 545 LLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNN 604

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY   ++G+CR  ++  AL +   M   G+ P+ V +  L++ L  +G +  A 
Sbjct: 605 CLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAAS 664

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E++  +   A  D I    LM+ Y K G+      + +DM+Q  +  +  +YN+L+
Sbjct: 665 YVFQEIICKEGLYA--DCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILM 722

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+   G  S +   +  M+++G  PD +TY  L+  L + G +D A  F   +   G+ 
Sbjct: 723 HGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIF 782

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD++ +  +I        +  A      M    + P    ++ +I+G  R   L  +  +
Sbjct: 783 PDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEV 842

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              ML  G+  N   + AL+ A+ R G I  AF LK+EM   GI P     + +I   C 
Sbjct: 843 LHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCR 902

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A+ ++  M+R G+ P + T+T L+   C    + +A  +   ++   L +D + 
Sbjct: 903 CGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVS 962

Query: 544 FRIL 547
           + +L
Sbjct: 963 YNVL 966



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 152/361 (42%), Gaps = 39/361 (10%)

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           N V   +L+ A  K+  + DA   +     DD G   S V  ++IL  +  + G+     
Sbjct: 84  NHVVFELLIKAYVKERKVLDAA--VAVFFMDDCGFKASPVACNSIL-KALVEEGESKYVW 140

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
               +   +    D+   N+L+N  C NG+   A     Q +K   L +  TYNT+L+  
Sbjct: 141 LFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDML-QKMKSCCLSNSATYNTILHWY 199

Query: 342 CKQGKLDEA---------------SHFYGV--------------------LSKTGVAPDQ 366
            K+G+   A                + Y +                    + K  + PD+
Sbjct: 200 VKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDE 259

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
            +Y T+I G    G I  AR     ML +++VP    +  +IDGY R   +  A S+   
Sbjct: 260 CTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSE 319

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M   GV  +  T++AL+    +   +  A  L  ++   GI  +     +LI   C +G 
Sbjct: 320 MEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGE 379

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           I  A Q+   ML  GI PD++TY+ LI G C    M E +E+ +++Q  G+  + + +  
Sbjct: 380 ISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTT 439

Query: 547 L 547
           L
Sbjct: 440 L 440



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 131/311 (42%), Gaps = 1/311 (0%)

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
           +++ +   +L+ +Y K      A      M     +   VA N ++      G+    + 
Sbjct: 82  STNHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWL 141

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
           +  + L R F  DV T N LLN LC  G+  +A      + K+    +  +Y TI+    
Sbjct: 142 FLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM-KSCCLSNSATYNTILHWYV 200

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G    A   L  M   S+  + + +N++ID   R    + AF +   M    ++ +  
Sbjct: 201 KKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDEC 260

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T+N LI      G I  A  +   ML   + P V TY  +I   C    I  AL +  EM
Sbjct: 261 TYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEM 320

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
              G+ P  +TY+ L+ G+C    +  A ++   +++ G+ I+     IL   + ++ E 
Sbjct: 321 EITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEI 380

Query: 558 DKARDIHQKWL 568
            KA+ I +  L
Sbjct: 381 SKAKQILKSML 391


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 226/507 (44%), Gaps = 45/507 (8%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVI-RDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           E L+ L  MR+ G       T     ++++ R L   G  G    L   +++KG  P+  
Sbjct: 236 EALEILSKMREVGV------TPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNF 289

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T N L+ E C+ G     + ++  M + R  P+  +YN  I   C   +   ALHL + M
Sbjct: 290 TFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLM 349

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
             NG +P+  T   ++ A CK+G +  A K+  E+   +D   + + I   I++  Y K 
Sbjct: 350 IENGCKPSIATFCTIIDAFCKEGNVELARKYFDEI---EDMGLSQNTIVYNIMISGYVKA 406

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLING----------------------------- 305
            D  QA  L+ +M  K+I  D + +N L+ G                             
Sbjct: 407 RDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLC 466

Query: 306 ------FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
                  C  G    A      +L +G  P V+ +N+++      G  + A + YG++ K
Sbjct: 467 DVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVK 526

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ P   +  +++  L   G + +A   L  M++K        + V++DGY R G ++ 
Sbjct: 527 FGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNM 586

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A S+ + M   GV  +   F A I      G + DA+ +  +ML  G  P+ F YN LIG
Sbjct: 587 AESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIG 646

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C +G ++ AL+L  EM +RG+ PDI T   +I G C +G MK A E F  +  +GL+ 
Sbjct: 647 GFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSP 706

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQK 566
           D + +  L   Y +  +   A D+  K
Sbjct: 707 DIVTYNTLIDGYCKAFDVGGADDLMMK 733



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 209/422 (49%), Gaps = 4/422 (0%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L R +   G + D    +  V  LC  G  ++A  ++  +      P+   +N+ I  Y 
Sbjct: 450 LLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYG 509

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
                ++A + +  M   G+ P+  T + L+ +L +KG L +A   L +++  D G   +
Sbjct: 510 NAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMI--DKGFPVT 567

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           + +  T+L+D YF+ G    A +LWN+M  + +  D VA+   ING C++G ++ A+  F
Sbjct: 568 N-MAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVF 626

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             ML++GF+P+   YN+L+   CK GKL+EA      ++K G+ PD  +   II GLC  
Sbjct: 627 SDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQ 686

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G +  A E  + M    + P+   +N +IDGY +  D+  A  +   M   G   ++ T+
Sbjct: 687 GRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTY 746

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N  I        I  A  + +E++  GI P+  TYN +I A CN+   H A+ L  ++L+
Sbjct: 747 NIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCNVILDH-AMILTAKLLK 805

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
               P+ +T   L+   C +G  ++A     K+  + L  D    +++ + YR ++E  +
Sbjct: 806 MAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHLDFDETTHKLMNRAYRALEEGGE 865

Query: 560 AR 561
            +
Sbjct: 866 KK 867



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 39/248 (15%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  GK+  AL L R+M ++G +PD+ T N ++  LCK G ++ A     +M  M
Sbjct: 643 SLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRM 702

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SP+  TYN  I GYC+  ++  A  L   M+++G  P+  T+NI +H  C    +  A
Sbjct: 703 GLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRA 762

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V  L E+++                                        I  + V YN +
Sbjct: 763 VMILEELIS--------------------------------------VGIVPNTVTYNTM 784

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           IN  C N  +  A     ++LK  F+P+ +T N LL+  CKQG  ++A  +   LS+  +
Sbjct: 785 INAVC-NVILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHL 843

Query: 363 APDQISYK 370
             D+ ++K
Sbjct: 844 DFDETTHK 851



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 122/302 (40%)

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           SD      LM ++ K+   F+AL + + M +  +  +  A ++L       GD  + +  
Sbjct: 216 SDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKL 275

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           F  ++++G  P+  T+N L+   C++G          V+ K    PD  SY  +I   C+
Sbjct: 276 FGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCL 335

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G    A   L  M+E    P    +  IID + + G++  A    D +   G+S N   
Sbjct: 336 KGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIV 395

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N +I    +   I  A  L +EM    I PD  T+N L+      G      +L  ++ 
Sbjct: 396 YNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLS 455

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             G+  D       + G C  G   EA ++   +   G+    + F  +   Y      +
Sbjct: 456 VSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEE 515

Query: 559 KA 560
           +A
Sbjct: 516 RA 517



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 1/250 (0%)

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           S   A F     R +  D    +TL+    K     EA      + + GV P+  +   +
Sbjct: 200 SKNLAAFMWEGHRVYESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISIL 259

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
            + L   GD     +    ++ K   P    +N++I  + R G      ++  +M  F  
Sbjct: 260 FRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRC 319

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +V+++N +I A    G    A  L   M+ +G  P + T+  +I A C  G++ LA +
Sbjct: 320 EPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARK 379

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL-KKRY 551
            +DE+   G++ + I Y  +I G+    ++ +A  +F +++T  +  D I F  L    Y
Sbjct: 380 YFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHY 439

Query: 552 RRMKESDKAR 561
           R  KE D  R
Sbjct: 440 RYGKEEDGNR 449



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 2/142 (1%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L  D   +  +I   C    +G A  L  KM   G  PD+ T+N  ++  C +  + 
Sbjct: 701 RMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKIN 760

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  ++ E+  +   PN  TYN  I   C V  LD A+ L + +      PN VT N+L+
Sbjct: 761 RAVMILEELISVGIVPNTVTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLL 819

Query: 231 HALCKKGLLGDAVKFLGEVLAD 252
              CK+G+   A+ F G+ L++
Sbjct: 820 SQFCKQGMPEKAI-FWGQKLSE 840


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 178/360 (49%), Gaps = 3/360 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           + ++K   PDV+T+  L+   C    + +A  ++ EM      P+  TYN  + G C+  
Sbjct: 6   RQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEG 65

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            LD+A+   ++M + G +PN +THNI++ ++C  G   DA K L E++       +  V+
Sbjct: 66  RLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKG---CSPSVV 122

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T  IL++   + G   +A+ +   M       + ++YN L++GFC    +  A  Y   M
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           + RG  PD++TYNT+L  LCK GK+D A      LS  G +P  I+Y T+I GL   G  
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A E L  M  K + P+   ++ +I G  R G +  A      +  FGV  N FT+N++
Sbjct: 243 DQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSI 302

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +    +      A      M+  G  P   +Y +LI    N G    AL+L +E+  RG+
Sbjct: 303 MFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 175/352 (49%), Gaps = 3/352 (0%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  TY   I   C  + + +A+ L   M + G +P+ VT+N+LV+ +CK+G L +A+KF
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L  + +     +  +VIT  I++ S    G    A  L  +M +K     +V +N+LIN 
Sbjct: 74  LNSMPSYG---SQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINF 130

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C  G +  A     +M   G  P+ ++YN LL+  CK+ K+D A  +  ++   G  PD
Sbjct: 131 LCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPD 190

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++Y T++  LC  G +  A E L  +  K   P    +N +IDG  + G    A  +  
Sbjct: 191 IVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLH 250

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   G+  +V T+++LI   +R G + +A     ++   G+ P+ FTYN ++   C   
Sbjct: 251 EMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQ 310

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
               A+     M+ +G  P  ++YT LI+G    G  KEA E+  ++ + G+
Sbjct: 311 QTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 150/289 (51%), Gaps = 5/289 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  ++R +C  G+   A  L  +M++KG  P V+T N L+N LC+ G L +A  ++ +M 
Sbjct: 89  HNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMP 148

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               +PN  +YN  + G+C+  ++D+A+     M + G  P+ VT+N ++ ALCK G + 
Sbjct: 149 THGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVD 208

Query: 241 DAVKFLGEVLADDDGKATSDV-ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            AV+ L ++      K  S V IT   ++D   K G   QA+ L ++M  K ++ D++ Y
Sbjct: 209 AAVELLNQL----SSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITY 264

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           + LI G    G +  A  +F  +   G  P+  TYN+++  LCK  + D A  F   +  
Sbjct: 265 SSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMIS 324

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            G  P ++SY  +I+G+   G   +A E L  +  + VV +     V++
Sbjct: 325 KGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 152/303 (50%)

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DVIT TIL+++        QA+ L ++M  +  + D+V YNVL+NG C  G +  A  + 
Sbjct: 15  DVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFL 74

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M   G  P+VIT+N +L  +C  G+  +A      + + G +P  +++  +I  LC  
Sbjct: 75  NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G + +A + L  M      P    +N ++ G+ +   +  A    ++M+S G   ++ T+
Sbjct: 135 GLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTY 194

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N ++ A  + G +  A  L  ++   G  P + TYN +I     +G    A++L  EM  
Sbjct: 195 NTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRG 254

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
           +G+ PD+ITY+ LI G    G ++EA + F  ++  G+  +   +  +     + +++D+
Sbjct: 255 KGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDR 314

Query: 560 ARD 562
           A D
Sbjct: 315 AID 317



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 140/280 (50%)

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           + + +   +K    D++ Y +LI   C    +  A     +M  RG  PDV+TYN L+N 
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           +CK+G+LDEA  F   +   G  P+ I++  I++ +C  G  + A + L  M+ K   P 
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +N++I+   R G L  A  I + M + G + N  ++N L+    +   +  A    +
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            M+  G +PD+ TYN ++ A C  G +  A++L +++  +G +P +ITY  +I G    G
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
              +A E+  +++  GL  D I +  L     R  + ++A
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEA 280



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 115/243 (47%)

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           + L++   PDVITY  L+   C +  + +A      +   G  PD ++Y  ++ G+C  G
Sbjct: 6   RQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEG 65

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            + +A +FL SM      P     N+I+      G   +A  +   M+  G S +V TFN
Sbjct: 66  RLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFN 125

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            LI    R G +  A  + ++M   G  P+  +YN L+   C    +  A+Q  + M+ R
Sbjct: 126 ILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSR 185

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G  PDI+TY  ++   C  G +  A E+  ++ + G +   I +  +     ++ ++D+A
Sbjct: 186 GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 245

Query: 561 RDI 563
            ++
Sbjct: 246 VEL 248



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 63/132 (47%)

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +V T+  LI A      +  A  L  EM   G  PDV TYN+L+   C  G +  A++  
Sbjct: 15  DVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFL 74

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           + M   G  P++IT+  +++  C+ G   +AE++  ++   G +   + F IL     R 
Sbjct: 75  NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134

Query: 555 KESDKARDIHQK 566
               +A DI +K
Sbjct: 135 GLLGRAIDILEK 146


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 204/431 (47%), Gaps = 6/431 (1%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D LK   D     C        +  VI  LC    +  A  +  +M+QKG VPD +T+  
Sbjct: 416 DGLKNFEDMSGSSCV--PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTT 473

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           L++   K   +++A  ++  M    P P   TY + + G+C+++ +++A  + + M   G
Sbjct: 474 LIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERG 533

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
             P       L+     KG   +A + L E+ A        DVI  T L+D  F  G   
Sbjct: 534 CEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG---CAPDVILYTSLIDLLFSTGRVP 590

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A  +++ M +K    D + Y  +I  F   G++ +A      M K G  PD   YN+L+
Sbjct: 591 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 650

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           +   K  ++D+A   Y  +  +G+ P+ +++  ++ GL   G   +A      MLEK  V
Sbjct: 651 DGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEV 710

Query: 399 PEPHI-WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           P   + + ++IDG G+ G +S AFS    M+  G+     T+ +LI +  + G I +A  
Sbjct: 711 PPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKK 770

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L ++M+  G+ PDV  Y+ LI    +   +  A  ++ EM++RG  P+ +TY  L +G  
Sbjct: 771 LVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFR 830

Query: 518 ARGNMKEAEEV 528
           A G   + E V
Sbjct: 831 AAGRALDLEAV 841



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 204/472 (43%), Gaps = 74/472 (15%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           DV+++  ++  L     +++A  +  ++     SPN   Y A I G  +   ++  L  F
Sbjct: 362 DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF 421

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M+ +   P R T+ +++  LCK  +L DA K   +++         D IT T L+D +
Sbjct: 422 EDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG---CVPDTITYTTLIDGF 478

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC------------------------ 307
            K     +A  L + M  K  +   V Y  +++GFC                        
Sbjct: 479 SKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGL 538

Query: 308 -----------LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
                        G    A+    +M  RG  PDVI Y +L++ L   G++ EA H +  
Sbjct: 539 FIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDS 598

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + + G APD ++Y TIIQ     G++  A E L  M +  V P+   +N ++DGY +   
Sbjct: 599 MIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLER 658

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML------------- 463
           +  AF + D M++ G+  N  TFN L+    + G    AFSL KEML             
Sbjct: 659 VDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYT 718

Query: 464 ----------------------LD-GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
                                 +D GI P+  TY  LI +    G I  A +L ++M++ 
Sbjct: 719 ILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKL 778

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           G+ PD+  Y+ LI G      +  A +VF ++   G A + + +++L++ +R
Sbjct: 779 GVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFR 830



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/492 (24%), Positives = 220/492 (44%), Gaps = 30/492 (6%)

Query: 111 RCTLETDYRRHVAV----IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI 166
           R  +E  Y  ++ V    I  LC  GK+  A  + + ++ K      + +N L++  CK+
Sbjct: 218 REMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKL 277

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           G ++    ++ +M E    P+  TYN  + G+ R N LD AL LF  +++ G +PN  T+
Sbjct: 278 GRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATY 337

Query: 227 NILVHALCKKGLLGDAVKFLGEVL------------ADDD--------------GKATSD 260
             ++  L     + +A  F  E L            AD                   + +
Sbjct: 338 TTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPN 397

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           V+  T ++D   K G     L  + DM   +       Y V+I+G C    +  A   F 
Sbjct: 398 VVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFE 457

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           QM+++G +PD ITY TL++   K  K+DEA     V+   G  P  ++Y +I+ G C   
Sbjct: 458 QMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLD 517

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            I +A+E +  M E+   P   I+  ++  Y   G    A+ +   M + G + +V  + 
Sbjct: 518 MINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYT 577

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           +LI      G + +A  +   M+  G  PD  TY  +I     +G++  A ++ + M + 
Sbjct: 578 SLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKS 637

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G+ PD   Y  L+ G+     + +A  V+ ++   G+  + + F +L     +  ++D+A
Sbjct: 638 GVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRA 697

Query: 561 RDIHQKWLLRNK 572
             + ++ L +++
Sbjct: 698 FSLFKEMLEKDE 709



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 192/408 (47%), Gaps = 10/408 (2%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL   ++M   G +PDV+  N ++N LCK   ++KA  +  EM  M   P   +YN  I+
Sbjct: 4   ALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVIS 63

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G   ++++D+A   F++M +NG  P+ +    L+H  CK G        L + L     +
Sbjct: 64  GLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK----R 119

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              DV   T ++  Y K GD      +  +M       D  AY VLI+  C  G +  A+
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F +M K G L D +T+ TL+  L   GKLDEA   Y  + + G  P      ++I  L
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G + +A E   +++ K V      +N ++DGY + G + +   +   M+      ++
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+N L+   +R   + DA  L K +   G  P+  TY  +I    +   +  A   +DE
Sbjct: 300 QTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE 359

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            L      D+I+YT +IKG      + EA E+F K++T G + + + +
Sbjct: 360 AL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAY 401



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/508 (24%), Positives = 216/508 (42%), Gaps = 49/508 (9%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E  +  + MR +G +      DY   + +I  L   GK+  A  L R+MI++G  P +  
Sbjct: 177 EAYELFERMRKSGCL-----GDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEV 231

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC---------------- 199
            + L+  LCK G +++A+ + + +   + + +   YN+ + GYC                
Sbjct: 232 QDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMV 291

Query: 200 -------------------RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                              R N LD AL LF  +++ G +PN  T+  ++  L     + 
Sbjct: 292 ECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRME 351

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A  F  E L         DVI+ T ++     +    +A  L+  +       ++VAY 
Sbjct: 352 EAKAFFDEAL---------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYT 402

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I+G    G I      F  M     +P   TY  +++ LCK   L +A   +  + + 
Sbjct: 403 AVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQK 462

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  PD I+Y T+I G      + +AR+ L  ML K   P    +  I+ G+ +   ++ A
Sbjct: 463 GCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEA 522

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +   M   G    +F F +L+      G   +A+ +  EM   G  PDV  Y  LI  
Sbjct: 523 KEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDL 582

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             + G +  A  ++D M+ +G  PD +TY  +I+     GN++ A E+   +   G+  D
Sbjct: 583 LFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPD 642

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWL 568
              +  L   Y +++  D+A  ++ + +
Sbjct: 643 CFAYNSLMDGYVKLERVDQAFGVYDRMV 670



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 192/398 (48%), Gaps = 10/398 (2%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           +E+A   ++EM      P+    N  + G C+  ++DKA+ LF  M + G  P  V++N 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++  L     + +A KF   ++   D     DVI  T L+  + K G       L N   
Sbjct: 61  VISGLASIDKMDEAYKFFNSMI---DNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL 117

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            K  + D+  Y  +I+G+C  GD+ + F    +ML  G +PD   Y  L++ LCK G++D
Sbjct: 118 -KRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVD 176

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA   +  + K+G   D +++ T+I+ L  HG + +A E    M+E+   P   + + +I
Sbjct: 177 EAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLI 236

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
               + G +  A  I   +++  V+++   +N+L+    + G + D   L  +M+    F
Sbjct: 237 FALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNF 296

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PD+ TYN+L+        +  AL+L+  +   G  P+  TYT +I+G      M+EA+  
Sbjct: 297 PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF 356

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           F +      A+D I +  + K     K  D+A ++ +K
Sbjct: 357 FDE------ALDVISYTTVIKGLADSKRIDEACELFEK 388



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 192/456 (42%), Gaps = 32/456 (7%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + +VI   C  G + T   +  +M+  G +PD   +  L++ LCK+G +++A  +   M 
Sbjct: 127 YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMR 186

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +     +  T+   I       +LD+A  L+  M   G  P     + L+ ALCK G + 
Sbjct: 187 KSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVD 246

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +    V+A    K  +  +    LMD Y K G     L L   M + +   DI  YN
Sbjct: 247 EANEIYQTVVAK---KVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYN 303

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLP-----------------------------DV 331
           +L+ GF     +  A   F  +   G  P                             DV
Sbjct: 304 ILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDV 363

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           I+Y T++  L    ++DEA   +  L   G +P+ ++Y  +I GL   G I    +    
Sbjct: 364 ISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFED 423

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M   S VP    + V+IDG  +   L +A  + + M+  G   +  T+  LI   ++   
Sbjct: 424 MSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASK 483

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + +A  L   ML  G  P   TY  ++   C L  I+ A ++  +M  RG  P +  +T 
Sbjct: 484 MDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTS 543

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           L+  + ++G  +EA +V  ++   G A D I +  L
Sbjct: 544 LLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSL 579



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 192/445 (43%), Gaps = 39/445 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  L    K+  A      MI  G  PDV+    L++  CK G   +  H++   +  R
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKR 119

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC--------- 234
             P+   Y + I GYC+  +LD    +   M   G  P+   + +L+  LC         
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 235 -------KKGLLGDAVKFLGEVLA-------DDDGKATSDVI---------TSTILMDSY 271
                  K G LGD V F+  + A       D+  +   ++I             L+ + 
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K G   +A  ++  +  K + T  VAYN L++G+C  G +        QM++    PD+
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            TYN L+    +  +LD+A   + +LS  G  P+  +Y TIIQGL     + +A+ F   
Sbjct: 300 QTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE 359

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
            L+  V+     +  +I G      +  A  + + + + G S NV  + A+I    + G 
Sbjct: 360 ALD--VIS----YTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGR 413

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           I D     ++M      P   TY ++I   C    +  A +++++M+++G  PD ITYT 
Sbjct: 414 IEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTT 473

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLG 536
           LI G      M EA ++   + T G
Sbjct: 474 LIDGFSKASKMDEARKLLDVMLTKG 498



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 109/251 (43%), Gaps = 36/251 (14%)

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +M   G +PDV+  N +LN LCK  K+D+A   +  +   G  P  +SY T+I GL    
Sbjct: 10  EMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASID 69

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            + +A +F  SM++    P+   +  +I G+ + G                         
Sbjct: 70  KMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAG------------------------- 104

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
                + + G +    +LK+        PDVF Y  +I   C  G +    ++ +EML  
Sbjct: 105 -----QPQVGHMLLNQALKR------FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAA 153

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G  PD   Y  LI   C  G + EA E+F +++  G   D++ F  L +      + D+A
Sbjct: 154 GCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEA 213

Query: 561 RDIHQKWLLRN 571
            +++++ + R 
Sbjct: 214 CELYREMIERG 224


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 215/442 (48%), Gaps = 5/442 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L+ L  M D+    C    +   +  VI      G++  A  L  +M+ +G  P+V+
Sbjct: 182 EEALELLHMMADSQGRSC--PPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVV 239

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  +++ LCK   +++A+ V ++M +    P+  TYN  I GY  + +  + + +   M
Sbjct: 240 TYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM 299

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
           + +G++P+  T+  L++ LC  G   +A +FL + +     K   +V    IL+  Y   
Sbjct: 300 SAHGLKPDCYTYGSLLNYLCNNGRCREA-RFLFDSMIRKGIKP--NVAIYGILIHGYATK 356

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +   L N M +  +  D   +N++   +     I  A   F +M ++G  PDV+ Y
Sbjct: 357 GALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNY 416

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
             L++ LCK G++D+A   +  +   GVAP+   + +++ GLC      KA+EF   ML 
Sbjct: 417 GALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLN 476

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           + + P+   +N I+      G +  A  + DLM   G    V ++  LI      G I +
Sbjct: 477 QGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDE 536

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A      ML  G+ PD +TYN L+   C  G I  A  ++ EMLR GITP ++TY+ ++ 
Sbjct: 537 AAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILH 596

Query: 515 GHCARGNMKEAEEVFAKIQTLG 536
           G        EA+E++  + T G
Sbjct: 597 GLFTTRRFSEAKELYLNMITSG 618



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 204/427 (47%), Gaps = 3/427 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  VI  LC    +  A  + ++MI KG  PD  T+N L++    IG  ++   ++ EMS
Sbjct: 241 YTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMS 300

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+C TY + +   C      +A  LF +M   GI+PN   + IL+H    KG L 
Sbjct: 301 AHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALS 360

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +    L   L  ++G +    I + I+  +Y K     +A+ ++N M Q+ +  D+V Y 
Sbjct: 361 EMHDLLN--LMVENGLSPDHHIFN-IIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYG 417

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+  C  G +  A   F QM+  G  P++  +N+L+  LC   K ++A  FY  +   
Sbjct: 418 ALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ 477

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ PD + + TI+  LC  G ++KA+  +  M      P    +  +I G+   G +  A
Sbjct: 478 GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEA 537

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
               D+MLS G+  + +T+N L+    R G I DA+ + +EML +GI P V TY+ ++  
Sbjct: 538 AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHG 597

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
                    A +LY  M+  G   +I  Y  ++ G      + EA ++F  + +    ++
Sbjct: 598 LFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657

Query: 541 HIPFRIL 547
              F I+
Sbjct: 658 ITTFNIM 664



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 202/410 (49%), Gaps = 6/410 (1%)

Query: 140 LRRKMIQKGTV---PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           L  +MI++ T+   PD  T++ L+   C++G LE        + +     N    N  + 
Sbjct: 78  LFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLK 137

Query: 197 GYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
           G C    L +A+  L   M   G  P+ V++N L+   C +    +A++ L  ++AD  G
Sbjct: 138 GLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELL-HMMADSQG 196

Query: 256 KA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           ++   +V++  I+++ +F  G   +A  L+ +M  + IQ ++V Y  +I+G C    +  
Sbjct: 197 RSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDR 256

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A   F QM+ +G  PD  TYN L++     GK  E       +S  G+ PD  +Y +++ 
Sbjct: 257 AEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLN 316

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
            LC +G   +AR    SM+ K + P   I+ ++I GY   G LS    + +LM+  G+S 
Sbjct: 317 YLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSP 376

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +   FN +  A  +   I +A  +  +M   G+ PDV  Y  LI A C LG +  A+  +
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKF 436

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           ++M+  G+ P+I  +  L+ G C     ++A+E + ++   G+  D + F
Sbjct: 437 NQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 205/454 (45%), Gaps = 43/454 (9%)

Query: 157 NYLVNELCKIGDL-EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           N L+  LC    L E  D +++ M E+  +P+  +YN  + G+C     ++AL L   MA
Sbjct: 133 NQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMA 192

Query: 216 NNGIR---PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
           ++  R   PN V++ I+++    +G +  A     E++   D     +V+T T ++D   
Sbjct: 193 DSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMM---DRGIQPNVVTYTTVIDGLC 249

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K     +A  ++  M  K ++ D   YN LI+G+   G          +M   G  PD  
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCY 309

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TY +LLN LC  G+  EA   +  + + G+ P+   Y  +I G    G + +  + L  M
Sbjct: 310 TYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLM 369

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +E  + P+ HI+N+I   Y +   +  A  I + M   G+S +V  + ALI A  + G +
Sbjct: 370 VENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRV 429

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD------- 505
            DA     +M+ +G+ P++F +N L+   C +     A + Y EML +GI PD       
Sbjct: 430 DDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTI 489

Query: 506 ----------------------------IITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
                                       +I+YT LI GHC  G + EA +    + ++GL
Sbjct: 490 LCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGL 549

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             D   +  L   Y R    D A  + ++ +LRN
Sbjct: 550 KPDEWTYNTLLHGYCRAGRIDDAYGVFRE-MLRN 582



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 196/429 (45%), Gaps = 3/429 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++ G  PD    N +     K   +++A H+  +M +   SP+   Y A I   C++  
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGR 428

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A+  F+ M N G+ PN    N LV+ LC       A +F  E+L  + G     V  
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEML--NQGIRPDVVFF 486

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           +TIL +   K G   +A  L + M +   +  +++Y  LI G CL G I  A      ML
Sbjct: 487 NTILCNLCTK-GQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVML 545

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  PD  TYNTLL+  C+ G++D+A   +  + + G+ P  ++Y TI+ GL       
Sbjct: 546 SVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFS 605

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A+E  L+M+         I+N+I++G  +   +  AF +   + S      + TFN +I
Sbjct: 606 EAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMI 665

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            A  + G   DA  L   +   G+ PDVFTY L+       G++     L+  M + G T
Sbjct: 666 GALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTT 725

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P+      L++    RG++  A     K+     +++     +L     R +    A  +
Sbjct: 726 PNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785

Query: 564 HQKWLLRNK 572
            +K+ + N+
Sbjct: 786 PEKYRVLNE 794



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 7/239 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  ++   C  G+I  A  + R+M++ G  P V+T++ +++ L       +A 
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAK 608

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M       N   YN  + G  + N +D+A  LF ++ +   +    T NI++ AL
Sbjct: 609 ELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGAL 668

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K G   DA+     +          DV T  ++ ++  + G   +   L++ M +    
Sbjct: 669 FKSGRNEDAMHLFATI---SSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTT 725

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
            +    N L+      GDI+ A AY C++ ++ F  +  T   L++ L +    DE  H
Sbjct: 726 PNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSR----DEYHH 780


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 222/474 (46%), Gaps = 22/474 (4%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  +I  LC   +   A  L ++M +    PD  ++N L++     G +  A 
Sbjct: 295 IEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAI 354

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN------ 227
           ++  +M      P+ ATY A I GYCR    D+A  +   M   G+RP  V+        
Sbjct: 355 YIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKC 414

Query: 228 ----------ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
                     I   AL  +G++ +A +F   +      K + DV +   ++DSY + G+ 
Sbjct: 415 MLADGIDPDVITYSALINEGMIAEAEQFKQYM---SRMKISFDVASFNCIIDSYCQRGNV 471

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +A +++++M +     DI  Y  L+ G C  G +  A  +   +L++    D  T NTL
Sbjct: 472 LEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTL 531

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           L  +CK G LDEA      +    + PD  +Y  ++ G C  G +V A   L  MLEK +
Sbjct: 532 LVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGL 591

Query: 398 VPEPHIWNVIIDGYGRCGDLSNA-FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           VP+   +  +++G    G +  A +  ++++   G+ ++   +N+++    +GG I +  
Sbjct: 592 VPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIE 651

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L + M  + ++P   +YN+L+      G +   L LY +M++ GI PD +TY  LI G 
Sbjct: 652 RLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGL 711

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI--HQKWL 568
           C  G ++ A +   K+   G+  D++ F IL K +    +   A  +  + KWL
Sbjct: 712 CEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWL 765



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 213/434 (49%), Gaps = 8/434 (1%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           ++  A  + + M+  G  PDV+T++ L+NE    G + +A+   + MS M+ S + A++N
Sbjct: 404 EVSKAKQILKCMLADGIDPDVITYSALINE----GMIAEAEQFKQYMSRMKISFDVASFN 459

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I  YC+   + +A  ++  M  +G  P+  T+  L+  LC+ G L  A +F+  +L  
Sbjct: 460 CIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLL-- 517

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
            +     D  T   L+    K+G   +AL L   M  +NI  D   Y +L++GFC  G +
Sbjct: 518 -EKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKV 576

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH-FYGVLSKTGVAPDQISYKT 371
             A      ML++G +PD I Y  LLN L  +G++  AS+ F  ++ K G+  D I+Y +
Sbjct: 577 VPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNS 636

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++ G    G I +    + +M E  V P    +N+++ GY + G LS    +   M+  G
Sbjct: 637 MMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEG 696

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  +  T+  LI      G I  A    ++M+L+G+FPD   +++LI A      +  AL
Sbjct: 697 IKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNAL 756

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           QL+  M    ++P   TY  ++ G   +  ++++ E+   +   GL   H  +  L    
Sbjct: 757 QLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAK 816

Query: 552 RRMKESDKARDIHQ 565
            R+ + D A ++ +
Sbjct: 817 CRVGDIDGAFELKE 830



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 208/445 (46%), Gaps = 15/445 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
            K+ + R+K   D     C           +I   C  G +  A  +   M++ G  PD+
Sbjct: 442 FKQYMSRMKISFDVASFNC-----------IIDSYCQRGNVLEAFSVYDNMVRHGWPPDI 490

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+  L+  LC+ G L +A   +  + E   + +  T N  + G C+   LD+AL L   
Sbjct: 491 CTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEK 550

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M    I P+  T+ IL+   CK+G +  A+  L  +L   +     D I  T L++    
Sbjct: 551 MVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMML---EKGLVPDTIAYTCLLNGLVN 607

Query: 274 NGDKFQALALWNDMF-QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
            G    A  ++ ++  ++ +  D +AYN ++NG+   G I+        M +    P   
Sbjct: 608 EGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSA 667

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           +YN L++   K+G+L    + Y  + K G+ PD ++Y+ +I GLC +G I  A +FL  M
Sbjct: 668 SYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKM 727

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           + + V P+   ++++I  +     +SNA  +   M    +S +  T+ A++    R   +
Sbjct: 728 VLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWL 787

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             ++ +  +M+  G+ P    Y  LI A C +G I  A +L ++M   G+ P  +  + +
Sbjct: 788 QQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSI 847

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGL 537
           ++G C  G ++EA  VF+ I   G+
Sbjct: 848 VRGLCKCGKVEEAIIVFSSIMRAGM 872



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 199/422 (47%), Gaps = 4/422 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++   C  GK+  AL L + M++KG VPD + +  L+N L   G ++ A ++ 
Sbjct: 559 DTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMF 618

Query: 177 REM-SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           +E+  +     +C  YN+ + GY +  ++++   L   M  N + P+  ++NIL+H   K
Sbjct: 619 QEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIK 678

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
           KG L   +    +++ +       D +T  +L+    + G    A+     M  + +  D
Sbjct: 679 KGQLSRTLYLYRDMVKEG---IKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPD 735

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
            +A+++LI  F     +S+A   F  M      P   TY  ++N L ++  L ++     
Sbjct: 736 NLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILH 795

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + ++G+ P    Y  +I   C  GDI  A E    M    VVP     + I+ G  +CG
Sbjct: 796 DMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCG 855

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            +  A  +   ++  G+   + TF  L+    +   I DAF LK+ M   G+  DV TYN
Sbjct: 856 KVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYN 915

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           +LI   CN   I  AL LY+EM  +G+ P+I TY  L     A G M++ E++   I+  
Sbjct: 916 VLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDR 975

Query: 536 GL 537
           G+
Sbjct: 976 GI 977



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 203/438 (46%), Gaps = 2/438 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR     D   + +++R LC GG +  A      +++K    D  T N L+  +CK G L
Sbjct: 482 VRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTL 541

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  +  +M      P+  TY   + G+C+  ++  AL L   M   G+ P+ + +  L
Sbjct: 542 DEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCL 601

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           ++ L  +G +  A     E++  +   A  D I    +M+ Y K G   +   L  +M +
Sbjct: 602 LNGLVNEGQVKAASYMFQEIICKEGLYA--DCIAYNSMMNGYLKGGQINEIERLMRNMHE 659

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             +     +YN+L++G+   G +S     +  M+K G  PD +TY  L+  LC+ G ++ 
Sbjct: 660 NEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEI 719

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A  F   +   GV PD +++  +I+       +  A +    M    + P    +  +++
Sbjct: 720 AVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVN 779

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  R   L  ++ I   M+  G+      + ALI A+ R G I  AF LK++M   G+ P
Sbjct: 780 GLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVP 839

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
                + ++   C  G +  A+ ++  ++R G+ P I T+T L+ G C    + +A  + 
Sbjct: 840 SEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLK 899

Query: 530 AKIQTLGLAIDHIPFRIL 547
             +++ GL +D + + +L
Sbjct: 900 QLMESCGLKVDVVTYNVL 917



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 187/375 (49%), Gaps = 4/375 (1%)

Query: 132 GKIGTALWLRRKMI-QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           G++  A ++ +++I ++G   D + +N ++N   K G + + + ++R M E    P+ A+
Sbjct: 609 GQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSAS 668

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  + GY +  +L + L+L+  M   GI+P+ VT+ +L+  LC+ GL+  AVKFL +++
Sbjct: 669 YNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMV 728

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
            +       D +   IL+ ++ +      AL L++ M   ++      Y  ++NG     
Sbjct: 729 LEG---VFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKN 785

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  ++     M++ G  P    Y  L+N  C+ G +D A      +   GV P +++  
Sbjct: 786 WLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAES 845

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           +I++GLC  G + +A     S++   +VP    +  ++ G  +   + +AF ++ LM S 
Sbjct: 846 SIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESC 905

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+  +V T+N LI        I DA  L +EM   G+ P++ TY  L GA    G +   
Sbjct: 906 GLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDG 965

Query: 491 LQLYDEMLRRGITPD 505
            +L  ++  RGI P 
Sbjct: 966 EKLLKDIEDRGIVPS 980



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 170/405 (41%), Gaps = 63/405 (15%)

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           N  + ++LV+A  K+G + DA   +     D+ G   S    + IL      N  ++  L
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAI--FFMDECGFKASLFSCNNILNALVGINKSEYVWL 216

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            L  +   +    D+   N+++N  C  G +S A +   Q +K   LP+ +TYNT+LN  
Sbjct: 217 FL-KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESML-QKMKNCRLPNAVTYNTILNWY 274

Query: 342 CKQGKLDEASHFYGVLSKTGV-----------------------------------APDQ 366
            K+G+   A      + K G+                                    PD+
Sbjct: 275 VKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDE 334

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG----------- 415
            SY T+I G    G I  A      ML +S+ P    +  +IDGY R G           
Sbjct: 335 CSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYE 394

Query: 416 ---------DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
                    ++S A  I   ML+ G+  +V T++ALI      G I +A   K+ M    
Sbjct: 395 MQITGVRPREVSKAKQILKCMLADGIDPDVITYSALI----NEGMIAEAEQFKQYMSRMK 450

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           I  DV ++N +I + C  G++  A  +YD M+R G  PDI TY  L++G C  G++ +A+
Sbjct: 451 ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAK 510

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           E    +     AID      L     +    D+A D+ +K + RN
Sbjct: 511 EFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRN 555



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 5/156 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L+++ + L  M ++G     L+  +  ++A+I   C  G I  A  L+  M   G VP  
Sbjct: 787 LQQSYEILHDMVESG-----LQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSE 841

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +  + +V  LCK G +E+A  V   +      P  AT+   + G C+  ++D A HL   
Sbjct: 842 VAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQL 901

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           M + G++ + VT+N+L+  LC K  + DA+    E+
Sbjct: 902 MESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEM 937



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 36/260 (13%)

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           S+ F+   + + R    ++ + + L+N   K+GK+ +A+     + + G      S   I
Sbjct: 142 SAIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNI 201

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           +  L           FL   L++    +    N++++     G LS A S+   M +  +
Sbjct: 202 LNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL 261

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL-------- 484
             N  T+N ++    + G    A  +  +M  +GI  D++TYN++I   C L        
Sbjct: 262 P-NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYL 320

Query: 485 ---------------------------GHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
                                      G I+LA+ ++++MLR+ + P + TYT LI G+C
Sbjct: 321 LLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYC 380

Query: 518 ARGNMKEAEEVFAKIQTLGL 537
             G   EA  V  ++Q  G+
Sbjct: 381 RNGRTDEARRVLYEMQITGV 400


>gi|449449098|ref|XP_004142302.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
 gi|449521427|ref|XP_004167731.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
          Length = 585

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 193/378 (51%), Gaps = 8/378 (2%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           ++ K  +P ++T+   V+  CK+GD++  + +  +M ++   PN   +++ I GYC+   
Sbjct: 152 LMWKYCLPSIVTYGTFVDMFCKMGDMKMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGS 211

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           LD A   F  M    +RPN  T++ L+    K G+L  A     ++L+        +   
Sbjct: 212 LDVAFEYFERMKECSVRPNEFTYSTLIDGCSKHGMLARADSLFEKMLS---ASILPNCTV 268

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            T ++D +FK G+   A+   N MF ++I+ D+ AY V+I+GF   G    +      + 
Sbjct: 269 YTSIIDGHFKKGNVDDAIKYINQMFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVA 328

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           K G LPD I    +++   K G + EA + Y +L   G   D ++   ++ GL  HG + 
Sbjct: 329 KNGLLPDRIILTAIMDVHFKAGNIKEALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQ 388

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +AR +L+      +     ++ V ID   + G+L +A  +   M   G   + F + + I
Sbjct: 389 EARRYLVKENANEI-----LYTVFIDALCKEGNLDDAEKMIKEMSEAGFVPDKFVYTSWI 443

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G++  AF +KK M+ + + PD+ TY+ LIG     G +  A Q++D+ML +GIT
Sbjct: 444 AELCKQGNLLKAFMVKKRMVQEHVEPDLLTYSSLIGGLAEKGLMIEAKQVFDDMLNKGIT 503

Query: 504 PDIITYTELIKGHCARGN 521
           PD ++Y  LI+G+  +GN
Sbjct: 504 PDFVSYDILIRGYHNQGN 521



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/525 (24%), Positives = 225/525 (42%), Gaps = 75/525 (14%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           ++KE L  L  +R T         +   H ++I   C  G +   L      + KG  P 
Sbjct: 1   MVKEALQYLAHLRRTFRFPTPFTCNKLLH-SLINSGC--GHLSAKLLFH--FLSKGYTPH 55

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
             + N +++  C+ G+++ A+H+   MS    SP+  +YN+ + GYC   ++ KA  L +
Sbjct: 56  PSSFNSIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVN 115

Query: 213 TMANNGI-RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
            +    + RP+ V  NIL +   K  +  +A  + G +           ++T    +D +
Sbjct: 116 RVRGCELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWK----YCLPSIVTYGTFVDMF 171

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K GD      ++ DM +  I  ++V ++ LI+G+C  G +  AF YF +M +    P+ 
Sbjct: 172 CKMGDMKMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNE 231

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            TY+TL++   K G L  A   +  +    + P+   Y +II G    G++  A +++  
Sbjct: 232 FTYSTLIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQ 291

Query: 392 MLEKSVVPEPHIWNVIIDGYGR-----------------------------------CGD 416
           M ++ +  +   + VII G+ R                                    G+
Sbjct: 292 MFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGN 351

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALI--------LAETR-------------------- 448
           +  A +   ++L+ G  ++V T +AL+        L E R                    
Sbjct: 352 IKEALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANEILYTVFIDAL 411

Query: 449 --GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G++ DA  + KEM   G  PD F Y   I   C  G++  A  +   M++  + PD+
Sbjct: 412 CKEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEHVEPDL 471

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +TY+ LI G   +G M EA++VF  +   G+  D + + IL + Y
Sbjct: 472 LTYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGY 516



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 158/336 (47%), Gaps = 11/336 (3%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
            C++  +   +  +I      G +  A  L  KM+    +P+   +  +++   K G+++
Sbjct: 224 ECSVRPNEFTYSTLIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVD 283

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A   I +M +     +   Y   I+G+ RV   DK++     +A NG+ P+R+    ++
Sbjct: 284 DAIKYINQMFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIM 343

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
               K G + +A+     +LA       +DV+T + LMD   K+G   +A      + ++
Sbjct: 344 DVHFKAGNIKEALNAYKILLAKG---FEADVVTLSALMDGLSKHGYLQEARRY---LVKE 397

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
           N   + + Y V I+  C  G++  A     +M + GF+PD   Y + +  LCKQG L +A
Sbjct: 398 N--ANEILYTVFIDALCKEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKA 455

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                 + +  V PD ++Y ++I GL   G +++A++    ML K + P+   ++++I G
Sbjct: 456 FMVKKRMVQEHVEPDLLTYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRG 515

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           Y   G   N  +I D +L    S N+ +   + L E
Sbjct: 516 YHNQG---NGAAISDFVLIILSSCNIRSAKWMALFE 548



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 127/267 (47%), Gaps = 4/267 (1%)

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
           ++N +I+ FC +G++  A   F  M + G  PD+++YN+LL+  C   ++ +A      +
Sbjct: 58  SFNSIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRV 117

Query: 358 SKTGV-APDQISYKTIIQGLCIHGDIVKAREFL-LSMLEKSVVPEPHIWNVIIDGYGRCG 415
               +  PD + +  +  G       +K   F+   ++ K  +P    +   +D + + G
Sbjct: 118 RGCELNRPDLVMFNILFNGFA--KVYMKNEAFMYFGLMWKYCLPSIVTYGTFVDMFCKMG 175

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
           D+     +   M+  G+  N+  F++LI    + GS+  AF   + M    + P+ FTY+
Sbjct: 176 DMKMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYS 235

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            LI      G +  A  L+++ML   I P+   YT +I GH  +GN+ +A +   ++   
Sbjct: 236 TLIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDR 295

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARD 562
            + +D   + ++   + R+   DK+ +
Sbjct: 296 DIKLDLTAYTVIISGFHRVGRFDKSME 322



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 44/93 (47%)

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           FP  FT N L+ +  N G  HL+ +L    L +G TP   ++  +I   C  GN+K AE 
Sbjct: 18  FPTPFTCNKLLHSLINSGCGHLSAKLLFHFLSKGYTPHPSSFNSIISFFCRSGNVKFAEH 77

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           +F  +   G + D + +  L   Y    +  KA
Sbjct: 78  IFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKA 110


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 215/436 (49%), Gaps = 5/436 (1%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T + L ++    G  PD+ T + L+N  C    +  A  V   + +    PN  T N  I
Sbjct: 75  TVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLI 134

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   E+ KAL+    +   G + ++V++  L++ LCK G      K +  +L   +G
Sbjct: 135 KGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTG----ETKAVARLLRKLEG 190

Query: 256 KAT-SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
            +   DV+    +++S  KN     A  ++++M  K I  D+V Y  LI+GFC+ G +  
Sbjct: 191 HSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKE 250

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           AF+   +M  +   P+V T+N L++ L K+GK+ EA     V+ K  + PD  +Y ++I 
Sbjct: 251 AFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLID 310

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G  +  ++  A+    SM ++ V P+   +  +I+G  +   +  A S+ + M    +  
Sbjct: 311 GYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIP 370

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           ++ T+N+LI    +   +  A +L K M   GI PDV++Y +L+   C  G +  A +++
Sbjct: 371 DIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIF 430

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
             +L +G   ++  YT LI   C  G   EA ++ +K++  G   D + F I+ +     
Sbjct: 431 QRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEK 490

Query: 555 KESDKARDIHQKWLLR 570
            E+DKA  I ++ + R
Sbjct: 491 DENDKAEKILREMIAR 506



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 202/429 (47%), Gaps = 10/429 (2%)

Query: 109 PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           P  CTL         +I   C    I  A  +   ++++G  P+ +T N L+  LC  G+
Sbjct: 90  PDLCTLSI-------LINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGE 142

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           ++KA +   ++       +  +Y   I G C+  E      L   +  + ++P+ V +N 
Sbjct: 143 IKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNT 202

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++++LCK  LLGDA     E++       + DV+T T L+  +   G   +A +L N+M 
Sbjct: 203 IINSLCKNKLLGDACDVYSEMIVKG---ISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMK 259

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            KNI  ++  +N+LI+     G +  A      M+K    PDV TYN+L++      ++ 
Sbjct: 260 LKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVK 319

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            A + +  +++ GV PD   Y  +I GLC    + +A      M  K+++P+   +N +I
Sbjct: 320 HAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLI 379

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           DG  +   L  A ++   M   G+  +V+++  L+    + G + DA  + + +L  G  
Sbjct: 380 DGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYH 439

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
            +V  Y +LI   C  G    AL L  +M  +G  PD +T+  +I+    +    +AE++
Sbjct: 440 LNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKI 499

Query: 529 FAKIQTLGL 537
             ++   GL
Sbjct: 500 LREMIARGL 508



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 195/425 (45%), Gaps = 40/425 (9%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M  MRP P    +N  ++           + LF     NGI P+  T +IL++  C +  
Sbjct: 48  MLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAH 107

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           +  A      +L    G   + +  +T++    F+ G+  +AL   + +  +  Q D V+
Sbjct: 108 ITLAFSVFANIL--KRGFHPNAITLNTLIKGLCFR-GEIKKALYFHDQLVAQGFQLDQVS 164

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y  LING C  G+  +      ++      PDV+ YNT++N LCK   L +A   Y  + 
Sbjct: 165 YGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 224

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G++PD ++Y T+I G CI G + +A   L  M  K++ P    +N++ID   + G + 
Sbjct: 225 VKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMK 284

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALI------------------LAETRGGS--------- 451
            A  +  +M+   +  +VFT+N+LI                  +A+ RG +         
Sbjct: 285 EAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQ-RGVTPDVQCYTNM 343

Query: 452 ---------IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
                    + +A SL +EM    + PD+ TYN LI   C   H+  A+ L   M  +GI
Sbjct: 344 INGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGI 403

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            PD+ +YT L+ G C  G +++A+E+F ++   G  ++   + +L  R  +    D+A D
Sbjct: 404 QPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALD 463

Query: 563 IHQKW 567
           +  K 
Sbjct: 464 LKSKM 468



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 146/287 (50%), Gaps = 3/287 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   +  +I   C+ G +  A  L  +M  K   P+V T N L++ L K G +++A 
Sbjct: 228 ISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAK 287

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++  M +    P+  TYN+ I GY  V+E+  A ++F +MA  G+ P+   +  +++ L
Sbjct: 288 ILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGL 347

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK  ++ +A+    E+          D++T   L+D   KN    +A+AL   M ++ IQ
Sbjct: 348 CKTKMVDEAMSLFEEM---KHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQ 404

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+ +Y +L++G C +G +  A   F ++L +G+  +V  Y  L+N LCK G  DEA   
Sbjct: 405 PDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDL 464

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
              +   G  PD +++  II+ L    +  KA + L  M+ + ++ E
Sbjct: 465 KSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLLKE 511



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 128/282 (45%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A+A +N M           +N +++    N    +  + F Q    G  PD+ T + L+N
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           C C Q  +  A   +  + K G  P+ I+  T+I+GLC  G+I KA  F   ++ +    
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   +  +I+G  + G+      +   +    V  +V  +N +I +  +   + DA  + 
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            EM++ GI PDV TY  LI   C +GH+  A  L +EM  + I P++ T+  LI      
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKE 280

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
           G MKEA+ + A +    +  D   +  L   Y  + E   A+
Sbjct: 281 GKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAK 322


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 215/432 (49%), Gaps = 9/432 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++  L   G++  A+ +  +M++KG  P + T+  +++ L K G +E+A  +  +M 
Sbjct: 114 YTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDML 173

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG----IRPNRVTHNILVHALCKK 236
                P+   Y A I+G  ++ +LD+AL   + M  NG    + P+ V HN+++  LC  
Sbjct: 174 GNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCAS 233

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L DA+ +  E+  DD    T    T   L+ +  K     +A+A    M ++     +
Sbjct: 234 GNLEDALAYFDEL--DDSLDLTH--FTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTL 289

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y  L++GF   G +  A     + ++RGF+PD +TY ++++ LCK G+++E    +  
Sbjct: 290 FTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHE 349

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G  PD ++Y  +I G      I KA      ML+   V     +N+I+DG  + G 
Sbjct: 350 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 409

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           ++ A++    M   G  + V T++AL+      G++  A  L + ML  G  P++ +YN+
Sbjct: 410 VAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNI 469

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR-GNMKEAEEVFAKIQTL 535
           +I   C  G +  A   ++++L+R + PD+ T+   + G C R   + +  E+F  + + 
Sbjct: 470 IIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQ 529

Query: 536 GLAIDHIPFRIL 547
           G + +   + IL
Sbjct: 530 GTSPNLHSYSIL 541



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 207/418 (49%), Gaps = 9/418 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQ----KGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           + A+I  L   GK+  AL    +M++    +G  PDV+ HN ++ +LC  G+LE A    
Sbjct: 184 YTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYF 243

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            E+ +     +  T+N  +   C+    ++A+     M+     P   T+  LV    K 
Sbjct: 244 DELDDSLDLTH-FTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKL 302

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L +A+  L E +   +     D +T T ++D   K G   +    +++M  +  + D 
Sbjct: 303 GRLDEALLQLKEAV---ERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDA 359

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  LI+GF     I  A   + QML+ G +   +TYN +L+ LCK G++ EA   +  
Sbjct: 360 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 419

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + + G     ++Y  ++ G C  G++  A E    ML++   P    +N+II G  R G 
Sbjct: 420 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 479

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAE-TRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
           L+ A+   + +L   +  +V+TFN+ +     R  ++ D   L + M+  G  P++ +Y+
Sbjct: 480 LAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYS 539

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +L+   C  G + + L+++ EM+ RG+ PD++ +  LI+  C  G + EA EVF +++
Sbjct: 540 ILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELE 597



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 213/449 (47%), Gaps = 7/449 (1%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L E L  L  M + G  R  +E D   H  VIR LC  G +  AL    ++     +   
Sbjct: 197 LDEALVYLNQMVENGCAR-GVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTH- 254

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T N LV  LCK    E+A   +++MSE R  P   TY + + G+ ++  LD+AL     
Sbjct: 255 FTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKE 314

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
               G  P+ VT+  ++  LCK G + +  +   E+    +     D +T   L+D + K
Sbjct: 315 AVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM---RNRGYEPDAVTYAALIDGFMK 371

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                +A  ++  M Q       V YN++++G C  G ++ A+A F  M +RG +  V+T
Sbjct: 372 AKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVT 431

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y+ L++  C +G +  A   +  +   G  P+ +SY  II+GLC  G + KA  +   +L
Sbjct: 432 YSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLL 491

Query: 394 EKSVVPEPHIWNVIIDGY-GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           ++ + P+ + +N  + G   R   + +   + + M+S G S N+ +++ L+    R G +
Sbjct: 492 QRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGL 551

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
                +  EM+  G+ PDV  +N LI   C  G +  AL+++ E+ RR   PD  +Y  L
Sbjct: 552 EVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSL 610

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           +        M+EA  +   ++  G A  H
Sbjct: 611 LDALSRCERMEEARLLSFHMKLQGCAPRH 639



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 217/479 (45%), Gaps = 12/479 (2%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
            LDR   + D  P  C+   D      VI  LC   ++  A  +  + ++ G  PD +T+
Sbjct: 24  QLDRAMLLLDEMP--CS--PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTY 79

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N  ++ LCK   ++ A  ++++M E +  P   TY A + G  +   LD+A+ +   M  
Sbjct: 80  NVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVE 139

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G  P   T+ +++  L K G + +A +   ++L +       D    T L+    K G 
Sbjct: 140 KGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG---CRPDAFVYTALISGLAKIGK 196

Query: 277 KFQALALWNDMFQ----KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
             +AL   N M +    + ++ D+V +N++I   C +G++  A AYF ++     L    
Sbjct: 197 LDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTH-F 255

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           T+N L+  LCK  + +EA  F   +S+    P   +Y +++ G    G + +A   L   
Sbjct: 256 TFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEA 315

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +E+  +P+   +  IIDG  + G +         M + G   +  T+ ALI    +   I
Sbjct: 316 VERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMI 375

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             A  + ++ML  G      TYN+++   C  G +  A   +  M  RG    ++TY+ L
Sbjct: 376 PKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSAL 435

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           + G C+ GN+  A E+F ++   G   + + + I+ +   R  +  KA    +K L R 
Sbjct: 436 MDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 494



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 191/429 (44%), Gaps = 47/429 (10%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           MI +  V D      L+N LCK G L++A   +  + EM  SP+   +   I G CR   
Sbjct: 1   MIDRKLV-DTRVCTALLNGLCKTGQLDRA---MLLLDEMPCSPDMVAFTVVINGLCREKR 56

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           LD+A  +       G  P+ VT+N+ +  LCK   + DA + L ++   D+ K     +T
Sbjct: 57  LDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM---DEKKCLPTTVT 113

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            T L+D   K G   +A+A+   M +K     +  Y V+I+G    G +  A   F  ML
Sbjct: 114 YTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDML 173

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA----PDQISYKTIIQGLCIH 379
             G  PD   Y  L++ L K GKLDEA  +   + + G A    PD + +  +I+ LC  
Sbjct: 174 GNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCAS 233

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G++  A  +    L+ S+                  DL++                 FTF
Sbjct: 234 GNLEDALAY-FDELDDSL------------------DLTH-----------------FTF 257

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N L+ A  +     +A +  K+M     FP +FTY  L+     LG +  AL    E + 
Sbjct: 258 NPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVE 317

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
           RG  PD +TYT +I G C  G ++E  E F +++  G   D + +  L   + + K   K
Sbjct: 318 RGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPK 377

Query: 560 ARDIHQKWL 568
           A  ++++ L
Sbjct: 378 AHRVYRQML 386


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 232/482 (48%), Gaps = 47/482 (9%)

Query: 129 CLGGK--IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           CLG K  +  AL L   M +K   P++ T+N +++ LC  G + +A  +  EM      P
Sbjct: 360 CLGKKRKVDEALTLFDVM-KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFP 418

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N  + N  +   C+ N+L++A  +F + +  G  PN VT+  L+  L KKG + DA +  
Sbjct: 419 NLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLF 478

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            ++L   D    ++ I  T L+ ++F +G K     ++ +M ++  + D+   N  ++  
Sbjct: 479 EKML---DAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCV 535

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
              G++    A F  M   GFLPDV +Y+ L++ L K G+  E S+ +  +S+ G A D 
Sbjct: 536 FKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDA 595

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP-------------------EPH----- 402
            +Y  ++ GLC  G + KA E L  M  K V P                   E +     
Sbjct: 596 RAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEE 655

Query: 403 -----------IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
                      +++ +IDG+G+ G +  A+ I + M+  G++ NV+T+N+L+ A  +   
Sbjct: 656 AKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEE 715

Query: 452 IFDA---FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
           I +A   F   KEM      P+ +TY++LI   C +   + A   + EM ++G+ P+++T
Sbjct: 716 IDEALICFQSMKEMKCS---PNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVT 772

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           YT +I G    GN+ +A  +F + +T G   D   F  L +         +A  + ++  
Sbjct: 773 YTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETR 832

Query: 569 LR 570
           LR
Sbjct: 833 LR 834



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 193/445 (43%), Gaps = 32/445 (7%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC+ G++  A  +R +M   G  P++L+ N +V+ LCK   LE+A  +    SE  
Sbjct: 391 IIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERG 450

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN  TY + I G  +  ++D A  LF  M + G   N + +  L+      G   D  
Sbjct: 451 CNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGH 510

Query: 244 KFLGEVLAD----------------------DDGKAT----------SDVITSTILMDSY 271
           K   E++                        + G+A            DV + +IL+   
Sbjct: 511 KIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGL 570

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K G   +   ++  M Q+    D  AYN +++G C +G +  A+    +M  +   P V
Sbjct: 571 TKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTV 630

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            TY ++++ L K  +LDEA   +      G+  + I Y ++I G    G I +A   L  
Sbjct: 631 ATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEE 690

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M++K + P  + WN ++D   +  ++  A      M     S N +T++ LI    R   
Sbjct: 691 MMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 750

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
              AF   +EM   G+ P+V TY  +I     +G+I  A  L++     G  PD  ++  
Sbjct: 751 YNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNA 810

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLG 536
           LI+G        EA +VF + +  G
Sbjct: 811 LIEGMSNANRPMEAYQVFEETRLRG 835



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 199/436 (45%), Gaps = 6/436 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL L R+M   G    V     LV  L + G +E A  ++ E+      P+   YN  I 
Sbjct: 195 ALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCID 254

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            + +   +D A   F  +  +G+RP+ V++  +V  LCK G LG+A +  G++ A+ D  
Sbjct: 255 CFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERD-- 312

Query: 257 ATSDVITSTILMDSYFKNGDKFQ-ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
                  +T++M   + + ++F  A  L   + ++     +V++N ++        +  A
Sbjct: 313 VPCAYAYNTMIMG--YGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEA 370

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F  ++K+   P++ TYN +++ LC  G+++EA      +   G+ P+ +S   ++  
Sbjct: 371 LTLF-DVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDR 429

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           LC    + +A     S  E+   P    +  +IDG G+ G + +A+ + + ML  G  +N
Sbjct: 430 LCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDAN 489

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
              + +LI      G   D   + KEM+  G  PD+   N  +      G +     +++
Sbjct: 490 PIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFE 549

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
           +M   G  PD+ +Y+ LI G    G  +E   +F  +   G A+D   +  +     +  
Sbjct: 550 DMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSG 609

Query: 556 ESDKARDIHQKWLLRN 571
           + DKA ++ ++  +++
Sbjct: 610 KVDKAYEVLEEMKVKH 625



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/442 (23%), Positives = 204/442 (46%), Gaps = 6/442 (1%)

Query: 129 CLG--GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           C G  G +  A     ++   G  PD +++  +V  LCK G L +A+ +  +M   R  P
Sbjct: 255 CFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVP 314

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
               YN  I GY      D A  L   +   G  P+ V+ N ++  L KK  + +A+   
Sbjct: 315 CAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLF 374

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            +V+  D   A  ++ T  I++D     G   +A  + ++M    +  ++++ N++++  
Sbjct: 375 -DVMKKD---AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRL 430

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C    +  A   F    +RG  P+ +TY +L++ L K+GK+D+A   +  +   G   + 
Sbjct: 431 CKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANP 490

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           I Y ++I+   +HG      +    M+ +   P+  + N  +D   + G++    +I + 
Sbjct: 491 IIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFED 550

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M SFG   +V +++ LI   T+ G   +  ++ + M   G   D   YN ++   C  G 
Sbjct: 551 MKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGK 610

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A ++ +EM  + + P + TY  ++ G      + EA  +F + ++ G+ ++ I +  
Sbjct: 611 VDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSS 670

Query: 547 LKKRYRRMKESDKARDIHQKWL 568
           L   + ++   D+A  I ++ +
Sbjct: 671 LIDGFGKVGRIDEAYLILEEMM 692



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 170/346 (49%), Gaps = 3/346 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++IR+  + G+      + ++MI++G  PD+   N  ++ + K G++EK   +  +M 
Sbjct: 493 YTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMK 552

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  +Y+  I G  +  +  +  ++F  M+  G   +   +N +V  LCK G + 
Sbjct: 553 SFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVD 612

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A + L E+           V T   ++D   K     +A  L+ +   K I+ +++ Y+
Sbjct: 613 KAYEVLEEMKVK---HVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYS 669

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+GF   G I  A+    +M+K+G  P+V T+N+L++ L K  ++DEA   +  + + 
Sbjct: 670 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEM 729

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
             +P+  +Y  +I GLC      KA  F   M ++ ++P    +  +I G  + G++++A
Sbjct: 730 KCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDA 789

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +S+ +   + G   +  +FNALI   +      +A+ + +E  L G
Sbjct: 790 YSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRG 835



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 3/260 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D R +  +I  L   G+      + + M Q+G   D   +N +V+ LCK G ++KA  V+
Sbjct: 559 DVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVL 618

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P  ATY + + G  +++ LD+A  LF    + GI  N + ++ L+    K 
Sbjct: 619 EEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKV 678

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A   L E++       T +V T   LMD+  K  +  +AL  +  M +     + 
Sbjct: 679 GRIDEAYLILEEMMKKG---LTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNT 735

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y++LING C     + AF ++ +M K+G +P+V+TY T+++ L K G + +A   +  
Sbjct: 736 YTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFER 795

Query: 357 LSKTGVAPDQISYKTIIQGL 376
               G  PD  S+  +I+G+
Sbjct: 796 FKTNGGIPDSASFNALIEGM 815



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/440 (22%), Positives = 183/440 (41%), Gaps = 78/440 (17%)

Query: 168 DLEKADHVIREMSEMR---PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           DL   + V+ EMS +    P+P CA   A +    R   L+ A  +   M +   RP   
Sbjct: 121 DLAALEKVLEEMSHLGYGLPNPACA---ALVATLVRSRRLEDAFRVIGAMRHLKFRPPFS 177

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
            + +L+ AL +      A++ L ++   D G   S V   T L+ +  + G    ALAL 
Sbjct: 178 AYTVLIGALAEARQPERALELLRQM--QDVGYEVS-VPLFTTLVRALAREGQMEPALALV 234

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           ++                + G CL                    PD++ YN  ++C  K 
Sbjct: 235 DE----------------VKGSCLE-------------------PDIVLYNVCIDCFGKA 259

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
           G +D A  F+  L   G+ PD +SY +++  LC  G + +A E    M  +  VP  + +
Sbjct: 260 GSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAY 319

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--LAETR-------------- 448
           N +I GYG      +A+ + + +   G   +V +FN+++  L + R              
Sbjct: 320 NTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK 379

Query: 449 ------------------GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
                              G + +A+ ++ EM L G+FP++ + N+++   C    +  A
Sbjct: 380 DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEA 439

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
            ++++    RG  P+ +TY  LI G   +G + +A  +F K+   G   + I +  L + 
Sbjct: 440 HRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRN 499

Query: 551 YRRMKESDKARDIHQKWLLR 570
           +      +    I+++ + R
Sbjct: 500 FFMHGRKEDGHKIYKEMIRR 519



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   K   A    ++M ++G +P+V+T+  +++ L K+G++  A  +        
Sbjct: 741 LINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNG 800

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+ A++NA I G    N   +A  +F      G R N  T   L+ AL K   L  A 
Sbjct: 801 GIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAA 860

Query: 244 KFLGEVLAD 252
             +G VL++
Sbjct: 861 -IVGAVLSE 868


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 188/395 (47%), Gaps = 6/395 (1%)

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
           G    + R     G  PDV     L+  LC+ G    A  V+R         +   YN  
Sbjct: 58  GAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTL 117

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           + GYCR   LD A  L  +M    + P+  T+  L+  LC +G + DA+  L ++L    
Sbjct: 118 VAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRG- 173

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
                +V+T T+L+++  +N    QA+A+ ++M  K    +IV YNV+ING C  G +  
Sbjct: 174 --CQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 231

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A     ++   GF PD ++Y TLL  LC   + D+    +  + +    P+++++  +I+
Sbjct: 232 ARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIR 291

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
             C  G + +A + L  M E        + N++I+   + G + +AF + + M S+G + 
Sbjct: 292 FFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNP 351

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +  ++  ++    R     DA  L  EM+ +   P+  T+N  I   C  G I  A+ L 
Sbjct: 352 DTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLI 411

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           ++M   G T  ++TY  L+ G C +G++  A E+F
Sbjct: 412 EQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELF 446



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 235/506 (46%), Gaps = 19/506 (3%)

Query: 75  KDSDNEGNPQAVFNALDLILK----ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCL 130
           + ++  G+P  VF    L+       +LD  + +  + PV      D   +  +IR LC 
Sbjct: 100 RAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPV----APDAYTYTPLIRVLCD 155

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G++  AL L   M+++G  P+V+T+  L+  +C+    E+A  V+ EM     +PN  T
Sbjct: 156 RGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVT 215

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I G CR   +D A  L + + + G +P+ V++  L+  LC      D  +   E++
Sbjct: 216 YNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMM 275

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
              +     + +T  +L+  + + G   +A+ +   M +    T+    N++IN  C  G
Sbjct: 276 ---EKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQG 332

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  AF     M   G  PD I+Y T+L  LC+  + D+A      + +    P+++++ 
Sbjct: 333 RVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFN 392

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T I  LC  G I +A   +  M E         +N +++G+   G + +A    +L  S 
Sbjct: 393 TFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSAL---ELFRSM 449

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
               N  T+  L+        +  A  L  EML     P+V T+N+L+   C  G +  A
Sbjct: 450 PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEA 509

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR----I 546
           ++L ++M+  G TP++ITY  L+ G     + ++A E+   + + G++ D I F     I
Sbjct: 510 IELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGI 569

Query: 547 LKKRYRRMKESDKARDIHQKWLLRNK 572
           L K   R++E+ +   + Q   +R K
Sbjct: 570 LSKE-DRIEEAVQLFHVVQDIGMRPK 594



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 197/424 (46%), Gaps = 6/424 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  +C  G++  A  L  ++   G  PD +++  L+  LC     +  + +  EM E  
Sbjct: 219 IINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKN 278

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T++  I  +CR   +++A+ +   M  +G   N    NI+++++CK+G + DA 
Sbjct: 279 CMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAF 338

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L ++          D I+ T ++    +      A  L N+M + N   + V +N  I
Sbjct: 339 KLLNDM---GSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFI 395

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
              C  G I  A     QM + G    V+TYN L+N  C QG +D A   +  +      
Sbjct: 396 CILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CK 452

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ I+Y T++ GLC    +  A E +  ML     P    +NV++  + + G L  A  +
Sbjct: 453 PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIEL 512

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M+  G + N+ T+N L+   T+  S  DA  L   ++  G+ PDV T++ +IG    
Sbjct: 513 VEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSK 572

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              I  A+QL+  +   G+ P  + Y +++ G C R  +  A + FA + + G   +   
Sbjct: 573 EDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNEST 632

Query: 544 FRIL 547
           + IL
Sbjct: 633 YIIL 636



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 198/459 (43%), Gaps = 44/459 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR+LC  G+   A  + R     G+  DV  +N LV   C+ G L+ A  +I     M 
Sbjct: 82  LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLI---GSMP 138

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  TY   I   C    +  AL L   M   G +PN VT+ +L+ A+C+      A+
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAM 198

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E+ A      T +++T  ++++   + G    A  L N +     Q D V+Y  L+
Sbjct: 199 AVLDEMRAKG---CTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLL 255

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITY----------------------------- 334
            G C +         F +M+++  +P+ +T+                             
Sbjct: 256 KGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCA 315

Query: 335 ------NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
                 N ++N +CKQG++D+A      +   G  PD ISY T+++GLC       A+E 
Sbjct: 316 TNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKEL 375

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  M+  +  P    +N  I    + G +  A  + + M   G +  V T+NAL+     
Sbjct: 376 LNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCV 435

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G I  A  L + M      P+  TY  L+   CN   +  A +L  EMLR    P+++T
Sbjct: 436 QGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVT 492

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +  L+   C +G ++EA E+  ++   G   + I +  L
Sbjct: 493 FNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTL 531



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 201/424 (47%), Gaps = 6/424 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            + D   +  +++ LC   +      L  +M++K  +P+ +T + L+   C+ G +E+A 
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 303

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V+ +M+E   + N    N  I   C+   +D A  L + M + G  P+ +++  ++  L
Sbjct: 304 QVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGL 363

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C+     DA + L E++ ++      + +T    +    + G   QA+ L   M +    
Sbjct: 364 CRAERWDDAKELLNEMVRNN---CPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCT 420

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             +V YN L+NGFC+ G I SA   F  M  +   P+ ITY TLL  LC   +LD A+  
Sbjct: 421 VGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAEL 477

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + +    P+ +++  ++   C  G + +A E +  M+E    P    +N ++DG  +
Sbjct: 478 VAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITK 537

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
                +A  +   ++S GVS +V TF+++I   ++   I +A  L   +   G+ P    
Sbjct: 538 DCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVV 597

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN ++   C    I  A+  +  M+  G  P+  TY  LI+G    G +KEA+++ + + 
Sbjct: 598 YNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLC 657

Query: 534 TLGL 537
           + G+
Sbjct: 658 SRGV 661



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 161/334 (48%), Gaps = 8/334 (2%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D  K + D G   C    D   +  V++ LC   +   A  L  +M++    P+ +T N 
Sbjct: 336 DAFKLLNDMGSYGCN--PDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNT 393

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
            +  LC+ G +E+A  +I +MSE   +    TYNA + G+C    +D AL LF +M    
Sbjct: 394 FICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP--- 450

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
            +PN +T+  L+  LC    L  A + + E+L    G    +V+T  +L+  + + G   
Sbjct: 451 CKPNTITYTTLLTGLCNAERLDGAAELVAEMLR---GDCPPNVVTFNVLVSFFCQKGFLE 507

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A+ L   M +     +++ YN L++G   +     A      ++ +G  PDVIT+++++
Sbjct: 508 EAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSII 567

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             L K+ +++EA   + V+   G+ P  + Y  I+ GLC   +I  A +F   M+    +
Sbjct: 568 GILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCM 627

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           P    + ++I+G    G L  A  +  ++ S GV
Sbjct: 628 PNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 145/333 (43%), Gaps = 5/333 (1%)

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L  AV+ + E     DG+A  DV   T L+ +  + G    A  +           D+ A
Sbjct: 56  LAGAVRLV-ERSGSCDGEA-PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFA 113

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           YN L+ G+C  G + +A      M      PD  TY  L+  LC +G++ +A      + 
Sbjct: 114 YNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDML 170

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           + G  P+ ++Y  +++ +C +    +A   L  M  K   P    +NVII+G  R G + 
Sbjct: 171 RRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 230

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           +A  + + + S+G   +  ++  L+          D   L  EM+     P+  T+++LI
Sbjct: 231 DARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 290

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G +  A+Q+ ++M   G   +      +I   C +G + +A ++   + + G  
Sbjct: 291 RFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCN 350

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            D I +  + K   R +  D A+++  + +  N
Sbjct: 351 PDTISYTTVLKGLCRAERWDDAKELLNEMVRNN 383


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 196/404 (48%), Gaps = 45/404 (11%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A  L  KM++ G  P + T N L++ LCK G L++ + ++ ++ +    PN  T+N FI 
Sbjct: 200 AYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQ 259

Query: 197 GYCRVNELD-------KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           G CR   L+       +A +    M N G+ P+  T+N +++   K G + DA       
Sbjct: 260 GLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDA------- 312

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
                         S IL D+ FK                     D   Y  LI G C +
Sbjct: 313 --------------SRILKDAKFKG-----------------FVPDEFTYCSLIIGVCQD 341

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           GDI  A A F + L +G  P ++ YNTL+  L +QG + +A      +SK G++PD  +Y
Sbjct: 342 GDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTY 401

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             +I GLC  G +  A   L + + K  +P+   +N +IDGY +   + NA  I D M S
Sbjct: 402 NLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWS 461

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            GV+ +V T+N+++    +     D     K ++  G  P++ TYN+LI + C    +  
Sbjct: 462 HGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTE 521

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           AL L +E+  RG+ PD +++  +I G C  G++ EA ++F +++
Sbjct: 522 ALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRME 565



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 199/409 (48%), Gaps = 11/409 (2%)

Query: 125 IRDLCLGG-------KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR 177
           I+ LC  G       K+  A     KM+ KG  PD  T+N ++    K+G ++ A  +++
Sbjct: 258 IQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILK 317

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           +       P+  TY + I G C+  ++D AL LF      G++P+ V +N L+  L ++G
Sbjct: 318 DAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQG 377

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
           L+  A++ + ++  +     + D+ T  ++++   K G    A  L N    K    DI 
Sbjct: 378 LVLKALQLMNDMSKEG---MSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIF 434

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            +N LI+G+C    + +A      M   G  PDVITYN++LN LCK  K ++    + ++
Sbjct: 435 TFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMI 494

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
            + G  P+ I+Y  +I+ LC    + +A + L  +  + ++P+P  +  +I G+   GDL
Sbjct: 495 MEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDL 554

Query: 418 SNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
             A+ + R +   + +   V T+N +I A +    +  A  L  EM   G  PD +TY +
Sbjct: 555 DEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRV 614

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           +I   C +G+++       + +  G  P + T+  +I   C +  + EA
Sbjct: 615 MIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEA 663



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 199/419 (47%), Gaps = 11/419 (2%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE-------KADHVIREMS 180
           LC  G +     L  K+++ G  P++ T N  +  LC+ G LE       +A++ + +M 
Sbjct: 226 LCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMV 285

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  TYN  I GY +V ++  A  +       G  P+  T+  L+  +C+ G + 
Sbjct: 286 NKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDID 345

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A+    E L    G   S V+ +T L+    + G   +AL L NDM ++ +  DI  YN
Sbjct: 346 HALALFEEALGK--GLKPSIVLYNT-LIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYN 402

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           ++ING C  G +S A       + +G+LPD+ T+NTL++  CK+ K+D A      +   
Sbjct: 403 LVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSH 462

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GV PD I+Y +I+ GLC         E    ++EK  +P    +N++I+   +   ++ A
Sbjct: 463 GVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEA 522

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIG 479
             + + + + G+  +  +F  +I      G + +A+ L + M     I   V TYN++I 
Sbjct: 523 LDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMIN 582

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
           A      + +A +L+ EM  +G  PD  TY  +I G C  GN+    +   K   +G  
Sbjct: 583 AFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFV 641



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 209/459 (45%), Gaps = 12/459 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +V+ +R+    GK+  A+ +  +M      P + ++N ++N L + G   +A  V   M 
Sbjct: 79  YVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMK 138

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               +P+  T+   I  +CR      AL L + M + G   N V +  ++    ++    
Sbjct: 139 HEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQV 198

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A +   ++L          + T   LM    K G   +   L N + +  +  ++  +N
Sbjct: 199 EAYELFNKMLRLG---IFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFN 255

Query: 301 VLINGFC-------LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
           + I G C        N  +  A  Y  +M+ +G  PD  TYNT++    K GK+ +AS  
Sbjct: 256 IFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRI 315

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
                  G  PD+ +Y ++I G+C  GDI  A       L K + P   ++N +I G  +
Sbjct: 316 LKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQ 375

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G +  A  + + M   G+S +++T+N +I    + G + DA +L    +  G  PD+FT
Sbjct: 376 QGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFT 435

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +N LI   C    +  A+ + D M   G+TPD+ITY  ++ G C     ++  E F  I 
Sbjct: 436 FNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIM 495

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
             G   + I + IL +   + ++  +A D+ ++  +RN+
Sbjct: 496 EKGCLPNIITYNILIESLCKARKVTEALDLLEE--IRNR 532



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 198/429 (46%), Gaps = 10/429 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  L   G    A  +  +M  +G  PDV T    +   C+      A  ++  M   
Sbjct: 116 AIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQ 175

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N   Y   I+G+   N   +A  LF+ M   GI P+  T N L+H LCKKG L + 
Sbjct: 176 GCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEG 235

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNG-------DKFQALALWNDMFQKNIQTD 295
            K L +VL +       ++ T  I +    + G          +A    + M  K ++ D
Sbjct: 236 EKLLNKVLKNG---VCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPD 292

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
              YN +I G+   G I  A         +GF+PD  TY +L+  +C+ G +D A   + 
Sbjct: 293 DFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFE 352

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
                G+ P  + Y T+I+GL   G ++KA + +  M ++ + P+   +N++I+G  + G
Sbjct: 353 EALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMG 412

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            +S+A ++ +  ++ G   ++FTFN LI    +   + +A  +   M   G+ PDV TYN
Sbjct: 413 CVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYN 472

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            ++   C        ++ +  ++ +G  P+IITY  LI+  C    + EA ++  +I+  
Sbjct: 473 SILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNR 532

Query: 536 GLAIDHIPF 544
           GL  D + F
Sbjct: 533 GLIPDPVSF 541



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 186/396 (46%), Gaps = 4/396 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE D   +  +I      GKI  A  + +    KG VPD  T+  L+  +C+ GD++ A 
Sbjct: 289 LEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHAL 348

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  E       P+   YN  I G  +   + KAL L + M+  G+ P+  T+N++++ L
Sbjct: 349 ALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGL 408

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G + DA   L   +A        D+ T   L+D Y K      A+ + + M+   + 
Sbjct: 409 CKMGCVSDANNLLNAAIAKG---YLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVT 465

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D++ YN ++NG C           F  ++++G LP++ITYN L+  LCK  K+ EA   
Sbjct: 466 PDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDL 525

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYG 412
              +   G+ PD +S+ T+I G C +GD+ +A +    M ++  +      +N++I+ + 
Sbjct: 526 LEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFS 585

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
              D+  A  +   M   G   + +T+  +I    + G++   +    + +  G  P + 
Sbjct: 586 EKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLT 645

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
           T+  +I   C    +H A+ +   M+R G+ P+ + 
Sbjct: 646 TFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 5/198 (2%)

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM---LEKSVVP 399
           ++  L   S F  V  + G     ++YK +I+ L  HG+       L+ M   ++ S++ 
Sbjct: 17  QKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLL- 75

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
              ++   +  YGR G +  A  + + M  +    ++F++NA++      G    A  + 
Sbjct: 76  -EGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVY 134

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
             M  +GI PDV T+ + I + C       AL+L + M  +G   + + Y  +I G    
Sbjct: 135 LRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEE 194

Query: 520 GNMKEAEEVFAKIQTLGL 537
               EA E+F K+  LG+
Sbjct: 195 NYQVEAYELFNKMLRLGI 212


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 189/400 (47%), Gaps = 44/400 (11%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDLEKADHV 175
           D   +  ++R  CL G++  A+ L R+M Q+ G  P    +N+ V+ LCK G + +A  V
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           ++ M +    P+  T+N  I G C+   LD+A  +   M  +G   N VT+N L++ L  
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G  G+AV  +        G  T+                                   D
Sbjct: 137 AGRSGEAVLVM-------QGMTTT----------------------------------PD 155

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLDEASHFY 354
              YN +I+GFC +G+I  A+ +  +M +R G  PD  TY+ L+N LCK   L +A    
Sbjct: 156 TQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELL 215

Query: 355 G-VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             ++ +       +++ T++ G C   D+ +ARE L SMLE    P+   ++ IIDG  R
Sbjct: 216 QEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCR 275

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
           CGD+   F++ + M+S G   +V T+  L+    + G + +A  L K ML DG  P+  T
Sbjct: 276 CGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVT 335

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           Y+L+    C +  + +A  L   +  +G   D++ +  L+
Sbjct: 336 YSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 177/385 (45%), Gaps = 12/385 (3%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
           TY   +  +C   EL  A+ L   M    G+ P    +N  VHALCK G + +A++ +  
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +    DG    DV+T   L+    K G   +A  + ++M +     ++V YN LING   
Sbjct: 80  M---KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL-SKTGVAPDQI 367
            G    A      M      PD  TYN +++  CK G++D A  F   +  + G +PD  
Sbjct: 137 AGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSML-EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           +Y  +I GLC   ++ KA E L  M+  K        +N ++DGY +  DL  A  +   
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           ML  G + +V T++ +I    R G +   F+L ++M+  G  PDV TY +L+   C  G 
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A +L   ML  G TP+ +TY+ +  G C    +  A ++   I+  G   D + F  
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFET 373

Query: 547 LKKRYRRMKESDKARDIHQKWLLRN 571
           L      +K+    R   QKW L  
Sbjct: 374 L---LLSVKKRLLDRAAFQKWKLET 395



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 122/265 (46%), Gaps = 44/265 (16%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDLEK 171
           T   D + + A+I   C  G+I  A     +M Q+ G  PD  T++ L+N LCK  +L K
Sbjct: 151 TTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRK 210

Query: 172 ADHVIREMSEMRPSPNCAT---YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           AD +++EM   +    CA+   +N  + GYC+  +LD+A  L S+M  +G  P+ VT++ 
Sbjct: 211 ADELLQEMIGRKDC--CASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYST 268

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++  LC                                      + GD  +  AL   M 
Sbjct: 269 IIDGLC--------------------------------------RCGDVDKGFALLEKMV 290

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            +  + D+V Y VL+ G C  G +  A     +ML+ G  P+ +TY+ + + LCK  KLD
Sbjct: 291 SRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLD 350

Query: 349 EASHFYGVLSKTGVAPDQISYKTII 373
            A+     +   G   D ++++T++
Sbjct: 351 MANDLLTSIRDKGRVTDVVAFETLL 375



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  LC  G +     L  KM+ +G  PDV+T+  LV  LCK G + +A  ++
Sbjct: 262 DVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLV 321

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           + M E   +PN  TY+    G C++++LD A  L +++ + G   + V    L+ ++ KK
Sbjct: 322 KRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSV-KK 380

Query: 237 GLLGDA 242
            LL  A
Sbjct: 381 RLLDRA 386


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 214/456 (46%), Gaps = 38/456 (8%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D       I+  CL G+I  AL    K+I  G   D +++  L+N LCK+G+ + A  
Sbjct: 260 EPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALE 319

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++R        P+   YN  I G C+   ++ A  L+S   +  I P+  T+N L+   C
Sbjct: 320 LLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFC 379

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G L DA+                                       L+N M  KNI  
Sbjct: 380 IVGKLKDAID--------------------------------------LFNKMTSKNIIP 401

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D+  +++L++GFC +G+I  A      M+K+   PDV+TY++L++  C   ++++A   +
Sbjct: 402 DVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIF 461

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +S  GV  +  SY  +I G C    + +A +    M  K + P+   ++ +IDG  + 
Sbjct: 462 NTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKS 521

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G +S A  + D M   G   ++ T+N+++ A  +   +  A +L  ++   GI PD+ TY
Sbjct: 522 GRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTY 581

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
            +L+   C  G +  A ++++++L +G   D+  YT +I+G C +G   EA  + +K++ 
Sbjct: 582 TILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEE 641

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            G   D   + I+        E+D A  + ++ ++R
Sbjct: 642 NGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMR 677



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 192/411 (46%), Gaps = 36/411 (8%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P+P    +   +    +       L L   M   GI+ N +  NIL+++ C+ GL+  A 
Sbjct: 106 PTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILINSFCQLGLIPFAF 165

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSY-FKNGDKFQ-----ALALWN-------DMFQK 290
             L           T  V    IL D +  KN + F+      L LW+       D  Q 
Sbjct: 166 SVL-----------TRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFLQS 214

Query: 291 NIQTDIVAYNVLINGF-------CLNGDISSAFAYF-CQMLKRGFLPDVITYNTLLNCLC 342
            +   + ++ +LI          CL      +  Y   ++LK G+ PD IT  T +   C
Sbjct: 215 RLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFC 274

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
            +G++ +A HF+  +   G   DQ+SY T+I GLC  G+   A E L     K V P+  
Sbjct: 275 LKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVV 334

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
           ++N IIDG  +   +++AF +    +S  +  +VFT+NALI      G + DA  L  +M
Sbjct: 335 MYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKM 394

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
               I PDV+T+++L+   C  G+I  A  +   M+++ I PD++TY+ L+ G+C    +
Sbjct: 395 TSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEV 454

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLL 569
            +AE +F  +   G+  +   + I+   + ++K  D+A    +++H K + 
Sbjct: 455 NKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIF 505



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 173/355 (48%), Gaps = 3/355 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I  +C    +  A  L  + + K   PDV T+N L++  C +G L+ A 
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  +M+     P+  T++  + G+C+   + +A ++ + M    I+P+ VT++ L+   
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGY 448

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C    +  A      +        T++V +  I+++ + K     +A+ L+ +M  K I 
Sbjct: 449 CLVNEVNKAESIFNTM---SHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIF 505

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D++ Y+ LI+G C +G IS A     +M  RG  PD+ITYN++L+ LCK+  +D+A   
Sbjct: 506 PDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITL 565

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              L   G+ PD  +Y  +++GLC  G +  AR+    +L K    + + + V+I G+  
Sbjct: 566 LTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCD 625

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
            G    A ++   M   G   +  T+  +IL+         A  L +EM++ G+ 
Sbjct: 626 KGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 130/272 (47%), Gaps = 19/272 (6%)

Query: 80  EGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALW 139
           +GN +   N L +++K+                +++ D   + +++   CL  ++  A  
Sbjct: 416 DGNIKEAKNVLAMMMKQ----------------SIKPDVVTYSSLMDGYCLVNEVNKAES 459

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           +   M  +G   +V ++N ++N  CKI  +++A  + +EM   +  P+  TY++ I G C
Sbjct: 460 IFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLC 519

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +   +  AL L   M   G +P+ +T+N ++ ALCKK  +  A+  L ++          
Sbjct: 520 KSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQG---IRP 576

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           D+ T TIL+    ++G    A  ++ D+  K    D+ AY V+I GFC  G    A A  
Sbjct: 577 DMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALL 636

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
            +M + G +PD  TY  ++  L ++ + D A 
Sbjct: 637 SKMEENGCIPDAKTYEIIILSLFEKDENDMAE 668



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 75/154 (48%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   + +++  LC    +  A+ L  K+  +G  PD+ T+  LV  LC+ G LE A  
Sbjct: 540 QPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARK 599

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V  ++     + +   Y   I G+C     D+AL L S M  NG  P+  T+ I++ +L 
Sbjct: 600 VFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLF 659

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           +K     A K L E++      A +D + ++IL+
Sbjct: 660 EKDENDMAEKLLREMIMRGLLVALTDDLVASILV 693


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 218/463 (47%), Gaps = 18/463 (3%)

Query: 90  LDLILKENL-----DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKM 144
           LD +L+EN+          MR  G     ++ +   +  +IR LC   ++  A  +  +M
Sbjct: 76  LDALLRENMVGAVVPVYDNMRKAG-----VDPNVYTYNLLIRALCQNDRVDAARKMLDEM 130

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
            +KG  PD ++H  +V+ +CK+G +E+A   + E       P  A+YNA +   C    +
Sbjct: 131 SRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAE-----TVPVQASYNAVVHALCGEFRM 185

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
            +   + + M   G++PN VT+  +V A CK   L  A   L  +++      T +V+T 
Sbjct: 186 WEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMG---CTPNVLTF 242

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T L+  +F++G    AL++W+ M  +      ++YNVLI G C  GD+  A  +F  M +
Sbjct: 243 TALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKR 302

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
              LP+  TY+TL++     G LD A   +  +  +G  P+ + Y  +I  LC      +
Sbjct: 303 NALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQ 362

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A   +  ML  +  P    +N +I     CG +  A ++   M   G   N  T+N L+ 
Sbjct: 363 AESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLH 422

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              R G+  DAF++  EML +G    + TYN +I   C +     A+ L   M+ +GI P
Sbjct: 423 GLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQP 482

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           D  T+  +I  +C  G +  A  +  ++  +    + + + IL
Sbjct: 483 DAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTIL 525



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 193/394 (48%), Gaps = 8/394 (2%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P V  +N+L++ L +   +     V   M +    PN  TYN  I   C+ + +D A  +
Sbjct: 67  PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M+  G  P+ V+H  +V  +CK G + +A  FL E +     +A+ + +   +  + 
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPV---QASYNAVVHALCGE- 182

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
            F+  + F  +   N+M Q+ +Q ++V Y  +++ FC   ++  A A   +M+  G  P+
Sbjct: 183 -FRMWEVFSVV---NEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPN 238

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+T+  L+    + GK+ +A   +  +   G AP  ISY  +I+GLC  GD+  A +F  
Sbjct: 239 VLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFN 298

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
           SM   +++P    ++ ++DG+   GDL  A  I + M S G   NV  +  +I    +  
Sbjct: 299 SMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM 358

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
               A SL  +ML+D   P+  T+N LIG  C+ G +  AL ++  M R G  P+  TY 
Sbjct: 359 MFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYN 418

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           EL+ G    GN K+A  +  ++   G  +  + +
Sbjct: 419 ELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTY 452



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 191/414 (46%), Gaps = 15/414 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AV+  LC   ++     +  +M+Q+G  P+V+T+  +V+  CK  +L  A  ++  M  M
Sbjct: 174 AVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSM 233

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +PN  T+ A + G+    ++  AL ++  M + G  P+ +++N+L+  LC  G L  A
Sbjct: 234 GCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGA 293

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           + F   +          +  T + L+D +   GD   A+ +WN+M     + ++V Y  +
Sbjct: 294 LDFFNSM---KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNM 350

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+  C       A +   +ML     P+ +T+NTL+  LC  G++  A + +  + + G 
Sbjct: 351 IDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGC 410

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+  +Y  ++ GL   G+   A   ++ ML          +N +I+   +     +A  
Sbjct: 411 HPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAML 470

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M+  G+  + FTFNA+I A  + G +  A  L  +M       +V  Y +LI   C
Sbjct: 471 LLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELC 530

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           N G +  A+    +ML  GI P+  T+  L++             +F  I T+G
Sbjct: 531 NQGKLSNAMVYLLKMLYEGICPNEATWNVLVRA------------IFTNIGTIG 572



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 183/406 (45%), Gaps = 44/406 (10%)

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR-PNRVT 225
           GD++   + ++EM     +       A I  + R    D+AL  F   ++ G R P    
Sbjct: 12  GDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRV 71

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
           +N L+ AL ++ ++G  V                                       +++
Sbjct: 72  YNHLLDALLRENMVGAVVP--------------------------------------VYD 93

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
           +M +  +  ++  YN+LI   C N  + +A     +M ++G  PD +++ T+++ +CK G
Sbjct: 94  NMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLG 153

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           +++EA  F   L++T   P Q SY  ++  LC    + +    +  M+++ + P    + 
Sbjct: 154 RVEEARGF---LAET--VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYT 208

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            I+D + +  +L  A +I   M+S G + NV TF AL+      G + DA S+   M+ +
Sbjct: 209 TIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDE 268

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G  P   +YN+LI   C +G +  AL  ++ M R  + P+  TY+ L+ G    G++  A
Sbjct: 269 GWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGA 328

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             ++ ++++ G   + + +  +     +    D+A  +  K L+ N
Sbjct: 329 MLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 374



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 1/158 (0%)

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV-S 433
           GL   GD+   +  L  M  + V          I  + R G    A          G   
Sbjct: 7   GLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD 66

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
             V  +N L+ A  R   +     +   M   G+ P+V+TYNLLI A C    +  A ++
Sbjct: 67  PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            DEM R+G  PD +++  ++ G C  G ++EA    A+
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAE 164


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 223/508 (43%), Gaps = 47/508 (9%)

Query: 96  ENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           E+L+ L  MR+ G  P    +   +R  + V       G  G+   L R MI+ G  P  
Sbjct: 226 ESLEILSRMREVGVRPSSSAISILFRLLLRV-------GDYGSVWKLLRGMIRDGPRPCN 278

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
              N ++   C+ G L  A+ ++  M +    P+   YN  I  Y        AL     
Sbjct: 279 HNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHL 338

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  NG +P+ +T + ++ A C +G + +A K    +    +   + +V     LM  YFK
Sbjct: 339 MIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGI---QEVGLSPNVAMYNTLMSGYFK 395

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLING---------------------------- 305
             D  QA  L+ +M  K I  D   +N+L+ G                            
Sbjct: 396 ARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSL 455

Query: 306 -------FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
                   C  G +  A  +   ML++G  P V+ +N+++    + G  D A   Y ++ 
Sbjct: 456 YDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIML 515

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G+ P   +  +++ GL   G + +AR+ L  M++K +      + V++DGY + GD +
Sbjct: 516 MFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTA 575

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A S+   M + G+  +   F+A I   ++ G + +A+    EM   G  P+ F YN LI
Sbjct: 576 GAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLI 635

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              CN G +H AL+L  EM ++G+ PDI T   +I G C  G MK A + FA++  +G+ 
Sbjct: 636 HGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVT 695

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQK 566
            D + +  L   Y ++ +   A +   K
Sbjct: 696 PDTVTYNTLIGGYCKVLDMVSADEFLNK 723



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 199/436 (45%), Gaps = 11/436 (2%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   +  +I    + G+   AL     MI+ G  P ++T + ++   C  G++ +A  
Sbjct: 310 EPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARK 369

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +   + E+  SPN A YN  ++GY +  ++ +A  L+  M + GI P+  T NILV    
Sbjct: 370 IFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNY 429

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN----GDKFQALALWNDMFQK 290
           K G   D+ +   +        + S ++    L D         G   +A+    DM +K
Sbjct: 430 KYGKEADSYELFRDW-------SLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEK 482

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            +   +VA+N +I  +   G   +A   +  ML  G +P   T +++L  L K+G+L EA
Sbjct: 483 GMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEA 542

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                 +   G+  +++++  ++ G    GD   A      M  + + P+   ++  IDG
Sbjct: 543 RDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDG 602

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             + G +  A+     M   G   N F +N+LI      G + +A  L++EM   G+ PD
Sbjct: 603 LSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPD 662

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           +FT N++I   C  G +  A   + EM   G+TPD +TY  LI G+C   +M  A+E   
Sbjct: 663 IFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLN 722

Query: 531 KIQTLGLAIDHIPFRI 546
           K+   G   D   + I
Sbjct: 723 KMYASGWDPDITTYNI 738



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 205/441 (46%), Gaps = 10/441 (2%)

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           RD+C       A  L  +M  KG  PD  T N LV    K G    +  + R+ S     
Sbjct: 397 RDVC------QANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLV 450

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+C+ Y+  + G C   +LD+A+     M   G+ P+ V  N ++ A  + G   +A K 
Sbjct: 451 PDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKA 510

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
              +L    G   S    S++L+    K G   +A  L   M  K +  + VA+ VL++G
Sbjct: 511 YKIMLMF--GLVPSSSTCSSMLL-GLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDG 567

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           +   GD + A + + +M  RG  PD I ++  ++ L K G ++EA   +  +SK G  P+
Sbjct: 568 YFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPN 627

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
              Y ++I GLC  G + +A +    M +K ++P+    N+II+G+ + G + +AF    
Sbjct: 628 NFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFA 687

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   GV+ +  T+N LI    +   +  A     +M   G  PD+ TYN+ I   C+  
Sbjct: 688 EMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQ 747

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            I  A+ + DE++  G+ P+ +TY  ++   C    +  A  + AK+  +    + +   
Sbjct: 748 KISRAVTMLDELIAVGVVPNTVTYNTMMNAVCT-DMLDRAMVLTAKLLKMAFVPNVVTTN 806

Query: 546 ILKKRYRRMKESDKARDIHQK 566
           +L   + +    +KA    QK
Sbjct: 807 VLLSHFCKQGMPEKALIWGQK 827



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 186/414 (44%), Gaps = 42/414 (10%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK   +  L R       VPD   ++  V  LC  G L++A   + +M E    P+   +
Sbjct: 432 GKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAF 491

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N+ I  Y R    D A   +  M   G+ P+  T + ++  L KKG L +A   L +++ 
Sbjct: 492 NSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMI- 550

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            D G   + V   T+L+D YFK GD   A +LW +M  + I  D +A++  I+G    G 
Sbjct: 551 -DKGLPVNKV-AFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGL 608

Query: 312 ISSAFAYFCQMLKRGF-----------------------------------LPDVITYNT 336
           +  A+  F +M K+GF                                   LPD+ T N 
Sbjct: 609 VEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNI 668

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           ++N  CK+G++  A   +  +   GV PD ++Y T+I G C   D+V A EFL  M    
Sbjct: 669 IINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASG 728

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD-A 455
             P+   +N+ I G+     +S A ++ D +++ GV  N  T+N ++ A      + D A
Sbjct: 729 WDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCT--DMLDRA 786

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             L  ++L     P+V T N+L+   C  G    AL ++ + L + +  D I Y
Sbjct: 787 MVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKAL-IWGQKLNKLLRADFIGY 839



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 39/228 (17%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC  GK+  AL L R+M QKG +PD+ T N ++N  CK G ++ A     EM  +
Sbjct: 633 SLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHI 692

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  TYN  I GYC+V ++  A    + M  +G  P+  T+NI +   C    +  A
Sbjct: 693 GVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRA 752

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V  L E++A                                        +  + V YN +
Sbjct: 753 VTMLDELIA--------------------------------------VGVVPNTVTYNTM 774

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
           +N  C +  +  A     ++LK  F+P+V+T N LL+  CKQG  ++A
Sbjct: 775 MNAVCTDM-LDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKA 821



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/327 (21%), Positives = 137/327 (41%), Gaps = 35/327 (10%)

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L E +  +  K  SD      LM  +  +   +++L + + M +  ++    A ++L   
Sbjct: 193 LVEFMWANHHKYESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRL 252

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL------------------ 347
               GD  S +     M++ G  P    +N ++ C C++G L                  
Sbjct: 253 LLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPD 312

Query: 348 -----------------DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
                             +A  F  ++ K G  P  I++ TII   C  G++V+AR+   
Sbjct: 313 VYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFE 372

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            + E  + P   ++N ++ GY +  D+  A  + + M   G++ +  TFN L+    + G
Sbjct: 373 GIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYG 432

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
              D++ L ++  L  + PD   Y++ +   C  G +  A+Q  ++ML +G+ P ++ + 
Sbjct: 433 KEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFN 492

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGL 537
            +I  +   G    A + +  +   GL
Sbjct: 493 SVIAAYSRAGFEDNAHKAYKIMLMFGL 519


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 189/400 (47%), Gaps = 44/400 (11%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDLEKADHV 175
           D   +  ++R  CL G++  A+ L R+M Q+ G  P    +N+ V+ LCK G + +A  V
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           ++ M +    P+  T+N  I G C+   LD+A  +   M  +G   N VT+N L++ L  
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G  G+AV  +        G  T+                                   D
Sbjct: 137 AGRSGEAVLVM-------QGMTTT----------------------------------PD 155

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLDEASHFY 354
              YN +I+GFC +G+I  A+ +  +M +R G  PD  TY+ L+N LCK   L +A    
Sbjct: 156 TQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELL 215

Query: 355 G-VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             ++ +       +++ T++ G C   D+ +ARE L SMLE    P+   ++ IIDG  R
Sbjct: 216 QEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCR 275

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
           CGD+   F++ + M+S G   +V T+  L+    + G + +A  L K ML DG  P+  T
Sbjct: 276 CGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVT 335

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           Y+L+    C +  + +A  L   +  +G   D++ +  L+
Sbjct: 336 YSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 177/385 (45%), Gaps = 12/385 (3%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
           TY   +  +C   EL  A+ L   M    G+ P    +N  VHALCK G + +A++ +  
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +    DG    DV+T   L+    K G   +A  + ++M +     ++V YN LING   
Sbjct: 80  M---KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL-SKTGVAPDQI 367
            G    A      M      PD  TYN +++  CK G++D A  F   +  + G +PD  
Sbjct: 137 AGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSML-EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           +Y  +I GLC   ++ KA E L  M+  K        +N ++DGY +  DL  A  +   
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           ML  G + +V T++ +I    R G +   F+L ++M+  G  PDV TY +L+   C  G 
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A +L   ML  G TP+ +TY+ +  G C    +  A ++   I+  G   D + F  
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEA 373

Query: 547 LKKRYRRMKESDKARDIHQKWLLRN 571
           L      +K+    R   QKW L  
Sbjct: 374 L---LLSVKKRLLDRAAFQKWKLET 395



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 44/265 (16%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDLEK 171
           T   D + + A+I   C  G+I  A     +M Q+ G  PD  T++ L+N LCK  +L K
Sbjct: 151 TTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRK 210

Query: 172 ADHVIREMSEMRPSPNCAT---YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           AD +++EM   +    CA+   +N  + GYC+  +LD+A  L S+M  +G  P+ VT++ 
Sbjct: 211 ADELLQEMIGRKDC--CASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYST 268

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++  LC                                      + GD  +  AL   M 
Sbjct: 269 IIDGLC--------------------------------------RCGDVDKGFALLEKMV 290

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            +  + D+V Y VL+ G C  G +  A     +ML+ G  P+ +TY+ + + LCK  KLD
Sbjct: 291 SRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLD 350

Query: 349 EASHFYGVLSKTGVAPDQISYKTII 373
            A+     +   G   D ++++ ++
Sbjct: 351 MANDLLTSIRDKGRITDVVAFEALL 375


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 214/447 (47%), Gaps = 19/447 (4%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL     M++    P + + N+L++ L KI    +   +  +M     S +  T N  + 
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
             C VN L +    F+ +   G  PN VT+N L+  LC +  + +A +     L      
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF---LRMQKLG 169

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDM------FQKNIQTDIVAYNVLINGFCLNG 310
            T DV+T   L+      G+   AL L  +M      ++ N + +++ YN++++G C  G
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 311 DISSAFAYF----------CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
               A   F           +ML +G  PD++T+N L++ LCK+GK+ EA    GV+ ++
Sbjct: 230 REDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 289

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ PD ++Y ++I+G C+ GD+  ARE  +SM  K   P+   +NV+I+GY +   +  A
Sbjct: 290 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 349

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + ML  G   NV T+++L+      G + DA  L   M   GI  + +TY + +  
Sbjct: 350 MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG 409

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    +  A++L+ E+       +I     LI G C  G ++ A E+F K+   G   +
Sbjct: 410 LCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPN 469

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKW 567
            + + I+   + R  + DKA  + QK 
Sbjct: 470 VVTYTIMIHGFCREGQVDKANVLIQKM 496



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 212/450 (47%), Gaps = 20/450 (4%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           RCTL         ++  LC   ++         ++++G  P+++T+N L+  LC    + 
Sbjct: 104 RCTLNI-------LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRIS 156

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN------GIRPNRV 224
           +A  +   M ++  +P+  TY   I G C    ++ AL L   M N+        +PN +
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVI 216

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADD-------DGKATSDVITSTILMDSYFKNGDK 277
           T+NI+V  LCK G   +A +   E+           D     D++T  +L+D+  K G  
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKV 276

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +A  L   M +  I  D+V YN LI GFC+ GD++SA   F  M  +G  PDVI+YN L
Sbjct: 277 IEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVL 336

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +N   K  K++EA   Y  +   G  P+ I+Y ++++G+ + G +  A++    M    +
Sbjct: 337 INGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGI 396

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
               + + + +DG  +   L  A  +   + S      +   N LI    + G +  A+ 
Sbjct: 397 AENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWE 456

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L +++  +G  P+V TY ++I   C  G +  A  L  +M   G TPDIITY  L++G  
Sbjct: 457 LFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFY 516

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
               ++E  ++  ++    ++ D I   I+
Sbjct: 517 ESNKLEEVVQLLHRMAQKDVSPDAITCSIV 546



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 201/439 (45%), Gaps = 16/439 (3%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L  +M   G   D  T N L+N LC +  L +       +     SPN  TYN  I G C
Sbjct: 91  LYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLC 150

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD---DDGK 256
             + + +A  LF  M   G  P+ VT+  L+  LC  G +  A+K   E+L D    +  
Sbjct: 151 MEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEIN 210

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALW----------NDMFQKNIQTDIVAYNVLINGF 306
              +VIT  I++D   K G + +A  L+          N+M  + +Q D+V +NVLI+  
Sbjct: 211 CKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTL 270

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C  G +  A      M++ G +PD++TYN+L+   C  G L+ A   +  +   G  PD 
Sbjct: 271 CKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDV 330

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           ISY  +I G      + +A +    ML     P    ++ ++ G    G + +A  +  +
Sbjct: 331 ISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSV 390

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M + G++ N +T+   +    +   +F+A  L  E+       ++   N LI   C  G 
Sbjct: 391 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 450

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A +L++++   G  P+++TYT +I G C  G + +A  +  K++  G   D I +  
Sbjct: 451 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 510

Query: 547 LKKRYRRMKESDKARDIHQ 565
           L    R   ES+K  ++ Q
Sbjct: 511 L---MRGFYESNKLEEVVQ 526



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 148/300 (49%), Gaps = 31/300 (10%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           Q  +L+N M    + +D    N+L+N  C    +   FA F  +L+RG+ P+++TYNTL+
Sbjct: 87  QVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLI 146

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML----- 393
             LC + ++ EA+  +  + K G  PD ++Y T+I+GLC  G+I  A +    ML     
Sbjct: 147 KGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISR 206

Query: 394 -EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
            E +  P    +N+I+DG  + G    A  + + M + G+  N                 
Sbjct: 207 YEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPN----------------- 249

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
                   EML  G+ PD+ T+N+LI   C  G +  A +L   M+  GI PD++TY  L
Sbjct: 250 --------EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSL 301

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           I+G C  G++  A E+F  + + G   D I + +L   Y +  + ++A  ++ + LL  K
Sbjct: 302 IEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGK 361



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 157/317 (49%), Gaps = 9/317 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D      +I  LC  GK+  A  L   MI+ G VPD++T+N L+   C +GDL  A 
Sbjct: 256 LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAR 315

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M      P+  +YN  I GY +  ++++A+ L++ M   G RPN +T++ L+  +
Sbjct: 316 ELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGI 375

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
              G + DA K    + A        +  T  I +D   KN   F+A+ L+ ++   N +
Sbjct: 376 FLAGKVDDAKKLFSVMKAHG---IAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFK 432

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +I   N LI+G C  G + +A+  F ++   G  P+V+TY  +++  C++G++D+A+  
Sbjct: 433 LEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVL 492

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID---- 409
              +   G  PD I+Y T+++G      + +  + L  M +K V P+    ++++D    
Sbjct: 493 IQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK 552

Query: 410 --GYGRCGDLSNAFSIR 424
              Y  C  L   F I+
Sbjct: 553 DEKYQECLHLLPRFPIQ 569



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 177/407 (43%), Gaps = 54/407 (13%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM--- 179
            +I+ LC+  +I  A  L  +M + G  PDV+T+  L+  LC  G++  A  + +EM   
Sbjct: 144 TLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLND 203

Query: 180 ---SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR----------VTH 226
               E+   PN  TYN  + G C+V   D+A  LF  M   G+ PN           VT 
Sbjct: 204 ISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTF 263

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           N+L+  LCK+G + +A K LG ++   +     D++T   L++ +   GD   A  L+  
Sbjct: 264 NVLIDTLCKEGKVIEAKKLLGVMI---ESGIVPDLVTYNSLIEGFCMVGDLNSARELFVS 320

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL-------- 338
           M  K  + D+++YNVLING+     +  A   + +ML  G  P+VITY++LL        
Sbjct: 321 MPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGK 380

Query: 339 ---------------------------NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
                                      + LCK   L EA   +  L  +    +  +   
Sbjct: 381 VDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNC 440

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC  G +  A E    +  +   P    + ++I G+ R G +  A  +   M + G
Sbjct: 441 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 500

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            + ++ T+N L+        + +   L   M    + PD  T ++++
Sbjct: 501 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 547



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 148/317 (46%), Gaps = 15/317 (4%)

Query: 67  KTRHWFSNKDSDNEGNPQAV-FNAL-DLILKENL-----DRLKTMRDTGPVRCTLETDYR 119
           KT+    N+  D    P  V FN L D + KE         L  M ++G V      D  
Sbjct: 242 KTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIV-----PDLV 296

Query: 120 RHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
            + ++I   C+ G + +A  L   M  KG  PDV+++N L+N   K   +E+A  +  EM
Sbjct: 297 TYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEM 356

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
             +   PN  TY++ + G     ++D A  LFS M  +GI  N  T+ I +  LCK   L
Sbjct: 357 LLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCL 416

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +A+K   E+ + +      ++     L+D   K G    A  L+  +  +  + ++V Y
Sbjct: 417 FEAMKLFTELKSSNFKLEIENL---NCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTY 473

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
            ++I+GFC  G +  A     +M   G  PD+ITYNTL+    +  KL+E       +++
Sbjct: 474 TIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQ 533

Query: 360 TGVAPDQISYKTIIQGL 376
             V+PD I+   ++  L
Sbjct: 534 KDVSPDAITCSIVVDML 550



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 2/175 (1%)

Query: 396 SVVPEPHIWNVIIDGYGRCGDLS--NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           S +P P+        + + G+++  +A     LM+    + ++ +FN L+    +     
Sbjct: 27  SAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYS 86

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
             FSL  +M L G+  D  T N+L+   CN+  +      +  +LRRG +P+I+TY  LI
Sbjct: 87  QVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLI 146

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           KG C    + EA  +F ++Q LG   D + +  L K        + A  +HQ+ L
Sbjct: 147 KGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEML 201


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 201/380 (52%), Gaps = 4/380 (1%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           +V    ++G L++A  ++ EM      PN  T N  I     +  ++ A  LF  M   G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           ++P+ +++ ++V   CK G + +A K+L  +L   +     D  T T+++  +   G   
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVML---ERGFVVDNATFTLIISRFSGKGYTT 257

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +AL  +  +    ++ +++ +  +I G C  G I  AF    +M+ +G+ P+V T+ +L+
Sbjct: 258 RALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLI 317

Query: 339 NCLCKQGKLDEASH-FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           + LCK+G  ++A   F  ++      P+ ++Y  +I G C    + +A   L  M E+ +
Sbjct: 318 DGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGL 377

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           VP  + +  +IDG+ + G+   A+ + +LM S G S N+ T+NA++    + G + +A+ 
Sbjct: 378 VPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYK 437

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           + ++   +G+ PD FTYN+L+   C   +I  AL L+++ML+ GI PDI +YT LI   C
Sbjct: 438 MLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFC 497

Query: 518 ARGNMKEAEEVFAKIQTLGL 537
               MKE+E  F +   +G+
Sbjct: 498 RENRMKESEMFFEEAVRIGI 517



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 216/447 (48%), Gaps = 11/447 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           LKE ++ +  M + G V  T   ++     +I+     G +  A  L  +M  +G  PD 
Sbjct: 151 LKEAVEMVIEMHNQGLVPNTRTLNW-----IIKVTSEMGLVEYAELLFEEMCVRGVQPDS 205

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +++  +V   CKIG++ +AD  +  M E     + AT+   I+ +       +AL  F  
Sbjct: 206 ISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRR 265

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTILMDSYF 272
           + + G+ PN +    ++  LCK+G +  A + L E++    GK    +V T T L+D   
Sbjct: 266 LVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMV----GKGWKPNVYTHTSLIDGLC 321

Query: 273 KNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
           K G   +A  L+  + + +N + +++ Y  +I+G+C    ++ A     +M ++G +P+ 
Sbjct: 322 KKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNT 381

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            TY TL++  CK G  + A     ++S  G +P+  +Y  I+ GLC  G + +A + L  
Sbjct: 382 NTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLED 441

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
             +  + P+   +N+++  + +  ++  A ++ + ML  G+  ++ ++  LI    R   
Sbjct: 442 GFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENR 501

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + ++    +E +  GI P   TY  +I   C  G++ LA++ +  +   G  PD ITY  
Sbjct: 502 MKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGA 561

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLA 538
           +I G C +    EA  ++  +   GL 
Sbjct: 562 IISGLCKQSKRDEARSLYDSMIEKGLV 588



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 173/389 (44%), Gaps = 7/389 (1%)

Query: 133 KIGTAL----WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           KIG  L    WL   M+++G V D  T   +++     G   +A    R + +M   PN 
Sbjct: 217 KIGNILEADKWLS-VMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNL 275

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             +   I G C+   + +A  +   M   G +PN  TH  L+  LCKKG    A +   +
Sbjct: 276 INFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLK 335

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           ++  ++ K   +V+T T ++  Y +     +A  L + M ++ +  +   Y  LI+G C 
Sbjct: 336 LVRSENHKP--NVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCK 393

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G+   A+     M   GF P++ TYN ++N LCK+G++ EA        + G+ PD+ +
Sbjct: 394 AGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFT 453

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  ++   C   +I +A      ML+  + P+ H +  +I  + R   +  +    +  +
Sbjct: 454 YNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAV 513

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G+     T+ ++I    R G++  A      +   G  PD  TY  +I   C      
Sbjct: 514 RIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRD 573

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHC 517
            A  LYD M+ +G+ P  +T   L   +C
Sbjct: 574 EARSLYDSMIEKGLVPCEVTRITLAYEYC 602



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 39/293 (13%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQ-KGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
           H ++I  LC  G    A  L  K+++ +   P+VLT+  +++  C+   L +A+ ++  M
Sbjct: 313 HTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRM 372

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
            E    PN  TY   I G+C+    ++A  L + M++ G  PN  T+N +V+ LCK+G +
Sbjct: 373 KEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRV 432

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +A K L +   +       D  T  ILM  + K  +  QALAL+N M +  IQ DI +Y
Sbjct: 433 QEAYKMLEDGFQNG---LKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSY 489

Query: 300 NVLIN-----------------------------------GFCLNGDISSAFAYFCQMLK 324
             LI                                    G+C  G+++ A  +F ++  
Sbjct: 490 TTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSD 549

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            G  PD ITY  +++ LCKQ K DEA   Y  + + G+ P +++  T+    C
Sbjct: 550 HGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYC 602



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 119/238 (50%), Gaps = 1/238 (0%)

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           ++  F   G +  A     +M  +G +P+  T N ++    + G ++ A   +  +   G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V PD ISY+ ++   C  G+I++A ++L  MLE+  V +   + +II  +   G  + A 
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
                ++  G+  N+  F  +I    + GSI  AF + +EM+  G  P+V+T+  LI   
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 482 CNLGHIHLALQLYDEMLR-RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
           C  G    A +L+ +++R     P+++TYT +I G+C    +  AE + ++++  GL 
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLV 378



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 140/342 (40%), Gaps = 42/342 (12%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +++S+ + G   +A+ +  +M  + +  +    N +I      G +  A   F +M  RG
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGV------------------------------ 356
             PD I+Y  ++   CK G + EA  +  V                              
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 357 -----LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                L   G+ P+ I++  +I+GLC  G I +A E L  M+ K   P  +    +IDG 
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 412 GRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            + G    AF +   L+ S     NV T+ A+I    R   +  A  L   M   G+ P+
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             TY  LI   C  G+   A  L + M   G +P++ TY  ++ G C RG ++EA ++  
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
                GL  D   + IL      M E  K  +I Q   L NK
Sbjct: 441 DGFQNGLKPDKFTYNIL------MSEHCKQENIRQALALFNK 476



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 32/255 (12%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I   C   K+  A  L  +M ++G VP+  T+  L++  CK G+ E+A  ++  MS
Sbjct: 349 YTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMS 408

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               SPN  TYNA + G C+   + +A  +      NG++P++ T+NIL+   CK+  + 
Sbjct: 409 SEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIR 468

Query: 241 DAVKFLGEVLA---DDDGKATSDVI-----------------------------TSTILM 268
            A+    ++L      D  + + +I                             T T ++
Sbjct: 469 QALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMI 528

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
             Y + G+   A+  ++ +       D + Y  +I+G C       A + +  M+++G +
Sbjct: 529 CGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLV 588

Query: 329 PDVITYNTLLNCLCK 343
           P  +T  TL    CK
Sbjct: 589 PCEVTRITLAYEYCK 603



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 58/122 (47%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I   C   ++  +     + ++ G +P   T+  ++   C+ G+L  A 
Sbjct: 482 IQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAM 541

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
                +S+   +P+  TY A I+G C+ ++ D+A  L+ +M   G+ P  VT   L +  
Sbjct: 542 KFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEY 601

Query: 234 CK 235
           CK
Sbjct: 602 CK 603



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 65/143 (45%)

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
            +   +++ +   G L  A  +   M + G+  N  T N +I   +  G +  A  L +E
Sbjct: 136 EVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEE 195

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           M + G+ PD  +Y +++   C +G+I  A +    ML RG   D  T+T +I     +G 
Sbjct: 196 MCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGY 255

Query: 522 MKEAEEVFAKIQTLGLAIDHIPF 544
              A   F ++  +GL  + I F
Sbjct: 256 TTRALWYFRRLVDMGLEPNLINF 278


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 211/412 (51%), Gaps = 8/412 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E  YR    ++   C   ++  AL +   MI+ G VP     +++++EL K   +E+A  
Sbjct: 268 EVTYR---TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  ++ ++   PN   YNA I   C+    D A  LF  MA  G+ PN VT+ IL+HALC
Sbjct: 325 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G++ DA+  L + + D   K T  V     L++ Y K G   +A  L + M ++ +  
Sbjct: 385 KRGMIEDAL-CLFDKMRDKGIKVT--VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTP 441

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
              +Y+ LI G C NGD+SSA     +M +RG   +  T+  L+N  CK  K+DEA+  +
Sbjct: 442 TAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +  + V P+++++  +I+G C+ G+I KA +    M+E  + P+ + +  +I G    
Sbjct: 502 DKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLT 561

Query: 415 GDLSNAFS-IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             +S A   + DL  S+ V +N F+  AL+    R G   + + L  EM + G+  D+ +
Sbjct: 562 SGVSKANEFVADLENSYAVLNN-FSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVS 620

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           + +++ A+        +  L+ EM  +G+ PD I YT +I       NM +A
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQA 672



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 222/451 (49%), Gaps = 5/451 (1%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           +LDR + +  +G V+  L      +  +I  LC  G + +A+ L R+M ++G   +  T 
Sbjct: 423 SLDRARGLL-SGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTF 481

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
             L+N  CK   +++A  +  +M +    PN  T+N  I GYC V  + KA  L+  M  
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 541

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G++P+  T+  L+  LC    +  A +F+ ++   ++  A  +  + T L+   F+ G 
Sbjct: 542 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADL---ENSYAVLNNFSLTALLYGLFREGR 598

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +   LW++M  + ++ D+V++ +++       D   +   F +M ++G  PD I Y  
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 658

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           +++ L K+  + +A + +  +   G +P+ +++  +I  LC  G +  A      ML  +
Sbjct: 659 MIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           V+P    +N  +D +   GD+  A  +   ML  G  +++ +FN LI    + G I +A 
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAI 777

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L +++   G  PD  +Y+ +I   C +G I+ A +L++EML +G+ PD++ Y   I+  
Sbjct: 778 DLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 837

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
              G   +A  ++  +   G+  +   +R L
Sbjct: 838 NVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 219/476 (46%), Gaps = 10/476 (2%)

Query: 96  ENLDRL-KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           ++ DRL K M   G     LE +   +  +I  LC  G I  AL L  KM  KG    V 
Sbjct: 355 DDADRLFKEMAGRG-----LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
            +N L+N  CK G L++A  ++  M +   +P  A+Y+  I G CR  +L  A+ L   M
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREM 469

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
           A  GI  N  T   L++  CK   + +A +   +++   D     + +T  ++++ Y   
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI---DSNVIPNEVTFNVMIEGYCLV 526

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G+  +A  L++ M +  ++ D   Y  LI+G CL   +S A  +   +     + +  + 
Sbjct: 527 GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSL 586

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
             LL  L ++G+  E  H +  ++  GV  D +S+  I+       D  K+      M E
Sbjct: 587 TALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 646

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           + V P+   +  +ID   +  ++  A +  D M+  G S N  T   LI    + G +  
Sbjct: 647 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGS 706

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L KEML   + P+ FTYN  +      G +  A  L+  ML +G    I+++  LIK
Sbjct: 707 AELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIK 765

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           G C  G ++EA ++  KI   G + D I +  +     +M + +KA ++  + L +
Sbjct: 766 GLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 224/511 (43%), Gaps = 72/511 (14%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC   +   A  L ++M  +G  P+ +T+  L++ LCK G +E A  +  +M + 
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
                   YN+ I GYC+   LD+A  L S M   G+ P   +++ L+  LC+ G L  A
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSA 462

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++   E+   + G A ++  T T L++ + K+    +A  L++ M   N+  + V +NV+
Sbjct: 463 MELHREMA--ERGIAWNNY-TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVM 519

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC-------------------- 342
           I G+CL G+I  AF  + QM++ G  PD  TY +L++ LC                    
Sbjct: 520 IEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYA 579

Query: 343 ---------------KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
                          ++G+  E  H +  ++  GV  D +S+  I+       D  K+  
Sbjct: 580 VLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCV 639

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M E+ V P+   +  +ID   +  ++  A +  D M+  G S N  T   LI    
Sbjct: 640 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLC 699

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYN-------------------------------- 475
           + G +  A  L KEML   + P+ FTYN                                
Sbjct: 700 KSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVS 759

Query: 476 --LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
             +LI   C  G I  A+ L  ++   G +PD I+Y+ +I   C  G++ +A E++ ++ 
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
             GL  D + + I  +      ESDKA  I+
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIY 850



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 189/397 (47%), Gaps = 15/397 (3%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM+Q G   D   +   +   C+  +L+ A  ++  M       +   YN  + G C+  
Sbjct: 188 KMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNM 247

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF------LGEVLADDDGK 256
            + +A+ + + M N G+  + VT+  LV+  C+   L  A++       LG V ++ +  
Sbjct: 248 RVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCS 307

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D +    L++  F    K   L +  ++F         AYN LI+  C N     A 
Sbjct: 308 FMIDELRKKELVEEAFSLACKLGDLGMVPNVF---------AYNALIDKLCKNERFDDAD 358

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F +M  RG  P+ +TY  L++ LCK+G +++A   +  +   G+      Y ++I G 
Sbjct: 359 RLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 418

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G + +AR  L  M+++ + P    ++ +I G  R GDLS+A  +   M   G++ N 
Sbjct: 419 CKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNN 478

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           +TF ALI    +   + +A  L  +M+   + P+  T+N++I   C +G+I  A QLYD+
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 538

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           M+  G+ PD  TY  LI G C    + +A E  A ++
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 199/441 (45%), Gaps = 5/441 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A IR  C    +  A  L  +M  +G     + +N L+  LCK   +++A  V   M 
Sbjct: 201 YTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMV 260

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            +  + +  TY   + G+CR+ EL+ AL +   M   G  P+    + ++  L KK L+ 
Sbjct: 261 NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVE 320

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A     ++    D     +V     L+D   KN     A  L+ +M  + ++ + V Y 
Sbjct: 321 EAFSLACKL---GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 377

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI+  C  G I  A   F +M  +G    V  YN+L+N  CKQG LD A      + K 
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P   SY  +I GLC +GD+  A E    M E+ +    + +  +I+G+ +   +  A
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + D M+   V  N  TFN +I      G+I  AF L  +M+  G+ PD +TY  LI  
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    +  A +   ++       +  + T L+ G    G   E   ++ ++   G+ +D
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLD 617

Query: 541 HIPFRILKKRYRRMKESDKAR 561
            + F I+   Y  +K+ DK +
Sbjct: 618 LVSFTIIV--YAALKQHDKEK 636



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 196/403 (48%), Gaps = 3/403 (0%)

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           +  G   +  T + ++  L KI     A  +  +M +     +   Y A I  YC    L
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D A  L   M + G++ + V +N+L++ LCK   + +AV+    ++   +   T+D +T 
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMV---NIGVTADEVTY 271

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
             L+  + +  +   AL + +DM +          + +I+       +  AF+  C++  
Sbjct: 272 RTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGD 331

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G +P+V  YN L++ LCK  + D+A   +  ++  G+ P++++Y  +I  LC  G I  
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A      M +K +    + +N +I+GY + G L  A  +   M+  G++    +++ LI 
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 451

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              R G +  A  L +EM   GI  + +T+  LI   C    +  A +L+D+M+   + P
Sbjct: 452 GLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + +T+  +I+G+C  GN+++A +++ ++  +GL  D+  +R L
Sbjct: 512 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 154/354 (43%), Gaps = 37/354 (10%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   CL G I  A  L  +M++ G  PD  T+  L++ LC    + KA+  + ++    
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 578

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  +  A + G  R     +  HL+  MA  G++ + V+  I+V+A  K+     + 
Sbjct: 579 AVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 638

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+    +     D I  T ++D+  K  +  QAL  W+ M       + V + VLI
Sbjct: 639 VLFREM---KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLI 695

Query: 304 NGFCLNGDISSA----------------FAYFC------------------QMLKRGFLP 329
           N  C +G + SA                F Y C                    + +G L 
Sbjct: 696 NNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA 755

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
            ++++N L+  LCK GK+ EA      ++++G +PD ISY TII  LC  GDI KA E  
Sbjct: 756 SIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELW 815

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
             ML K + P+   +N+ I      G+   A  I   M+  GV  N  T+ AL+
Sbjct: 816 NEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 869



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 140/288 (48%), Gaps = 4/288 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  L   G+      L  +M  +G   D+++   +V    K  D EK+  + REM E 
Sbjct: 588 ALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 647

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   Y   I    +   + +AL+ +  M  +G  PN VTH +L++ LCK G LG A
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSA 707

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+LA   G    +  T    +D +   GD  +A  L + M Q ++ + IV++N+L
Sbjct: 708 ELLCKEMLA---GNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLAS-IVSFNIL 763

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G C  G I  A     ++ + GF PD I+Y+T+++ LCK G +++A   +  +   G+
Sbjct: 764 IKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 823

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            PD ++Y   I+   +HG+  KA     +M+   V P    +  ++ G
Sbjct: 824 KPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 140/334 (41%), Gaps = 39/334 (11%)

Query: 277 KFQALALWNDMFQKNIQT----DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K +  AL  D+F K +Q+    D   Y   I  +C + ++  A     +M   G     +
Sbjct: 175 KIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAV 234

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            YN L+  LCK  ++ EA     V+   GV  D+++Y+T++ G C   ++  A      M
Sbjct: 235 PYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDM 294

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--------- 443
           +    VP     + +ID   +   +  AFS+   +   G+  NVF +NALI         
Sbjct: 295 IRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERF 354

Query: 444 ------LAETRG--------------------GSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
                   E  G                    G I DA  L  +M   GI   V+ YN L
Sbjct: 355 DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSL 414

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I   C  G +  A  L   M++ G+TP   +Y+ LI G C  G++  A E+  ++   G+
Sbjct: 415 INGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGI 474

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           A ++  F  L   + + K+ D+A  +  K +  N
Sbjct: 475 AWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 68/111 (61%), Gaps = 2/111 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC  GKI  A+ L RK+ + G  PD ++++ +++ELCK+GD+ KA  +  EM    
Sbjct: 763 LIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822

Query: 184 PSPNCATYNAFITGYCRVN-ELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             P+   YN FI  +C V+ E DKAL +++ M  +G++PN  T+  L+  +
Sbjct: 823 LKPDVVAYNIFIR-WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 63/138 (45%)

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
           L LS G++ N +T + ++ +  +      A  L  +ML  G+  D + Y   I A C   
Sbjct: 153 LSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESR 212

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           ++  A  L   M   G+    + Y  L+ G C    ++EA EV   +  +G+  D + +R
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 272

Query: 546 ILKKRYRRMKESDKARDI 563
            L   + RM+E + A  I
Sbjct: 273 TLVYGFCRMEELEMALRI 290


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 234/495 (47%), Gaps = 37/495 (7%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V C    +     ++++  C+ G + +AL L  ++ + G VP+ +T++ L++  CK G++
Sbjct: 255 VNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNI 314

Query: 170 EKADHVIREMSE--MRPS--------------------------------PNCATYNAFI 195
           EKA     EM    +R S                                 N  T+N  +
Sbjct: 315 EKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLL 374

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
           +  C+  ++++A +L+  +   GI PN V++N ++   C+K  +  A K   E+L   D 
Sbjct: 375 SWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEML---DN 431

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
             T + +T TILMD YFK GD   A ++++ M   NI        ++I G C  G     
Sbjct: 432 GFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEG 491

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F + + +GF+P  + YNT+++   K+G ++ AS+ Y  + + G+ P  ++Y ++I G
Sbjct: 492 RDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDG 551

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C   +I  A + L  M  K +  +   +  +IDG+ +  D+ +A  + + +   G+S N
Sbjct: 552 FCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPN 611

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
            F +N++I       ++ +A  L K+M+ +GI  D+ TY  LI      G +  A  ++ 
Sbjct: 612 RFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHT 671

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
           EML +GI PD   +T LI G C +G  + A ++   +    +    + +  L   + +  
Sbjct: 672 EMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEG 731

Query: 556 ESDKARDIHQKWLLR 570
              +A  +H + L R
Sbjct: 732 NLQEAFRLHDEMLDR 746



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 220/458 (48%), Gaps = 10/458 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +   +  LCL    G AL L R+M   G +P   T   ++    K G++ +A 
Sbjct: 189 VELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEAL 248

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  +M     S N A   + + GYC    L  AL L + ++ +G+ PN+VT+++L+   
Sbjct: 249 RLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGC 308

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G +  A +F  E+         S V +   +++ Y K      A  ++ND  +  + 
Sbjct: 309 CKNGNIEKAFEFYSEMKTKG---IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL- 364

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++  +N L++  C  G ++ A   + +++ +G  P+V++YN ++   C++  ++ A   
Sbjct: 365 ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKV 424

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  +   G  P+ +++  ++ G    GDI  A      M + +++P      +II G  +
Sbjct: 425 YKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCK 484

Query: 414 CGDLSNAFSIRDLMLSF---GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            G    +F  RDL   F   G       +N +I    + G+I  A ++ +EM   GI P 
Sbjct: 485 AG---RSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPS 541

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             TY  LI   C   +I LAL+L ++M R+G+  DI  Y  LI G C R +MK A E+  
Sbjct: 542 TVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLN 601

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +++  GL+ +   +  +   ++ M   ++A D+++K +
Sbjct: 602 ELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMV 639



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 175/383 (45%), Gaps = 32/383 (8%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  GK+  A  L  ++I KG  P+V+++N ++   C+  ++  A  V +EM +   +PN
Sbjct: 377 LCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPN 436

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             T+   + GY +  +++ A  +F  M +  I P   T  I++  LCK G   +      
Sbjct: 437 AVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFN 496

Query: 248 EVLADD------------DG--------------------KATSDVITSTILMDSYFKNG 275
           + ++              DG                      T   +T T L+D + K  
Sbjct: 497 KFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGN 556

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
           +   AL L NDM +K ++ DI AY  LI+GFC   D+ SA     ++   G  P+   YN
Sbjct: 557 NIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYN 616

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           +++        ++EA   Y  +   G+  D  +Y ++I GL   G ++ A +    ML K
Sbjct: 617 SMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSK 676

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
            ++P+     V+I+G    G   NA  I + M    +  +V  +N LI    + G++ +A
Sbjct: 677 GILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEA 736

Query: 456 FSLKKEMLLDGIFPDVFTYNLLI 478
           F L  EML  G+ PD  TY++L+
Sbjct: 737 FRLHDEMLDRGLVPDNITYDILV 759



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 154/314 (49%), Gaps = 36/314 (11%)

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT------------- 336
           + ++ D  AY++ ++  CL  +   A +   +M   G++P   T+ +             
Sbjct: 187 RGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAE 246

Query: 337 -------LLNC---------------LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
                  ++NC                C QG L  A      +S++G+ P++++Y  +I 
Sbjct: 247 ALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLID 306

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C +G+I KA EF   M  K +    +  N I++GY +C    NAF++ +  L  G+ +
Sbjct: 307 GCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-A 365

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           NVFTFN L+    + G + +A +L  E++  GI P+V +YN +I   C   +I+ A ++Y
Sbjct: 366 NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVY 425

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
            EML  G TP+ +T+T L+ G+  +G+++ A  +F +++   +        I+ K   + 
Sbjct: 426 KEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKA 485

Query: 555 KESDKARDIHQKWL 568
             S + RD+  K++
Sbjct: 486 GRSFEGRDLFNKFV 499



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 136/292 (46%), Gaps = 36/292 (12%)

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC--------------------------- 342
           G+I  A  +F Q   RG   D   Y+  ++ LC                           
Sbjct: 172 GNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTF 231

Query: 343 --------KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
                   K+G + EA      +   G + +     ++++G C+ G++  A   +  + E
Sbjct: 232 TSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISE 291

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             +VP    ++V+IDG  + G++  AF     M + G+ S+V++ N+++    +  S  +
Sbjct: 292 SGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQN 351

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           AF++  + L  G+  +VFT+N L+   C  G ++ A  L+DE++ +GI+P++++Y  +I 
Sbjct: 352 AFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIIL 410

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           GHC + N+  A +V+ ++   G   + + F IL   Y +  + + A  I  +
Sbjct: 411 GHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHR 462



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 108/219 (49%), Gaps = 3/219 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I   C G  I  AL L   M +KG   D+  +  L++  CK  D++ A  ++ E+ 
Sbjct: 545 YTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELR 604

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               SPN   YN+ ITG+  +N +++A+ L+  M N GI  +  T+  L+  L K G L 
Sbjct: 605 GAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLL 664

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A     E+L+        D    T+L++     G    A  +  DM  KN+   ++ YN
Sbjct: 665 YASDIHTEMLSKG---ILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYN 721

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            LI G    G++  AF    +ML RG +PD ITY+ L+N
Sbjct: 722 TLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 760



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 89/196 (45%)

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           ++G + EA   +      GV  DQ +Y   +  LC+  +   A   L  M     +P   
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +  +I    + G+++ A  ++D M++ G S N+    +L+      G++  A  L  E+
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
              G+ P+  TY++LI   C  G+I  A + Y EM  +GI   + +   +++G+    + 
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349

Query: 523 KEAEEVFAKIQTLGLA 538
           + A  +F      GLA
Sbjct: 350 QNAFTMFNDALESGLA 365



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 5/139 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E +D  K M + G + C L+T    + ++I  L   G++  A  +  +M+ KG +PD 
Sbjct: 628 VEEAIDLYKKMVNEG-IPCDLKT----YTSLIDGLLKSGRLLYASDIHTEMLSKGILPDD 682

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
             H  L+N LC  G  E A  ++ +M+     P+   YN  I G+ +   L +A  L   
Sbjct: 683 RAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDE 742

Query: 214 MANNGIRPNRVTHNILVHA 232
           M + G+ P+ +T++ILV+ 
Sbjct: 743 MLDRGLVPDNITYDILVNG 761


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 225/451 (49%), Gaps = 11/451 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   ++   L     ++++G +PDV+T+  L+  LC    + +A  +   M ++ 
Sbjct: 132 LINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLG 191

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANN------GIRPNRVTHNILVHALCKKG 237
             PN  TY   I G CR   ++ AL L   M N         +PN  ++NI++  LCK G
Sbjct: 192 CWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIG 251

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
              +A +   E++   D     DV+T + L+D+  K G   +A      M  + I  D+ 
Sbjct: 252 KWKEAKRLFNEMV---DQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLF 308

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            +  LI GFCL GD+ SA   F  M  +G+ PDVI+Y  L+   CK   ++EA   Y  +
Sbjct: 309 TFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEM 368

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP-HIWNVIIDGYGRCGD 416
            + G  PD  ++  +++GL + G +  A++ L  +++   VP+  +I +V +DG  + G 
Sbjct: 369 LRVGKWPDMKTFCVLLKGLFLAGKVGDAKK-LFGVVKPHAVPKNLYICSVFLDGLCKNGC 427

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L  A  + + + S+ +  ++ +FN LI    +   +  A+ L +++  +G+ PDV TY +
Sbjct: 428 LFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCI 487

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +I   C  G +  A  L+  M   G TP+++TY+ L+ G      ++E  ++  K+    
Sbjct: 488 MINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKD 547

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           +++    + I++    + ++  +  DI Q++
Sbjct: 548 VSLAASIYTIVEDMVSKDEKCREWLDILQRF 578



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 204/430 (47%), Gaps = 4/430 (0%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L +KM   G  P+  T N L+N LC +  + +    +  +      P+  TY + I G C
Sbjct: 113 LYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLC 172

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
             + + +A  LF  M   G  PN VT+  L+  LC+ G +  A+K   E+L      A +
Sbjct: 173 MEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAIN 232

Query: 260 ---DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              ++ +  I++D   K G   +A  L+N+M  + ++ D+V ++ LI+  C  G +  A 
Sbjct: 233 CKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAK 292

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            +   M+ RG +PD+ T+ +L+   C  G LD A   +  +   G  PD ISY  +I G 
Sbjct: 293 KFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGY 352

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C   ++ +A +    ML     P+   + V++ G    G + +A  +  ++    V  N+
Sbjct: 353 CKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNL 412

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           +  +  +    + G +F+A  L  E+    +  D+ ++N LI   C    +  A +L+++
Sbjct: 413 YICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEK 472

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR-ILKKRYRRMK 555
           + + G+ PD++TY  +I G C  G +  A  +F  ++  G   + + +  +L   Y+  K
Sbjct: 473 LSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNK 532

Query: 556 ESDKARDIHQ 565
             +  + +H+
Sbjct: 533 LEEVVKLLHK 542



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 200/420 (47%), Gaps = 9/420 (2%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
            +++ N L+  L KI    +   + ++M     SPN  T N  I   C VN + + L   
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
           + +   G  P+ VT+  L+  LC +  + +A +     +         +V+T   L+   
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLF---IRMQKLGCWPNVVTYGTLIKGL 206

Query: 272 FKNGDKFQALALWNDM------FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            + G+   AL L  +M      +  N + +I +YN++I+  C  G    A   F +M+ +
Sbjct: 207 CRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQ 266

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  PDV+T++ L++ LCK+G + EA  F   +   G+ PD  ++ ++I+G C+ GD+  A
Sbjct: 267 GVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSA 326

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           +E  LSM  K   P+   + V+I GY +  ++  A  + + ML  G   ++ TF  L+  
Sbjct: 327 KELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKG 386

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
               G + DA  L   +    +  +++  ++ +   C  G +  A++L++E+    +  D
Sbjct: 387 LFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLD 446

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           I ++  LI G C    ++ A E+F K+   GL  D + + I+   + +  + D A  + Q
Sbjct: 447 IESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQ 506



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 165/343 (48%), Gaps = 38/343 (11%)

Query: 102 KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           + +  T P     + +   +  +I +LC  GK   A  L  +M+ +G  PDV+T + L++
Sbjct: 221 EMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALID 280

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP 221
            LCK G + +A   +  M      P+  T+ + I G+C V +LD A  LF +M + G  P
Sbjct: 281 TLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEP 340

Query: 222 NRVTHNILVHALCK------------------------------KGL-----LGDAVKFL 246
           + +++ +L++  CK                              KGL     +GDA K  
Sbjct: 341 DVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLF 400

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
           G V          ++   ++ +D   KNG  F+A+ L+N++   N++ DI ++N LI+G 
Sbjct: 401 GVV---KPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGL 457

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C    + +A+  F ++ + G  PDV+TY  ++N  CK G++D A+  + ++ + G  P+ 
Sbjct: 458 CKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNL 517

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           ++Y  ++ G   +  + +  + L  M++K V     I+ ++ D
Sbjct: 518 LTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVED 560



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 145/296 (48%), Gaps = 11/296 (3%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           QAL  ++ M +      I+++N+L+         S  F+ + +M   G  P+  T N L+
Sbjct: 79  QALQFFDLMMR-----SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILI 133

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           NCLC   ++ E       + + G  PD ++Y ++I+GLC+   I +A    + M +    
Sbjct: 134 NCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCW 193

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLML------SFGVSSNVFTFNALILAETRGGSI 452
           P    +  +I G  R G+++ A  +   ML      +     N+F++N +I    + G  
Sbjct: 194 PNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKW 253

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +A  L  EM+  G+ PDV T++ LI   C  G +  A +  + M+ RGI PD+ T+T L
Sbjct: 254 KEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSL 313

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           I+G C  G++  A+E+F  + + G   D I + +L   Y +    ++A  ++ + L
Sbjct: 314 IEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEML 369



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 5/151 (3%)

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
           + A    DLM+      ++ +FN L+ A  +       FSL K+M L G+ P+ FT N+L
Sbjct: 78  TQALQFFDLMMR-----SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNIL 132

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I   CN+  +   L     ++RRG  PD++TYT LIKG C    + EA  +F ++Q LG 
Sbjct: 133 INCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGC 192

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             + + +  L K   R    + A  +HQ+ L
Sbjct: 193 WPNVVTYGTLIKGLCRTGNINLALKLHQEML 223


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 213/442 (48%), Gaps = 5/442 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L+ L  M D+    C    +   +  VI      G++  A  L  +M+ +G  P+V+
Sbjct: 182 EEALELLHMMADSQGRSCP--PNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVV 239

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  +++ LCK   +++A+ V ++M +    P+  TYN  I GY  + +  + + +   M
Sbjct: 240 TYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM 299

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
           + +G++P+  T+  L++ LC  G   +A  F   ++         +V    IL+  Y   
Sbjct: 300 SAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKG---IKPNVAIYGILIHGYATK 356

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +   L N M +  +  D   +N++   +     I  A   F +M ++G  PDV+ +
Sbjct: 357 GALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNF 416

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
             L++ LCK G++D+A   +  +   GVAP+   + +++ GLC      KA+EF   ML 
Sbjct: 417 GALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLN 476

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           + + P+   +N I+      G +  A  + DLM   G   +V ++  LI      G I +
Sbjct: 477 QGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDE 536

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A      ML  G+ PD +TYN L+   C  G I  A  ++ EMLR GITP ++TY+ ++ 
Sbjct: 537 AAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILH 596

Query: 515 GHCARGNMKEAEEVFAKIQTLG 536
           G        EA+E++  + T G
Sbjct: 597 GLFTTRRFSEAKELYLNMITSG 618



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 204/427 (47%), Gaps = 3/427 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  VI  LC    +  A  + ++MI KG  PD  T+N L++    IG  ++   ++ EMS
Sbjct: 241 YTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMS 300

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+C TY + +   C      +A   F +M   GI+PN   + IL+H    KG L 
Sbjct: 301 AHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALS 360

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +    L   L  ++G +    I + I+  +Y K     +A+ ++N M Q+ +  D+V + 
Sbjct: 361 EMHDLLN--LMVENGLSPDHHIFN-IIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFG 417

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+  C  G +  A   F QM+  G  P++  +N+L+  LC   K ++A  FY  +   
Sbjct: 418 ALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ 477

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ PD + + TI+  LC  G ++KA+  +  M      P+   +  +I G+   G +  A
Sbjct: 478 GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEA 537

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
               D+MLS G+  + +T+N L+    R G I DA+ + +EML +GI P V TY+ ++  
Sbjct: 538 AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHG 597

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
                    A +LY  M+  G   +I  Y  ++ G      + EA ++F  + +    ++
Sbjct: 598 LFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657

Query: 541 HIPFRIL 547
              F I+
Sbjct: 658 ITTFNIM 664



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 203/410 (49%), Gaps = 6/410 (1%)

Query: 140 LRRKMIQKGTV---PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           L  +MI++ T+   PD+ T++ L+   C++G LE        + +     N    N  + 
Sbjct: 78  LFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLK 137

Query: 197 GYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
           G C    L +A+  L   M   G  P+ V++N L+   C +    +A++ L  ++AD  G
Sbjct: 138 GLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELL-HMMADSQG 196

Query: 256 KA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           ++   +V++   +++ +F  G   +A  L+ +M  + IQ ++V Y  +I+G C    +  
Sbjct: 197 RSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDR 256

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A   F QM+ +G  PD  TYN L++     GK  E       +S  G+ PD  +Y +++ 
Sbjct: 257 AEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLN 316

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
            LC +G   +AR F  SM+ K + P   I+ ++I GY   G LS    + +LM+  G+S 
Sbjct: 317 YLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSP 376

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +   FN +  A  +   I +A  +  +M   G+ PDV  +  LI A C LG +  A+  +
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKF 436

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           ++M+  G+ P+I  +  L+ G C     ++A+E + ++   G+  D + F
Sbjct: 437 NQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 224/502 (44%), Gaps = 45/502 (8%)

Query: 111 RCTLET--DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
            CT++   D   +  +I   C  G++         +++ G   + +  N L+  LC    
Sbjct: 85  ECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKR 144

Query: 169 LEKA-DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR---PNRV 224
           L +A D +I+ M E+  +P+  +YN  + G+C     ++AL L   MA++  R   PN V
Sbjct: 145 LREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVV 204

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           ++  +++    +G +  A     E++   D     +V+T T ++D   K     +A  ++
Sbjct: 205 SYATVINGFFTEGQVDKAYNLFLEMM---DRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
             M  K ++ D   YN LI+G+   G          +M   G  PD  TY +LLN LC  
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
           G+  EA  F+  + + G+ P+   Y  +I G    G + +  + L  M+E  + P+ HI+
Sbjct: 322 GRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           N+I   Y +   +  A  I + M   G+S +V  F ALI A  + G + DA     +M+ 
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI---------------------- 502
           +G+ P++F +N L+   C +     A + Y EML +GI                      
Sbjct: 442 EGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMK 501

Query: 503 -------------TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
                         PD+I+YT LI GHC  G + EA +    + ++GL  D   +  L  
Sbjct: 502 AQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLH 561

Query: 550 RYRRMKESDKARDIHQKWLLRN 571
            Y R    D A  + ++ +LRN
Sbjct: 562 GYCRAGRIDDAYGVFRE-MLRN 582



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 198/429 (46%), Gaps = 3/429 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++ G  PD    N +     K   +++A H+  +M +   SP+   + A I   C++  
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGR 428

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A+  F+ M N G+ PN    N LV+ LC       A +F  E+L  + G     V  
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEML--NQGIRPDVVFF 486

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           +TIL +   K G   +A  L + M +   + D+++Y  LI G CL G I  A      ML
Sbjct: 487 NTILCNLCTK-GQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVML 545

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  PD  TYNTLL+  C+ G++D+A   +  + + G+ P  ++Y TI+ GL       
Sbjct: 546 SVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFS 605

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A+E  L+M+         I+N+I++G  +   +  AF +   + S      + TFN +I
Sbjct: 606 EAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMI 665

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            A  + G   DA  L   +   G+ PDVFTY L+       G++     L+  M + G T
Sbjct: 666 GALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTT 725

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P+      L++    RG++  A    +K+     +++     +L     R +    A  +
Sbjct: 726 PNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785

Query: 564 HQKWLLRNK 572
            +K+ + N+
Sbjct: 786 PEKYRVLNE 794



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 121/303 (39%), Gaps = 38/303 (12%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R     D   +  +I   CL G+I  A      M+  G  PD  T+N L++  C+ G ++
Sbjct: 511 RVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRID 570

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A  V REM     +P   TY+  + G        +A  L+  M  +G + N   +NI++
Sbjct: 571 DAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIIL 630

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           + L K   + +A K                                 FQ+L        K
Sbjct: 631 NGLSKNNCVDEAFKL--------------------------------FQSLC------SK 652

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
           + Q +I  +N++I     +G    A   F  +   G +PDV TY  +   L ++G L+E 
Sbjct: 653 DFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEF 712

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              +  + K+G  P+      +++ L   GDI +A  +L  + EK+   E     ++I  
Sbjct: 713 DDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISL 772

Query: 411 YGR 413
             R
Sbjct: 773 LSR 775



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 7/239 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  ++   C  G+I  A  + R+M++ G  P V+T++ +++ L       +A 
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAK 608

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M       N   YN  + G  + N +D+A  LF ++ +   +    T NI++ AL
Sbjct: 609 ELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGAL 668

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K G   DA+     +          DV T  ++ ++  + G   +   L++ M +    
Sbjct: 669 FKSGRNEDAMHLFATI---SSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTT 725

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
            +    N L+      GDI+ A AY  ++ ++ F  +  T   L++ L +    DE  H
Sbjct: 726 PNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSR----DEYHH 780


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 201/457 (43%), Gaps = 46/457 (10%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKG--TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +R L   G+I  AL L   M   G    P V+  N L+  LC  G +  A+ V    + +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVF---AAL 213

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
            PS    TYN  + GYCR   ++ A  L + M      P+  T N L+ ALC +G + DA
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDA 270

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    ++L       +  V+T +IL+D+  K     QA+AL ++M  K  + DIV YNVL
Sbjct: 271 LAVFDDML---HRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVL 327

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITY---------------------------- 334
           IN  C  GD+  A      +   G  PD +TY                            
Sbjct: 328 INAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387

Query: 335 -------NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
                  NT++  LC+QG +D A      +S+ G   D ++Y +I+ GLC  G +  A E
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L  +      P+   +  ++ G         A  +   ML      +  TFN ++ +  
Sbjct: 448 LLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLC 507

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G +  A  + ++M  +G  PD+ TYN +I   CN   I  A++L  ++   G  PDI+
Sbjct: 508 QKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIV 567

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           T+  L+KG C     ++AE++ A +       D + F
Sbjct: 568 TFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTF 604



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 200/433 (46%), Gaps = 5/433 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   +  V++ LC   +      L  +M      PD +T N +V  LC+ G +++A  
Sbjct: 353 KPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIE 412

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+  MSE     +  TY++ + G C V  +D A+ L S + + G +P+ + +  ++  LC
Sbjct: 413 VVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLC 472

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
                  A + + E+L  D      D +T   ++ S  + G   +A+ +   M +     
Sbjct: 473 STEQWERAEELMAEMLCSD---CPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSP 529

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           DIV YN +I+G C    I  A      +   G  PD++T+NTLL  LC   + ++A    
Sbjct: 530 DIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLM 589

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + ++   PD++++ T+I  LC  G + +A E L  M E   VP    +++++D   + 
Sbjct: 590 ANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKA 649

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G    A  +   M +   + ++ T+N +I   T+ G + +A  L + M+ +G+ PD  TY
Sbjct: 650 GKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTY 707

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
             L    C       A+++   +   G++PD   Y +++ G C       A + FA + +
Sbjct: 708 RSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVS 767

Query: 535 LGLAIDHIPFRIL 547
            G   D   + IL
Sbjct: 768 SGCMPDESTYVIL 780



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 198/424 (46%), Gaps = 5/424 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L  +M  KG  PD++T+N L+N +C  GD+++A +++  +      P+  TY   + 
Sbjct: 305 AMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLK 364

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
             C      +   L + M +N   P+ VT N +V +LC++GL+  A++ +  +    +  
Sbjct: 365 SLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHM---SEHG 421

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
             +D++T + ++D     G    A+ L + +     + D +AY  ++ G C       A 
Sbjct: 422 CVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAE 481

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +ML     PD +T+NT++  LC++G +D A      +S+ G +PD ++Y  II GL
Sbjct: 482 ELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGL 541

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C    I  A E L  +      P+   +N ++ G        +A  +   M+      + 
Sbjct: 542 CNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDE 601

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            TFN +I +  + G +  A    K M  +G  P+  TY++++ A    G    AL+L   
Sbjct: 602 LTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSG 661

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M     TPD+ITY  +I      G M+EA ++   + + GL  D   +R L     R   
Sbjct: 662 MTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDG 719

Query: 557 SDKA 560
           +D+A
Sbjct: 720 TDRA 723



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 186/406 (45%), Gaps = 6/406 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C  G+I  A   RR +      PD  T N L+  LC  G +  A  V  +M    
Sbjct: 225 MVNGYCRAGRIEDA---RRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRG 281

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP+  TY+  +   C+ +   +A+ L   M   G  P+ VT+N+L++A+C +G + +A+
Sbjct: 282 CSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEAL 341

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L  + +        D +T T ++ S   +    +   L  +M   N   D V +N ++
Sbjct: 342 NILSNLPSH---GCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIV 398

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
              C  G +  A      M + G + D++TY+++L+ LC  G++D+A      L   G  
Sbjct: 399 TSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCK 458

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD I+Y T+++GLC      +A E +  ML     P+   +N ++    + G +  A  +
Sbjct: 459 PDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRV 518

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   G S ++ T+N +I        I DA  L  ++   G  PD+ T+N L+   C 
Sbjct: 519 VEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCG 578

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +     A QL   M+R    PD +T+  +I   C +G + +A E  
Sbjct: 579 VDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETL 624



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 208/468 (44%), Gaps = 10/468 (2%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           ++ +  L  MR  G      E D   +  +I  +C  G +  AL +   +   G  PD +
Sbjct: 303 RQAMALLDEMRAKG-----CEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAV 357

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  ++  LC     ++ + ++ EM+    +P+  T+N  +T  C+   +D+A+ +   M
Sbjct: 358 TYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHM 417

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
           + +G   + VT++ ++  LC  G + DAV+ L  +          D I  T ++      
Sbjct: 418 SEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRL---KSYGCKPDTIAYTTVLKGLCST 474

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
               +A  L  +M   +   D V +N ++   C  G +  A     QM + G  PD++TY
Sbjct: 475 EQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTY 534

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N +++ LC +  +D+A      L   G  PD +++ T+++GLC       A + + +M+ 
Sbjct: 535 NCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMR 594

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
            +  P+   +N +I    + G L+ A     +M   G   N  T++ ++ A  + G    
Sbjct: 595 SNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQA 654

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L   M  +G  PD+ TYN +I      G +  AL L   M+  G+ PD  TY  L  
Sbjct: 655 ALELLSGM-TNGT-PDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAY 712

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
           G C       A  +  ++Q  GL+ D   +  +   + R + +D A D
Sbjct: 713 GVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAID 760



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/421 (22%), Positives = 181/421 (42%), Gaps = 40/421 (9%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + +++  LC  G++  A+ L  ++   G  PD + +  ++  LC     E+A+ ++
Sbjct: 425 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELM 484

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P+  T+N  +   C+   +D+A+ +   M+ NG  P+ VT+N ++  LC +
Sbjct: 485 AEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNE 544

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             + DA++ L                                      +D+     + DI
Sbjct: 545 SCIDDAMELL--------------------------------------SDLQSCGCKPDI 566

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V +N L+ G C       A      M++    PD +T+NT++  LC++G L +A     +
Sbjct: 567 VTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKI 626

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +++ G  P+  +Y  ++  L   G    A E L  M   +  P+   +N +I    + G 
Sbjct: 627 MAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGT--PDLITYNTVISNLTKAGK 684

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A  +  +M+S G+  +  T+ +L     R      A  + + +   G+ PD   YN 
Sbjct: 685 MEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYND 744

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           ++   C      LA+  +  M+  G  PD  TY  L++     G + EA+ + A + +LG
Sbjct: 745 VLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLG 804

Query: 537 L 537
           +
Sbjct: 805 V 805



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 158/368 (42%), Gaps = 46/368 (12%)

Query: 203 ELDKALHLFSTMANNGIR--PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
           E+D+AL LF +MA+ G R  P  V  NIL+  LC  G + DA +                
Sbjct: 165 EIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERV--------------- 209

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
                            F AL              +V YN ++NG+C  G I  A     
Sbjct: 210 -----------------FAALG---------PSATVVTYNTMVNGYCRAGRIEDARRLIN 243

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            M    F PD  T+N L+  LC +G++ +A   +  +   G +P  ++Y  ++   C   
Sbjct: 244 GM---PFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKES 300

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
              +A   L  M  K   P+   +NV+I+     GD+  A +I   + S G   +  T+ 
Sbjct: 301 GYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYT 360

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            ++ +        +   L  EM  +   PD  T+N ++ + C  G +  A+++ D M   
Sbjct: 361 PVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEH 420

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G   DI+TY+ ++ G C  G + +A E+ +++++ G   D I +  + K     ++ ++A
Sbjct: 421 GCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERA 480

Query: 561 RDIHQKWL 568
            ++  + L
Sbjct: 481 EELMAEML 488



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 163/354 (46%), Gaps = 5/354 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   +  V++ LC   +   A  L  +M+     PD +T N +V  LC+ G +++A  
Sbjct: 458 KPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIR 517

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V+ +MSE   SP+  TYN  I G C  + +D A+ L S + + G +P+ VT N L+  LC
Sbjct: 518 VVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLC 577

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
                 DA + +  ++  +      D +T   ++ S  + G   QA+     M +     
Sbjct: 578 GVDRWEDAEQLMANMMRSN---CPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVP 634

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           +   Y+++++     G   +A      M      PD+ITYNT+++ L K GK++EA    
Sbjct: 635 NSSTYSIVVDALLKAGKAQAALELLSGMTN--GTPDLITYNTVISNLTKAGKMEEALDLL 692

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
            V+   G+ PD  +Y+++  G+C      +A   L  + +  + P+   +N ++ G+ R 
Sbjct: 693 RVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRD 752

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
                A      M+S G   +  T+  L+ A   GG + +A  L   +   G+ 
Sbjct: 753 RRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVL 806



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 5/251 (1%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           C  + D      +++ LC   +   A  L   M++    PD LT N ++  LC+ G L +
Sbjct: 560 CGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQ 619

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A   ++ M+E    PN +TY+  +    +  +   AL L S M N    P+ +T+N ++ 
Sbjct: 620 AIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVIS 677

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            L K G + +A+  L  ++++       D  T   L     +     +A+ +   +    
Sbjct: 678 NLTKAGKMEEALDLLRVMVSN---GLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTG 734

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           +  D   YN ++ GFC +     A   F  M+  G +PD  TY  LL  L   G LDEA 
Sbjct: 735 LSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAK 794

Query: 352 HFYGVLSKTGV 362
                L   GV
Sbjct: 795 RLLASLCSLGV 805


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 210/443 (47%), Gaps = 34/443 (7%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C+  K+  A+ L  KM      PD +++N +++ LCK G L +A  ++ +M      PN 
Sbjct: 59  CIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNR 118

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            T+N  ++GYC++  L +A  +   MA N + P+  T+  L+  LCK G + +A +   E
Sbjct: 119 NTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDE 178

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +   ++ K    V+T  +L++  F+     +   L ++M  K ++ + V YNV++  +  
Sbjct: 179 M---ENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVK 235

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G + +A     +M + GF PD +T+NTL N  CK G+L EA      +S+ G+  + ++
Sbjct: 236 EGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVT 295

Query: 369 YKTIIQGLCIHGDIVKAREFLLS-------------------------------MLEKSV 397
             TI+  LC    +  A + L S                               M EK +
Sbjct: 296 LNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEI 355

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           +P    +  +I G  R G    +    + +L  G+  +  T+N +IL   R G +  AF 
Sbjct: 356 IPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFH 415

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
            + +M+     PD+FT N+L+   C  G +  AL+L+   + +G   D +T+  +I G C
Sbjct: 416 FRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLC 475

Query: 518 ARGNMKEAEEVFAKIQTLGLAID 540
             G  +EA ++ A+++   L  D
Sbjct: 476 EEGRFEEAFDLLAEMEEKKLGPD 498



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 193/461 (41%), Gaps = 65/461 (14%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQ------------------------------ 146
           D R +  +I  LC  GKI  A  LR +M                                
Sbjct: 152 DVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELI 211

Query: 147 -----KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
                KG  P+ +T+N +V    K G ++ A + +R+M E   SP+C T+N    GYC+ 
Sbjct: 212 DEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKA 271

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
             L +A  +   M+  G++ N VT N ++H LC +  L DA K L    A   G    +V
Sbjct: 272 GRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSS--ASKRGYFVDEV 329

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
              T++M  YFK G        W++M +K I   I+ Y  +I G C +G    +     +
Sbjct: 330 SYGTLIM-GYFKVGKS----XXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNE 384

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           +L+ G +PD  TYNT++   C++G++D+A HF   + K    PD  +   +++GLC  G 
Sbjct: 385 LLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGM 444

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + KA +   + + K    +   +N II G    G    AF +   M    +  + +T NA
Sbjct: 445 LDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNA 504

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIF-----------------------PDVFTYNLLI 478
           ++ A    G + +A      ++  G                         P+   ++  I
Sbjct: 505 ILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQI 564

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
              C  G    A+ +  E  ++GI     TY  L++G   R
Sbjct: 565 NELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIKR 605



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 163/353 (46%), Gaps = 4/353 (1%)

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST--ILMDSYFKNGD 276
           ++PN +T N L+ AL +         +L + +  D  K   +V T+T  IL+        
Sbjct: 6   LKPNLLTLNTLIKALVR--YPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENK 63

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A+ L   M   +   D V+YN +++  C  G ++ A      M   G  P+  T+N 
Sbjct: 64  LSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNI 123

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L++  CK G L EA+    ++++  V PD  +Y T+I GLC  G I +A      M    
Sbjct: 124 LVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLK 183

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           ++P    +N++I+G   C      F + D M   GV  N  T+N ++    + G + +A 
Sbjct: 184 LLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAG 243

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
           +  ++M   G  PD  T+N L    C  G +  A ++ DEM R+G+  + +T   ++   
Sbjct: 244 NELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTL 303

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
           C    + +A ++ +     G  +D + +  L   Y ++ +S    ++ +K ++
Sbjct: 304 CGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEII 356



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 174/429 (40%), Gaps = 41/429 (9%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNE-----LDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           M  +   PN  T N  I    R        L KA+  FS +   G+  N  T NIL+   
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAI--FSDVIKLGVEVNTNTFNILICGC 58

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C +  L +A+  +G++          D ++   ++D   K G   +A  L  DM    + 
Sbjct: 59  CIENKLSEAIGLIGKM---KHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLF 115

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +   +N+L++G+C  G +  A      M +   LPDV TY TL+  LCK GK+DEA   
Sbjct: 116 PNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRL 175

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +    + P  ++Y  +I G       +K  E +  M  K V P    +NV++  Y +
Sbjct: 176 RDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVK 235

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G + NA +    M   G S +  TFN L     + G + +AF +  EM   G+  +  T
Sbjct: 236 EGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVT 295

Query: 474 YNLLIGASCNLGHIHLALQL-------------------------------YDEMLRRGI 502
            N ++   C    +  A +L                               +DEM  + I
Sbjct: 296 LNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEI 355

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            P IITY  +I G C  G   ++ +   ++   GL  D   +  +   Y R  + DKA  
Sbjct: 356 IPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFH 415

Query: 563 IHQKWLLRN 571
              K + ++
Sbjct: 416 FRNKMVKKS 424



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 20/249 (8%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           +++D+   + ++G V      D   +  +I   C  G++  A   R KM++K   PD+ T
Sbjct: 377 QSIDKCNELLESGLV-----PDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFT 431

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
            N LV  LC  G L+KA  + +       + +  T+N  I+G C     ++A  L + M 
Sbjct: 432 CNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEME 491

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
              + P+  THN ++ AL   G + +A +F+  ++  + GK     I+          N 
Sbjct: 492 EKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIV--EQGKLQDQTISL---------NK 540

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
            K ++ +  +     N     VA++  IN  C  G    A     +  ++G +    TY 
Sbjct: 541 RKTESSSETSQESDPN----SVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYI 596

Query: 336 TLLNCLCKQ 344
           +L+  L K+
Sbjct: 597 SLMEGLIKR 605


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/493 (28%), Positives = 214/493 (43%), Gaps = 50/493 (10%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI  LC   K+  A  L ++M   G  PDV T+  L++  CK G +E+A  + 
Sbjct: 287 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 346

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM  +  SP   TY A I  Y +  ++ +A  +F  M + G RPN VT+  LV  LCK 
Sbjct: 347 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 406

Query: 237 GLLGDAVKFLGEVLADDDGKATSD--------------VITSTILMDSYFKNGDKFQALA 282
           G +  A +   +++   D  A SD              V+T   L+D   K      A  
Sbjct: 407 GNISKAFEVYAKLIGTSD-SADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           L + M     + + + Y+ LI+GFC  G I SA   F QM K G+LP V TY +L++ + 
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K G+LD A      + K    P+ ++Y  +I GLC  G+  KA + L  M EK   P   
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 585

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI---------------LAET 447
            +  +IDG G+ G +  +  +   M   G S N  T+  LI               L E 
Sbjct: 586 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645

Query: 448 R------------------GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
           +                    S   +  + +EM   G  P    Y +LI      G + +
Sbjct: 646 KQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEI 705

Query: 490 ALQLYDEMLR--RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           A++L+ EM+     +  D   Y  LI+  C    ++EA  +++++   G   +   F  L
Sbjct: 706 AMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCL 765

Query: 548 KKRYRRMKESDKA 560
            K    +K+ D+A
Sbjct: 766 IKGLVEVKKWDEA 778



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 184/387 (47%), Gaps = 19/387 (4%)

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           LC +G  +KA  +I+EM      P+ +TY+  IT  C   +++KA  LF  M   G+ P+
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
             T+ IL+ + CK GL+  A     E+ +      +  V+T T L+ +Y K     QA  
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVG---CSPTVVTYTALIHAYLKAKQVPQAND 379

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML----------------KRG 326
           +++ M     + + V Y  L++G C  G+IS AF  + +++                +  
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 439

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+V+TY  L++ LCK  K+D A      +  +G  P+ I Y  +I G C  G I  A+
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E  L M +   +P  H +  +ID   + G L  A  +   ML    + NV T+ A+I   
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 559

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            R G    A  L   M   G  P+V TY  LI      G I L+L L+ +M R+G +P+ 
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 619

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +TY  LI   CA G + +A  +  +++
Sbjct: 620 VTYRVLINHLCAAGLLDKARLLLGEMK 646



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 201/467 (43%), Gaps = 37/467 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK------ADHVI 176
           +++   C       A  L  +M   G  P  + +N  +  +C    L        A+ + 
Sbjct: 182 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIY 241

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC-- 234
            EM       N      F    C V + DKA  L   M   G  P+  T++ ++  LC  
Sbjct: 242 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 301

Query: 235 ----KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
               K  LL   +K +G          T DV T TIL+DS+ K G   QA  L+ +M   
Sbjct: 302 TKVEKAFLLFQEMKMVG---------VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
                +V Y  LI+ +     +  A   F +M+  G  P+ +TY  L++ LCK G + +A
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412

Query: 351 SHFYGVLSKTG----------------VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
              Y  L  T                 +AP+ ++Y  ++ GLC    +  A E L +ML 
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
               P   +++ +IDG+ + G + +A  +   M   G   +V T+ +LI    + G +  
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 532

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  +  +ML D   P+V TY  +I   C +G    AL+L   M  +G +P+++TYT LI 
Sbjct: 533 AMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID 592

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
           G    G +  + ++F ++   G + +++ +R+L          DKAR
Sbjct: 593 GLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 639



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 180/400 (45%), Gaps = 27/400 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMI----------------QKGTVPDVLTHNYLVNELCKI 166
           A++  LC  G I  A  +  K+I                +    P+V+T+  LV+ LCK 
Sbjct: 398 ALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKA 457

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
             ++ A  ++  M      PN   Y+A I G+C+  ++D A  +F  M   G  P+  T+
Sbjct: 458 HKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTY 517

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
             L+  + K G L  A+K L ++L D     T +V+T T ++D   + G+  +AL L + 
Sbjct: 518 TSLIDRMFKDGRLDLAMKVLSQMLKDS---CTPNVVTYTAMIDGLCRIGESEKALKLLSL 574

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +K    ++V Y  LI+G    G I  +   F QM ++G  P+ +TY  L+N LC  G 
Sbjct: 575 MEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGL 634

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           LD+A    G + +T        Y+  IQG       + +   L  M     VP   ++ +
Sbjct: 635 LDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGM 692

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT----FNALILAETRGGSIFDAFSLKKEM 462
           +ID + + G L  A  +   M+   V S+V T    + +LI A      + +AF L  EM
Sbjct: 693 LIDCFSKAGRLEIAMELHKEMME--VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEM 750

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
              G  P++  +  LI     +     ALQL   +   G+
Sbjct: 751 TRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/514 (23%), Positives = 217/514 (42%), Gaps = 70/514 (13%)

Query: 88  NALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           +ALD+I +E+  +L T+  T  +   +E  Y                  A+    +M   
Sbjct: 93  DALDMIEREDF-KLDTVLCTHMISGLMEASY---------------FDEAMSFLHRMRCN 136

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
             +P+V+T+  L++   K   L     +I  M     +PN + +N+ +  YC   +   A
Sbjct: 137 SCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYA 196

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKK------GLLGDAVKFLGEVLA---------- 251
             L + M   G  P  V +NI + ++C +       LL  A K  GE+LA          
Sbjct: 197 YKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNV 256

Query: 252 -------------DDDGKATSDVITSTILMD--------SYFKNGDKFQ-ALALWNDMFQ 289
                        D   +   +++    + D        ++  +  K + A  L+ +M  
Sbjct: 257 ANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 316

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             +  D+  Y +LI+ FC  G I  A   F +M   G  P V+TY  L++   K  ++ +
Sbjct: 317 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQ 376

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS------------- 396
           A+  +  +   G  P+ ++Y  ++ GLC  G+I KA E    ++  S             
Sbjct: 377 ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCED 436

Query: 397 ---VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
              + P    +  ++DG  +   + +A  + D MLS G   N   ++ALI    + G I 
Sbjct: 437 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 496

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A  +  +M   G  P V TY  LI      G + LA+++  +ML+   TP+++TYT +I
Sbjct: 497 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 556

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G C  G  ++A ++ + ++  G + + + +  L
Sbjct: 557 DGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 590



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/464 (23%), Positives = 190/464 (40%), Gaps = 30/464 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHVIREMSE 181
           A+++ L   G++     ++++M + G   D  T     + LCK G    A D + RE  +
Sbjct: 45  ALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFK 104

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
           +    +       I+G    +  D+A+     M  N   PN VT+  L+    KK  LG 
Sbjct: 105 L----DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGW 160

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
             + +  ++ +      S +  S  L+ SY    D   A  L N M         V YN+
Sbjct: 161 CKRIINMMMTEGCNPNPS-LFNS--LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 217

Query: 302 LINGFCLNGDISS------AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
            I   C    + S      A   + +ML    + + +       CLC  GK D+A     
Sbjct: 218 FIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIK 277

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + + G  PD  +Y  +I  LC    + KA      M    V P+ + + ++ID + + G
Sbjct: 278 EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG 337

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            +  A  + + M S G S  V T+ ALI A  +   +  A  +   M+  G  P+  TY 
Sbjct: 338 LIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYG 397

Query: 476 LLIGASCNLGHIHLALQLYDEML----------------RRGITPDIITYTELIKGHCAR 519
            L+   C  G+I  A ++Y +++                R  + P+++TY  L+ G C  
Sbjct: 398 ALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKA 457

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
             +  A E+   + + G   +HI +  L   + +  + D A+++
Sbjct: 458 HKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 173/395 (43%), Gaps = 24/395 (6%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  TYNA +       ++D    +   M+ +G   +R T     HALCK+G   DA+  
Sbjct: 38  PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADAL-- 95

Query: 246 LGEVLADDDGKATSDVITSTI--LMD-SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
             +++  +D K  + + T  I  LM+ SYF      +A++  + M   +   ++V Y  L
Sbjct: 96  --DMIEREDFKLDTVLCTHMISGLMEASYFD-----EAMSFLHRMRCNSCIPNVVTYRTL 148

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++GF     +         M+  G  P+   +N+L++  C +     A      ++  G 
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID-----GYGRC--- 414
            P  + Y   I  +C  G        LL + EK +  E    N +++      + RC   
Sbjct: 209 PPGYVVYNIFIGSIC--GQEKLPSPDLLDLAEK-IYGEMLAANCVLNKVNVANFARCLCG 265

Query: 415 -GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G    AF +   M+  G   +  T++ +I        +  AF L +EM + G+ PDV+T
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 325

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y +LI + C  G I  A  L++EM   G +P ++TYT LI  +     + +A ++F ++ 
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 385

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             G   + + +  L     +     KA +++ K +
Sbjct: 386 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 420



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 132/279 (47%), Gaps = 33/279 (11%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           +C        + ++I  +   G++  A+ +  +M++    P+V+T+  +++ LC+IG+ E
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           KA  ++  M E   SPN  TY A I G  +  ++D +L LF+ M+  G  PN VT+ +L+
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626

Query: 231 HALCKKGLLGDAVKFLGE-----------------------------VLADDDGKATSDV 261
           + LC  GLL  A   LGE                             +L + +   T  +
Sbjct: 627 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPI 686

Query: 262 I-TSTILMDSYFKNGDKFQALALWNDMFQ--KNIQTDIVAYNVLINGFCLNGDISSAFAY 318
                +L+D + K G    A+ L  +M +   +++TD   Y  LI   CL   +  AF  
Sbjct: 687 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 746

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF-YGV 356
           + +M +RGF+P++  +  L+  L +  K DEA    YG+
Sbjct: 747 YSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGI 785



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 144/335 (42%), Gaps = 38/335 (11%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R TL  +   + A++  LC   K+  A  L   M+  G  P+ + ++ L++  CK G ++
Sbjct: 437 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 496

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A  V  +M++    P+  TY + I    +   LD A+ + S M  +   PN VT+  ++
Sbjct: 497 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 556

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LC+ G    A+K L   L ++ G  + +V+T T L+D   K G    +L L+  M +K
Sbjct: 557 DGLCRIGESEKALKLLS--LMEEKG-CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 613

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAF----------------AYFC-------------- 320
               + V Y VLIN  C  G +  A                  Y C              
Sbjct: 614 GCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLG 673

Query: 321 ---QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK--TGVAPDQISYKTIIQG 375
              +M   G +P    Y  L++C  K G+L+ A   +  + +  + V  D   Y ++IQ 
Sbjct: 674 ILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQA 733

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
           LC+   + +A      M  +  VPE  ++  +I G
Sbjct: 734 LCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKG 768



 Score = 38.9 bits (89), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 3/133 (2%)

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D +  FG   +  T+NAL+   +  G +   F ++KEM   G   D FT      A C 
Sbjct: 28  EDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCK 87

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G    AL   D + R     D +  T +I G        EA     +++      + + 
Sbjct: 88  EGRWADAL---DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144

Query: 544 FRILKKRYRRMKE 556
           +R L   + + K+
Sbjct: 145 YRTLLSGFLKKKQ 157


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 207/402 (51%), Gaps = 3/402 (0%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T + L ++M   G   DVL+   L+N  C++  ++    V+ ++ ++   PN  T++  I
Sbjct: 109 TVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLI 168

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G+C   ++ +A+ LF  M   G +PN  +++I++  LC+ G   + +K L  +      
Sbjct: 169 NGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVG-- 226

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               DV+    ++D   K+    +A+ ++  M    I   +V Y  LI+G    G    A
Sbjct: 227 -CEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEA 285

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           F    +M     +PD++ ++ L++ +CK+G++ EA      +++ GV PD  +Y T++ G
Sbjct: 286 FGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNG 345

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C+  ++V+AR+    M+ K  +P+   ++++++GY +   +  A  + D M   G+  +
Sbjct: 346 YCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPD 405

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             ++N LI    +     +A  L K+M  +G  P++ TY++L+      G++  A+ L+ 
Sbjct: 406 TVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFR 465

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            M   G+ PD++TY  +I G C  G  K+A E+FA++   GL
Sbjct: 466 AMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGL 507



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 194/395 (49%), Gaps = 3/395 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++  LE +      +I   C+ GKIG A+ L   M+ +G  P+V +++ ++  LC++G  
Sbjct: 153 IKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKT 212

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +   ++  M  +   P+   YN  +   C+   +++A+H+F  M   GI P  VT+  L
Sbjct: 213 TEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSL 272

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +H L   G   +A   L E+     G    D++  ++L+D   K G+  +A  +   M +
Sbjct: 273 IHGLRNLGRWKEAFGLLNEM---KGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTE 329

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             ++ D+  YN L+NG+CL  ++  A   F  M+ +G +PDV +++ L+N  CK  ++DE
Sbjct: 330 MGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDE 389

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   +  ++  G+ PD +SY T+I GLC     ++A E    M      P    +++++D
Sbjct: 390 AKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLD 449

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
              + G L  A  +   M + G+  ++ T+N +I    + G   DA  L  E+ + G+ P
Sbjct: 450 CLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQP 509

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           + +     I   C  G +  A + + +M +   +P
Sbjct: 510 NNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 190/391 (48%), Gaps = 3/391 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           K+I+ G  P+V+T + L+N  C  G + +A  +   M      PN  +Y+  I G CRV 
Sbjct: 151 KIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVG 210

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +  + + L   M   G  P+ V +N +V  LCK  L+ +AV    ++           V+
Sbjct: 211 KTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTG---ILPTVV 267

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T T L+      G   +A  L N+M   NI  D+VA++VLI+  C  G++S A      M
Sbjct: 268 TYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM 327

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            + G  PDV TYNTL+N  C + ++ EA   + V+   G  PD  S+  ++ G C    I
Sbjct: 328 TEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRI 387

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A++    M  + ++P+   +N +I G  +      A  +   M S G   N+ T++ L
Sbjct: 388 DEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSIL 447

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +   ++ G +  A  L + M   G+ PD+ TYN++I   C  G    A +L+ E+  +G+
Sbjct: 448 LDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGL 507

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            P+    T  I G C  G + EA + F +++
Sbjct: 508 QPNNWVCTPTIDGVCKGGLLDEAHKAFRQME 538



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 182/380 (47%), Gaps = 3/380 (0%)

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           ++  A      M    P P+   +    +   R+      + L   M   GI  + ++  
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           IL++  C+   +      LG+++         +VIT + L++ +   G   +A+ L++ M
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLG---LEPNVITFSTLINGFCIEGKIGRAIELFDVM 187

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
             +  + ++ +Y+++I G C  G  +        M   G  PDV+ YNT+++ LCK   +
Sbjct: 188 VARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLV 247

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           +EA H +  +  TG+ P  ++Y ++I GL   G   +A   L  M   +++P+   ++V+
Sbjct: 248 NEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVL 307

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           ID   + G++S A  I   M   GV  +V T+N L+        + +A  + + M+  G 
Sbjct: 308 IDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGR 367

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PDVF++++L+   C    I  A QL+DEM  RG+ PD ++Y  LI G C      EAEE
Sbjct: 368 MPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEE 427

Query: 528 VFAKIQTLGLAIDHIPFRIL 547
           +F  + + G   + + + IL
Sbjct: 428 LFKDMHSNGYPPNLVTYSIL 447



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 153/328 (46%), Gaps = 10/328 (3%)

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQAL----------ALWNDMFQKNIQTDIVAYNVL 302
           +D  +  + + +T  + S  K G+ F AL          +L   M    I  D+++  +L
Sbjct: 73  NDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTIL 132

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           IN FC    +   F+   +++K G  P+VIT++TL+N  C +GK+  A   + V+   G 
Sbjct: 133 INCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGY 192

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+  SY  II+GLC  G   +  + L  M      P+  I+N I+D   +   ++ A  
Sbjct: 193 KPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVH 252

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I   M   G+   V T+ +LI      G   +AF L  EM    I PD+  +++LI   C
Sbjct: 253 IFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMC 312

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +  A  +   M   G+ PD+ TY  L+ G+C R  + EA +VF  + + G   D  
Sbjct: 313 KEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVF 372

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLR 570
            F IL   Y + K  D+A+ +  +   R
Sbjct: 373 SFSILVNGYCKAKRIDEAKQLFDEMTHR 400



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 122/244 (50%), Gaps = 3/244 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  +C  G++  A  + + M + G  PDV T+N L+N  C   ++ +A  V   M   
Sbjct: 306 VLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISK 365

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  +++  + GYC+   +D+A  LF  M + G+ P+ V++N L+  LC+     +A
Sbjct: 366 GRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEA 425

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +   ++ ++       +++T +IL+D   K G   QA+ L+  M    ++ D+V YN++
Sbjct: 426 EELFKDMHSNG---YPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIM 482

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C  G    A   F ++  +G  P+       ++ +CK G LDEA   +  + K   
Sbjct: 483 IDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDC 542

Query: 363 APDQ 366
           +P Q
Sbjct: 543 SPAQ 546


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 234/495 (47%), Gaps = 37/495 (7%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V C    +     ++++  C+ G + +AL L  ++ + G VP+ +T++ L++  CK G++
Sbjct: 137 VNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNI 196

Query: 170 EKADHVIREMSE--MRPS--------------------------------PNCATYNAFI 195
           EKA     EM    +R S                                 N  T+N  +
Sbjct: 197 EKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLL 256

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
           +  C+  ++++A +L+  +   GI PN V++N ++   C+K  +  A K   E+L   D 
Sbjct: 257 SWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEML---DN 313

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
             T + +T TILMD YFK GD   A ++++ M   NI        ++I G C  G     
Sbjct: 314 GFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEG 373

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F + + +GF+P  + YNT+++   K+G ++ AS+ Y  + + G+ P  ++Y ++I G
Sbjct: 374 RDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDG 433

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C   +I  A + L  M  K +  +   +  +IDG+ +  D+ +A  + + +   G+S N
Sbjct: 434 FCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPN 493

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
            F +N++I       ++ +A  L K+M+ +GI  D+ TY  LI      G +  A  ++ 
Sbjct: 494 RFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHT 553

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
           EML +GI PD   +T LI G C +G  + A ++   +    +    + +  L   + +  
Sbjct: 554 EMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEG 613

Query: 556 ESDKARDIHQKWLLR 570
              +A  +H + L R
Sbjct: 614 NLQEAFRLHDEMLDR 628



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 220/458 (48%), Gaps = 10/458 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +   +  LCL    G AL L R+M   G +P   T   ++    K G++ +A 
Sbjct: 71  VELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEAL 130

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  +M     S N A   + + GYC    L  AL L + ++ +G+ PN+VT+++L+   
Sbjct: 131 RLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGC 190

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G +  A +F  E+         S V +   +++ Y K      A  ++ND  +  + 
Sbjct: 191 CKNGNIEKAFEFYSEMKTKG---IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL- 246

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++  +N L++  C  G ++ A   + +++ +G  P+V++YN ++   C++  ++ A   
Sbjct: 247 ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKV 306

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           Y  +   G  P+ +++  ++ G    GDI  A      M + +++P      +II G  +
Sbjct: 307 YKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCK 366

Query: 414 CGDLSNAFSIRDLMLSF---GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            G    +F  RDL   F   G       +N +I    + G+I  A ++ +EM   GI P 
Sbjct: 367 AG---RSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPS 423

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             TY  LI   C   +I LAL+L ++M R+G+  DI  Y  LI G C R +MK A E+  
Sbjct: 424 TVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLN 483

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +++  GL+ +   +  +   ++ M   ++A D+++K +
Sbjct: 484 ELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMV 521



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 175/383 (45%), Gaps = 32/383 (8%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  GK+  A  L  ++I KG  P+V+++N ++   C+  ++  A  V +EM +   +PN
Sbjct: 259 LCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPN 318

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             T+   + GY +  +++ A  +F  M +  I P   T  I++  LCK G   +      
Sbjct: 319 AVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFN 378

Query: 248 EVLADD------------DG--------------------KATSDVITSTILMDSYFKNG 275
           + ++              DG                      T   +T T L+D + K  
Sbjct: 379 KFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGN 438

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
           +   AL L NDM +K ++ DI AY  LI+GFC   D+ SA     ++   G  P+   YN
Sbjct: 439 NIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYN 498

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           +++        ++EA   Y  +   G+  D  +Y ++I GL   G ++ A +    ML K
Sbjct: 499 SMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSK 558

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
            ++P+     V+I+G    G   NA  I + M    +  +V  +N LI    + G++ +A
Sbjct: 559 GILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEA 618

Query: 456 FSLKKEMLLDGIFPDVFTYNLLI 478
           F L  EML  G+ PD  TY++L+
Sbjct: 619 FRLHDEMLDRGLVPDNITYDILV 641



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 185/385 (48%), Gaps = 39/385 (10%)

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           + P+    NIL+ A+ +K +  +A +   ++L       T D  T  +++ +  K G+  
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVG---VTGDCFTLHVMLRACLKEGNIL 57

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT-- 336
           +A   +     + ++ D  AY++ ++  CL  +   A +   +M   G++P   T+ +  
Sbjct: 58  EAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVI 117

Query: 337 ------------------LLNC---------------LCKQGKLDEASHFYGVLSKTGVA 363
                             ++NC                C QG L  A      +S++G+ 
Sbjct: 118 TACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLV 177

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P++++Y  +I G C +G+I KA EF   M  K +    +  N I++GY +C    NAF++
Sbjct: 178 PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTM 237

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            +  L  G+ +NVFTFN L+    + G + +A +L  E++  GI P+V +YN +I   C 
Sbjct: 238 FNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCR 296

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
             +I+ A ++Y EML  G TP+ +T+T L+ G+  +G+++ A  +F +++   +      
Sbjct: 297 KDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTT 356

Query: 544 FRILKKRYRRMKESDKARDIHQKWL 568
             I+ K   +   S + RD+  K++
Sbjct: 357 LGIIIKGLCKAGRSFEGRDLFNKFV 381



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 108/219 (49%), Gaps = 3/219 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I   C G  I  AL L   M +KG   D+  +  L++  CK  D++ A  ++ E+ 
Sbjct: 427 YTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELR 486

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               SPN   YN+ ITG+  +N +++A+ L+  M N GI  +  T+  L+  L K G L 
Sbjct: 487 GAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLL 546

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A     E+L+        D    T+L++     G    A  +  DM  KN+   ++ YN
Sbjct: 547 YASDIHTEMLSKG---ILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYN 603

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            LI G    G++  AF    +ML RG +PD ITY+ L+N
Sbjct: 604 TLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 642



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 5/139 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E +D  K M + G + C L+T    + ++I  L   G++  A  +  +M+ KG +PD 
Sbjct: 510 VEEAIDLYKKMVNEG-IPCDLKT----YTSLIDGLLKSGRLLYASDIHTEMLSKGILPDD 564

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
             H  L+N LC  G  E A  ++ +M+     P+   YN  I G+ +   L +A  L   
Sbjct: 565 RAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDE 624

Query: 214 MANNGIRPNRVTHNILVHA 232
           M + G+ P+ +T++ILV+ 
Sbjct: 625 MLDRGLVPDNITYDILVNG 643


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 206/429 (48%), Gaps = 4/429 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M  +  +P   T N + +   K G LE+   V + M E   +   + Y   I+  C+V  
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
            D+A  L  TM     +   + ++ +++ LCK   + +A     E++      A  D +T
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEA----RELIEKMARYAPPDALT 116

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              +++   K      ALA   +M  + I+ D   YN +++G C    +  A   F +M+
Sbjct: 117 YGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMV 176

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           K+   P+V+TYNTL+N LCK  +++ A   +  ++  G  P ++SY T+I G C   D+V
Sbjct: 177 KQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLV 236

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A++    M+  + VP    +  +IDG  + G +  A  + D M+  GV+ NV T++ LI
Sbjct: 237 AAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLI 296

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               +   + +A  L ++M+  GI P V TYN+L+ + C    +  A +L+  M +R   
Sbjct: 297 DGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCH 356

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P ++TY  L++  C    +  A  ++A++   G   D I +  L     R  +  +A+++
Sbjct: 357 PTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQEL 416

Query: 564 HQKWLLRNK 572
            +K  L  +
Sbjct: 417 MEKMKLTKR 425



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 196/410 (47%), Gaps = 39/410 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G    A  L   M  K      + ++ ++N LCK+  +E+A  +I +M+   
Sbjct: 51  LISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA 110

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P P+  TY   +   C+   +D AL     MA  GI+P+   +N ++  LC++    + V
Sbjct: 111 P-PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQE----EKV 165

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +                                  +A  L+  M ++ I  ++V YN LI
Sbjct: 166 E----------------------------------EARLLFEKMVKQRINPNVVTYNTLI 191

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C    I +A+  F +M  +G++P  ++YNTL++  CK+  L  A   +  + ++   
Sbjct: 192 NGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCV 251

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y T+I GL   G +  A E L  M++K V P    ++ +IDG+ +   +  A  +
Sbjct: 252 PNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKL 311

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M++ G++  V T+N L+ +  R   + DAF L + M      P V TYN L+ A C+
Sbjct: 312 LEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCH 371

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
              +  A +LY EM+ +G  PD ITY  L  G    G + EA+E+  K++
Sbjct: 372 HKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 3/167 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  L   GK+  A  +   M++KG  P+V T++ L++  CK+  +++A  ++ +M 
Sbjct: 257 YTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMV 316

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               +P   TYN  +   CR ++L+ A  LF  MA     P  VT+N L+ ALC    L 
Sbjct: 317 TQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLD 376

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            A +   E++A        D IT   L     + G   +A  L   M
Sbjct: 377 GAHRLYAEMIAKG---CPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 69/139 (49%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
           G V+  +  +   +  +I   C   ++  A  L  +M+ +G  P V+T+N L+N LC+  
Sbjct: 279 GMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRAD 338

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
            LE A  + R M++ R  P   TYN  +   C   +LD A  L++ M   G  P+ +T++
Sbjct: 339 KLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYD 398

Query: 228 ILVHALCKKGLLGDAVKFL 246
            L   L + G + +A + +
Sbjct: 399 TLAWGLTRAGKVHEAQELM 417


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 214/455 (47%), Gaps = 12/455 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA- 172
           ++ D   +   I   C  G           M++K T  D  T N LV   C+IG ++   
Sbjct: 74  IDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGE 133

Query: 173 ---DHVIREMSE----MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
              D++I +M++        PN  TY   I+ YC+ + L +AL L+  M ++G  P+ VT
Sbjct: 134 WVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVT 193

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
           ++ +++ LCK+G+L +A   L E+   D      + +   IL+DS FK G  +++    +
Sbjct: 194 YSSIINGLCKRGMLTEAKALLREM---DKMGVNPNHVVYAILVDSLFKAGSAWESFIYQS 250

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M    +  D+V    LI+G    G    A A FC + K   +P+ ITY  +++  CK G
Sbjct: 251 QMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLG 310

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
            +D A      + K  V P+ ++Y +II G    G +  A   +  ML+++++P  +I+ 
Sbjct: 311 DMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYA 370

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            +IDG+ + G    A  + + M   G+  N F  +A I    RG  + +A  L K M+  
Sbjct: 371 TLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSK 430

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G+  D   Y  L+      G    A  + ++M   GI  D++ Y  LI G    G   +A
Sbjct: 431 GLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKY-DA 489

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           E V++ I+ LGLA D   +  +   Y +  + + A
Sbjct: 490 ESVYSGIRELGLAPDRATYNTMINAYCKQGKLENA 524



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 217/485 (44%), Gaps = 39/485 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I   C  G +  A  L R M +K  VP+V+T++ ++N   K G L+ A  ++++M 
Sbjct: 299 YTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKML 358

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN   Y   I G+ +  + D A+ L++ M  NG+  N    +  ++ L K+G   
Sbjct: 359 DQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNL-KRGRKM 417

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +  + L + +         D +  T LMD +FK G +  A  +   M +  I+ D+VAYN
Sbjct: 418 EEAEGLCKYMMSKG--LLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYN 475

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           VLING    G   +   Y   + + G  PD  TYNT++N  CKQGKL+ A   +  +   
Sbjct: 476 VLINGLLRLGKYDAESVY-SGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGH 534

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            V P+ I+   ++ GL   G+  +A + L  ML   + P   I   +++   +C      
Sbjct: 535 SVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTI 594

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +   ++  G+ +N   +N+LI      G    A  +   M  +GI  D  TYN LI  
Sbjct: 595 LQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHG 654

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIIT-------------------------------- 508
                HI  AL  Y +ML  G++P I T                                
Sbjct: 655 HFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPD 714

Query: 509 ---YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
              Y  LI GH   GN KEA + + ++ T GL      + +L + + ++ + D+AR++  
Sbjct: 715 ASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLN 774

Query: 566 KWLLR 570
           +  +R
Sbjct: 775 EMQVR 779



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 202/468 (43%), Gaps = 52/468 (11%)

Query: 136 TALW-LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
           + +W L  +M+  G +P+V THN LV+  CK+G L  A  +IR +       +  TYN  
Sbjct: 28  SQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLIRNVD---IDVDTVTYNTA 84

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF-------LG 247
           I G+C+    ++     S M       +  T NILV   C+ G    +VK+       L 
Sbjct: 85  IWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIG----SVKYGEWVMDNLI 140

Query: 248 EVLADDDGKAT--SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           + + DDDG      +++T T L+ +Y K     +AL+L+ +M       D+V Y+ +ING
Sbjct: 141 DDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIING 200

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITY------------------------------- 334
            C  G ++ A A   +M K G  P+ + Y                               
Sbjct: 201 LCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFD 260

Query: 335 ----NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
                TL++ L K GK DEA   +  L+K    P+ I+Y  +I G C  GD+  A   L 
Sbjct: 261 LVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLR 320

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M +K VVP    ++ II+GY + G L  A  I   ML   +  N + +  LI    + G
Sbjct: 321 DMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAG 380

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
               A  L  EM L+G+  + F  +  I        +  A  L   M+ +G+  D + YT
Sbjct: 381 KQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYT 440

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
            L+ G    G    A  +  K+   G+  D + + +L     R+ + D
Sbjct: 441 SLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYD 488



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 195/420 (46%), Gaps = 17/420 (4%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
           VP +   N L+ +    G + +   +  EM      PN  T+N  +  +C++  L  AL 
Sbjct: 8   VPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALD 67

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L   + N  I  + VT+N  +   C++GL      FL  ++  D      D  T  IL+ 
Sbjct: 68  L---IRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKD---TFFDSFTCNILVK 121

Query: 270 SYFKNGD-KFQALALWN-------DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
            + + G  K+    + N       D    N++ ++V Y  LI+ +C    +S A + + +
Sbjct: 122 GFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEE 181

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M+  GFLPDV+TY++++N LCK+G L EA      + K GV P+ + Y  ++  L   G 
Sbjct: 182 MISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGS 241

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
             ++  +   M+   V  +  +   +IDG  + G    A ++   +       N  T+ A
Sbjct: 242 AWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTA 301

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I    + G +  A SL ++M    + P+V TY+ +I      G + +A+++  +ML + 
Sbjct: 302 MIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQN 361

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI---PFRILKKRYRRMKESD 558
           I P+   Y  LI GH   G    A +++ +++  GL  +      F    KR R+M+E++
Sbjct: 362 IMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAE 421



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 173/389 (44%), Gaps = 14/389 (3%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P    +N  I  +     + +   L+S M + G+ PN  THNILVHA CK G L  A+  
Sbjct: 9   PTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDL 68

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           +  V  D       D +T    +  + + G   Q     + M +K+   D    N+L+ G
Sbjct: 69  IRNVDID------VDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKG 122

Query: 306 FCLNGDISSAFAYFCQML--------KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
           FC  G +         ++             P+++TY TL++  CKQ  L EA   Y  +
Sbjct: 123 FCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEM 182

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
              G  PD ++Y +II GLC  G + +A+  L  M +  V P   ++ +++D   + G  
Sbjct: 183 ISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSA 242

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             +F  +  M+  GVS ++     LI    + G   +A ++   +      P+  TY  +
Sbjct: 243 WESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAM 302

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I   C LG +  A  L  +M ++ + P+++TY+ +I G+  +G +  A  +  K+    +
Sbjct: 303 IDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNI 362

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQK 566
             +   +  L   + +  + D A D++ +
Sbjct: 363 MPNAYIYATLIDGHLKAGKQDAAVDLYNE 391



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 188/415 (45%), Gaps = 16/415 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A I +L  G K+  A  L + M+ KG + D + +  L++   K G    A  +  +M+E 
Sbjct: 406 AFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAET 465

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +   YN  I G  R+ + D A  ++S +   G+ P+R T+N +++A CK+G L +A
Sbjct: 466 GIKFDVVAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENA 524

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K   E+          + IT  IL+    K G+  +A+ + N+M    I  ++  +  L
Sbjct: 525 IKLWNEMKGHS---VMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRAL 581

Query: 303 INGF--CLNGDISSAFAYFCQMLKR----GFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           +N    C   D         QM KR    G   +   YN+L+  LC  G    A+     
Sbjct: 582 LNACSKCERADT------ILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNN 635

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           ++K G++ D ++Y  +I G      I KA      ML + V P    +N+++ G    G 
Sbjct: 636 MTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGL 695

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +S A+ I   M   G+  +   +N LI    + G+  +A     EM+  G+ P   TYN+
Sbjct: 696 MSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNV 755

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
           LI     +G +  A +L +EM  R + P+  TY  LI G C      E + +  K
Sbjct: 756 LIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKK 810



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 15/252 (5%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ +   + ++I  LC  G    A  +   M ++G   D +T+N L++   K   +EKA 
Sbjct: 606 LKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKAL 665

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
               +M     SP   TYN  + G      + KA  + S M ++G+ P+   +N L+   
Sbjct: 666 ATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGH 725

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K G   +A+KF  E++       TS   T  +L++ + K G   QA  L N+M  + + 
Sbjct: 726 GKIGNKKEAIKFYCEMVTKGLVPKTS---TYNVLIEDFAKVGKMDQARELLNEMQVRRVP 782

Query: 294 TDIVAYNVLINGFC-LNGDI-----------SSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            +   Y++LI G+C L+              + A   F +M ++GF+P   T   + +  
Sbjct: 783 PNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVPCENTLACISSTF 842

Query: 342 CKQGKLDEASHF 353
            + G + +A H 
Sbjct: 843 ARPGMVVDAKHM 854


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/493 (28%), Positives = 214/493 (43%), Gaps = 50/493 (10%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI  LC   K+  A  L ++M   G  PDV T+  L++  CK G +E+A  + 
Sbjct: 222 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 281

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM  +  SP   TY A I  Y +  ++ +A  +F  M + G RPN VT+  LV  LCK 
Sbjct: 282 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 341

Query: 237 GLLGDAVKFLGEVLADDDGKATSD--------------VITSTILMDSYFKNGDKFQALA 282
           G +  A +   +++   D  A SD              V+T   L+D   K      A  
Sbjct: 342 GNISKAFEVYAKLIGTSD-SADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 400

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           L + M     + + + Y+ LI+GFC  G I SA   F QM K G+LP V TY +L++ + 
Sbjct: 401 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 460

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K G+LD A      + K    P+ ++Y  +I GLC  G+  KA + L  M EK   P   
Sbjct: 461 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 520

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI---------------LAET 447
            +  +IDG G+ G +  +  +   M   G S N  T+  LI               L E 
Sbjct: 521 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 580

Query: 448 R------------------GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
           +                    S   +  + +EM   G  P    Y +LI      G + +
Sbjct: 581 KQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEI 640

Query: 490 ALQLYDEMLR--RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           A++L+ EM+     +  D   Y  LI+  C    ++EA  +++++   G   +   F  L
Sbjct: 641 AMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCL 700

Query: 548 KKRYRRMKESDKA 560
            K    +K+ D+A
Sbjct: 701 IKGLVEVKKWDEA 713



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 184/387 (47%), Gaps = 19/387 (4%)

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           LC +G  +KA  +I+EM      P+ +TY+  IT  C   +++KA  LF  M   G+ P+
Sbjct: 198 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 257

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
             T+ IL+ + CK GL+  A     E+ +      +  V+T T L+ +Y K     QA  
Sbjct: 258 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVG---CSPTVVTYTALIHAYLKAKQVPQAND 314

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML----------------KRG 326
           +++ M     + + V Y  L++G C  G+IS AF  + +++                +  
Sbjct: 315 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 374

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+V+TY  L++ LCK  K+D A      +  +G  P+ I Y  +I G C  G I  A+
Sbjct: 375 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 434

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E  L M +   +P  H +  +ID   + G L  A  +   ML    + NV T+ A+I   
Sbjct: 435 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 494

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            R G    A  L   M   G  P+V TY  LI      G I L+L L+ +M R+G +P+ 
Sbjct: 495 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 554

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +TY  LI   CA G + +A  +  +++
Sbjct: 555 VTYRVLINHLCAAGLLDKARLLLGEMK 581



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 201/467 (43%), Gaps = 37/467 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK------ADHVI 176
           +++   C       A  L  +M   G  P  + +N  +  +C    L        A+ + 
Sbjct: 117 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIY 176

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC-- 234
            EM       N      F    C V + DKA  L   M   G  P+  T++ ++  LC  
Sbjct: 177 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 236

Query: 235 ----KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
               K  LL   +K +G          T DV T TIL+DS+ K G   QA  L+ +M   
Sbjct: 237 TKVEKAFLLFQEMKMVG---------VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 287

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
                +V Y  LI+ +     +  A   F +M+  G  P+ +TY  L++ LCK G + +A
Sbjct: 288 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 347

Query: 351 SHFYGVLSKTG----------------VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
              Y  L  T                 +AP+ ++Y  ++ GLC    +  A E L +ML 
Sbjct: 348 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 407

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
               P   +++ +IDG+ + G + +A  +   M   G   +V T+ +LI    + G +  
Sbjct: 408 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 467

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  +  +ML D   P+V TY  +I   C +G    AL+L   M  +G +P+++TYT LI 
Sbjct: 468 AMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID 527

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
           G    G +  + ++F ++   G + +++ +R+L          DKAR
Sbjct: 528 GLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 574



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 180/400 (45%), Gaps = 27/400 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMI----------------QKGTVPDVLTHNYLVNELCKI 166
           A++  LC  G I  A  +  K+I                +    P+V+T+  LV+ LCK 
Sbjct: 333 ALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKA 392

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
             ++ A  ++  M      PN   Y+A I G+C+  ++D A  +F  M   G  P+  T+
Sbjct: 393 HKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTY 452

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
             L+  + K G L  A+K L ++L D     T +V+T T ++D   + G+  +AL L + 
Sbjct: 453 TSLIDRMFKDGRLDLAMKVLSQMLKDS---CTPNVVTYTAMIDGLCRIGESEKALKLLSL 509

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +K    ++V Y  LI+G    G I  +   F QM ++G  P+ +TY  L+N LC  G 
Sbjct: 510 MEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGL 569

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           LD+A    G + +T        Y+  IQG       + +   L  M     VP   ++ +
Sbjct: 570 LDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGM 627

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT----FNALILAETRGGSIFDAFSLKKEM 462
           +ID + + G L  A  +   M+   V S+V T    + +LI A      + +AF L  EM
Sbjct: 628 LIDCFSKAGRLEIAMELHKEMME--VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEM 685

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
              G  P++  +  LI     +     ALQL   +   G+
Sbjct: 686 TRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/514 (23%), Positives = 217/514 (42%), Gaps = 70/514 (13%)

Query: 88  NALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           +ALD+I +E+  +L T+  T  +   +E  Y                  A+    +M   
Sbjct: 28  DALDMIEREDF-KLDTVLCTHMISGLMEASY---------------FDEAMSFLHRMRCN 71

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
             +P+V+T+  L++   K   L     +I  M     +PN + +N+ +  YC   +   A
Sbjct: 72  SCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYA 131

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKK------GLLGDAVKFLGEVLA---------- 251
             L + M   G  P  V +NI + ++C +       LL  A K  GE+LA          
Sbjct: 132 YKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNV 191

Query: 252 -------------DDDGKATSDVITSTILMD--------SYFKNGDKFQ-ALALWNDMFQ 289
                        D   +   +++    + D        ++  +  K + A  L+ +M  
Sbjct: 192 ANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 251

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             +  D+  Y +LI+ FC  G I  A   F +M   G  P V+TY  L++   K  ++ +
Sbjct: 252 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQ 311

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS------------- 396
           A+  +  +   G  P+ ++Y  ++ GLC  G+I KA E    ++  S             
Sbjct: 312 ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCED 371

Query: 397 ---VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
              + P    +  ++DG  +   + +A  + D MLS G   N   ++ALI    + G I 
Sbjct: 372 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 431

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A  +  +M   G  P V TY  LI      G + LA+++  +ML+   TP+++TYT +I
Sbjct: 432 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 491

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G C  G  ++A ++ + ++  G + + + +  L
Sbjct: 492 DGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 525



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 178/443 (40%), Gaps = 30/443 (6%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           M + G   D  T     + LCK G    A D + RE  ++    +       I+G    +
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKL----DTVLCTHMISGLMEAS 56

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
             D+A+     M  N   PN VT+  L+    KK  LG   + +  ++ +      S + 
Sbjct: 57  YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPS-LF 115

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS------AF 316
            S  L+ SY    D   A  L N M         V YN+ I   C    + S      A 
Sbjct: 116 NS--LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAE 173

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             + +ML    + + +       CLC  GK D+A      + + G  PD  +Y  +I  L
Sbjct: 174 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFL 233

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C    + KA      M    V P+ + + ++ID + + G +  A  + + M S G S  V
Sbjct: 234 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 293

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+ ALI A  +   +  A  +   M+  G  P+  TY  L+   C  G+I  A ++Y +
Sbjct: 294 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 353

Query: 497 ML----------------RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           ++                R  + P+++TY  L+ G C    +  A E+   + + G   +
Sbjct: 354 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 413

Query: 541 HIPFRILKKRYRRMKESDKARDI 563
           HI +  L   + +  + D A+++
Sbjct: 414 HIVYDALIDGFCKAGKIDSAQEV 436



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 132/279 (47%), Gaps = 33/279 (11%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           +C        + ++I  +   G++  A+ +  +M++    P+V+T+  +++ LC+IG+ E
Sbjct: 442 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 501

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           KA  ++  M E   SPN  TY A I G  +  ++D +L LF+ M+  G  PN VT+ +L+
Sbjct: 502 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 561

Query: 231 HALCKKGLLGDAVKFLGE-----------------------------VLADDDGKATSDV 261
           + LC  GLL  A   LGE                             +L + +   T  +
Sbjct: 562 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPI 621

Query: 262 I-TSTILMDSYFKNGDKFQALALWNDMFQ--KNIQTDIVAYNVLINGFCLNGDISSAFAY 318
                +L+D + K G    A+ L  +M +   +++TD   Y  LI   CL   +  AF  
Sbjct: 622 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 681

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF-YGV 356
           + +M +RGF+P++  +  L+  L +  K DEA    YG+
Sbjct: 682 YSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGI 720



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 146/335 (43%), Gaps = 38/335 (11%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R TL  +   + A++  LC   K+  A  L   M+  G  P+ + ++ L++  CK G ++
Sbjct: 372 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 431

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A  V  +M++    P+  TY + I    +   LD A+ + S M  +   PN VT+  ++
Sbjct: 432 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 491

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LC+ G    A+K L   L ++ G  + +V+T T L+D   K G    +L L+  M +K
Sbjct: 492 DGLCRIGESEKALKLLS--LMEEKG-CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 548

Query: 291 NIQTDIVAYNVLINGFC----------LNGDISSAF------AYFC-------------- 320
               + V Y VLIN  C          L G++   +       Y C              
Sbjct: 549 GCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLG 608

Query: 321 ---QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK--TGVAPDQISYKTIIQG 375
              +M   G +P    Y  L++C  K G+L+ A   +  + +  + V  D   Y ++IQ 
Sbjct: 609 ILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQA 668

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
           LC+   + +A      M  +  VPE  ++  +I G
Sbjct: 669 LCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKG 703



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 162/367 (44%), Gaps = 24/367 (6%)

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI--LMD-S 270
           M+ +G   +R T     HALCK+G   DA+    +++  +D K  + + T  I  LM+ S
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADAL----DMIEREDFKLDTVLCTHMISGLMEAS 56

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           YF      +A++  + M   +   ++V Y  L++GF     +         M+  G  P+
Sbjct: 57  YFD-----EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPN 111

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
              +N+L++  C +     A      ++  G  P  + Y   I  +C  G        LL
Sbjct: 112 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC--GQEKLPSPDLL 169

Query: 391 SMLEKSVVPEPHIWNVIID-----GYGRC----GDLSNAFSIRDLMLSFGVSSNVFTFNA 441
            + EK +  E    N +++      + RC    G    AF +   M+  G   +  T++ 
Sbjct: 170 DLAEK-IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSK 228

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I        +  AF L +EM + G+ PDV+TY +LI + C  G I  A  L++EM   G
Sbjct: 229 VITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 288

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
            +P ++TYT LI  +     + +A ++F ++   G   + + +  L     +     KA 
Sbjct: 289 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 348

Query: 562 DIHQKWL 568
           +++ K +
Sbjct: 349 EVYAKLI 355


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 229/512 (44%), Gaps = 26/512 (5%)

Query: 49  LPCTLNDIMSYVGDQCRSKT-----RHWFSNKDSDNEGNPQA--VFNAL-DLILKENLDR 100
           +PCT   +++ VG   R+       + ++          P A  ++N L D +L+EN+  
Sbjct: 92  VPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTAPRLYNHLIDALLRENMVG 151

Query: 101 -----LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
                   MR  G     ++ +   +  ++R LC   ++G A  +  +M  KG  PD +T
Sbjct: 152 AVALVCGNMRKDG-----VQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVT 206

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +  +V+ LC +G +++A  V+         P  A+YNA I   CR   + +   +   M 
Sbjct: 207 YGTIVSALCTLGRVDEATEVLSA-----APPVAASYNAVILALCREFRMQEVFAVVGDMV 261

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
             G++PN +T+  +V+A CK G L  A   L  ++       T +V T T L+   F +G
Sbjct: 262 GRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITG---CTPNVATFTALVGGLFNDG 318

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
               AL +W  M  +      V+YNVLI G C  GD+  A +    M + G  P+  TY+
Sbjct: 319 RVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYS 378

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           TL++   K G LD A   +  ++++G  P+ + Y  ++   C      +A   +  ML +
Sbjct: 379 TLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVE 438

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
           +  P    +N +I     C  +  A  +   M   G   N  T+N L+    R G+  DA
Sbjct: 439 NCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDA 498

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             +  EM   GI   + TYN ++   C +     A+     M+ RGI PD  T+T +I  
Sbjct: 499 LQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHA 558

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +C  G ++ A  +   +  +    + + + IL
Sbjct: 559 YCKEGEVRMAAWILGAMNVVNCGRNILVYTIL 590



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 196/415 (47%), Gaps = 8/415 (1%)

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +N+L++ L +   +     V   M +    PN  TYN  +   C+ + +  A  +   MA
Sbjct: 137 YNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMA 196

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
             G  P+ VT+  +V ALC  G + +A + L    A     A+ + +   +  +  F+  
Sbjct: 197 TKGCPPDDVTYGTIVSALCTLGRVDEATEVLS---AAPPVAASYNAVILALCRE--FRMQ 251

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
           + F   A+  DM  + +Q +++ Y  ++N FC  G++  A A   +M+  G  P+V T+ 
Sbjct: 252 EVF---AVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFT 308

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            L+  L   G++ +A   +  +   G AP  +SY  +I+GLC  GD+  A   L  M + 
Sbjct: 309 ALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQH 368

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
              P    ++ +IDG+ + GDL  A SI + M   G   NV  +  ++    +      A
Sbjct: 369 GCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQA 428

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            SL  +ML++   P+  T+N LI + CN   +  AL ++ EM R G  P+  TY EL+ G
Sbjct: 429 ESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHG 488

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
               GN  +A ++  ++Q  G+ +  + +  +     +M+   +A     + ++R
Sbjct: 489 LFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVR 543



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 173/399 (43%), Gaps = 39/399 (9%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AVI  LC   ++     +   M+ +G  P+V+T+  +VN  CK G+L  A  ++  M   
Sbjct: 239 AVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVIT 298

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +PN AT+ A + G      +  AL ++  M   G  P+ V++N+L+  LC  G L  A
Sbjct: 299 GCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGA 358

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY--- 299
              L ++   +      +  T + L+D + K GD   A+++WNDM +   + ++V Y   
Sbjct: 359 SSVLNDM---EQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNM 415

Query: 300 --------------------------------NVLINGFCLNGDISSAFAYFCQMLKRGF 327
                                           N LI   C    +  A   F +M + G 
Sbjct: 416 VGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGC 475

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+  TYN LL+ L ++G   +A      +   G+    ++Y T++ GLC      +A  
Sbjct: 476 PPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMF 535

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
           F+  M+ + + P+   +  II  Y + G++  A  I   M       N+  +  L+    
Sbjct: 536 FVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELC 595

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI-GASCNLG 485
               + DA     +ML +GI+P+  T+N+L+ G   NLG
Sbjct: 596 NQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGVFRNLG 634


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 200/423 (47%), Gaps = 6/423 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+ LT N ++  +C++G ++KA  V RE+     +P+  TY+  + G C+   +D+A+ L
Sbjct: 168 PNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSL 227

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   G  PN V  N+L+ ALCKKG LG A K +  +          + +T   L+  
Sbjct: 228 LDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKG---CVPNEVTYNALVHG 284

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
               G   +A++L N M       + V +  LINGF + G  S        +  RG   +
Sbjct: 285 LCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGN 344

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
              Y++L++ LCK+GK ++A   +  +   G  P+ I Y  +I GLC  G + +AR FL 
Sbjct: 345 EYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLS 404

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M  K  +P    ++ ++ GY   GD   A  +   M +     N   ++ LI    + G
Sbjct: 405 EMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDG 464

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG--ITPDIIT 508
              +A  + K+ML  GI  DV  Y+ +I   CN   +   L+L+++ML +G  + PD+IT
Sbjct: 465 KFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVIT 524

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR-MKESDKARDIHQKW 567
           Y  L+   C + ++  A ++   +   G   D I   I  K  R  M      R+   + 
Sbjct: 525 YNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDEL 584

Query: 568 LLR 570
           ++R
Sbjct: 585 VVR 587



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 198/406 (48%), Gaps = 7/406 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI+ +C  G +  A+ + R++  +   PD  T++ L++ LCK   +++A  ++ EM    
Sbjct: 176 VIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEG 235

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN   +N  I+  C+  +L +A  L   M   G  PN VT+N LVH LC KG L  AV
Sbjct: 236 TFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAV 295

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L +++++   K   + +T   L++ +   G       +   +  +  + +   Y+ LI
Sbjct: 296 SLLNQMVSN---KCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLI 352

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G  + A   + +M+ +G  P+ I Y+ L++ LC++GKLDEA  F   +   G  
Sbjct: 353 SGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYL 412

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+  +Y ++++G    GD  KA      M   + +     ++++I+G  + G    A  +
Sbjct: 413 PNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMV 472

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG--IFPDVFTYNLLIGAS 481
              MLS G+  +V  ++++I        +     L  +ML  G  + PDV TYN+L+ A 
Sbjct: 473 WKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAF 532

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           C    I  A+ + + ML +G  PD IT    +K    R NM   ++
Sbjct: 533 CIQKSIFRAIDILNIMLDQGCDPDFITCDIFLK--TLRENMNPPQD 576



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 191/397 (48%), Gaps = 6/397 (1%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           LE  +HV+   S +   PN  T+N  I   CR+  +DKA+ +F  +      P+  T++ 
Sbjct: 152 LEFYNHVVASKS-LNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYST 210

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L+H LCK+  + +AV  L E+  +       +++   +L+ +  K GD  +A  L ++MF
Sbjct: 211 LMHGLCKEERIDEAVSLLDEMQVEG---TFPNLVAFNVLISALCKKGDLGRAAKLVDNMF 267

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            K    + V YN L++G CL G +  A +   QM+    +P+ +T+ TL+N    QG+  
Sbjct: 268 LKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRAS 327

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           + +     L   G   ++  Y ++I GLC  G   +A E    M+ K   P   +++ +I
Sbjct: 328 DGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALI 387

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           DG  R G L  A      M + G   N FT+++L+      G    A  + KEM  +   
Sbjct: 388 DGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCI 447

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
            +   Y++LI   C  G    AL ++ +ML RGI  D++ Y+ +I G C    +++  ++
Sbjct: 448 HNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKL 507

Query: 529 FAKIQTLGLAI--DHIPFRILKKRYRRMKESDKARDI 563
           F ++   G  +  D I + IL   +   K   +A DI
Sbjct: 508 FNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDI 544



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 174/381 (45%), Gaps = 1/381 (0%)

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN-GIRPNRVTH 226
           D    + V+ +M   R       +      Y + +  +KA+ LF  M      +    + 
Sbjct: 76  DFRSLEEVLHQMKRERRVFLEKNFIVMFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSF 135

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           N +++ + ++GL   A++F   V+A        + +T  +++ +  + G   +A+ ++ +
Sbjct: 136 NSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFRE 195

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           +  +N   D   Y+ L++G C    I  A +   +M   G  P+++ +N L++ LCK+G 
Sbjct: 196 IPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGD 255

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           L  A+     +   G  P++++Y  ++ GLC+ G + KA   L  M+    VP    +  
Sbjct: 256 LGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGT 315

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +I+G+   G  S+   +   + + G   N + +++LI    + G    A  L KEM+  G
Sbjct: 316 LINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKG 375

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             P+   Y+ LI   C  G +  A     EM  +G  P+  TY+ L++G+   G+  +A 
Sbjct: 376 CGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAI 435

Query: 527 EVFAKIQTLGLAIDHIPFRIL 547
            V+ ++       + + + IL
Sbjct: 436 LVWKEMANNNCIHNEVCYSIL 456



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 146/325 (44%), Gaps = 61/325 (18%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I  LC  GK   A+ L ++M+ KG  P+ + ++ L++ LC+ G L++A   + EM 
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  TY++ + GY    +  KA+ ++  MANN    N V ++IL++ LCK G   
Sbjct: 408 NKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDG--- 464

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
              KF+                                +AL +W  M  + I+ D+VAY+
Sbjct: 465 ---KFM--------------------------------EALMVWKQMLSRGIKLDVVAYS 489

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFL--PDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
            +I+GFC    +      F QML +G +  PDVITYN LLN  C Q  +  A     ++ 
Sbjct: 490 SMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIML 549

Query: 359 KTGVAPDQIS----YKTIIQGLCIHGD-----------------IVKAREFLLSMLEKSV 397
             G  PD I+     KT+ + +    D                  + A + +  M+ K +
Sbjct: 550 DQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFL 609

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFS 422
           +P+   W +++    +  ++  A S
Sbjct: 610 LPKASTWAMVVQQVCKPKNVRKAIS 634


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 185/371 (49%), Gaps = 6/371 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           ++++ G  P V  +N L+N+ CK G +  A  +  E+ +    P   ++N  I G C+  
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            LD+   L  TM  N I P+  T+++L+H LCK+G L  A +   E+          + I
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEM---QQRGLRPNGI 329

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T T L+D   ++     A+  ++ M    ++ D+V YN L+NG C  GD++ A     +M
Sbjct: 330 TFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
              G  PD ITY TL++  CK+G L+ A      +++ GV  D +++  +I G C  G +
Sbjct: 390 RMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A   L  M+E  + P+   + ++IDGY + G++   F +   M   G    V T+N L
Sbjct: 450 RDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVL 509

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +    + G + +A  L + ML  G+ PD  TYN+L+   C  G     L+L +E   +G+
Sbjct: 510 MNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGL 566

Query: 503 TPDIITYTELI 513
             D   YT L+
Sbjct: 567 IVDYAYYTSLV 577



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 171/370 (46%), Gaps = 38/370 (10%)

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           E+ E    P    YN  I  +C+   +  A  +F+ +   G+RP  V+ N L++ LCK  
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKS- 271

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
                                              +N D  +   L   M +  I  D+ 
Sbjct: 272 -----------------------------------RNLD--EGFRLKKTMEENRIYPDVF 294

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            Y+VLI+G C  G +  A   F +M +RG  P+ IT+  L++  C+  ++D A + Y  +
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQM 354

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
              GV PD + Y T++ GLC  GD+ KAR+ +  M    + P+   +  +IDGY + GDL
Sbjct: 355 LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDL 414

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
            +A  IR  M   GV  +   F ALI    R G + DA    +EM+  G+ PD  TY ++
Sbjct: 415 ESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMV 474

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I   C  G++ +  +L  EM   G  P +ITY  L+ G C +G MK A  +   +  LG+
Sbjct: 475 IDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGV 534

Query: 538 AIDHIPFRIL 547
             D I + IL
Sbjct: 535 TPDDITYNIL 544



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 152/303 (50%), Gaps = 3/303 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC    +     L++ M +    PDV T++ L++ LCK G L+ A+ +  EM + 
Sbjct: 263 TLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  T+ A I G CR   +D A++ +  M   G++P+ V +N L++ LCK G +  A
Sbjct: 323 GLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKA 382

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K + E+          D IT T L+D Y K GD   A+ +   M ++ +  D VA+  L
Sbjct: 383 RKLVDEMRMVG---MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAL 439

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC +G +  A     +M++ G  PD  TY  +++  CK+G +         +   G 
Sbjct: 440 ISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH 499

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  I+Y  ++ GLC  G +  A   L +ML   V P+   +N++++G+ + G   +   
Sbjct: 500 KPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLK 559

Query: 423 IRD 425
           +R+
Sbjct: 560 LRN 562



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 159/322 (49%), Gaps = 3/322 (0%)

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
            +I+   + +KG   D+   +   + D  G   S+ +    LM +Y+ +G    A+  + 
Sbjct: 121 QSIIRFLVSRKG--KDSAASVFAAILDTAGTRCSNFVFDA-LMIAYWDSGFVSDAIQCFR 177

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            +   N Q        L++    +    + + ++ ++L+ GF P V  YN L+N  CK+G
Sbjct: 178 LVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEG 237

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
            + +A   +  + K G+ P  +S+ T+I GLC   ++ +      +M E  + P+   ++
Sbjct: 238 SIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYS 297

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
           V+I G  + G L  A  + D M   G+  N  TF ALI  + R   I  A +   +ML  
Sbjct: 298 VLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTM 357

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G+ PD+  YN L+   C +G ++ A +L DEM   G+ PD ITYT LI G+C  G+++ A
Sbjct: 358 GVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESA 417

Query: 526 EEVFAKIQTLGLAIDHIPFRIL 547
            E+   +   G+ +D++ F  L
Sbjct: 418 MEIRKGMNEEGVVLDNVAFTAL 439



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 133/285 (46%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+D    +         ++++ +      +  YN+LIN FC  G I  A   F ++ KRG
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P  +++NTL+N LCK   LDE       + +  + PD  +Y  +I GLC  G +  A 
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           +    M ++ + P    +  +IDG  R   + +A +    ML+ GV  ++  +N L+   
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G +  A  L  EM + G+ PD  TY  LI   C  G +  A+++   M   G+  D 
Sbjct: 374 CKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDN 433

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           + +T LI G C  G +++AE    ++   G+  D   + ++   Y
Sbjct: 434 VAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGY 478



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 150/297 (50%), Gaps = 6/297 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  LC  G++  A  L  +M Q+G  P+ +T   L++  C+   ++ A +  
Sbjct: 292 DVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTY 351

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M  M   P+   YN  + G C+V +++KA  L   M   G++P+++T+  L+   CK+
Sbjct: 352 HQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKE 411

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A++    +  +++G    D +  T L+  + ++G    A     +M +  ++ D 
Sbjct: 412 GDLESAMEIRKGM--NEEG-VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDD 468

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y ++I+G+C  G++   F    +M   G  P VITYN L+N LCKQG++  A+     
Sbjct: 469 ATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEA 528

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +   GV PD I+Y  +++G C +G   KA + L    EK ++ +   +  ++  Y +
Sbjct: 529 MLNLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDYAYYTSLVSEYNK 582



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 96/176 (54%)

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
           F   +LE    P+   +N++I+ + + G + +A  I + +   G+     +FN LI    
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +  ++ + F LKK M  + I+PDVFTY++LI   C  G + +A QL+DEM +RG+ P+ I
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           T+T LI G C    +  A   + ++ T+G+  D + +  L     ++ + +KAR +
Sbjct: 330 TFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKL 385



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 6/193 (3%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +I   C  G + +A+ +R+ M ++G V D +    L++  C+ G +  A+
Sbjct: 394 MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAE 453

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             +REM E    P+ ATY   I GYC+   +     L   M  NG +P  +T+N+L++ L
Sbjct: 454 RTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G + +A   L  +L   +   T D IT  IL++ + KNG     L L N   +K + 
Sbjct: 514 CKQGQMKNANMLLEAML---NLGVTPDDITYNILLEGHCKNGKAEDLLKLRN---EKGLI 567

Query: 294 TDIVAYNVLINGF 306
            D   Y  L++ +
Sbjct: 568 VDYAYYTSLVSEY 580



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 100/213 (46%)

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
           FY  + + G  P    Y  +I   C  G I  A+     + ++ + P    +N +I+G  
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +  +L   F ++  M    +  +VFT++ LI    + G +  A  L  EM   G+ P+  
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           T+  LI   C    I  A+  Y +ML  G+ PD++ Y  L+ G C  G++ +A ++  ++
Sbjct: 330 TFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           + +G+  D I +  L   Y +  + + A +I +
Sbjct: 390 RMVGMKPDKITYTTLIDGYCKEGDLESAMEIRK 422



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 93/228 (40%)

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           + ++GK   AS F  +L   G       +  ++      G +  A +    +   +    
Sbjct: 128 VSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIP 187

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
            H    ++D           ++    +L +G    V  +N LI    + GSI DA  +  
Sbjct: 188 FHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFN 247

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           E+   G+ P   ++N LI   C   ++    +L   M    I PD+ TY+ LI G C  G
Sbjct: 248 EIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEG 307

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            +  AE++F ++Q  GL  + I F  L     R +  D A + + + L
Sbjct: 308 RLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQML 355


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 227/520 (43%), Gaps = 74/520 (14%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D R     I  LC       AL + RKM   G VP   T N +V+ L K G +E+A 
Sbjct: 208 IEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEAL 267

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV--- 230
           H+  E+       +       + GYC   E+ KAL +F     +G+ P  VT+ +L+   
Sbjct: 268 HIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGC 327

Query: 231 ---------HALCK------------------KGLLG-----DAVKFLGEVLADDDGKAT 258
                    + LC+                  KGLL      DAV    E +AD      
Sbjct: 328 TEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKE-MAD---SGI 383

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            D  T  IL+    +     +AL LW  M +  ++  IV Y+ L+  +C+NG +  A   
Sbjct: 384 PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKL 443

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           + +M  +GF P+V+TY TL+     +   D+A      + + GV+ +  +Y T+I GLC+
Sbjct: 444 YTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCV 503

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G + +  E L     +  VP    +N II+G+ + G + +AF++   M + G+  N+ T
Sbjct: 504 VGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVT 563

Query: 439 -----------------------------------FNALILAETRGGSIFDAFSLKKEML 463
                                              +N+LI    + G++  A  +   ML
Sbjct: 564 YTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLML 623

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
            DG+ P++  YN  I    NL  +  AL+LY++M++ GI  D  TYT LI G    GN+ 
Sbjct: 624 KDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVT 683

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            A ++++++   G   DHI F  L     R  + D AR +
Sbjct: 684 FALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKL 723



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 218/451 (48%), Gaps = 6/451 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +IR     G    A  L R+M   G +P     N ++  L      + A  + +EM+
Sbjct: 320 YTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMA 379

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    P+  TYN  I   C+  ++ +AL+L+  M   G++P  VT++ L+   C  G + 
Sbjct: 380 D-SGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMD 438

Query: 241 DAVKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           +AVK   E+     GK  T +V+T T LM  +       +A AL  +M Q  +  +   Y
Sbjct: 439 EAVKLYTEM----PGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTY 494

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N LING C+ G +        +    GF+P  +TYN+++N   K G +  A   Y  +  
Sbjct: 495 NTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCA 554

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ P+ ++Y + I G C       A + L  +  K + P+   +N +I G+ + G++S+
Sbjct: 555 KGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSH 614

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +  LML  G+  N+  +N+ I        + +A  L ++M+ +GI  D  TY  LI 
Sbjct: 615 ALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLID 674

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                G++  AL+LY EM+ +G  PD IT+T L  G C  G++ +A ++  ++  L +  
Sbjct: 675 GFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRP 734

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           + + + +L   Y R  +  +A  +H + L R
Sbjct: 735 NVLMYNMLINGYLRNGKLQEAFRLHDEMLER 765



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 178/372 (47%), Gaps = 13/372 (3%)

Query: 115 ETDYRRHVAVIRDL----CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           ET  + ++     L    C+ G +  A+ L  +M  KG  P+V+T+  L+         +
Sbjct: 414 ETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFD 473

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYC---RVNELDKALHLFSTMANNGIRPNRVTHN 227
           KA  ++ EM +   S N  TYN  I G C   RV E+ + L  F T    G  P  +T+N
Sbjct: 474 KAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFET---EGFVPTAMTYN 530

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            +++   K G++G A     ++ A        +++T T  +D Y K      AL + ND+
Sbjct: 531 SIINGFIKAGMMGSAFAVYQQMCAKG---IPPNIVTYTSFIDGYCKTSCCDLALKMLNDV 587

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
             K ++ DI AYN LI GFC  G++S A      MLK G LP++  YN+ +        +
Sbjct: 588 RCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMM 647

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           +EA   Y  + K G+  D  +Y T+I G    G++  A +    M+ K  +P+   +  +
Sbjct: 648 EEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTAL 707

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
             G  R GD+ +A  + D M    +  NV  +N LI    R G + +AF L  EML   I
Sbjct: 708 THGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKI 767

Query: 468 FPDVFTYNLLIG 479
            PD  TY++L+G
Sbjct: 768 MPDDTTYDILVG 779



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 210/466 (45%), Gaps = 17/466 (3%)

Query: 51  CTLNDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAVFNAL--DLILKENLDRLKTMRDTG 108
           CT   +     + CR    H      S NE N   V   L  D + K+ +   K M D+G
Sbjct: 327 CTEEGMPEKAYELCRQMRDHGL--LPSTNEFN--MVIKGLLNDKLWKDAVSLFKEMADSG 382

Query: 109 PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
                   D   +  +I  LC   KI  AL L  KM + G  P ++T++ L+   C  G 
Sbjct: 383 I------PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGC 436

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           +++A  +  EM     +PN  TY   + G+      DKA  L + M  NG+  N  T+N 
Sbjct: 437 MDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNT 496

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDM 287
           L++ LC  G + +    +GE+L   + +      +T   +++ + K G    A A++  M
Sbjct: 497 LINGLCVVGRVCE----VGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
             K I  +IV Y   I+G+C       A      +  +G  PD+  YN+L+   C++G +
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNM 612

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
             A     ++ K G+ P+   Y + I G      + +A      M+++ +  +   +  +
Sbjct: 613 SHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTL 672

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           IDG+ + G+++ A  +   M++ G   +  TF AL     R G I DA  L  EM    I
Sbjct: 673 IDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDI 732

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            P+V  YN+LI      G +  A +L+DEML R I PD  TY  L+
Sbjct: 733 RPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 139/295 (47%), Gaps = 1/295 (0%)

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           ++M + FK G    A+ L+++M    I+ D    +V I   C   D + A     +M   
Sbjct: 182 VVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDA 241

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           GF+P   T+N++++ L K G+++EA H    L  TG     +   T++ G C+  ++ KA
Sbjct: 242 GFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKA 301

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            +     L   +VP    + V+I G    G    A+ +   M   G+  +   FN +I  
Sbjct: 302 LDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKG 361

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
                   DA SL KEM   GI PD FTYN+LI   C    I  AL L+++M   G+ P 
Sbjct: 362 LLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPY 420

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           I+TY  L+  +C  G M EA +++ ++   G   + + +  L K +      DKA
Sbjct: 421 IVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKA 475



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 151/333 (45%), Gaps = 4/333 (1%)

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D A+ LF  M  + I P++   ++ + +LCK   L DA + L  +    D        T 
Sbjct: 194 DDAVRLFDEMPASEIEPDQRVCSVAIASLCK---LRDANRALLVLRKMQDAGFVPWDFTF 250

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
             ++D   K G   +AL + +++     +  +V    L++G+CL  ++  A   F + L+
Sbjct: 251 NSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLR 310

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G +P  +TY  L+    ++G  ++A      +   G+ P    +  +I+GL ++  + K
Sbjct: 311 DGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL-LNDKLWK 369

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
               L   +  S +P+   +N++I    +   +  A ++ + M   GV   + T+++L+L
Sbjct: 370 DAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLL 429

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
                G + +A  L  EM   G  P+V TY  L+    N      A  L  EM + G++ 
Sbjct: 430 CYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSC 489

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           +  TY  LI G C  G + E  E+  + +T G 
Sbjct: 490 NDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF 522



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 7/212 (3%)

Query: 101 LKTMRDTGPVRCT-LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYL 159
           LK + D   VRC  L  D   + ++I   C  G +  AL +   M++ G +P++  +N  
Sbjct: 581 LKMLND---VRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSF 637

Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
           +     +  +E+A  +  +M +     + ATY   I G+ +   +  AL L+S M   G 
Sbjct: 638 ITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGN 697

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            P+ +T   L H LC+ G + DA K L E+   D      +V+   +L++ Y +NG   +
Sbjct: 698 IPDHITFTALTHGLCRNGDIDDARKLLDEMNRLD---IRPNVLMYNMLINGYLRNGKLQE 754

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
           A  L ++M ++ I  D   Y++L+    L  D
Sbjct: 755 AFRLHDEMLERKIMPDDTTYDILVGMKSLGSD 786



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 1/227 (0%)

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +M  +G   D   ++ ++    K+G  D+A   +  +  + + PDQ      I  LC   
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
           D  +A   L  M +   VP    +N ++D   + G +  A  I+D +L+ G   +V    
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            L+        +  A  + +E L DG+ P   TY +LI      G    A +L  +M   
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           G+ P    +  +IKG       K+A  +F ++   G+  D   + IL
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNIL 392


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 219/486 (45%), Gaps = 42/486 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQK----GTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           +++  L   GK+  AL L  KM+Q     G V D  T + +V  LC +G +E+   ++++
Sbjct: 167 SLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKD 226

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
                  P+   YN  I GYC+  +L  A      +   G+ P   T+  L++  CK G 
Sbjct: 227 RWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGE 286

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
                + L E+ A        +V     ++D+ FK G   +A      M +     DI  
Sbjct: 287 FEAVDQLLTEMAARG---LNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITT 343

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           YN +IN  C  G I  A  +  +  +RG LP+  +Y  L++  CKQG   +A+     ++
Sbjct: 344 YNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIA 403

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII---------- 408
           + G  PD +SY   I G+ +HG+I  A      M+EK V P+  I+NV++          
Sbjct: 404 EIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFP 463

Query: 409 -------------------------DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
                                    DG+ R G+L  A  I  +++  GV   +  +NA+I
Sbjct: 464 AMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMI 523

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G + DA S   +M      PD +TY+ +I        +  AL+++ +M++    
Sbjct: 524 KGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFK 583

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P++ITYT LI G C + +M  AE+VF  +++  L  + + +  L   + +  + +KA  I
Sbjct: 584 PNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSI 643

Query: 564 HQKWLL 569
            +  L+
Sbjct: 644 FELMLM 649



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 192/415 (46%), Gaps = 8/415 (1%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           LK ++  G V  T+ET    + A+I   C  G+      L  +M  +G   +V   N ++
Sbjct: 259 LKELKMKG-VLPTVET----YGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVI 313

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           +   K G + KA   +R M+EM   P+  TYN  I   C+   + +A          G+ 
Sbjct: 314 DAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLL 373

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           PN+ ++  L+HA CK+G   D VK  G +    +     D+++    +     +G+   A
Sbjct: 374 PNKFSYTPLMHAYCKQG---DYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVA 430

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           L +   M +K +  D   YNVL++G C NG   +      +ML R   PDV  + TL++ 
Sbjct: 431 LMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDG 490

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
             + G+LDEA   + V+ + GV P  + Y  +I+G C  G +  A   L  M      P+
Sbjct: 491 FIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPD 550

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
            + ++ +IDGY +  D+S+A  +   M+      NV T+ +LI    +   +  A  + +
Sbjct: 551 EYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFR 610

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            M    + P+V TY  L+G     G    A  +++ ML  G  P+  T+  LI G
Sbjct: 611 GMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLING 665



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 195/428 (45%), Gaps = 19/428 (4%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A    R+M + G  PD+ T+N ++N  CK G +++AD  + +  E    PN  +Y
Sbjct: 320 GLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSY 379

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              +  YC+  +  KA  +   +A  G +P+ V++   +H +   G +  A+    +++ 
Sbjct: 380 TPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMM- 438

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALW-NDMFQKNIQTDIVAYNVLINGFCLNG 310
             +     D     +LM    KNG +F A+ L  ++M  +N+Q D+  +  L++GF  NG
Sbjct: 439 --EKGVFPDAQIYNVLMSGLCKNG-RFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNG 495

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           ++  A   F  ++++G  P ++ YN ++   CK GK+ +A      +     APD+ +Y 
Sbjct: 496 ELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYS 555

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T+I G     D+  A +    M++    P    +  +I+G+ +  D+  A  +   M SF
Sbjct: 556 TVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSF 615

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG----- 485
            +  NV T+  L+    + G    A S+ + ML++G  P+  T++ LI    N       
Sbjct: 616 DLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVL 675

Query: 486 ---------HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
                       L L  +  ML  G    I  Y  +I   C  G +  A+ +  K+ T G
Sbjct: 676 IEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKG 735

Query: 537 LAIDHIPF 544
             ID + F
Sbjct: 736 FLIDSVCF 743



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 155/351 (44%), Gaps = 29/351 (8%)

Query: 87  FNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQ 146
           F A+ L+L E LDR             ++ D      ++      G++  A+ + + +I+
Sbjct: 462 FPAMKLLLSEMLDR------------NVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIR 509

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           KG  P ++ +N ++   CK G +  A   + +M  +  +P+  TY+  I GY + +++  
Sbjct: 510 KGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSS 569

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           AL +F  M  +  +PN +T+  L++  CKK  +  A K    + + D      +V+T T 
Sbjct: 570 ALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFD---LVPNVVTYTT 626

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC--------------LNGDI 312
           L+  +FK G   +A +++  M       +   ++ LING                +  + 
Sbjct: 627 LVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENER 686

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           S    +F  ML  G+   +  YN+++ CLCK G +D A      +   G   D + +  +
Sbjct: 687 SLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAM 746

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           + GLC  G   + R  +   L K  +     +++ +D Y   G LS A  I
Sbjct: 747 LHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVI 797


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 197/396 (49%), Gaps = 6/396 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M   G  P ++T   L+ +LC++    KA  +  +M +M+  P+   Y   I   C++N
Sbjct: 4   EMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKIN 63

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +LD A   F  M  +G  P++VT+ +LVH+L K        +   E+L+      + +++
Sbjct: 64  KLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGH---SPELV 120

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   +++ Y K G   QAL+L   +           Y+ LI+G C +     A   F   
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELF--E 178

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           +  G + DVI Y + ++ LCK GKLDEA   +  + + G APD +SY  II  LC    +
Sbjct: 179 MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG-VSSNVFTFNA 441
            +A+E +   +E+  +P   +  V++DG  +   +  A  I + ML  G  + +V T++A
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSA 298

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I    +   + DA+ + ++M   G  PDV TY  +I A C +G +  A +L+  M  RG
Sbjct: 299 VIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERG 358

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
              D++ Y  LI+G+C    + EA  +  ++   G+
Sbjct: 359 CASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 158/348 (45%), Gaps = 6/348 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  VI  LC   K+  A     +M+Q G +PD +T+  LV+ L K    E+   +  EM 
Sbjct: 52  YTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEML 111

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               SP   TY   + GYC+   +D+AL L   +   G  P+   ++ L+  LCK     
Sbjct: 112 SKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHE 171

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A + L E+ A D      DVI  T  +    K G   +A A+   M +     D V+YN
Sbjct: 172 EA-RELFEMAAGD----VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYN 226

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           V+I   C +  +S A     Q ++R  +P V     L++ LCK  +++EA      + + 
Sbjct: 227 VIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEA 286

Query: 361 G-VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
           G  AP  ++Y  +I GLC    +  A   L  M     VP+   +  IID + + G L  
Sbjct: 287 GDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDE 346

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           A  +   M   G +S+V  +N LI    R   + +A ++ +EM   GI
Sbjct: 347 ARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 173/381 (45%), Gaps = 6/381 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++IR LC       AL +  +MI     PD   +  ++  LCKI  L+ A     +M + 
Sbjct: 19  SLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQS 78

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY   +    +  + ++   +F  M + G  P  VT+  +V+  CK G +  A
Sbjct: 79  GCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQA 138

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  +  +     G++ S  + ST L+D   K+    +A  L+ +M   ++Q D++ Y   
Sbjct: 139 LSLMRRL--KGTGRSPSGSLYST-LIDGLCKHDRHEEARELF-EMAAGDVQ-DVIVYTSF 193

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C  G +  A A   +M++ G  PD ++YN ++  LCK  ++ EA        +   
Sbjct: 194 ISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKC 253

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS-VVPEPHIWNVIIDGYGRCGDLSNAF 421
            P       ++ GLC    + +A   L  MLE     P    ++ +IDG  +   L +A+
Sbjct: 254 MPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAY 313

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   M   G   +V T+ A+I A  + G + +A  L + M   G   DV  YN+LI   
Sbjct: 314 IVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGY 373

Query: 482 CNLGHIHLALQLYDEMLRRGI 502
           C    +  A+ + +EM  RGI
Sbjct: 374 CRAAKVDEAIAMIEEMAGRGI 394



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/395 (23%), Positives = 165/395 (41%), Gaps = 41/395 (10%)

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           EM     +P   T+ + I   C +N  +KAL +F  M +  ++P+   + +++  LCK  
Sbjct: 4   EMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCK-- 61

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
                                   I    L  SYF+             M Q     D V
Sbjct: 62  ------------------------INKLDLAASYFEQ------------MVQSGCLPDKV 85

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            Y VL++              F +ML +G  P+++TY T++N  CK G++D+A      L
Sbjct: 86  TYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRL 145

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
             TG +P    Y T+I GLC H    +ARE  L  +    V +  ++   I G  + G L
Sbjct: 146 KGTGRSPSGSLYSTLIDGLCKHDRHEEARE--LFEMAAGDVQDVIVYTSFISGLCKAGKL 203

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             A ++   M+  G + +  ++N +I +  +   + +A  L  + +     P V    +L
Sbjct: 204 DEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVL 263

Query: 478 IGASCNLGHIHLALQLYDEMLRRG-ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +   C    +  A  + + ML  G   P ++TY+ +I G C    + +A  V  K++  G
Sbjct: 264 VDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAG 323

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
              D + +  +   + ++   D+AR++ Q+   R 
Sbjct: 324 CVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERG 358


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/493 (28%), Positives = 214/493 (43%), Gaps = 50/493 (10%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI  LC   K+  A  L ++M   G  PDV T+  L++  CK G +E+A  + 
Sbjct: 287 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 346

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM  +  SP   TY A I  Y +  ++ +A  +F  M + G RPN VT+  LV  LCK 
Sbjct: 347 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 406

Query: 237 GLLGDAVKFLGEVLADDDGKATSD--------------VITSTILMDSYFKNGDKFQALA 282
           G +  A +   +++   D  A SD              V+T   L+D   K      A  
Sbjct: 407 GNISKAFEVYAKLIGTSD-SADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           L + M     + + + Y+ LI+GFC  G I SA   F QM K G+LP V TY +L++ + 
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K G+LD A      + K    P+ ++Y  +I GLC  G+  KA + L  M EK   P   
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 585

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI---------------LAET 447
            +  +IDG G+ G +  +  +   M   G S N  T+  LI               L E 
Sbjct: 586 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645

Query: 448 R------------------GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
           +                    S   +  + +EM   G  P    Y +LI      G + +
Sbjct: 646 KQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEI 705

Query: 490 ALQLYDEMLR--RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           A++L+ EM+     +  D   Y  LI+  C    ++EA  +++++   G   +   F  L
Sbjct: 706 AMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCL 765

Query: 548 KKRYRRMKESDKA 560
            K    +K+ D+A
Sbjct: 766 IKGLVEVKKWDEA 778



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 184/387 (47%), Gaps = 19/387 (4%)

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           LC +G  +KA  +I+EM      P+ +TY+  IT  C   +++KA  LF  M   G+ P+
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
             T+ IL+ + CK GL+  A     E+ +      +  V+T T L+ +Y K     QA  
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVG---CSPTVVTYTALIHAYLKAKQVPQAND 379

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML----------------KRG 326
           +++ M     + + V Y  L++G C  G+IS AF  + +++                +  
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 439

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+V+TY  L++ LCK  K+D A      +  +G  P+ I Y  +I G C  G I  A+
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E  L M +   +P  H +  +ID   + G L  A  +   ML    + NV T+ A+I   
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 559

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            R G    A  L   M   G  P+V TY  LI      G I L+L L+ +M R+G +P+ 
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 619

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +TY  LI   CA G + +A  +  +++
Sbjct: 620 VTYRVLINHLCAAGLLDKARLLLGEMK 646



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 201/467 (43%), Gaps = 37/467 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK------ADHVI 176
           +++   C       A  L  +M   G  P  + +N  +  +C    L        A+ + 
Sbjct: 182 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIY 241

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC-- 234
            EM       N      F    C V + DKA  L   M   G  P+  T++ ++  LC  
Sbjct: 242 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 301

Query: 235 ----KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
               K  LL   +K +G          T DV T TIL+DS+ K G   QA  L+ +M   
Sbjct: 302 TKVEKAFLLFQEMKMVG---------VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
                +V Y  LI+ +     +  A   F +M+  G  P+ +TY  L++ LCK G + +A
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412

Query: 351 SHFYGVLSKTG----------------VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
              Y  L  T                 +AP+ ++Y  ++ GLC    +  A E L +ML 
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
               P   +++ +IDG+ + G + +A  +   M   G   +V T+ +LI    + G +  
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 532

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  +  +ML D   P+V TY  +I   C +G    AL+L   M  +G +P+++TYT LI 
Sbjct: 533 AMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID 592

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
           G    G +  + ++F ++   G + +++ +R+L          DKAR
Sbjct: 593 GLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 639



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 177/391 (45%), Gaps = 27/391 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMI----------------QKGTVPDVLTHNYLVNELCKI 166
           A++  LC  G I  A  +  K+I                +    P+V+T+  LV+ LCK 
Sbjct: 398 ALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKA 457

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
             ++ A  ++  M      PN   Y+A I G+C+  ++D A  +F  M   G  P+  T+
Sbjct: 458 HKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTY 517

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
             L+  + K G L  A+K L ++L D     T +V+T T ++D   + G+  +AL L + 
Sbjct: 518 TSLIDRMFKDGRLDLAMKVLSQMLKDS---CTPNVVTYTAMIDGLCRIGESEKALKLLSL 574

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +K    ++V Y  LI+G    G I  +   F QM ++G  P+ +TY  L+N LC  G 
Sbjct: 575 MEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGL 634

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           LD+A    G + +T        Y+  IQG       + +   L  M     VP   ++ +
Sbjct: 635 LDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGM 692

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT----FNALILAETRGGSIFDAFSLKKEM 462
           +ID + + G L  A  +   M+   V S+V T    + +LI A      + +AF L  EM
Sbjct: 693 LIDCFSKAGRLEIAMELHKEMME--VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEM 750

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
              G  P++  +  LI     +     ALQL
Sbjct: 751 TRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 120/514 (23%), Positives = 217/514 (42%), Gaps = 70/514 (13%)

Query: 88  NALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           +ALD+I +E+  +L T+  T  +   +E  Y                  A+    +M   
Sbjct: 93  DALDMIEREDF-KLDTVLCTHMISGLMEASY---------------FDEAMSFLHRMRCN 136

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
             +P+V+T+  L++   K   L     +I  M     +PN + +N+ +  YC   +   A
Sbjct: 137 SCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYA 196

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKK------GLLGDAVKFLGEVLA---------- 251
             L + M   G  P  V +NI + ++C +       LL  A K  GE+LA          
Sbjct: 197 YKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNV 256

Query: 252 -------------DDDGKATSDVITSTILMD--------SYFKNGDKFQ-ALALWNDMFQ 289
                        D   +   +++    + D        ++  +  K + A  L+ +M  
Sbjct: 257 ANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 316

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             +  D+  Y +LI+ FC  G I  A   F +M   G  P V+TY  L++   K  ++ +
Sbjct: 317 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQ 376

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS------------- 396
           A+  +  +   G  P+ ++Y  ++ GLC  G+I KA E    ++  S             
Sbjct: 377 ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCED 436

Query: 397 ---VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
              + P    +  ++DG  +   + +A  + D MLS G   N   ++ALI    + G I 
Sbjct: 437 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 496

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A  +  +M   G  P V TY  LI      G + LA+++  +ML+   TP+++TYT +I
Sbjct: 497 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 556

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G C  G  ++A ++ + ++  G + + + +  L
Sbjct: 557 DGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 590



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/464 (23%), Positives = 190/464 (40%), Gaps = 30/464 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHVIREMSE 181
           A+++ L   G++     ++++M + G   D  T     + LCK G    A D + RE  +
Sbjct: 45  ALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFK 104

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
           +    +       I+G    +  D+A+     M  N   PN VT+  L+    KK  LG 
Sbjct: 105 L----DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGW 160

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
             + +  ++ +      S +  S  L+ SY    D   A  L N M         V YN+
Sbjct: 161 CKRIINMMMTEGCNPNPS-LFNS--LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 217

Query: 302 LINGFCLNGDISS------AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
            I   C    + S      A   + +ML    + + +       CLC  GK D+A     
Sbjct: 218 FIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIK 277

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + + G  PD  +Y  +I  LC    + KA      M    V P+ + + ++ID + + G
Sbjct: 278 EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG 337

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            +  A  + + M S G S  V T+ ALI A  +   +  A  +   M+  G  P+  TY 
Sbjct: 338 LIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYG 397

Query: 476 LLIGASCNLGHIHLALQLYDEML----------------RRGITPDIITYTELIKGHCAR 519
            L+   C  G+I  A ++Y +++                R  + P+++TY  L+ G C  
Sbjct: 398 ALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKA 457

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
             +  A E+   + + G   +HI +  L   + +  + D A+++
Sbjct: 458 HKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 173/395 (43%), Gaps = 24/395 (6%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  TYNA +       ++D    +   M+ +G   +R T     HALCK+G   DA+  
Sbjct: 38  PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADAL-- 95

Query: 246 LGEVLADDDGKATSDVITSTI--LMD-SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
             +++  +D K  + + T  I  LM+ SYF      +A++  + M   +   ++V Y  L
Sbjct: 96  --DMIEREDFKLDTVLCTHMISGLMEASYFD-----EAMSFLHRMRCNSCIPNVVTYRTL 148

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++GF     +         M+  G  P+   +N+L++  C +     A      ++  G 
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID-----GYGRC--- 414
            P  + Y   I  +C  G        LL + EK +  E    N +++      + RC   
Sbjct: 209 PPGYVVYNIFIGSIC--GQEKLPSPDLLDLAEK-IYGEMLAANCVLNKVNVANFARCLCG 265

Query: 415 -GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G    AF +   M+  G   +  T++ +I        +  AF L +EM + G+ PDV+T
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 325

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y +LI + C  G I  A  L++EM   G +P ++TYT LI  +     + +A ++F ++ 
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 385

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             G   + + +  L     +     KA +++ K +
Sbjct: 386 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 420



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 163/384 (42%), Gaps = 59/384 (15%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R TL  +   + A++  LC   K+  A  L   M+  G  P+ + ++ L++  CK G ++
Sbjct: 437 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 496

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A  V  +M++    P+  TY + I    +   LD A+ + S M  +   PN VT+  ++
Sbjct: 497 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 556

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LC+ G    A+K L   L ++ G  + +V+T T L+D   K G    +L L+  M +K
Sbjct: 557 DGLCRIGESEKALKLLS--LMEEKG-CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 613

Query: 291 NIQTDIVAYNVLINGFC----------LNGDISSAF------AYFC-------------- 320
               + V Y VLIN  C          L G++   +       Y C              
Sbjct: 614 GCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLG 673

Query: 321 ---QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK--TGVAPDQISYKTIIQG 375
              +M   G +P    Y  L++C  K G+L+ A   +  + +  + V  D   Y ++IQ 
Sbjct: 674 ILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQA 733

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG--------------YGRCGDLSNAF 421
           LC+   + +A      M  +  VPE  ++  +I G              YG C ++    
Sbjct: 734 LCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEVG--- 790

Query: 422 SIRDLMLSFGVSSNVFTFNALILA 445
               L+LS+     +FTF  +++ 
Sbjct: 791 ----LLLSYTTQIFLFTFVVIVVG 810


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 230/519 (44%), Gaps = 51/519 (9%)

Query: 87  FNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQ 146
           FN  +L+ KE       M + G     L  ++  +  +I   C  G++  A+    KM +
Sbjct: 208 FNEAELLFKE-------MGEKG-----LCANHITYSILIDSFCRRGEMDNAIGFLDKMTK 255

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
                 V  +N L+N  CK+G+   A +   EM +   +P   TY + I+GYC   E  K
Sbjct: 256 ASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHK 315

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A  +++ M   GI PN  T   ++  LC+  ++ +A++  GE+    + K     +T  +
Sbjct: 316 AFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEM---KERKIMPSEVTYNV 372

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +++ + ++G+  +A  L ++M  K    D   Y  LI+G C  G +S A  +   + K  
Sbjct: 373 MIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDH 432

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
              + + Y+ L++  CK+G+  +A     V+ + GVA D + Y  +I G     D     
Sbjct: 433 HKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALF 492

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--- 443
             L  M    + P+  I+  +ID + + G+L  AF + D+M+  G   NV T+ ALI   
Sbjct: 493 GLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGL 552

Query: 444 -------LAE-------------------------TRGGSIFDAFSLKKEMLLDGIFPDV 471
                   AE                         TRGG++  A  L   M L G     
Sbjct: 553 CKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM-LKGFLATT 611

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            +YN+LI   C LG I  A +L   M    I PD ITY+ +I   C R N++EA +++  
Sbjct: 612 VSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHT 671

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +   GL  D + +  L        E +KA ++  + + R
Sbjct: 672 MLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRR 710



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 209/465 (44%), Gaps = 33/465 (7%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
            + ++E     + ++I   C  G    A +   +MI KG  P V+T+  L++  C  G+ 
Sbjct: 254 TKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEW 313

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            KA  V  EM+    SPN  T+ A I+G CR N + +A+ LF  M    I P+ VT+N++
Sbjct: 314 HKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVM 373

Query: 230 VHALCKKGLLGDAVKFLGEVLA------------------------------DDDGKATS 259
           +   C+ G + +A   L E++                               DD  K   
Sbjct: 374 IEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHH 433

Query: 260 DV--ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
            +  +  + L+  Y K G    A++    M ++ +  D+V Y +LI+G     D  + F 
Sbjct: 434 KLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFG 493

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
              +M   G  PD + Y  +++   K G L EA   + ++   G  P+ ++Y  +I GLC
Sbjct: 494 LLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLC 553

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G + KA       L   V P    +   +D   R G++  A  +   ML  G  +   
Sbjct: 554 KAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTV 612

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           ++N LI    R G I +A  L   M  + I PD  TY+ +I   C   ++  A++L+  M
Sbjct: 613 SYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTM 672

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           L +G+ PD + Y+ L+ G C  G +++A E+  ++   G+  +H+
Sbjct: 673 LDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHV 717



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 206/451 (45%), Gaps = 51/451 (11%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           C L  + R   A++  L    +    L L   ++     PD+  ++ +V  LC++ D  K
Sbjct: 90  CNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNK 149

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A  +I  M   +   +   YN  I G C+   + +AL + + +   G+  N VT+     
Sbjct: 150 AKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY----- 204

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKA--TSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
                G   +A     E+L  + G+    ++ IT +IL+DS+ + G+   A+   + M +
Sbjct: 205 ----YGKFNEA-----ELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTK 255

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
            +I+  +  YN LING+C  G+ S+A  YF +M+ +G  P V+TY +L++  C +G+  +
Sbjct: 256 ASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHK 315

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   Y  ++  G++P+  ++  II GLC    + +A      M E+ ++P    +NV+I+
Sbjct: 316 AFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIE 375

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFT------------------------------- 438
           G+ R G++S AF + D M+  G   + +T                               
Sbjct: 376 GHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKL 435

Query: 439 ----FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
               ++AL+    + G   DA S  + M+  G+  D+  Y +LI  +           L 
Sbjct: 436 NNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLL 495

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            EM   G+ PD + YT +I  H   GN+KEA
Sbjct: 496 KEMHNHGLRPDAVIYTNMIDRHSKAGNLKEA 526



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 188/387 (48%), Gaps = 4/387 (1%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
            A+I  LC    +  A+ L  +M ++  +P  +T+N ++   C+ G++ +A H++ EM  
Sbjct: 336 TAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVG 395

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               P+  TY   I+G C V  + +A      +  +  + N + ++ LVH  CK+G   D
Sbjct: 396 KGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKD 455

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           AV     ++  + G A  D++   IL+D   +  D      L  +M    ++ D V Y  
Sbjct: 456 AVSACRVMV--ERGVAM-DLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTN 512

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +I+     G++  AF  +  M+  G LP+V+TY  L+N LCK G +D+A         + 
Sbjct: 513 MIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSD 572

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V P+ I+Y   +  L   G++ KA +   +ML K  +     +N++I G+ R G +  A 
Sbjct: 573 VTPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEAT 631

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   M    +  +  T++ +I  + +  ++ +A  L   ML  G+ PD   Y+ L+   
Sbjct: 632 KLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGC 691

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIIT 508
           C  G +  A +L DEM+RRG+  + +T
Sbjct: 692 CIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 192/406 (47%), Gaps = 12/406 (2%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R M     +P+V T + L+N L +         +  ++      P+   Y+A +   C +
Sbjct: 85  RLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCEL 144

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            + +KA  +   M  N  + + V +N+L+H LCK   + +A++    ++        ++V
Sbjct: 145 KDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKG---LEANV 201

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T       Y+  G   +A  L+ +M +K +  + + Y++LI+ FC  G++ +A  +  +
Sbjct: 202 VT-------YY--GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDK 252

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M K      V  YN+L+N  CK G    A +++  +   G+ P  ++Y ++I G C  G+
Sbjct: 253 MTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGE 312

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
             KA +    M  K + P  + +  II G  R   ++ A  +   M    +  +  T+N 
Sbjct: 313 WHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNV 372

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I    R G+I +AF L  EM+  G  PD +TY  LI   C++G +  A +  D++ +  
Sbjct: 373 MIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDH 432

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
              + + Y+ L+ G+C  G  K+A      +   G+A+D + + IL
Sbjct: 433 HKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAIL 478



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 39/286 (13%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++   C  G+   A+   R M+++G   D++ +  L++   +  D      +++EM 
Sbjct: 440 YSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMH 499

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+   Y   I  + +   L +A  L+  M + G  PN VT+  L++ LCK GL+ 
Sbjct: 500 NHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMD 559

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A     E L  D    T + IT    +D   + G+  +A+ L + M +  + T  V+YN
Sbjct: 560 KAELLSKETLVSD---VTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLAT-TVSYN 615

Query: 301 VLINGFCLNGDISSA-----------------------------------FAYFCQMLKR 325
           +LI GFC  G I  A                                      +  ML +
Sbjct: 616 ILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDK 675

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           G  PD + Y+ L++  C  G+L++A      + + G+  + ++ K+
Sbjct: 676 GLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVTPKS 721



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 9/240 (3%)

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            +P+V T + LLN L +  + ++    +  +    V PD   Y  +++ LC   D  KA+
Sbjct: 92  LMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAK 151

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E +  M          ++NV+I G  +   +  A  I++ ++  G+ +NV T+       
Sbjct: 152 EMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY------ 205

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G   +A  L KEM   G+  +  TY++LI + C  G +  A+   D+M +  I   +
Sbjct: 206 ---GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTV 262

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             Y  LI G+C  GN   A+  F ++   GL    + +  L   Y    E  KA  ++ +
Sbjct: 263 YPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNE 322


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 207/419 (49%), Gaps = 4/419 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  GK   +L+    ++ KG  PDV+    L+       +L+KA  V+ E+ E    P+ 
Sbjct: 73  CRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM-EILETYGDPDV 131

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            +YNA I+G+ + N++D A  +F  M + G  P+ VT+NI++ +LC +G L  A + + E
Sbjct: 132 YSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDE 191

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +L D        VIT TIL+++    G   +AL L++++  + ++ D+  YN +I G C 
Sbjct: 192 LLKDG---CKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G    A  +   +  RG  PDV++YN LL     + + ++       +  +G  P+ ++
Sbjct: 249 EGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVT 308

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           +  +I   C  G + +A   L  M EK + P+ + ++ +I  + + G L  A    + M+
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMV 368

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           S G   ++  +N ++    + G    A  + +++   G  P V  YN +  A  + G+  
Sbjct: 369 SDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKI 428

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            AL++  EM+R+GI PD ITY  LI   C  G + EA  +   ++        I F I+
Sbjct: 429 KALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIV 487



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 202/436 (46%), Gaps = 3/436 (0%)

Query: 102 KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           K MR    +    + D   + A+I       +I +A  +  +M  +G  PDV+T+N ++ 
Sbjct: 115 KAMRVMEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIG 174

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP 221
            LC  G LE A  V+ E+ +    P+  TY   I        +++AL LF  + + G+RP
Sbjct: 175 SLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRP 234

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           +  T+N ++  +CK+G+   A+ F+  + A        DV++  IL+ S+          
Sbjct: 235 DLYTYNAIIRGICKEGMEDRALDFVRHLSARG---CNPDVVSYNILLRSFLNKSRWEDGE 291

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            L  DM     + ++V +++LI+ FC  G +  A      M ++G  PD  +Y+ L++  
Sbjct: 292 RLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAF 351

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK+G+LD A  +   +   G  PD ++Y TI+  LC  G    A +    + E    P  
Sbjct: 352 CKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTV 411

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +N +      CG+   A  +   M+  G+  +  T+N+LI    R G + +A  L  +
Sbjct: 412 RAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVD 471

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           M      P V ++N+++   C    +   ++L   M+ +G  P+  +Y  LI+G    G 
Sbjct: 472 MEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGW 531

Query: 522 MKEAEEVFAKIQTLGL 537
             EA E+   +  LG+
Sbjct: 532 RAEAMELANSLYRLGV 547



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 171/346 (49%), Gaps = 5/346 (1%)

Query: 222 NRVTHNI-LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           NR  H + L++  C+ G   +++ FL  V++        DV+  T L+  +F + +  +A
Sbjct: 60  NRDAHLMKLLNRSCRAGKHNESLYFLESVVSKG---FKPDVVLCTKLIKGFFNSRNLKKA 116

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           + +  ++ +     D+ +YN +I+GF     I SA   F +M  RGF PDV+TYN ++  
Sbjct: 117 MRVM-EILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGS 175

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           LC +GKL+ A      L K G  P  I+Y  +I+   + G I +A E    ++ + + P+
Sbjct: 176 LCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPD 235

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
            + +N II G  + G    A      + + G + +V ++N L+ +        D   L K
Sbjct: 236 LYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMK 295

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           +M+L G  P+V T+++LI + C  G +  A+ + + M  +G+TPD  +Y  LI   C  G
Sbjct: 296 DMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEG 355

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            +  A E   K+ + G   D + +  +     +   +D A D+ +K
Sbjct: 356 RLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEK 401



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 160/321 (49%), Gaps = 3/321 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   + A+IR +C  G    AL   R +  +G  PDV+++N L+         E  +
Sbjct: 232 LRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGE 291

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++++M      PN  T++  I+ +CR   + +A+++   M   G+ P+  +++ L+ A 
Sbjct: 292 RLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAF 351

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+G L  A+++L ++++D       D++    ++ +  K G    AL ++  + +    
Sbjct: 352 CKEGRLDLAIEYLEKMVSDG---CLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCP 408

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             + AYN + +     G+   A     +M+++G  PD ITYN+L++CLC+ G +DEA   
Sbjct: 409 PTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGL 468

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +  T   P  IS+  ++ G+C    + +  E L++M+EK  +P    + ++I+G   
Sbjct: 469 LVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAY 528

Query: 414 CGDLSNAFSIRDLMLSFGVSS 434
            G  + A  + + +   GV S
Sbjct: 529 AGWRAEAMELANSLYRLGVIS 549


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 182/354 (51%), Gaps = 3/354 (0%)

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           +LE++     E+ +    PN   +N  + G+C+V  +  A  +F  +   G+RP  V+ N
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            L+   CK G + +  +  G + ++   +   DV T + L++   K G   +   L+++M
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESE---RVCPDVFTFSALINGLCKEGRLDEGSLLFDEM 238

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
             K +  + V + VLI+G C  G +  A   F  ML +G  PD++TYN L+N LCK G L
Sbjct: 239 CGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDL 298

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            EA      +S +G+ PD+I++ T+I G C +GD+  A E    M+E+ +  +   + V+
Sbjct: 299 KEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVL 358

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I G  R G + +A  +   MLS G   +  T+  ++    + G++   F L KEM  DG 
Sbjct: 359 ISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGH 418

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
            P V TYN L+   C  G +  A  L D ML  G+ P+ ITY  L++GH   G+
Sbjct: 419 VPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGS 472



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 146/293 (49%), Gaps = 3/293 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G +     L+  M  +   PDV T + L+N LCK G L++   +  EM   
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  T+   I G C+  ++D AL  F  M   G+RP+ VT+N L++ LCK G L +A
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + + E+ A        D IT T L+D   K GD   AL +   M ++ I+ D VA+ VL
Sbjct: 302 RRLVNEMSASG---LRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVL 358

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C +G +  A      ML  GF PD  TY  +++C CK+G +         +   G 
Sbjct: 359 ISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGH 418

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            P  ++Y  ++ GLC  G +  A+  L +ML   V P    +N++++G+ + G
Sbjct: 419 VPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHG 471



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 174/367 (47%), Gaps = 6/367 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++   C  G +G+A  +  ++ ++G  P V++ N L++  CK G +E+   +   M   
Sbjct: 147 VLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESE 206

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R  P+  T++A I G C+   LD+   LF  M   G+ PN VT  +L+   CK G +  A
Sbjct: 207 RVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLA 266

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K    +LA        D++T   L++   K GD  +A  L N+M    ++ D + +  L
Sbjct: 267 LKNFQMMLAQG---VRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTL 323

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C  GD+ SA     +M++ G   D + +  L++ LC+ G++ +A      +   G 
Sbjct: 324 IDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGF 383

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  +Y  ++   C  G++    + L  M     VP    +N +++G  + G + NA  
Sbjct: 384 KPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKM 443

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D ML+ GV+ N  T+N L+   ++ GS  D      E    G+  D  +Y  L+  S 
Sbjct: 444 LLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVDIFNSE---KGLVKDYASYTALVNESS 500

Query: 483 NLGHIHL 489
                HL
Sbjct: 501 KTSKDHL 507



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 179/372 (48%), Gaps = 8/372 (2%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +++  G  P+    N L++  CK+G +  A  V  E+ +    P   ++N  I+G C+  
Sbjct: 132 EVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAG 191

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDV 261
            +++   L   M +  + P+  T + L++ LCK+G L +      E+     GK    + 
Sbjct: 192 AVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMC----GKGLVPNG 247

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T T+L+D   K G    AL  +  M  + ++ D+V YN LING C  GD+  A     +
Sbjct: 248 VTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNE 307

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M   G  PD IT+ TL++  CK G ++ A      + + G+  D +++  +I GLC  G 
Sbjct: 308 MSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGR 367

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           +  A   L  ML     P+   + +++D + + G++   F +   M S G    V T+NA
Sbjct: 368 VHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNA 427

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           L+    + G + +A  L   ML  G+ P+  TYN+L+      G   + + +++    +G
Sbjct: 428 LMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGS-SVDVDIFNS--EKG 484

Query: 502 ITPDIITYTELI 513
           +  D  +YT L+
Sbjct: 485 LVKDYASYTALV 496



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 19/215 (8%)

Query: 94  LKENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           LKE    +  M  +G  P R T  T       +I   C  G + +AL ++R+M+++G   
Sbjct: 298 LKEARRLVNEMSASGLRPDRITFTT-------LIDGCCKYGDMESALEIKRRMVEEGIEL 350

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D +    L++ LC+ G +  A+ ++R+M      P+  TY   +  +C+   +     L 
Sbjct: 351 DDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLL 410

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M ++G  P  VT+N L++ LCK+G + +A   L  +L  + G A +D IT  IL++ +
Sbjct: 411 KEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAML--NVGVAPND-ITYNILLEGH 467

Query: 272 FKNGDKFQALALWNDMF--QKNIQTDIVAYNVLIN 304
            K+G          D+F  +K +  D  +Y  L+N
Sbjct: 468 SKHGSSVDV-----DIFNSEKGLVKDYASYTALVN 497


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 197/384 (51%), Gaps = 4/384 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GKIG AL L  KMI +G  PDV+T+  L+N LCK+G+   A  ++  M +    PN   Y
Sbjct: 112 GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY 171

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I   C+  ++ +A +LFS M   GI P+  T+N L+HALC           L E++ 
Sbjct: 172 NTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV- 230

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN-IQTDIVAYNVLINGFCLNG 310
             D K   DV++   ++D+  K G   +A  + + M Q+     ++++YN LING+C   
Sbjct: 231 --DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQ 288

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            I  A   F +M ++  +PD +TY+TL++ LC   +L +A   +  +      P+ ++Y+
Sbjct: 289 RIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR 348

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            ++  LC +  + +A   L ++   ++ P+  + N+ IDG  R G+L  A  +   + S 
Sbjct: 349 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 408

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+  +V+T++ +I    R G + +A  L +EM  +G   +   YN +            A
Sbjct: 409 GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRA 468

Query: 491 LQLYDEMLRRGITPDIITYTELIK 514
           +QL  EM+ RG + D  T T  +K
Sbjct: 469 IQLLQEMVARGFSADASTMTLFVK 492



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 209/431 (48%), Gaps = 6/431 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M++    P  +  N L+  + K+        +  +M      PN  T +  I  +C +N
Sbjct: 51  RMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLN 110

Query: 203 --ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
             ++ +ALHLF  M   G RP+ VT+  L++ LCK G    A++ LG ++  +      +
Sbjct: 111 RGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN---CQPN 167

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           V     ++DS  K+    +A  L+++M  K I  DI  YN LI+  C   +         
Sbjct: 168 VFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLN 227

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY-GVLSKTGVAPDQISYKTIIQGLCIH 379
           +M+    +PDV+++NT+++ LCK+GK+ EA      ++ + G  P+ ISY T+I G C  
Sbjct: 228 EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKI 287

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
             I KA      M  + ++P+   ++ +I G      L +A ++   M++     N+ T+
Sbjct: 288 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 347

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
             L+    +   + +A +L K +    + PD+   N+ I   C  G +  A  L+  +  
Sbjct: 348 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 407

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
           +G+ PD+ TY+ +I G C RG + EA ++F ++   G  ++   +  + + + R  E+ +
Sbjct: 408 KGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSR 467

Query: 560 ARDIHQKWLLR 570
           A  + Q+ + R
Sbjct: 468 AIQLLQEMVAR 478



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 98/185 (52%), Gaps = 3/185 (1%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L  D   +  +I  LC   ++  A+ L  +M+    +P+++T+  L++ LCK   L 
Sbjct: 302 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLA 361

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A  +++ +      P+    N  I G CR  EL+ A  LFS +++ G++P+  T++I++
Sbjct: 362 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 421

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           + LC++GLL +A K   E+  D++G   +  I +TI    + +N +  +A+ L  +M  +
Sbjct: 422 NGLCRRGLLDEASKLFREM--DENGCTLNGCIYNTI-TRGFLRNNETSRAIQLLQEMVAR 478

Query: 291 NIQTD 295
               D
Sbjct: 479 GFSAD 483



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 60/125 (48%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D + +   I  +C  G++  A  L   +  KG  PDV T++ ++N LC+ G L++A 
Sbjct: 375 LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEAS 434

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + REM E   + N   YN    G+ R NE  +A+ L   M   G   +  T  + V  L
Sbjct: 435 KLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 494

Query: 234 CKKGL 238
              GL
Sbjct: 495 SDDGL 499


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 195/416 (46%), Gaps = 38/416 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR LC  G+   AL +  +M+++  VPDV+T+  L+   CK    ++A  ++ EM +  
Sbjct: 166 LIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG 225

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  TYN  + G C+   +D A+     + + G  PN V++NI++  LC      DA 
Sbjct: 226 CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 285

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + +GE                                      M QK    ++V +N+LI
Sbjct: 286 ELMGE--------------------------------------MGQKGCPPNVVTFNMLI 307

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G +  A     Q+ K G  P+ ++YN LL+  CKQ K+D+A  F  ++   G  
Sbjct: 308 SFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 367

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +SY T++  LC  G++  A E L  + +K   P    +N +IDG  + G    A  +
Sbjct: 368 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 427

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M+S G+  ++ T++ +     R   I DA     ++   GI P+   YN +I   C 
Sbjct: 428 LNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 487

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
               H A+ L+  M+  G  P+  TYT LI+G    G +KEA ++  ++ + G  I
Sbjct: 488 RRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGEEI 543



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 208/439 (47%), Gaps = 15/439 (3%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           +R L   G++  AL    +++     PD  T   L+ +L   G   +A  V+        
Sbjct: 74  LRSLVRRGELDEAL----RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACG---- 125

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+   YNA + GYC   ++D A       A   +  +  T + L+  LC +G   +A+ 
Sbjct: 126 -PDVMAYNAMMAGYCGAGQVDAARRW---CAERAVERDAYTCDTLIRGLCGRGRTANALA 181

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L E+L     +   DV+T TIL+++  K     QA+ L ++M  K    DIV YNV++N
Sbjct: 182 VLDEMLRR---RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 238

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G +  A  +   +   G  P+ ++YN +L  LC   + ++A    G + + G  P
Sbjct: 239 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 298

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           + +++  +I  LC  G +  A E L  + +    P    +N ++  + +   +  A +  
Sbjct: 299 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFL 358

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           DLM+S G   ++ ++N L+ A  R G +  A  L  ++   G  P + +YN +I      
Sbjct: 359 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 418

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G    AL+L +EM+ +G+ PDIITY+ +  G C    +++A   F K+Q +G+  + + +
Sbjct: 419 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY 478

Query: 545 RILKKRYRRMKESDKARDI 563
             +     + +E+  A D+
Sbjct: 479 NAIILGLCKRRETHSAIDL 497


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 201/434 (46%), Gaps = 3/434 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   +  VI  LC       A  + ++MI  G  P+  T+N L++    IG  ++  
Sbjct: 230 IPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVV 289

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EMS     P+C TY + +   C+     +A   F +M   GI+P   T+ IL+H  
Sbjct: 290 QMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGY 349

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
             KG L +   FL  ++   +   + D     I   +Y K G   +A+ ++N M Q  + 
Sbjct: 350 ATKGALSEMHSFLDLMV---ENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLS 406

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++V Y  LI+  C  G +  A   F QM+  G  P+++ +N+L+  LC   K + A   
Sbjct: 407 PNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEEL 466

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+ P+ + + T+I  LC  G +++ R  +  M    V P+   +  +I GY  
Sbjct: 467 VYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCL 526

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G    A  + D M+S G+S    T+N L+        I DA+ L +EML  G+ P V T
Sbjct: 527 TGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVT 586

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN ++           A +LY  M+  G   DI TY  ++ G C    + EA ++F  + 
Sbjct: 587 YNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLC 646

Query: 534 TLGLAIDHIPFRIL 547
           + GL ++ I F I+
Sbjct: 647 SKGLQLNIITFTIM 660



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 222/463 (47%), Gaps = 11/463 (2%)

Query: 114 LETDYRR-HVAV---IRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           L+T +R  H+A+   ++ LC G ++G A+  L ++M + G +PD +++  L+  LC    
Sbjct: 117 LKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKR 176

Query: 169 LEKADHVIREMSE---MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
            E+A  ++  M++    R  PN  +Y+  I G+    ++DK  +LF  M + GI P+ VT
Sbjct: 177 AEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVT 236

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
           +  ++  LCK  L   A     +++  D+G   ++  T   L+  Y   G   + + +  
Sbjct: 237 YTTVIDGLCKAQLFDRAEGVFQQMI--DNGFKPNNY-TYNCLIHGYLSIGKWKEVVQMLE 293

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
           +M  + ++ D   Y  L+N  C NG    A  +F  M+++G  P V TY  L++    +G
Sbjct: 294 EMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKG 353

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
            L E   F  ++ + G++PD   +          G I KA +    M +  + P    + 
Sbjct: 354 ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYG 413

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            +ID   + G + +A    + M++ GV+ N+  FN+L+           A  L  EML  
Sbjct: 414 ALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQ 473

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           GI P+   +N LI   CN+G +    +L D M   G+ PD  +YT LI G+C  G   EA
Sbjct: 474 GICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEA 533

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           E+VF  + ++GL+   + +  L   Y      D A  + ++ L
Sbjct: 534 EKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREML 576



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 195/401 (48%), Gaps = 3/401 (0%)

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
             P++ T++ L+   C++G LE        + +     +    N  + G C    + +A+
Sbjct: 86  VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAM 145

Query: 209 H-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK-ATSDVITSTI 266
             L   M   G  P+ V++ IL+  LC +    +A++ L  ++ADD G+    +V++ +I
Sbjct: 146 DVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELL-HMMADDHGRRCPPNVVSYSI 204

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +++ +F  G   +   L+ +M  + I  D+V Y  +I+G C       A   F QM+  G
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG 264

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           F P+  TYN L++     GK  E       +S  G+ PD  +Y +++  LC +G   +AR
Sbjct: 265 FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREAR 324

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
            F  SM+ K + P+   + ++I GY   G LS   S  DLM+  G+S +   FN    A 
Sbjct: 325 FFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 384

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G I  A  +  +M   G+ P+V  Y  LI A C LG +  A   +++M+  G+TP+I
Sbjct: 385 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 444

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + +  L+ G C     + AEE+  ++   G+  + + F  L
Sbjct: 445 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTL 485



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/510 (25%), Positives = 225/510 (44%), Gaps = 37/510 (7%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           KE +  L+ M   G     L+ D   + +++  LC  G+   A +    MI+KG  P V 
Sbjct: 286 KEVVQMLEEMSARG-----LKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVS 340

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  L++     G L +    +  M E   SP+   +N F + Y +   +DKA+ +F+ M
Sbjct: 341 TYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM 400

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDA-VKF-------------------LGEVLADDD 254
             +G+ PN V +  L+ ALCK G + DA VKF                    G    D  
Sbjct: 401 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW 460

Query: 255 GKATS---DVITSTILMDSYFKN---------GDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +A     +++   I  ++ F N         G   +   L + M    ++ D  +Y  L
Sbjct: 461 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPL 520

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G+CL G    A   F  M+  G  P  +TYNTLL+  C   ++D+A   +  + + GV
Sbjct: 521 ISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGV 580

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  ++Y TI+ GL       +A+E  L+M+      + + +N+I++G  +   +  AF 
Sbjct: 581 TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFK 640

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   + S G+  N+ TF  +I A  +GG   DA  L   +  +G+ P+V TY L+     
Sbjct: 641 MFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLI 700

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +     L+  M + G  P+      L++    RG++  A    +K+     +++  
Sbjct: 701 EEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAS 760

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLRNK 572
              +L   +   +    A+ + +K+   N+
Sbjct: 761 TTSLLMSIFTSDEYQHHAKSLPEKYHFLNE 790



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 162/371 (43%), Gaps = 9/371 (2%)

Query: 204 LDKALHLFSTMANNGIRPNRV-THNILVHALCKKGLLGD---AVKFLGEVLADDDGKATS 259
           LD AL LF  + ++  RP  V   N L+ A+ +         AV     ++ +   K   
Sbjct: 30  LDDALKLFDELLHHA-RPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAP 88

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           ++ T +IL+  + + G      A +  + +   + D +A N L+ G C    +  A    
Sbjct: 89  NLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVL 148

Query: 320 CQ-MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG---VAPDQISYKTIIQG 375
            Q M + G +PD ++Y  LL  LC + + +EA     +++        P+ +SY  +I G
Sbjct: 149 LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVING 208

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
               G + K     L M+++ + P+   +  +IDG  +      A  +   M+  G   N
Sbjct: 209 FFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPN 268

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
            +T+N LI      G   +   + +EM   G+ PD +TY  L+   C  G    A   +D
Sbjct: 269 NYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFD 328

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
            M+R+GI P + TY  LI G+  +G + E       +   GL+ DH  F I    Y +  
Sbjct: 329 SMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCG 388

Query: 556 ESDKARDIHQK 566
             DKA DI  K
Sbjct: 389 MIDKAMDIFNK 399



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 4/176 (2%)

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           V P    ++++I  + R G L + F+   L+L  G   +    N L+     G  + +A 
Sbjct: 86  VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAM 145

Query: 457 S-LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR---RGITPDIITYTEL 512
             L + M   G  PD  +Y +L+   CN      AL+L   M     R   P++++Y+ +
Sbjct: 146 DVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIV 205

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           I G    G + +   +F ++   G+  D + +  +     + +  D+A  + Q+ +
Sbjct: 206 INGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMI 261


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 214/469 (45%), Gaps = 68/469 (14%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK   AL L ++ + +G   +V+T N ++N LCKIG + +A+ ++  M E+R  P+  T
Sbjct: 477 AGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLT 536

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y     GYC++ +L  A HL + M + G  P+    N                       
Sbjct: 537 YRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFN----------------------- 573

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                      IT   +   + K  D      + ++M  + +  ++V Y  LI G+C  G
Sbjct: 574 ---------SFITGHFIAKQWHKVND------IHSEMSARGLSPNLVTYGALIAGWCKEG 618

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA-------------------- 350
           ++  A   + +M+  G  P+V   + L++C  K+GK+DEA                    
Sbjct: 619 NLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSIST 678

Query: 351 ------SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
                 SH    ++        + +  II GLC  G I  A+    S+  K  +P+   +
Sbjct: 679 IEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTY 738

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           + +I G    G +  AFS+RD+MLS G++ N+ T+N+LI    + G +  A +L  ++  
Sbjct: 739 SSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQS 798

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            GI P+  TYN LI   C  G    A +L  +M+  GI P +ITY+ LI G C +G M+E
Sbjct: 799 KGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEE 858

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRR---MKESDKARD-IHQKWLL 569
           A ++  ++    +  ++I +  L   Y +   M+E  K  D +H + LL
Sbjct: 859 AIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLL 907



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 205/415 (49%), Gaps = 14/415 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC  G++  A  L  +M +    PD LT+  L +  CK+G L  A H++ +M  + 
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+   +N+FITG+    +  K   + S M+  G+ PN VT+  L+   CK+G L +A 
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEAC 624

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E++   +     +V   + LM  ++K G   +A    N + QK +  D      +I
Sbjct: 625 NLYFEMV---NNGMNPNVFICSALMSCFYKEGKVDEA----NLVLQKLVNID------MI 671

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDV-ITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            G  ++       ++    +  G      + +N ++  LCK G++ +A   +  L     
Sbjct: 672 PGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRF 731

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  +Y ++I G    G I +A      ML   + P    +N +I G  + G LS A +
Sbjct: 732 LPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVN 791

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + + S G+S N  T+N LI    + G   +AF LK++M+ +GI P V TY++LI   C
Sbjct: 792 LFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLC 851

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
             G++  A++L D+M+   + P+ ITY  LI G+   GNM+E  +++ ++   GL
Sbjct: 852 TQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGL 906



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/527 (25%), Positives = 233/527 (44%), Gaps = 68/527 (12%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           +K M++TG +      D   +  +I   C  G++  A  +R +M   G   ++  +N ++
Sbjct: 311 VKEMKETGDI----VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMI 366

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           N LCK+G +E+   V++EM ++   P+  +YN  I GYCR   + KA  +   M  NG+ 
Sbjct: 367 NGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLA 426

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
              +T+N L+   C    + DA++     L    G A +++  ST L+D  FK G   QA
Sbjct: 427 ATTLTYNTLLKGFCSLHAIDDALRLW--FLMLKRGVAPNEISCST-LLDGLFKAGKTEQA 483

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           L LW +   + +  +++ +N +ING C  G ++ A     +M +    PD +TY TL + 
Sbjct: 484 LNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDG 543

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
            CK G+L  A+H    +   G AP    + + I G  I     K  +    M  + + P 
Sbjct: 544 YCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPN 603

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +  +I G+ + G+L  A ++   M++ G++ NVF  +AL+    + G + +A  + +
Sbjct: 604 LVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQ 663

Query: 461 EMLLDGIFPDV--------------------------FTYNLLIGASCNLGHIHLALQLY 494
           +++   + P                              +N++I   C  G I  A  L+
Sbjct: 664 KLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLF 723

Query: 495 -----------------------------------DEMLRRGITPDIITYTELIKGHCAR 519
                                              D ML  G+TP+IITY  LI G C  
Sbjct: 724 ESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKS 783

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           G +  A  +F K+Q+ G++ + I +  L   Y +  ++ +A  + QK
Sbjct: 784 GKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQK 830



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 203/441 (46%), Gaps = 4/441 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G++ +AL +   M + G  P + + N L+N+L + GD   A  V  +M      P+  T
Sbjct: 161 AGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFT 220

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
                  YCR   + +A+     M   G+  N V ++ ++   C  G   DA + L  + 
Sbjct: 221 VAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESL- 279

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLN 309
                  + +V+T T+L+  Y K+G   +A  +  +M +  +I  D VAY ++ING+C  
Sbjct: 280 --QRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQR 337

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G +  A     +M   G   ++  YNT++N LCK G+++E       +   G+ PD+ SY
Sbjct: 338 GRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSY 397

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            T+I G C  G + KA E    M+   +      +N ++ G+     + +A  +  LML 
Sbjct: 398 NTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLK 457

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            GV+ N  + + L+    + G    A +L KE L  G+  +V T+N +I   C +G +  
Sbjct: 458 RGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAE 517

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A +L D M      PD +TY  L  G+C  G +  A  +  K++ LG A     F     
Sbjct: 518 AEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFIT 577

Query: 550 RYRRMKESDKARDIHQKWLLR 570
            +   K+  K  DIH +   R
Sbjct: 578 GHFIAKQWHKVNDIHSEMSAR 598



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 132/531 (24%), Positives = 213/531 (40%), Gaps = 84/531 (15%)

Query: 89  ALDLILKENLDR------LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRR 142
           + DL+L+ + D       L      G V C      R    ++  L   G  G A  +  
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGC--RPSLRSCNRLLNKLVQSGDPGMAAMVYG 207

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M   G +PD  T   +    C+ G + +A   + EM  M    N   Y+A +  YC + 
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
             + A  +  ++   G+ PN VT+ +LV   CK G + +A + + E+   + G    D +
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM--KETGDIVVDEV 325

Query: 263 TSTILMDSYFKNGDKFQALALWNDM---------------------------FQKNIQ-- 293
              ++++ Y + G    A  + N+M                            QK +Q  
Sbjct: 326 AYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM 385

Query: 294 ------TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
                  D  +YN LI+G+C  G +  AF     M++ G     +TYNTLL   C    +
Sbjct: 386 EDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAI 445

Query: 348 DEASHFYGVLSKTGVAPDQIS-----------------------------------YKTI 372
           D+A   + ++ K GVAP++IS                                   + T+
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTV 505

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I GLC  G + +A E L  M E    P+   +  + DGY + G L  A  + + M   G 
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           + +V  FN+ I              +  EM   G+ P++ TY  LI   C  G++H A  
Sbjct: 566 APSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACN 625

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           LY EM+  G+ P++   + L+      G + EA  V  K+    + ID IP
Sbjct: 626 LYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKL----VNIDMIP 672



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 163/367 (44%), Gaps = 14/367 (3%)

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV----------LADDD 254
           D ALHLF    +   RP+ V+H  L+H L +     DA   L  +          LA+  
Sbjct: 85  DAALHLFRLAPS---RPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVY 141

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
              T   ++  +L+ ++   G    AL +++ M +   +  + + N L+N    +GD   
Sbjct: 142 RDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGM 201

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A   + QM   G LPD  T   +    C+ G++ +A  F   +   G+  + ++Y  ++ 
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG-VS 433
             C  G    AR  L S+  K + P    + +++ GY + G +  A  +   M   G + 
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            +   +  +I    + G + DA  ++ EM   GI  ++F YN +I   C LG +    ++
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
             EM   G+ PD  +Y  LI G+C  G+M++A E+   +   GLA   + +  L K +  
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS 441

Query: 554 MKESDKA 560
           +   D A
Sbjct: 442 LHAIDDA 448



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 146/323 (45%), Gaps = 35/323 (10%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  G +  A  L  +M+  G  P+V   + L++   K G +++A+ V++++  +
Sbjct: 609 ALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNI 668

Query: 183 RPSPNCA--------------------------TYNAFITGYCRVNELDKALHLFSTMAN 216
              P C+                           +N  I G C+   +  A  LF ++ N
Sbjct: 669 DMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRN 728

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
               P+  T++ L+H     G + +A      +L+      T ++IT   L+    K+G 
Sbjct: 729 KRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLS---AGLTPNIITYNSLIYGLCKSGK 785

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A+ L+N +  K I  + + YN LI+ +C  G  + AF    +M++ G  P VITY+ 
Sbjct: 786 LSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSI 845

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L+  LC QG ++EA      + +  V P+ I+Y T+I G    G++ +  +    M  + 
Sbjct: 846 LIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRG 905

Query: 397 VVPEPHIWN------VIIDGYGR 413
           ++P   I N      V+++ + R
Sbjct: 906 LLPTNWIGNWKRSDPVVVNNWNR 928



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 96/200 (48%), Gaps = 4/200 (2%)

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           +S+  +++     G +  A      M +    P     N +++   + GD   A  +   
Sbjct: 149 VSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQ 208

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M   GV  + FT   +  A  R G +  A    +EM   G+  ++  Y+ ++   C +G 
Sbjct: 209 MRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGW 268

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG-LAIDHIPFR 545
              A ++ + + R+G++P+++TYT L+KG+C  G M+EAE V  +++  G + +D + + 
Sbjct: 269 TEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYG 328

Query: 546 ILKKRY---RRMKESDKARD 562
           ++   Y    RM ++ + R+
Sbjct: 329 MMINGYCQRGRMDDATRVRN 348


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 221/451 (49%), Gaps = 5/451 (1%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           +LDR + +  +G V+  L      +  +I  LC  G + + + L R+M ++G   +  T 
Sbjct: 423 SLDRARGLL-SGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 481

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
             L+N  CK   +++A  +  +M +    PN  T+N  I GYC V  + KA  L+  M  
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 541

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G++P+  T+  L+  LC    +  A +F+ ++   ++  A  +  + T L+  +F+ G 
Sbjct: 542 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADL---ENSYAVLNNFSLTALLYGFFREGR 598

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +   LW++M  + ++ D+V++ +++       D   +   F +M ++G  PD I Y  
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 658

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           +++ L K+  + +A + +  +   G +P+ +++  +I  LC  G +  A      ML  +
Sbjct: 659 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           V+P    +N  +D +   GD+  A  +   ML  G  +++ +FN LI    + G I +A 
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAI 777

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L  ++   G  PD  +Y+ +I   C +G I+ A +L++EML +G+ PD++ Y   I+  
Sbjct: 778 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 837

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
              G   +A  ++  +   G+  +   +R L
Sbjct: 838 NVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 219/434 (50%), Gaps = 8/434 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E  YR    ++   C   ++  AL +   MI+ G VP     +++++EL K   +E+A  
Sbjct: 268 EVTYR---TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  ++ ++   PN   YNA I   C+    D A  LF  MA  G+ PN VT+ IL+HALC
Sbjct: 325 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G++ DA+  L + + D   K T  V     L++ Y K G   +A  L + M ++ +  
Sbjct: 385 KRGMIEDAL-CLFDKMRDKGIKVT--VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTP 441

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
              +Y+ LI G C NGD+SS      +M +RG   +  T+  L+N  CK  K+DEA+  +
Sbjct: 442 TAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +  + V P+++++  +I+G C+ G+I KA +    M+E  + P+ + +  +I G    
Sbjct: 502 DKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLT 561

Query: 415 GDLSNAFS-IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             +S A   + DL  S+ V +N F+  AL+    R G   + + L  EM + G+  D+ +
Sbjct: 562 SGVSKANEFVADLENSYAVLNN-FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVS 620

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           + +++ A+        +  L+ EM  +G+ PD I YT +I       NM +A   + ++ 
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 680

Query: 534 TLGLAIDHIPFRIL 547
             G + + +   +L
Sbjct: 681 VDGYSPNTVTHTVL 694



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 218/476 (45%), Gaps = 10/476 (2%)

Query: 96  ENLDRL-KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           ++ DRL K M   G     LE +   +  +I  LC  G I  AL L  KM  KG    V 
Sbjct: 355 DDADRLFKEMAGRG-----LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
            +N L+N  CK G L++A  ++  M +   +P  A+Y+  I G CR  +L   + L   M
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 469

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
           A  GI  N  T   L++  CK   + +A +   +++   D     + +T  ++++ Y   
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI---DSNVIPNEVTFNVMIEGYCLV 526

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G+  +A  L++ M +  ++ D   Y  LI+G CL   +S A  +   +     + +  + 
Sbjct: 527 GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSL 586

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
             LL    ++G+  E  H +  ++  GV  D +S+  I+       D  K+      M E
Sbjct: 587 TALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 646

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           + V P+   +  +ID   +  ++  A +  D M+  G S N  T   LI    + G +  
Sbjct: 647 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGS 706

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L KEML   + P+ FTYN  +      G +  A  L+  ML +G    I+++  LIK
Sbjct: 707 AELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIK 765

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           G C  G ++EA ++ +KI   G + D I +  +     +M + +KA ++  + L +
Sbjct: 766 GLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 223/511 (43%), Gaps = 72/511 (14%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC   +   A  L ++M  +G  P+ +T+  L++ LCK G +E A  +  +M + 
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
                   YN+ I GYC+   LD+A  L S M   G+ P   +++ L+  LC+ G L   
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSC 462

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++   E+   + G A ++  T T L++ + K+    +A  L++ M   N+  + V +NV+
Sbjct: 463 MELHREMA--ERGIAWNNY-TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVM 519

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC-------------------- 342
           I G+CL G+I  AF  + QM++ G  PD  TY +L++ LC                    
Sbjct: 520 IEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYA 579

Query: 343 ---------------KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
                          ++G+  E  H +  ++  GV  D +S+  I+       D  K+  
Sbjct: 580 VLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCV 639

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M E+ V P+   +  +ID   +  ++  A +  D M+  G S N  T   LI    
Sbjct: 640 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLC 699

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYN-------------------------------- 475
           + G +  A  L KEML   + P+ FTYN                                
Sbjct: 700 KSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVS 759

Query: 476 --LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
             +LI   C  G I  A+ L  ++   G +PD I+Y+ +I   C  G++ +A E++ ++ 
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
             GL  D + + I  +      ESDKA  I+
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIY 850



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 188/397 (47%), Gaps = 15/397 (3%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM+Q G   D   +   +   C+  +L+ A  ++  M       +   YN  + G C+  
Sbjct: 188 KMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNM 247

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF------LGEVLADDDGK 256
            + +A+ + + M N G+  + VT+  LV+  C+   L  A++       LG V ++ +  
Sbjct: 248 RVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCS 307

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D +    L++  F    K   L +  ++F         AYN LI+  C N     A 
Sbjct: 308 FMIDELRKKELVEEAFSLACKLGDLGMVPNVF---------AYNALIDKLCKNERFDDAD 358

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F +M  RG  P+ +TY  L++ LCK+G +++A   +  +   G+      Y ++I G 
Sbjct: 359 RLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 418

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G + +AR  L  M+++ + P    ++ +I G  R GDLS+   +   M   G++ N 
Sbjct: 419 CKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN 478

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           +TF ALI    +   + +A  L  +M+   + P+  T+N++I   C +G+I  A QLYD+
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 538

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           M+  G+ PD  TY  LI G C    + +A E  A ++
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 198/441 (44%), Gaps = 5/441 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A IR  C    +  A  L  +M  +G     + +N L+  LCK   +++A  V   M 
Sbjct: 201 YTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMV 260

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            +  + +  TY   + G+CR+ EL+ AL +   M   G  P+    + ++  L KK L+ 
Sbjct: 261 NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVE 320

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A     ++    D     +V     L+D   KN     A  L+ +M  + ++ + V Y 
Sbjct: 321 EAFSLACKL---GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 377

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI+  C  G I  A   F +M  +G    V  YN+L+N  CKQG LD A      + K 
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P   SY  +I GLC +GD+    E    M E+ +    + +  +I+G+ +   +  A
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + D M+   V  N  TFN +I      G+I  AF L  +M+  G+ PD +TY  LI  
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    +  A +   ++       +  + T L+ G    G   E   ++ ++   G+ +D
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 617

Query: 541 HIPFRILKKRYRRMKESDKAR 561
            + F I+   Y  +K+ DK +
Sbjct: 618 LVSFTIIV--YAALKQHDKEK 636



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 195/403 (48%), Gaps = 3/403 (0%)

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           +  G   +  T + ++  L KI     A  +  +M +     +   Y A I  YC    L
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D A  L   M + G++ + V +N+L++ LCK   + +AV+    ++   +   T+D +T 
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMV---NIGVTADEVTY 271

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
             L+  + +  +   AL + +DM +          + +I+       +  AF+  C++  
Sbjct: 272 RTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGD 331

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G +P+V  YN L++ LCK  + D+A   +  ++  G+ P++++Y  +I  LC  G I  
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A      M +K +    + +N +I+GY + G L  A  +   M+  G++    +++ LI 
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 451

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              R G +     L +EM   GI  + +T+  LI   C    +  A +L+D+M+   + P
Sbjct: 452 GLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + +T+  +I+G+C  GN+++A +++ ++  +GL  D+  +R L
Sbjct: 512 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 155/354 (43%), Gaps = 37/354 (10%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   CL G I  A  L  +M++ G  PD  T+  L++ LC    + KA+  + ++    
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 578

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  +  A + G+ R     +  HL+  MA  G++ + V+  I+V+A  K+     + 
Sbjct: 579 AVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 638

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+    +     D I  T ++D+  K  +  QAL  W+ M       + V + VLI
Sbjct: 639 VLFREM---KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLI 695

Query: 304 NGFCLNGDISSA----------------FAYFC------------------QMLKRGFLP 329
           N  C +G + SA                F Y C                    + +G L 
Sbjct: 696 NNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA 755

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
            ++++N L+  LCK GK+ EA      ++++G +PD ISY TII  LC  GDI KA E  
Sbjct: 756 SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELW 815

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
             ML K + P+   +N+ I      G+   A  I   M+  GV  N  T+ AL+
Sbjct: 816 NEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 869



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 136/279 (48%), Gaps = 4/279 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+      L  +M  +G   D+++   +V    K  D EK+  + REM E    P+   Y
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 656

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I    +   + +AL+ +  M  +G  PN VTH +L++ LCK G LG A     E+LA
Sbjct: 657 TCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 716

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
              G    +  T    +D +   GD  +A  L + M Q ++ + IV++N+LI G C  G 
Sbjct: 717 ---GNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLAS-IVSFNILIKGLCKAGK 772

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I  A     ++ + GF PD I+Y+T+++ LCK G +++A   +  +   G+ PD ++Y  
Sbjct: 773 IQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNI 832

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            I+   +HG+  KA     +M+   V P    +  ++ G
Sbjct: 833 FIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 139/334 (41%), Gaps = 39/334 (11%)

Query: 277 KFQALALWNDMFQKNIQT----DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K +  AL  D+F K +Q+    D   Y   I  +C + ++  A     +M   G     +
Sbjct: 175 KIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAV 234

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            YN L+  LCK  ++ EA     V+   GV  D+++Y+T++ G C   ++  A      M
Sbjct: 235 PYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDM 294

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--------- 443
           +    VP     + +ID   +   +  AFS+   +   G+  NVF +NALI         
Sbjct: 295 IRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERF 354

Query: 444 ------LAETRG--------------------GSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
                   E  G                    G I DA  L  +M   GI   V+ YN L
Sbjct: 355 DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSL 414

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I   C  G +  A  L   M++ G+TP   +Y+ LI G C  G++    E+  ++   G+
Sbjct: 415 INGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGI 474

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           A ++  F  L   + + K+ D+A  +  K +  N
Sbjct: 475 AWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 67/111 (60%), Gaps = 2/111 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC  GKI  A+ L  K+ + G  PD ++++ +++ELCK+GD+ KA  +  EM    
Sbjct: 763 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822

Query: 184 PSPNCATYNAFITGYCRVN-ELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             P+   YN FI  +C V+ E DKAL +++ M  +G++PN  T+  L+  +
Sbjct: 823 LKPDVVAYNIFIR-WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 63/138 (45%)

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
           L LS G++ N +T + ++ +  +      A  L  +ML  G+  D + Y   I A C   
Sbjct: 153 LSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESR 212

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           ++  A  L   M   G+    + Y  L+ G C    ++EA EV   +  +G+  D + +R
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 272

Query: 546 ILKKRYRRMKESDKARDI 563
            L   + RM+E + A  I
Sbjct: 273 TLVYGFCRMEELEMALRI 290


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 217/469 (46%), Gaps = 65/469 (13%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM--- 179
            +I   C  G+   A  L  +M + G  PDV+T N  ++ LC  G + +A  + R+M   
Sbjct: 226 TLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQID 285

Query: 180 SEMR-PSPNCATYNAFITGYCRVNELDKALHLFSTMANNG-------------------- 218
            E+  P PN  T+N  + G+C+   L++A  L  +M  NG                    
Sbjct: 286 EELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGK 345

Query: 219 ---------------IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
                          I PN  + N ++  LCK GL+ DA   +G +++   G    D +T
Sbjct: 346 LLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIG---PDTVT 402

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            + L+      G   +A  + ++M ++    +    N+L++     G I  A     +M 
Sbjct: 403 YSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMN 462

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEA-------------------SHFYGVLSKTGVA- 363
           +R +  D +T N +++ LCK GKLDEA                   + F G++  +    
Sbjct: 463 ERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGK 522

Query: 364 ---PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
              PD I+Y  II GLC  G + +AR+  + M+ KS+ P+  I++  I  + + G +S+A
Sbjct: 523 KCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSA 582

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           F +   M   G + ++ T+N+LIL       IF+ + L  +M   GI P++ TYN +I  
Sbjct: 583 FRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISC 642

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            C  G I  A  L DEML++GI+P+I ++  LIK  C   +    +EVF
Sbjct: 643 LCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVF 691



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/463 (23%), Positives = 199/463 (42%), Gaps = 59/463 (12%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K+ +  WL + M+  G  P+  T N L+  LC  G  E A  V  +M      PN  ++ 
Sbjct: 131 KVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFG 190

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK---------------- 236
             + GYCR     +AL L   M + G++PN+V +N L+ + C++                
Sbjct: 191 ILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMRED 250

Query: 237 GLLGDAVKF---------LGEVLA-----------DDDGKATSDVITSTILMDSYFKNGD 276
           GL  D V F          G++L            ++ G    ++ T  ++++ + K G 
Sbjct: 251 GLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGM 310

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A  L   M +     ++ +YN+ + G   NG +  A     +M+ +G  P++ ++NT
Sbjct: 311 LEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNT 370

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           +++ LCK G + +A    G++  +G+ PD ++Y T++ G C  G ++KA   L  M+ + 
Sbjct: 371 VMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRG 430

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P  +  N+++    + G +  A  +   M       +  T N +I    + G + +A 
Sbjct: 431 CSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAV 490

Query: 457 SLKKEMLLDG-----------------------IFPDVFTYNLLIGASCNLGHIHLALQL 493
            + + M + G                         PD+ TY+++I   C  G +  A + 
Sbjct: 491 EIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKK 550

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           + EM+ + + PD I Y   I   C  G +  A  V   ++  G
Sbjct: 551 FIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRG 593



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 179/382 (46%), Gaps = 7/382 (1%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P    YN  +    R +++D    L+  M   G+ P   T N+L+  LC  G   DA + 
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             ++          +  +  IL+  Y + G   +AL L + M    +Q + V YN LI+ 
Sbjct: 174 FDKMGVKG---CRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISS 230

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY---GVLSKTGV 362
           FC  G    A     +M + G  PDV+T+N+ ++ LC  GK+ EAS  +    +  + G+
Sbjct: 231 FCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGL 290

Query: 363 A-PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             P+  ++  +++G C  G + +A+  + SM     + E   +N+ + G  R G L  A 
Sbjct: 291 PRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQ 350

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
                M+  G+  N+++FN ++    + G I DA  +   M+  GI PD  TY+ L+   
Sbjct: 351 LALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGC 410

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C+ G +  A  +  EM+RRG +P+  T   L+      G + EAE++  K+      +D+
Sbjct: 411 CSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDN 470

Query: 542 IPFRILKKRYRRMKESDKARDI 563
           +   I+     +  + D+A +I
Sbjct: 471 VTCNIVIDGLCKSGKLDEAVEI 492



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 182/395 (46%), Gaps = 13/395 (3%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P V  +N ++    +   ++    + ++M     SP   T N  I G C     + A  +
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M   G RPN  +  ILV   C+ GL   A++ L  +     G   + VI +T L+ S
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGM--GSFGVQPNKVIYNT-LISS 230

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM-------L 323
           + + G   +A  L   M +  +  D+V +N  I+  C  G I  A   F  M       L
Sbjct: 231 FCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGL 290

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            R   P++ T+N +L   CK+G L+EA      + + G   +  SY   + GL  +G ++
Sbjct: 291 PR---PNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLL 347

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A+  L  M++K + P  + +N ++DG  + G +S+A  I  LM+S G+  +  T++ L+
Sbjct: 348 EAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLL 407

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                 G +  A ++  EM+  G  P+ +T N+L+ +    G I  A +L  +M  R   
Sbjct: 408 HGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYD 467

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            D +T   +I G C  G + EA E+   +   G A
Sbjct: 468 LDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSA 502



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 208/460 (45%), Gaps = 34/460 (7%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           LK M D G     +E +      V+  LC  G I  A  +   MI  G  PD +T++ L+
Sbjct: 353 LKEMVDKG-----IEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLL 407

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           +  C  G + KA++++ EM     SPN  T N  +    +   + +A  L   M      
Sbjct: 408 HGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYD 467

Query: 221 PNRVTHNILVHALCKKGLLGDAVK-------------------FLGEVLADDDGKAT-SD 260
            + VT NI++  LCK G L +AV+                   F+G V +  +GK    D
Sbjct: 468 LDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPD 527

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           +IT +I+++   K G   +A   + +M  K++  D + Y+  I+ FC +G ISSAF    
Sbjct: 528 LITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLK 587

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            M KRG    + TYN+L+  L  + ++ E       + + G+ P+  +Y  +I  LC  G
Sbjct: 588 DMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGG 647

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF-GVSSNVFT- 438
            I  A   L  ML+K + P    + ++I  + +  D      + ++ LS  G    +++ 
Sbjct: 648 RIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSL 707

Query: 439 -FNALILAETRGGSIFDAFSLKKEMLLDGIFP-DVFTYNLLIGASCNLGHIHLALQLYDE 496
            FN L++    GG + +A  L  +  LD  F    F YN LI   C    +  A  +  +
Sbjct: 708 MFNELLI----GGEVSEAKELF-DAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHK 762

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           M+ +G   D  ++  +I G   RG   +A+E+  ++  + 
Sbjct: 763 MIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMA 802



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 151/369 (40%), Gaps = 63/369 (17%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM------------ 179
           G+I  A  L +KM ++    D +T N +++ LCK G L++A  ++  M            
Sbjct: 449 GRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLG 508

Query: 180 -----------SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
                      +  +  P+  TY+  I G C+   LD+A   F  M    + P+ + ++ 
Sbjct: 509 NSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDT 568

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
            +H+ CK G +  A + L ++  +  G   S    +++++    KN   F+   L +DM 
Sbjct: 569 FIHSFCKHGKISSAFRVLKDM--EKRGCNKSLQTYNSLILGLGSKN-QIFEIYGLLDDMK 625

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ---- 344
           +K I  +I  YN +I+  C  G I  A +   +ML++G  P++ ++  L+   CK     
Sbjct: 626 EKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFG 685

Query: 345 ------------------------------GKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
                                         G++ EA   +              Y  +I+
Sbjct: 686 VVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIE 745

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML---SFG 431
            LC    +  A + L  M++K    +P  +  +IDG G+ G   +A  + + M+   S G
Sbjct: 746 KLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASEG 805

Query: 432 VSSNVFTFN 440
           +  N  T N
Sbjct: 806 MVENKITRN 814



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 72/132 (54%), Gaps = 2/132 (1%)

Query: 436 VFTFNALILAETRGGSIFDAFS-LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           V+ +N ++ +  R   + D+FS L K+M++ G+ P+ +T NLLI   C+ G    A +++
Sbjct: 116 VYLYNMVLESSLREDKV-DSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVF 174

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           D+M  +G  P+  ++  L++G+C  G    A E+   + + G+  + + +  L   + R 
Sbjct: 175 DKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCRE 234

Query: 555 KESDKARDIHQK 566
             +++A  + ++
Sbjct: 235 GRNEEAERLVER 246


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 217/440 (49%), Gaps = 19/440 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI----------------G 167
           VI  L   G++  A  L  +M+ +G  P+++T+N +++ LCK                 G
Sbjct: 145 VINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKG 204

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
            LE+A  ++++MS     P+  TY+  I  YC++    +A ++F +M   G  P+  T+ 
Sbjct: 205 QLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYR 264

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            L+H    KG L D    L   L   DG    D + + IL+ +Y KN    +A+  + +M
Sbjct: 265 TLLHGYATKGALVDMHDLLA--LMIQDGIPLEDHVFN-ILIRAYAKNETLDKAMTAFIEM 321

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            QK    ++V Y  +I+  C  G +  A ++F QM+  G  PD+IT+ +L++ LC  G+ 
Sbjct: 322 RQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEW 381

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            +       +   G+ P+ I   TI+  LC  G +++A +F   ++   V P+   + ++
Sbjct: 382 KKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTIL 441

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           IDGY   G +  +  +   M+S G+  +  T++AL+    + G + DA +L +EM    +
Sbjct: 442 IDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDV 501

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            P+  TYN+++    + G +  A + Y +++  GI   I TY  ++ G C    + EA  
Sbjct: 502 KPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALR 561

Query: 528 VFAKIQTLGLAIDHIPFRIL 547
           +F  +++    ++   F I+
Sbjct: 562 MFQGLRSKEFQLEVRTFNIM 581



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 198/406 (48%), Gaps = 21/406 (5%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA--- 207
           P+VL++N ++N L K G+++KA  +  EM      PN  TYN+ I G C+   +DKA   
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196

Query: 208 -------------LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
                        + L   M+  G++P+ VT+++L+   CK G   +A      ++    
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
                D  T   L+  Y   G       L   M Q  I  +   +N+LI  +  N  +  
Sbjct: 257 ---NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDK 313

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA-SHFYGVLSKTGVAPDQISYKTII 373
           A   F +M ++GF P+V+TY T+++ LCK G++++A SHF  ++S+ G++PD I++ ++I
Sbjct: 314 AMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSE-GLSPDIITFTSLI 372

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            GLC  G+  K  +    M+ + + P     N I+D   + G +  A    D ++  GV 
Sbjct: 373 HGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVK 432

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            +V ++  LI      G + ++  L   M+  G+ PD  TY+ L+   C  G +  AL L
Sbjct: 433 PDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALAL 492

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           Y EM  + + P+ ITY  ++ G    G +  A E + KI   G+ +
Sbjct: 493 YREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQL 538



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 184/382 (48%), Gaps = 29/382 (7%)

Query: 207 ALHLFSTMANNGIRP---NRVTHNILVHALCKKGLLGDAV-------KFLGEVLADDDGK 256
           A+ LF+TMA  G+     +  T  IL+   C  GLL  A+       +    ++ADD   
Sbjct: 75  AVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYN 134

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              +V++  ++++  FK G+  +A  L+++M  +    +IV YN +I+G C    +  A 
Sbjct: 135 CPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAE 194

Query: 317 AYFCQMLKRGFL----------------PDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           A   QM  +G L                PDV+TY+ L++  CK G+  EA + +  + + 
Sbjct: 195 AVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRR 254

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  PD  +Y+T++ G    G +V   + L  M++  +  E H++N++I  Y +   L  A
Sbjct: 255 GQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKA 314

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
            +    M   G S NV T+  +I    + G + DA S   +M+ +G+ PD+ T+  LI  
Sbjct: 315 MTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHG 374

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C +G      +L  EM+ RGI P+ I    ++   C  G + EA + F +I  +G+  D
Sbjct: 375 LCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPD 434

Query: 541 HIPFRILKKRY---RRMKESDK 559
            + + IL   Y    +M ES K
Sbjct: 435 VVSYTILIDGYCLDGKMDESIK 456



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 178/393 (45%), Gaps = 44/393 (11%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M QKG  P+V+T+  +++ LCK G +E A     +M     SP+  T+ + I G C + 
Sbjct: 320 EMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIG 379

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           E  K   L   M N GI PN +  N ++ +LCK+G + +A  F  +++         DV+
Sbjct: 380 EWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQII---HVGVKPDVV 436

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           + TIL+D Y  +G   +++ L   M    ++ D V Y+ L+NG+C NG +  A A + +M
Sbjct: 437 SYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREM 496

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
             +   P+ ITYN +L+ L   G++  A  FY  +  +G+     +Y  ++ GLC +  +
Sbjct: 497 FSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFV 556

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDG---YGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
            +A      +  K    E   +N++I G    GR GD  + FS                 
Sbjct: 557 DEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFS----------------- 599

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
                                 +L  G+ PD   Y L+I +    G +  + +L+  M +
Sbjct: 600 ---------------------AILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEK 638

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            G T +  T   +++    +G+++ A     KI
Sbjct: 639 NGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKI 671



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 173/352 (49%), Gaps = 12/352 (3%)

Query: 96  ENLDRLKT----MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           E LD+  T    MR  G        +   +  VI  LC  G++  A+    +M+ +G  P
Sbjct: 309 ETLDKAMTAFIEMRQKG-----FSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSP 363

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D++T   L++ LC IG+ +K + +  EM      PN    N  +   C+   + +A   F
Sbjct: 364 DIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFF 423

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             + + G++P+ V++ IL+   C  G + +++K LG +++        D +T + L++ Y
Sbjct: 424 DQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIG---LRPDNVTYSALLNGY 480

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            KNG    ALAL+ +MF K+++ + + YN++++G    G + +A  ++ +++  G    +
Sbjct: 481 CKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGI 540

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            TYN +L  LC+   +DEA   +  L       +  ++  +I GL   G I  A+    +
Sbjct: 541 NTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSA 600

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +L   +VP+  I+ ++I  +   G L  +  +   M   G ++N  T NA++
Sbjct: 601 ILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIV 652



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 3/307 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D     ++I  LC  G+      L  +MI +G  P+ +  N +++ LCK G + +A 
Sbjct: 361 LSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAH 420

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
               ++  +   P+  +Y   I GYC   ++D+++ L   M + G+RP+ VT++ L++  
Sbjct: 421 DFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGY 480

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G + DA+    E+ + D      + IT  I++   F  G    A   +  +    IQ
Sbjct: 481 CKNGRVDDALALYREMFSKD---VKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQ 537

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             I  YN+++ G C N  +  A   F  +  + F  +V T+N ++  L K G++ +A   
Sbjct: 538 LGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSL 597

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  +  +G+ PD I Y  +IQ     G + ++ E  LSM +          N I+     
Sbjct: 598 FSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLE 657

Query: 414 CGDLSNA 420
            GD+  A
Sbjct: 658 KGDVRRA 664



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 130/302 (43%), Gaps = 41/302 (13%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS--------AFAYFCQMLKRG---FL 328
           AL L++++  +     + A+N ++     +GD SS        A + F  M + G     
Sbjct: 33  ALNLFDELLPRARSASVHAFNRVLT-VVAHGDSSSSQRHGAALAVSLFNTMAQVGVNKLA 91

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV----------APDQISYKTIIQGLCI 378
            D  T+  L+ C C  G LD A       S+  V           P+ +SY  +I GL  
Sbjct: 92  TDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFK 151

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G++ KA      ML +   P    +N +IDG  +   +  A ++   M           
Sbjct: 152 EGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFD--------- 202

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
                      G + +A  L K+M   G+ PDV TY+LLI   C +G    A  ++D M+
Sbjct: 203 ----------KGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMV 252

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
           RRG  PD  TY  L+ G+  +G + +  ++ A +   G+ ++   F IL + Y + +  D
Sbjct: 253 RRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLD 312

Query: 559 KA 560
           KA
Sbjct: 313 KA 314



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 1/156 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC    +  AL + + +  K    +V T N ++  L K+G +  A  +   +    
Sbjct: 546 VLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSG 605

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   Y   I  +     L+++  LF +M  NG   N  T N +V  L +KG +  A 
Sbjct: 606 LVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAG 665

Query: 244 KFLGEVLADD-DGKATSDVITSTILMDSYFKNGDKF 278
            +L ++   +   +A++ V+  +I+ +  ++   KF
Sbjct: 666 TYLTKIDEKEYSVEASTAVLLISIVSERKYQKEVKF 701


>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
          Length = 561

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 196/404 (48%), Gaps = 7/404 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+   A  L R M  +G  P+ +T+  L++ LCK G +E A  +   M E         Y
Sbjct: 65  GRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPY 124

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N+ I GYC+ N   +A  L + M   G+ P+  +++ L+  LC+KG L  A++   E+  
Sbjct: 125 NSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTR 184

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
           +     + +V T T L+  + K+G+  +A  L++ M + ++  + V +NV+I G+C  G+
Sbjct: 185 N---AVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGN 241

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I  AF  + QML RG  PD  TY +L++ +C      +A  F   L       +  S   
Sbjct: 242 IRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTA 301

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++ G C  G    A      ML    +P  + +N  +D     G+L  A  +   ML  G
Sbjct: 302 LMHGFCKEGS---AEILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAAMLE-G 357

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
             +N  TFN LI      G I  A  L ++    G FPD  +Y+ +I   C +G  + A 
Sbjct: 358 CLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKAF 417

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           +L++EML +G+ PDI+ YT LI+     G   +   +++ + T+
Sbjct: 418 ELWNEMLYKGLKPDIVAYTILIRWCNIHGEFDKGLGIYSDMVTV 461



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 193/436 (44%), Gaps = 71/436 (16%)

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           G + K+  +  +  ++    N    NA+I    +     +A  LF  MA+ G+ PN VT+
Sbjct: 30  GHIHKSFRLTGQNCKLGIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTY 89

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
            IL+H+LC                                      K G    AL +++ 
Sbjct: 90  AILIHSLC--------------------------------------KRGMMEDALCMFDR 111

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +K I+  +  YN LING+C + +   A     +M+ +G  P   +Y+ L+  LC++G 
Sbjct: 112 MREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGD 171

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           L  A   +  +++  V+ +  ++  +I G C  G++ +A      M+E S+VP    +NV
Sbjct: 172 LASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNV 231

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--LAETRGG-------------- 450
           +I+GY R G++  AF + D ML  G++ + +T+ +LI  +  T G               
Sbjct: 232 MIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNC 291

Query: 451 SIFDAFSLK----------------KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           ++ ++FSL                 KEML     P+ +TYN  +    N G +  A  L+
Sbjct: 292 AVLNSFSLTALMHGFCKEGSAEILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAKVLH 351

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
             ML  G   + +T+  LIKG C  G ++ A ++  K    G   D I +  +     ++
Sbjct: 352 AAMLE-GCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCKV 410

Query: 555 KESDKARDIHQKWLLR 570
            +++KA ++  + L +
Sbjct: 411 GDTNKAFELWNEMLYK 426



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 145/320 (45%), Gaps = 45/320 (14%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G + +A+ L R+M +     +V T   L++  CK G++++A  +  +M E  
Sbjct: 162 LIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESS 221

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV------------- 230
             PN  T+N  I GYCRV  + KA  L+  M + G+ P+  T+  L+             
Sbjct: 222 LVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAK 281

Query: 231 ----------------------HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
                                 H  CK+G    A     E+LA   G    +  T    +
Sbjct: 282 EFVADLENNCAVLNSFSLTALMHGFCKEG---SAEILCKEMLA---GHFLPNSYTYNCFL 335

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           D     G+  +A  L   M +  +  + V +N LI GFC+ G I  A     +  + GF 
Sbjct: 336 DYLANEGELEKAKVLHAAMLEGCL-ANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFF 394

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           PD I+Y+T++N LCK G  ++A   +  +   G+ PD ++Y  +I+   IHG+  K    
Sbjct: 395 PDCISYSTIINELCKVGDTNKAFELWNEMLYKGLKPDIVAYTILIRWCNIHGEFDKGLGI 454

Query: 389 LLSMLEKSVVPE-PHIWNVI 407
              M+  +V+PE P ++N++
Sbjct: 455 YSDMV--TVLPEYPEVYNIV 472



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 166/351 (47%), Gaps = 12/351 (3%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           ++++ L     MR+ G +R T+      + ++I   C       A  L  +M+ KG  P 
Sbjct: 101 MMEDALCMFDRMREKG-IRMTVYP----YNSLINGYCKHNNFHQARGLLNEMVAKGLTPS 155

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
             +++ L+  LC+ GDL  A  + REM+    S N  T+ A I+G+C+   +D+A  LF 
Sbjct: 156 PASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFH 215

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M  + + PN VT N+++   C+ G +  A +   ++L   D   T D  T   L+    
Sbjct: 216 KMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQML---DRGLTPDNYTYRSLISVVC 272

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
                 +A     D+       +  +   L++GFC  G   SA     +ML   FLP+  
Sbjct: 273 LTLGAMKAKEFVADLENNCAVLNSFSLTALMHGFCKEG---SAEILCKEMLAGHFLPNSY 329

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TYN  L+ L  +G+L++A   +  + + G   + +++ T+I+G C+ G I  A + +   
Sbjct: 330 TYNCFLDYLANEGELEKAKVLHAAMLE-GCLANTVTFNTLIKGFCMAGQIQGAIDLMQKN 388

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            E    P+   ++ II+   + GD + AF + + ML  G+  ++  +  LI
Sbjct: 389 TESGFFPDCISYSTIINELCKVGDTNKAFELWNEMLYKGLKPDIVAYTILI 439



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 127/240 (52%)

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
           ++G I  +F    Q  K G + +++  N  ++ L K G+  EA   +  ++  G+ P+++
Sbjct: 28  MSGHIHKSFRLTGQNCKLGIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEV 87

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y  +I  LC  G +  A      M EK +    + +N +I+GY +  +   A  + + M
Sbjct: 88  TYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEM 147

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           ++ G++ +  +++ LI    R G +  A  L +EM  + +  +V+T+  LI   C  G++
Sbjct: 148 VAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNM 207

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A +L+ +M+   + P+ +T+  +I+G+C  GN+++A +++ ++   GL  D+  +R L
Sbjct: 208 DEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSL 267



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 1/176 (0%)

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
           S + + H W   + G    G +  +F +       G+ +N+   NA I    + G   +A
Sbjct: 11  SWIHQKHNWAWKLRGKRMSGHIHKSFRLTGQNCKLGIVANLLACNAWIDRLGKDGRYREA 70

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             L + M   G+ P+  TY +LI + C  G +  AL ++D M  +GI   +  Y  LI G
Sbjct: 71  EKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLING 130

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           +C   N  +A  +  ++   GL      +  L     R  +   A ++H++ + RN
Sbjct: 131 YCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHRE-MTRN 185


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 223/481 (46%), Gaps = 72/481 (14%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P++ T+N ++  LC  GD+++A  +   +     +P+  TY+  ++G  + ++LD AL 
Sbjct: 155 APNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALD 214

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L   M N G++ + V +N L+    + G+   A+K + E L  D G A+ ++ T  +++D
Sbjct: 215 LLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMK-VWEQLVRDPG-ASPNLATYKVMLD 272

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K G   +A  +W+ M   N Q D V Y +LI+G C +GD+ SA   +  M+K G + 
Sbjct: 273 GLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVL 332

Query: 330 DVITYNTLLNCLCKQGKLDEASHF--------------YGVLSK---------------- 359
           DV  YN+L+   C+ G+  EA  F              Y +++K                
Sbjct: 333 DVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLK 392

Query: 360 -----TGVAPDQISYKTIIQGLCIHGDIVKAREFL------------------------- 389
                   +PD++++ T+I GLC +G   +A E L                         
Sbjct: 393 QLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKD 452

Query: 390 ----------LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
                      +M++    P  H++N +I+G+ R   +++A  I   M S G    + T+
Sbjct: 453 GRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITY 512

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N LI    +     +A SL KEML  G  PD+ TY  LI   C    + +AL+++DE+L 
Sbjct: 513 NTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILD 572

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G+  D++ +  LI G C+ G + EA  ++ +++    + + + +  L   +  +   DK
Sbjct: 573 AGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDK 632

Query: 560 A 560
           A
Sbjct: 633 A 633



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 198/422 (46%), Gaps = 3/422 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  G+   A  +  +M+      D +T+  L++ LC+ GD++ A  V  +M +     +
Sbjct: 274 LCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLD 333

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
            + YN+ I G+C V    +A   + +   +GIR    T+NI+   L   G++ +A + L 
Sbjct: 334 VSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLK 392

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           ++  ++D   + D +T   L+    +NG   +A  +  D      + D+ +Y+ +IN FC
Sbjct: 393 QL--ENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFC 450

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            +G    A   +  M+K G  P+   YN L+N  C+  K+++A   Y  ++  G  P  I
Sbjct: 451 KDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTII 510

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y T+I GLC      +A      MLE+   P+   +  +I G  R   +  A  I D +
Sbjct: 511 TYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEI 570

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           L  G+  +V   N LI      G + +AF +  EM      P++ TYN L+     +G I
Sbjct: 571 LDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSI 630

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A  L+  +L  G+ PDI+TY   IKG C+     E   +  ++   G+    I + IL
Sbjct: 631 DKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSIL 690

Query: 548 KK 549
            +
Sbjct: 691 VR 692



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 156/358 (43%), Gaps = 47/358 (13%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E L +L+      P + T  T       +I  LC  G    A  +       G   DV +
Sbjct: 389 ELLKQLENDASCSPDKVTFGT-------LIHGLCENGYANRAFEILEDARNSGEELDVFS 441

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           ++ ++N  CK G    A+ V + M +    PN   YNA I G+CRV++++ A+ ++  M 
Sbjct: 442 YSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMT 501

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           +NG  P  +T+N L+  LCK                                        
Sbjct: 502 SNGCCPTIITYNTLIDGLCK---------------------------------------A 522

Query: 276 DKFQ-ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           +K+Q A +L  +M ++  + DI  Y  LI G C +  +  A   + ++L  G   DV+ +
Sbjct: 523 EKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVH 582

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N L++ LC  GK+DEA   Y  + +   +P+ ++Y T++ G    G I KA     ++L+
Sbjct: 583 NILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILD 642

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
             + P+   +N  I G   C        + + +L+ G+   V T++ L+ A  + G I
Sbjct: 643 NGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPI 700



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 132/293 (45%), Gaps = 3/293 (1%)

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A + L  +L  + G  + + +    +    + + D F A +L +  F + I  ++  YN+
Sbjct: 105 AFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFA-SLSHGAFGRRIAPNLQTYNI 163

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           ++   C  GD+  A + F  + +RG  PD +TY+TL++ L K  +LD A      +   G
Sbjct: 164 ILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYG 223

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSML-EKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           V  D + Y  ++ G    G   KA +    ++ +    P    + V++DG  + G    A
Sbjct: 224 VQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEA 283

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +   M++    ++  T+  LI    R G +  A  +  +M+  G+  DV  YN LI  
Sbjct: 284 GEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKG 343

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            C +G    A + +D     GI   I TY  + KG    G + EA E+  +++
Sbjct: 344 FCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLE 395


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 213/458 (46%), Gaps = 19/458 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ L   G I  AL L  +M+  G  P+  T+N L++ LCK G    A  +  EM +  
Sbjct: 178 ILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRG 237

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN   Y   ++  C   ++D+A+ L  +M + G  P+ VT+N  +  LCK G + +A 
Sbjct: 238 IMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAF 297

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L  V+  D G A   +   + L+D  F+     +    +  M ++NI  D+V Y ++I
Sbjct: 298 QRL--VMLQDGGFALG-LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMI 354

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G    G I  A ++   M K+GF+PD   YNT+L  LC  G L+ A      + +  + 
Sbjct: 355 RGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLV 414

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D  +   +I GLC  G + +A +    M E    P    +N +IDG+ R G L  A  +
Sbjct: 415 LDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARML 474

Query: 424 ---------RDLMLSFGVSSNVF----TFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
                      L L   + +N      +   L+    + G +  A+ L + ++  G+ PD
Sbjct: 475 FHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPD 534

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V TYN LI   C   ++  A++L+ E+  +GI+PD ITY  LI G        +A  +F 
Sbjct: 535 VVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQ 594

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            I   G +     +  + +   RMK+  +A ++   WL
Sbjct: 595 NILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL---WL 629



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 202/456 (44%), Gaps = 26/456 (5%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G+   A+    +M +  + P    +N ++  L   G +  A  +   M     +PN AT
Sbjct: 150 AGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRAT 209

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  + G C+      AL +F  M + GI PN   + +L+ +LC  G + +AV+ LG + 
Sbjct: 210 YNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSM- 268

Query: 251 ADDDGKATSDVITSTILMDSYFKNG---DKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
              D     D +T    +    K G   + FQ L +  D         +  Y+ LI+G  
Sbjct: 269 --KDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQD---GGFALGLKGYSCLIDGLF 323

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
                   F Y+  ML+R   PDV+ Y  ++    + G++++A  F  V+ K G  PD  
Sbjct: 324 QARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTF 383

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            Y T+++ LC HGD+ +A      ML+ ++V +     ++I G  + G +  A  I D M
Sbjct: 384 CYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEM 443

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS------ 481
              G    V T+NALI    R G + +A  L  +M + G  P +F   L +GA+      
Sbjct: 444 GEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM-GNNPSLF-LRLTLGANQVRDSE 501

Query: 482 ---------CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
                    C  G +  A +L   ++  G+ PD++TY  LI G C   N+  A  +F ++
Sbjct: 502 SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKEL 561

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           Q  G++ D I +  L     R    + A  + Q  L
Sbjct: 562 QLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNIL 597



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 156/354 (44%), Gaps = 3/354 (0%)

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G+  +      LV A    G   DAV+    +   D+ ++         ++ +   +G  
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRM---DEFQSRPTAFVYNTILKALVDSGVI 188

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             ALAL+N M       +   YNVL++G C  G    A   F +ML RG +P+V  Y  L
Sbjct: 189 LLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVL 248

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           L+ LC  GK+DEA    G +   G  PD+++Y   + GLC  G + +A + L+ + +   
Sbjct: 249 LSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGF 308

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
                 ++ +IDG  +       F     ML   +S +V  +  +I      G I DA S
Sbjct: 309 ALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALS 368

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
               M   G  PD F YN ++   C+ G +  A  L  EML+  +  D  T T +I G C
Sbjct: 369 FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLC 428

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            RG + EA ++F ++   G     + +  L   + R    ++AR +  K  + N
Sbjct: 429 KRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGN 482



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 183/397 (46%), Gaps = 24/397 (6%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++  LC  GKI  A+ L   M  KG +PD +T+N  ++ LCK+G + +A   +  + 
Sbjct: 245 YTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   +     Y+  I G  +    D+    + TM    I P+ V + I++    + G + 
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFK----NGDKFQALALWNDMFQKNIQTDI 296
           DA+ FL       D       +  T   ++  K    +GD  +A  L ++M Q N+  D 
Sbjct: 365 DALSFL-------DVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDS 417

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY-- 354
               ++I G C  G +  A   F +M + G  P V+TYN L++   ++G+L+EA   +  
Sbjct: 418 TTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHK 477

Query: 355 -------GVLSKTGVAPDQI----SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
                   +  +  +  +Q+    S + ++  +C  G ++KA + L S+++  VVP+   
Sbjct: 478 MEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVT 537

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N +I+G  +  +L  A  +   +   G+S +  T+  LI    R     DA  L + +L
Sbjct: 538 YNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNIL 597

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
             G  P +  YN ++ + C +  +  A+ L+ + L +
Sbjct: 598 QSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK 634



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 156/349 (44%), Gaps = 15/349 (4%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   +  +IR     G+I  AL     M +KG VPD   +N ++  LC  GDLE+A 
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAH 402

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM +     +  T    I G C+   +D+A+ +F  M  +G  P  +T+N L+   
Sbjct: 403 TLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGF 462

Query: 234 CKKGLLGDAVKFLGEVLADDD----------GKATSDVITSTILMDSYFKNGDKFQALAL 283
            ++G L +A     ++   ++               D  +   L+    ++G   +A  L
Sbjct: 463 YREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKL 522

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
              +    +  D+V YN LING C   ++  A   F ++  +G  PD ITY TL++ L +
Sbjct: 523 LRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
             + ++A   +  + ++G +P    Y ++++ LC    + +A    L  L K     P  
Sbjct: 583 AHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK-YNFPVE 641

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLM---LSFG-VSSNVFTFNALILAETR 448
             V+ + +    D S    +R+L+     +G +SSN +T   + L + R
Sbjct: 642 SEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVR 690



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 126/310 (40%), Gaps = 5/310 (1%)

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
            S +L  S   +   F ALA   D     +     A+  L+      G  + A   F +M
Sbjct: 107 VSLLLRLSSHADEAMFDALA---DARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRM 163

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            +    P    YNT+L  L   G +  A   Y  +   G AP++ +Y  ++ GLC  G  
Sbjct: 164 DEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMA 223

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A +    ML++ ++P   I+ V++      G +  A  +   M   G   +  T+NA 
Sbjct: 224 GDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAF 283

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFP-DVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +    + G + +AF  +  ML DG F   +  Y+ LI               Y  ML R 
Sbjct: 284 LSGLCKVGRVNEAFQ-RLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN 342

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
           I+PD++ YT +I+G    G +++A      ++  G   D   +  + K      + ++A 
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAH 402

Query: 562 DIHQKWLLRN 571
            +  + L  N
Sbjct: 403 TLRSEMLQNN 412


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 213/458 (46%), Gaps = 19/458 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ L   G I  AL L  +M+  G  P+  T+N L++ LCK G    A  +  EM +  
Sbjct: 178 ILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRG 237

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN   Y   ++  C   ++D+A+ L  +M + G  P+ VT+N  +  LCK G + +A 
Sbjct: 238 IMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAF 297

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L  V+  D G A   +   + L+D  F+     +    +  M ++NI  D+V Y ++I
Sbjct: 298 QRL--VMLQDGGFALG-LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMI 354

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G    G I  A ++   M K+GF+PD   YNT+L  LC  G L+ A      + +  + 
Sbjct: 355 RGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLV 414

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D  +   +I GLC  G + +A +    M E    P    +N +IDG+ R G L  A  +
Sbjct: 415 LDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARML 474

Query: 424 ---------RDLMLSFGVSSNVF----TFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
                      L L   + +N      +   L+    + G +  A+ L + ++  G+ PD
Sbjct: 475 FHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPD 534

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V TYN LI   C   ++  A++L+ E+  +GI+PD ITY  LI G        +A  +F 
Sbjct: 535 VVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQ 594

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            I   G +     +  + +   RMK+  +A ++   WL
Sbjct: 595 NILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL---WL 629



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 202/456 (44%), Gaps = 26/456 (5%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G+   A+    +M +  + P    +N ++  L   G +  A  +   M     +PN AT
Sbjct: 150 AGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRAT 209

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  + G C+      AL +F  M + GI PN   + +L+ +LC  G + +AV+ LG + 
Sbjct: 210 YNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSM- 268

Query: 251 ADDDGKATSDVITSTILMDSYFKNG---DKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
              D     D +T    +    K G   + FQ L +  D         +  Y+ LI+G  
Sbjct: 269 --KDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQD---GGFALGLKGYSCLIDGLF 323

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
                   F Y+  ML+R   PDV+ Y  ++    + G++++A  F  V+ K G  PD  
Sbjct: 324 QARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTF 383

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            Y T+++ LC HGD+ +A      ML+ ++V +     ++I G  + G +  A  I D M
Sbjct: 384 CYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEM 443

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS------ 481
              G    V T+NALI    R G + +A  L  +M + G  P +F   L +GA+      
Sbjct: 444 GEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM-GNNPSLF-LRLTLGANQVCDSE 501

Query: 482 ---------CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
                    C  G +  A +L   ++  G+ PD++TY  LI G C   N+  A  +F ++
Sbjct: 502 SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKEL 561

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           Q  G++ D I +  L     R    + A  + Q  L
Sbjct: 562 QLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNIL 597



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 156/354 (44%), Gaps = 3/354 (0%)

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G+  +      LV A    G   DAV+    +   D+ ++         ++ +   +G  
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRM---DEFQSRPTAFVYNTILKALVDSGVI 188

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             ALAL+N M       +   YNVL++G C  G    A   F +ML RG +P+V  Y  L
Sbjct: 189 LLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVL 248

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           L+ LC  GK+DEA    G +   G  PD+++Y   + GLC  G + +A + L+ + +   
Sbjct: 249 LSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGF 308

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
                 ++ +IDG  +       F     ML   +S +V  +  +I      G I DA S
Sbjct: 309 ALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALS 368

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
               M   G  PD F YN ++   C+ G +  A  L  EML+  +  D  T T +I G C
Sbjct: 369 FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLC 428

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            RG + EA ++F ++   G     + +  L   + R    ++AR +  K  + N
Sbjct: 429 KRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGN 482



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 183/397 (46%), Gaps = 24/397 (6%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++  LC  GKI  A+ L   M  KG +PD +T+N  ++ LCK+G + +A   +  + 
Sbjct: 245 YTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   +     Y+  I G  +    D+    + TM    I P+ V + I++    + G + 
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFK----NGDKFQALALWNDMFQKNIQTDI 296
           DA+ FL       D       +  T   ++  K    +GD  +A  L ++M Q N+  D 
Sbjct: 365 DALSFL-------DVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDS 417

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY-- 354
               ++I G C  G +  A   F +M + G  P V+TYN L++   ++G+L+EA   +  
Sbjct: 418 TTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHK 477

Query: 355 -------GVLSKTGVAPDQI----SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
                   +  +  +  +Q+    S + ++  +C  G ++KA + L S+++  VVP+   
Sbjct: 478 MEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVT 537

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N +I+G  +  +L  A  +   +   G+S +  T+  LI    R     DA  L + +L
Sbjct: 538 YNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNIL 597

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
             G  P +  YN ++ + C +  +  A+ L+ + L +
Sbjct: 598 QSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK 634



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 156/349 (44%), Gaps = 15/349 (4%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   +  +IR     G+I  AL     M +KG VPD   +N ++  LC  GDLE+A 
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAH 402

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM +     +  T    I G C+   +D+A+ +F  M  +G  P  +T+N L+   
Sbjct: 403 TLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGF 462

Query: 234 CKKGLLGDAVKFLGEVLADDD----------GKATSDVITSTILMDSYFKNGDKFQALAL 283
            ++G L +A     ++   ++               D  +   L+    ++G   +A  L
Sbjct: 463 YREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKL 522

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
              +    +  D+V YN LING C   ++  A   F ++  +G  PD ITY TL++ L +
Sbjct: 523 LRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
             + ++A   +  + ++G +P    Y ++++ LC    + +A    L  L K     P  
Sbjct: 583 AHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK-YNFPVE 641

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLM---LSFG-VSSNVFTFNALILAETR 448
             V+ + +    D S    +R+L+     +G +SSN +T   + L + R
Sbjct: 642 SEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVR 690



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 126/310 (40%), Gaps = 5/310 (1%)

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
            S +L  S   +   F ALA   D     +     A+  L+      G  + A   F +M
Sbjct: 107 VSLLLRLSSHADEAMFDALA---DARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRM 163

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            +    P    YNT+L  L   G +  A   Y  +   G AP++ +Y  ++ GLC  G  
Sbjct: 164 DEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMA 223

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A +    ML++ ++P   I+ V++      G +  A  +   M   G   +  T+NA 
Sbjct: 224 GDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAF 283

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFP-DVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +    + G + +AF  +  ML DG F   +  Y+ LI               Y  ML R 
Sbjct: 284 LSGLCKVGRVNEAFQ-RLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN 342

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
           I+PD++ YT +I+G    G +++A      ++  G   D   +  + K      + ++A 
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAH 402

Query: 562 DIHQKWLLRN 571
            +  + L  N
Sbjct: 403 TLRSEMLQNN 412


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 193/386 (50%), Gaps = 3/386 (0%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           DV +   ++   C+ G++EK+  ++ E+ E   SPN   Y   I G C+  E++KA  LF
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF 221

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M   G+  N  T+ +L+H L K G+     +   ++   +DG    ++ T   +M+ +
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM--QEDG-VFPNLYTYNCVMNQH 278

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K+G    A  L+++M ++ +  +IV YN LI G C     + A     QM   G  P++
Sbjct: 279 CKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNL 338

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           ITYNTL++  C  GKL +A      L   G++P  ++Y  ++ G C  GD   A + +  
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKE 398

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M E+ + P    + ++ID + R  ++  A  +R  M   G++ +V T++ LI      G 
Sbjct: 399 MEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQ 458

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + +A  L K M+   + P+   YN ++   C  G  + AL+L+ EM  + + P++ +Y  
Sbjct: 459 MNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRY 518

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGL 537
           +I+  C     KEAE +  K+   G+
Sbjct: 519 MIEVLCKERKSKEAEGLVEKMIDTGI 544



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 184/382 (48%), Gaps = 5/382 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI+  C  G+I  +  L  ++ + G  P+V+ +  L++  CK G++EKA  +  EM +  
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFG 228

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  TY   I G  +     +   ++  M  +G+ PN  T+N +++  CK G   DA 
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAF 288

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K   E+    +   + +++T   L+    +     +A  + + M    I  +++ YN LI
Sbjct: 289 KLFDEM---RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLI 345

Query: 304 NGFCLNGDISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +GFC  G +  A +  C+ LK RG  P ++TYN L++  CK+G    A      + + G+
Sbjct: 346 DGFCGVGKLGKALS-LCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGI 404

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P +I+Y  +I       ++ KA +    M E  + P+ H ++V+I G+   G ++ A  
Sbjct: 405 KPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASR 464

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +  LM++  +  N   +N ++L   + GS + A  L +EM    + P+V +Y  +I   C
Sbjct: 465 LFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLC 524

Query: 483 NLGHIHLALQLYDEMLRRGITP 504
                  A  L ++M+  GI P
Sbjct: 525 KERKSKEAEGLVEKMIDTGIDP 546



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 168/370 (45%), Gaps = 39/370 (10%)

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y   I  Y +   LD ++  F+ M + G  P     N L+  +          +F  E  
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE-- 154

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                        S I +D                         D+ ++ ++I G C  G
Sbjct: 155 -------------SKIKVD------------------------LDVYSFGIVIKGCCEAG 177

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           +I  +F    ++ + GF P+V+ Y TL++  CK+G++++A   +  + K G+  ++ +Y 
Sbjct: 178 EIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYT 237

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +I GL  +G   +  E    M E  V P  + +N +++ + + G   +AF + D M   
Sbjct: 238 VLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRER 297

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GVS N+ T+N LI    R     +A  +  +M  DGI P++ TYN LI   C +G +  A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L L  ++  RG++P ++TY  L+ G C +G+   A +V  +++  G+    I + IL   
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDT 417

Query: 551 YRRMKESDKA 560
           + RM   +KA
Sbjct: 418 FARMDNMEKA 427



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 168/357 (47%), Gaps = 3/357 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I   C  G+I  A  L  +M + G V +  T+  L++ L K G  ++   +  +M 
Sbjct: 201 YTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQ 260

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN  TYN  +  +C+      A  LF  M   G+  N VT+N L+  LC++    
Sbjct: 261 EDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKAN 320

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A K + ++ +D       ++IT   L+D +   G   +AL+L  D+  + +   +V YN
Sbjct: 321 EANKVMDQMKSDG---INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYN 377

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +L++GFC  GD S A     +M +RG  P  ITY  L++   +   +++A      + + 
Sbjct: 378 ILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEEL 437

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ PD  +Y  +I G CI G + +A      M+ K + P   I+N ++ GY + G    A
Sbjct: 438 GLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRA 497

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             +   M    +  NV ++  +I    +     +A  L ++M+  GI P     NL+
Sbjct: 498 LRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 5/145 (3%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLET-----DYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           IL +   R+  M     +R  +E      D   +  +I   C+ G++  A  L + M+ K
Sbjct: 413 ILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAK 472

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
              P+ + +N +V   CK G   +A  + REM E    PN A+Y   I   C+  +  +A
Sbjct: 473 KLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEA 532

Query: 208 LHLFSTMANNGIRPNRVTHNILVHA 232
             L   M + GI P+    N++  A
Sbjct: 533 EGLVEKMIDTGIDPSDSILNLISRA 557


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 177/327 (54%), Gaps = 4/327 (1%)

Query: 110 VRC-TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           +RC  L  D   +  VI   C  G +  AL +R +M+  G +PDV+T+N L+N LCK   
Sbjct: 7   MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 66

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           L  A+ ++ EM E    P+  T+   I GYC   +LDKAL LF TM N  +RP+ VT+N 
Sbjct: 67  LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 126

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L+  +C++G L  A     ++ + +      + +T +IL+DS+ + G    A    ++M 
Sbjct: 127 LIDGMCRQGDLDKANDLWDDMHSRE---IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            K I  +I+ YN +I G+C +G++S    +  +M+     PD+ITYNTL++   K+ K+ 
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           +A     ++ K  V PD ++Y  +I G  +HG++ +A      M  K + P+ + +  +I
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           +G+   G+   AF + D ML  G + +
Sbjct: 304 NGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 169/323 (52%), Gaps = 3/323 (0%)

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G+ P+ V + +++   C+ GL+ DA++   E++         DV+T   L++   K    
Sbjct: 11  GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVG---CGCLPDVVTYNTLLNGLCKERRL 67

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             A  L N+M ++ +  D+  +  LI+G+C+ G +  A   F  ML +   PD++TYNTL
Sbjct: 68  LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 127

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           ++ +C+QG LD+A+  +  +    + P+ ++Y  +I   C  G +  A  FL  M+ K +
Sbjct: 128 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 187

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           +P    +N II GY R G++S        M+   VS ++ T+N LI    +   + DAF 
Sbjct: 188 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFK 247

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L   M  + + PDV TYN+LI      G++  A  ++++M  +GI PD  TY  +I GH 
Sbjct: 248 LLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHV 307

Query: 518 ARGNMKEAEEVFAKIQTLGLAID 540
             GN KEA ++  ++   G A D
Sbjct: 308 TAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 176/330 (53%), Gaps = 3/330 (0%)

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           +REM      P+   Y   I G+CR   +  AL +   M   G  P+ VT+N L++ LCK
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
           +  L DA   L E+    +     D+ T T L+  Y   G   +AL L++ M  + ++ D
Sbjct: 64  ERRLLDAEGLLNEM---RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           IV YN LI+G C  GD+  A   +  M  R   P+ +TY+ L++  C++G++++A  F  
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 180

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +   G+ P+ ++Y +II+G C  G++ K ++FL  M+   V P+   +N +I GY +  
Sbjct: 181 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 240

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            + +AF + ++M    V  +V T+N LI   +  G++ +A  + ++M   GI PD +TY 
Sbjct: 241 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 300

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPD 505
            +I      G+   A QL+DEML+RG  PD
Sbjct: 301 SMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 169/330 (51%), Gaps = 5/330 (1%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R+M   G VPD + +  ++   C+ G +  A  V  EM      P+  TYN  + G C+ 
Sbjct: 5   REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE 64

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
             L  A  L + M   G+ P+  T   L+H  C +G L  A++    +L   + +   D+
Sbjct: 65  RRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML---NQRLRPDI 121

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T   L+D   + GD  +A  LW+DM  + I  + V Y++LI+  C  G +  AF +  +
Sbjct: 122 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 181

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M+ +G LP+++TYN+++   C+ G + +   F   +    V+PD I+Y T+I G  I  D
Sbjct: 182 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY-IKED 240

Query: 382 IVKAREFLLSMLEKS-VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            +     LL+M+EK  V P+   +N++I+G+   G++  A  I + M + G+  + +T+ 
Sbjct: 241 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 300

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           ++I      G+  +AF L  EML  G  PD
Sbjct: 301 SMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 160/313 (51%)

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
             D +  T+++  + + G    AL + ++M       D+V YN L+NG C    +  A  
Sbjct: 13  VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 72

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
              +M +RG  PD+ T+ TL++  C +GKLD+A   +  +    + PD ++Y T+I G+C
Sbjct: 73  LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 132

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             GD+ KA +    M  + + P    ++++ID +   G + +AF   D M++ G+  N+ 
Sbjct: 133 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 192

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T+N++I    R G++       ++M+++ + PD+ TYN LI        +H A +L + M
Sbjct: 193 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 252

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
            +  + PD++TY  LI G    GN++EA  +F K+   G+  D   +  +   +     S
Sbjct: 253 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 312

Query: 558 DKARDIHQKWLLR 570
            +A  +H + L R
Sbjct: 313 KEAFQLHDEMLQR 325



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 3/247 (1%)

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
            AY  +M   G +PD + Y  ++   C+ G + +A      +   G  PD ++Y T++ G
Sbjct: 1   MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           LC    ++ A   L  M E+ V P+   +  +I GY   G L  A  + D ML+  +  +
Sbjct: 61  LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           + T+N LI    R G +  A  L  +M    IFP+  TY++LI + C  G +  A    D
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 180

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
           EM+ +GI P+I+TY  +IKG+C  GN+ + ++   K+    ++ D I +  L   Y  +K
Sbjct: 181 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY--IK 238

Query: 556 ESDKARD 562
           E DK  D
Sbjct: 239 E-DKMHD 244



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 98/209 (46%)

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ PD + Y  +I G C  G +  A      M+    +P+   +N +++G  +   L +A
Sbjct: 11  GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + M   GV  ++ TF  LI      G +  A  L   ML   + PD+ TYN LI  
Sbjct: 71  EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  G +  A  L+D+M  R I P+ +TY+ LI  HC +G +++A     ++   G+  +
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWLL 569
            + +  + K Y R     K +   QK ++
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMMV 219



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 68/137 (49%)

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M  FG+  +   +  +I    R G + DA  ++ EM+  G  PDV TYN L+   C    
Sbjct: 7   MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 66

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A  L +EM  RG+ PD+ T+T LI G+C  G + +A ++F  +    L  D + +  
Sbjct: 67  LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 126

Query: 547 LKKRYRRMKESDKARDI 563
           L     R  + DKA D+
Sbjct: 127 LIDGMCRQGDLDKANDL 143


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 216/454 (47%), Gaps = 42/454 (9%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNY----LVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           +I TA  L  +MI +    D+   NY    +V  LC  G +E    +I         PN 
Sbjct: 184 RIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNI 243

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             YN  I GYC+  E++ A  LF  +   G  P   T   LV+  CK G+  +A+  L  
Sbjct: 244 VFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMF-EAIDLL-- 300

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +L   D   + +V     ++D+ +K G   +A     +M +   + D+V YN LIN FC 
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS 360

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G++  A     Q ++RG  P+ +TY  L++  CKQG+  +A+ +   +S +G+  D IS
Sbjct: 361 RGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMIS 420

Query: 369 YKTIIQGLCIHGDI-----------------------------------VKAREFLLSML 393
           Y  +I GL + G++                                     A+  L  ML
Sbjct: 421 YGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEML 480

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           ++++ P+  ++  ++DG+ R G+L  A  +  L++  G+   V  +N +I   ++ G + 
Sbjct: 481 DQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMD 540

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A     +M      PD+FT++ +I       +++  L+++  M+++   P+++TYT LI
Sbjct: 541 NAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLI 600

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G+C +G  K AE++F+ +++ GL    + + IL
Sbjct: 601 NGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSIL 634



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 196/407 (48%), Gaps = 3/407 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G++ +A  L +K+  KG +P + T   LVN  CK+G  E  D ++ EM + 
Sbjct: 248 TLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDR 307

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             S N   YN  I    ++    KA      M+ N   P+ VT+N L++  C +G + +A
Sbjct: 308 GLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEA 367

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K L + +         + +T T L+  Y K G+  +A     +M    ++ D+++Y  L
Sbjct: 368 EKLLEQTIRRG---LAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGAL 424

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G  + G++ +A     +M+ RG LPD   YN L+N L K+GKL  A      +    +
Sbjct: 425 IHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNI 484

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           APD   Y T++ G   HG++ +A++    ++EK + P    +NV+I G+ + G + NA  
Sbjct: 485 APDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAIL 544

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
             D M       ++FTF+ +I    +  ++     +   M+     P+V TY  LI   C
Sbjct: 545 CIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYC 604

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
             G   +A +L+  M   G+ P ++TY+ LI   C    + +A   F
Sbjct: 605 RKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYF 651



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 202/443 (45%), Gaps = 28/443 (6%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D LK M +        E D   +  +I   C  G++  A  L  + I++G  P+ LT+  
Sbjct: 334 DTLKEMSEN-----CCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTP 388

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           LV+  CK G+  KA   + EMS      +  +Y A I G     E+D AL +   M N G
Sbjct: 389 LVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRG 448

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           I P+   +N+L++ L KKG L  A   L E+L   D     D      L+D + ++G+  
Sbjct: 449 ILPDANIYNVLMNGLFKKGKLSMAKVMLTEML---DQNIAPDAFVYATLVDGFIRHGNLD 505

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A  L+  + +K +   +V YNV+I GF  +G + +A     +M +   +PD+ T++T++
Sbjct: 506 EAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTII 565

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           +   KQ  ++     +G++ K    P+ ++Y ++I G C  G+   A +    M    + 
Sbjct: 566 DGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLK 625

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--------------- 443
           P    ++++I  + +   L  A S  +LML    + N   F+ L+               
Sbjct: 626 PSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREP 685

Query: 444 --LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
             L E       D FS    M+ DG       YN ++   C    +  ALQL ++ML  G
Sbjct: 686 NNLHENSRSMFEDFFS---RMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFG 742

Query: 502 ITPDIITYTELIKGHCARGNMKE 524
           +  D +++  LI G C  GN KE
Sbjct: 743 LCSDAVSFVALIHGICLEGNSKE 765



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 185/425 (43%), Gaps = 37/425 (8%)

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN-NGIRPNRVTHNILVH 231
           +  + EM      P     +  +  Y  V  +DKAL ++  +   +   P+    N L++
Sbjct: 118 EFTLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLN 177

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQK 290
            L K   +  A +   E++  D+G     D  T++I++      G     + L    + K
Sbjct: 178 LLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGK 237

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD-- 348
               +IV YN LI+G+C  G++ SA+  F ++  +GF+P + T+ +L+N  CK G  +  
Sbjct: 238 GCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAI 297

Query: 349 -----------------------EASHFYGV----------LSKTGVAPDQISYKTIIQG 375
                                  +A +  G           +S+    PD ++Y T+I  
Sbjct: 298 DLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINH 357

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C  G++ +A + L   + + + P    +  ++ GY + G+ + A      M + G+  +
Sbjct: 358 FCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVD 417

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           + ++ ALI      G +  A +++  M+  GI PD   YN+L+      G + +A  +  
Sbjct: 418 MISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLT 477

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
           EML + I PD   Y  L+ G    GN+ EA+++F  I   GL    + + ++ K + +  
Sbjct: 478 EMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSG 537

Query: 556 ESDKA 560
             D A
Sbjct: 538 MMDNA 542



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 89/406 (21%), Positives = 162/406 (39%), Gaps = 87/406 (21%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE D   + A+I  L + G++ TAL +R +M+ +G +PD   +N L+N L K G L  A 
Sbjct: 414 LEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAK 473

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM +   +P+   Y   + G+ R   LD+A  LF  +   G+ P  V +N+++   
Sbjct: 474 VMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGF 533

Query: 234 CKKGLLGDAV-----------------------------------KFLGEVLADDDGKAT 258
            K G++ +A+                                   K  G ++  +     
Sbjct: 534 SKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN---CK 590

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            +V+T T L++ Y + G+   A  L++ M    ++  +V Y++LI  FC    +  A +Y
Sbjct: 591 PNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSY 650

Query: 319 F-------------------------------------------------CQMLKRGFLP 329
           F                                                  +M+  G+  
Sbjct: 651 FELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQ 710

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
               YN +L CLC+Q  +  A      +   G+  D +S+  +I G+C+ G+  + R  +
Sbjct: 711 KAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMI 770

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
              L +  +     +++ +D +   G +S A  I   M+   VS N
Sbjct: 771 SCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPN 816



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 101/274 (36%), Gaps = 74/274 (27%)

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVL----SKTGVAPDQISYKTIIQGLCIHGDIV 383
           LP     N+LLN L K  +++ A   Y  +    +   +  D  +   +++GLC+ G I 
Sbjct: 166 LPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIE 225

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
              + + S   K  VP    +N +ID  G C                             
Sbjct: 226 DGIKLIESRWGKGCVPNIVFYNTLID--GYC----------------------------- 254

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G +  A+ L K++ + G  P + T+  L+   C +G       L  EM  RG++
Sbjct: 255 ----KKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLS 310

Query: 504 -----------------------------------PDIITYTELIKGHCARGNMKEAEEV 528
                                              PD++TY  LI   C+RG ++EAE++
Sbjct: 311 VNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKL 370

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             +    GLA + + +  L   Y +  E  KA D
Sbjct: 371 LEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATD 404


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 212/448 (47%), Gaps = 39/448 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R+L   G+    L + + M+ +  + +    N  ++ LCK   ++KA+   +E+ + R
Sbjct: 37  LVRELSKAGRAEECLKVVKLMLDRQQLRERHLVNITIDSLCKSDMIDKAESWFQELKDFR 96

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  +YN  I  +C+   +D+A+ LF  M   G  P+  T+N L+  LC+   LG+A 
Sbjct: 97  GLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQ 156

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +F   +L+   G +                                       + YN+L+
Sbjct: 157 QFYERLLSSGAGAS--------------------------------------FITYNILV 178

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GFC    +  A     +++ RG +     YN +++ L K+GK+ EA  F+  + K GV 
Sbjct: 179 DGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVR 238

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P ++++  +I GLC    + +A+E   S LE    P   I + ++DG+ + G +  A+ I
Sbjct: 239 PQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRI 298

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            +LM + G + N  + N LI    +   +  A  + +E++     PDV TY+  +   C 
Sbjct: 299 FELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCR 358

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF-AKIQTLGLAIDHI 542
              +  A Q+   ++ +G TPD++ YT LI G C+ G + EA +VF   ++  G A ++ 
Sbjct: 359 AHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNF 418

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLR 570
              +L   +      D+AR++ Q+++ R
Sbjct: 419 TCNVLVNGFGLAGRLDEARELFQRFVER 446



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 205/425 (48%), Gaps = 21/425 (4%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVA--VIRDLCLGGKIGTA-LWLRRKMIQKGTVP 151
           +E L  +K M D   +R        RH+    I  LC    I  A  W +     +G V 
Sbjct: 48  EECLKVVKLMLDRQQLR-------ERHLVNITIDSLCKSDMIDKAESWFQELKDFRGLV- 99

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           + +++N L+N  CK   +++A  +  EM     +P+ +TYN  I G CRV  L +A   +
Sbjct: 100 NTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFY 159

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST---ILM 268
             + ++G   + +T+NILV   CK   + +AV+ L E++A         V+TS     ++
Sbjct: 160 ERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVA------RGGVVTSAPYNCII 213

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           D+ FK G   +A   +N M +  ++   V + VLI+G C    ++ A   F   L+ G  
Sbjct: 214 DTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGS 273

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P V+  + L++  CK G +DEA   + +++  G  P+ +S   +I GLC    + +ARE 
Sbjct: 274 PSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREV 333

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              ++++   P+   ++  +DG  R   +  A  +  +++  G + +V  + ALI     
Sbjct: 334 FEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCS 393

Query: 449 GGSIFDAFSL-KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
            G + +A  + + +M   G  P+ FT N+L+      G +  A +L+   + RG+ PD  
Sbjct: 394 LGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCR 453

Query: 508 TYTEL 512
           T++ +
Sbjct: 454 TFSAM 458



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 110/269 (40%), Gaps = 50/269 (18%)

Query: 107 TGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI 166
           + P  C ++T +++           GKI  A     +M + G  P  +T   L++ LCK 
Sbjct: 206 SAPYNCIIDTLFKK-----------GKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKA 254

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
             + +A  +     E   SP+    +  + G+C+   +D+A  +F  M N G  PN V+ 
Sbjct: 255 NRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSC 314

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           NIL++ LCK   L  A +   EV+     +A  DV+T +  MD   +     QA  +   
Sbjct: 315 NILINGLCKAKRLSQAREVFEEVVKR---QAKPDVVTYSTFMDGLCRAHRVDQARQVLCM 371

Query: 287 MFQKNIQTDIVAY------------------------------------NVLINGFCLNG 310
           +  K    D+V Y                                    NVL+NGF L G
Sbjct: 372 LVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAG 431

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            +  A   F + ++RG  PD  T++ + N
Sbjct: 432 RLDEARELFQRFVERGVQPDCRTFSAMAN 460


>gi|414871052|tpg|DAA49609.1| TPA: hypothetical protein ZEAMMB73_878928 [Zea mays]
          Length = 807

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 229/458 (50%), Gaps = 6/458 (1%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADH 174
           +DY  H  +I  LC  GKIG AL   ++  ++G   P  +T N L++ LC  G ++ A  
Sbjct: 213 SDYS-HGILIDGLCKQGKIGEALSFLQETRKEGKFKPLGMTFNTLMSALCNWGFIQDAKS 271

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V   M +   +P+  TY+  I G C+V  +++A  +F ++   G+  + VT N L++   
Sbjct: 272 VFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNSLINGFR 331

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G   +  K + E++         DV+T TIL+  + + GD  + + +  D+  + I+ 
Sbjct: 332 LHGHTREIPKMI-EMMRGLG--VEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQGIEL 388

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           +IV Y+VLIN     G        F ++   G   DVI Y+ L++  CK G++  A   +
Sbjct: 389 NIVTYSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGRALQVW 448

Query: 355 GVL-SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
            ++     V P  +++ +I+ GLC  G + +AR +L ++  K    +  ++NV+IDGY +
Sbjct: 449 NLMCCSQRVIPTSVNHVSILLGLCKKGFLDEARSYLETVASKYQPSDVVLYNVVIDGYAK 508

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            GD+ NA  + D ++  G+   + T N+L+    + G +  A S    + L  + P   T
Sbjct: 509 VGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFMAIQLSDLLPTTVT 568

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  L+ A    G +H  L ++ EM  +GI P+ ITY+ +IKG C +    +A+ V   + 
Sbjct: 569 YTTLMDALSEAGKVHSMLSIFKEMTGKGIRPNAITYSVVIKGLCKQLMFHDAKNVLDDMY 628

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             G   D IP+  L + +   +++  A  +++  + R 
Sbjct: 629 REGFDADPIPYNTLIQGFCETQDAKNAFYVYELMVCRG 666



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 220/464 (47%), Gaps = 9/464 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E    ++ MR  G     +E D   +  +I   C GG +   + +R+ ++ +G   +++
Sbjct: 337 REIPKMIEMMRGLG-----VEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQGIELNIV 391

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++ L+N L K G   + +++  E+  +    +   Y+  I G+C++ E+ +AL +++ M
Sbjct: 392 TYSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGRALQVWNLM 451

Query: 215 -ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
             +  + P  V H  ++  LCKKG L +A  +L  V +       SDV+   +++D Y K
Sbjct: 452 CCSQRVIPTSVNHVSILLGLCKKGFLDEARSYLETVASK---YQPSDVVLYNVVIDGYAK 508

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            GD   A+ L++ +    +   IV  N L+ G+C  GD+  A +YF  +     LP  +T
Sbjct: 509 VGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFMAIQLSDLLPTTVT 568

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y TL++ L + GK+      +  ++  G+ P+ I+Y  +I+GLC       A+  L  M 
Sbjct: 569 YTTLMDALSEAGKVHSMLSIFKEMTGKGIRPNAITYSVVIKGLCKQLMFHDAKNVLDDMY 628

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            +    +P  +N +I G+    D  NAF + +LM+  GV  +  T+N L+      G + 
Sbjct: 629 REGFDADPIPYNTLIQGFCETQDAKNAFYVYELMVCRGVMPSPVTYNLLVNVLCLKGLVI 688

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A    +     G     F Y  LI A C  G  + A+    ++L  G    I  ++  I
Sbjct: 689 HAEMKLESFRKQGAELRKFAYTTLIKAQCAKGMPYKAIMWVGKLLDAGFEASIEDFSAAI 748

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
              C R   +EA  + + + ++G+  D   +R+L    ++  ES
Sbjct: 749 NRLCKRQFTREALMLISIMLSVGVYPDIQLYRVLGTAVQKKNES 792



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 185/394 (46%), Gaps = 41/394 (10%)

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A +V+ +M+ +    +  TY++ +     + + D AL +F  M + GI P+  +H IL+ 
Sbjct: 166 ALYVLSKMNSLNMQISITTYDSLLYS---LRKADVALAIFKEMESCGIPPSDYSHGILID 222

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            LCK+G +G+A+ FL E                        +   KF+ L +        
Sbjct: 223 GLCKQGKIGEALSFLQET-----------------------RKEGKFKPLGM-------- 251

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
                  +N L++  C  G I  A + FC MLK G  P   TY+T+++ LCK G ++EA 
Sbjct: 252 ------TFNTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAF 305

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
             +  +++ G+  D ++  ++I G  +HG   +  + +  M    V P+   + ++I G+
Sbjct: 306 DIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDVVTYTILITGH 365

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
              GD+     IR  +L  G+  N+ T++ LI A  + G  ++  +L  E+   G+  DV
Sbjct: 366 CEGGDVEEGMRIRKDILGQGIELNIVTYSVLINALFKKGLFYEVENLFGEICSIGLELDV 425

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEM-LRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             Y++LI   C LG I  ALQ+++ M   + + P  + +  ++ G C +G + EA     
Sbjct: 426 IAYSILIHGFCKLGEIGRALQVWNLMCCSQRVIPTSVNHVSILLGLCKKGFLDEARSYLE 485

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
            + +     D + + ++   Y ++ +   A  ++
Sbjct: 486 TVASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLY 519



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 147/306 (48%), Gaps = 4/306 (1%)

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           S  I    L +SY +      AL + + M   N+Q  I  Y+ L+       D+  A A 
Sbjct: 145 SSSIVWDALANSYARAQMNHDALYVLSKMNSLNMQISITTYDSLLYSL-RKADV--ALAI 201

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG-VAPDQISYKTIIQGLC 377
           F +M   G  P   ++  L++ LCKQGK+ EA  F     K G   P  +++ T++  LC
Sbjct: 202 FKEMESCGIPPSDYSHGILIDGLCKQGKIGEALSFLQETRKEGKFKPLGMTFNTLMSALC 261

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G I  A+     ML+  + P  H ++ II G  + G ++ AF I   +   G+  ++ 
Sbjct: 262 NWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIV 321

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T N+LI      G   +   + + M   G+ PDV TY +LI   C  G +   +++  ++
Sbjct: 322 TCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDI 381

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
           L +GI  +I+TY+ LI     +G   E E +F +I ++GL +D I + IL   + ++ E 
Sbjct: 382 LGQGIELNIVTYSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEI 441

Query: 558 DKARDI 563
            +A  +
Sbjct: 442 GRALQV 447


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 213/458 (46%), Gaps = 19/458 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ L   G I  AL L  +M+  G  P+  T+N L++ LCK G    A  +  EM +  
Sbjct: 178 ILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRG 237

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN   Y   ++  C   ++D+A+ L  +M + G  P+ VT+N  +  LCK G + +A 
Sbjct: 238 IMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAF 297

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L  V+  D G A   +   + L+D  F+     +    +  M ++NI  D+V Y ++I
Sbjct: 298 QRL--VMLQDGGFALG-LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMI 354

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G    G I  A ++   M K+GF+PD   YNT+L  LC  G L+ A      + +  + 
Sbjct: 355 RGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLV 414

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D  +   +I GLC  G + +A +    M E    P    +N +IDG+ R G L  A  +
Sbjct: 415 LDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARML 474

Query: 424 ---------RDLMLSFGVSSNVF----TFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
                      L L   + +N      +   L+    + G +  A+ L + ++  G+ PD
Sbjct: 475 FHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPD 534

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V TYN LI   C   ++  A++L+ E+  +GI+PD ITY  LI G        +A  +F 
Sbjct: 535 VVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQ 594

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            I   G +     +  + +   RMK+  +A ++   WL
Sbjct: 595 NILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL---WL 629



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 202/456 (44%), Gaps = 26/456 (5%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G+   A+    +M +  + P    +N ++  L   G +  A  +   M     +PN AT
Sbjct: 150 AGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRAT 209

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  + G C+      AL +F  M + GI PN   + +L+ +LC  G + +AV+ LG + 
Sbjct: 210 YNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSM- 268

Query: 251 ADDDGKATSDVITSTILMDSYFKNG---DKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
              D     D +T    +    K G   + FQ L +  D         +  Y+ LI+G  
Sbjct: 269 --KDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQD---GGFALGLKGYSCLIDGLF 323

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
                   F Y+  ML+R   PDV+ Y  ++    + G++++A  F  V+ K G  PD  
Sbjct: 324 QARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTF 383

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            Y T+++ LC HGD+ +A      ML+ ++V +     ++I G  + G +  A  I D M
Sbjct: 384 CYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEM 443

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS------ 481
              G    V T+NALI    R G + +A  L  +M + G  P +F   L +GA+      
Sbjct: 444 GEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM-GNNPSLF-LRLTLGANQVCDSE 501

Query: 482 ---------CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
                    C  G +  A +L   ++  G+ PD++TY  LI G C   N+  A  +F ++
Sbjct: 502 SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKEL 561

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           Q  G++ D I +  L     R    + A  + Q  L
Sbjct: 562 QLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNIL 597



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 156/354 (44%), Gaps = 3/354 (0%)

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G+  +      LV A    G   DAV+    +   D+ ++         ++ +   +G  
Sbjct: 132 GLPASSSAFAALVAAHSSAGRNADAVQAFSRM---DEFQSRPTAFVYNTILKALVDSGVI 188

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             ALAL+N M       +   YNVL++G C  G    A   F +ML RG +P+V  Y  L
Sbjct: 189 LLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVL 248

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           L+ LC  GK+DEA    G +   G  PD+++Y   + GLC  G + +A + L+ + +   
Sbjct: 249 LSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGF 308

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
                 ++ +IDG  +       F     ML   +S +V  +  +I      G I DA S
Sbjct: 309 ALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALS 368

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
               M   G  PD F YN ++   C+ G +  A  L  EML+  +  D  T T +I G C
Sbjct: 369 FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLC 428

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            RG + EA ++F ++   G     + +  L   + R    ++AR +  K  + N
Sbjct: 429 KRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGN 482



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 183/397 (46%), Gaps = 24/397 (6%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++  LC  GKI  A+ L   M  KG +PD +T+N  ++ LCK+G + +A   +  + 
Sbjct: 245 YTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   +     Y+  I G  +    D+    + TM    I P+ V + I++    + G + 
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFK----NGDKFQALALWNDMFQKNIQTDI 296
           DA+ FL       D       +  T   ++  K    +GD  +A  L ++M Q N+  D 
Sbjct: 365 DALSFL-------DVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDS 417

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY-- 354
               ++I G C  G +  A   F +M + G  P V+TYN L++   ++G+L+EA   +  
Sbjct: 418 TTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHK 477

Query: 355 -------GVLSKTGVAPDQI----SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
                   +  +  +  +Q+    S + ++  +C  G ++KA + L S+++  VVP+   
Sbjct: 478 MEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVT 537

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N +I+G  +  +L  A  +   +   G+S +  T+  LI    R     DA  L + +L
Sbjct: 538 YNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNIL 597

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
             G  P +  YN ++ + C +  +  A+ L+ + L +
Sbjct: 598 QSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK 634



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 156/349 (44%), Gaps = 15/349 (4%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   +  +IR     G+I  AL     M +KG VPD   +N ++  LC  GDLE+A 
Sbjct: 343 ISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAH 402

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  EM +     +  T    I G C+   +D+A+ +F  M  +G  P  +T+N L+   
Sbjct: 403 TLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGF 462

Query: 234 CKKGLLGDAVKFLGEVLADDD----------GKATSDVITSTILMDSYFKNGDKFQALAL 283
            ++G L +A     ++   ++               D  +   L+    ++G   +A  L
Sbjct: 463 YREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKL 522

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
              +    +  D+V YN LING C   ++  A   F ++  +G  PD ITY TL++ L +
Sbjct: 523 LRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
             + ++A   +  + ++G +P    Y ++++ LC    + +A    L  L K     P  
Sbjct: 583 AHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKK-YNFPVE 641

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLM---LSFG-VSSNVFTFNALILAETR 448
             V+ + +    D S    +R+L+     +G +SSN +T   + L + R
Sbjct: 642 SEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVR 690


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 209/437 (47%), Gaps = 12/437 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR LC  GK+  A  L  +M+ +G  P VLT  +L+N LCK G+LE A   +R   +M 
Sbjct: 131 LIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELA---LRYFEKMS 187

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P  AT+   I G  R   +D+A + F  M +  I PN  T+ ++++ L K G + +A 
Sbjct: 188 SIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAE 246

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E+        TS       ++  + K GD  +A  L  DM +K  Q D + YN LI
Sbjct: 247 RVLQEMPVPTLANYTS-------VIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLI 299

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL-SKTGV 362
           +G C   +I  A+    +M    F+PD+ TY+ L+  LC+  +L EA    G L ++   
Sbjct: 300 HGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDC 359

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ +SY T+I G      +  A +  L M+     P+   ++ +I G    G  S A S
Sbjct: 360 TPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHS 419

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
             + M+   +   V  ++++I    R G +  A ++   M+ +G  P++  YN LI   C
Sbjct: 420 YLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLC 479

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +  A     EM  RG +PD +TY  LI G C      EA +++ +    G+ I   
Sbjct: 480 KTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISET 539

Query: 543 PFRILKKRYRRMKESDK 559
              ++    R ++++ +
Sbjct: 540 SCNVVIASLRCLEQAQR 556



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 220/484 (45%), Gaps = 43/484 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  VI  L   GK+  A     +++Q+  VP +  +  ++   CK GD+ KA H++ +M 
Sbjct: 229 YTVVINGLVKAGKVAEA----ERVLQEMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMK 284

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                 +  TYN  I G+CR+ E+D+A  L   M +N   P+  T++IL+  LC+   L 
Sbjct: 285 RKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLS 344

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A   LG +  +DD   T +V++   L+D + K      A  L+ +M       D+V Y+
Sbjct: 345 EARDLLGTLRNEDD--CTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYS 402

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI G C  G  S A +Y  +M+ +  LP V  Y+++++ LC+ G+LD AS  +  +   
Sbjct: 403 TLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVAN 462

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD---- 416
           G  P+   Y ++I GLC  G +  A+  +  M E+   P+   +  +I G  R       
Sbjct: 463 GCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEA 522

Query: 417 ----------------------------LSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
                                       L  A  +  ++L+ G S   F +  +I +  +
Sbjct: 523 CDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCK 582

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
             ++ +A  L ++M+  GI PD  T + L+GA C      +A+   +EM+R G  P + T
Sbjct: 583 ENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGT 642

Query: 509 YTELIKGHCARGNMKEAEEVFAK-IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ-- 565
           Y+ L+      G   EA  V  + I       D + +  L   Y    + ++AR++ Q  
Sbjct: 643 YSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQEL 702

Query: 566 --KW 567
             KW
Sbjct: 703 KSKW 706



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 179/381 (46%), Gaps = 18/381 (4%)

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V T+N     L + G  E+A  + +E       P+  TY   I G C   +L  A  L+ 
Sbjct: 90  VHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYE 149

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M + G+RP  +T   L++ALCK G L  A+++  ++       +     T TIL+D  F
Sbjct: 150 EMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKM------SSIPCAATWTILIDGLF 203

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           +     +A   + +M    I  +   Y V+ING    G ++ A     ++L+   +P + 
Sbjct: 204 RAIRVDEACYYFEEMKHTAIPNNWT-YTVVINGLVKAGKVAEAE----RVLQEMPVPTLA 258

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            Y +++   CK G + +A H    + + G   D ++Y T+I G C   +I +A E L  M
Sbjct: 259 NYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEM 318

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF----GVSSNVFTFNALILAETR 448
                VP+   ++++I G  R   LS A   RDL+ +       + NV ++N LI   ++
Sbjct: 319 KSNDFVPDIFTYDILIAGLCRAKRLSEA---RDLLGTLRNEDDCTPNVVSYNTLIDGFSK 375

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
              + DA+ L  EM+  G  PDV TY+ LI   CN G    A    +EM+ + I P +  
Sbjct: 376 AARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPV 435

Query: 509 YTELIKGHCARGNMKEAEEVF 529
           Y+ +I G C  G +  A  VF
Sbjct: 436 YSSVISGLCRAGELDAASTVF 456



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 165/385 (42%), Gaps = 47/385 (12%)

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
           +M  NG    R+   +++H + K G    A+ F G      D + T  V T     ++  
Sbjct: 48  SMKWNGQLSQRLV-GVILH-MVKNG--ESAMVFFGWAGTRQDFRHT--VHTYNCFYEALI 101

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           + G   +A  L+ + + + +  D + Y +LI G C  G +  A + + +M+ RG  P V+
Sbjct: 102 RTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVL 161

Query: 333 TYNTLLNCLCKQGKL--------------------------------DEASHFYGVLSKT 360
           T   LLN LCK G L                                DEA +++  +  T
Sbjct: 162 TCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHT 221

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            + P+  +Y  +I GL   G + +A   L  M     VP    +  +I G+ + GD+  A
Sbjct: 222 AI-PNNWTYTVVINGLVKAGKVAEAERVLQEM----PVPTLANYTSVIGGHCKAGDMGKA 276

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           + + + M   G   +  T+N LI    R   I  A+ L +EM  +   PD+FTY++LI  
Sbjct: 277 YHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAG 336

Query: 481 SCNLGHIHLALQLYDEMLRR-GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
            C    +  A  L   +      TP++++Y  LI G      + +A ++F ++ T G   
Sbjct: 337 LCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHP 396

Query: 540 DHIPFRILKKRYRRMKESDKARDIH 564
           D + +  L    R +  + +A + H
Sbjct: 397 DVVTYSTL---IRGLCNAGRASEAH 418



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 154/379 (40%), Gaps = 36/379 (9%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +IR LC  G+   A     +M+ K  +P V  ++ +++ LC+ G+L+ A  V 
Sbjct: 397 DVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVF 456

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK- 235
             M      PN A YN+ I G C+   L  A      M   G  P+ VT+  L+  LC+ 
Sbjct: 457 DSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRW 516

Query: 236 ---------------KGL----------------LGDAVKFLGEVLADDDGKATSDVITS 264
                          +G+                L  A + L  VLA   G + +    +
Sbjct: 517 SRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLA--TGNSPTAFFYA 574

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T++ +S  K  +  +A  L  DM    I+ D    + L+   C       A A+  +M++
Sbjct: 575 TVI-ESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVR 633

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEAS-HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            G  P V TY+TLLN L K GK  EA      ++S T   PD++ Y  +I        + 
Sbjct: 634 LGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVE 693

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +AR  L  +  K  +     +N ++ G  R  +L   + +   M       N  TFN LI
Sbjct: 694 EARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILI 753

Query: 444 LAETRGGSIFDAFSLKKEM 462
               R G    A  +  EM
Sbjct: 754 QGFCRLGQTDRAVRVLSEM 772


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 205/419 (48%), Gaps = 4/419 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C+ G +  A+  R  ++ KG   D  ++  L+N LCK G    A  ++++M E 
Sbjct: 130 TLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEED 189

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY+  I G C+   +  AL LFS + + GI  + V +N L+H  C  G   +A
Sbjct: 190 LVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREA 249

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L  ++    G    D  T  IL+D+  K G   +A  ++  M ++  + DIV YN L
Sbjct: 250 TRLLTMMVR---GNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNAL 306

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + GFCL+ ++S A   F +M+KRG  PDV+ YN L+N  CK   +DEA   +  +    +
Sbjct: 307 MEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNL 366

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+  +Y ++I GLC  G +   +E +  M ++   P+   +N+ +D + +      A S
Sbjct: 367 VPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAIS 426

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   ++  G+  + + ++ ++    +G  +  A    + +L+ G  P+V TY ++I A C
Sbjct: 427 LFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALC 485

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
                  A+ L  +M      PD +T+  +I     R    +AE++  ++   GL  D 
Sbjct: 486 KDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDE 544



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 208/427 (48%), Gaps = 4/427 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M++K   P +   + L+  + ++G    A  +  ++     +P+ AT    I  YC   
Sbjct: 45  RMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQA 104

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            L  A  L  T+   G +PN VT N L++  C  G++  A+ F  +++A        D  
Sbjct: 105 HLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG---YPLDEF 161

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           +   L++   KNG    AL L   M +  ++ +++ Y+ +I+G C +  I+ A   F  +
Sbjct: 162 SYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLV 221

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
             RG L DV+ YN+L++  C  G+  EA+    ++ +  + PD  ++  ++  LC  G I
Sbjct: 222 TSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRI 281

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
           V+A+     M+++   P+   +N +++G+    ++S A  + + M+  G+  +V  +N L
Sbjct: 282 VEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVL 341

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    +   + +A  L KE+    + P++ TYN LI   C LG +    +L DEM  RG 
Sbjct: 342 INGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQ 401

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
           +PDI+TY   +   C     ++A  +F +I   G+  D   + ++ + + + ++   A +
Sbjct: 402 SPDIVTYNIFLDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEE 460

Query: 563 IHQKWLL 569
             Q  L+
Sbjct: 461 ALQHLLI 467



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 200/405 (49%), Gaps = 4/405 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G   TA+ L  ++  KG  P + T   L+N  C    L  A  ++  + +M   PN  T+
Sbjct: 69  GHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTF 128

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I G+C    + KA+     +   G   +  ++  L++ LCK G   DA++ L ++  
Sbjct: 129 NTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKM-- 186

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            ++     ++IT + ++D   K+     AL L++ +  + I  D+VAYN LI+G C  G 
Sbjct: 187 -EEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQ 245

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A      M++    PD  T+N L++ LCK+G++ EA   + V+ K G  PD ++Y  
Sbjct: 246 WREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNA 305

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +++G C+  ++ +ARE    M+++ + P+   +NV+I+GY +   +  A  +   +    
Sbjct: 306 LMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKN 365

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N+ T+N+LI    + G +     L  EM   G  PD+ TYN+ + A C       A+
Sbjct: 366 LVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAI 425

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            L+ +++ +GI PD   Y  +++  C    +K AEE    +   G
Sbjct: 426 SLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHG 469



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 159/305 (52%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+ +  + G    A++L++ +  K I   I    +LIN +C    +S AF+    +LK G
Sbjct: 61  LLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMG 120

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           F P+++T+NTL+N  C  G + +A  F   L   G   D+ SY ++I GLC +G    A 
Sbjct: 121 FQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDAL 180

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + L  M E  V P    ++ +IDG  +   +++A  +  L+ S G+  +V  +N+LI   
Sbjct: 181 QLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGC 240

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G   +A  L   M+   I PD +T+N+L+ A C  G I  A  ++  M++RG  PDI
Sbjct: 241 CSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDI 300

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +TY  L++G C   N+ EA E+F ++   GL  D + + +L   Y ++   D+A  + ++
Sbjct: 301 VTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKE 360

Query: 567 WLLRN 571
              +N
Sbjct: 361 IRCKN 365



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 165/334 (49%), Gaps = 3/334 (0%)

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           + + +D  L  F+ M      P     + L+ A+ + G    A+    ++ +      T 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKG---ITP 88

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
            + T TIL++ Y        A +L   + +   Q ++V +N LINGFC+NG +S A A+ 
Sbjct: 89  SIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFR 148

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             ++ +G+  D  +Y +L+N LCK G+  +A      + +  V P+ I+Y T+I GLC  
Sbjct: 149 LDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKD 208

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
             I  A      +  + ++ +   +N +I G    G    A  +  +M+   ++ + +TF
Sbjct: 209 RLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTF 268

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N L+ A  + G I +A  +   M+  G  PD+ TYN L+   C   ++  A +L++ M++
Sbjct: 269 NILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVK 328

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           RG+ PD++ Y  LI G+C    + EA  +F +I+
Sbjct: 329 RGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIR 362



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 146/299 (48%), Gaps = 8/299 (2%)

Query: 100 RLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYL 159
           RL TM     VR  +  D      ++  LC  G+I  A  +   M+++G  PD++T+N L
Sbjct: 251 RLLTMM----VRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNAL 306

Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
           +   C   ++ +A  +   M +    P+   YN  I GYC+++ +D+A+ LF  +    +
Sbjct: 307 MEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNL 366

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            PN  T+N L+  LCK G +    + + E+    D   + D++T  I +D++ K+    +
Sbjct: 367 VPNLATYNSLIDGLCKLGRMSCVQELVDEMC---DRGQSPDIVTYNIFLDAFCKSKPYEK 423

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A++L+  + Q  I  D   Y+V++  FC    +  A      +L  G  P+V TY  ++N
Sbjct: 424 AISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMIN 482

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
            LCK    DEA      +      PD ++++TII  L    +  KA +  L M+E+ +V
Sbjct: 483 ALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLV 541


>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 647

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 186/394 (47%), Gaps = 4/394 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +   LW+ R+M + G  P + ++N+LVN L     +E A+ V   M   +  P+  TY
Sbjct: 193 GMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTY 252

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYC V +  KA      M    + P+++T+  L+ A   +G     +    E+  
Sbjct: 253 NTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEM-- 310

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
           D+ G      + S +++    K+G + +   ++ +M  K  + ++  Y  LI+     G+
Sbjct: 311 DEKGLEIPPHVYS-LVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGN 369

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F +M K G  PD +TY  ++N LCK G+LDEA  +    S  GVA + + Y +
Sbjct: 370 MGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSS 429

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GL   G + +A      M++K   P+ + +N +ID   +CG +  A ++   M   G
Sbjct: 430 LIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDG 489

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
               V+T+  LI    R     +A +L   M+  GI P    +  L    C  G +  A 
Sbjct: 490 CDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARAC 549

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           ++ DEM   G+ P+   + ++I   C  G +KEA
Sbjct: 550 KILDEMAPMGVIPE-TAFDDMINILCKAGRIKEA 582



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 197/417 (47%), Gaps = 3/417 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +V++I  L   G + +   +  K  + G +  V + N L+     +G +E+   V R M 
Sbjct: 147 YVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMK 206

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    P+  +YN  + G      ++ A  +F  M N  I P+ VT+N ++   C+   +G
Sbjct: 207 ENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCE---VG 263

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
              K   ++ A +      D IT   L+ + +  GD    L L+++M +K ++     Y+
Sbjct: 264 KTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYS 323

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           ++I G C +G     +  F  M+ +G   +V  Y  L++   K G + EA   +  + K 
Sbjct: 324 LVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKE 383

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ PD+++Y  I+  LC  G + +A E++     K V      ++ +IDG G+ G +  A
Sbjct: 384 GLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEA 443

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             I   M+  G   + + +NALI A  + G I +A +L K M +DG    V+TY +LI  
Sbjct: 444 ERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITG 503

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
                    AL L+D M+ +GITP    +  L  G C  G +  A ++  ++  +G+
Sbjct: 504 LFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGV 560



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 181/383 (47%), Gaps = 16/383 (4%)

Query: 193 AFITGYCRVNEL----DKALHLFSTMANNGIRPNRVTHNI-----LVHALCKKGLLGDAV 243
           +F++   R  EL    D A+  F+       +  + THN+     L+  L   G+L D+V
Sbjct: 109 SFVSFILRSTELQTKPDVAIRFFTWAG----KQKKYTHNLECYVSLIDVLATNGVL-DSV 163

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K +     +     T  V +S  L+ S+   G   + L +W  M +  I+  + +YN L+
Sbjct: 164 KSVFSKFKEMGLIMT--VYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLV 221

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG   +  I SA   F  M      PDV+TYNT++   C+ GK  +A      +    VA
Sbjct: 222 NGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVA 281

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD+I+Y T+IQ     GD          M EK +   PH+++++I G  + G     +++
Sbjct: 282 PDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTV 341

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M+S G  +NV  + ALI +  + G++ +A  L K M  +G+ PD  TY +++ + C 
Sbjct: 342 FENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCK 401

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  AL+  +    +G+  + + Y+ LI G    G + EAE +F ++   G   D   
Sbjct: 402 SGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYC 461

Query: 544 FRILKKRYRRMKESDKARDIHQK 566
           +  L     +  + D+A  + ++
Sbjct: 462 YNALIDALAKCGKIDEALALSKR 484



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 116/237 (48%), Gaps = 5/237 (2%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +G A+ L ++M ++G  PD +T+  +VN LCK G L++A   +   S    + N   Y
Sbjct: 368 GNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFY 427

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           ++ I G  +   +D+A  +F  M   G  P+   +N L+ AL K G + +A+     +  
Sbjct: 428 SSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEV 487

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
           D        V T TIL+   F+     +AL LW+ M  K I     A+  L  G CL+G 
Sbjct: 488 DG---CDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGK 544

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY-GVLSKTGVAPDQI 367
           ++ A     +M   G +P+   ++ ++N LCK G++ EA     G++ +    P ++
Sbjct: 545 VARACKILDEMAPMGVIPET-AFDDMINILCKAGRIKEACKLADGIVDRGREIPGRV 600



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 143/308 (46%), Gaps = 12/308 (3%)

Query: 95  KENLDRLKTM--RDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           ++  ++LK M  R+  P + T       ++ +I+     G   + L L  +M +KG    
Sbjct: 266 RKAFEKLKAMELRNVAPDKIT-------YMTLIQACYAEGDFDSCLGLYHEMDEKGLEIP 318

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
              ++ ++  LCK G   +   V   M       N A Y A I    +   + +A+ LF 
Sbjct: 319 PHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFK 378

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M   G+ P+ VT+ ++V++LCK G L +A++++        G A + +  S+ L+D   
Sbjct: 379 RMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYME--FCSGKGVAVNAMFYSS-LIDGLG 435

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K+G   +A  ++ +M +K    D   YN LI+     G I  A A   +M   G    V 
Sbjct: 436 KSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVY 495

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TY  L+  L ++ + +EA   + ++   G+ P   +++ +  GLC+ G + +A + L  M
Sbjct: 496 TYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEM 555

Query: 393 LEKSVVPE 400
               V+PE
Sbjct: 556 APMGVIPE 563


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 218/446 (48%), Gaps = 3/446 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ LC  GKI     L +    K  VP V+ +N +++  CK GDL+ A   + E+    
Sbjct: 211 MVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKG 270

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P   TY A I G+C+  E +    L + MA  G+  N    N ++ A  K GL+ +A 
Sbjct: 271 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAA 330

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L  +     G    D+ T  I+++   K G   +A  L     ++ +  +  +Y  L+
Sbjct: 331 EMLRRMAEMGCG---PDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLM 387

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           + +C  GD   A     ++ + G   D+++Y   ++ +   G++D A      + + GV 
Sbjct: 388 HAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVF 447

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD   Y  ++ GLC  G I   +  L  ML+++V P+ +++  +IDG+ R G+L  A  I
Sbjct: 448 PDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKI 507

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
             +++  GV   +  +NA+I    + G + DA S   EM      PD +TY+ +I     
Sbjct: 508 FKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVK 567

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              +  AL+++ +M++    P++ITYT LI G C + +M  AE+VF+ +++  L  + + 
Sbjct: 568 QHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVT 627

Query: 544 FRILKKRYRRMKESDKARDIHQKWLL 569
           +  L   + +  + ++A  I +  L+
Sbjct: 628 YTTLVGGFFKAGKPERATSIFELMLM 653



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 199/419 (47%), Gaps = 23/419 (5%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C GG+I  A  L  K  ++G +P+  ++  L++  CK GD  KA  ++  ++E+    + 
Sbjct: 356 CKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDL 415

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            +Y AFI G     E+D AL +   M   G+ P+   +NIL+  LCKKG +      L E
Sbjct: 416 VSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSE 475

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +L   D     DV     L+D + +NG+  +A+ ++  + +K +   IV YN +I GFC 
Sbjct: 476 ML---DRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCK 532

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G ++ A +   +M      PD  TY+T+++   KQ  +  A   +G + K    P+ I+
Sbjct: 533 FGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVIT 592

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y ++I G C   D+++A +    M    +VP    +  ++ G+ + G    A SI +LML
Sbjct: 593 YTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELML 652

Query: 429 SFGVSSNVFTFNALILAETRGGS-----------------IFDAFSLKKEMLLDGIFPDV 471
             G   N  TF+ LI   T   +                 I D F++   MLLDG    +
Sbjct: 653 MNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTM---MLLDGWDQVI 709

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             YN +I   C  G +  A  L  +ML +G   D + +T L+ G C +G  KE   + +
Sbjct: 710 AAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIIS 768



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 183/393 (46%), Gaps = 3/393 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  G+      L  +M  +G   +V   N +++   K G + +A  ++R M+EM
Sbjct: 280 ALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEM 339

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  I   C+   +++A  L       G+ PN+ ++  L+HA CKKG   D 
Sbjct: 340 GCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKG---DY 396

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           VK  G +    +    SD+++    +      G+   AL +   M +K +  D   YN+L
Sbjct: 397 VKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNIL 456

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G C  G I +      +ML R   PDV  + TL++   + G+LDEA   + V+ + GV
Sbjct: 457 MSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGV 516

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  + Y  +I+G C  G +  A   L  M      P+ + ++ +IDGY +  D+S+A  
Sbjct: 517 DPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALK 576

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M+      NV T+ +LI    +   +  A  +   M    + P+V TY  L+G   
Sbjct: 577 MFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFF 636

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             G    A  +++ ML  G  P+  T+  LI G
Sbjct: 637 KAGKPERATSIFELMLMNGCLPNDATFHYLING 669



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 193/430 (44%), Gaps = 17/430 (3%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A  + R+M + G  PD+ T+N ++N  CK G +E+AD ++ +  E    PN  +Y
Sbjct: 324 GLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSY 383

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              +  YC+  +  KA  +   +A  G + + V++   +H +   G +  A+    +++ 
Sbjct: 384 TPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMM- 442

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     D     ILM    K G       L ++M  +N+Q D+  +  LI+GF  NG+
Sbjct: 443 --EKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGE 500

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F  ++++G  P ++ YN ++   CK GK+ +A      ++    APD+ +Y T
Sbjct: 501 LDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYST 560

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G     D+  A +    M++    P    +  +I+G+ +  D+  A  +   M SF 
Sbjct: 561 VIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFD 620

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG------ 485
           +  NV T+  L+    + G    A S+ + ML++G  P+  T++ LI    N        
Sbjct: 621 LVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLI 680

Query: 486 --------HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
                      L L  +  ML  G    I  Y  +I   C  G +  A+ +  K+ T G 
Sbjct: 681 EEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGF 740

Query: 538 AIDHIPFRIL 547
            ID + F  L
Sbjct: 741 LIDSVCFTAL 750



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 168/371 (45%), Gaps = 24/371 (6%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           ++D   + A I  + + G+I  AL +R KM++KG  PD   +N L++ LCK G +     
Sbjct: 412 KSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKL 471

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++ EM +    P+   +   I G+ R  ELD+A+ +F  +   G+ P  V +N ++   C
Sbjct: 472 LLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFC 531

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K G + DA+  L E+   +      D  T + ++D Y K  D   AL ++  M +   + 
Sbjct: 532 KFGKMTDALSCLNEM---NSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKP 588

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           +++ Y  LINGFC   D+  A   F  M     +P+V+TY TL+    K GK + A+  +
Sbjct: 589 NVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIF 648

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
            ++   G  P+  ++  +I GL                   +    P +   I +   + 
Sbjct: 649 ELMLMNGCLPNDATFHYLINGLT------------------NTATSPVL---IEEKDSKE 687

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
            + S       +ML  G    +  +N++I+   + G++  A  L  +ML  G   D   +
Sbjct: 688 NERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCF 747

Query: 475 NLLIGASCNLG 485
             L+   C+ G
Sbjct: 748 TALLHGLCHKG 758



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 154/349 (44%), Gaps = 29/349 (8%)

Query: 89  ALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKG 148
           A+ L+L E LDR             ++ D      +I      G++  A+ + + +I+KG
Sbjct: 468 AMKLLLSEMLDR------------NVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKG 515

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
             P ++ +N ++   CK G +  A   + EM+ +  +P+  TY+  I GY + +++  AL
Sbjct: 516 VDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSAL 575

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
            +F  M  +  +PN +T+  L++  CKK  +  A K    + + D      +V+T T L+
Sbjct: 576 KMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFD---LVPNVVTYTTLV 632

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC--------------LNGDISS 314
             +FK G   +A +++  M       +   ++ LING                   + S 
Sbjct: 633 GGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSL 692

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
              +F  ML  G+   +  YN+++ CLCK G +D A      +   G   D + +  ++ 
Sbjct: 693 ILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLH 752

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           GLC  G   + R  +   L K  +     +++ +D Y   G LS A  I
Sbjct: 753 GLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVI 801


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 219/485 (45%), Gaps = 75/485 (15%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT- 190
           GKI  A+ + R + + G  P+  T+   +  LC+ G+ E+A  V REM E   +PN  T 
Sbjct: 206 GKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTC 265

Query: 191 ----------------------------------YNAFITGYCRVNELDKALHLFSTMAN 216
                                             Y A I G+C   +L +A  +F  M N
Sbjct: 266 STYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVN 325

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL--------- 267
            GI P+   +  L+HA CK G L  AV    +++++  G  T+ VI S+IL         
Sbjct: 326 EGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSN--GIKTNCVIVSSILQCLCEMGMA 383

Query: 268 -------------------------MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                    +D+  K G   +A+ L N+M  + +  D+V Y  L
Sbjct: 384 SEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTL 443

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G+CL G +  A   F +M +RG  PD++TYN L+    + G   EA      +   G+
Sbjct: 444 IAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGL 503

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+  ++  II+GLC+ G + +A  FL ++ +K +      ++ ++DGY +      A+ 
Sbjct: 504 KPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCL----ENYSAMVDGYCKANFTRKAYE 559

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   +   G+     +   L+ +    G    A  L + ML   + P+   Y  LIGA C
Sbjct: 560 LFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFC 619

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +  A  ++D ++ RGITPD+ITYT +I G+C    ++EA ++F  ++  G+  D I
Sbjct: 620 RDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVI 679

Query: 543 PFRIL 547
            + ++
Sbjct: 680 TYTVV 684



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 211/444 (47%), Gaps = 26/444 (5%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++++ LC  G     +   ++    G   D + +N +V+ LCK+G +E+A  ++ EM   
Sbjct: 372 SILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGR 431

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R S +   Y   I GYC   +L  A ++F  M   GI P+ VT+NILV    + GL  +A
Sbjct: 432 RMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEA 491

Query: 243 VKFLGEVLAD--DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           ++ L  +         AT + I   + M    K     +A A  N +  K ++     Y+
Sbjct: 492 LELLDCIGTQGLKPNSATHNRIIEGLCMAGKVK-----EAEAFLNTLEDKCLEN----YS 542

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +++G+C       A+  F ++ K+G L    +   LL+ LC +G+ D+A      +   
Sbjct: 543 AMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLAL 602

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            V P+QI Y  +I   C  GD+ +A+     ++E+ + P+   + ++I+GY R   L  A
Sbjct: 603 DVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREA 662

Query: 421 FSIRDLMLSFGVSSNVFTFNALI-------------LAETRGG--SIFDAFSLKKEMLLD 465
             I + M   G+  +V T+  ++             L  ++G      DA     EM   
Sbjct: 663 RDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEM 722

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           GI PDV  Y +LI + C   ++  A+ LYDEM+ RG+ PDI+TYT L+   C+RG+M  A
Sbjct: 723 GIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRA 782

Query: 526 EEVFAKIQTLGLAIDHIPFRILKK 549
             +  ++   G+  D     +L +
Sbjct: 783 ITLVNEMSFKGIEPDSRAMSVLHR 806



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 214/479 (44%), Gaps = 61/479 (12%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + AVIR  C   K+  A  +   M+ +G  PD   +  L++  CK G+L +A  +  +M 
Sbjct: 300 YTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMV 359

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                 NC   ++ +   C +    + +  F    ++GI  + V +NI+V ALCK G + 
Sbjct: 360 SNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVE 419

Query: 241 DAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           +AV+ L E+     G+  S DV+  T L+  Y   G    A  ++ +M ++ I+ DIV Y
Sbjct: 420 EAVELLNEM----KGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTY 475

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF------ 353
           N+L+ GF  NG    A      +  +G  P+  T+N ++  LC  GK+ EA  F      
Sbjct: 476 NILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLED 535

Query: 354 -------------------------YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
                                    +  LSK G+   + S   ++  LC+ G+  KA   
Sbjct: 536 KCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALIL 595

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  ML   V P   ++  +I  + R GD+  A  + D+++  G++ +V T+  +I    R
Sbjct: 596 LERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCR 655

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL--------------- 493
              + +A  +  +M   GI PDV TY +++      GH  + L++               
Sbjct: 656 VNCLREARDIFNDMKERGIKPDVITYTVVLD-----GHSKVNLKMARSLQFSKGSEEEKM 710

Query: 494 -----YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
                + EM   GI PD++ YT LI  HC   N+++A  ++ ++   GL  D + +  L
Sbjct: 711 DASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTAL 769



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 202/436 (46%), Gaps = 29/436 (6%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E +D+ K  RD+G     +  D   +  V+  LC  GK+  A+ L  +M  +    DV+ 
Sbjct: 385 EVVDQFKEFRDSG-----IFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVH 439

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +  L+   C  G L  A ++  EM E    P+  TYN  + G+ R     +AL L   + 
Sbjct: 440 YTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIG 499

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
             G++PN  THN ++  LC  G + +A  FL  +    + K   +    + ++D Y K  
Sbjct: 500 TQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTL----EDKCLENY---SAMVDGYCKAN 552

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
              +A  L++ + ++ I     +   L++  C+ G+   A     +ML     P+ I Y 
Sbjct: 553 FTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYG 612

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            L+   C+ G +  A   + +L + G+ PD I+Y  +I G C    + +AR+    M E+
Sbjct: 613 KLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKER 672

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIR----------------DLMLSFGVSSNVFTF 439
            + P+   + V++DG+ +  +L  A S++                  M   G+  +V  +
Sbjct: 673 GIKPDVITYTVVLDGHSKV-NLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCY 731

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
             LI +  +  ++ DA +L  EM+  G+ PD+ TY  L+ + C+ G +  A+ L +EM  
Sbjct: 732 TVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSF 791

Query: 500 RGITPDIITYTELIKG 515
           +GI PD    + L +G
Sbjct: 792 KGIEPDSRAMSVLHRG 807



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 212/481 (44%), Gaps = 63/481 (13%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           ++G VP +++ N+L+N L + G ++ A  + R +  +  +PN  TY  FI   CR    +
Sbjct: 185 RRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFE 244

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALC--KKGLLG-DAVK------------------ 244
           +A+ +F  M   G+ PN VT +  +  LC  K+  LG +A++                  
Sbjct: 245 EAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVI 304

Query: 245 --FLGEVLADDDGKATSDVITSTI---------LMDSYFKNGDKFQALALWNDMFQKNIQ 293
             F  E+   +      D++   I         L+ +Y K G+  QA+AL NDM    I+
Sbjct: 305 RGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIK 364

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
           T+ V  + ++   C  G  S     F +    G   D + YN +++ LCK GK++EA   
Sbjct: 365 TNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVEL 424

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +    ++ D + Y T+I G C+ G +V A+     M E+ + P+   +N+++ G+ R
Sbjct: 425 LNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSR 484

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM----------L 463
            G    A  + D + + G+  N  T N +I      G + +A +    +          +
Sbjct: 485 NGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAM 544

Query: 464 LDGIFPDVFT---YNL------------------LIGASCNLGHIHLALQLYDEMLRRGI 502
           +DG     FT   Y L                  L+ + C  G    AL L + ML   +
Sbjct: 545 VDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDV 604

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            P+ I Y +LI   C  G+MK A+ VF  +   G+  D I + ++   Y R+    +ARD
Sbjct: 605 EPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARD 664

Query: 563 I 563
           I
Sbjct: 665 I 665



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 157/327 (48%), Gaps = 3/327 (0%)

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           ++LV A  + G+  +A+  L +            +++   LM+   ++G    A+A++  
Sbjct: 161 DMLVKAYVRVGMFDEAIDALFQT---KRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRH 217

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           + +  +  +   Y + I   C  G+   A   F +M + G  P+ +T +T +  LC   +
Sbjct: 218 LKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKR 277

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
            D        L       D  +Y  +I+G C    + +A +  + M+ + + P+ +I+  
Sbjct: 278 SDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGA 337

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +I  Y + G+L  A ++ + M+S G+ +N    ++++      G   +     KE    G
Sbjct: 338 LIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSG 397

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           IF D   YN+++ A C LG +  A++L +EM  R ++ D++ YT LI G+C +G + +A+
Sbjct: 398 IFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAK 457

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRR 553
            +F +++  G+  D + + IL   + R
Sbjct: 458 NMFEEMKERGIEPDIVTYNILVGGFSR 484



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 29/264 (10%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC+ G+   AL L  +M+     P+ + +  L+   C+ GD+++A  V   + E  
Sbjct: 579 LLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERG 638

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  TY   I GYCRVN L +A  +F+ M   GI+P+ +T+ +++             
Sbjct: 639 ITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVL------------- 685

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
                     DG +  ++  +  L  S     +K  A   W++M +  I+ D+V Y VLI
Sbjct: 686 ----------DGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLI 735

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C   ++  A   + +M+ RG  PD++TY  LL+  C +G +D A      +S  G+ 
Sbjct: 736 DSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIE 795

Query: 364 PDQISYKTIIQGLCIHGDIVKARE 387
           PD  +         +H  I+KAR+
Sbjct: 796 PDSRAMSV------LHRGILKARK 813



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/346 (21%), Positives = 148/346 (42%), Gaps = 12/346 (3%)

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
           NE + A   F+ +  +G + N  T+  L+  LC+  L       L E++   +     D+
Sbjct: 75  NEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDI 134

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
                ++       +   +  L            I+  ++L+  +   G    A     Q
Sbjct: 135 TALFDVLREGGGEVEGEHSSVL------------ILVLDMLVKAYVRVGMFDEAIDALFQ 182

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
             +RGF+P +++ N L+N L + GK+D A   Y  L + G+ P+  +Y   I+ LC  G+
Sbjct: 183 TKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGN 242

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
             +A +    M E  V P     +  I+G          +     + +     + F + A
Sbjct: 243 FEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTA 302

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I        + +A  +  +M+ +GI PD + Y  LI A C  G++  A+ L+++M+  G
Sbjct: 303 VIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNG 362

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           I  + +  + +++  C  G   E  + F + +  G+ +D + + I+
Sbjct: 363 IKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIV 408


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 221/451 (49%), Gaps = 5/451 (1%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           +LDR + +  +G V+  L      +  +I  LC  G + + + L R+M ++G   +  T 
Sbjct: 446 SLDRARGLL-SGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 504

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
             L+N  CK   +++A  +  +M +    PN  T+N  I GYC V  + KA  L+  M  
Sbjct: 505 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 564

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G++P+  T+  L+  LC    +  A +F+ ++   ++  A  +  + T L+  +F+ G 
Sbjct: 565 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADL---ENSYAVLNNFSLTALLYGFFREGR 621

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +   LW++M  + ++ D+V++ +++       D   +   F +M ++G  PD I Y  
Sbjct: 622 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 681

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           +++ L K+  + +A + +  +   G +P+ +++  +I  LC  G +  A      ML  +
Sbjct: 682 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 741

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           V+P    +N  +D +   GD+  A  +   ML  G  +++ +FN LI    + G I +A 
Sbjct: 742 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAI 800

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L  ++   G  PD  +Y+ +I   C +G I+ A +L++EML +G+ PD++ Y   I+  
Sbjct: 801 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 860

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
              G   +A  ++  +   G+  +   +R L
Sbjct: 861 NVHGESDKALGIYTNMIRSGVQPNWDTYRAL 891



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 219/434 (50%), Gaps = 8/434 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E  YR    ++   C   ++  AL +   MI+ G VP     +++++EL K   +E+A  
Sbjct: 291 EVTYR---TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 347

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  ++ ++   PN   YNA I   C+    D A  LF  MA  G+ PN VT+ IL+HALC
Sbjct: 348 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 407

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G++ DA+  L + + D   K T  V     L++ Y K G   +A  L + M ++ +  
Sbjct: 408 KRGMIEDAL-CLFDKMRDKGIKVT--VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTP 464

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
              +Y+ LI G C NGD+SS      +M +RG   +  T+  L+N  CK  K+DEA+  +
Sbjct: 465 TAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 524

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +  + V P+++++  +I+G C+ G+I KA +    M+E  + P+ + +  +I G    
Sbjct: 525 DKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLT 584

Query: 415 GDLSNAFS-IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             +S A   + DL  S+ V +N F+  AL+    R G   + + L  EM + G+  D+ +
Sbjct: 585 SGVSKANEFVADLENSYAVLNN-FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVS 643

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           + +++ A+        +  L+ EM  +G+ PD I YT +I       NM +A   + ++ 
Sbjct: 644 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 703

Query: 534 TLGLAIDHIPFRIL 547
             G + + +   +L
Sbjct: 704 VDGYSPNTVTHTVL 717



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 218/476 (45%), Gaps = 10/476 (2%)

Query: 96  ENLDRL-KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           ++ DRL K M   G     LE +   +  +I  LC  G I  AL L  KM  KG    V 
Sbjct: 378 DDADRLFKEMAGRG-----LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 432

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
            +N L+N  CK G L++A  ++  M +   +P  A+Y+  I G CR  +L   + L   M
Sbjct: 433 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 492

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
           A  GI  N  T   L++  CK   + +A +   +++   D     + +T  ++++ Y   
Sbjct: 493 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI---DSNVIPNEVTFNVMIEGYCLV 549

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G+  +A  L++ M +  ++ D   Y  LI+G CL   +S A  +   +     + +  + 
Sbjct: 550 GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSL 609

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
             LL    ++G+  E  H +  ++  GV  D +S+  I+       D  K+      M E
Sbjct: 610 TALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 669

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           + V P+   +  +ID   +  ++  A +  D M+  G S N  T   LI    + G +  
Sbjct: 670 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGS 729

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L KEML   + P+ FTYN  +      G +  A  L+  ML +G    I+++  LIK
Sbjct: 730 AELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIK 788

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           G C  G ++EA ++ +KI   G + D I +  +     +M + +KA ++  + L +
Sbjct: 789 GLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 844



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 223/511 (43%), Gaps = 72/511 (14%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC   +   A  L ++M  +G  P+ +T+  L++ LCK G +E A  +  +M + 
Sbjct: 366 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 425

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
                   YN+ I GYC+   LD+A  L S M   G+ P   +++ L+  LC+ G L   
Sbjct: 426 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSC 485

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++   E+   + G A ++  T T L++ + K+    +A  L++ M   N+  + V +NV+
Sbjct: 486 MELHREM--AERGIAWNNY-TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVM 542

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC-------------------- 342
           I G+CL G+I  AF  + QM++ G  PD  TY +L++ LC                    
Sbjct: 543 IEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYA 602

Query: 343 ---------------KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
                          ++G+  E  H +  ++  GV  D +S+  I+       D  K+  
Sbjct: 603 VLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCV 662

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M E+ V P+   +  +ID   +  ++  A +  D M+  G S N  T   LI    
Sbjct: 663 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLC 722

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYN-------------------------------- 475
           + G +  A  L KEML   + P+ FTYN                                
Sbjct: 723 KSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVS 782

Query: 476 --LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
             +LI   C  G I  A+ L  ++   G +PD I+Y+ +I   C  G++ +A E++ ++ 
Sbjct: 783 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 842

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
             GL  D + + I  +      ESDKA  I+
Sbjct: 843 YKGLKPDVVAYNIFIRWCNVHGESDKALGIY 873



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 188/397 (47%), Gaps = 15/397 (3%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM+Q G   D   +   +   C+  +L+ A  ++  M       +   YN  + G C+  
Sbjct: 211 KMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNM 270

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF------LGEVLADDDGK 256
            + +A+ + + M N G+  + VT+  LV+  C+   L  A++       LG V ++ +  
Sbjct: 271 RVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCS 330

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D +    L++  F    K   L +  ++F         AYN LI+  C N     A 
Sbjct: 331 FMIDELRKKELVEEAFSLACKLGDLGMVPNVF---------AYNALIDKLCKNERFDDAD 381

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F +M  RG  P+ +TY  L++ LCK+G +++A   +  +   G+      Y ++I G 
Sbjct: 382 RLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 441

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G + +AR  L  M+++ + P    ++ +I G  R GDLS+   +   M   G++ N 
Sbjct: 442 CKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN 501

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           +TF ALI    +   + +A  L  +M+   + P+  T+N++I   C +G+I  A QLYD+
Sbjct: 502 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 561

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           M+  G+ PD  TY  LI G C    + +A E  A ++
Sbjct: 562 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 598



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 198/441 (44%), Gaps = 5/441 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A IR  C    +  A  L  +M  +G     + +N L+  LCK   +++A  V   M 
Sbjct: 224 YTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMV 283

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            +  + +  TY   + G+CR+ EL+ AL +   M   G  P+    + ++  L KK L+ 
Sbjct: 284 NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVE 343

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A     ++    D     +V     L+D   KN     A  L+ +M  + ++ + V Y 
Sbjct: 344 EAFSLACKL---GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 400

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI+  C  G I  A   F +M  +G    V  YN+L+N  CKQG LD A      + K 
Sbjct: 401 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 460

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P   SY  +I GLC +GD+    E    M E+ +    + +  +I+G+ +   +  A
Sbjct: 461 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 520

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + D M+   V  N  TFN +I      G+I  AF L  +M+  G+ PD +TY  LI  
Sbjct: 521 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 580

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    +  A +   ++       +  + T L+ G    G   E   ++ ++   G+ +D
Sbjct: 581 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 640

Query: 541 HIPFRILKKRYRRMKESDKAR 561
            + F I+   Y  +K+ DK +
Sbjct: 641 LVSFTIIV--YAALKQHDKEK 659



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 195/403 (48%), Gaps = 3/403 (0%)

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           +  G   +  T + ++  L KI     A  +  +M +     +   Y A I  YC    L
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D A  L   M + G++ + V +N+L++ LCK   + +AV+    ++   +   T+D +T 
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMV---NIGVTADEVTY 294

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
             L+  + +  +   AL + +DM +          + +I+       +  AF+  C++  
Sbjct: 295 RTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGD 354

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G +P+V  YN L++ LCK  + D+A   +  ++  G+ P++++Y  +I  LC  G I  
Sbjct: 355 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 414

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A      M +K +    + +N +I+GY + G L  A  +   M+  G++    +++ LI 
Sbjct: 415 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 474

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              R G +     L +EM   GI  + +T+  LI   C    +  A +L+D+M+   + P
Sbjct: 475 GLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 534

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + +T+  +I+G+C  GN+++A +++ ++  +GL  D+  +R L
Sbjct: 535 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 577



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 155/354 (43%), Gaps = 37/354 (10%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   CL G I  A  L  +M++ G  PD  T+  L++ LC    + KA+  + ++    
Sbjct: 542 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 601

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  +  A + G+ R     +  HL+  MA  G++ + V+  I+V+A  K+     + 
Sbjct: 602 AVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 661

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+    +     D I  T ++D+  K  +  QAL  W+ M       + V + VLI
Sbjct: 662 VLFREM---KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLI 718

Query: 304 NGFCLNGDISSA----------------FAYFC------------------QMLKRGFLP 329
           N  C +G + SA                F Y C                    + +G L 
Sbjct: 719 NNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA 778

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
            ++++N L+  LCK GK+ EA      ++++G +PD ISY TII  LC  GDI KA E  
Sbjct: 779 SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELW 838

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
             ML K + P+   +N+ I      G+   A  I   M+  GV  N  T+ AL+
Sbjct: 839 NEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 892



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 136/279 (48%), Gaps = 4/279 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+      L  +M  +G   D+++   +V    K  D EK+  + REM E    P+   Y
Sbjct: 620 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 679

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I    +   + +AL+ +  M  +G  PN VTH +L++ LCK G LG A     E+LA
Sbjct: 680 TCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 739

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
              G    +  T    +D +   GD  +A  L + M Q ++ + IV++N+LI G C  G 
Sbjct: 740 ---GNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLAS-IVSFNILIKGLCKAGK 795

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I  A     ++ + GF PD I+Y+T+++ LCK G +++A   +  +   G+ PD ++Y  
Sbjct: 796 IQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNI 855

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            I+   +HG+  KA     +M+   V P    +  ++ G
Sbjct: 856 FIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 894



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 139/334 (41%), Gaps = 39/334 (11%)

Query: 277 KFQALALWNDMFQKNIQT----DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K +  AL  D+F K +Q+    D   Y   I  +C + ++  A     +M   G     +
Sbjct: 198 KIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAV 257

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            YN L+  LCK  ++ EA     V+   GV  D+++Y+T++ G C   ++  A      M
Sbjct: 258 PYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDM 317

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--------- 443
           +    VP     + +ID   +   +  AFS+   +   G+  NVF +NALI         
Sbjct: 318 IRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERF 377

Query: 444 ------LAETRG--------------------GSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
                   E  G                    G I DA  L  +M   GI   V+ YN L
Sbjct: 378 DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSL 437

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I   C  G +  A  L   M++ G+TP   +Y+ LI G C  G++    E+  ++   G+
Sbjct: 438 INGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGI 497

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           A ++  F  L   + + K+ D+A  +  K +  N
Sbjct: 498 AWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 531



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 67/111 (60%), Gaps = 2/111 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC  GKI  A+ L  K+ + G  PD ++++ +++ELCK+GD+ KA  +  EM    
Sbjct: 786 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 845

Query: 184 PSPNCATYNAFITGYCRVN-ELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             P+   YN FI  +C V+ E DKAL +++ M  +G++PN  T+  L+  +
Sbjct: 846 LKPDVVAYNIFIR-WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 63/138 (45%)

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
           L LS G++ N +T + ++ +  +      A  L  +ML  G+  D + Y   I A C   
Sbjct: 176 LSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESR 235

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           ++  A  L   M   G+    + Y  L+ G C    ++EA EV   +  +G+  D + +R
Sbjct: 236 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 295

Query: 546 ILKKRYRRMKESDKARDI 563
            L   + RM+E + A  I
Sbjct: 296 TLVYGFCRMEELEMALRI 313



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 5/104 (4%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E +D +  + ++G        D   +  +I +LC  G I  A  L  +M+ KG  PDV
Sbjct: 796 IQEAIDLMSKITESG-----FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDV 850

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITG 197
           + +N  +      G+ +KA  +   M      PN  TY A ++G
Sbjct: 851 VAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 894


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 221/451 (49%), Gaps = 5/451 (1%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           +LDR + +  +G V+  L      +  +I  LC  G + + + L R+M ++G   +  T 
Sbjct: 423 SLDRARGLL-SGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 481

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
             L+N  CK   +++A  +  +M +    PN  T+N  I GYC V  + KA  L+  M  
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 541

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G++P+  T+  L+  LC    +  A +F+ ++   ++  A  +  + T L+  +F+ G 
Sbjct: 542 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADL---ENSYAVLNNFSLTALLYGFFREGR 598

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +   LW++M  + ++ D+V++ +++       D   +   F +M ++G  PD I Y  
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 658

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           +++ L K+  + +A + +  +   G +P+ +++  +I  LC  G +  A      ML  +
Sbjct: 659 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           V+P    +N  +D +   GD+  A  +   ML  G  +++ +FN LI    + G I +A 
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAI 777

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L  ++   G  PD  +Y+ +I   C +G I+ A +L++EML +G+ PD++ Y   I+  
Sbjct: 778 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 837

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
              G   +A  ++  +   G+  +   +R L
Sbjct: 838 NVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 219/434 (50%), Gaps = 8/434 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E  YR    ++   C   ++  AL +   MI+ G VP     +++++EL K   +E+A  
Sbjct: 268 EVTYR---TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  ++ ++   PN   YNA I   C+    D A  LF  MA  G+ PN VT+ IL+HALC
Sbjct: 325 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G++ DA+  L + + D   K T  V     L++ Y K G   +A  L + M ++ +  
Sbjct: 385 KRGMIEDAL-CLFDKMRDKGIKVT--VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTP 441

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
              +Y+ LI G C NGD+SS      +M +RG   +  T+  L+N  CK  K+DEA+  +
Sbjct: 442 TAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +  + V P+++++  +I+G C+ G+I KA +    M+E  + P+ + +  +I G    
Sbjct: 502 DKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLT 561

Query: 415 GDLSNAFS-IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             +S A   + DL  S+ V +N F+  AL+    R G   + + L  EM + G+  D+ +
Sbjct: 562 SGVSKANEFVADLENSYAVLNN-FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVS 620

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           + +++ A+        +  L+ EM  +G+ PD I YT +I       NM +A   + ++ 
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 680

Query: 534 TLGLAIDHIPFRIL 547
             G + + +   +L
Sbjct: 681 VDGYSPNTVTHTVL 694



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 218/476 (45%), Gaps = 10/476 (2%)

Query: 96  ENLDRL-KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           ++ DRL K M   G     LE +   +  +I  LC  G I  AL L  KM  KG    V 
Sbjct: 355 DDADRLFKEMAGRG-----LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVY 409

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
            +N L+N  CK G L++A  ++  M +   +P  A+Y+  I G CR  +L   + L   M
Sbjct: 410 PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREM 469

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
           A  GI  N  T   L++  CK   + +A +   +++   D     + +T  ++++ Y   
Sbjct: 470 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI---DSNVIPNEVTFNVMIEGYCLV 526

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G+  +A  L++ M +  ++ D   Y  LI+G CL   +S A  +   +     + +  + 
Sbjct: 527 GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSL 586

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
             LL    ++G+  E  H +  ++  GV  D +S+  I+       D  K+      M E
Sbjct: 587 TALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 646

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           + V P+   +  +ID   +  ++  A +  D M+  G S N  T   LI    + G +  
Sbjct: 647 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGS 706

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L KEML   + P+ FTYN  +      G +  A  L+  ML +G    I+++  LIK
Sbjct: 707 AELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIK 765

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           G C  G ++EA ++ +KI   G + D I +  +     +M + +KA ++  + L +
Sbjct: 766 GLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYK 821



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 223/511 (43%), Gaps = 72/511 (14%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC   +   A  L ++M  +G  P+ +T+  L++ LCK G +E A  +  +M + 
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
                   YN+ I GYC+   LD+A  L S M   G+ P   +++ L+  LC+ G L   
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSC 462

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++   E+   + G A ++  T T L++ + K+    +A  L++ M   N+  + V +NV+
Sbjct: 463 MELHREMA--ERGIAWNNY-TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVM 519

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC-------------------- 342
           I G+CL G+I  AF  + QM++ G  PD  TY +L++ LC                    
Sbjct: 520 IEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYA 579

Query: 343 ---------------KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
                          ++G+  E  H +  ++  GV  D +S+  I+       D  K+  
Sbjct: 580 VLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCV 639

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M E+ V P+   +  +ID   +  ++  A +  D M+  G S N  T   LI    
Sbjct: 640 LFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLC 699

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYN-------------------------------- 475
           + G +  A  L KEML   + P+ FTYN                                
Sbjct: 700 KSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVS 759

Query: 476 --LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
             +LI   C  G I  A+ L  ++   G +PD I+Y+ +I   C  G++ +A E++ ++ 
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
             GL  D + + I  +      ESDKA  I+
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIY 850



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 188/397 (47%), Gaps = 15/397 (3%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM+Q G   D   +   +   C+  +L+ A  ++  M       +   YN  + G C+  
Sbjct: 188 KMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNM 247

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF------LGEVLADDDGK 256
            + +A+ + + M N G+  + VT+  LV+  C+   L  A++       LG V ++ +  
Sbjct: 248 RVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCS 307

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D +    L++  F    K   L +  ++F         AYN LI+  C N     A 
Sbjct: 308 FMIDELRKKELVEEAFSLACKLGDLGMVPNVF---------AYNALIDKLCKNERFDDAD 358

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F +M  RG  P+ +TY  L++ LCK+G +++A   +  +   G+      Y ++I G 
Sbjct: 359 RLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 418

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G + +AR  L  M+++ + P    ++ +I G  R GDLS+   +   M   G++ N 
Sbjct: 419 CKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNN 478

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           +TF ALI    +   + +A  L  +M+   + P+  T+N++I   C +G+I  A QLYD+
Sbjct: 479 YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQ 538

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           M+  G+ PD  TY  LI G C    + +A E  A ++
Sbjct: 539 MVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 198/441 (44%), Gaps = 5/441 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A IR  C    +  A  L  +M  +G     + +N L+  LCK   +++A  V   M 
Sbjct: 201 YTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMV 260

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            +  + +  TY   + G+CR+ EL+ AL +   M   G  P+    + ++  L KK L+ 
Sbjct: 261 NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVE 320

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A     ++    D     +V     L+D   KN     A  L+ +M  + ++ + V Y 
Sbjct: 321 EAFSLACKL---GDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYA 377

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI+  C  G I  A   F +M  +G    V  YN+L+N  CKQG LD A      + K 
Sbjct: 378 ILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P   SY  +I GLC +GD+    E    M E+ +    + +  +I+G+ +   +  A
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + D M+   V  N  TFN +I      G+I  AF L  +M+  G+ PD +TY  LI  
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    +  A +   ++       +  + T L+ G    G   E   ++ ++   G+ +D
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 617

Query: 541 HIPFRILKKRYRRMKESDKAR 561
            + F I+   Y  +K+ DK +
Sbjct: 618 LVSFTIIV--YAALKQHDKEK 636



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 196/403 (48%), Gaps = 3/403 (0%)

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           +  G   +  T + ++  L KI     A  +  +M +     +   Y A I  YC    L
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D A  L   M + G++ + V +N+L++ LCK   + +AV+ +  V+ +     T+D +T 
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVE-VKNVMVNIG--VTADEVTY 271

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
             L+  + +  +   AL + +DM +          + +I+       +  AF+  C++  
Sbjct: 272 RTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGD 331

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G +P+V  YN L++ LCK  + D+A   +  ++  G+ P++++Y  +I  LC  G I  
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A      M +K +    + +N +I+GY + G L  A  +   M+  G++    +++ LI 
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 451

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              R G +     L +EM   GI  + +T+  LI   C    +  A +L+D+M+   + P
Sbjct: 452 GLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + +T+  +I+G+C  GN+++A +++ ++  +GL  D+  +R L
Sbjct: 512 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 155/354 (43%), Gaps = 37/354 (10%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   CL G I  A  L  +M++ G  PD  T+  L++ LC    + KA+  + ++    
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 578

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  +  A + G+ R     +  HL+  MA  G++ + V+  I+V+A  K+     + 
Sbjct: 579 AVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 638

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+    +     D I  T ++D+  K  +  QAL  W+ M       + V + VLI
Sbjct: 639 VLFREM---KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLI 695

Query: 304 NGFCLNGDISSA----------------FAYFC------------------QMLKRGFLP 329
           N  C +G + SA                F Y C                    + +G L 
Sbjct: 696 NNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA 755

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
            ++++N L+  LCK GK+ EA      ++++G +PD ISY TII  LC  GDI KA E  
Sbjct: 756 SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELW 815

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
             ML K + P+   +N+ I      G+   A  I   M+  GV  N  T+ AL+
Sbjct: 816 NEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 869



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 136/279 (48%), Gaps = 4/279 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+      L  +M  +G   D+++   +V    K  D EK+  + REM E    P+   Y
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 656

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I    +   + +AL+ +  M  +G  PN VTH +L++ LCK G LG A     E+LA
Sbjct: 657 TCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 716

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
              G    +  T    +D +   GD  +A  L + M Q ++ + IV++N+LI G C  G 
Sbjct: 717 ---GNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLAS-IVSFNILIKGLCKAGK 772

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I  A     ++ + GF PD I+Y+T+++ LCK G +++A   +  +   G+ PD ++Y  
Sbjct: 773 IQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNI 832

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
            I+   +HG+  KA     +M+   V P    +  ++ G
Sbjct: 833 FIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 139/334 (41%), Gaps = 39/334 (11%)

Query: 277 KFQALALWNDMFQKNIQT----DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K +  AL  D+F K +Q+    D   Y   I  +C + ++  A     +M   G     +
Sbjct: 175 KIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAV 234

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            YN L+  LCK  ++ EA     V+   GV  D+++Y+T++ G C   ++  A      M
Sbjct: 235 PYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDM 294

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--------- 443
           +    VP     + +ID   +   +  AFS+   +   G+  NVF +NALI         
Sbjct: 295 IRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERF 354

Query: 444 ------LAETRG--------------------GSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
                   E  G                    G I DA  L  +M   GI   V+ YN L
Sbjct: 355 DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSL 414

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I   C  G +  A  L   M++ G+TP   +Y+ LI G C  G++    E+  ++   G+
Sbjct: 415 INGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGI 474

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           A ++  F  L   + + K+ D+A  +  K +  N
Sbjct: 475 AWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 67/111 (60%), Gaps = 2/111 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC  GKI  A+ L  K+ + G  PD ++++ +++ELCK+GD+ KA  +  EM    
Sbjct: 763 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822

Query: 184 PSPNCATYNAFITGYCRVN-ELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             P+   YN FI  +C V+ E DKAL +++ M  +G++PN  T+  L+  +
Sbjct: 823 LKPDVVAYNIFIR-WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 63/138 (45%)

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
           L LS G++ N +T + ++ +  +      A  L  +ML  G+  D + Y   I A C   
Sbjct: 153 LSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESR 212

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           ++  A  L   M   G+    + Y  L+ G C    ++EA EV   +  +G+  D + +R
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 272

Query: 546 ILKKRYRRMKESDKARDI 563
            L   + RM+E + A  I
Sbjct: 273 TLVYGFCRMEELEMALRI 290


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 202/427 (47%), Gaps = 9/427 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC+ GK+  A  +R +M   G  P++LT N +V+ LCK    E A  +    S+  
Sbjct: 397 IIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRG 456

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN  TY + I G  +   +D A  LF  M + G   N V +  L+      G   D  
Sbjct: 457 CNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGH 516

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K   E+   +      D+      MD  FK GD  +  A++ D+       D+ +Y++LI
Sbjct: 517 KIFKEM---NRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILI 573

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G    G      + F  M ++GF  D   YN +++  CK GKLD+A      +    V 
Sbjct: 574 HGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVP 633

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P   +Y +II GL     + +A         K +     +++ +IDG+G+ G +  A+ I
Sbjct: 634 PTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLI 693

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDA---FSLKKEMLLDGIFPDVFTYNLLIGA 480
            + M+  G++ NV+T+N+L+ A  +   I +A   F   KEM      P+ +TY++LI  
Sbjct: 694 LEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCS---PNTYTYSILING 750

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C +   + A   + EM ++G+ P+++TYT +I G    GN+ +A  +F + +  G   D
Sbjct: 751 LCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPD 810

Query: 541 HIPFRIL 547
              F  L
Sbjct: 811 AASFNAL 817



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/447 (24%), Positives = 204/447 (45%), Gaps = 12/447 (2%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR--PSPNC 188
            G+   A  L  ++ ++G +P V++ N +   L  +G   K D  +     M+    PN 
Sbjct: 335 AGQFENAYKLLDQLKERGCIPSVVSFNSI---LTCLGKKRKVDEALTLFEAMKKDAEPNS 391

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
           +TYN  I   C   ++++A  +   M + G+ PN +T NI+V  LCK      A +    
Sbjct: 392 STYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFET 451

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
             A   G    + +T   L+D   K G+   A  L+ +M       + V Y  LI  F +
Sbjct: 452 --ASQRG-CNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFM 508

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           +G        F +M +RG  PD+   NT ++C+ K G +++    +  +   G  PD  S
Sbjct: 509 HGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRS 568

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I GL   G   +      +M ++    +   +N ++DG+ + G L  A+ + + M 
Sbjct: 569 YSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMK 628

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
              V   V T+ ++I    +   + +A+ L +E    GI  +V  Y+ LI     +G I 
Sbjct: 629 VKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRID 688

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A  + +EM+++G+TP++ T+  L+        + EA   F  ++ +  + +   + IL 
Sbjct: 689 EAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILI 748

Query: 549 KRYRRMKESDKA----RDIHQKWLLRN 571
               R+++ +KA    +++ ++ L+ N
Sbjct: 749 NGLCRVQKYNKAFVFWQEMQKQGLVPN 775



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/442 (22%), Positives = 200/442 (45%), Gaps = 6/442 (1%)

Query: 129 CLG--GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           C G  G +  A     ++  +G  PD +++  ++  LCK G L +A+ +  +M   R  P
Sbjct: 261 CFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVP 320

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
               YN  I GY    + + A  L   +   G  P+ V+ N ++  L KK  + +A+   
Sbjct: 321 CAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF 380

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            E +  D   A  +  T  I++D     G   +A  + ++M    +  +++  N++++  
Sbjct: 381 -EAMKKD---AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRL 436

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C       A+  F    +RG  P+ +TY +L++ L K+G +D+A   +  +  TG   + 
Sbjct: 437 CKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP 496

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           + Y ++I+   +HG      +    M  +   P+  + N  +D   + GD+    +I + 
Sbjct: 497 VVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFED 556

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           +  +G   +V +++ LI   T+ G   +  S+   M   G   D   YN ++   C  G 
Sbjct: 557 IKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGK 616

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A ++ +EM  + + P + TY  +I G      + EA  +F + ++ G+ ++ I +  
Sbjct: 617 LDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 676

Query: 547 LKKRYRRMKESDKARDIHQKWL 568
           L   + ++   D+A  I ++ +
Sbjct: 677 LIDGFGKVGRIDEAYLILEEMM 698



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/430 (22%), Positives = 192/430 (44%), Gaps = 4/430 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL L R+M + G    V     LV  L + G +E A  ++ E+      P+   YN  I 
Sbjct: 201 ALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCID 260

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            + +   +D A   F  + + G++P+ V++  ++  LCK G L +A +  G++   +  +
Sbjct: 261 CFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQM---ETER 317

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
           A         ++  Y   G    A  L + + ++     +V++N ++        +  A 
Sbjct: 318 AVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEAL 377

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F + +K+   P+  TYN +++ LC  GK++EA      +   G+ P+ ++   ++  L
Sbjct: 378 TLF-EAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRL 436

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C       A E   +  ++   P    +  +IDG G+ G++ +A+ + + ML  G ++N 
Sbjct: 437 CKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP 496

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
             + +LI      G   D   + KEM   G  PD+   N  +      G +     ++++
Sbjct: 497 VVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFED 556

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           +   G  PD+ +Y+ LI G    G  +E   +F  ++  G A+D   +  +   + +  +
Sbjct: 557 IKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGK 616

Query: 557 SDKARDIHQK 566
            DKA ++ ++
Sbjct: 617 LDKAYEVLEE 626



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 3/260 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D R +  +I  L   G+      +   M Q+G   D   +N +V+  CK G L+KA  V+
Sbjct: 565 DVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVL 624

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM   R  P  ATY + I G  +++ LD+A  LF    + GI  N + ++ L+    K 
Sbjct: 625 EEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKV 684

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A   L E++       T +V T   LMD+  K  +  +AL  +  M +     + 
Sbjct: 685 GRIDEAYLILEEMMKKG---LTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNT 741

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y++LING C     + AF ++ +M K+G +P+V+TY T++  L K G + +A   +  
Sbjct: 742 YTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFER 801

Query: 357 LSKTGVAPDQISYKTIIQGL 376
               G  PD  S+  +I+G+
Sbjct: 802 FKANGGTPDAASFNALIEGM 821



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 167/346 (48%), Gaps = 3/346 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++IR+  + G+      + ++M ++G  PD+   N  ++ + K GD+EK   +  ++ 
Sbjct: 499 YTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIK 558

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  +Y+  I G  +  +  +   +F  M   G   +   +N +V   CK G L 
Sbjct: 559 GYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLD 618

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A + L E+      +    V T   ++D   K     +A  L+ +   K I+ +++ Y+
Sbjct: 619 KAYEVLEEMKVK---RVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYS 675

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+GF   G I  A+    +M+K+G  P+V T+N+L++ L K  +++EA   +  + + 
Sbjct: 676 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEM 735

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
             +P+  +Y  +I GLC      KA  F   M ++ +VP    +  +I G  + G++++A
Sbjct: 736 KCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDA 795

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
            S+ +   + G + +  +FNALI   +      +A+ + +E  L G
Sbjct: 796 CSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKG 841



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 91/406 (22%), Positives = 161/406 (39%), Gaps = 78/406 (19%)

Query: 168 DLEKADHVIREMSEMR---PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           DL   + V+ EMS +    P+P CA     ++   R   LD A  + + M     RP   
Sbjct: 127 DLAAMEKVLEEMSVLGYGVPNPACAD---LVSALVRTRRLDDAERVIAAMRRLKFRPAFS 183

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
            + +L+ A+ +                                           +AL L 
Sbjct: 184 AYTVLIGAMAEAR--------------------------------------QPERALELL 205

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
             M +   +  +  +  L+      G +  A A   ++      PD++ YN  ++C  K 
Sbjct: 206 RQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKA 265

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
           G +D A  F+  L   G+ PD +SY ++I  LC  G + +A E    M  +  VP  + +
Sbjct: 266 GNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAY 325

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--LAETR-------------- 448
           N +I GYG  G   NA+ + D +   G   +V +FN+++  L + R              
Sbjct: 326 NTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK 385

Query: 449 ------------------GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
                              G + +A+ ++ EM   G+FP++ T N+++   C       A
Sbjct: 386 DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPA 445

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            ++++   +RG  P+ +TY  LI G   +GN+ +A  +F  +   G
Sbjct: 446 YEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTG 491



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   K   A    ++M ++G VP+V+T+  ++  L K+G++  A  +        
Sbjct: 747 LINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANG 806

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+ A++NA I G    N   +A H+F      G R N      L+ AL K   L  A 
Sbjct: 807 GTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAA 866


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 211/427 (49%), Gaps = 5/427 (1%)

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
            TAL L ++M   G   D  T N L+N   ++G    +  +  ++ +    P   T+N  
Sbjct: 78  STALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTL 137

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           I G C    + +ALH    +   G   ++V++  L++ LCK G +  A++ L  V    D
Sbjct: 138 IKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRV----D 193

Query: 255 GK-ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
           GK    + +   +++D+  K      A  L++ M  K I  D+  YN LI+GF     ++
Sbjct: 194 GKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLN 253

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A   F +M K    P+V T+N L++  CK+GK+++A     ++ K  + PD ++Y +++
Sbjct: 254 YAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLM 313

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            G C    + KA++   SM    V+    I+  +++G+ +   +  A ++ + M    + 
Sbjct: 314 DGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKII 373

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            NV T+++LI    + G IF A  L  EM   G  P++ TY+ ++ A C   H+  A+ L
Sbjct: 374 PNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIAL 433

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
              +  +GI PD+ TYT LIKG C  G +++A+ VF  +   G  +D   + ++ + +  
Sbjct: 434 LTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCD 493

Query: 554 MKESDKA 560
               DKA
Sbjct: 494 KGFFDKA 500



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 222/457 (48%), Gaps = 3/457 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E+D+     +I      G    +  +  K+++KG  P  +T N L+  LC  G + +A 
Sbjct: 92  IESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQAL 151

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           H   ++       +  +Y   I G C+V  +  AL L   +    ++PN V +N+++  +
Sbjct: 152 HFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNM 211

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK  L+ DA     +++A    +   DV T   L+  +        A+ L+N M ++NI 
Sbjct: 212 CKAKLVNDAFDLYSQMVAK---RICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENIN 268

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++  +N+L++GFC  G ++ A      M+K    PDV+TYN+L++  C   K+++A   
Sbjct: 269 PNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDI 328

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  ++  GV  +   Y T++ G C    + +A      M  + ++P    ++ +IDG  +
Sbjct: 329 FDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCK 388

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G +  A  + D M   G   N+ T+++++ A  +   +  A +L   +   GI PD++T
Sbjct: 389 LGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYT 448

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y +LI   C  G +  A  +++++L +G   D+  YT +I+G C +G   +A  + +K++
Sbjct: 449 YTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKME 508

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
             G   +   + ++        E+D A  + ++ ++R
Sbjct: 509 DNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVR 545



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 198/415 (47%), Gaps = 3/415 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I+ LCL G I  AL    K++ +G   D +++  L+N LCK+G +  A  +++ +   
Sbjct: 136 TLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGK 195

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   YN  I   C+   ++ A  L+S M    I P+  T+N L+        L  A
Sbjct: 196 LVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYA 255

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    ++  ++      +V T  IL+D + K G    A  +   M + +I+ D+V YN L
Sbjct: 256 IDLFNKMKKEN---INPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSL 312

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+C    ++ A   F  M   G + +V  Y T++N  CK   +DEA + +  +    +
Sbjct: 313 MDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKI 372

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ ++Y ++I GLC  G I  A + +  M ++   P    ++ I+D   +   +  A +
Sbjct: 373 IPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIA 432

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   +   G+  +++T+  LI    + G + DA ++ +++L+ G   DV+ Y ++I   C
Sbjct: 433 LLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFC 492

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           + G    AL L  +M   G  P+  TY  +I     +     AE++  ++   GL
Sbjct: 493 DKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 166/304 (54%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           ++ S  K      AL+L   M    I++D   +N+LIN F   G  S +F+ F ++LK+G
Sbjct: 67  ILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKG 126

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           + P  IT+NTL+  LC +G + +A HF+  +   G   DQ+SY T+I GLC  G I  A 
Sbjct: 127 YHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAAL 186

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + L  +  K V P   ++N+IID   +   +++AF +   M++  +  +VFT+NALI   
Sbjct: 187 QLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGF 246

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
           +    +  A  L  +M  + I P+V+T+N+L+   C  G ++ A  +   M++  I PD+
Sbjct: 247 SAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDV 306

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +TY  L+ G+C+   + +A+++F  + + G+  +   +  +   + ++K  D+A ++ ++
Sbjct: 307 VTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEE 366

Query: 567 WLLR 570
              R
Sbjct: 367 MRCR 370



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 137/275 (49%), Gaps = 3/275 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C  GK+  A  +   M++    PDV+T+N L++  C I  + KA  +   M+   
Sbjct: 277 LVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGG 336

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N   Y   + G+C++  +D+A++LF  M    I PN VT++ L+  LCK G +  A+
Sbjct: 337 VIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYAL 396

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K + E+   D G+  + V  S+IL D+  KN    +A+AL  ++  + I+ D+  Y +LI
Sbjct: 397 KLVDEM--HDRGQPPNIVTYSSIL-DALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILI 453

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C +G +  A   F  +L +G+  DV  Y  ++   C +G  D+A      +   G  
Sbjct: 454 KGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCI 513

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           P+  +Y+ +I  L    +   A + L  M+ + ++
Sbjct: 514 PNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 65/126 (51%)

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           S   L+L    +   F FN ++ +  +      A SL ++M L+GI  D FT+N+LI   
Sbjct: 47  SFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCF 106

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
             LG   L+  ++ ++L++G  P  IT+  LIKG C +G++ +A     K+   G  +D 
Sbjct: 107 SQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQ 166

Query: 542 IPFRIL 547
           + +  L
Sbjct: 167 VSYGTL 172



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 5/119 (4%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  ++D G     +  D   +  +I+ LC  G++  A  +   ++ KG   DV  +  ++
Sbjct: 434 LTNLKDQG-----IRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMI 488

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
              C  G  +KA  ++ +M +    PN  TY   I      +E D A  L   M   G+
Sbjct: 489 QGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 215/442 (48%), Gaps = 2/442 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK+  A+ +   M + G  PD+   N  ++ L     L+KA   +  M  +   PN  T
Sbjct: 245 AGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVIT 304

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I GYC ++ L+ A+ L + M   G  P+++++  ++  LCK+  + +    + ++L
Sbjct: 305 YNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKML 364

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
            D +     D +T    +    K+G   +AL    +  ++  + D V Y+ +++ FC  G
Sbjct: 365 KDSN--LLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREG 422

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A     +M  +G +PDV+TY +++N LC++ K+D+A      + K G  P+ +SY 
Sbjct: 423 RMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYT 482

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            ++ GLC +G+ ++ARE +    E   +P    ++V++ G+ R G  S A  +   M+  
Sbjct: 483 ALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKK 542

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G        N LI +  +   + +A    ++ L +G   +V  +  +I   C    +  A
Sbjct: 543 GFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAA 602

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L L D+M      PD++TYT +I     +G ++EA ++  K+  +GL    + +R +  +
Sbjct: 603 LSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQ 662

Query: 551 YRRMKESDKARDIHQKWLLRNK 572
           Y RM   +    + +K L R +
Sbjct: 663 YCRMGRVEDLLKLLEKMLSRQE 684



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 192/411 (46%), Gaps = 4/411 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
             I  L +G ++  A+    +M      P+V+T+N L+   C +  LE A  +I EM   
Sbjct: 272 TAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFK 331

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTM-ANNGIRPNRVTHNILVHALCKKGLLGD 241
             SP+  +Y   +   C+   + +   L   M  ++ + P++VT+N  VH L K G   +
Sbjct: 332 GCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDE 391

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A++FL E    ++ +   D +  + ++ S+ + G   +A  + N+MF K    D+V Y  
Sbjct: 392 ALEFLREA---EERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTS 448

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +ING C    +  A     QM K G  P+ ++Y  LLN LCK G   EA     +  +  
Sbjct: 449 VINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDW 508

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             P+ I+Y  ++ G    G   +A + +  M++K   P P   N++I    +   +  A 
Sbjct: 509 WIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAK 568

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
              +  L+ G + NV  F  +I    +   +  A SL  +M L    PDV TY  +I A 
Sbjct: 569 RFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDAL 628

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
              G I  A +L  +MLR G+ P  +TY  +I  +C  G +++  ++  K+
Sbjct: 629 GKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKM 679



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 194/445 (43%), Gaps = 41/445 (9%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           LC   +I     L  KM++   + PD +T+N  V+ L K G  ++A   +RE  E R   
Sbjct: 347 LCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV 406

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           +   Y+A +  +CR   +DKA  + + M + G  P+ VT+  +++ LC++  +  A K L
Sbjct: 407 DKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKML 466

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            ++          + ++ T L++   KNG+  +A  + N   +     + + Y+VL++GF
Sbjct: 467 RQMYKHG---CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGF 523

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
              G  S A     +M+K+GF P  +  N L+  LC++ K+DEA  F       G A + 
Sbjct: 524 RREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNV 583

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           +++ T+I G C   D+  A   L  M   +  P+   +  IID  G+ G +  A  +   
Sbjct: 584 VNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMK 643

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           ML  G+     T+  +I    R G + D   L ++ML          YN +I   C+ G+
Sbjct: 644 MLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT--AYNQVIEKLCSFGN 701

Query: 487 IHLALQLYDEMLR-----------------------------------RGITPDIITYTE 511
           +  A +L  ++LR                                   R + PD+    +
Sbjct: 702 LEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEK 761

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLG 536
           + K     G  +EA+++  +    G
Sbjct: 762 VSKKLMLEGKSEEADKLILRFVERG 786



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/353 (22%), Positives = 168/353 (47%), Gaps = 9/353 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++   C  G++  A  +  +M  KG +PDV+T+  ++N LC+   +++A  ++R+M 
Sbjct: 411 YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMY 470

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  +Y A + G C+     +A  + +    +   PN +T+++L+H   ++G   
Sbjct: 471 KHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSS 530

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A   + E++         ++    +L+ S  +     +A              ++V + 
Sbjct: 531 EACDLVREMIKKGFFPTPVEI---NLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFT 587

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I+GFC   D+ +A +    M      PDV+TY T+++ L K+G+++EA+     + + 
Sbjct: 588 TVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRV 647

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP--HIWNVIIDGYGRCGDLS 418
           G+ P  ++Y+T+I   C  G +    E LL +LEK +  +     +N +I+     G+L 
Sbjct: 648 GLIPTPVTYRTVIHQYCRMGRV----EDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLE 703

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            A+ +   +L      +  T + LI +    G    ++++   M    + PD+
Sbjct: 704 QAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDL 756



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 133/298 (44%), Gaps = 1/298 (0%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +M SY + G    A+ +   M +  I+ D+   N  I+   +   +  A  +  +M    
Sbjct: 238 VMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVE 297

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+VITYN L+   C   +L++A      +   G +PD+ISY T++  LC    I + R
Sbjct: 298 IEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVR 357

Query: 387 EFLLSMLEKS-VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
             +  ML+ S ++P+   +N  +    + G    A              +   ++A++ +
Sbjct: 358 LLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHS 417

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             R G +  A  +  EM   G  PDV TY  +I   C    +  A ++  +M + G  P+
Sbjct: 418 FCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPN 477

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            ++YT L+ G C  GN  EA E+    +      + I + +L   +RR  +S +A D+
Sbjct: 478 TVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDL 535



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/227 (21%), Positives = 98/227 (43%), Gaps = 5/227 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC   K+  A     + +  G   +V+    +++  C+  DLE A  ++ +M    
Sbjct: 554 LIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSN 613

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY   I    +   +++A  L   M   G+ P  VT+  ++H  C+ G + D +
Sbjct: 614 KHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLL 673

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L ++L+  + +   + +   +        G+  QA  L   + +   + D    ++LI
Sbjct: 674 KLLEKMLSRQECRTAYNQVIEKLC-----SFGNLEQAYKLLGKVLRTASKIDANTCHMLI 728

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             +   G    ++   C+M  R  +PD+     +   L  +GK +EA
Sbjct: 729 ESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEA 775



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 62/135 (45%)

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           +  P  +  ++  Y R G L NA  +  +M   G+  ++   N  I     G  +  A  
Sbjct: 229 IRRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVR 288

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
             + M +  I P+V TYN LI   C+L  +  A++L  EM  +G +PD I+Y  ++   C
Sbjct: 289 FLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLC 348

Query: 518 ARGNMKEAEEVFAKI 532
               +KE   +  K+
Sbjct: 349 KEKRIKEVRLLMEKM 363



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 53/107 (49%)

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            F  ++++ +R G + +A  +   M   GI PD+   N  I        +  A++  + M
Sbjct: 234 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 293

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
               I P++ITY  LIKG+C    +++A E+ A++   G + D I +
Sbjct: 294 QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISY 340


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 215/442 (48%), Gaps = 2/442 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK+  A+ +   M + G  PD+   N  ++ L     L+KA   +  M  +   PN  T
Sbjct: 182 AGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVIT 241

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I GYC ++ L+ A+ L + M   G  P+++++  ++  LCK+  + +    + ++L
Sbjct: 242 YNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKML 301

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
            D +     D +T    +    K+G   +AL    +  ++  + D V Y+ +++ FC  G
Sbjct: 302 KDSN--LLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREG 359

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A     +M  +G +PDV+TY +++N LC++ K+D+A      + K G  P+ +SY 
Sbjct: 360 RMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYT 419

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            ++ GLC +G+ ++ARE +    E   +P    ++V++ G+ R G  S A  +   M+  
Sbjct: 420 ALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKK 479

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G        N LI +  +   + +A    ++ L +G   +V  +  +I   C    +  A
Sbjct: 480 GFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAA 539

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L L D+M      PD++TYT +I     +G ++EA ++  K+  +GL    + +R +  +
Sbjct: 540 LSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQ 599

Query: 551 YRRMKESDKARDIHQKWLLRNK 572
           Y RM   +    + +K L R +
Sbjct: 600 YCRMGRVEDLLKLLEKMLSRQE 621



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 192/411 (46%), Gaps = 4/411 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
             I  L +G ++  A+    +M      P+V+T+N L+   C +  LE A  +I EM   
Sbjct: 209 TAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFK 268

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTM-ANNGIRPNRVTHNILVHALCKKGLLGD 241
             SP+  +Y   +   C+   + +   L   M  ++ + P++VT+N  VH L K G   +
Sbjct: 269 GCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDE 328

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A++FL E    ++ +   D +  + ++ S+ + G   +A  + N+MF K    D+V Y  
Sbjct: 329 ALEFLREA---EERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTS 385

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +ING C    +  A     QM K G  P+ ++Y  LLN LCK G   EA     +  +  
Sbjct: 386 VINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDW 445

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             P+ I+Y  ++ G    G   +A + +  M++K   P P   N++I    +   +  A 
Sbjct: 446 WIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAK 505

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
              +  L+ G + NV  F  +I    +   +  A SL  +M L    PDV TY  +I A 
Sbjct: 506 RFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDAL 565

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
              G I  A +L  +MLR G+ P  +TY  +I  +C  G +++  ++  K+
Sbjct: 566 GKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKM 616



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 194/445 (43%), Gaps = 41/445 (9%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           LC   +I     L  KM++   + PD +T+N  V+ L K G  ++A   +RE  E R   
Sbjct: 284 LCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV 343

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           +   Y+A +  +CR   +DKA  + + M + G  P+ VT+  +++ LC++  +  A K L
Sbjct: 344 DKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKML 403

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            ++          + ++ T L++   KNG+  +A  + N   +     + + Y+VL++GF
Sbjct: 404 RQMYKHG---CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGF 460

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
              G  S A     +M+K+GF P  +  N L+  LC++ K+DEA  F       G A + 
Sbjct: 461 RREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNV 520

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           +++ T+I G C   D+  A   L  M   +  P+   +  IID  G+ G +  A  +   
Sbjct: 521 VNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMK 580

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           ML  G+     T+  +I    R G + D   L ++ML          YN +I   C+ G+
Sbjct: 581 MLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT--AYNQVIEKLCSFGN 638

Query: 487 IHLALQLYDEMLR-----------------------------------RGITPDIITYTE 511
           +  A +L  ++LR                                   R + PD+    +
Sbjct: 639 LEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEK 698

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLG 536
           + K     G  +EA+++  +    G
Sbjct: 699 VSKKLMLEGKSEEADKLILRFVERG 723



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/353 (22%), Positives = 168/353 (47%), Gaps = 9/353 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++   C  G++  A  +  +M  KG +PDV+T+  ++N LC+   +++A  ++R+M 
Sbjct: 348 YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMY 407

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  +Y A + G C+     +A  + +    +   PN +T+++L+H   ++G   
Sbjct: 408 KHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSS 467

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A   + E++         ++    +L+ S  +     +A              ++V + 
Sbjct: 468 EACDLVREMIKKGFFPTPVEI---NLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFT 524

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I+GFC   D+ +A +    M      PDV+TY T+++ L K+G+++EA+     + + 
Sbjct: 525 TVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRV 584

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP--HIWNVIIDGYGRCGDLS 418
           G+ P  ++Y+T+I   C  G +    E LL +LEK +  +     +N +I+     G+L 
Sbjct: 585 GLIPTPVTYRTVIHQYCRMGRV----EDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLE 640

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            A+ +   +L      +  T + LI +    G    ++++   M    + PD+
Sbjct: 641 QAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDL 693



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 163/394 (41%), Gaps = 4/394 (1%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D + +  ++  L K    + A  V+R M++ R       +   +  Y R  +L  A+ + 
Sbjct: 133 DPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVL 192

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
           + M   GI P+    N  +H L     L  AV+FL  +   +      +VIT   L+  Y
Sbjct: 193 TMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVE---IEPNVITYNCLIKGY 249

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK-RGFLPD 330
                   A+ L  +M  K    D ++Y  ++   C    I        +MLK    LPD
Sbjct: 250 CDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPD 309

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            +TYNT ++ L K G  DEA  F     +     D++ Y  I+   C  G + KA+E + 
Sbjct: 310 QVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVN 369

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M  K  +P+   +  +I+G  +   +  A  +   M   G   N  ++ AL+    + G
Sbjct: 370 EMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNG 429

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           +  +A  +      D   P+  TY++L+      G    A  L  EM+++G  P  +   
Sbjct: 430 NSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEIN 489

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            LI+  C    + EA+    +    G A++ + F
Sbjct: 490 LLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNF 523



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 133/298 (44%), Gaps = 1/298 (0%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +M SY + G    A+ +   M +  I+ D+   N  I+   +   +  A  +  +M    
Sbjct: 175 VMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVE 234

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+VITYN L+   C   +L++A      +   G +PD+ISY T++  LC    I + R
Sbjct: 235 IEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVR 294

Query: 387 EFLLSMLEKS-VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
             +  ML+ S ++P+   +N  +    + G    A              +   ++A++ +
Sbjct: 295 LLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHS 354

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             R G +  A  +  EM   G  PDV TY  +I   C    +  A ++  +M + G  P+
Sbjct: 355 FCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPN 414

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            ++YT L+ G C  GN  EA E+    +      + I + +L   +RR  +S +A D+
Sbjct: 415 TVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDL 472



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/227 (22%), Positives = 100/227 (44%), Gaps = 5/227 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC   K+  A     + +  G   +V+    +++  C+  DLE A  ++ +M    
Sbjct: 491 LIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSN 550

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY   I    +   +++A  L   M   G+ P  VT+  ++H  C+ G + D +
Sbjct: 551 KHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLL 610

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L ++L+  + +   + +   +   S+   G+  QA  L   + +   + D    ++LI
Sbjct: 611 KLLEKMLSRQECRTAYNQVIEKLC--SF---GNLEQAYKLLGKVLRTASKIDANTCHMLI 665

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             +   G    ++   C+M  R  +PD+     +   L  +GK +EA
Sbjct: 666 ESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEA 712


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 193/387 (49%), Gaps = 8/387 (2%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+V+T++  ++  CK G+L+ A      M     SPN  T+   I GYC+  +L+ A+ L
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           +  M    +  N VT+  L+   CKKG +  A +    ++ D   +   + +  T ++D 
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED---RVEPNSLVYTTIIDG 277

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           +F+ GD   A+     M  + ++ DI AY V+I+G C NG +  A      M K   +PD
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           ++ + T++N   K G++  A + Y  L + G  PD ++  T+I G+  +G + +A  +  
Sbjct: 338 MVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC 397

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
             +EK+      ++ V+ID   + GD      +   +   G+  + F + + I    + G
Sbjct: 398 --IEKA---NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQG 452

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           ++ DAF LK  M+ +G+  D+  Y  LI    + G +  A Q++DEML  GI+PD   + 
Sbjct: 453 NLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFD 512

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGL 537
            LI+ +   GNM  A ++   +Q  GL
Sbjct: 513 LLIRAYEKEGNMAAASDLLLDMQRRGL 539



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 221/479 (46%), Gaps = 47/479 (9%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM--- 179
           +V+  +C  G++  A  +   M + G  PDV+++N L++  C+ GD+  A  V+  +   
Sbjct: 61  SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120

Query: 180 -------------------SEMRP---------------SPNCATYNAFITGYCRVNELD 205
                              S+M+                SPN  TY+ +I  +C+  EL 
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
            AL  F +M  + + PN VT   L+   CK G L  AV    E+      + + +V+T T
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM---RRVRMSLNVVTYT 237

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            L+D + K G+  +A  +++ M +  ++ + + Y  +I+GF   GD  +A  +  +ML +
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G   D+  Y  +++ LC  GKL EA+     + K+ + PD + + T++      G +  A
Sbjct: 298 GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAA 357

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS-SNVFTFNALIL 444
                 ++E+   P+    + +IDG  + G L  A      ++ F +  +N   +  LI 
Sbjct: 358 VNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA------IVYFCIEKANDVMYTVLID 411

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A  + G   +   L  ++   G+ PD F Y   I   C  G++  A +L   M++ G+  
Sbjct: 412 ALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLL 471

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           D++ YT LI G  ++G M EA +VF ++   G++ D   F +L + Y +      A D+
Sbjct: 472 DLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDL 530



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 193/382 (50%), Gaps = 8/382 (2%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I   C  G++  AL     M +    P+V+T   L++  CK GDLE A  + +EM  +R 
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           S N  TY A I G+C+  E+ +A  ++S M  + + PN + +  ++    ++G   +A+K
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
           FL ++L   +     D+    +++     NG   +A  +  DM + ++  D+V +  ++N
Sbjct: 290 FLAKML---NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
            +  +G + +A   + ++++RGF PDV+  +T+++ + K G+L EA  ++ +        
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCI-----EKA 401

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           + + Y  +I  LC  GD ++       + E  +VP+  ++   I G  + G+L +AF ++
Sbjct: 402 NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLK 461

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
             M+  G+  ++  +  LI      G + +A  +  EML  GI PD   ++LLI A    
Sbjct: 462 TRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKE 521

Query: 485 GHIHLALQLYDEMLRRGITPDI 506
           G++  A  L  +M RRG+   +
Sbjct: 522 GNMAAASDLLLDMQRRGLVTAV 543



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 179/348 (51%), Gaps = 8/348 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G +  A+ L ++M +     +V+T+  L++  CK G++++A+ +   M E R
Sbjct: 204 LIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDR 263

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN   Y   I G+ +  + D A+   + M N G+R +   + +++  LC  G L +A 
Sbjct: 264 VEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEAT 323

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + + ++   D      D++  T +M++YFK+G    A+ +++ + ++  + D+VA + +I
Sbjct: 324 EIVEDMEKSD---LVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G   NG +  A  YFC  +++    + + Y  L++ LCK+G   E    +  +S+ G+ 
Sbjct: 381 DGIAKNGQLHEAIVYFC--IEKA---NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLV 435

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD+  Y + I GLC  G++V A +    M+++ ++ +   +  +I G    G +  A  +
Sbjct: 436 PDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQV 495

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            D ML+ G+S +   F+ LI A  + G++  A  L  +M   G+   V
Sbjct: 496 FDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 188/434 (43%), Gaps = 72/434 (16%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           ++ +G  P   + N +V+ +CK+G ++ A+ ++  M      P+  +YN+ I G+CR  +
Sbjct: 47  LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106

Query: 204 LDKA-LHLFSTMANNGI--RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
           +  A L L S  A++G   +P+ V+ N L +   K  +L +   ++G +L          
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML---------- 156

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
                                        K    ++V Y+  I+ FC +G++  A   F 
Sbjct: 157 -----------------------------KCCSPNVVTYSTWIDTFCKSGELQLALKSFH 187

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            M +    P+V+T+  L++  CK G L+ A   Y  + +  ++ + ++Y  +I G C  G
Sbjct: 188 SMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKG 247

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
           ++ +A E    M+E  V P   ++  IIDG+ + GD  NA      ML+ G+  ++  + 
Sbjct: 248 EMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            +I      G + +A  + ++M    + PD+  +  ++ A    G +  A+ +Y +++ R
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER 367

Query: 501 GITPDIIT------------------------------YTELIKGHCARGNMKEAEEVFA 530
           G  PD++                               YT LI   C  G+  E E +F+
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFS 427

Query: 531 KIQTLGLAIDHIPF 544
           KI   GL  D   +
Sbjct: 428 KISEAGLVPDKFMY 441



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 164/367 (44%), Gaps = 42/367 (11%)

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           +L   + + + G  P+R + N +V  +CK          LG+V      K   D++ S  
Sbjct: 40  SLKFLAYLVSRGYTPHRSSFNSVVSFVCK----------LGQV------KFAEDIVHS-- 81

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM-LKR 325
                               M +   + D+++YN LI+G C NGDI SA      +    
Sbjct: 82  --------------------MPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121

Query: 326 GFL--PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           GF+  PD++++N+L N   K   LDE   + GV+ K   +P+ ++Y T I   C  G++ 
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQ 180

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A +   SM   ++ P    +  +IDGY + GDL  A S+   M    +S NV T+ ALI
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               + G +  A  +   M+ D + P+   Y  +I      G    A++   +ML +G+ 
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            DI  Y  +I G C  G +KEA E+   ++   L  D + F  +   Y +      A ++
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360

Query: 564 HQKWLLR 570
           + K + R
Sbjct: 361 YHKLIER 367



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 117/285 (41%), Gaps = 43/285 (15%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   +  +I  LC  GK+  A  +   M +   VPD++    ++N   K G ++ A 
Sbjct: 299 MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAV 358

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           ++  ++ E    P+    +  I G  +  +L +A+  F        + N V + +L+ AL
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE-----KANDVMYTVLIDAL 413

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+                                      GD  +   L++ + +  + 
Sbjct: 414 CKE--------------------------------------GDFIEVERLFSKISEAGLV 435

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D   Y   I G C  G++  AF    +M++ G L D++ Y TL+  L  +G + EA   
Sbjct: 436 PDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQV 495

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           +  +  +G++PD   +  +I+     G++  A + LL M  + +V
Sbjct: 496 FDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 199/424 (46%), Gaps = 8/424 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC   ++G A  +  +M +KG  PD +T+  +V+ LCK+  L++A  V+  M    
Sbjct: 165 LVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP--- 221

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P  A+YNA +   CR   + +   + S M   G++PN +T+  +V A CK G L  A 
Sbjct: 222 --PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMAC 279

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L  ++       T +V+T T L+   F +G    AL +W  M  +      V+YN+LI
Sbjct: 280 AILARMVITG---CTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILI 336

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C  GD+  A +    M + G  P+V TY+TL++   K G L  A   +  +S++G  
Sbjct: 337 RGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCK 396

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ + Y  ++   C      +A+  +  ML ++  P    +N +I     C  +  A  +
Sbjct: 397 PNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGV 456

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G   N  T+N LI    R G+  DA  +  EM   GI   + TYN ++   C 
Sbjct: 457 FHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQ 516

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
                 A+    +M+ +GI P+  T++ +I  +C  G ++ A  +   +  +    + + 
Sbjct: 517 TRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILV 576

Query: 544 FRIL 547
           + IL
Sbjct: 577 YTIL 580



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 198/432 (45%), Gaps = 43/432 (9%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C    +G  + +   M + G  P+V T+N LV  LC+   +  A  ++ EM+     P+ 
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TY   ++  C+++ LD+A  + + M      P   ++N +V ALC++            
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCRE------------ 237

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
                                  F+  + F  ++   DM  + +Q +++ Y  +++ FC 
Sbjct: 238 -----------------------FRMQEVFSVVS---DMVGRGLQPNVITYTTIVDAFCK 271

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G++  A A   +M+  G  P+V+T+  L+  L   G++ +A   +  +   G AP  +S
Sbjct: 272 AGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVS 331

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  +I+GLC  GD+  A   L SM +    P    ++ +IDG+ + GDL  A SI + M 
Sbjct: 332 YNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMS 391

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G   NV  +  ++    +      A SL  +MLL+   P+  T+N LI + C+   + 
Sbjct: 392 RSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVG 451

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            AL ++ EM R G  P+  TY ELI G    GN  +A  +  ++Q+ G+ +  + +  + 
Sbjct: 452 RALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVV 511

Query: 549 KRYRRMKESDKA 560
               + + S +A
Sbjct: 512 SGLCQTRMSREA 523



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 189/418 (45%), Gaps = 6/418 (1%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           LDRL    +       +   Y    A++  LC   ++     +   M+ +G  P+V+T+ 
Sbjct: 207 LDRLDEATEVLAAMPPVAASYN---AIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYT 263

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            +V+  CK G+L  A  ++  M     +PN  T+ A + G      +  AL ++  M   
Sbjct: 264 TIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAE 323

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G  P+ V++NIL+  LC  G L  A   L  +   +      +V T + L+D + K GD 
Sbjct: 324 GWAPSTVSYNILIRGLCSVGDLKGASSILNSM---EQHGCFPNVRTYSTLIDGFSKAGDL 380

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             A+++WNDM +   + ++V Y  +++ FC     + A +   +ML     P+ +T+NTL
Sbjct: 381 GGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTL 440

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +  LC   ++  A   +  + + G  P+  +Y  +I GL   G+   A   +  M    +
Sbjct: 441 IRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGI 500

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
                 +N ++ G  +      A      M+  G+  N FTF+A+I A  + G +  A  
Sbjct: 501 ELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAW 560

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           +   M +     ++  Y +L+   CN   +  A+    +ML  GI P+ +T+  L++G
Sbjct: 561 MLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRG 618



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 173/376 (46%), Gaps = 4/376 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ +   +  ++   C  G++  A  +  +M+  G  P+V+T   LV  L   G +  A 
Sbjct: 255 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 314

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + R M     +P+  +YN  I G C V +L  A  + ++M  +G  PN  T++ L+   
Sbjct: 315 DMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGF 374

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K G LG A+    ++          +V+  T ++D + K     QA +L + M  +N  
Sbjct: 375 SKAGDLGGAISIWNDM---SRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCP 431

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            + V +N LI   C    +  A   F +M + G +P+  TYN L++ L ++G   +A H 
Sbjct: 432 PNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHM 491

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+    ++Y T++ GLC      +A  F+  M+ + + P    ++ II  Y +
Sbjct: 492 VTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCK 551

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G++  A  +   M       N+  +  L+        + DA +   +ML +GI+P+  T
Sbjct: 552 EGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVT 611

Query: 474 YNLLI-GASCNLGHIH 488
           +N+L+ G   NLG I 
Sbjct: 612 WNVLVRGVFRNLGCIE 627


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 209/451 (46%), Gaps = 38/451 (8%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A  +  +M+ +    D  T   +   LCK G +E+  H+I +       PN   Y
Sbjct: 181 GKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFY 240

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYC+  ++++A  LF  +   G  P   T+  +++A CKKG      K L E+  
Sbjct: 241 NTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEM-- 298

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            + G A S  I + I+ D+ FK+G + +A      M +   + D+  YN LING C  G 
Sbjct: 299 KERGLAVSLQIFNGII-DARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGK 357

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF---------------YGV 356
           +  A       ++RG  P+  +Y  L++   K G+   AS                 YG 
Sbjct: 358 VREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGA 417

Query: 357 LS--------------------KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L                     + G+ PD   Y  ++ GLC  G    A++ L+ ML+++
Sbjct: 418 LVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQN 477

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           V P+  +   ++DG+ R G+L  A  +  L +  G+ ++V   NA+I    + G + DA 
Sbjct: 478 VTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDAL 537

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
              K M      PD FTY+ +I        +  AL+++  ML++   P+++T+T LI G 
Sbjct: 538 LCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGF 597

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           C  G++  AE+VF ++++ G   + + + IL
Sbjct: 598 CRNGDLNRAEKVFEEMRSFGFEPNVVTYTIL 628



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 207/446 (46%), Gaps = 23/446 (5%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E  D ++ M ++G      E D   +  +I   C  GK+  A  L    I++G  P+  +
Sbjct: 325 EAADAVRWMIESG-----CEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFS 379

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +  L++   K G+  +A  ++ EMSE   + +   Y A + G     E+D AL +   M 
Sbjct: 380 YTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMM 439

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
             GI P+   +N+L+  LCKKG    A + L E+L   D   T D   +  L+D + ++G
Sbjct: 440 ERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEML---DQNVTPDAFVNATLVDGFIRHG 496

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
           +  +A  L+    ++ I T +V  N +I G+C  G ++ A   F +M      PD  TY+
Sbjct: 497 NLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYS 556

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           T+++   KQ  L  A   +G++ K    P+ +++ ++I G C +GD+ +A +    M   
Sbjct: 557 TIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSF 616

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
              P    + ++I  + + G L+ A    + ML      N  TFN L+   T    I  A
Sbjct: 617 GFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGI--A 674

Query: 456 FSLKKE-------------MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
            S K+              M+ DG    +  YN ++   C    +  ALQL+D+M+ +G 
Sbjct: 675 ISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGF 734

Query: 503 TPDIITYTELIKGHCARGNMKEAEEV 528
            PD +++  L+ G C  G +++   V
Sbjct: 735 PPDPVSFIALLHGLCLEGRLQDWNNV 760



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 202/437 (46%), Gaps = 38/437 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V + LC  GK+     L  K   KG VP+++ +N L++  CK GD+E+A+ + +E+    
Sbjct: 208 VTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKG 267

Query: 184 PSPNCATYNAFITGYCRVNELDK---------------ALHLFST--------------- 213
             P   TY A I  +C+  + +                +L +F+                
Sbjct: 268 FLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAA 327

Query: 214 -----MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
                M  +G  P+  T+N L++  C KG + +A + L   +         +  + T L+
Sbjct: 328 DAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRG---LFPNKFSYTPLI 384

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
            ++ KNG+  +A  L  +M ++    D++AY  L++G  + G++  A     +M++RG L
Sbjct: 385 HAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGIL 444

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           PD   YN L++ LCK+G+   A      +    V PD     T++ G   HG++ +A++ 
Sbjct: 445 PDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKL 504

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
               +E+ +       N +I GY + G +++A      M +   S + FT++ +I    +
Sbjct: 505 FQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVK 564

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
              +  A  +   ML     P+V T+  LI   C  G ++ A ++++EM   G  P+++T
Sbjct: 565 QNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVT 624

Query: 509 YTELIKGHCARGNMKEA 525
           YT LI   C  G + +A
Sbjct: 625 YTILIGYFCKEGKLTKA 641



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 183/428 (42%), Gaps = 38/428 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE- 181
            +I   C  G I  A  L +++  KG +P V T+  ++N  CK G  E  D ++ EM E 
Sbjct: 242 TLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKER 301

Query: 182 -------------------------------MRPS---PNCATYNAFITGYCRVNELDKA 207
                                          M  S   P+ ATYN  I G C   ++ +A
Sbjct: 302 GLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREA 361

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L       G+ PN+ ++  L+HA  K G    A + L E+    +   T D+I    L
Sbjct: 362 EELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEM---SERGHTLDLIAYGAL 418

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +      G+   AL + + M ++ I  D   YNVL++G C  G   +A     +ML +  
Sbjct: 419 VHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNV 478

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PD     TL++   + G LDEA   + +  + G+    +    +I+G C +G +  A  
Sbjct: 479 TPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALL 538

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M      P+   ++ IIDGY +  DL  A  +  LML      NV TF +LI    
Sbjct: 539 CFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFC 598

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           R G +  A  + +EM   G  P+V TY +LIG  C  G +  A   +++ML     P+  
Sbjct: 599 RNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDA 658

Query: 508 TYTELIKG 515
           T+  L+ G
Sbjct: 659 TFNYLVNG 666



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 176/407 (43%), Gaps = 39/407 (9%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN-N 217
           L+  L +    ++ ++++  M      P C   +  I+ Y     + +AL L++T+ + +
Sbjct: 102 LLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVH 161

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
              P+    N L++ L   G +  A K   E++   D     D  T  I+     K G  
Sbjct: 162 NCVPDVFACNSLLNLLVHHGKVEIARKVYDEMV---DRNGDVDNYTVCIVTKGLCKEGKV 218

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +   L    + K    +IV YN LI+G+C NGDI  A   F ++  +GFLP V TY  +
Sbjct: 219 EEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAM 278

Query: 338 LNCLCKQGKLD-----------------------------------EASHFYGVLSKTGV 362
           +N  CK+GK +                                   EA+     + ++G 
Sbjct: 279 INAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGC 338

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  +Y T+I G C  G + +A E L   + + + P    +  +I  + + G+   A  
Sbjct: 339 EPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASE 398

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M   G + ++  + AL+      G +  A +++ +M+  GI PD   YN+L+   C
Sbjct: 399 LLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLC 458

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
             G    A QL  EML + +TPD      L+ G    GN+ EA+++F
Sbjct: 459 KKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLF 505


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 201/427 (47%), Gaps = 13/427 (3%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +L+++++ LK M      RC L      + ++I      G    AL + R M Q G  PD
Sbjct: 69  LLEKSVEALKRMEGH---RCALTAS--AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPD 123

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
             T N L+N   K   ++    +  EM     SPN  TY+  I   C+   ++KAL +F 
Sbjct: 124 TYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFL 183

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M + G RPN  T+  ++  L K G + D   FL E +  +   AT  V  S  L+    
Sbjct: 184 DMKSRGCRPNIFTYTSMIDGLGKSGHV-DKAFFLFEEMTSEGLVATRVVYNS--LIHGLG 240

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           ++G    A  L+ +M  K +Q D V +  L+ G  + G  S A   F +    G   DV 
Sbjct: 241 RSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVN 300

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            YN L++ LCK  +LDEA   +G L + G+ PD  ++  ++ GLC  G I  A   L  M
Sbjct: 301 LYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDM 360

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
                 P+  ++N +IDG  + G +  A  +   M S G   +V T+N LI    +GG I
Sbjct: 361 KRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRI 420

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG----ITPDIIT 508
            DA  L +E+   G F +  TYN ++   C  G +  A +L++ M +      I PD +T
Sbjct: 421 EDALRLFEEISAKG-FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVT 479

Query: 509 YTELIKG 515
           YT L+ G
Sbjct: 480 YTTLLNG 486



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 190/372 (51%), Gaps = 3/372 (0%)

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           G LEK+   ++ M   R +   + YN+ I  + +     KAL ++  M  +G+RP+  T 
Sbjct: 68  GLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTF 127

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           N+L++A  KK    D+V  L E + + +   + +VIT +IL+D+  K G   +AL ++ D
Sbjct: 128 NVLMNAF-KKAKRVDSVWKLFEEMQNQN--CSPNVITYSILIDAVCKCGGVEKALKVFLD 184

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M  +  + +I  Y  +I+G   +G +  AF  F +M   G +   + YN+L++ L + G+
Sbjct: 185 MKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGR 244

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
            D A+  +  +   G+ PD +++ +++ GL + G   +AR       +     + +++NV
Sbjct: 245 ADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNV 304

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +ID   +   L  A+ I   +   G+  +V+TFNAL+    + G I DAF L  +M   G
Sbjct: 305 LIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAG 364

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             PDV  YN LI      G +  A QL  EM   G  PD++TY  LI   C  G +++A 
Sbjct: 365 CTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDAL 424

Query: 527 EVFAKIQTLGLA 538
            +F +I   G A
Sbjct: 425 RLFEEISAKGFA 436



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 191/389 (49%), Gaps = 8/389 (2%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
            +N L++   K G  +KA  V R M +    P+  T+N  +  + +   +D    LF  M
Sbjct: 91  AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTILMDSYFK 273
            N    PN +T++IL+ A+CK G +  A+K    V  D   +    ++ T T ++D   K
Sbjct: 151 QNQNCSPNVITYSILIDAVCKCGGVEKALK----VFLDMKSRGCRPNIFTYTSMIDGLGK 206

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           +G   +A  L+ +M  + +    V YN LI+G   +G   +A   F +ML +G  PD +T
Sbjct: 207 SGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVT 266

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           + +L+  L   G+  EA   +      G A D   Y  +I  LC    + +A E    + 
Sbjct: 267 FTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELE 326

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           E  +VP+ + +N ++DG  + G + +AF +   M   G + +V  +N LI    + G + 
Sbjct: 327 EDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVE 386

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L  EM   G  PDV TYN LI  SC  G I  AL+L++E+  +G   + +TY  ++
Sbjct: 387 EAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA-NTVTYNTIL 445

Query: 514 KGHCARGNMKEAEEVF--AKIQTLGLAID 540
            G C  G + EA ++F   K +T+   ID
Sbjct: 446 NGLCMAGRVDEAYKLFNGMKQETVDGVID 474



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 177/362 (48%), Gaps = 9/362 (2%)

Query: 137 ALW-LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           ++W L  +M  +   P+V+T++ L++ +CK G +EKA  V  +M      PN  TY + I
Sbjct: 142 SVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMI 201

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G  +   +DKA  LF  M + G+   RV +N L+H L + G    A K   E+L+    
Sbjct: 202 DGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKG-- 259

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               D +T T L+      G   +A  ++ +        D+  YNVLI+  C +  +  A
Sbjct: 260 -LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEA 318

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
           +  F ++ + G +PDV T+N L++ LCK G++ +A    G + + G  PD   Y T+I G
Sbjct: 319 WEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDG 378

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           L   G + +A + LL M      P+   +N +ID   + G + +A  + + + + G + N
Sbjct: 379 LRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA-N 437

Query: 436 VFTFNALILAETRGGSIFDAFSL---KKEMLLDGIF-PDVFTYNLLIGASCNLGHIHLAL 491
             T+N ++      G + +A+ L    K+  +DG+  PD  TY  L+  +   G   LA 
Sbjct: 438 TVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELAN 497

Query: 492 QL 493
            L
Sbjct: 498 SL 499



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 148/316 (46%), Gaps = 35/316 (11%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+D++ K G   +ALA++  M Q  ++ D   +NVL+N F     + S +  F +M  + 
Sbjct: 95  LIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQN 154

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+VITY+ L++ +CK G +++A   +  +   G  P+  +Y ++I GL   G + KA 
Sbjct: 155 CSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAF 214

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
                M  + +V    ++N +I G GR G    A  +   MLS G+  +  TF +L+   
Sbjct: 215 FLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGL 274

Query: 447 TRGG------SIF-----------------------------DAFSLKKEMLLDGIFPDV 471
              G       IF                             +A+ +  E+  DG+ PDV
Sbjct: 275 GVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDV 334

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
           +T+N L+   C  G IH A  L  +M R G TPD+  Y  LI G    G ++EA ++  +
Sbjct: 335 YTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLE 394

Query: 532 IQTLGLAIDHIPFRIL 547
           +Q+LG   D + +  L
Sbjct: 395 MQSLGYEPDVVTYNTL 410



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 113/266 (42%), Gaps = 35/266 (13%)

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
           AYN LI+ F   G    A A +  M + G  PD  T+N L+N   K  ++D     +  +
Sbjct: 91  AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
                +P+ I+Y  +I  +C                                   +CG +
Sbjct: 151 QNQNCSPNVITYSILIDAVC-----------------------------------KCGGV 175

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             A  +   M S G   N+FT+ ++I    + G +  AF L +EM  +G+      YN L
Sbjct: 176 EKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSL 235

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I      G    A +L+ EML +G+ PD +T+T L+ G    G   EA  +F + + +G 
Sbjct: 236 IHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGC 295

Query: 538 AIDHIPFRILKKRYRRMKESDKARDI 563
           A+D   + +L     + K  D+A +I
Sbjct: 296 ALDVNLYNVLIDTLCKSKRLDEAWEI 321



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 112/245 (45%)

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           +RG +P V    TL+  L    + +EA      + K+        +  + +G    G + 
Sbjct: 12  QRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLE 71

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           K+ E L  M           +N +ID + + G    A ++  +M   G+  + +TFN L+
Sbjct: 72  KSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLM 131

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            A  +   +   + L +EM      P+V TY++LI A C  G +  AL+++ +M  RG  
Sbjct: 132 NAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCR 191

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P+I TYT +I G    G++ +A  +F ++ + GL    + +  L     R   +D A  +
Sbjct: 192 PNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKL 251

Query: 564 HQKWL 568
            ++ L
Sbjct: 252 FREML 256



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 88/184 (47%)

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
           F  V ++ G  P   +  T+++ L I     +A E L  + +   + +P I+  +  GY 
Sbjct: 6   FKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYA 65

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
             G L  +      M     +     +N+LI A  + G    A ++ + M   G+ PD +
Sbjct: 66  SAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTY 125

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           T+N+L+ A      +    +L++EM  +  +P++ITY+ LI   C  G +++A +VF  +
Sbjct: 126 TFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDM 185

Query: 533 QTLG 536
           ++ G
Sbjct: 186 KSRG 189


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 216/464 (46%), Gaps = 18/464 (3%)

Query: 79  NEGNPQAVFNALDLILK-----ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGK 133
           N  +P AV     LI K        D  + +  +GP       D   + A++   C  G+
Sbjct: 97  NPPSPAAVGPCAALIKKLCASGRTADARRVLAASGP-------DVMVYNAMVAGYCGAGQ 149

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           +  A   RR +      PD  T+N L+  LC  G    A  V+ +M      P+  TY  
Sbjct: 150 LDAA---RRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTI 206

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            +   C+ +   +A+ L   M + G  P+ VT+N++++ +C++G + DA++FL  +    
Sbjct: 207 LLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNL---P 263

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
                 + ++  I++   F       A  L  +M  K    ++V +N+LI+  C  G + 
Sbjct: 264 SYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVE 323

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A     QM + G  P+ ++YN LL+  CKQ K+ +A  F  ++   G  PD +SY T++
Sbjct: 324 PAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLL 383

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
             LC +G++  A E L  + +K   P    +N +IDG  + G    A  + D M S G+ 
Sbjct: 384 TALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQ 443

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            ++ T++ +     R   I +A     ++   GI P    YN ++   C     H A+ L
Sbjct: 444 PDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDL 503

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           +  M+  G  P+  TYT L++G    G +KEA E+FA++ + G+
Sbjct: 504 FAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 197/426 (46%), Gaps = 11/426 (2%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
            A+I+ LC  G+   A   RR +   G  PDV+ +N +V   C  G L+ A  ++   ++
Sbjct: 108 AALIKKLCASGRTADA---RRVLAASG--PDVMVYNAMVAGYCGAGQLDAARRLV---AD 159

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
           M   P+  TYN  I G C       AL +   M   G  P+ VT+ IL+ A CK+     
Sbjct: 160 MPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQ 219

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A+K L E+    D     D++T  ++++   + G    A+    ++     + + V+YN+
Sbjct: 220 AMKLLDEM---HDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNI 276

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           ++ G         A     +M  +G  P+V+T+N L++ LC++G ++ A      + + G
Sbjct: 277 VLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYG 336

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             P+ +SY  ++   C    I KA EF+  M+ +   P+   +N ++    R G++  A 
Sbjct: 337 CTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAI 396

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   +   G S  + ++N +I   T+ G   +A  L  EM   G+ PD+ TY+ +    
Sbjct: 397 ELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGL 456

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C    I  A++ + ++   GI P    Y  ++ G C R     A ++FA + + G   + 
Sbjct: 457 CREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNE 516

Query: 542 IPFRIL 547
             + IL
Sbjct: 517 STYTIL 522



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 135/259 (52%), Gaps = 3/259 (1%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L  +M  KG  P+V+T N L++ LC+ G +E A  V+ +M +   +PN  +YN  +  +C
Sbjct: 293 LMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFC 352

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +  ++ KA+     M + G  P+ V++N L+ ALC+ G +  A++ L ++    D   + 
Sbjct: 353 KQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQL---KDKGCSP 409

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
            +I+   ++D   K G   +AL L ++M  K +Q DI+ Y+ + +G C    I  A   F
Sbjct: 410 VLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTF 469

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
           C++   G  P    YN +L  LCK+ +   A   +  +  +G  P++ +Y  +++GL   
Sbjct: 470 CKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYE 529

Query: 380 GDIVKAREFLLSMLEKSVV 398
           G + +ARE    +  + VV
Sbjct: 530 GLVKEARELFAQLCSRGVV 548



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 155/340 (45%), Gaps = 16/340 (4%)

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG---DKFQALALWND 286
           +  L ++G L DA++ + + LA  +  + + V     L+     +G   D  + LA    
Sbjct: 74  LRVLVRRGELDDALRLV-DSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVLAASG- 131

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
                   D++ YN ++ G+C  G + +A      M      PD  TYNTL+  LC +G+
Sbjct: 132 -------PDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGR 181

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
              A      + + G  PD ++Y  +++  C      +A + L  M +K   P+   +NV
Sbjct: 182 TSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNV 241

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +++G  + G + +A      + S+G   N  ++N ++          DA  L +EM   G
Sbjct: 242 VLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKG 301

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             P+V T+N+LI   C  G +  A+++ ++M + G TP+ ++Y  L+   C +  + +A 
Sbjct: 302 CPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAM 361

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD-IHQ 565
           E    + + G   D + +  L     R  E D A + +HQ
Sbjct: 362 EFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQ 401


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 229/501 (45%), Gaps = 28/501 (5%)

Query: 81  GNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWL 140
           GN    +N LD     NL  L  ++D  P             A++  L    + G    L
Sbjct: 131 GNTNLAWNILD-----NLMMLNGLKDAAPCN-----------ALLTGLGKAREFGKMNLL 174

Query: 141 RRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM------SEMRPSPNCATYNAF 194
            RKM      P V+T   L+N LCK   ++ A  V  +M      +++  +P+   YN  
Sbjct: 175 MRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTL 234

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           I G C+V   ++AL L   M ++   P   T N L++  C+ G +  A K   E+   ++
Sbjct: 235 IDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEM---EN 291

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
            +   +VIT   L+D   K+     A+  +  M QK ++ + V Y V IN FC   +++ 
Sbjct: 292 AQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNK 351

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A  +  +M K G  PD + Y TL+  L + G+LD+AS     L + G   D++ Y  +I 
Sbjct: 352 AMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLIS 411

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS-IRDLMLSFGVS 433
             C    + +A+E+L  M    V P+   +N +I  + + G+   A   ++ +    G+S
Sbjct: 412 EFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLS 471

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEM--LLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
             VFT+ ALI A     +I +A  + KEM  +   + P+   YN+LI + C    ++ AL
Sbjct: 472 PTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFAL 531

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            L D+M  RG+ P+  TY  + K    +  + +A ++  ++       D+I   IL +  
Sbjct: 532 SLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWL 591

Query: 552 RRMKESDKARDIHQKWLLRNK 572
             + E  K +   Q  + R +
Sbjct: 592 SAVGEITKLKKFTQGCMNRTE 612



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 184/390 (47%), Gaps = 4/390 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD +    L+++LC+ G+   A +++  +  +    + A  NA +TG  +  E  K   L
Sbjct: 115 PDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLL 174

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK---ATSDVITSTIL 267
              M +  I+P  +T  IL++ LCK   + DA++   ++  + +        D I    L
Sbjct: 175 MRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTL 234

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D   K G + +AL L   M           +N LING+C +G+I  A   F +M     
Sbjct: 235 IDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQI 294

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+VIT NTL++ +CK  ++  A  F+ V+ + G+  + ++Y   I   C   ++ KA E
Sbjct: 295 EPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAME 354

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
           FL  M +    P+  ++  +I G  + G L +A S+   +   G   +   +N LI    
Sbjct: 355 FLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFC 414

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML-RRGITPDI 506
           +   +  A     EM L G+ PD  TYN LI     +G+  LA +   +M    G++P +
Sbjct: 415 KKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTV 474

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            TY  LI  +C   N+ EA ++F ++  + 
Sbjct: 475 FTYGALIHAYCLNNNIDEAIKIFKEMNNVA 504



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 184/421 (43%), Gaps = 16/421 (3%)

Query: 160 VNELCKIGDLEKADHVIREMSEMRP-SPNCATYNAFITGYCRVNELDKALHLFSTM--AN 216
           V+ L ++G +   D  +   S +   + N    N  I    +   +D A+++   M    
Sbjct: 10  VHLLRRLGRIGMVDEALAAFSTLDSHAKNTNVRNEIINLLLKSGRVDNAMNVLDEMLLPE 69

Query: 217 NGIRPNRVTHNILVHALCK-KGLLGDAVKFLGEVLADDDGKAT--SDVITSTILMDSYFK 273
           +  RPN  T  I+ + L K  GL G   +     L    GK     D I  T L+    +
Sbjct: 70  SEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCR 129

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           +G+   A  + +++   N   D    N L+ G     +         +M      P VIT
Sbjct: 130 SGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVIT 189

Query: 334 YNTLLNCLCKQGKLDEASHFYGVL------SKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +  L+N LCK  ++D+A   +  +      +K  VAPD I Y T+I GLC  G   +A  
Sbjct: 190 FGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALC 249

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            +  M      P    +N +I+GY R G++  A  + + M +  +  NV T N L+    
Sbjct: 250 LMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMC 309

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +   I  A    + M   G+  +  TY + I A CN+ +++ A++  DEM + G  PD +
Sbjct: 310 KHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAV 369

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
            Y  LI G    G + +A  V +K++  G  +D + + +L   + +  + D+A    Q+W
Sbjct: 370 VYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRA----QEW 425

Query: 568 L 568
           L
Sbjct: 426 L 426



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 170/414 (41%), Gaps = 19/414 (4%)

Query: 156 HNYLVNELCKIGDLEKADHVIREM----SEMRPSPNCA--TYNAF--ITGY-CRVNELDK 206
            N ++N L K G ++ A +V+ EM    SE RP+   A   +N    I G   RV E D+
Sbjct: 42  RNEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKE-DE 100

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
              L S    + I P+ +    L+  LC+ G    A   L  ++  +  K   D      
Sbjct: 101 IAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLK---DAAPCNA 157

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM---- 322
           L+    K  +  +   L   M   NIQ  ++ + +LIN  C    I  A   F +M    
Sbjct: 158 LLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEK 217

Query: 323 --LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
              K    PD I YNTL++ LCK G+ +EA    G +     AP   ++  +I G C  G
Sbjct: 218 EETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSG 277

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
           +I  A +    M    + P     N ++DG  +   +S A     +M   G+  N  T+ 
Sbjct: 278 EIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYT 337

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
             I A     ++  A     EM  DG FPD   Y  LI      G +  A  +  ++   
Sbjct: 338 VFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEA 397

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           G   D + Y  LI   C +  +  A+E   +++  G+  D + +  L   + ++
Sbjct: 398 GFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKI 451



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 71/196 (36%), Gaps = 34/196 (17%)

Query: 52  TLNDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAVFNALDLILKENLDRLKTMRDTGPVR 111
           T N ++SY       K  H F  K ++ EG    VF                        
Sbjct: 440 TYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFT----------------------- 476

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKM--IQKGTVPDVLTHNYLVNELCKIGDL 169
                    + A+I   CL   I  A+ + ++M  +     P+ + +N L++ LCK   +
Sbjct: 477 ---------YGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQV 527

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A  ++ +M      PN  TYN+        N LDKA  L   M      P+ +T  IL
Sbjct: 528 NFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEIL 587

Query: 230 VHALCKKGLLGDAVKF 245
              L   G +    KF
Sbjct: 588 TEWLSAVGEITKLKKF 603


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 201/415 (48%), Gaps = 6/415 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+ +++  L+  LC     ++A  ++R M       +  TY   I G C   E+DKA+ L
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M  +GI PN V ++ L+   CK G   D  K   E+    +     DV+  T L+DS
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEM---SEKGIEPDVVMYTGLIDS 229

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K G   +A  + + M ++ ++ ++V YNVLIN  C  G +  A     +M ++G  PD
Sbjct: 230 LCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD 289

Query: 331 VITYNTLLNCLCKQGKLDEASHFYG--VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           V+TYNTL+  L    ++DEA       V  K  V P+ +++ ++IQGLC  G + +A + 
Sbjct: 290 VVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              M E   +     +N++I G  R   +  A  + D M S G+  + FT++ LI    +
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
              +  A  L   M   GI P++F Y  L+ A C  G +  A  L++EM       D++ 
Sbjct: 410 MWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVA 468

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           Y+ +I G C  G++K A+E+   I   GL  D + + I+   + +  + + A  +
Sbjct: 469 YSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGV 523



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 219/452 (48%), Gaps = 11/452 (2%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D +  + +  L++MR  G     +  D   +  +IR LC   ++  A+ L  +M + G  
Sbjct: 128 DRLADQAVGLLRSMRSAG-----VRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIE 182

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+V+ ++ L+   CK G  E    V  EMSE    P+   Y   I   C+V +  KA  +
Sbjct: 183 PNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGV 242

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   G+ PN VT+N+L++ +CK+G + +A+  L ++    +     DV+T   L+  
Sbjct: 243 MDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKM---SEKGVAPDVVTYNTLIKG 299

Query: 271 YFKNGDKFQALALWNDMFQ-KNI-QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
                +  +A+ L  +M + KNI + ++V +N +I G C  G +  AF     M + G +
Sbjct: 300 LSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCM 359

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
            +++TYN L+  L +  K+ +A      ++  G+ PD  +Y  +I+G C    + +A + 
Sbjct: 360 VNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDL 419

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L +M ++ + PE   +  ++      G +  A ++ + M       +V  ++ +I    +
Sbjct: 420 LSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACK 478

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +  A  L K ++ +G+ PD  TY+++I      G +  A  +  +M   G  PD+  
Sbjct: 479 AGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAV 538

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           +  LI+G+  +G + +  E+  ++ T  +A+D
Sbjct: 539 FDSLIQGYSTKGEINKVLELIREMITKNIALD 570



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 180/383 (46%), Gaps = 37/383 (9%)

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMA---NNGIRPNRVTHNILVHALCKKGLLGDAV 243
           +  +YN  +T  CR    D+A  L   M+   +   RPN V++ +L+ ALC   L   AV
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 244 KFL--------------------GEVLADDDGKATS------------DVITSTILMDSY 271
             L                    G   A +  KA              +V+  + L+  Y
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K+G       ++ +M +K I+ D+V Y  LI+  C  G    A      M++RG  P+V
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TYN L+NC+CK+G + EA      +S+ GVAPD ++Y T+I+GL    ++ +A   L  
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 392 MLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
           M+    + +P++  +N +I G    G +  AF +R +M   G   N+ T+N LI    R 
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             +  A  L  EM   G+ PD FTY++LI   C +  +  A  L   M  RGI P++  Y
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHY 435

Query: 510 TELIKGHCARGNMKEAEEVFAKI 532
             L+   C +G M+ A  +F ++
Sbjct: 436 IPLLVAMCEQGMMERARNLFNEM 458



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 164/327 (50%), Gaps = 5/327 (1%)

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           LG+A   L  + +  D  + + V+T+      + + G   +A++L         + + V+
Sbjct: 61  LGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEP---HPACRPNAVS 117

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y VL+   C +     A      M   G   DV+TY TL+  LC   ++D+A    G + 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           ++G+ P+ + Y +++QG C  G      +  + M EK + P+  ++  +ID   + G   
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  + D+M+  G+  NV T+N LI    + GS+ +A  + K+M   G+ PDV TYN LI
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 479 GASCNLGHIHLALQLYDEMLRRG--ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
               ++  +  A+ L +EM+R    + P+++T+  +I+G C  G M++A +V A ++  G
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDI 563
             ++ + + +L     R+ +  KA ++
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMEL 384



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 153/312 (49%), Gaps = 11/312 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV--P 151
           +KE +  LK M + G     +  D   +  +I+ L    ++  A+WL  +M++   +  P
Sbjct: 271 VKEAIGVLKKMSEKG-----VAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKP 325

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           +V+T N ++  LC IG + +A  V   M E     N  TYN  I G  RV+++ KA+ L 
Sbjct: 326 NVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELM 385

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M + G+ P+  T++IL+   CK   +  A   L  +    D     ++     L+ + 
Sbjct: 386 DEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTM---RDRGIEPELFHYIPLLVAM 442

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            + G   +A  L+N+M   N   D+VAY+ +I+G C  GD+ +A      ++  G  PD 
Sbjct: 443 CEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDA 501

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TY+ ++N   K G ++ A+     ++ +G  PD   + ++IQG    G+I K  E +  
Sbjct: 502 VTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIRE 561

Query: 392 MLEKSVVPEPHI 403
           M+ K++  +  I
Sbjct: 562 MITKNIALDSKI 573



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 105/272 (38%), Gaps = 49/272 (18%)

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           CL +  +L        +L       D +SY T++  LC  G   +A   L +M   S+ P
Sbjct: 51  CLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAM---SLEP 107

Query: 400 EPH-----------------------------------------IWNVIIDGYGRCGDLS 418
            P                                           +  +I G     ++ 
Sbjct: 108 HPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVD 167

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   M   G+  NV  +++L+    + G   D   +  EM   GI PDV  Y  LI
Sbjct: 168 KAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLI 227

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            + C +G    A  + D M+RRG+ P+++TY  LI   C  G++KEA  V  K+   G+A
Sbjct: 228 DSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVA 287

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            D + +  L K    + E D+A      WLL 
Sbjct: 288 PDVVTYNTLIKGLSDVLEMDEA-----MWLLE 314


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 198/409 (48%), Gaps = 4/409 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  VI  LC    +  A  +  +M+QKG VPD +T+  L++   K   +++A  ++  M 
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
              P P   TY + + G+C+++ +++A  + + M   G  P       L+     KG   
Sbjct: 241 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 300

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A + L E+ A        DVI  T L+D  F  G   +A  +++ M +K    D + Y 
Sbjct: 301 EAYQVLTEMTARG---CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYG 357

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I  F   G++ +A      M K G  PD   YN+L++   K  ++D+A   Y  +  +
Sbjct: 358 TIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVAS 417

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI-WNVIIDGYGRCGDLSN 419
           G+ P+ +++  ++ GL   G   +A      MLEK  VP   + + ++IDG G+ G +S 
Sbjct: 418 GIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSE 477

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AF     M+  G+     T+ +LI +  + G I +A  L ++M+  G+ PDV  Y+ LI 
Sbjct: 478 AFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALIT 537

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
              +   +  A  ++ EM++RG  P+ +TY  L +G  A G   + E V
Sbjct: 538 GLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV 586



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 218/503 (43%), Gaps = 77/503 (15%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + +VI   C  G + T  +  R +  K ++ DV+++  ++  L     +++A  +  E+ 
Sbjct: 79  YTSVIHGYCKAGDLDTGYF--RAVTPKASL-DVISYTTVIKGLADSKRIDEACELFEELK 135

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               SPN   Y A I G  +   ++  L  F  M+ +   P R T+ +++  LCK  +L 
Sbjct: 136 TAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLP 195

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA K   +++         D IT T L+D + K     +A  L + M  K  +   V Y 
Sbjct: 196 DACKVFEQMVQKG---CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYG 252

Query: 301 VLINGFC-----------------------------------LNGDISSAFAYFCQMLKR 325
            +++GFC                                     G    A+    +M  R
Sbjct: 253 SIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTAR 312

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  PDVI Y +L++ L   G++ EA H +  + + G APD ++Y TIIQ     G++  A
Sbjct: 313 GCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAA 372

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E L  M +  V P+   +N ++DGY +   +  AF + D M++ G+  N  TFN L+  
Sbjct: 373 GEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHG 432

Query: 446 ETRGGSIFDAFSLKKEML-----------------------------------LD-GIFP 469
             + G    AFSL KEML                                   +D GI P
Sbjct: 433 LFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIP 492

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           +  TY  LI +    G I  A +L ++M++ G+ PD+  Y+ LI G      +  A +VF
Sbjct: 493 ECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVF 552

Query: 530 AKIQTLGLAIDHIPFRILKKRYR 552
            ++   G A + + +++L++ +R
Sbjct: 553 QEMMKRGCAPNEVTYKVLRRGFR 575



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 214/470 (45%), Gaps = 7/470 (1%)

Query: 106 DTGPVRCTLET---DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNE 162
           DTG  R        D   +  VI+ L    +I  A  L  ++   G  P+V+ +  +++ 
Sbjct: 93  DTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDG 152

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           L K G +E       EMS     P   TY   I G C+   L  A  +F  M   G  P+
Sbjct: 153 LLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPD 212

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
            +T+  L+    K   + +A K L +V+     + T+  +T   ++  + K     +A  
Sbjct: 213 TITYTTLIDGFSKASKMDEARKLL-DVMLTKGPEPTA--VTYGSIVHGFCKLDMINEAKE 269

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           +   M ++  +  +  +  L++ +   G    A+    +M  RG  PDVI Y +L++ L 
Sbjct: 270 VIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLF 329

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
             G++ EA H +  + + G APD ++Y TIIQ     G++  A E L  M +  V P+  
Sbjct: 330 STGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCF 389

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +N ++DGY +   +  AF + D M++ G+  N  TFN L+    + G    AFSL KEM
Sbjct: 390 AYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEM 449

Query: 463 L-LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           L  + + P + +Y +LI      G +  A   + EM+ RGI P+  TYT LI      G 
Sbjct: 450 LEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGR 509

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           + EA+++   +  LG+  D   +  L          D A D+ Q+ + R 
Sbjct: 510 IPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRG 559



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 183/415 (44%), Gaps = 28/415 (6%)

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG---- 237
           M   P   +YN  I+G   ++++D+A   F++M +NG  P+ +    L+H  CK G    
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 238 ---LLGDAVK------FL------GEVLADD---------DGKATSDVITSTILMDSYFK 273
              LL  A+K      FL      G   A D           KA+ DVI+ T ++     
Sbjct: 61  GHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           +    +A  L+ ++       ++VAY  +I+G    G I      F +M     +P   T
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y  +++ LCK   L +A   +  + + G  PD I+Y T+I G      + +AR+ L  ML
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            K   P    +  I+ G+ +   ++ A  +   M   G    +F F +L+      G   
Sbjct: 241 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 300

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A+ +  EM   G  PDV  Y  LI    + G +  A  ++D M+ +G  PD +TY  +I
Sbjct: 301 EAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTII 360

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +     GN++ A E+   +   G+  D   +  L   Y +++  D+A  ++ + +
Sbjct: 361 QNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 415



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/449 (23%), Positives = 198/449 (44%), Gaps = 7/449 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  L    K+  A      MI  G  PDV+    L++  CK G   +  H +   +  R
Sbjct: 13  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHKLLNQALKR 71

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   Y + I GYC+  +LD       T   +    + +++  ++  L     + +A 
Sbjct: 72  FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKAS---LDVISYTTVIKGLADSKRIDEAC 128

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+        + +V+  T ++D   K G     L  + +M   +       Y V+I
Sbjct: 129 ELFEEL---KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVI 185

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C    +  A   F QM+++G +PD ITY TL++   K  K+DEA     V+   G  
Sbjct: 186 DGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE 245

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P  ++Y +I+ G C    I +A+E +  M E+   P   I+  ++  Y   G    A+ +
Sbjct: 246 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 305

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M + G + +V  + +LI      G + +A  +   M+  G  PD  TY  +I     
Sbjct: 306 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSK 365

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           +G++  A ++ + M + G+ PD   Y  L+ G+     + +A  V+ ++   G+  + + 
Sbjct: 366 IGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVT 425

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLRNK 572
           F +L     +  ++D+A  + ++ L + +
Sbjct: 426 FNVLMHGLFKDGKTDRAFSLFKEMLEKEE 454


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 229/493 (46%), Gaps = 43/493 (8%)

Query: 90  LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
           LD +L EN  ++     +   +  +E +   +  +++ LC   ++  A  L  +M  KG 
Sbjct: 153 LDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGC 212

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            PD +++  L++ LCK+G +++A    RE++ M  +P+   YNA I G C+    ++A  
Sbjct: 213 DPDEVSYTTLISSLCKLGKVKEA----RELA-MSFTPSVPVYNALINGVCKEYTFEEAFQ 267

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L   M N GI PN +++  +++AL   G +  ++  L ++ A      + ++ T T L+ 
Sbjct: 268 LLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG---CSPNLHTFTSLIK 324

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
            +F  G   +AL  W+ M ++ +  ++VAYN L++G C    +  A + F QM   G  P
Sbjct: 325 GFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCP 384

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY-------------------- 369
           +V TY+ L++   K G LD AS  +  +   G  P+ ++Y                    
Sbjct: 385 NVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLI 444

Query: 370 ---------------KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
                           T I+GLC  G +  A +    M      P    +N ++D   + 
Sbjct: 445 ENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKD 504

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
                AF +   M   G+  N+ T+N +I      G + +A  L  +M++ G  PD  T 
Sbjct: 505 RRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITV 564

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N++I A C  G +++A+QL D +      PDII YT LI G C    ++EA     ++ +
Sbjct: 565 NIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLS 624

Query: 535 LGLAIDHIPFRIL 547
            G++ +   + +L
Sbjct: 625 EGISPNVATWNVL 637



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 194/465 (41%), Gaps = 43/465 (9%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           ++VI      G    AL    +M      P V  +N++++ L      +  + +   M +
Sbjct: 115 ISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               PN  TYN  +   C+ N +D A  L   M++ G  P+ V++  L+ +LCK G + +
Sbjct: 175 DGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKE 234

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A +             T  V     L++   K     +A  L ++M  K I  ++++Y  
Sbjct: 235 ARELAMSF--------TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTT 286

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +IN     G++  + A   +M  RG  P++ T+ +L+     +G   EA  F+  + + G
Sbjct: 287 IINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V P+ ++Y  ++ GLC    +  A      M      P    ++ +IDGY + GDL  A 
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGAS 406

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + + M++ G   NV  +  ++    R      A+ L + M ++   P+  T+N  I   
Sbjct: 407 EVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466

Query: 482 CNLGHIHLALQLYDE-----------------------------------MLRRGITPDI 506
           C  G +  A++++D+                                   M  RGI  ++
Sbjct: 467 CGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNL 526

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +TY  +I G+C  G + EA E+  K+   G   D I   I+   Y
Sbjct: 527 VTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAY 571



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 196/444 (44%), Gaps = 40/444 (9%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L  +L +L  +++   +  +       + A+I  +C       A  L  +M+ KG  P+V
Sbjct: 222 LISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNV 281

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +++  ++N L   G++E +  V+ +M     SPN  T+ + I G+       +AL  +  
Sbjct: 282 ISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDR 341

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G+ PN V +N L+H LC K  LGDAV    ++   +      +V T + L+D Y K
Sbjct: 342 MIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM---EINGCCPNVRTYSALIDGYAK 398

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAY---------------------------------- 299
            GD   A  +WN M       ++VAY                                  
Sbjct: 399 AGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVT 458

Query: 300 -NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
            N  I G C +G +  A   F QM   G  P+  TYN LL+ L K  +  EA      + 
Sbjct: 459 FNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDME 518

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G+  + ++Y TII G C  G + +A E L  M+ +   P+    N++ID Y + G ++
Sbjct: 519 HRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVN 578

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  + D + +     ++  + +LI        + +A    + ML +GI P+V T+N+L+
Sbjct: 579 IAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638

Query: 479 -GASCNLGHIHLALQLYDEMLRRG 501
                N+GH   A+Q  D +L  G
Sbjct: 639 RHLFSNMGHSG-AVQFLDAVLGSG 661



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 176/364 (48%), Gaps = 10/364 (2%)

Query: 207 ALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           AL  F ++AN+   +   +T+ +++  L  +  + D V++L + +  +    + D+  S 
Sbjct: 59  ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREM-DCVQYLLQQMKLEGISCSEDLFISV 117

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           I   SY + G   QAL  +  M    ++  +  YN +++              +  M K 
Sbjct: 118 I--GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKD 175

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  P+V TYN LL  LCK  ++D A      +S  G  PD++SY T+I  LC  G + +A
Sbjct: 176 GMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA 235

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           RE  +S       P   ++N +I+G  +      AF + D M++ G+  NV ++  +I A
Sbjct: 236 RELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
            +  G++  + ++  +M   G  P++ T+  LI      G  H AL  +D M+R G+ P+
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPN 350

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           ++ Y  L+ G C++ ++ +A  VF +++  G   +   +  L   Y +  + D A ++  
Sbjct: 351 VVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEV-W 409

Query: 566 KWLL 569
            W++
Sbjct: 410 NWMI 413



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 3/203 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I+ LC  G++  A+ +  +M   G  P+  T+N L++ L K     +A  ++++M     
Sbjct: 463 IKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
             N  TYN  I GYC    L +AL L   M   G +P+ +T NI++ A CK+G +  A++
Sbjct: 523 ELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQ 582

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            +  + A   GK   D+I  T L+     +    +A+     M  + I  ++  +NVL+ 
Sbjct: 583 LMDRLSA---GKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVR 639

Query: 305 GFCLNGDISSAFAYFCQMLKRGF 327
               N   S A  +   +L  GF
Sbjct: 640 HLFSNMGHSGAVQFLDAVLGSGF 662


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 223/449 (49%), Gaps = 18/449 (4%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  V+  LC   K+  A+   R    K   P V++ N +++  CK+G ++ A      + 
Sbjct: 203 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 262

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    P+  ++N  I G C V  + +AL L S M  +G+ P+ VT+NIL       G++ 
Sbjct: 263 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 322

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD-IVAY 299
            A + + ++L   D   + DVIT TIL+    + G+    L L  DM  +  + + I+  
Sbjct: 323 GAWEVIRDML---DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 379

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           +V+++G C  G I  A + F QM   G  PD++ Y+ +++ LCK GK D A   Y  +  
Sbjct: 380 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 439

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
             + P+  ++  ++ GLC  G +++AR  L S++      +  ++N++IDGY + G +  
Sbjct: 440 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 499

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +  +++  G++ +V TFN+LI    +  +I +A  +   + L G+ P V +Y  L+ 
Sbjct: 500 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 559

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE------AEEVFAK-- 531
           A  N G+     +L  EM   GI P  +TY+ + KG C RG   E       E +F K  
Sbjct: 560 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVLRERIFEKCK 618

Query: 532 -----IQTLGLAIDHIPFRILKKRYRRMK 555
                +++ G+  D I +  + +   R+K
Sbjct: 619 QGLRDMESEGIPPDQITYNTIIQYLCRVK 647



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 200/398 (50%), Gaps = 8/398 (2%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++ +V+ LC+   LE A   +R        P+  ++N+ ++GYC++  +D A   F T+
Sbjct: 202 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 261

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK--ATSDVITSTILMDSYF 272
              G+ P+  +HNIL++ LC  G + +A++     LA D  K     D +T  IL   + 
Sbjct: 262 LKCGLVPSVYSHNILINGLCLVGSIAEALE-----LASDMNKHGVEPDSVTYNILAKGFH 316

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF-LPDV 331
             G    A  +  DM  K +  D++ Y +L+ G C  G+I         ML RGF L  +
Sbjct: 317 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 376

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           I  + +L+ LCK G++DEA   +  +   G++PD ++Y  +I GLC  G    A      
Sbjct: 377 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 436

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M +K ++P       ++ G  + G L  A S+ D ++S G + ++  +N +I    + G 
Sbjct: 437 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 496

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           I +A  L K ++  GI P V T+N LI   C   +I  A ++ D +   G+ P +++YT 
Sbjct: 497 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 556

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           L+  +   GN K  +E+  +++  G+   ++ + ++ K
Sbjct: 557 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK 594



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 214/474 (45%), Gaps = 16/474 (3%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++C L      H  +I  LCL G I  AL L   M + G  PD +T+N L      +G +
Sbjct: 262 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 321

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH-NI 228
             A  VIR+M +   SP+  TY   + G C++  +D  L L   M + G   N +   ++
Sbjct: 322 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 381

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++  LCK G + +A+    ++ AD     + D++  +I++    K G    AL L+++M 
Sbjct: 382 MLSGLCKTGRIDEALSLFNQMKADG---LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 438

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            K I  +   +  L+ G C  G +  A +    ++  G   D++ YN +++   K G ++
Sbjct: 439 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 498

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA   + V+ +TG+ P   ++ ++I G C   +I +AR+ L  +    + P    +  ++
Sbjct: 499 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 558

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS-----------IFDAFS 457
           D Y  CG+  +   +R  M + G+     T++ +     RG             IF+   
Sbjct: 559 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 618

Query: 458 LK-KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
              ++M  +GI PD  TYN +I   C + H+  A    + M  R +     TY  LI   
Sbjct: 619 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 678

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           C  G +++A+     +Q   +++    +  L K +    + + A  +  + L R
Sbjct: 679 CVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 732



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 210/453 (46%), Gaps = 21/453 (4%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKG-TVPDVLTHNYL 159
           ++ M D G     L  D   +  ++   C  G I   L L + M+ +G  +  ++  + +
Sbjct: 328 IRDMLDKG-----LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 382

Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
           ++ LCK G +++A  +  +M     SP+   Y+  I G C++ + D AL L+  M +  I
Sbjct: 383 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 442

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            PN  TH  L+  LC+KG+L +A   L  +++  +   T D++   I++D Y K+G   +
Sbjct: 443 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE---TLDIVLYNIVIDGYAKSGCIEE 499

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           AL L+  + +  I   +  +N LI G+C   +I+ A      +   G  P V++Y TL++
Sbjct: 500 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 559

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC---IHGD---IVKAREF----- 388
                G           +   G+ P  ++Y  I +GLC    H +   +++ R F     
Sbjct: 560 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 619

Query: 389 -LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L  M  + + P+   +N II    R   LS AF   ++M S  + ++  T+N LI +  
Sbjct: 620 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 679

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G I  A S    +    +    F Y  LI A C  G   +A++L+ ++L RG    I 
Sbjct: 680 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 739

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            Y+ +I   C R  + E++  F  + + G++ D
Sbjct: 740 DYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 772



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 203/458 (44%), Gaps = 86/458 (18%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           RK    G V D+L   +L + L  + D   + +++++M +   + +  +YN+ +  +   
Sbjct: 131 RKWESTGLVWDMLL--FLSSRLRMVDD---SLYILKKMKDQNLNVSTQSYNSVLYHF--- 182

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            E DK   ++  + +     N  T++ +V  LC++  L DAV FL           TS+ 
Sbjct: 183 RETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFL----------RTSE- 227

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
                                 W     K+I   +V++N +++G+C  G +  A ++FC 
Sbjct: 228 ----------------------W-----KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 260

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           +LK G +P V ++N L+N LC  G + EA      ++K GV PD ++Y  + +G  + G 
Sbjct: 261 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 320

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN-VFTFN 440
           I  A E +  ML+K + P+   + +++ G  + G++     +   MLS G   N +   +
Sbjct: 321 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 380

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            ++    + G I +A SL  +M  DG+ PD+  Y+++I   C LG   +AL LYDEM  +
Sbjct: 381 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 440

Query: 501 GITP-----------------------------------DIITYTELIKGHCARGNMKEA 525
            I P                                   DI+ Y  +I G+   G ++EA
Sbjct: 441 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 500

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            E+F  +   G+      F  L   Y + +   +AR I
Sbjct: 501 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 538



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 184/424 (43%), Gaps = 30/424 (7%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E L     M+  G     L  D   +  VI  LC  GK   ALWL  +M  K  +P+ 
Sbjct: 392 IDEALSLFNQMKADG-----LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNS 446

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            TH  L+  LC+ G L +A  ++  +     + +   YN  I GY +   +++AL LF  
Sbjct: 447 RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 506

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           +   GI P+  T N L++  CK   + +A K L  +     G A S V++ T LMD+Y  
Sbjct: 507 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL--YGLAPS-VVSYTTLMDAYAN 563

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC-------LNGDISSAFAYFCQ----- 321
            G+      L  +M  + I    V Y+V+  G C        N  +       C+     
Sbjct: 564 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD 623

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M   G  PD ITYNT++  LC+   L  A  F  ++    +     +Y  +I  LC++G 
Sbjct: 624 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 683

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           I KA  F+ S+ E++V      +  +I  +   GD   A  +   +L  G + ++  ++A
Sbjct: 684 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSA 743

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I    R   + ++      ML  GI PD+    ++I +           +L    ++ G
Sbjct: 744 VINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIKSD----------ELLSWTIKWG 793

Query: 502 ITPD 505
           + PD
Sbjct: 794 LLPD 797


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 224/454 (49%), Gaps = 18/454 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  V+  LC   K+  A+   R    K   P V++ N +++  CK+G ++ A      + 
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    P+  ++N  I G C V  + +AL L S M  +G+ P+ VT+NIL       G++ 
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD-IVAY 299
            A + + ++L   D   + DVIT TIL+    + G+    L L  DM  +  + + I+  
Sbjct: 310 GAWEVIRDML---DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 366

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           +V+++G C  G I  A + F QM   G  PD++ Y+ +++ LCK GK D A   Y  +  
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
             + P+  ++  ++ GLC  G +++AR  L S++      +  ++N++IDGY + G +  
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +  +++  G++ +V TFN+LI    +  +I +A  +   + L G+ P V +Y  L+ 
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE------AEEVFAK-- 531
           A  N G+     +L  EM   GI P  +TY+ + KG C RG   E       E +F K  
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVLRERIFEKCK 605

Query: 532 -----IQTLGLAIDHIPFRILKKRYRRMKESDKA 560
                +++ G+  D I +  + +   R+K    A
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 639



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 200/398 (50%), Gaps = 8/398 (2%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++ +V+ LC+   LE A   +R        P+  ++N+ ++GYC++  +D A   F T+
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK--ATSDVITSTILMDSYF 272
              G+ P+  +HNIL++ LC  G + +A++     LA D  K     D +T  IL   + 
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALE-----LASDMNKHGVEPDSVTYNILAKGFH 303

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF-LPDV 331
             G    A  +  DM  K +  D++ Y +L+ G C  G+I         ML RGF L  +
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           I  + +L+ LCK G++DEA   +  +   G++PD ++Y  +I GLC  G    A      
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 423

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M +K ++P       ++ G  + G L  A S+ D ++S G + ++  +N +I    + G 
Sbjct: 424 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           I +A  L K ++  GI P V T+N LI   C   +I  A ++ D +   G+ P +++YT 
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           L+  +   GN K  +E+  +++  G+   ++ + ++ K
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK 581



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 214/474 (45%), Gaps = 16/474 (3%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++C L      H  +I  LCL G I  AL L   M + G  PD +T+N L      +G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH-NI 228
             A  VIR+M +   SP+  TY   + G C++  +D  L L   M + G   N +   ++
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++  LCK G + +A+    ++ AD     + D++  +I++    K G    AL L+++M 
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADG---LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            K I  +   +  L+ G C  G +  A +    ++  G   D++ YN +++   K G ++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA   + V+ +TG+ P   ++ ++I G C   +I +AR+ L  +    + P    +  ++
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS-----------IFDAFS 457
           D Y  CG+  +   +R  M + G+     T++ +     RG             IF+   
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605

Query: 458 LK-KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
              ++M  +GI PD  TYN +I   C + H+  A    + M  R +     TY  LI   
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           C  G +++A+     +Q   +++    +  L K +    + + A  +  + L R
Sbjct: 666 CVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 719



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 200/435 (45%), Gaps = 21/435 (4%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKG-TVPDVLTHNYL 159
           ++ M D G     L  D   +  ++   C  G I   L L + M+ +G  +  ++  + +
Sbjct: 315 IRDMLDKG-----LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369

Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
           ++ LCK G +++A  +  +M     SP+   Y+  I G C++ + D AL L+  M +  I
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            PN  TH  L+  LC+KG+L +A   L  +++  +   T D++   I++D Y K+G   +
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE---TLDIVLYNIVIDGYAKSGCIEE 486

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           AL L+  + +  I   +  +N LI G+C   +I+ A      +   G  P V++Y TL++
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC---IHGD---IVKAREF----- 388
                G           +   G+ P  ++Y  I +GLC    H +   +++ R F     
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606

Query: 389 -LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L  M  + + P+   +N II    R   LS AF   ++M S  + ++  T+N LI +  
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G I  A S    +    +    F Y  LI A C  G   +A++L+ ++L RG    I 
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726

Query: 508 TYTELIKGHCARGNM 522
            Y+ +I   C R  M
Sbjct: 727 DYSAVINRLCRRHLM 741



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 202/458 (44%), Gaps = 86/458 (18%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           RK    G V D+L   +L + L  + D   + +++++M +   + +  +YN+ +  +   
Sbjct: 118 RKWESTGLVWDMLL--FLSSRLRMVDD---SLYILKKMKDQNLNVSTQSYNSVLYHF--- 169

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            E DK   ++  + +     N  T++ +V  LC++  L DAV FL           TS+ 
Sbjct: 170 RETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFL----------RTSE- 214

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
                                 W D     I   +V++N +++G+C  G +  A ++FC 
Sbjct: 215 ----------------------WKD-----IGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           +LK G +P V ++N L+N LC  G + EA      ++K GV PD ++Y  + +G  + G 
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN-VFTFN 440
           I  A E +  ML+K + P+   + +++ G  + G++     +   MLS G   N +   +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            ++    + G I +A SL  +M  DG+ PD+  Y+++I   C LG   +AL LYDEM  +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427

Query: 501 GITP-----------------------------------DIITYTELIKGHCARGNMKEA 525
            I P                                   DI+ Y  +I G+   G ++EA
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            E+F  +   G+      F  L   Y + +   +AR I
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 214/462 (46%), Gaps = 14/462 (3%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
            +D  + + D  P+R     D   + A+I   C  G+I  A+ L  +M Q    PD+  +
Sbjct: 61  QVDVARDLFDKMPLR-GFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMY 115

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
             LV  LCK G  E+   ++R M E+   P+   Y A +   C   +  +A  +   M  
Sbjct: 116 AALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFE 175

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G+ P  VT   +++A CK+G + DA++ L E++     K   +V T   L+  +   G 
Sbjct: 176 KGLAPCVVTCTAVINAYCKEGRMSDALRVL-ELMKLRGCKP--NVWTYNALVQGFCNEGK 232

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A+AL N M    +  D V YN+LI G C++G I SAF     M   G + D  TYN 
Sbjct: 233 VHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNA 292

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L+N LCK G+ D+A   +  L   G+ P+ +++ ++I GLC  G +  A +FL  M+   
Sbjct: 293 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAG 352

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI---LAETRGGSIF 453
             P+ + ++  I+   +        S    ML   V  +   +  +I   L E   G + 
Sbjct: 353 CTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVA 412

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
             +    EM+  G  PDV TY   + A C  G ++ A  +  EM + G+T D + Y  L+
Sbjct: 413 RTWG---EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLM 469

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
            GH + G    A  +  ++ ++    +   + IL +   RM+
Sbjct: 470 DGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 511



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/479 (24%), Positives = 211/479 (44%), Gaps = 42/479 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AVIR LC    + +AL     M++ G  PD  T N L+   C+   ++ A  +  +M   
Sbjct: 16  AVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLR 75

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             + +  +Y A I G+C    +D+A+ LF  M     +P+   +  LV  LCK G  G+ 
Sbjct: 76  GFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGR-GEE 130

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              +   + +   + ++    + +    + +     +A  +  +MF+K +   +V    +
Sbjct: 131 GLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAK--EAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           IN +C  G +S A      M  RG  P+V TYN L+   C +GK+ +A      +   GV
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD ++Y  +I+G CI G I  A   L  M    ++ + + +N +I+   + G    A S
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D + + G+  N  TFN+LI    + G +  A+   ++M+  G  PD +TY+  I   C
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368

Query: 483 NLGHIHLALQLYDEMLRR-----------------------------------GITPDII 507
            +      L    EML++                                   G  PD++
Sbjct: 369 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVV 428

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           TYT  ++ +C  G + EAE V  ++   G+ +D + +  L   +  + ++D A  I ++
Sbjct: 429 TYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 487



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 135/556 (24%), Positives = 231/556 (41%), Gaps = 95/556 (17%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L  L+ M++ G    T     R + AV+   C   K   A  + ++M +KG  P V+
Sbjct: 129 EEGLLMLRRMKELGWRPST-----RAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVV 183

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T   ++N  CK G +  A  V+  M      PN  TYNA + G+C   ++ KA+ L + M
Sbjct: 184 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKM 243

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G+ P+ VT+N+L+   C  G +  A + L   L + DG   +D  T   L+++  K+
Sbjct: 244 RVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLR--LMEGDG-LIADQYTYNALINALCKD 300

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   QA +L++ +  + I+ + V +N LING C +G +  A+ +  +M+  G  PD  TY
Sbjct: 301 GRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTY 360

Query: 335 NTLLNCLCKQGKLDEASHF----------------------------YGVLSKT------ 360
           ++ +  LCK     E   F                            YG++++T      
Sbjct: 361 SSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVS 420

Query: 361 -GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G  PD ++Y T ++  CI G + +A   L+ M +  V  +   +N ++DG+   G   +
Sbjct: 421 SGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDH 480

Query: 420 AFSIRDLMLSFGVSSNVFTFNAL------------ILAETRGG-----SIFDAFSLKKEM 462
           A SI   M S     N FT+  L            +L  T  G      + D F L   M
Sbjct: 481 AVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVM 540

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD--------------------------- 495
             +   P+  TY+ ++      G    A  L                             
Sbjct: 541 KKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRY 600

Query: 496 --------EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
                    M++ G  P +++Y  L+ G    G   +A+E+F   +    + D I ++++
Sbjct: 601 LDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVI 660

Query: 548 KKRYRRMKESDKARDI 563
                +   SD +R++
Sbjct: 661 IDGLIKKGHSDISREM 676



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 164/371 (44%), Gaps = 7/371 (1%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           TYNA I   CR  +L  AL   S M  +G RP+  T N L+   C+   +  A     ++
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
                 +   DV++   L++ + + G   +A+ L+ +M     Q D+  Y  L+ G C  
Sbjct: 73  PLRGFAQ---DVVSYAALIEGFCETGRIDEAVELFGEM----DQPDMHMYAALVKGLCKA 125

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G          +M + G+ P    Y  +++  C + K  EA      + + G+AP  ++ 
Sbjct: 126 GRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTC 185

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             +I   C  G +  A   L  M  +   P    +N ++ G+   G +  A ++ + M  
Sbjct: 186 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRV 245

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            GV+ +  T+N LI  +   G I  AF L + M  DG+  D +TYN LI A C  G    
Sbjct: 246 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 305

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A  L+D +  RGI P+ +T+  LI G C  G +  A +   K+ + G   D   +    +
Sbjct: 306 ACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIE 365

Query: 550 RYRRMKESDKA 560
              +MK S + 
Sbjct: 366 HLCKMKGSQEG 376



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 131/269 (48%), Gaps = 19/269 (7%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+  G  PDV+T+   +   C  G L +A++V+ EMS+   + +   YN  + G+  + 
Sbjct: 417 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG 476

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF----------------L 246
           + D A+ +   M +    PN+ T+ IL+  L +  L+ D +                  L
Sbjct: 477 QTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGL 536

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            +V+  ++    S   +S  +++ + ++G   +A +L + M + +I  +   Y  L+  F
Sbjct: 537 FDVMKKNEFLPNSGTYSS--ILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCF 594

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C +     A+   C M++ GF+P +++Y  LL+ L  +G+ D+A   +        +PD+
Sbjct: 595 CKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDE 654

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           I +K II GL   G    +RE ++ MLE+
Sbjct: 655 IVWKVIIDGLIKKGHSDISREMII-MLER 682



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/277 (20%), Positives = 110/277 (39%), Gaps = 20/277 (7%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +   +R  C+ G++  A  +  +M + G   D + +N L++    IG  + A  ++
Sbjct: 426 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 485

Query: 177 REMSEMRPSPNCATYNAFI-----------------TGYCRVNELDKALHLFSTMANNGI 219
           ++M+ +   PN  TY   +                  G  +  EL     LF  M  N  
Sbjct: 486 KQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEF 545

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            PN  T++ ++    + G   +A   +  ++ +D      D+ T+  L+  + K+     
Sbjct: 546 LPNSGTYSSILEGFSEDGRTEEATSLVS-LMKEDSISLNEDIYTA--LVTCFCKSKRYLD 602

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  L   M Q      +++Y  L++G    G    A   F     + + PD I +  +++
Sbjct: 603 AWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIID 662

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            L K+G  D +     +L +    P   +Y  + + L
Sbjct: 663 GLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 699



 Score = 45.4 bits (106), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 44/91 (48%)

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TYN +I + C    +  AL+    M+R G  PD  T+  LI G+C    +  A ++F K+
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
              G A D + +  L + +      D+A ++
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVEL 103


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 203/418 (48%), Gaps = 6/418 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+ +++  L+  LC     ++A  ++R M       +  TY   I G C   E+DKA+ L
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M  +GI PN V ++ L+   CK G   D  K   E+    +     DV+  T L+DS
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEM---SEKGIEPDVVMYTGLIDS 229

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K G   +A  + + M ++ ++ ++V YNVLIN  C  G +  A     +M ++G  PD
Sbjct: 230 LCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPD 289

Query: 331 VITYNTLLNCLCKQGKLDEASHFYG--VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           V+TYNTL+  L    ++DEA       V  K  V P+ +++ ++IQGLC  G + +A + 
Sbjct: 290 VVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV 349

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              M E   +     +N++I G  R   +  A  + D M S G+  + FT++ LI    +
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
              +  A  L   M   GI P++F Y  L+ A C  G +  A  L++EM       D++ 
Sbjct: 410 MWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVA 468

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           Y+ +I G C  G++K A+E+   I   GL  D + + I+   + +  + + A  + ++
Sbjct: 469 YSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQ 526



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 217/454 (47%), Gaps = 8/454 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++R LC       A+ L R M   G   DV+T+  L+  LC   +++KA  ++ EM 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    PN   Y++ + GYC+    +    +F  M+  GI P+ V +  L+ +LCK   +G
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK---VG 234

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A K  G +          +V+T  +L++   K G   +A+ +   M +K +  D+V YN
Sbjct: 235 KAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYN 294

Query: 301 VLINGFCLNGDISSAFAYFCQML--KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
            LI G     ++  A     +M+  K    P+V+T+N+++  LC  G++ +A     ++ 
Sbjct: 295 TLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMME 354

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           +TG   + ++Y  +I GL     + KA E +  M    + P+   ++++I G+ +   + 
Sbjct: 355 ETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVD 414

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP-DVFTYNLL 477
            A  +   M   G+   +F +  L++A    G +  A +L  EM  D  FP DV  Y+ +
Sbjct: 415 RAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM--DNNFPLDVVAYSTM 472

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I  +C  G +  A +L   ++  G+TPD +TY+ +I      G+M+ A  V  ++   G 
Sbjct: 473 IHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGF 532

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             D   F  L + Y    E +K  ++ ++ + +N
Sbjct: 533 LPDVAVFDSLIQGYSTKGEINKVLELIREMITKN 566



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 219/452 (48%), Gaps = 11/452 (2%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D +  + +  L++MR  G     +  D   +  +IR LC   ++  A+ L  +M + G  
Sbjct: 128 DRLADQAVGLLRSMRSAG-----VRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIE 182

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+V+ ++ L+   CK G  E    V  EMSE    P+   Y   I   C+V +  KA  +
Sbjct: 183 PNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGV 242

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   G+ PN VT+N+L++ +CK+G + +A+  L ++    +     DV+T   L+  
Sbjct: 243 MDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKM---SEKGVAPDVVTYNTLIKG 299

Query: 271 YFKNGDKFQALALWNDMFQ-KNI-QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
                +  +A+ L  +M + KNI + ++V +N +I G C  G +  AF     M + G +
Sbjct: 300 LSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCM 359

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
            +++TYN L+  L +  K+ +A      ++  G+ PD  +Y  +I+G C    + +A + 
Sbjct: 360 VNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDL 419

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L +M ++ + PE   +  ++      G +  A ++ + M       +V  ++ +I    +
Sbjct: 420 LSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACK 478

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +  A  L K ++ +G+ PD  TY+++I      G +  A  +  +M   G  PD+  
Sbjct: 479 AGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAV 538

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           +  LI+G+  +G + +  E+  ++ T  +A+D
Sbjct: 539 FDSLIQGYSTKGEINKVLELIREMITKNIALD 570



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 178/380 (46%), Gaps = 37/380 (9%)

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMA---NNGIRPNRVTHNILVHALCKKGLLGDAV 243
           +  +YN  +T  CR    D+A  L   M+   +   RPN V++ +L+ ALC   L   AV
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 244 KFL--------------------GEVLADDDGKATS------------DVITSTILMDSY 271
             L                    G   A +  KA              +V+  + L+  Y
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K+G       ++ +M +K I+ D+V Y  LI+  C  G    A      M++RG  P+V
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TYN L+NC+CK+G + EA      +S+ GVAPD ++Y T+I+GL    ++ +A   L  
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 392 MLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
           M+    + +P++  +N +I G    G +  AF +R +M   G   N+ T+N LI    R 
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             +  A  L  EM   G+ PD FTY++LI   C +  +  A  L   M  RGI P++  Y
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHY 435

Query: 510 TELIKGHCARGNMKEAEEVF 529
             L+   C +G M+ A  +F
Sbjct: 436 IPLLVAMCEQGMMERARNLF 455



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 164/327 (50%), Gaps = 5/327 (1%)

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           LG+A   L  + +  D  + + V+T+      + + G   +A++L         + + V+
Sbjct: 61  LGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEP---HPACRPNAVS 117

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y VL+   C +     A      M   G   DV+TY TL+  LC   ++D+A    G + 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           ++G+ P+ + Y +++QG C  G      +  + M EK + P+  ++  +ID   + G   
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  + D+M+  G+  NV T+N LI    + GS+ +A  + K+M   G+ PDV TYN LI
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 479 GASCNLGHIHLALQLYDEMLRRG--ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
               ++  +  A+ L +EM+R    + P+++T+  +I+G C  G M++A +V A ++  G
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDI 563
             ++ + + +L     R+ +  KA ++
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMEL 384



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 155/316 (49%), Gaps = 11/316 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV--P 151
           +KE +  LK M + G     +  D   +  +I+ L    ++  A+WL  +M++   +  P
Sbjct: 271 VKEAIGVLKKMSEKG-----VAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKP 325

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           +V+T N ++  LC IG + +A  V   M E     N  TYN  I G  RV+++ KA+ L 
Sbjct: 326 NVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELM 385

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M + G+ P+  T++IL+   CK   +  A   L  +    D     ++     L+ + 
Sbjct: 386 DEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTM---RDRGIEPELFHYIPLLVAM 442

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            + G   +A  L+N+M   N   D+VAY+ +I+G C  GD+ +A      ++  G  PD 
Sbjct: 443 CEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDA 501

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TY+ ++N   K G ++ A+     ++ +G  PD   + ++IQG    G+I K  E +  
Sbjct: 502 VTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIRE 561

Query: 392 MLEKSVVPEPHIWNVI 407
           M+ K++  +  I + +
Sbjct: 562 MITKNIALDSKIISTL 577



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 49/273 (17%)

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           CL +  +L        +L       D +SY T++  LC  G   +A   L +M   S+ P
Sbjct: 51  CLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAM---SLEP 107

Query: 400 EPH-----------------------------------------IWNVIIDGYGRCGDLS 418
            P                                           +  +I G     ++ 
Sbjct: 108 HPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVD 167

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   M   G+  NV  +++L+    + G   D   +  EM   GI PDV  Y  LI
Sbjct: 168 KAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLI 227

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            + C +G    A  + D M+RRG+ P+++TY  LI   C  G++KEA  V  K+   G+A
Sbjct: 228 DSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVA 287

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            D + +  L K    + E D+A      WLL  
Sbjct: 288 PDVVTYNTLIKGLSDVLEMDEA-----MWLLEE 315


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 230/512 (44%), Gaps = 26/512 (5%)

Query: 49  LPCTLNDIMSYVGDQCRS----KTRHWFSNKDSD----NEGNPQAVFNALDLILKENLDR 100
           +PCT   +++ VG   R+    +    F     D        P+   + +D +L+EN+  
Sbjct: 86  VPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMVG 145

Query: 101 -----LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
                   MR  G     +  +   +  ++R LC   ++G A  +  +M +KG  PD +T
Sbjct: 146 AVVLVYDNMRKDG-----VHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVT 200

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +  +V+ LCK+  L++A  V+  M      P  A+YNA +   CR   + +   + S M 
Sbjct: 201 YATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMV 255

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
             G++PN +T+  +V A CK G L  A   L  ++       T +V+T T L+   F +G
Sbjct: 256 GRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITG---CTPNVVTFTALVRGLFDDG 312

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
               AL +W  M  +      V+YN+LI G C  GD+  A +    M + G  P+V TY+
Sbjct: 313 RVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYS 372

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           TL++   K G L  A   +  +S++G  P+ + Y  ++   C      +A+  +  ML +
Sbjct: 373 TLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLE 432

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
           +  P    +N +I     C  +  A  +   M   G   N  T+N LI    R G+  DA
Sbjct: 433 NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDA 492

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             +  EM   GI   + TYN ++   C       A+    +M+ +GI P+  T++ +I  
Sbjct: 493 LHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHA 552

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +C  G ++ A  +   +  +    + + + IL
Sbjct: 553 YCKEGEVRMAAWMLGAMNVVNCHRNILVYTIL 584



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 126/484 (26%), Positives = 200/484 (41%), Gaps = 54/484 (11%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R H A +R L   G +       ++M  +G VP   T   LV  +         D  ++ 
Sbjct: 56  RAHEAAVRRLAAAGDVDGVQLALQEMRLRG-VP--CTEGALVAAVGAFARAGAPDRALKT 112

Query: 179 MSEMRPSPNCAT------YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
                    CA       YN  I    R N +   + ++  M  +G+ PN  T+N+LV A
Sbjct: 113 FYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRA 172

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF-QALALWNDMFQKN 291
           LC+   +G A K L E+     G    DV  +TI+  S     D+  +A  +   M    
Sbjct: 173 LCQNNRVGAARKMLDEM--ARKGCPPDDVTYATIV--SVLCKLDRLDEATEVLAAM---- 224

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
                 +YN ++   C    +   F+    M+ RG  P+VITY T+++  CK G+L  A 
Sbjct: 225 -PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMAC 283

Query: 352 HFYGVLSKTGV-----------------------------------APDQISYKTIIQGL 376
                +  TG                                    AP  +SY  +I+GL
Sbjct: 284 AILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGL 343

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  GD+  A   L SM +    P    ++ +IDG+ + GDL  A SI + M   G   NV
Sbjct: 344 CSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNV 403

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
             +  ++    +      A SL  +MLL+   P+  T+N LI + C+   +  AL ++ E
Sbjct: 404 VVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHE 463

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M R G  P+  TY ELI G    GN  +A  +  ++Q+ G+ +  + +  +     + + 
Sbjct: 464 MRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRM 523

Query: 557 SDKA 560
           S +A
Sbjct: 524 SREA 527



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 151/323 (46%), Gaps = 32/323 (9%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++R L   G++  AL + R M+ +G  P  +++N L+  LC +GDL+ A  ++  M + 
Sbjct: 303 ALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQH 362

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY+  I G+ +  +L  A+ +++ M+ +G +PN V +  +V   CKK +   A
Sbjct: 363 GCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQA 422

Query: 243 VKFLGEVLADD--------------------DGKA------------TSDVITSTILMDS 270
              + ++L ++                     G+A              +  T   L+  
Sbjct: 423 KSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHG 482

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
            F+ G+   AL +  +M    I+  +V YN +++G C       A  +  +M+ +G  P+
Sbjct: 483 LFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPN 542

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
             T++ +++  CK+G++  A+   G ++      + + Y  ++  LC    +V A  +LL
Sbjct: 543 AFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLL 602

Query: 391 SMLEKSVVPEPHIWNVIIDGYGR 413
            ML + + P    WNV++ G  R
Sbjct: 603 KMLYEGIYPNTVTWNVLVRGVFR 625


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 226/520 (43%), Gaps = 74/520 (14%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D R     I  LC       AL + RKM   G VP   T N +V+ L K G +E+A 
Sbjct: 208 IEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEAL 267

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV--- 230
           H+  E+       +       + GYC   E+ KAL +F     +G+ P  VT+ +L+   
Sbjct: 268 HIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGC 327

Query: 231 ---------HALCK------------------KGLLG-----DAVKFLGEVLADDDGKAT 258
                    + LC+                  KGLL      DAV    E +AD      
Sbjct: 328 TEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKE-MAD---SGI 383

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            D  T  IL+    +     +AL LW  M +  ++  IV Y+ L+  +C+NG +  A   
Sbjct: 384 PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKL 443

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           + +M  +GF P+V+TY TL+     +   D+A      + + GV+ +  +Y T+I GLC+
Sbjct: 444 YTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCV 503

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G + +  E L     +  VP    +N II+G+ + G + +AF++   M + G+  N+ T
Sbjct: 504 VGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVT 563

Query: 439 -----------------------------------FNALILAETRGGSIFDAFSLKKEML 463
                                              +N+LI    + G++  A  +   ML
Sbjct: 564 YTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLML 623

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
            DG+ P++  YN  I    NL  +  AL+ Y++M++ GI  D  TYT LI G    GN+ 
Sbjct: 624 KDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVT 683

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            A ++++++   G   DHI F  L     R  + D AR +
Sbjct: 684 FALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKL 723



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 217/451 (48%), Gaps = 6/451 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +IR     G    A  L R+M   G +P     N ++  L      + A  + +EM+
Sbjct: 320 YTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMA 379

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    P+  TYN  I   C+  ++ +AL+L+  M   G++P  VT++ L+   C  G + 
Sbjct: 380 D-SGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMD 438

Query: 241 DAVKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           +AVK   E+     GK  T +V+T T LM  +       +A AL  +M Q  +  +   Y
Sbjct: 439 EAVKLYTEM----PGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTY 494

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N LING C+ G +        +    GF+P  +TYN+++N   K G +  A   Y  +  
Sbjct: 495 NTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCA 554

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ P+ ++Y + I G C       A + L  +  K + P+   +N +I G+ + G++S+
Sbjct: 555 KGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSH 614

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +  LML  G+  N+  +N+ I        + +A    ++M+ +GI  D  TY  LI 
Sbjct: 615 ALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLID 674

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                G++  AL+LY EM+ +G  PD IT+T L  G C  G++ +A ++  ++  L +  
Sbjct: 675 GFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRP 734

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           + + + +L   Y R  +  +A  +H + L R
Sbjct: 735 NVLMYNMLINGYLRNGKLQEAFRLHDEMLER 765



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 179/372 (48%), Gaps = 13/372 (3%)

Query: 115 ETDYRRHVAVIRDL----CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           ET  + ++     L    C+ G +  A+ L  +M  KG  P+V+T+  L+         +
Sbjct: 414 ETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFD 473

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYC---RVNELDKALHLFSTMANNGIRPNRVTHN 227
           KA  ++ EM +   S N  TYN  I G C   RV E+ + L  F T    G  P  +T+N
Sbjct: 474 KAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFET---EGFVPTAMTYN 530

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            +++   K G++G A     ++ A        +++T T  +D Y K      AL + ND+
Sbjct: 531 SIINGFIKAGMMGSAFAVYQQMCAKG---IPPNIVTYTSFIDGYCKTSCCDLALKMLNDV 587

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
             K ++ DI AYN LI GFC  G++S A      MLK G LP++  YN+ +        +
Sbjct: 588 RCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMM 647

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           +EA  FY  + K G+  D  +Y T+I G    G++  A +    M+ K  +P+   +  +
Sbjct: 648 EEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTAL 707

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
             G  R GD+ +A  + D M    +  NV  +N LI    R G + +AF L  EML   I
Sbjct: 708 THGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKI 767

Query: 468 FPDVFTYNLLIG 479
            PD  TY++L+G
Sbjct: 768 MPDDTTYDILVG 779



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 211/466 (45%), Gaps = 17/466 (3%)

Query: 51  CTLNDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAVFNAL--DLILKENLDRLKTMRDTG 108
           CT   +     + CR    H      S NE N   V   L  D + K+ +   K M D+G
Sbjct: 327 CTEEGMPEKAYELCRQMRDHGL--LPSTNEFN--MVIKGLLNDKLWKDAVSLFKEMADSG 382

Query: 109 PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
                   D   +  +I  LC   KI  AL L  KM + G  P ++T++ L+   C  G 
Sbjct: 383 I------PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGC 436

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           +++A  +  EM     +PN  TY   + G+      DKA  L + M  NG+  N  T+N 
Sbjct: 437 MDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNT 496

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDM 287
           L++ LC  G + +    +GE+L   + +      +T   +++ + K G    A A++  M
Sbjct: 497 LINGLCVVGRVCE----VGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
             K I  +IV Y   I+G+C       A      +  +G  PD+  YN+L+   C++G +
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNM 612

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
             A     ++ K G+ P+   Y + I G      + +A  F   M+++ +  +   +  +
Sbjct: 613 SHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTL 672

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           IDG+ + G+++ A  +   M++ G   +  TF AL     R G I DA  L  EM    I
Sbjct: 673 IDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDI 732

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            P+V  YN+LI      G +  A +L+DEML R I PD  TY  L+
Sbjct: 733 RPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 139/295 (47%), Gaps = 1/295 (0%)

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           ++M + FK G    A+ L+++M    I+ D    +V I   C   D + A     +M   
Sbjct: 182 VVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDA 241

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           GF+P   T+N++++ L K G+++EA H    L  TG     +   T++ G C+  ++ KA
Sbjct: 242 GFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKA 301

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            +     L   +VP    + V+I G    G    A+ +   M   G+  +   FN +I  
Sbjct: 302 LDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKG 361

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
                   DA SL KEM   GI PD FTYN+LI   C    I  AL L+++M   G+ P 
Sbjct: 362 LLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPY 420

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           I+TY  L+  +C  G M EA +++ ++   G   + + +  L K +      DKA
Sbjct: 421 IVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKA 475



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 151/333 (45%), Gaps = 4/333 (1%)

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D A+ LF  M  + I P++   ++ + +LCK   L DA + L  +    D        T 
Sbjct: 194 DDAVRLFDEMPASEIEPDQRVCSVAIASLCK---LRDANRALLVLRKMQDAGFVPWDFTF 250

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
             ++D   K G   +AL + +++     +  +V    L++G+CL  ++  A   F + L+
Sbjct: 251 NSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLR 310

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G +P  +TY  L+    ++G  ++A      +   G+ P    +  +I+GL ++  + K
Sbjct: 311 DGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL-LNDKLWK 369

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
               L   +  S +P+   +N++I    +   +  A ++ + M   GV   + T+++L+L
Sbjct: 370 DAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLL 429

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
                G + +A  L  EM   G  P+V TY  L+    N      A  L  EM + G++ 
Sbjct: 430 CYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSC 489

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           +  TY  LI G C  G + E  E+  + +T G 
Sbjct: 490 NDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF 522



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 7/212 (3%)

Query: 101 LKTMRDTGPVRCT-LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYL 159
           LK + D   VRC  L  D   + ++I   C  G +  AL +   M++ G +P++  +N  
Sbjct: 581 LKMLND---VRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSF 637

Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
           +     +  +E+A     +M +     + ATY   I G+ +   +  AL L+S M   G 
Sbjct: 638 ITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGN 697

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            P+ +T   L H LC+ G + DA K L E+   D      +V+   +L++ Y +NG   +
Sbjct: 698 IPDHITFTALTHGLCRNGDIDDARKLLDEMNRLD---IRPNVLMYNMLINGYLRNGKLQE 754

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
           A  L ++M ++ I  D   Y++L+    L  D
Sbjct: 755 AFRLHDEMLERKIMPDDTTYDILVGMKSLGSD 786



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 1/227 (0%)

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +M  +G   D   ++ ++    K+G  D+A   +  +  + + PDQ      I  LC   
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
           D  +A   L  M +   VP    +N ++D   + G +  A  I+D +L+ G   +V    
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            L+        +  A  + +E L DG+ P   TY +LI      G    A +L  +M   
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           G+ P    +  +IKG       K+A  +F ++   G+  D   + IL
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNIL 392


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 224/454 (49%), Gaps = 18/454 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  V+  LC   K+  A+   R    K   P V++ N +++  CK+G ++ A      + 
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    P+  ++N  I G C V  + +AL L S M  +G+ P+ VT+NIL       G++ 
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD-IVAY 299
            A + + ++L   D   + DVIT TIL+    + G+    L L  DM  +  + + I+  
Sbjct: 310 GAWEVIRDML---DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 366

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           +V+++G C  G I  A + F QM   G  PD++ Y+ +++ LCK GK D A   Y  +  
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
             + P+  ++  ++ GLC  G +++AR  L S++      +  ++N++IDGY + G +  
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +  +++  G++ +V TFN+LI    +  +I +A  +   + L G+ P V +Y  L+ 
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE------AEEVFAK-- 531
           A  N G+     +L  EM   GI P  +TY+ + KG C RG   E       E +F K  
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVLRERIFEKCK 605

Query: 532 -----IQTLGLAIDHIPFRILKKRYRRMKESDKA 560
                +++ G+  D I +  + +   R+K    A
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 639



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 200/398 (50%), Gaps = 8/398 (2%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++ +V+ LC+   LE A   +R        P+  ++N+ ++GYC++  +D A   F T+
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK--ATSDVITSTILMDSYF 272
              G+ P+  +HNIL++ LC  G + +A++     LA D  K     D +T  IL   + 
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALE-----LASDMNKHGVEPDSVTYNILAKGFH 303

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF-LPDV 331
             G    A  +  DM  K +  D++ Y +L+ G C  G+I         ML RGF L  +
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           I  + +L+ LCK G++DEA   +  +   G++PD ++Y  +I GLC  G    A      
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 423

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M +K ++P       ++ G  + G L  A S+ D ++S G + ++  +N +I    + G 
Sbjct: 424 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           I +A  L K ++  GI P V T+N LI   C   +I  A ++ D +   G+ P +++YT 
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           L+  +   GN K  +E+  +++  G+   ++ + ++ K
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK 581



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 214/474 (45%), Gaps = 16/474 (3%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++C L      H  +I  LCL G I  AL L   M + G  PD +T+N L      +G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH-NI 228
             A  VIR+M +   SP+  TY   + G C++  +D  L L   M + G   N +   ++
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++  LCK G + +A+    ++ AD     + D++  +I++    K G    AL L+++M 
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADG---LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            K I  +   +  L+ G C  G +  A +    ++  G   D++ YN +++   K G ++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA   + V+ +TG+ P   ++ ++I G C   +I +AR+ L  +    + P    +  ++
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS-----------IFDAFS 457
           D Y  CG+  +   +R  M + G+     T++ +     RG             IF+   
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605

Query: 458 LK-KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
              ++M  +GI PD  TYN +I   C + H+  A    + M  R +     TY  LI   
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           C  G +++A+     +Q   +++    +  L K +    + + A  +  + L R
Sbjct: 666 CVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 719



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 200/435 (45%), Gaps = 21/435 (4%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKG-TVPDVLTHNYL 159
           ++ M D G     L  D   +  ++   C  G I   L L + M+ +G  +  ++  + +
Sbjct: 315 IRDMLDKG-----LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369

Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
           ++ LCK G +++A  +  +M     SP+   Y+  I G C++ + D AL L+  M +  I
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            PN  TH  L+  LC+KG+L +A   L  +++  +   T D++   I++D Y K+G   +
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE---TLDIVLYNIVIDGYAKSGCIEE 486

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           AL L+  + +  I   +  +N LI G+C   +I+ A      +   G  P V++Y TL++
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC---IHGD---IVKAREF----- 388
                G           +   G+ P  ++Y  I +GLC    H +   +++ R F     
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606

Query: 389 -LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L  M  + + P+   +N II    R   LS AF   ++M S  + ++  T+N LI +  
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G I  A S    +    +    F Y  LI A C  G   +A++L+ ++L RG    I 
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726

Query: 508 TYTELIKGHCARGNM 522
            Y+ +I   C R  M
Sbjct: 727 DYSAVINRLCRRHLM 741



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 203/458 (44%), Gaps = 86/458 (18%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           RK    G V D+L   +L + L  + D   + +++++M +   + +  +YN+ +  +   
Sbjct: 118 RKWESTGLVWDMLL--FLSSRLRMVDD---SLYILKKMKDQNLNVSTQSYNSVLYHF--- 169

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            E DK   ++  + +     N  T++ +V  LC++  L DAV FL           TS+ 
Sbjct: 170 RETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFL----------RTSE- 214

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
                                 W     K+I   +V++N +++G+C  G +  A ++FC 
Sbjct: 215 ----------------------W-----KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           +LK G +P V ++N L+N LC  G + EA      ++K GV PD ++Y  + +G  + G 
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN-VFTFN 440
           I  A E +  ML+K + P+   + +++ G  + G++     +   MLS G   N +   +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            ++    + G I +A SL  +M  DG+ PD+  Y+++I   C LG   +AL LYDEM  +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427

Query: 501 GITP-----------------------------------DIITYTELIKGHCARGNMKEA 525
            I P                                   DI+ Y  +I G+   G ++EA
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            E+F  +   G+      F  L   Y + +   +AR I
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 229/493 (46%), Gaps = 43/493 (8%)

Query: 90  LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT 149
           LD +L EN  ++     +   +  +E +   +  +++ LC   ++  A  L  +M  KG 
Sbjct: 153 LDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGC 212

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            PD +++  L++ LCK+G +++A    RE++ M  +P+   YNA I G C+    ++A  
Sbjct: 213 DPDEVSYTTLISSLCKLGKVKEA----RELA-MSFTPSVPVYNALINGVCKEYTFEEAFQ 267

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L   M N GI PN +++  +++AL   G +  ++  L ++ A      + ++ T T L+ 
Sbjct: 268 LLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG---CSPNLHTFTSLIK 324

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
            +F  G   +AL  W+ M ++ +  ++VAYN L++G C    +  A + F QM   G  P
Sbjct: 325 GFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCP 384

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY-------------------- 369
           +V TY+ L++   K G LD AS  +  +   G  P+ ++Y                    
Sbjct: 385 NVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLI 444

Query: 370 ---------------KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
                           T I+GLC  G +  A +    M      P    +N ++D   + 
Sbjct: 445 ENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKD 504

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
                AF +   M   G+  N+ T+N +I      G + +A  L  +M++ G  PD  T 
Sbjct: 505 RRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITV 564

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N++I A C  G +++A+QL D +      PDII YT LI G C    ++EA     ++ +
Sbjct: 565 NIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLS 624

Query: 535 LGLAIDHIPFRIL 547
            G++ +   + +L
Sbjct: 625 EGISPNVATWNVL 637



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 194/465 (41%), Gaps = 43/465 (9%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           ++VI      G    AL    +M      P V  +N++++ L      +  + +   M +
Sbjct: 115 ISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               PN  TYN  +   C+ N +D A  L   M++ G  P+ V++  L+ +LCK G + +
Sbjct: 175 DGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKE 234

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A +             T  V     L++   K     +A  L ++M  K I  ++++Y  
Sbjct: 235 ARELAMSF--------TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTT 286

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +IN     G++  + A   +M  RG  P++ T+ +L+     +G   EA  F+  + + G
Sbjct: 287 IINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V P+ ++Y  ++ GLC    +  A      M      P    ++ +IDGY + GDL  A 
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGAS 406

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + + M++ G   NV  +  ++    R      A+ L + M ++   P+  T+N  I   
Sbjct: 407 EVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466

Query: 482 CNLGHIHLALQLYDE-----------------------------------MLRRGITPDI 506
           C  G +  A++++D+                                   M  RGI  ++
Sbjct: 467 CGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNL 526

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +TY  +I G+C  G + EA E+  K+   G   D I   I+   Y
Sbjct: 527 VTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAY 571



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 189/429 (44%), Gaps = 39/429 (9%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L  +L +L  +++   +  +       + A+I  +C       A  L  +M+ KG  P+V
Sbjct: 222 LISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNV 281

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +++  ++N L   G++E +  V+ +M     SPN  T+ + I G+       +AL  +  
Sbjct: 282 ISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDR 341

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G+ PN V +N L+H LC K  LGDAV    ++   +      +V T + L+D Y K
Sbjct: 342 MIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM---EINGCCPNVRTYSALIDGYAK 398

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAY---------------------------------- 299
            GD   A  +WN M       ++VAY                                  
Sbjct: 399 AGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVT 458

Query: 300 -NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
            N  I G C +G +  A   F QM   G  P+  TYN LL+ L K  +  EA      + 
Sbjct: 459 FNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDME 518

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G+  + ++Y TII G C  G + +A E L  M+ +   P+    N++ID Y + G ++
Sbjct: 519 HRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVN 578

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  + D + +     ++  + +LI        + +A    + ML +GI P+V T+N+L+
Sbjct: 579 IAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638

Query: 479 -GASCNLGH 486
                N+GH
Sbjct: 639 RHLFSNMGH 647



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 176/364 (48%), Gaps = 10/364 (2%)

Query: 207 ALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           AL  F ++AN+   +   +T+ +++  L  +  + D V++L + +  +    + D+  S 
Sbjct: 59  ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREM-DCVQYLLQQMKLEGISCSEDLFISV 117

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           I   SY + G   QAL  +  M    ++  +  YN +++              +  M K 
Sbjct: 118 I--GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKD 175

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  P+V TYN LL  LCK  ++D A      +S  G  PD++SY T+I  LC  G + +A
Sbjct: 176 GMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA 235

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           RE  +S       P   ++N +I+G  +      AF + D M++ G+  NV ++  +I A
Sbjct: 236 RELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
            +  G++  + ++  +M   G  P++ T+  LI      G  H AL  +D M+R G+ P+
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPN 350

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           ++ Y  L+ G C++ ++ +A  VF +++  G   +   +  L   Y +  + D A ++  
Sbjct: 351 VVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEV-W 409

Query: 566 KWLL 569
            W++
Sbjct: 410 NWMI 413



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 5/211 (2%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I+ LC  G++  A+ +  +M   G  P+  T+N L++ L K     +A  ++++M     
Sbjct: 463 IKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
             N  TYN  I GYC    L +AL L   M   G +P+ +T NI++ A CK+G +  A++
Sbjct: 523 ELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQ 582

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            +  + A   GK   D+I  T L+     +    +A+     M  + I  ++  +NVL+ 
Sbjct: 583 LMDRLSA---GKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVR 639

Query: 305 GFCLNGDISSAFAYF--CQMLKRGFLPDVIT 333
               N   S A  +     +++  F+  +IT
Sbjct: 640 HLFSNMGHSGAVQFLDASSIMQPKFVVLIIT 670



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 17/211 (8%)

Query: 47  DNLPCTLNDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAVFNA------LDLILK----- 95
           +N P       +++   C S    W + K  D  GN     N       LD +LK     
Sbjct: 450 ENCPPNTVTFNTFIKGLCGSGRVDW-AIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFG 508

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E    +K M   G     +E +   +  +I   C  G +G AL L  KM+ +GT PD +T
Sbjct: 509 EAFGLVKDMEHRG-----IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAIT 563

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
            N +++  CK G +  A  ++  +S  +  P+   Y + I+G C    +++A+     M 
Sbjct: 564 VNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRML 623

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           + GI PN  T N+LV  L        AV+FL
Sbjct: 624 SEGISPNVATWNVLVRHLFSNMGHSGAVQFL 654


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 223/449 (49%), Gaps = 18/449 (4%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  V+  LC   K+  A+   R    K   P V++ N +++  CK+G ++ A      + 
Sbjct: 232 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 291

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    P+  ++N  I G C V  + +AL L S M  +G+ P+ VT+NIL       G++ 
Sbjct: 292 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 351

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD-IVAY 299
            A + + ++L   D   + DVIT TIL+    + G+    L L  DM  +  + + I+  
Sbjct: 352 GAWEVIRDML---DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 408

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           +V+++G C  G I  A + F QM   G  PD++ Y+ +++ LCK GK D A   Y  +  
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 468

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
             + P+  ++  ++ GLC  G +++AR  L S++      +  ++N++IDGY + G +  
Sbjct: 469 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 528

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +  +++  G++ +V TFN+LI    +  +I +A  +   + L G+ P V +Y  L+ 
Sbjct: 529 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 588

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE------AEEVFAK-- 531
           A  N G+     +L  EM   GI P  +TY+ + KG C RG   E       E +F K  
Sbjct: 589 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVLRERIFEKCK 647

Query: 532 -----IQTLGLAIDHIPFRILKKRYRRMK 555
                +++ G+  D I +  + +   R+K
Sbjct: 648 QGLRDMESEGIPPDQITYNTIIQYLCRVK 676



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 200/398 (50%), Gaps = 8/398 (2%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++ +V+ LC+   LE A   +R        P+  ++N+ ++GYC++  +D A   F T+
Sbjct: 231 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 290

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK--ATSDVITSTILMDSYF 272
              G+ P+  +HNIL++ LC  G + +A++     LA D  K     D +T  IL   + 
Sbjct: 291 LKCGLVPSVYSHNILINGLCLVGSIAEALE-----LASDMNKHGVEPDSVTYNILAKGFH 345

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF-LPDV 331
             G    A  +  DM  K +  D++ Y +L+ G C  G+I         ML RGF L  +
Sbjct: 346 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 405

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           I  + +L+ LCK G++DEA   +  +   G++PD ++Y  +I GLC  G    A      
Sbjct: 406 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 465

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M +K ++P       ++ G  + G L  A S+ D ++S G + ++  +N +I    + G 
Sbjct: 466 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 525

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           I +A  L K ++  GI P V T+N LI   C   +I  A ++ D +   G+ P +++YT 
Sbjct: 526 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 585

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           L+  +   GN K  +E+  +++  G+   ++ + ++ K
Sbjct: 586 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK 623



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 214/474 (45%), Gaps = 16/474 (3%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++C L      H  +I  LCL G I  AL L   M + G  PD +T+N L      +G +
Sbjct: 291 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 350

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH-NI 228
             A  VIR+M +   SP+  TY   + G C++  +D  L L   M + G   N +   ++
Sbjct: 351 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 410

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++  LCK G + +A+    ++ AD     + D++  +I++    K G    AL L+++M 
Sbjct: 411 MLSGLCKTGRIDEALSLFNQMKADG---LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 467

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            K I  +   +  L+ G C  G +  A +    ++  G   D++ YN +++   K G ++
Sbjct: 468 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 527

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA   + V+ +TG+ P   ++ ++I G C   +I +AR+ L  +    + P    +  ++
Sbjct: 528 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 587

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS-----------IFDAFS 457
           D Y  CG+  +   +R  M + G+     T++ +     RG             IF+   
Sbjct: 588 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 647

Query: 458 LK-KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
              ++M  +GI PD  TYN +I   C + H+  A    + M  R +     TY  LI   
Sbjct: 648 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 707

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           C  G +++A+     +Q   +++    +  L K +    + + A  +  + L R
Sbjct: 708 CVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 761



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 210/453 (46%), Gaps = 21/453 (4%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKG-TVPDVLTHNYL 159
           ++ M D G     L  D   +  ++   C  G I   L L + M+ +G  +  ++  + +
Sbjct: 357 IRDMLDKG-----LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 411

Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
           ++ LCK G +++A  +  +M     SP+   Y+  I G C++ + D AL L+  M +  I
Sbjct: 412 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 471

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            PN  TH  L+  LC+KG+L +A   L  +++  +   T D++   I++D Y K+G   +
Sbjct: 472 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE---TLDIVLYNIVIDGYAKSGCIEE 528

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           AL L+  + +  I   +  +N LI G+C   +I+ A      +   G  P V++Y TL++
Sbjct: 529 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 588

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC---IHGD---IVKAREF----- 388
                G           +   G+ P  ++Y  I +GLC    H +   +++ R F     
Sbjct: 589 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 648

Query: 389 -LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L  M  + + P+   +N II    R   LS AF   ++M S  + ++  T+N LI +  
Sbjct: 649 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 708

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G I  A S    +    +    F Y  LI A C  G   +A++L+ ++L RG    I 
Sbjct: 709 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 768

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            Y+ +I   C R  + E++  F  + + G++ D
Sbjct: 769 DYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 203/458 (44%), Gaps = 86/458 (18%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           RK    G V D+L   +L + L  + D   + +++++M +   + +  +YN+ +  +   
Sbjct: 160 RKWESTGLVWDMLL--FLSSRLRMVDD---SLYILKKMKDQNLNVSTQSYNSVLYHF--- 211

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            E DK   ++  + +     N  T++ +V  LC++  L DAV FL           TS+ 
Sbjct: 212 RETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFL----------RTSE- 256

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
                                 W     K+I   +V++N +++G+C  G +  A ++FC 
Sbjct: 257 ----------------------W-----KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 289

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           +LK G +P V ++N L+N LC  G + EA      ++K GV PD ++Y  + +G  + G 
Sbjct: 290 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 349

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN-VFTFN 440
           I  A E +  ML+K + P+   + +++ G  + G++     +   MLS G   N +   +
Sbjct: 350 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 409

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            ++    + G I +A SL  +M  DG+ PD+  Y+++I   C LG   +AL LYDEM  +
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 469

Query: 501 GITP-----------------------------------DIITYTELIKGHCARGNMKEA 525
            I P                                   DI+ Y  +I G+   G ++EA
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 529

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            E+F  +   G+      F  L   Y + +   +AR I
Sbjct: 530 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 567



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 184/424 (43%), Gaps = 30/424 (7%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E L     M+  G     L  D   +  VI  LC  GK   ALWL  +M  K  +P+ 
Sbjct: 421 IDEALSLFNQMKADG-----LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNS 475

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            TH  L+  LC+ G L +A  ++  +     + +   YN  I GY +   +++AL LF  
Sbjct: 476 RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 535

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           +   GI P+  T N L++  CK   + +A K L  +     G A S V++ T LMD+Y  
Sbjct: 536 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL--YGLAPS-VVSYTTLMDAYAN 592

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC-------LNGDISSAFAYFCQ----- 321
            G+      L  +M  + I    V Y+V+  G C        N  +       C+     
Sbjct: 593 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD 652

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M   G  PD ITYNT++  LC+   L  A  F  ++    +     +Y  +I  LC++G 
Sbjct: 653 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 712

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           I KA  F+ S+ E++V      +  +I  +   GD   A  +   +L  G + ++  ++A
Sbjct: 713 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSA 772

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I    R   + ++      ML  GI PD+    ++I +           +L    ++ G
Sbjct: 773 VINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIKSD----------ELLSWTIKWG 822

Query: 502 ITPD 505
           + PD
Sbjct: 823 LLPD 826


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 197/421 (46%), Gaps = 2/421 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK+  AL +   M + G  P++   N  +  L K   LEKA   +  M      P+  T
Sbjct: 244 AGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVT 303

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN+ I GYC +N ++ AL L + + + G  P++V++  ++  LCK+  + + VK L E +
Sbjct: 304 YNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKI-EQVKCLMEKM 362

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             D      D +T   L+    K+G    ALA   +   K    D V Y+ +++ FC  G
Sbjct: 363 VQDSN-LIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKG 421

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A +    M  R   PDV+TY  +++  C+ G++DEA      + K G  P+ +SY 
Sbjct: 422 RMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYT 481

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            ++ GLC  G  ++ARE +    E    P    + V++ G+ R G LS A  +   M+  
Sbjct: 482 ALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEK 541

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G        N LI +  +   + +A    +E L  G   +V  +  +I   C +G +  A
Sbjct: 542 GFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAA 601

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L + ++M      PD +TYT L      +G + EA E+  K+ + GL    + FR +  R
Sbjct: 602 LSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHR 661

Query: 551 Y 551
           Y
Sbjct: 662 Y 662



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 196/421 (46%), Gaps = 10/421 (2%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           L  G K+  AL    +M   G  PD++T+N L+   C +  +E A  +I  +      P+
Sbjct: 276 LVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPD 335

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMA-NNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
             +Y   +   C+  ++++   L   M  ++ + P++VT+N L+H L K G   DA+ FL
Sbjct: 336 KVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFL 395

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            E  A+D G     V  S I+  S+ + G   +A +L  DM+ ++   D+V Y  +++GF
Sbjct: 396 KE--AEDKGFHIDKVGYSAIV-HSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGF 452

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C  G I  A     QM K G  P+ ++Y  LLN LC  GK  EA     V  +    P+ 
Sbjct: 453 CRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNA 512

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           I+Y  ++ G    G + +A +    M+EK   P P   N++I    +   +  A    + 
Sbjct: 513 ITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEE 572

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
            L+ G + NV  F  +I    + G +  A S+ ++M L    PD  TY  L  A    G 
Sbjct: 573 CLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGR 632

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +  A +L  +ML +G+ P  +T+  +I  +C  G + +       +  L   +   PFR 
Sbjct: 633 LDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDM------LNLLDRMVKRKPFRT 686

Query: 547 L 547
           +
Sbjct: 687 I 687



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 210/448 (46%), Gaps = 11/448 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L++ L  L+ M+ TG     ++ D   + ++I+  C   +I  AL L   +  KG  PD 
Sbjct: 282 LEKALRFLERMQVTG-----IKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDK 336

Query: 154 LTHNYLVNELCKIGDLEKADHVIREM-SEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           +++  ++  LCK   +E+   ++ +M  +    P+  TYN  I    +    D AL    
Sbjct: 337 VSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLK 396

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
              + G   ++V ++ +VH+ C+KG + +A   + ++ +        DV+T T ++D + 
Sbjct: 397 EAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRS---CNPDVVTYTAIVDGFC 453

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           + G   +A  +   M++   + + V+Y  L+NG C +G    A        +  + P+ I
Sbjct: 454 RLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAI 513

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TY  +++   ++GKL EA      + + G  P  +    +IQ LC +  +V+A+++L   
Sbjct: 514 TYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEEC 573

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           L K        +  +I G+ + GD+  A S+ + M       +  T+ AL  A  + G +
Sbjct: 574 LNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRL 633

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +A  L  +ML  G+ P   T+  +I   C  G +   L L D M++R   P    Y  +
Sbjct: 634 DEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR--KPFRTIYNHV 691

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAID 540
           I+  C  GN++EAE++  K+      +D
Sbjct: 692 IEKLCDFGNLEEAEKLLGKVLRTASKLD 719



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/454 (22%), Positives = 210/454 (46%), Gaps = 6/454 (1%)

Query: 85  AVFNALDLILKEN-LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRK 143
           + +  +  + KE  ++++K + +       L  D   +  +I  L   G    AL   ++
Sbjct: 338 SYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKE 397

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
              KG   D + ++ +V+  C+ G +++A  ++ +M     +P+  TY A + G+CR+  
Sbjct: 398 AEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGR 457

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D+A  +   M  +G +PN V++  L++ LC  G   +A + +      ++   T + IT
Sbjct: 458 IDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMIN---VSEEHWWTPNAIT 514

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             ++M  + + G   +A  L  +M +K      V  N+LI   C N  +  A  Y  + L
Sbjct: 515 YGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECL 574

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            +G   +V+ + T+++  C+ G ++ A      +  +   PD ++Y  +   L   G + 
Sbjct: 575 NKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLD 634

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A E ++ ML K + P P  +  +I  Y + G + +  ++ D M+       +  +N +I
Sbjct: 635 EAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKPFRTI--YNHVI 692

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                 G++ +A  L  ++L      D  T ++L+ +    G    A ++  +M RR +T
Sbjct: 693 EKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLT 752

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           PD+    ++ K     GN+ EA+++  +    G+
Sbjct: 753 PDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGI 786



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 190/425 (44%), Gaps = 6/425 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT-VPDVLTHNYLVNELCKIGDLEKADHV 175
           D   +  V+  LC   KI     L  KM+Q    +PD +T+N L++ L K G  + A   
Sbjct: 335 DKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAF 394

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           ++E  +     +   Y+A +  +C+   +D+A  L   M +    P+ VT+  +V   C+
Sbjct: 395 LKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCR 454

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G + +A K L ++          + ++ T L++    +G   +A  + N   +     +
Sbjct: 455 LGRIDEAKKMLQQMYKHG---CKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPN 511

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
            + Y V+++GF   G +S A     +M+++GF P  +  N L+  LC+  K+ EA  +  
Sbjct: 512 AITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLE 571

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
                G A + +++ T+I G C  GD+  A   L  M   +  P+   +  + D  G+ G
Sbjct: 572 ECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKG 631

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            L  A  +   MLS G+     TF ++I    + G + D  +L   M+    F  +  YN
Sbjct: 632 RLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKPFRTI--YN 689

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            +I   C+ G++  A +L  ++LR     D  T   L++    +G    A +V  ++   
Sbjct: 690 HVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRR 749

Query: 536 GLAID 540
            L  D
Sbjct: 750 NLTPD 754



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/420 (23%), Positives = 173/420 (41%), Gaps = 4/420 (0%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           L +  L++ L K    + A  V+R M+      +   +   +  Y R  +L  AL + + 
Sbjct: 197 LVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTL 256

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G+ PN    N  ++ L K   L  A++FL  +          D++T   L+  Y  
Sbjct: 257 MQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTG---IKPDIVTYNSLIKGYCD 313

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK-RGFLPDVI 332
                 AL L   +  K    D V+Y  ++   C    I        +M++    +PD +
Sbjct: 314 LNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQV 373

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TYNTL++ L K G  D+A  F       G   D++ Y  I+   C  G + +A+  ++ M
Sbjct: 374 TYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDM 433

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
             +S  P+   +  I+DG+ R G +  A  +   M   G   N  ++ AL+      G  
Sbjct: 434 YSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKS 493

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +A  +          P+  TY +++      G +  A  L  EM+ +G  P  +    L
Sbjct: 494 LEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLL 553

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           I+  C    + EA++   +    G AI+ + F  +   + ++ + + A  + +   L NK
Sbjct: 554 IQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNK 613



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 67/144 (46%)

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
           P ++  ++D   +      A  +  LM   G+  +   F  ++++ +R G + +A  +  
Sbjct: 196 PLVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLT 255

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            M   G+ P++   N  I        +  AL+  + M   GI PDI+TY  LIKG+C   
Sbjct: 256 LMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLN 315

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPF 544
            +++A E+ A + + G   D + +
Sbjct: 316 RIEDALELIAGLPSKGCPPDKVSY 339


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 193/407 (47%), Gaps = 6/407 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A +R L     +  A  L  +   +G  PDV     L+  LC+ G    A  V+R     
Sbjct: 48  ARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERS 107

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             + +   YN  + GYCR  +LD A  L ++M    + P+  T+  ++  LC +G +G+A
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEA 164

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  L ++L          V+T T+L+++  K+    QA+ + ++M  K    +IV YNV+
Sbjct: 165 LSLLDDMLHRG---CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 221

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING C  G +  A  +  ++   GF PD ++Y T+L  LC   + ++    +  + +   
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+++++  +++  C  G + +A + L  M          + N++I+   + G + +AF 
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQ 341

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
             + M S+G S +  ++  ++    R     DA  L KEM+     P+  T+N  I   C
Sbjct: 342 FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 401

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
             G I  A  L ++M   G   +I+TY  L+ G C +G +  A E+F
Sbjct: 402 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 213/459 (46%), Gaps = 9/459 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +IR LC  G++G AL L   M+ +G  P V+T+  L+  +CK     +A  V+
Sbjct: 144 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVL 203

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM     +PN  TYN  I G CR   +D A    + +++ G +P+ V++  ++  LC  
Sbjct: 204 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 263

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
               D  +   E++   +     + +T  +L+  + + G   +A+ +   M       + 
Sbjct: 264 KRWEDVEELFAEMM---EKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 320

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
              N++IN  C  G +  AF +   M   G  PD I+Y T+L  LC+  + ++A      
Sbjct: 321 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 380

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + +    P+++++ T I  LC  G I +A   +  M E         +N +++G+   G 
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           + +A    +L  S     N  T+  L+        +  A  L  EML     P+V T+N+
Sbjct: 441 VDSAL---ELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 497

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L+   C  G +  A++L ++M+  G TP++ITY  L+ G     N +EA E+   + + G
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNG 557

Query: 537 LAIDHIPFRIL---KKRYRRMKESDKARDIHQKWLLRNK 572
           ++ D + +  +     R  R++E+ K   I Q   +R K
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPK 596



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 201/422 (47%), Gaps = 8/422 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  +C  G++  A     ++   G  PD +++  ++  LC     E  + +  EM E  
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T++  +  +CR   +++A+ +   M+ +G   N    NI+++ +CK+G + DA 
Sbjct: 281 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 340

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +FL  +        + D I+ T ++    +      A  L  +M +KN   + V +N  I
Sbjct: 341 QFLNNM---GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFI 397

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH-FYGVLSKTGV 362
              C  G I  A     QM + G   +++TYN L+N  C QG++D A   FY +  K   
Sbjct: 398 CILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK--- 454

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ I+Y T++ GLC    +  A E L  ML+K   P    +NV++  + + G +  A  
Sbjct: 455 -PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 513

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M+  G + N+ T+N L+   T   +  +A  L   ++ +G+ PD+ TY+ +IG   
Sbjct: 514 LVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 573

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               +  A++++  +   G+ P  + Y +++   C R N   A + FA + + G   + +
Sbjct: 574 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 633

Query: 543 PF 544
            +
Sbjct: 634 TY 635



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 198/424 (46%), Gaps = 6/424 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            + D   +  V++ LC   +      L  +M++K  +P+ +T + LV   C+ G +E+A 
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 305

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V+ +MS    + N    N  I   C+   +D A    + M + G  P+ +++  ++  L
Sbjct: 306 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C+     DA + L E++  +      + +T    +    + G   QA  L   M +   +
Sbjct: 366 CRAERWEDAKELLKEMVRKN---CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCE 422

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +IV YN L+NGFC+ G + SA   F  M  +   P+ ITY TLL  LC   +LD A+  
Sbjct: 423 VNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAEL 479

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + +   AP+ +++  ++   C  G + +A E +  M+E    P    +N ++DG   
Sbjct: 480 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITN 539

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             +   A  +   ++S GVS ++ T++++I   +R   + +A  +   +   G+ P    
Sbjct: 540 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVI 599

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN ++ A C   +   A+  +  M+  G  P+ +TY  LI+G      +KE  ++  ++ 
Sbjct: 600 YNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELC 659

Query: 534 TLGL 537
           + G+
Sbjct: 660 SRGV 663



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 128/271 (47%), Gaps = 6/271 (2%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  G I  A  L  +M + G   +++T+N LVN  C  G   + D  +     M   PN
Sbjct: 400 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG---RVDSALELFYSMPCKPN 456

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY   +TG C    LD A  L + M      PN VT N+LV   C+KGL+ +A++ + 
Sbjct: 457 TITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVE 516

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           +++   +   T ++IT   L+D    + +  +AL L + +    +  DIV Y+ +I    
Sbjct: 517 QMM---EHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 573

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
               +  A   F  +   G  P  + YN +L  LCK+   D A  F+  +   G  P+++
Sbjct: 574 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 633

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           +Y T+I+GL     + + R+ L  +  + V+
Sbjct: 634 TYITLIEGLANEDFLKETRDLLRELCSRGVL 664



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 3/237 (1%)

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N  L  L  +  L EA+      +  G APD      +I+ LC  G    A   L +   
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
                +   +N ++ GY R G L  A   R L+ S  V+ + +T+  +I      G + +
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAA---RRLIASMPVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A SL  +ML  G  P V TY +L+ A C       A+++ DEM  +G TP+I+TY  +I 
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           G C  G + +A E   ++ + G   D + +  + K     K  +   ++  + + +N
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 211/427 (49%), Gaps = 3/427 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  VI  LC    +  A  + ++MI KG  P+++T+  L++    IG  ++   +++EMS
Sbjct: 242 YTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMS 301

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+C TY   +   C+  +  +A  LF +M   GI+P+   + I++H    KG L 
Sbjct: 302 AHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALS 361

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +   FL   L   +G + +  I + I+  ++ K     +A+ ++N M Q+ +  ++V Y 
Sbjct: 362 EMHSFLD--LMVGNGISPNHYIFN-IVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYA 418

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+  C  G +  A   F QM+  G  P+++ + +L+  LC   K ++A   +  +   
Sbjct: 419 TLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQ 478

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+ + + TI+  LC  G ++KA+  +  M      P+   +N +I G+   G    A
Sbjct: 479 GIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEA 538

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + D+MLS G+  N  T+N L+    R G I DA+S+ +EML +GI P V TYN ++  
Sbjct: 539 SKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHG 598

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
                    A +LY  M+  G    I TY  ++ G      + EA ++F  + +  L +D
Sbjct: 599 LFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVD 658

Query: 541 HIPFRIL 547
            I F I+
Sbjct: 659 IITFNIM 665



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 214/449 (47%), Gaps = 7/449 (1%)

Query: 124 VIRDLCLGGKIGTALW-LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++ LC   ++G A+  L R+M + G  P+V+++N L+   C     E+A  ++  M++ 
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195

Query: 183 RP---SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
           +     PN  +YN  I G+    ++DKA +LF  M + GI PN VT+ I++  LCK  ++
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
             A     +++   D     +++T T L+  Y   G   + + +  +M    ++ D   Y
Sbjct: 256 DRAEGVFQQMI---DKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTY 312

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
            +L++  C  G  + A   F  M+++G  PDV  Y  +L+    +G L E   F  ++  
Sbjct: 313 GLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVG 372

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G++P+   +  +         I +A +    M ++ + P    +  +ID   + G + +
Sbjct: 373 NGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDD 432

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A    + M++ GV+ N+  F +L+           A  L  EM+  GI P+V  +N ++ 
Sbjct: 433 AELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMC 492

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C  G +  A +L D M R G  PDII+Y  LI+GHC  G   EA ++   + ++GL  
Sbjct: 493 NLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKP 552

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +   +  L   Y R    D A  + Q+ L
Sbjct: 553 NECTYNTLLHGYCRDGRIDDAYSVFQEML 581



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 210/442 (47%), Gaps = 5/442 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L+ L  M D G VR +   +   +  VI      G++  A  L   M  +G  P+V+
Sbjct: 183 EEALELLHMMAD-GQVR-SCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVV 240

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  +++ LCK   +++A+ V ++M +    PN  TY   I GY  + +  + + +   M
Sbjct: 241 TYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEM 300

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
           + +G+ P+  T+ +L+  LCKKG   +A K    ++         DV    I++  Y   
Sbjct: 301 SAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKG---IKPDVSIYGIILHGYATK 357

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +  +  + M    I  +   +N++   F     I  A   F +M ++G  P+V+ Y
Sbjct: 358 GALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNY 417

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
            TL++ LCK G++D+A   +  +   GVAP+ + + +++ GLC      KA E    M+ 
Sbjct: 418 ATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVN 477

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           + + P    +N I+      G +  A  + DLM   G   ++ ++NALI      G   +
Sbjct: 478 QGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDE 537

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L   ML  G+ P+  TYN L+   C  G I  A  ++ EML  GITP ++TY  ++ 
Sbjct: 538 ASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILH 597

Query: 515 GHCARGNMKEAEEVFAKIQTLG 536
           G        EA+E++  + T G
Sbjct: 598 GLFKTRRFSEAKELYLNMITSG 619



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 194/392 (49%), Gaps = 4/392 (1%)

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR-PSPNCATYNAFITGYCRVNELDKA 207
             PDV T++ LV   C++G LE        + +      +    N  + G C    + +A
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 208 LH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITST 265
           +  L   M+  G  PN V++N L+   C +    +A++ L  ++AD   ++   ++++  
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELL-HMMADGQVRSCPPNLVSYN 208

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            +++ +F  G   +A  L+ DM  + I  ++V Y ++I+G C    +  A   F QM+ +
Sbjct: 209 TVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDK 268

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  P+++TY  L++     G+  E       +S  G+ PD  +Y  ++  LC  G   +A
Sbjct: 269 GVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEA 328

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           R+   SM+ K + P+  I+ +I+ GY   G LS   S  DLM+  G+S N + FN +  A
Sbjct: 329 RKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCA 388

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             +   I +A  +  +M   G+ P+V  Y  LI A C LG +  A   +++M+  G+ P+
Sbjct: 389 FAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPN 448

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I+ +T L+ G C     ++A E+F ++   G+
Sbjct: 449 IVVFTSLVYGLCTIDKWEKAGELFFEMVNQGI 480



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 201/422 (47%), Gaps = 3/422 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+++++N ++N     G ++KA ++  +M++    PN  TY   I G C+   +D+A  +
Sbjct: 202 PNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGV 261

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M + G+RPN VT+  L+H     G   + V+ L E+ A        D  T  +L+D 
Sbjct: 262 FQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHG---LEPDCFTYGLLLDY 318

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K G   +A  L++ M +K I+ D+  Y ++++G+   G +S   ++   M+  G  P+
Sbjct: 319 LCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPN 378

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
              +N +     K+  + EA   +  + + G++P+ ++Y T+I  LC  G +  A     
Sbjct: 379 HYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFN 438

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M+ + V P   ++  ++ G         A  +   M++ G+  NV  FN ++      G
Sbjct: 439 QMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEG 498

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +  A  L   M   G  PD+ +YN LI   C +G    A +L D ML  G+ P+  TY 
Sbjct: 499 RVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYN 558

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            L+ G+C  G + +A  VF ++ + G+    + +  +     + +   +A++++   +  
Sbjct: 559 TLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITS 618

Query: 571 NK 572
            K
Sbjct: 619 GK 620



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 149/290 (51%), Gaps = 3/290 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++ +LC  G++  A  L   M + GT PD++++N L+   C +G  ++A  ++  M  + 
Sbjct: 490 IMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVG 549

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYN  + GYCR   +D A  +F  M +NGI P  VT+N ++H L K     +A 
Sbjct: 550 LKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAK 609

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +    ++    GK  S + T  I+++   KN    +AL ++  +  K++Q DI+ +N++I
Sbjct: 610 ELYLNMITS--GKQWS-IYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMI 666

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
                +G    A   F  +   G +PDV TY  +   L ++G L+E    +  + K+G A
Sbjct: 667 GALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCA 726

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           P+ +    +++ L + GDI +A  +L  + EK+   E    +++I  + R
Sbjct: 727 PNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSR 776



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 148/301 (49%), Gaps = 9/301 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  LC   K   A  L  +M+ +G  P+V+  N ++  LC  G + KA  +I  M  +
Sbjct: 454 SLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERV 513

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  +YNA I G+C V + D+A  L   M + G++PN  T+N L+H  C+ G + DA
Sbjct: 514 GTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDA 573

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+L++     T  V+T   ++   FK     +A  L+ +M     Q  I  YN++
Sbjct: 574 YSVFQEMLSNG---ITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNII 630

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +NG   N  +  A   F  +  +    D+IT+N ++  L K G+ ++A + +  +S  G+
Sbjct: 631 LNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGL 690

Query: 363 APDQISYKTIIQGLCIHGDIVKAREF--LLSMLEKS-VVPEPHIWNVIIDGYGRCGDLSN 419
            PD  +Y+ I + L   G +    EF  + S +EKS   P   + N ++      GD+S 
Sbjct: 691 VPDVTTYRLIAENLIEEGSL---EEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISR 747

Query: 420 A 420
           A
Sbjct: 748 A 748



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 169/395 (42%), Gaps = 13/395 (3%)

Query: 185 SPNCATYNAFITGYCRVNEL--DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD- 241
           S  C      I    R   L  D AL LF    ++    + +  N L+ A+      G  
Sbjct: 10  SDRCLELERIIGARARAGSLSVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSS 69

Query: 242 -----AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN-IQTD 295
                 V     ++ D   K   DV T +IL+  + + G      A +  + +      D
Sbjct: 70  STSELVVSCFNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVND 129

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQ-MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           +V  N L+ G C    +  A     + M + G  P+V++YNTLL   C + + +EA    
Sbjct: 130 VVVVNRLLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELL 189

Query: 355 GVLSKTGV---APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
            +++   V    P+ +SY T+I G    G + KA    L M ++ + P    + ++IDG 
Sbjct: 190 HMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGL 249

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +   +  A  +   M+  GV  N+ T+  LI      G   +   + KEM   G+ PD 
Sbjct: 250 CKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDC 309

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
           FTY LL+   C  G    A +L+D M+R+GI PD+  Y  ++ G+  +G + E       
Sbjct: 310 FTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDL 369

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +   G++ +H  F I+   + +     +A DI  K
Sbjct: 370 MVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNK 404


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 199/427 (46%), Gaps = 3/427 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE        +I  LC+ G +  A+ L   M +     DV T+  L+N LCK GD   A 
Sbjct: 143 LEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAV 202

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             +R+M E    PN   Y+  + G C+   + +AL+L S M   G+RPN VT+  L+  L
Sbjct: 203 GWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGL 262

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C  G   +A   L E++         D+    IL+D++ K G   QA ++   M      
Sbjct: 263 CNFGRWKEAGSLLDEMMKMG---MRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEG 319

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+  YN LI+ +CL   ++ A   F  M+ RG LPD++ + +L++  CK   +++A H 
Sbjct: 320 PDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHL 379

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +SK G  PD  ++ T+I G C  G  + A+E  L+M +   VP      VI+DG  +
Sbjct: 380 LEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCK 439

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              LS A S+   M    +  N+  ++ L+      G +  A+ L   +   G+  +V+ 
Sbjct: 440 ENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYI 499

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y ++I   C  G +  A  L   M   G  P+  TY   ++G   +  +  + +    ++
Sbjct: 500 YTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMR 559

Query: 534 TLGLAID 540
             G ++D
Sbjct: 560 DKGFSVD 566



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 191/381 (50%), Gaps = 13/381 (3%)

Query: 163 LCKIGDLEKADHVI---REMSEMRPSPNCATYNAFITGYCRVNELDKAL----HLFSTMA 215
           LC  G L+  D  +   + M+ M+P P+   +   +    R+     A+    H+FS++ 
Sbjct: 48  LCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSL- 106

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
             GI  + +T NI+++ LC+  L+      LG +           V+T T L++     G
Sbjct: 107 --GIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLG---LEPTVMTLTTLINGLCVQG 161

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
           +  QA+ L + M +     D+  Y VLING C  GD  +A  +  +M +R + P+V+ Y+
Sbjct: 162 NVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYS 221

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           T+++ LCK G + EA +    ++  GV P+ ++Y  +IQGLC  G   +A   L  M++ 
Sbjct: 222 TIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKM 281

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
            + P+  + N+++D + + G +  A S+   M+  G   +VFT+N+LI        + +A
Sbjct: 282 GMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEA 341

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             +   M+  G  PD+  +  LI   C   +I+ A+ L +EM + G  PD+ T+T LI G
Sbjct: 342 MRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGG 401

Query: 516 HCARGNMKEAEEVFAKIQTLG 536
            C  G    A+E+F  +   G
Sbjct: 402 FCQAGRPLAAKELFLNMHKYG 422



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 200/429 (46%), Gaps = 4/429 (0%)

Query: 136 TALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
           TA+ L + M    G   D +T N ++N LC++  +     V+  M ++   P   T    
Sbjct: 94  TAISLVKHMFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTL 153

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           I G C    + +A+ L   M       +  T+ +L++ LCK G   D +  +G +   ++
Sbjct: 154 INGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTG---DTLAAVGWLRKMEE 210

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
                +V+  + +MD   K+G   +AL L ++M  K ++ ++V Y  LI G C  G    
Sbjct: 211 RNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKE 270

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A +   +M+K G  PD+   N L++  CK+GK+ +A    G +  TG  PD  +Y ++I 
Sbjct: 271 AGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIH 330

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
             C+   + +A      M+ +  +P+  ++  +I G+ +  +++ A  + + M   G   
Sbjct: 331 IYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVP 390

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +V T+  LI    + G    A  L   M   G  P++ T  +++   C    +  A+ L 
Sbjct: 391 DVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLA 450

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
             M +  +  +I+ Y+ L+ G C+ G +  A E+F+ +   GL I+   + I+ K   + 
Sbjct: 451 KAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQ 510

Query: 555 KESDKARDI 563
              DKA D+
Sbjct: 511 GSLDKAEDL 519



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 129/309 (41%), Gaps = 36/309 (11%)

Query: 265 TILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           T+L+ +  +      A++L   MF    I+ D +  N++IN  C    ++  F+    M 
Sbjct: 80  TLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMF 139

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           K G  P V+T  TL+N LC QG + +A      + K     D  +Y  +I GLC  GD +
Sbjct: 140 KLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTL 199

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A  +L  M E++  P   +++ I+DG   C D                           
Sbjct: 200 AAVGWLRKMEERNWKPNVVVYSTIMDGL--CKD--------------------------- 230

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                 G + +A +L  EM   G+ P++ TY  LI   CN G    A  L DEM++ G+ 
Sbjct: 231 ------GLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMR 284

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PD+     L+   C  G + +A+ V   +   G   D   +  L   Y    + ++A  +
Sbjct: 285 PDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRV 344

Query: 564 HQKWLLRNK 572
               + R +
Sbjct: 345 FHLMVSRGR 353


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 193/407 (47%), Gaps = 6/407 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A +R L     +  A  L  +   +G  PDV     L+  LC+ G    A  V+R     
Sbjct: 48  ARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERS 107

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             + +   YN  + GYCR  +LD A  L ++M    + P+  T+  ++  LC +G +G+A
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEA 164

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  L ++L          V+T T+L+++  K+    QA+ + ++M  K    +IV YNV+
Sbjct: 165 LSLLDDMLHRG---CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 221

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING C  G +  A  +  ++   GF PD ++Y T+L  LC   + ++    +  + +   
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+++++  +++  C  G + +A + L  M          + N++I+   + G + +AF 
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQ 341

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
             + M S+G S +  ++  ++    R     DA  L KEM+     P+  T+N  I   C
Sbjct: 342 FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 401

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
             G I  A  L ++M   G   +I+TY  L+ G C +G +  A E+F
Sbjct: 402 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 213/459 (46%), Gaps = 9/459 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +IR LC  G++G AL L   M+ +G  P V+T+  L+  +CK     +A  V+
Sbjct: 144 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVL 203

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM     +PN  TYN  I G CR   +D A    + +++ G +P+ V++  ++  LC  
Sbjct: 204 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 263

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
               D  +   E++   +     + +T  +L+  + + G   +A+ +   M       + 
Sbjct: 264 KRWEDVEELFAEMM---EKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 320

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
              N++IN  C  G +  AF +   M   G  PD I+Y T+L  LC+  + ++A      
Sbjct: 321 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 380

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + +    P+++++ T I  LC  G I +A   +  M E         +N +++G+   G 
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           + +A    +L  S     N  T+  L+        +  A  L  EML     P+V T+N+
Sbjct: 441 VDSAL---ELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 497

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L+   C  G +  A++L ++M+  G TP++ITY  L+ G     N +EA E+   + + G
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 557

Query: 537 LAIDHIPFRIL---KKRYRRMKESDKARDIHQKWLLRNK 572
           ++ D + +  +     R  R++E+ K   I Q   +R K
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPK 596



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 202/422 (47%), Gaps = 8/422 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  +C  G++  A     ++   G  PD +++  ++  LC     E  + +  EM E  
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T++  +  +CR   +++A+ +   M+ +G   N    NI+++ +CK+G + DA 
Sbjct: 281 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 340

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +FL  +        + D I+ T ++    +      A  L  +M +KN   + V +N  I
Sbjct: 341 QFLNNM---GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFI 397

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH-FYGVLSKTGV 362
              C  G I  A     QM + G   +++TYN L+N  C QG++D A   FY +  K   
Sbjct: 398 CILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK--- 454

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ I+Y T++ GLC    +  A E L  ML+K   P    +NV++  + + G +  A  
Sbjct: 455 -PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 513

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M+  G + N+ T+N L+   T+  +  +A  L   ++ +G+ PD+ TY+ +IG   
Sbjct: 514 LVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 573

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               +  A++++  +   G+ P  + Y +++   C R N   A + FA + + G   + +
Sbjct: 574 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 633

Query: 543 PF 544
            +
Sbjct: 634 TY 635



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 199/424 (46%), Gaps = 6/424 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            + D   +  V++ LC   +      L  +M++K  +P+ +T + LV   C+ G +E+A 
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 305

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V+ +MS    + N    N  I   C+   +D A    + M + G  P+ +++  ++  L
Sbjct: 306 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 365

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C+     DA + L E++  +      + +T    +    + G   QA  L   M +   +
Sbjct: 366 CRAERWEDAKELLKEMVRKN---CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCE 422

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +IV YN L+NGFC+ G + SA   F  M  +   P+ ITY TLL  LC   +LD A+  
Sbjct: 423 VNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAEL 479

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + +   AP+ +++  ++   C  G + +A E +  M+E    P    +N ++DG  +
Sbjct: 480 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITK 539

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             +   A  +   ++S GVS ++ T++++I   +R   + +A  +   +   G+ P    
Sbjct: 540 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVI 599

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN ++ A C   +   A+  +  M+  G  P+ +TY  LI+G      +KE  ++  ++ 
Sbjct: 600 YNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELC 659

Query: 534 TLGL 537
           + G+
Sbjct: 660 SRGV 663



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 129/271 (47%), Gaps = 6/271 (2%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  G I  A  L  +M + G   +++T+N LVN  C  G   + D  +     M   PN
Sbjct: 400 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG---RVDSALELFYSMPCKPN 456

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY   +TG C    LD A  L + M      PN VT N+LV   C+KGL+ +A++ + 
Sbjct: 457 TITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVE 516

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           +++   +   T ++IT   L+D   K+ +  +AL L + +    +  DIV Y+ +I    
Sbjct: 517 QMM---EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 573

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
               +  A   F  +   G  P  + YN +L  LCK+   D A  F+  +   G  P+++
Sbjct: 574 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 633

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           +Y T+I+GL     + + R+ L  +  + V+
Sbjct: 634 TYITLIEGLANEDFLKETRDLLRELCSRGVL 664



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 3/237 (1%)

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N  L  L  +  L EA+      +  G APD      +I+ LC  G    A   L +   
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
                +   +N ++ GY R G L  A   R L+ S  V+ + +T+  +I      G + +
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAA---RRLIASMPVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A SL  +ML  G  P V TY +L+ A C       A+++ DEM  +G TP+I+TY  +I 
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           G C  G + +A E   ++ + G   D + +  + K     K  +   ++  + + +N
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 227/481 (47%), Gaps = 37/481 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++ +L   G+  +A+ +  +M +   VPDV T   +VN  CK G +E+A   +REM ++
Sbjct: 36  SLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKL 95

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N  +YN+ + GY  + +++ A  +   M+  G+  N+VT  +L+   CK+  + +A
Sbjct: 96  GFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEA 155

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K L E+  +D      D      L+D Y K G    A+ + ++M +  ++ ++   N L
Sbjct: 156 EKVLREMEKEDG--VVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSL 213

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING+C NG +         M K    PD  +Y TL++  C+ G   +A +    + + G+
Sbjct: 214 INGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGI 273

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  ++Y T+++GLC  GD   A      ML++ V P    +  ++DG  + GD S A +
Sbjct: 274 EPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALT 333

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D +L+ G++ +++ FN +I    + G +  A    K M   G  PD  TY  L    C
Sbjct: 334 LWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYC 393

Query: 483 NLGHIHLA---------------LQLYD--------------------EMLRRGITPDII 507
            +G++  A               +++Y+                    EM  RG++P+++
Sbjct: 394 KVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVV 453

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           TY  LI G C +G + +A   + ++   G A + I    +     R+   D+A  + QK 
Sbjct: 454 TYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM 513

Query: 568 L 568
           +
Sbjct: 514 V 514



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 225/524 (42%), Gaps = 75/524 (14%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
            D   + A+I   C  GK+G A+ +R +M++ G   ++   N L+N  CK G + + + +
Sbjct: 170 VDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERL 229

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           +  M ++   P+  +Y   + GYCR     KA ++   M   GI P  VT+N L+  LC+
Sbjct: 230 LMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCR 289

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G   DA++    +L       T + +    L+D  FK GD  +AL LW+D+  + I   
Sbjct: 290 FGDYKDALRLWHLMLQRG---VTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKS 346

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA----- 350
           I A+N +ING C  G++  A   F +M + G  PD ITY TL +  CK G ++EA     
Sbjct: 347 IYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKE 406

Query: 351 ---------------SHFYGVLSKT---------------GVAPDQISYKTIIQGLCIHG 380
                          S   G+ +                 G++P+ ++Y  +I G C  G
Sbjct: 407 KMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQG 466

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG------------------------- 415
            + KA      M+ K   P   I + I+    R G                         
Sbjct: 467 RLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLE 526

Query: 416 DLSNA-------FSIRDLM----LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           D  NA       + I D +    + F + +NV  +N  +    + G + DA      +  
Sbjct: 527 DFQNADIRKLDCWKIADTLDESAIKFSLPNNV-VYNIAMAGLCKSGKVNDARRFFLGLSH 585

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
               PD FTY  LI      G+++ A  L DEM+ +G+ P+I TY  L+ G C  G +  
Sbjct: 586 GSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDR 645

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           A  +F K+   GL  + + + IL   Y +     +A D+  K L
Sbjct: 646 ARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKML 689



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 196/411 (47%), Gaps = 4/411 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS-EMRPSPNCAT 190
           G I  A  + + M +KG + + +T   L+   CK   +E+A+ V+REM  E     +   
Sbjct: 115 GDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYA 174

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y A I GYC+V ++  A+ +   M   G++ N    N L++  CK G + +  + L  + 
Sbjct: 175 YGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMR 234

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             D      D  +   L+D Y ++G   +A  + + M +K I+  +V YN L+ G C  G
Sbjct: 235 KLD---LKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFG 291

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           D   A   +  ML+RG  P+ + Y TLL+ L K G    A   +  +   G+     ++ 
Sbjct: 292 DYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFN 351

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T+I GLC  G++  A+E    M E    P+   +  + DGY + G++  AF I++ M   
Sbjct: 352 TMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKE 411

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
            +  ++  +N+LI+       I     L  EM   G+ P+V TY  LI   C+ G +  A
Sbjct: 412 EIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKA 471

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
              Y EM+ +G  P++I  ++++      G + EA  +  K+    L +DH
Sbjct: 472 FSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDH 522



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 186/395 (47%), Gaps = 4/395 (1%)

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           G ++ A HV   M +    P+  + N+ ++   +  E   A+ ++  M    I P+  T 
Sbjct: 10  GMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTC 69

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
            I+V+A CK G +  AV+F+ E+   +      + ++   L+D Y   GD   A  +   
Sbjct: 70  AIMVNAYCKAGKVERAVEFVREM---EKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKF 126

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQG 345
           M +K +  + V   +LI G+C    +  A     +M K  G + D   Y  L++  CK G
Sbjct: 127 MSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVG 186

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           K+ +A      + K G+  +     ++I G C +G + +    L+ M +  + P+ + + 
Sbjct: 187 KMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYC 246

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            ++DGY R G  S AF++ D ML  G+   V T+N L+    R G   DA  L   ML  
Sbjct: 247 TLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQR 306

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G+ P+   Y  L+     +G    AL L+D++L RGI   I  +  +I G C  G M  A
Sbjct: 307 GVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGA 366

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           +E F +++ LG   D I +R L   Y ++   ++A
Sbjct: 367 KETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEA 401



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 201/410 (49%), Gaps = 13/410 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++  A    ++M + G  PD +T+  L +  CK+G++E+A  +  +M +  
Sbjct: 353 MINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEE 412

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   YN+ I G     ++ K + L + M   G+ PN VT+  L+   C +G L  A 
Sbjct: 413 IFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAF 472

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E++    G A + +I S I+  S ++ G   +A    N + QK +  D+V  +  +
Sbjct: 473 SAYFEMIGK--GFAPNVIICSKIV-SSLYRLGRIDEA----NMLLQKMVDFDLVLDHRCL 525

Query: 304 NGFCLNGDISSAFAY-----FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
             F  N DI     +       +   +  LP+ + YN  +  LCK GK+++A  F+  LS
Sbjct: 526 EDF-QNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLS 584

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
                PD  +Y T+I G    G + +A      M+ K +VP    +N +++G  + G L 
Sbjct: 585 HGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLD 644

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  + D +   G+  NV T+N LI    + GS  +A  L+ +ML +GI P + TY+ LI
Sbjct: 645 RARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLI 704

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
              C    +  A++L +EM    +   I T+++L++G    G++K+  ++
Sbjct: 705 NGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKL 754



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 154/305 (50%), Gaps = 1/305 (0%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+ +  K G+ + A+ +++ M + +I  D+    +++N +C  G +  A  +  +M K G
Sbjct: 37  LLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLG 96

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           F  + ++YN+L++     G ++ A      +S+ GV  ++++   +I+G C    + +A 
Sbjct: 97  FELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAE 156

Query: 387 EFLLSM-LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           + L  M  E  VV + + +  +IDGY + G + +A  +RD ML  G+  N+F  N+LI  
Sbjct: 157 KVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLING 216

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G + +   L   M    + PD ++Y  L+   C  G    A  + D+MLR+GI P 
Sbjct: 217 YCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPT 276

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           ++TY  L+KG C  G+ K+A  ++  +   G+  + + +  L     +M +  +A  +  
Sbjct: 277 VVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWD 336

Query: 566 KWLLR 570
             L R
Sbjct: 337 DILAR 341



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 169/342 (49%), Gaps = 10/342 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  G++  A     +MI KG  P+V+  + +V+ L ++G +++A+ ++++M + 
Sbjct: 457 ALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDF 516

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR---PNRVTHNILVHALCKKGLL 239
               +      F     R  +LD    +  T+  + I+   PN V +NI +  LCK G +
Sbjct: 517 DLVLDHRCLEDFQNADIR--KLD-CWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKV 573

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            DA +F    L    G  T D  T   L+  +   G   +A  L ++M  K +  +I  Y
Sbjct: 574 NDARRFF---LGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTY 630

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N L+NG C +G +  A   F ++  +G +P+V+TYN L++  CK G   EA    G + K
Sbjct: 631 NALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLK 690

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G++P  I+Y ++I G C   D+ +A + L  M   +V      ++ +++G  + GD+  
Sbjct: 691 EGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKK 750

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAE-TRGGSIFDAFSLKK 460
              + ++M     S+ + +   + L+E +    + D++++ +
Sbjct: 751 MSKLHNMMHMACPSAGITSHKQMELSELSNAKEMLDSYTISE 792



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 3/167 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I      G +  A  LR +M+ KG VP++ T+N L+N LCK G L++A  +  ++ 
Sbjct: 595 YCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLH 654

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  TYN  I GYC+     +AL L   M   GI P+ +T++ L++  CK+  + 
Sbjct: 655 LKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVE 714

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           +A+K L E+ A +       + T + L++   ++GD  +   L N M
Sbjct: 715 EAMKLLNEMKASN---VDQTIATFSKLVEGCIQHGDVKKMSKLHNMM 758



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 78/158 (49%)

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
           +I+  Y   G + NA  + D M  +G   ++ + N+L+    + G  + A  +  +M   
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            I PDVFT  +++ A C  G +  A++   EM + G   + ++Y  L+ G+ + G+++ A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           + V   +   G+  + +   +L K Y +  + ++A  +
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKV 158


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 204/418 (48%), Gaps = 28/418 (6%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           T L L ++M  +G  P+ +T N L+N  C++G +  A  V+ ++ +M   P+  T N FI
Sbjct: 86  TVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFI 145

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G+C   ++ +AL+    +   G   ++V++  L++ LCK G    A++ L  V    DG
Sbjct: 146 KGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRV----DG 201

Query: 256 KATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           K    + +    ++D   K+     A  L+++M  K I  D+V Y+ LI GF + G +  
Sbjct: 202 KLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKD 261

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A   F +M+     PDV T+N L++  CK+G+L +A +   ++    + P+  ++ T++ 
Sbjct: 262 AIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVD 321

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C    + + +     M+++ + P    +  ++DGY     ++ A  I + M   GV++
Sbjct: 322 GFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTA 381

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           NV ++N +I    +   +  A  L  EM    I PDV TYN LI   C  G I  A QL 
Sbjct: 382 NVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLV 441

Query: 495 DEMLRRGITPDIITY-----------------------TELIKGHCARGNMKEAEEVF 529
           +EM  RG  P+IITY                       T LIKG C  G ++ A +VF
Sbjct: 442 NEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVF 499



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 189/376 (50%), Gaps = 15/376 (3%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I+  CL G+I  AL    K++  G   D +++  L+N LCK+G+   A  ++R +     
Sbjct: 145 IKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLV 204

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
             N   YN  I G  +   ++ A  L+S M    I P+ VT++ L+      G L DA+ 
Sbjct: 205 QLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAID 264

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              +++ ++      DV T  IL+D + K G   +A  + + M  ++I+ ++  +N L++
Sbjct: 265 LFNKMILEN---IKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVD 321

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           GFC +  +      F  M+K+G  P+V+TY +L++  C   ++++A   +  +S+ GV  
Sbjct: 322 GFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTA 381

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           +  SY  +I G C    + KA +  + M  K ++P+   +N +IDG  + G +S AF + 
Sbjct: 382 NVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLV 441

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           + M   G   N+ T+N+++ A            L  ++   GI P++ T  +LI   C  
Sbjct: 442 NEMHDRGQPPNIITYNSILNA------------LLTKLKDQGIQPNMHTDTILIKGLCQS 489

Query: 485 GHIHLALQLYDEMLRR 500
           G +  A ++++++L +
Sbjct: 490 GKLEAARKVFEDLLVK 505



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 161/297 (54%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           ++ S  K+      L+L   M  + I  + V +N+LIN FC  G I  AF+   ++LK G
Sbjct: 74  ILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMG 133

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           + PD+IT NT +   C +G++ +A +F+  L   G   DQ+SY T+I GLC  G+   A 
Sbjct: 134 YEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAAL 193

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + L  +  K V     ++N +IDG  +   +++AF +   M++  +S +V T++ALI   
Sbjct: 194 QLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGF 253

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G + DA  L  +M+L+ I PDV+T+N+L+   C  G +  A  + D M+ + I P++
Sbjct: 254 FIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNV 313

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            T+  L+ G C    MKE + VFA +   G+  + + +  L   Y  +K+ +KA+ I
Sbjct: 314 STFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKI 370



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 181/370 (48%), Gaps = 11/370 (2%)

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           D++ A  +   +    P+     +N  +    +       L L   M   GI PN VT N
Sbjct: 48  DVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFN 107

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           IL++  C+ GL+  A   L ++L         D+IT    +  +   G   QAL   + +
Sbjct: 108 ILINCFCQLGLIPFAFSVLAKILKMG---YEPDIITLNTFIKGFCLKGQIHQALNFHDKL 164

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR--GFLP--DVITYNTLLNCLCK 343
                  D V+Y  LING C  G+  +A     Q+L+R  G L   + + YNT+++ + K
Sbjct: 165 VALGFHLDQVSYGTLINGLCKVGETRAAL----QLLRRVDGKLVQLNAVMYNTVIDGMSK 220

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
              +++A   Y  +    ++PD ++Y  +I+G  I G +  A +    M+ +++ P+ + 
Sbjct: 221 DKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYT 280

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N+++DG+ + G L  A ++ D+M+   +  NV TFN L+    +   + +  ++   M+
Sbjct: 281 FNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMM 340

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             GI P+V TY  L+   C +  ++ A ++++ M +RG+T ++ +Y  +I G C    + 
Sbjct: 341 KQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVD 400

Query: 524 EAEEVFAKIQ 533
           +A ++F ++ 
Sbjct: 401 KAMKLFIEMH 410



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 144/282 (51%), Gaps = 15/282 (5%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   + A+IR   + GK+  A+ L  KMI +   PDV T N LV+  CK G L+KA 
Sbjct: 239 ISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAK 298

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           +V+  M      PN +T+N  + G+C+  ++ +   +F+ M   GI+PN VT+  L+   
Sbjct: 299 NVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 358

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C    +  A K    +        T++V +  I+++ + K     +A+ L+ +M  K+I 
Sbjct: 359 CLVKQVNKAKKIFNTM---SQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHII 415

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+V YN LI+G C +G IS AF    +M  RG  P++ITYN++LN L  +         
Sbjct: 416 PDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTK--------- 466

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
              L   G+ P+  +   +I+GLC  G +  AR+    +L K
Sbjct: 467 ---LKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 130/286 (45%), Gaps = 13/286 (4%)

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           +Q + + Y+ +   F  N D+  A + F  +L +        +N +L      G L ++ 
Sbjct: 30  LQKNFIPYSSISTTFHSN-DVDGAVSLFNSLLHQNPTLTAFEFNKIL------GSLVKSK 82

Query: 352 HFYGVLSKT------GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           H++ VLS +      G+ P+ +++  +I   C  G I  A   L  +L+    P+    N
Sbjct: 83  HYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLN 142

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
             I G+   G +  A +  D +++ G   +  ++  LI    + G    A  L + +   
Sbjct: 143 TFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGK 202

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            +  +   YN +I       H++ A  LY EM+ + I+PD++TY+ LI+G    G +K+A
Sbjct: 203 LVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDA 262

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            ++F K+    +  D   F IL   + +     KA+++    ++++
Sbjct: 263 IDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQD 308


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 220/474 (46%), Gaps = 43/474 (9%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++   C  GK+  A  + +KM ++   P+V+T + ++N   K G L KA  V+REM 
Sbjct: 464 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 523

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN   Y   I GY +  E D A      M +  +  + V  +IL++ L + G + 
Sbjct: 524 QRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMD 583

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A   + ++ +        D++    L+D YFK G++  AL++  +M +KNI+ D+VAYN
Sbjct: 584 EARSLIIDMYSKG---IDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYN 640

Query: 301 VLINGFCLNGDISSAFAYFC-QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
            LI G    G       Y C +M++ G  PD ITYNT++N  C +GK ++A      +  
Sbjct: 641 ALIKGLLRLGKYDPR--YVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKS 698

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG---- 415
            G+ P+ ++Y  +I GLC  G                 VP P     ++  Y R      
Sbjct: 699 YGIMPNAVTYNILIGGLCKTG----------------FVPTPITHKFLVKAYSRSEKADK 742

Query: 416 -------------DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
                        +L     + D M+  G+S+++ T+NALI     G  +  A     +M
Sbjct: 743 ILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQM 802

Query: 463 LLDGIFPDVFTYNLLIGASCNLG----HIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            +DGI P++ TYN L+G   N G     +    +L  EM  RG+ P+  TY  L+ G+  
Sbjct: 803 FVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGR 862

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
            GN K+   +  ++ T G       + +L   Y +  +  +AR++    L + +
Sbjct: 863 VGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGR 916



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 217/450 (48%), Gaps = 24/450 (5%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +     +   M+  G VPDV + N LV+ LCK+GDL+ A   +R    +    +  TY
Sbjct: 108 GLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVV--DIDNVTY 165

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I G+C+   +D+   L S M   G+  + +T NILV   C+ GL+  A   +  ++ 
Sbjct: 166 NTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLV- 224

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             DG  T DVI    L+D Y +     QA  L  + ++ +++ DIV YN L+  FC  GD
Sbjct: 225 --DGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGD 282

Query: 312 ISSAFAYFCQMLK-------------------RGFLPDVITYNTLLNCLCKQGKLDEASH 352
           ++ A + F ++L                    +   P ++TY TL+   CK   ++E+  
Sbjct: 283 LTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHS 342

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            Y  +   G+ PD ++  +I+ G C HG + +A      M E  + P    +  II+   
Sbjct: 343 LYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLF 402

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           + G +  AF+++  M+  G+S ++ T   ++    + G   +A  + + +L   + P+  
Sbjct: 403 KSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCV 462

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY+ L+   C LG + LA  +  +M +  + P++IT++ +I G+  +G + +A +V  ++
Sbjct: 463 TYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREM 522

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARD 562
               +  + I + IL   Y +  E D A D
Sbjct: 523 VQRNVMPNTIVYAILIDGYFKAGEQDVADD 552



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 207/431 (48%), Gaps = 23/431 (5%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREM------------------SEMRP-SPNCATYN 192
           D++T+N L+   CK GDL +A+ +  E+                  +E++   P   TY 
Sbjct: 266 DIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYT 325

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I  YC+   ++++  L+  M  NGI P+ VT + +++  C+ G L +A     E+   
Sbjct: 326 TLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMY-- 383

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
           + G   + V  +TI+ +S FK+G   +A  L + M  + I  DIV    +++G    G  
Sbjct: 384 EMGLDPNHVSYATII-NSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKT 442

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A   F  +LK    P+ +TY+ LL+  CK GK++ A      + K  V P+ I++ +I
Sbjct: 443 KEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSI 502

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I G    G + KA + L  M++++V+P   ++ ++IDGY + G+   A      M S  +
Sbjct: 503 INGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRL 562

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +   F+ L+    R G + +A SL  +M   GI PD+  Y  LI      G+   AL 
Sbjct: 563 EESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALS 622

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           +  EM  + I  D++ Y  LIKG    G   +   V +++  LGLA D I +  +   Y 
Sbjct: 623 IVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTIINTYC 681

Query: 553 RMKESDKARDI 563
              +++ A DI
Sbjct: 682 IKGKTEDALDI 692



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 215/487 (44%), Gaps = 51/487 (10%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            VI   C  G +     L  +M+++G   D +T N LV   C+IG ++ A+ V+  + + 
Sbjct: 167 TVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDG 226

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             + +    N  I GYC    + +A  L      + ++ + VT+N L+ A CK G L  A
Sbjct: 227 GVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRA 286

Query: 243 VKFLGEVLA---DDDGKATSDVITS-------------TILMDSYFKNGDKFQALALWND 286
                E+L    D+D    +DV+T              T L+ +Y K     ++ +L+  
Sbjct: 287 ESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKK 346

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M    I  D+V  + ++ GFC +G ++ A   F +M + G  P+ ++Y T++N L K G+
Sbjct: 347 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 406

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           + EA +    +   G++ D ++  T++ GL   G   +A E   ++L+ ++ P    ++ 
Sbjct: 407 VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 466

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           ++DGY + G +  A  +   M    V  NV TF+++I    + G +  A  + +EM+   
Sbjct: 467 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 526

Query: 467 IFPDVFTYNLLIGAS------------CN-----------------------LGHIHLAL 491
           + P+   Y +LI               C                        +G +  A 
Sbjct: 527 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 586

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            L  +M  +GI PDI+ Y  LI G+   GN   A  +  +++   +  D + +  L K  
Sbjct: 587 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGL 646

Query: 552 RRMKESD 558
            R+ + D
Sbjct: 647 LRLGKYD 653



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 167/352 (47%), Gaps = 38/352 (10%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL + ++M +K    DV+ +N L+  L ++G  +   +V   M E+  +P+C TYN  I 
Sbjct: 620 ALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDCITYNTIIN 678

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV--KFLGEVLADDD 254
            YC   + + AL + + M + GI PN VT+NIL+  LCK G +   +  KFL +  +  +
Sbjct: 679 TYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSE 738

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
            KA   +     L+ S  +   K Q + L ++M ++ I  D+V YN LI G+C    +  
Sbjct: 739 -KADKILQIHEKLVASGLEL--KRQKVVL-DEMVKRGISADLVTYNALIRGYCTGSHVEK 794

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A   + QM   G  P++ TYNTLL                G LS  G+  + +       
Sbjct: 795 ALKTYSQMFVDGIAPNITTYNTLL----------------GGLSNAGLMEEMME------ 832

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
                    +  + +  M E+ +VP    +++++ GYGR G+      +   M++ G   
Sbjct: 833 ---------ETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVP 883

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
            + T+N LI    + G + +A  L  ++L  G  P+ FTY++L     NL +
Sbjct: 884 TLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSY 935



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 196/443 (44%), Gaps = 32/443 (7%)

Query: 150 VPDVLTHNYLVNELCKIGDL-------EKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +P   TH Y V+  C +  L         A      M  +   P    +N  +  +    
Sbjct: 50  IPPTKTHLY-VSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASG 108

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            + +   ++S M   G+ P+  + N+LVH+LCK G L  A+ +L      ++     D +
Sbjct: 109 LVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYL-----RNNDVVDIDNV 163

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   ++  + + G   Q   L ++M ++ +  D +  N+L+ G+C  G +  A      +
Sbjct: 164 TYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNL 223

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           +  G   DVI  NTL++  C+   + +A+       ++ V  D ++Y T+++  C  GD+
Sbjct: 224 VDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDL 283

Query: 383 VKAREFLLSMLE-------------------KSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            +A      +L                    K++ P    +  +I  Y +   +  + S+
Sbjct: 284 TRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSL 343

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+  G+  +V T ++++    R G + +A  L +EM   G+ P+  +Y  +I +   
Sbjct: 344 YKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFK 403

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A  L  +M+ RGI+ DI+T T ++ G    G  KEAEEVF  I  L LA + + 
Sbjct: 404 SGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVT 463

Query: 544 FRILKKRYRRMKESDKARDIHQK 566
           +  L   Y ++ + + A  + QK
Sbjct: 464 YSALLDGYCKLGKMELAELVLQK 486



 Score = 38.9 bits (89), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 6/83 (7%)

Query: 132 GKIGT---ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           G++G     + L  +MI KG VP + T+N L+++  K G + +A  ++ ++      PN 
Sbjct: 861 GRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNS 920

Query: 189 ATYNAFITGYCRVN---ELDKAL 208
            TY+    G+  ++   E+D++L
Sbjct: 921 FTYDILTCGWLNLSYEPEIDRSL 943


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 210/473 (44%), Gaps = 50/473 (10%)

Query: 109 PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           P R     D   +  +I+ LC  G+I  A  +  KM +    P V T+  L++ LCK+  
Sbjct: 152 PRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRR 211

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           + +A+ ++ EM      PN  TYNA I G C+    D    L   M      P+  T+  
Sbjct: 212 VGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQ 271

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDM 287
           +VH LCK G +G   K L E +    GK  + +V+T   L++ Y K GD   AL +   M
Sbjct: 272 VVHGLCKHGKVGHGAKVLHEAI----GKGVALEVLTYNALINGYCKGGDMKAALDVLQLM 327

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL--------- 338
            +  +   +  +N +I+GFC  G +  A A+  QM   G  P+ +T+N+L+         
Sbjct: 328 KRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGER 387

Query: 339 --------------------------NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
                                     + LC +G+L+EA   +  L   G+    + Y ++
Sbjct: 388 KIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSL 447

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           + G C  GDI  A   +  M  ++ +P+ H +N +IDG  +   L  A  + D M   G+
Sbjct: 448 VHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGI 507

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG-----HI 487
                TFN LI          DA  + ++M+  G  PD  TY L I      G     +I
Sbjct: 508 EPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENI 567

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            +A+    EM   G+ PD+ TY  +IK +   G +KE +  FA ++ L + ID
Sbjct: 568 DMAVV---EMHEAGVFPDVETYNAIIKAYVDAG-LKE-KAFFAHVKMLSVPID 615



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 212/439 (48%), Gaps = 11/439 (2%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYLVNE 162
           MR+ G     L  D   +  ++  LC  G +  A  L  +M ++ G   D  ++  L+  
Sbjct: 116 MREAG-----LAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKG 170

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           LC  G ++ A  V  +MS     P   TY   + G C+V  + +A  L   M N G+ PN
Sbjct: 171 LCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPN 230

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
            VT+N L+  LC++G   D  K L ++   +  + + D  T T ++    K+G       
Sbjct: 231 VVTYNALIGGLCQEGRFDDVTKLLEKM---EIQRHSPDCWTYTQVVHGLCKHGKVGHGAK 287

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL-PDVITYNTLLNCL 341
           + ++   K +  +++ YN LING+C  GD+ +A     Q++KR  + P V T+N +++  
Sbjct: 288 VLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVL-QLMKRNRVNPGVQTFNEVIHGF 346

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           C  GK+ +A  F   ++  G++P+ +++ ++I G C  G+   A   L  M E  V+P+ 
Sbjct: 347 CCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDR 406

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             + + ID     G L  A S+   +   G+ ++   + +L+    + G I  AF L ++
Sbjct: 407 QTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEK 466

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           M  +   PDV TYN LI   C +  +  A+ L D+M ++GI P   T+  LIK       
Sbjct: 467 MASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKK 526

Query: 522 MKEAEEVFAKIQTLGLAID 540
             +A +++ ++ + G   D
Sbjct: 527 HADAAKMYEQMISSGCKPD 545



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 206/444 (46%), Gaps = 25/444 (5%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  V+  LC  GK+G    +  + I KG   +VLT+N L+N  CK GD++ A  V+
Sbjct: 265 DCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVL 324

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           + M   R +P   T+N  I G+C   ++ KA+   + MA  G+ PN VT N L+   C  
Sbjct: 325 QLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSV 384

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G    A++ L   L ++ G    D  T  I +D+    G   +A +L++ +  K I+   
Sbjct: 385 GERKIALRLLD--LMEEYG-VLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHN 441

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  L++G+C  GDI SAF    +M     +PDV TYNTL++ LCK  +LD A      
Sbjct: 442 VIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDK 501

Query: 357 LSKTGVAPDQISYKTIIQGLCI---HGDIVKAREFLLSMLEKSVVPEPHIWNVII--DGY 411
           + K G+ P   ++  +I+ +     H D  K  E    M+     P+   + + I  D +
Sbjct: 502 MKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYE---QMISSGCKPDKQTYTLKISTDWF 558

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
                  N       M   GV  +V T+NA+I A    G    AF    +ML   I PD 
Sbjct: 559 EGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDC 618

Query: 472 FTYNLLIGASCN--------------LGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
            TY++L+   CN              +  +    +L+++M      P I TY  L++G C
Sbjct: 619 TTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLC 678

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDH 541
            +  ++E E +  K+Q   + +D 
Sbjct: 679 NQCRLEEVEWLLLKMQGNSILLDE 702



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 196/424 (46%), Gaps = 6/424 (1%)

Query: 152 DVLTHNY-LVNELCKIGDLEKADHVIREMSEMRPS---PNCATYNAFITGYCRVNELDKA 207
           DV +HN  L+    +     +  H++     M  S   PN  TYN  I  +C++  L  A
Sbjct: 50  DVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADA 109

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
                 M   G+ P+  T+N L+  LC+ GLL  A      V       A  D  + TIL
Sbjct: 110 RAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLF--VQMPRRWGACYDRYSYTIL 167

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +      G    A  ++  M +   +  +  Y VL++G C    +  A A   +M+ +G 
Sbjct: 168 IKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGV 227

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +P+V+TYN L+  LC++G+ D+ +     +     +PD  +Y  ++ GLC HG +    +
Sbjct: 228 VPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAK 287

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L   + K V  E   +N +I+GY + GD+  A  +  LM    V+  V TFN +I    
Sbjct: 288 VLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFC 347

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
            GG +  A +   +M   G+ P+  T+N LI   C++G   +AL+L D M   G+ PD  
Sbjct: 348 CGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQ 407

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           TY   I   C  G ++EA  +F+ +   G+   ++ +  L   Y ++ + D A  + +K 
Sbjct: 408 TYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKM 467

Query: 568 LLRN 571
              N
Sbjct: 468 ASEN 471



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 190/424 (44%), Gaps = 4/424 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++ G  P+  T+N L+N  CK+  L  A   +  M E   +P+  TYN  + G CR   
Sbjct: 81  MLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGL 140

Query: 204 LDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           L  A  LF  M    G   +R ++ IL+  LC  G + DA +   ++     G     V 
Sbjct: 141 LAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKM---SRGWCRPGVH 197

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T T+L+D   K     +A AL  +M  K +  ++V YN LI G C  G          +M
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
             +   PD  TY  +++ LCK GK+   +         GVA + ++Y  +I G C  GD+
Sbjct: 258 EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDM 317

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A + L  M    V P    +N +I G+   G +  A +    M   G+S N  TFN+L
Sbjct: 318 KAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSL 377

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I  +   G    A  L   M   G+ PD  TY + I A C+ G +  A  L+  +  +GI
Sbjct: 378 ISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGI 437

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
               + YT L+ G+C  G++  A  +  K+ +     D   +  L     ++K  D+A D
Sbjct: 438 KAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAID 497

Query: 563 IHQK 566
           +  K
Sbjct: 498 LLDK 501



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 196/463 (42%), Gaps = 15/463 (3%)

Query: 109 PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           P RCT  T    H       C    +  A     +M + G  PD  T+N L+  LC+ G 
Sbjct: 88  PNRCTYNTLINAH-------CKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGL 140

Query: 169 LEKADHVIREMSEMRPSPNCA---TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
           L  A  +  +M   R    C    +Y   I G C    +D A  +F+ M+    RP   T
Sbjct: 141 LAAACGLFVQMP--RRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHT 198

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
           + +L+  LCK   +G+A   LGE++   +     +V+T   L+    + G       L  
Sbjct: 199 YTVLLDGLCKVRRVGEAEALLGEMV---NKGVVPNVVTYNALIGGLCQEGRFDDVTKLLE 255

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M  +    D   Y  +++G C +G +        + + +G   +V+TYN L+N  CK G
Sbjct: 256 KMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGG 315

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
            +  A     ++ +  V P   ++  +I G C  G + KA  FL  M    + P    +N
Sbjct: 316 DMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFN 375

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            +I G    G+   A  + DLM  +GV  +  T+   I A    G + +A SL   + + 
Sbjct: 376 SLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMK 435

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           GI      Y  L+   C +G I  A  L ++M      PD+ TY  LI G C    +  A
Sbjct: 436 GIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRA 495

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            ++  K++  G+      F IL K+    K+   A  ++++ +
Sbjct: 496 IDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMI 538



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/413 (23%), Positives = 163/413 (39%), Gaps = 17/413 (4%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D + +   I  LC  G++  A  L   +  KG     + +  LV+  C++GD++ A  ++
Sbjct: 405 DRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLM 464

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M+     P+  TYN  I G C+V  LD+A+ L   M   GI P   T NIL+  +   
Sbjct: 465 EKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWD 524

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW-NDMFQKNIQTD 295
               DA K   E +     K      T  I  D +F+   K + + +   +M +  +  D
Sbjct: 525 KKHADAAKMY-EQMISSGCKPDKQTYTLKISTD-WFEGATKEENIDMAVVEMHEAGVFPD 582

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD------- 348
           +  YN +I  +   G    AF    +ML     PD  TY+ LLN +C +   D       
Sbjct: 583 VETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKI 642

Query: 349 -------EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
                       +  + ++  AP   +YK +++GLC    + +    LL M   S++ + 
Sbjct: 643 WKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDE 702

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
            + + ++  Y        A      M        + +   L+      G    A S+  +
Sbjct: 703 DMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSD 762

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           ML  G   D   + LLI      GH    L++   M  +       TY  L++
Sbjct: 763 MLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLVR 815


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 204/408 (50%), Gaps = 3/408 (0%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L ++M   G   + +T N L+N  C +  +  A  V  ++ ++   P+  TY   I G C
Sbjct: 71  LFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLC 130

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
              ++ ++L+    + + GI+ + V++  L++ LCK G  G A++ L ++  +       
Sbjct: 131 LNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGE---ICRP 187

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DV+    ++D   K+     A  L+ +MF+K +  ++V Y  LI GFC+ G +  AF   
Sbjct: 188 DVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLL 247

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M+ +   P+V T+NTL++ LCK+GK+ EA     V+ K GV PD  +Y  ++ G  + 
Sbjct: 248 NEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLV 307

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
            +  KA+     M +  V  + H ++V+I G  +   L  A  + + M +  V  +V  +
Sbjct: 308 KEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAY 367

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           ++LI    + G I  A     EM   G  P+V TY  LI A C    +  A+ L  ++  
Sbjct: 368 SSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKD 427

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +GI  ++ TY  L+ G C  G + +A++VF  +   G  +D + + I+
Sbjct: 428 QGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIM 475



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 222/450 (49%), Gaps = 3/450 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++++Y     +I   C   +I +A  +  K+++ G  PD++T+  L+  LC  G ++++ 
Sbjct: 80  IQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESL 139

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           +    +       +  +Y   I G C++ +   AL L   +     RP+ V +N ++  L
Sbjct: 140 NFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGL 199

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK  L+ DA     E+    + +   +V+T T L+  +   G   +A  L N+M  KN+ 
Sbjct: 200 CKDKLVRDAFDLYCEMF---EKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVN 256

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++  +N L++G C  G +  A +    M+K G  PDV TYN L++      +  +A + 
Sbjct: 257 PNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNV 316

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           + ++++ GV  D  SY  +I GL     + +A +    M  ++V+P+   ++ +IDG  +
Sbjct: 317 FNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCK 376

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G +++A    D M   G   NV T+ +LI A  +   +  A +L K++   GI  +++T
Sbjct: 377 SGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYT 436

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN+L+   C  G +  A +++ ++L +G   D++TY+ +I G C      EA  + +K++
Sbjct: 437 YNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKME 496

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDI 563
             G   D I +  +   +     +DKA  +
Sbjct: 497 DKGCVPDAIAYETIINAFFEKDMNDKAEKL 526



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 209/428 (48%), Gaps = 3/428 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M++    P ++    ++  L K        H+ + M       N  T N  I  YC + 
Sbjct: 39  RMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLR 98

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +++ A  +F+ +   G +P+ +T+  L+  LC  G + +++ F   +++        D +
Sbjct: 99  QINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG---IKLDHV 155

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           +   L++   K G    AL L   +  +  + D+V YN +I+G C +  +  AF  +C+M
Sbjct: 156 SYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEM 215

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            ++   P+V+TY +L+   C  G+LD+A      +    V P+  ++ T++ GLC  G +
Sbjct: 216 FEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKM 275

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A+  +  M+++ V P+   +N ++DGY    +   A ++ ++M   GV+ +V +++ +
Sbjct: 276 REAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVM 335

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I   ++   + +A  L + M  + + PDV  Y+ LI   C  G I+ AL+  DEM  RG 
Sbjct: 336 ISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQ 395

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            P++ITYT LI   C    + +A  +  KI+  G+  +   + IL     +      A+ 
Sbjct: 396 PPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQK 455

Query: 563 IHQKWLLR 570
           + Q  L++
Sbjct: 456 VFQDLLMK 463



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 201/418 (48%), Gaps = 3/418 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   +  +IR LCL G++  +L    +++ +G   D +++  L+N LCKIG    A  
Sbjct: 116 QPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALR 175

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++R++      P+   YN  I G C+   +  A  L+  M    + PN VT+  L++  C
Sbjct: 176 LLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFC 235

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G L  A   L E++  +      +V T   L+D   K G   +A +L   M ++ +  
Sbjct: 236 IVGQLDKAFGLLNEMVLKN---VNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGP 292

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D+  YN L++G+ L  +   A   F  M + G   DV +Y+ +++ L K   LDEA   +
Sbjct: 293 DVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLF 352

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +    V PD ++Y ++I GLC  G I  A +++  M ++   P    +  +ID   + 
Sbjct: 353 EGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKS 412

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
             +  A ++   +   G+ +N++T+N L+    + G + DA  + +++L+ G   DV TY
Sbjct: 413 HQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTY 472

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           +++I   C       AL L  +M  +G  PD I Y  +I     +    +AE++  ++
Sbjct: 473 SIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 133/284 (46%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A+  +N M +      I+ +  ++               F +M   G   + IT N L+N
Sbjct: 33  AIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILIN 92

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C   +++ A   +  + K G  PD I+Y T+I+GLC++G + ++  F   ++ + +  
Sbjct: 93  SYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKL 152

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   +  +I+G  + G    A  +   +       +V  +N +I    +   + DAF L 
Sbjct: 153 DHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLY 212

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            EM    +FP+V TY  LI   C +G +  A  L +EM+ + + P++ T+  L+ G C  
Sbjct: 213 CEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKE 272

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           G M+EA+ + A +   G+  D   +  L   Y  +KE+ KA+++
Sbjct: 273 GKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNV 316



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 6/168 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I  LC   ++  A+ L +K+  +G   ++ T+N LV+ LCK G L  A  V +++ 
Sbjct: 402 YTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLL 461

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               + +  TY+  I G C+ +  D+AL L S M + G  P+ + +  +++A  +K +  
Sbjct: 462 MKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMND 521

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
            A K L E++   D K   D        D Y +   K   LA WN  +
Sbjct: 522 KAEKLLREMIDCVDYKDNGDTC------DQYDEFICKRSILASWNSSY 563


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 218/449 (48%), Gaps = 9/449 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  V+R LC   + G A+ L R M   G   DV+T+  L+  LC   +L+ A  ++ EM 
Sbjct: 126 YTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMC 185

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN   Y+  + GYCR         +F  M+  GI+P+ +    L+  LCK+G  G
Sbjct: 186 GSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTG 245

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A K    ++         +V+T  +L++S  K G   +AL L  +M  K +  D+V YN
Sbjct: 246 KAAKVKDMMVQRG---LEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYN 302

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFL--PDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
            LI G     ++  A ++  +M++   +  PDV+T+N++++ LCK G++ +A     +++
Sbjct: 303 TLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMA 362

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           + G   + ++Y  +I G      +  A   +  +    + P+   ++++I+G+ +  ++ 
Sbjct: 363 ERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVD 422

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLL 477
            A      M   G+ + +F +  L+ A  + G +  A  L  EM  + G+  D   Y+ +
Sbjct: 423 RAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGL--DAIAYSTM 480

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I  +C  G +    QL  +ML  G+ PD +TY+ LI  +   G+++EAE V  ++   G 
Sbjct: 481 IHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGF 540

Query: 538 AIDHIPFRILKKRYRRMKESDKA-RDIHQ 565
             D   F  L K Y    ++DK  + IH+
Sbjct: 541 VPDVAVFDSLIKGYSAEGQTDKVLKLIHE 569



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 206/419 (49%), Gaps = 8/419 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+ +++  ++  LC      +A  ++R M       +  TY   I G C  +ELD AL L
Sbjct: 121 PNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALEL 180

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS-DVITSTILMD 269
              M  +G++PN V ++ L+   C+ G   D    +G+V  D   +    DVI  T L+D
Sbjct: 181 LDEMCGSGVQPNVVVYSCLLRGYCRSGRWQD----VGKVFEDMSRRGIKPDVIMFTGLID 236

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K G   +A  + + M Q+ ++ ++V YNVLIN  C  G +  A     +M  +G  P
Sbjct: 237 DLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAP 296

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYG--VLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           DV+TYNTL+  L    ++DEA  F    +   T V PD +++ ++I GLC  G + +A +
Sbjct: 297 DVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVK 356

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M E+  +     +N +I G+ R   +  A ++ D +   G+  + FT++ LI   +
Sbjct: 357 VREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFS 416

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +   +  A      M   GI  ++F Y  L+ A C  G +  A+ L++EM  +    D I
Sbjct: 417 KMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAI 475

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            Y+ +I G C  G+MK  +++   +   GLA D + + +L   Y ++ + ++A  + ++
Sbjct: 476 AYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQ 534



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 182/354 (51%), Gaps = 6/354 (1%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  ++ D      +I DLC  GK G A  ++  M+Q+G  P+V+T+N L+N LCK G + 
Sbjct: 221 RRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVR 280

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM--ANNGIRPNRVTHNI 228
           +A  + +EM +   +P+  TYN  I G   V E+D+A+     M   +  + P+ VT N 
Sbjct: 281 EALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNS 340

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++H LCK G +  AVK + E++A+       +++T   L+  + +      A+ L +++ 
Sbjct: 341 VIHGLCKIGRMTQAVK-VREMMAERG--CMCNLVTYNYLIGGFLRVHKVKMAMNLMDELA 397

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
              ++ D   Y++LINGF    ++  A  + C M +RG   ++  Y  LL  +C+QG ++
Sbjct: 398 ISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMME 457

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            A   +  + K     D I+Y T+I G C  GD+   ++ +  ML++ + P+   ++++I
Sbjct: 458 RAMGLFNEMDKN-CGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLI 516

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
           + Y + GDL  A  +   M + G   +V  F++LI   +  G       L  EM
Sbjct: 517 NMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEM 570



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/521 (23%), Positives = 238/521 (45%), Gaps = 30/521 (5%)

Query: 40  SRTCSDDDNLPCTLNDIMSY---VGDQCRSKTRHWFSNK----DSDNEGNPQAVFNALDL 92
           +  CS    LP  + D +SY   +   CR    H    +    D   E +P A  NA+  
Sbjct: 68  TEACSLLSALP-DVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSY 126

Query: 93  IL-----------KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLR 141
                         E +  L++M+ +G     +  D   +  +IR LC   ++  AL L 
Sbjct: 127 TTVMRGLCASRRTGEAVALLRSMQASG-----VRADVVTYGTLIRGLCDASELDAALELL 181

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
            +M   G  P+V+ ++ L+   C+ G  +    V  +MS     P+   +   I   C+ 
Sbjct: 182 DEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKE 241

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            +  KA  +   M   G+ PN VT+N+L+++LCK+G + +A+    E+   DD     DV
Sbjct: 242 GKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEM---DDKGVAPDV 298

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKN--IQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +T   L+       +  +A++   +M Q +  ++ D+V +N +I+G C  G ++ A    
Sbjct: 299 VTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVR 358

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M +RG + +++TYN L+    +  K+  A +    L+ +G+ PD  +Y  +I G    
Sbjct: 359 EMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKM 418

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
            ++ +A +FL +M ++ +  E   +  ++    + G +  A  + + M       +   +
Sbjct: 419 WEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAY 477

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           + +I    + G +     L ++ML +G+ PD  TY++LI     LG +  A ++  +M  
Sbjct: 478 STMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTA 537

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            G  PD+  +  LIKG+ A G   +  ++  +++   +A D
Sbjct: 538 SGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFD 578



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 169/343 (49%), Gaps = 8/343 (2%)

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA----TSDVITSTILMDSYFKNGDKFQ 279
           V++N ++ ALC++G  GD ++    +L D   +A      + ++ T +M     +    +
Sbjct: 84  VSYNTVLAALCRRG--GDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A+AL   M    ++ D+V Y  LI G C   ++ +A     +M   G  P+V+ Y+ LL 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C+ G+  +    +  +S+ G+ PD I +  +I  LC  G   KA +    M+++ + P
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +NV+I+   + G +  A ++R  M   GV+ +V T+N LI   +    + +A S  
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321

Query: 460 KEMLLDG--IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           +EM+     + PDV T+N +I   C +G +  A+++ + M  RG   +++TY  LI G  
Sbjct: 322 EEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFL 381

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
               +K A  +  ++   GL  D   + IL   + +M E D+A
Sbjct: 382 RVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRA 424



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 143/274 (52%), Gaps = 6/274 (2%)

Query: 137 ALWLRRKMIQKGTV--PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
           A+    +MIQ  TV  PDV+T N +++ LCKIG + +A  V   M+E     N  TYN  
Sbjct: 317 AMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYL 376

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           I G+ RV+++  A++L   +A +G+ P+  T++IL++   K   +  A KFL  +     
Sbjct: 377 IGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTM---RQ 433

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
               +++     L+ +  + G   +A+ L+N+M  KN   D +AY+ +I+G C +GD+ +
Sbjct: 434 RGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKT 492

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
                  ML  G  PD +TY+ L+N   K G L+EA      ++ +G  PD   + ++I+
Sbjct: 493 VKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIK 552

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           G    G   K  + +  M  K+V  +P I + II
Sbjct: 553 GYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 129/262 (49%), Gaps = 4/262 (1%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
            +E D     +VI  LC  G++  A+ +R  M ++G + +++T+NYL+    ++  ++ A
Sbjct: 330 VVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMA 389

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
            +++ E++     P+  TY+  I G+ ++ E+D+A     TM   GI+     +  L+ A
Sbjct: 390 MNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAA 449

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           +C++G++  A+    E+    D     D I  + ++    K+GD      L  DM  + +
Sbjct: 450 MCQQGMMERAMGLFNEM----DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGL 505

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D V Y++LIN +   GD+  A     QM   GF+PDV  +++L+     +G+ D+   
Sbjct: 506 APDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLK 565

Query: 353 FYGVLSKTGVAPDQISYKTIIQ 374
               +    VA D     TII+
Sbjct: 566 LIHEMRAKNVAFDPKIISTIIR 587


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 210/414 (50%), Gaps = 8/414 (1%)

Query: 109 PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           P+ C +E D      ++  L      GT L L +++       DV   N L+N   ++  
Sbjct: 80  PLPCIVEFD-----KLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQR 134

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           ++ A  V+ ++ ++   P+  T+++ I G C  ++  +A+  F  M  +G +PN  T+N 
Sbjct: 135 VDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNT 194

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++   CK G    AV  L ++   D      D++    ++D   K+    +AL +++++ 
Sbjct: 195 IIKGFCKIGKTTVAVGLLKKM---DKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIK 251

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            K ++ D+  Y++L++G C +     A A F +M+    +PDV+T+N L++ LCK+G L 
Sbjct: 252 GKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLS 311

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA     ++ + GV P+  +Y +++ G C+   + +AR    +M+ K  +P    +N++I
Sbjct: 312 EAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILI 371

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           +GY +   +  A  + D M   G+  N F +N LI    + G   +A  L K+M   G  
Sbjct: 372 NGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCS 431

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           PD+ T  +L+ + C LG++  AL+L+  M    + P+++TY  LI+     G +
Sbjct: 432 PDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 173/344 (50%), Gaps = 3/344 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++   E D     ++I  LC   K   A+    +M+  G  P++ T+N ++   CKIG  
Sbjct: 146 IKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKT 205

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A  ++++M +    P+   YN  I G C+   + +AL +FS +   G+RP+  T++IL
Sbjct: 206 TVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSIL 265

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +H LC      +A     E+++ +      DV+T  IL+D   K G   +A  +   M +
Sbjct: 266 MHGLCNSDQKEEASALFNEMMSLN---IMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIE 322

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K ++ +   YN L+NG+CL   +  A   F  M+ +G +P+V++YN L+N  CK  ++DE
Sbjct: 323 KGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDE 382

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   +  +S  G+ P+  +Y T+I GLC  G   +ARE    M  +   P+     +++D
Sbjct: 383 ARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLD 442

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
              + G L NA  +   M    +  N+ T++ LI A  + G I+
Sbjct: 443 SLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIY 486



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 205/431 (47%), Gaps = 6/431 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C    I  AL+    MI K  +P ++  + L++ L +I        + + +  +R   + 
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             +N  I  + R+  +D A  +   +   G  P+ VT + L++ LC +     A++F  E
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           ++A        ++ T   ++  + K G    A+ L   M +   + DIV YN +I+G C 
Sbjct: 180 MVASG---YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCK 236

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           +  +S A   F ++  +G  PDV TY+ L++ LC   + +EAS  +  +    + PD ++
Sbjct: 237 DRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVT 296

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           +  ++  LC  G + +A+  +  M+EK V P    +N +++GY     +  A  + D M+
Sbjct: 297 FNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMI 356

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           + G   NV ++N LI    +   I +A  L  EM   G+ P+ F YN LI   C  G   
Sbjct: 357 TKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHC 416

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A +L+ +M  +G +PD++T T L+   C  G +  A  +F  +Q   L  + + + IL 
Sbjct: 417 EARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDIL- 475

Query: 549 KRYRRMKESDK 559
              R M +S K
Sbjct: 476 --IRAMYKSGK 484



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 142/279 (50%)

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           I+ D+  +N+LIN F     +  AF+   +++K GF PD +T+++L+N LC + K   A 
Sbjct: 115 IERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAM 174

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
            F+  +  +G  P+  +Y TII+G C  G    A   L  M +    P+  I+N IIDG 
Sbjct: 175 EFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGL 234

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +   +S A  I   +   GV  +VFT++ L+          +A +L  EM+   I PDV
Sbjct: 235 CKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            T+N+L+   C  G +  A  +   M+ +G+ P+  TY  L+ G+C +  + EA  VF  
Sbjct: 295 VTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDA 354

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           + T G   + + + IL   Y + +  D+AR++  +   R
Sbjct: 355 MITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFR 393



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 140/294 (47%), Gaps = 32/294 (10%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I+  C  GK   A+ L +KM + G  PD++ +N +++ LCK   + +A  +  E+   
Sbjct: 194 TIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGK 253

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY+  + G C  ++ ++A  LF+ M +  I P+ VT NILV  LCK+G+L +A
Sbjct: 254 GVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEA 313

Query: 243 ---VKFL-----------------GEVLADDDGKA------------TSDVITSTILMDS 270
              +K +                 G  L +   +A              +V++  IL++ 
Sbjct: 314 QGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILING 373

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           Y K     +A  L+++M  + +  +   YN LI+G C  G    A   F  M  +G  PD
Sbjct: 374 YCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPD 433

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           ++T   LL+ LCK G LD A   +  +  + + P+ ++Y  +I+ +   G I +
Sbjct: 434 LVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 216/446 (48%), Gaps = 5/446 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L+ L  M D G    T   +   +  VI  LC    +  A  + + MI KG  P+  
Sbjct: 181 EEALELLSMMADDGDGSHT--PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNH 238

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  L++    IG  ++   +++EMS     P+C  Y   +   C+     +A ++F ++
Sbjct: 239 TYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSV 298

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              GI+PN   + IL+H    +G L +   FL  ++ +     + D     I+  +Y K 
Sbjct: 299 IRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNG---VSPDHHIFNIMFCAYAKK 355

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
               +A+ +++ M Q+ +  +IV Y  LI+  C  G +  A   F QM+  G  PD+  +
Sbjct: 356 AMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVF 415

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           ++L+  LC   K ++A   +  +   G+  D + + T++  LC  G +++A+  +  ML 
Sbjct: 416 SSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLR 475

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             V P+   +N ++DG+   G +  A  + D+++S G+  +  T+N L+    +   I D
Sbjct: 476 VGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDD 535

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A+SL +EML+ G+ PDV TYN ++      G    A +LY  M+      +I TY  +I 
Sbjct: 536 AYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIIN 595

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAID 540
           G C    + EA ++F  + +  L +D
Sbjct: 596 GLCKNNFVDEAFKMFHSLCSKDLQLD 621



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 201/424 (47%), Gaps = 3/424 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G  PD    N +     K   +++A H+  +M + R SPN  TY A I   C++  
Sbjct: 333 MVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGR 392

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A+  F+ M + G+ P+    + LV+ LC       A +   EVL  D G     V  
Sbjct: 393 VDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVL--DQGIRLDTVFF 450

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           +T LM +  + G   +A  L + M +  ++ D+++YN L++G CL G I  A      ++
Sbjct: 451 NT-LMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIV 509

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  PD +TYNTLL+  CK  ++D+A   +  +   G+ PD ++Y TI+ GL   G   
Sbjct: 510 SIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFS 569

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A+E  LSM+        + +N+II+G  +   +  AF +   + S  +  ++FT N +I
Sbjct: 570 EAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMI 629

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            A  +GG   DA  L   +   G+ PDV TY L+       G +    +L+  M   G  
Sbjct: 630 GALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTA 689

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P+      L++    RG++  A    +K+     +++     +L   Y R +    A+ +
Sbjct: 690 PNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSRGEYQQLAKSL 749

Query: 564 HQKW 567
            +K+
Sbjct: 750 PEKY 753



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 209/471 (44%), Gaps = 40/471 (8%)

Query: 140 LRRKMIQKGTV---PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN-CATYNAFI 195
           L  +MI++ ++   P   T+  L+   C++G L+        + +     N    ++  +
Sbjct: 76  LFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLL 135

Query: 196 TGYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
            G C    +D+A   L   M   G  P+  +++IL+   C +    +A++ L  +  D D
Sbjct: 136 KGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGD 195

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           G  T +V+T T ++D   K     +A  ++  M  K ++ +   Y  LI+G+   G    
Sbjct: 196 GSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKE 255

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
                 +M   G  PD   Y  LL+ LCK G+  EA + +  + + G+ P+   Y  ++ 
Sbjct: 256 VVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLH 315

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G    G + +   FL  M+   V P+ HI+N++   Y +   +  A  I D M    +S 
Sbjct: 316 GYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSP 375

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL---------- 484
           N+ T+ ALI A  + G + DA     +M+ +G+ PD+F ++ L+   C +          
Sbjct: 376 NIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELF 435

Query: 485 -------------------------GHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
                                    G +  A +L D MLR G+ PD+I+Y  L+ GHC  
Sbjct: 436 FEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLT 495

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           G + EA ++   I ++GL  D + +  L   Y + +  D A  + ++ L++
Sbjct: 496 GRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMK 546



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 136/295 (46%), Gaps = 10/295 (3%)

Query: 281 LALWNDMFQK---NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF-LPDVITYNT 336
           ++L+N M ++    +      Y +LI  FC  G +   FA F  +LK G+ + D + ++ 
Sbjct: 74  VSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQ 133

Query: 337 LLNCLCKQGKLDEASH-FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML-- 393
           LL  LC   ++DEA+      + + G  PD  SY  +++G C      +A E LLSM+  
Sbjct: 134 LLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALE-LLSMMAD 192

Query: 394 --EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
             + S  P    +  +IDG  +   +  A  +   M+  GV  N  T+  LI      G 
Sbjct: 193 DGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGK 252

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
             +   + +EM   G+ PD + Y +L+   C  G    A  ++D ++R+GI P++  Y  
Sbjct: 253 WKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGI 312

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           L+ G+   G++ E       +   G++ DH  F I+   Y +    D+A  I  K
Sbjct: 313 LLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDK 367



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 3/230 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   L+ D   +  ++   C   +I  A  L R+M+ KG  PDV+T+N +++ L + G  
Sbjct: 509 VSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRF 568

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A  +   M   R   N  TYN  I G C+ N +D+A  +F ++ +  ++ +  T NI+
Sbjct: 569 SEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIM 628

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           + AL K G   DA+     + A        DV T  ++ ++  K G   +   L++ M +
Sbjct: 629 IGALLKGGRKEDAMDLFATISA---YGLVPDVETYCLIAENLIKEGSLEELDELFSAMEE 685

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
                +    N L+      GDI+ A AY  ++ ++ F  +  T + L++
Sbjct: 686 NGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLIS 735


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 197/406 (48%), Gaps = 6/406 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   L  +   +  VI  LC  G +  A+ L RKM +KG   +  T   L+N  CK   +
Sbjct: 434 VEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKM 493

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  +  +M+E    PN  T+NA I GYC V ++ KA  L+  M   G+ P+  T+  L
Sbjct: 494 DEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSL 553

Query: 230 VHALCKKGLLGDAVKFLGEVLAD-DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           +  LC    L D      E +AD ++  +  +  + T L+  + + G   +A  +WN+M 
Sbjct: 554 ISGLC----LTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMA 609

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
               + D++++ +++       D   +   F +M ++G  PD + +  ++N   K+G + 
Sbjct: 610 MWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMV 669

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           +A + +  +   G  P+ ++Y  ++  LC    +  A      ML    +P  + +N  +
Sbjct: 670 QALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFL 729

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           D +   G+L  A  +   ML  G  +N+ + N LI    + G I +A  L      +G F
Sbjct: 730 DYFATEGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFF 788

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           PD  +Y+ +I   C  G I+ A++L++EML +G+ PDI+ Y  LI+
Sbjct: 789 PDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIR 834



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 223/511 (43%), Gaps = 72/511 (14%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++ ++C  G    A  L  +M  KG  P+ +T+  L++ LCK G ++ A  ++  M E 
Sbjct: 342 ALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREK 401

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
                   YN+ I   C+ ++LD A+   S M   G+ PN  +++ ++  LC+KG L  A
Sbjct: 402 GVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGA 461

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V+ L   +A+       +  T T L++ + K     +A  L+N M + N++ + V +N +
Sbjct: 462 VE-LHRKMAEKG--VAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAV 518

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL---------------------NC- 340
           I G+CL GDI  AF  + QM+ RG  PD  TY +L+                     NC 
Sbjct: 519 IEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCS 578

Query: 341 -------------LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
                         C++G+L EA H +  ++  G   D IS+  I+       D  K+  
Sbjct: 579 VLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCV 638

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M EK V P+      +I+ Y + G++  A +  D M++ G   N  T+ AL+    
Sbjct: 639 LFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLC 698

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTY--------------------------------- 474
           +   +  A  L KEML     P+ +T+                                 
Sbjct: 699 KSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLANIVS 758

Query: 475 -NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            N LI   C +G I  A+ L       G  PD I+Y+ +I   C +G++ EA E++ ++ 
Sbjct: 759 VNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEML 818

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
             G+  D + + IL +      ESDK   I+
Sbjct: 819 YKGVKPDIVAYNILIRWCNIHGESDKCLGIY 849



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 189/395 (47%), Gaps = 3/395 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++  A  L  ++ +   VP++  +N L+N +CK G   +AD ++ EMS+    PN  TY
Sbjct: 316 GRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTY 375

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I   C+   +D AL +   M   G+R     +N L++  CKK  L  A+ FL E++ 
Sbjct: 376 AILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMV- 434

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +   T +  + + ++    + GD   A+ L   M +K +  +   +  LINGFC    
Sbjct: 435 --EIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKK 492

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F +M +    P+ +T+N ++   C  G + +A   Y  +   G+ PD  +Y++
Sbjct: 493 MDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRS 552

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC+     KA+EF+  +     V        ++ G+ R G L+ A+ + + M  +G
Sbjct: 553 LISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWG 612

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              ++ +F  ++ A  +      +  L +EM   G+ PD   +  +I      G++  AL
Sbjct: 613 GKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQAL 672

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             +DEM+  G  P+ +TYT L+   C   ++  AE
Sbjct: 673 NCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAE 707



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 187/390 (47%), Gaps = 3/390 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G + D   +   +   C++ +L+ A  ++  M +     +   YN  I G C+   
Sbjct: 188 MLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQR 247

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           + +A+ + ++M   G+  + VT   LV+  C+   L  A++  G++     G   S+   
Sbjct: 248 VREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMA--RLGFVPSEA-N 304

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            + ++D   K G   +A  L   + +  +  +I AYN L+N  C NG  S A     +M 
Sbjct: 305 CSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMS 364

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            +G  P+ +TY  L++ LCK+G +D+A      + + GV      Y ++I   C   D+ 
Sbjct: 365 DKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLD 424

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A  FL  M+E  + P    ++ +I G  R GDLS A  +   M   GV+ N +TF ALI
Sbjct: 425 MAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALI 484

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               +   + +A  L  +M    + P+  T+N +I   C +G I  A QLYD+M+ RG+T
Sbjct: 485 NGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLT 544

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           PD  TY  LI G C      +A+E  A ++
Sbjct: 545 PDNYTYRSLISGLCLTDGASKAKEFVADLE 574



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 182/426 (42%), Gaps = 38/426 (8%)

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           +  G  PD  T + ++  L KI     A H+   M       +   Y A I  YC V  L
Sbjct: 154 LSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNL 213

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D A  L + M + G + + V +N+L++ LCK   + +AV     +LA       +D +T 
Sbjct: 214 DGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARG---VAADEVTC 270

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
             L+  + +  +   AL +  DM +          + +++G    G +  AF   CQ+ +
Sbjct: 271 RTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGE 330

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
              +P++  YN LLN +CK G   EA      +S  G+ P++++Y  +I  LC       
Sbjct: 331 LRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLC------- 383

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
                                       + G + +A  + D M   GV   V+ +N+LI 
Sbjct: 384 ----------------------------KRGMMDDALCMLDRMREKGVRMTVYPYNSLIN 415

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              +   +  A     EM+  G+ P+  +Y+ +I   C  G +  A++L+ +M  +G+  
Sbjct: 416 CCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAW 475

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
           +  T+T LI G C    M EA  +F K+    L  + + F  + + Y  + +  KA  ++
Sbjct: 476 NTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLY 535

Query: 565 QKWLLR 570
            + + R
Sbjct: 536 DQMMCR 541



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 160/373 (42%), Gaps = 47/373 (12%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE +     AVI   CL G I  A  L  +M+ +G  PD  T+  L++ LC      KA 
Sbjct: 508 LEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAK 567

Query: 174 HVIREMSEMRPSPNCATYNAF-----ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
             + ++       NC+  N F     + G+CR   L +A H+++ MA  G + + ++  I
Sbjct: 568 EFVADLEN-----NCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTI 622

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           +V+A  K+     +     E+    +     D +  T +++ Y K G+  QAL  W++M 
Sbjct: 623 IVYAALKQHDSEKSCVLFREM---KEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMI 679

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK------------------------ 324
                 + V Y  L+N  C +  +SSA     +ML                         
Sbjct: 680 ADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLE 739

Query: 325 ----------RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
                     +GFL ++++ NTL+   CK G++ EA       ++ G  PD ISY T+I 
Sbjct: 740 TAKDLYFAMLQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIH 799

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
            LC  GDI +A E    ML K V P+   +N++I      G+      I   M+  GV  
Sbjct: 800 ELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQP 859

Query: 435 NVFTFNALILAET 447
           N  T  AL +  +
Sbjct: 860 NWHTHRALFVGTS 872


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 191/405 (47%), Gaps = 6/405 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           +R L     +  A  L  +   +G  PDV     L+  LC+ G    A  V+R       
Sbjct: 42  LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
             +   YN  + GYCR   LD A  L ++M    + P+  T+  L+  LC +G +GDA+ 
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALS 158

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L ++L  +       V+T T+L+++  K+    QA+ + ++M  K    +IV YNV+IN
Sbjct: 159 LLDDMLRRE---CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIIN 215

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C    +  A     ++   GF PD ++Y T+L  LC   + ++    +  + +    P
Sbjct: 216 GMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVP 275

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           +++++  +++  C  G + +A E L  M E        + N++I+   + G + +AF   
Sbjct: 276 NEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFL 335

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           + M S+G S +  ++  ++    R G   DA  L  EM+     P+  T+N  I   C  
Sbjct: 336 NNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQK 395

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           G I  A+ L ++M   G +  I+TY  L+ G C +G +  A E+F
Sbjct: 396 GLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELF 440



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 221/474 (46%), Gaps = 14/474 (2%)

Query: 75  KDSDNEGNPQAVFNALDLILK----ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCL 130
           + ++  G P  VF    L+        LD  + +  + PV      D   +  +IR LC 
Sbjct: 94  RTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPV----PPDAYTYTPLIRGLCD 149

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G++G AL L   M+++   P V+T+  L+  +CK     +A  V+ EM     +PN  T
Sbjct: 150 RGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVT 209

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I G CR + +D A  + + +++ G +P+ V++  ++  LC      D      E++
Sbjct: 210 YNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMV 269

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
            ++      + +T  +L+  + + G   +A+ + + M +     +    N++IN  C  G
Sbjct: 270 ENN---CVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQG 326

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  AF +   M   G  PD I+Y T+L  LC+ G+ ++A      + +    P+++++ 
Sbjct: 327 RVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFN 386

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T I  LC  G I +A   +  M E         +N +++G+   G + +A    +L  S 
Sbjct: 387 TFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSAL---ELFNSL 443

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
               N  T+  L+        +  A  L  EM+ +    +V T+N+L+   C  G +  A
Sbjct: 444 PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEA 503

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           ++L  +M+  G TP++IT+  L+ G     N +EA E+   + + G+++D I +
Sbjct: 504 IELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITY 557



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 201/459 (43%), Gaps = 44/459 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR+LC  G+   A  + R     G   DV  +N LV   C+ G L+ A  +I   + M 
Sbjct: 76  LIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLI---ASMP 132

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY   I G C    +  AL L   M     +P+ VT+ +L+ A+CK    G A+
Sbjct: 133 VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAM 192

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L E+ A      T +++T  ++++   +      A  + N +     Q D V+Y  ++
Sbjct: 193 KVLDEMRAKG---CTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVL 249

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITY----------------------------- 334
            G C           FC+M++   +P+ +T+                             
Sbjct: 250 KGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCT 309

Query: 335 ------NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
                 N ++N +CKQG++D+A  F   +   G +PD ISY T+++GLC  G    A+E 
Sbjct: 310 ANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKEL 369

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  M+ K+  P    +N  I    + G +  A  + + M  +G S  + T+NAL+     
Sbjct: 370 LNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCV 429

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +  A  L   +  +   P+  TY  L+   C+   +  A +L  EM++     +++T
Sbjct: 430 QGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVT 486

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +  L+   C +G ++EA E+  ++   G   + I F  L
Sbjct: 487 FNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTL 525



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 192/424 (45%), Gaps = 6/424 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            + D   +  V++ LC   +      L  +M++   VP+ +T + LV   C+ G +E+A 
Sbjct: 238 FQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAI 297

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V+  MSE   + N    N  I   C+   +D A    + M + G  P+ +++  ++  L
Sbjct: 298 EVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGL 357

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C+ G   DA + L E++  +      + +T    +    + G   QA+ L   M +    
Sbjct: 358 CRAGRWEDAKELLNEMVRKN---CPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCS 414

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             IV YN L+NGFC+ G + SA   F  +      P+ ITY TLL  LC   +LD A+  
Sbjct: 415 VGIVTYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAEL 471

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + +     + +++  ++   C  G + +A E +  M+E    P    +N ++DG   
Sbjct: 472 LAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITE 531

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             +   A  +   ++S G+S +  T+++++   +R   I +A  +   +   G+ P    
Sbjct: 532 DCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVM 591

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN ++ A C       A+  +  M+     P+  TY  LI+G    G +KEA  V +++ 
Sbjct: 592 YNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELC 651

Query: 534 TLGL 537
           + G+
Sbjct: 652 SRGV 655



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 164/336 (48%), Gaps = 8/336 (2%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D  + + + G   C+   D   +  V++ LC  G+   A  L  +M++K   P+ +T N 
Sbjct: 330 DAFEFLNNMGSYGCS--PDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNT 387

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
            +  LC+ G +++A  +I +M E   S    TYNA + G+C    +D AL LF+++    
Sbjct: 388 FICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP--- 444

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
             PN +T+  L+  LC    L  A + L E++ +D      +V+T  +L+  + + G   
Sbjct: 445 CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQND---CPLNVVTFNVLVSFFCQKGFVE 501

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A+ L   M +     +++ +N L++G   + +   A      ++ +G   D ITY++++
Sbjct: 502 EAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIV 561

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           + L ++ +++EA   +  +   G+ P  + Y  I+  LC   +  +A +F   M+  S +
Sbjct: 562 DVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCM 621

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           P    + ++I+G  R G L  A  +   + S GV S
Sbjct: 622 PNESTYVILIEGLAREGLLKEARYVLSELCSRGVLS 657



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 118/253 (46%), Gaps = 3/253 (1%)

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           D++ A     +   RG  PDV     L+  LC++G+  +A+        +G   D  +Y 
Sbjct: 50  DLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYN 109

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T++ G C +G +  AR  + SM    V P+ + +  +I G    G + +A S+ D ML  
Sbjct: 110 TLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRR 166

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
               +V T+  L+ A  +      A  +  EM   G  P++ TYN++I   C    +  A
Sbjct: 167 ECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDA 226

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
            Q+ + +   G  PD ++YT ++KG CA    ++ E +F ++       + + F +L + 
Sbjct: 227 RQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRF 286

Query: 551 YRRMKESDKARDI 563
           + R    ++A ++
Sbjct: 287 FCRGGMVERAIEV 299



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 133/312 (42%), Gaps = 3/312 (0%)

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DV   T L+ +  + G    A  +           D+ AYN L+ G+C  G + +A    
Sbjct: 69  DVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLI 128

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M      PD  TY  L+  LC +G++ +A      + +    P  ++Y  +++ +C  
Sbjct: 129 ASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKS 185

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
               +A + L  M  K   P    +NVII+G  R   + +A  I + + S+G   +  ++
Sbjct: 186 SGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSY 245

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
             ++          D   L  EM+ +   P+  T+++L+   C  G +  A+++ D M  
Sbjct: 246 TTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSE 305

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G T +      +I   C +G + +A E    + + G + D I +  + K   R    + 
Sbjct: 306 HGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWED 365

Query: 560 ARDIHQKWLLRN 571
           A+++  + + +N
Sbjct: 366 AKELLNEMVRKN 377


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 219/449 (48%), Gaps = 7/449 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            + D   +  VI DL   GK+  AL L  +M ++G  PDV  +N L++   K  D + A 
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAM 239

Query: 174 HVI-REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
            +  R + +    PN  T+N  I+G  +   +D  L ++  M  N    +  T++ L+H 
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LC  G +  A     E+   D+ KA+ DV+T   ++  + + G   ++L LW  M  KN 
Sbjct: 300 LCDAGNVDKAESVFNEL---DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN- 355

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             +IV+YN+LI G   NG I  A   +  M  +G+  D  TY   ++ LC  G +++A  
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               +  +G   D  +Y +II  LC    + +A   +  M +  V    H+ N +I G  
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475

Query: 413 RCGDLSNA-FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
           R   L  A F +R+ M   G    V ++N LI    + G   +A +  KEML +G  PD+
Sbjct: 476 RDSRLGEASFFLRE-MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDL 534

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TY++L+   C    I LAL+L+ + L+ G+  D++ +  LI G C+ G + +A  V A 
Sbjct: 535 KTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMAN 594

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           ++      + + +  L + + ++ +S++A
Sbjct: 595 MEHRNCTANLVTYNTLMEGFFKVGDSNRA 623



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 148/284 (52%), Gaps = 3/284 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I  LC+ G +  AL + +++   G   DV  +  +++ LCK   LE+A ++++EMS+   
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGV 460

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
             N    NA I G  R + L +A      M  NG RP  V++NIL+  LCK G  G+A  
Sbjct: 461 ELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASA 520

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
           F+ E+L   +     D+ T +IL+    ++     AL LW+   Q  ++TD++ +N+LI+
Sbjct: 521 FVKEML---ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIH 577

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G C  G +  A      M  R    +++TYNTL+    K G  + A+  +G + K G+ P
Sbjct: 578 GLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQP 637

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           D ISY TI++GLC+   +  A EF        + P  + WN+++
Sbjct: 638 DIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 186/401 (46%), Gaps = 4/401 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   + ++I  LC  G +  A  +  ++ ++    DV+T+N ++   C+ G ++++  
Sbjct: 287 EKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLE 346

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           + R M E + S N  +YN  I G     ++D+A  ++  M   G   ++ T+ I +H LC
Sbjct: 347 LWRIM-EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLC 405

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G +  A+  + EV   +      DV     ++D   K     +A  L  +M +  ++ 
Sbjct: 406 VNGYVNKALGVMQEV---ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVEL 462

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           +    N LI G   +  +  A  +  +M K G  P V++YN L+  LCK GK  EAS F 
Sbjct: 463 NSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFV 522

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + + G  PD  +Y  ++ GLC    I  A E     L+  +  +  + N++I G    
Sbjct: 523 KEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSV 582

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G L +A ++   M     ++N+ T+N L+    + G    A  +   M   G+ PD+ +Y
Sbjct: 583 GKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISY 642

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           N ++   C    +  A++ +D+    GI P + T+  L++ 
Sbjct: 643 NTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 188/435 (43%), Gaps = 38/435 (8%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P++ T+N L+   CK  + EKA   +  M +    P+  +Y+  I    +  +LD A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           L LF  M+  G+ P+   +NIL+    K+     A++    +L  +D     +V T  I+
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL--EDSSVYPNVKTHNIM 261

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +    K G     L +W  M Q   + D+  Y+ LI+G C  G++  A + F ++ +R  
Sbjct: 262 ISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKA 321

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             DV+TYNT+L   C+ GK+ E+   + ++     + + +SY  +I+GL  +G I +A  
Sbjct: 322 SIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATM 380

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF-------- 439
               M  K    +   + + I G    G ++ A  +   + S G   +V+ +        
Sbjct: 381 IWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLC 440

Query: 440 ---------------------------NALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
                                      NALI    R   + +A    +EM  +G  P V 
Sbjct: 441 KKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVV 500

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           +YN+LI   C  G    A     EML  G  PD+ TY+ L+ G C    +  A E++ + 
Sbjct: 501 SYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQF 560

Query: 533 QTLGLAIDHIPFRIL 547
              GL  D +   IL
Sbjct: 561 LQSGLETDVMMHNIL 575



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 152/307 (49%), Gaps = 11/307 (3%)

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGF 306
           E++   + K   DV  S I   +Y KN    QAL ++  M +    +  I +YN L+N F
Sbjct: 67  ELIRSQECKCDEDVALSVI--KTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124

Query: 307 CLNGD---ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
                   + S FAYF      G  P++ TYN L+   CK+ + ++A  F   + K G  
Sbjct: 125 VEAKQWVKVESLFAYF---ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK 181

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  SY T+I  L   G +  A E    M E+ V P+   +N++IDG+ +  D   A  +
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241

Query: 424 RDLMLS-FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
            D +L    V  NV T N +I   ++ G + D   + + M  +    D++TY+ LI   C
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           + G++  A  +++E+  R  + D++TY  ++ G C  G +KE+ E++ +I     +++ +
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIV 360

Query: 543 PFRILKK 549
            + IL K
Sbjct: 361 SYNILIK 367



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 60/123 (48%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LETD   H  +I  LC  GK+  A+ +   M  +    +++T+N L+    K+GD  +A 
Sbjct: 565 LETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRAT 624

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M +M   P+  +YN  + G C    +  A+  F    N+GI P   T NILV A+
Sbjct: 625 VIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684

Query: 234 CKK 236
             +
Sbjct: 685 VNR 687


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 220/433 (50%), Gaps = 13/433 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVP--------DVLTHNYLVNELCKIGDLEKADHV 175
           +I  LC  G++  A+ L R + ++            +V+ ++ +++ LC+ G +++    
Sbjct: 148 LINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEF 207

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
             EM      PN  TY + I G C V +  +   L   M   G+  +     +L+  LCK
Sbjct: 208 YNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCK 267

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G+L +A +   E++   +     +++T T LM  Y   G+   A  L++ + +   + D
Sbjct: 268 NGMLVEAREMFDEMV---NRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRD 324

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           +  YNV I+G+C  G +  A   F +M + G +P+++TYN+L++CLCK G++  A     
Sbjct: 325 VWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVK 384

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + ++G+ PD ++   ++ GLC    + +A      ++E  + P+   + ++I G     
Sbjct: 385 TMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSR 444

Query: 416 DLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
            +  A ++ RD+ L   +  ++ T++ LI    R G I +A+ L  EM + G  PD  TY
Sbjct: 445 RMGEAMNLLRDMHLK-NLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITY 503

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           ++L+ A     H+  A+ L+++M++RG+ PD++ YT +I G+C    + EA  +F ++  
Sbjct: 504 SILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHM 563

Query: 535 LGLAIDHIPFRIL 547
             L  D + + IL
Sbjct: 564 KNLVPDIVTYTIL 576



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 231/462 (50%), Gaps = 21/462 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            V++ LC+ G +  AL    +++  G   + +++  L+N LC+ G + +A +++R + + 
Sbjct: 112 TVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKE 171

Query: 183 RP--------SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +           N   Y+  I   CR   +D+    ++ M  NG+ PN  T+  L+  LC
Sbjct: 172 KEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLC 231

Query: 235 KKGLLGDAVKFL-GEVLADDDGKATSDV--ITSTILMDSYFKNGDKFQALALWNDMFQKN 291
             G      KFL G  L D+  +   DV     T+L+D   KNG   +A  ++++M  + 
Sbjct: 232 GVG------KFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRG 285

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
            + +IV    L+ G+CL G++  A   F  + + GF  DV TYN  ++  CK G++ +A 
Sbjct: 286 YEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAV 345

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
             +  + + GV P+ ++Y ++I  LC  G++  A E + +M    + P+     +++DG 
Sbjct: 346 RVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGL 405

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +   L  A  + + ++  G++ +V+++  LI        + +A +L ++M L  + P +
Sbjct: 406 CKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHI 465

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TY+ LI   C  G I  A +L +EM  +G  PD ITY+ L+     + ++ EA  +F +
Sbjct: 466 VTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQ 525

Query: 532 IQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLL 569
           +   GL  D + + I+   Y + +  D+A    R++H K L+
Sbjct: 526 MIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLV 567



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 163/339 (48%), Gaps = 5/339 (1%)

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV-- 249
           N  + G C    + KAL     + NNG   N V++ IL++ LC+ G + +AV  L  +  
Sbjct: 111 NTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEK 170

Query: 250 ---LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
                 D      +V+  +I++D   +NG   +    +N+M    +  +   Y  LI G 
Sbjct: 171 EKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGL 230

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C  G     F    +M++RG    V  +  L++ LCK G L EA   +  +   G  P+ 
Sbjct: 231 CGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNI 290

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           ++   ++ G C+ G++  ARE   ++ E     +   +NV I GY + G + +A  + D 
Sbjct: 291 VTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDE 350

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M   GV  N+ T+N+LI    + G +  A+ + K M   G+ PD+ T  +L+   C    
Sbjct: 351 MCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKR 410

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           +  A+ L+++++  G+TPD+ +YT LI G C    M EA
Sbjct: 411 LDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEA 449



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 169/358 (47%), Gaps = 3/358 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++IR LC  GK      L  +MI++G    V     L++ LCK G L +A  +  EM   
Sbjct: 225 SLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNR 284

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  T  A + GYC    +D A  LF  +   G + +  T+N+ +H  CK G + DA
Sbjct: 285 GYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDA 344

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V+   E+  +       +++T   L+D   K G+   A  +   M +  +  DIV   +L
Sbjct: 345 VRVFDEMCREG---VVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCIL 401

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G C +  +  A   F Q+++ G  PDV +Y  L++  C   ++ EA +    +    +
Sbjct: 402 LDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNL 461

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  ++Y  +I GLC  G I  A   L  M  K  +P+   +++++D   +   L  A  
Sbjct: 462 VPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVF 521

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           + + M+  G+  +V  +  +I    +   I +A +L +EM +  + PD+ TY +L  A
Sbjct: 522 LFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNA 579



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 155/310 (50%), Gaps = 11/310 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++   CL G +  A  L   + + G   DV T+N  ++  CK+G +  A  V  EM   
Sbjct: 295 ALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCRE 354

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN+ I   C+  E+  A  +  TM  +G+ P+ VT  IL+  LCK   L  A
Sbjct: 355 GVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQA 414

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    +++   +   T DV + TIL+     +    +A+ L  DM  KN+   IV Y+ L
Sbjct: 415 ILLFNQLV---ESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCL 471

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C +G IS+A+    +M  +G LPD ITY+ LL+ L K+  LDEA   +  + K G+
Sbjct: 472 IDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGL 531

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD + Y  +I G C    I +A      M  K++VP+   + ++ +   + G  SN++ 
Sbjct: 532 EPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSG--SNSYE 589

Query: 423 ------IRDL 426
                 IRD+
Sbjct: 590 WKFVNVIRDI 599



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 193/412 (46%), Gaps = 9/412 (2%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  L+        +I  LC  G +  A  +  +M+ +G  P+++T   L+   C  G++
Sbjct: 247 IRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNV 306

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           + A  +   + E     +  TYN FI GYC+V  +  A+ +F  M   G+ PN VT+N L
Sbjct: 307 DMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSL 366

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LCK G +  A + +  +        T D++T  IL+D   K+    QA+ L+N + +
Sbjct: 367 IDCLCKAGEVSGAWEIVKTM---HRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVE 423

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             +  D+ +Y +LI+G C +  +  A      M  +  +P ++TY+ L++ LC+ G++  
Sbjct: 424 SGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISN 483

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A      +   G  PD I+Y  ++  L     + +A      M+++ + P+   + ++ID
Sbjct: 484 AWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMID 543

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           GY +   +  A ++   M    +  ++ T+  L  A  + GS  +++  K   ++  I P
Sbjct: 544 GYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGS--NSYEWKFVNVIRDINP 601

Query: 470 D--VFTYNLLIGASCNLGHIHLALQL--YDEMLRRGITPDIITYTELIKGHC 517
              V  Y   +  S +L +  LA +   Y   L+  ++  I    E++  HC
Sbjct: 602 PPRVLKYLAALCKSEHLDYKCLASEFASYAGSLQTSVSQHIKATMEMMYMHC 653



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 149/333 (44%), Gaps = 43/333 (12%)

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           +F  G    + +++  + ++    D VA N ++ G C+NG +  A  +  +++  GF  +
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 331 VITYNTLLN-------------------------------------------CLCKQGKL 347
            ++Y  L+N                                           CLC+ G +
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           DE   FY  +   GV P++ +Y ++I+GLC  G  ++    +  M+ + +    +++ V+
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           IDG  + G L  A  + D M++ G   N+ T  AL+      G++  A  L   +   G 
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGF 321

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
             DV+TYN+ I   C +G +  A++++DEM R G+ P+I+TY  LI   C  G +  A E
Sbjct: 322 KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWE 381

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           +   +   GL  D +   IL     + K  D+A
Sbjct: 382 IVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQA 414


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 211/442 (47%), Gaps = 3/442 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK+  A+ +   M + G  P++L  N  ++ L     LEKA   +  M  +   PN  T
Sbjct: 131 AGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVT 190

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I GYC ++ ++ A+ L S M   G  P++V++  ++  LCK   + + +  + ++ 
Sbjct: 191 YNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKM- 249

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             +D K  +D +T   L+    K+    +AL    +  ++  Q D V Y+ +++ +C  G
Sbjct: 250 --EDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEG 307

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A     +M  RG +PDV+TY  ++N   + G++ +A      + K G  P+ +SY 
Sbjct: 308 RMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYT 367

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
             ++GLC  G+  +ARE + +  E+   P    ++V++ G+ R G LS+A  +   M+  
Sbjct: 368 AFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGK 427

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G        N L+ +  R G + +A    +E L  G   +   +  +I   C    I  A
Sbjct: 428 GFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAA 487

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L L D+M      PD +TYT +I     +G ++EA E+  K+   G+    + +R +  R
Sbjct: 488 LSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHR 547

Query: 551 YRRMKESDKARDIHQKWLLRNK 572
           Y ++   +   ++  K L R +
Sbjct: 548 YGQIGRVEDLLNLLDKMLTRQE 569



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/430 (23%), Positives = 196/430 (45%), Gaps = 5/430 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+  C   ++  A+ L  +M  KG  PD +++  ++  LCK   + +   VI +M + +
Sbjct: 194 LIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTK 253

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TYN  I   C+    D+AL         G + ++V ++ +V + CK+G +  A 
Sbjct: 254 LLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAK 313

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + + E+          DV+T T +++ + + G+  QA  +   M++   + + V+Y   +
Sbjct: 314 EIVNEMFTRG---CIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFL 370

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C  G+ S A        ++ + P+ ITY+ +++   ++GKL +A      +   G  
Sbjct: 371 KGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFF 430

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P  +    ++Q LC  G + +A++F+   L          +  +I  + +  D+  A S+
Sbjct: 431 PTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSL 490

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M       +  T+  +I A  + G I +A  L  +ML  GI P   TY  +I     
Sbjct: 491 LDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQ 550

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           +G +   L L D+ML R        + ++I+  C  GN++ A+++  K+      ID   
Sbjct: 551 IGRVEDLLNLLDKMLTRQECR--TAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANT 608

Query: 544 FRILKKRYRR 553
             +L + Y R
Sbjct: 609 CHVLMESYLR 618



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 201/448 (44%), Gaps = 10/448 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E +D ++ M DT      L  D   +  +I  LC       AL   R+  ++G   D 
Sbjct: 239 IREVMDVIEKMEDT-----KLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDK 293

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           + ++ +V+  CK G +++A  ++ EM      P+  TY A I G+ +  E+ +A  +   
Sbjct: 294 VGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQ 353

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  +G +PN V++   +  LC+KG   +A + +    A ++   T + IT +++M  + +
Sbjct: 354 MYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMK---ASEEQWWTPNAITYSVVMHGFRR 410

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G    A  +  +M  K      V  N+L+   C  G +  A  +  + L  G   + + 
Sbjct: 411 EGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVN 470

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           + T+++  C+Q  ++ A      +  +   PD ++Y TII  L   G I +A E  L ML
Sbjct: 471 FTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKML 530

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           +K + P P  +  +I  YG+ G + +  ++ D ML+         FN +I      G++ 
Sbjct: 531 KKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRT--AFNQVIEKLCTFGNLE 588

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A  L  ++L      D  T ++L+ +    G    A ++   M  R + PD+    ++ 
Sbjct: 589 AADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVC 648

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           K     G  +EA+ +F +    G    H
Sbjct: 649 KKLMQEGKSEEADNLFLRFVERGNISSH 676



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 167/384 (43%), Gaps = 7/384 (1%)

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG--E 248
           +   +  Y R  +L  A+ + + M   GI PN +  N  +H L    +L  A++FL   +
Sbjct: 121 FCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQ 180

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +L         +V+T   L+  Y        A+ L ++M  K    D V+Y  ++   C 
Sbjct: 181 LLG-----IMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCK 235

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           N  I        +M     L D +TYNTL++ LCK    DEA  F     K G   D++ 
Sbjct: 236 NRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVG 295

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  I+   C  G + +A+E +  M  +  +P+   +  II+G+ + G++  A  +   M 
Sbjct: 296 YSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMY 355

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G   N  ++ A +    + G+  +A  + K        P+  TY++++      G + 
Sbjct: 356 KHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLS 415

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A  +  EM+ +G  P  +    L++  C  G + EA++   +   +G A++ + F  + 
Sbjct: 416 DACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVI 475

Query: 549 KRYRRMKESDKARDIHQKWLLRNK 572
            R+ +  + + A  +     L NK
Sbjct: 476 HRFCQQDDIEAALSLLDDMYLSNK 499



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 101/435 (23%), Positives = 195/435 (44%), Gaps = 8/435 (1%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC   +I   + +  KM     + D +T+N L++ LCK    ++A   +RE  +     +
Sbjct: 233 LCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVD 292

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
              Y+A +  YC+   +D+A  + + M   G  P+ VT+  +++   + G +G A K L 
Sbjct: 293 KVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQ 352

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           ++          + ++ T  +    + G+  +A  +     ++    + + Y+V+++GF 
Sbjct: 353 QMYKHG---CKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFR 409

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G +S A     +M+ +GF P  +  N LL  LC+ G++DEA  F       G A + +
Sbjct: 410 REGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAV 469

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           ++ T+I   C   DI  A   L  M   +  P+   +  IID  G+ G +  A  +   M
Sbjct: 470 NFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKM 529

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           L  G+     T+  +I    + G + D  +L  +ML        F  N +I   C  G++
Sbjct: 530 LKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRTAF--NQVIEKLCTFGNL 587

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A +L  ++LR     D  T   L++ +  +G    A +V  ++ +  L  D    ++ 
Sbjct: 588 EAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPD---LKLC 644

Query: 548 KKRYRRMKESDKARD 562
           +K  +++ +  K+ +
Sbjct: 645 EKVCKKLMQEGKSEE 659



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 74/160 (46%)

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
           P  +  ++  Y R G L NA  +  +M   G+  N+   N  I        +  A    +
Sbjct: 118 PQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLE 177

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            M L GI P+V TYN LI   C+L  +  A++L  EM  +G +PD ++Y  ++   C   
Sbjct: 178 RMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNR 237

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            ++E  +V  K++   L  D + +  L     + + +D+A
Sbjct: 238 RIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEA 277



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 94/241 (39%)

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           D I Y  +L+ L K      A     ++ + G+      +  ++      G +  A + L
Sbjct: 82  DPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVL 141

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M +  + P   + N  I        L  A    + M   G+  NV T+N LI      
Sbjct: 142 TMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDL 201

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             + DA  L  EM L G  PD  +Y  ++G  C    I   + + ++M    +  D +TY
Sbjct: 202 HRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTY 261

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
             LI   C   +  EA +   + Q  G  +D + +  +   Y +    D+A++I  +   
Sbjct: 262 NTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFT 321

Query: 570 R 570
           R
Sbjct: 322 R 322


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 204/431 (47%), Gaps = 29/431 (6%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTV----PDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           I  LC  GK+  A  + R M     +    P+V+T N ++   CK G +  A  ++  M 
Sbjct: 261 ISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMK 320

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           ++    +   YN ++ G  R  EL +A  +   M   GI PN  T+NI++  LC+  +L 
Sbjct: 321 KVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLS 380

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA   +  ++ +       D +  + L+  Y   G  F+A ++ ++M +   Q +    N
Sbjct: 381 DARGLMDLMMRNG---VYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCN 437

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L++     G    A     +M ++ + PD +T N ++N LC+ G+LD+AS     +   
Sbjct: 438 TLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTN 497

Query: 361 GVA----------------------PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           G                        PD I+Y T+I GLC  G + +A++  + ML K++ 
Sbjct: 498 GPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLR 557

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P+   ++  I  + + G +S+AF +   M   G S  + T+NALIL       IF+ + L
Sbjct: 558 PDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGL 617

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
           K EM   GI PD+ TYN +I   C  G    A+ L  EML +GI+P++ ++  LIK    
Sbjct: 618 KDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSK 677

Query: 519 RGNMKEAEEVF 529
             + K A E+F
Sbjct: 678 SSDFKVACELF 688



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 194/431 (45%), Gaps = 32/431 (7%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++  C  G +G A  L   M + G    +  +N  +  L + G+L +A  V+ EM    
Sbjct: 299 MLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKG 358

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYN  + G CR + L  A  L   M  NG+ P+ V ++ L+H  C +G + +A 
Sbjct: 359 IEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAK 418

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E++ +       +  T   L+ S +K G   +A  +   M +K  Q D V  N+++
Sbjct: 419 SVLHEMIRNG---CQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVV 475

Query: 304 NGFCLNGDISSAFAYFCQMLKRG----------------------FLPDVITYNTLLNCL 341
           NG C NG++  A     +M   G                       LPD ITY TL+N L
Sbjct: 476 NGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGL 535

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK G+L+EA   +  +    + PD ++Y T I   C  G I  A   L  M         
Sbjct: 536 CKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTL 595

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +N +I G G    +   + ++D M   G+S ++ T+N +I     GG   DA SL  E
Sbjct: 596 QTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHE 655

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR---RGITPDIITYTELIKGHCA 518
           ML  GI P+V ++ +LI A        +A +L++  L    R      + + EL+ G   
Sbjct: 656 MLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEALYSLMFNELLAG--- 712

Query: 519 RGNMKEAEEVF 529
            G + EA+E+F
Sbjct: 713 -GQLSEAKELF 722



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 210/440 (47%), Gaps = 29/440 (6%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM---SEMR-PSPNCATYNAFI 195
           L  +M + G +PDV+T N  ++ LC+ G + +A  + R+M   +E+  P PN  T+N  +
Sbjct: 241 LVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLML 300

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G+C+   +  A  L  TM   G   +   +NI +  L + G L +A   L E++A    
Sbjct: 301 KGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKG-- 358

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               +  T  I+MD   +N     A  L + M +  +  D VAY+ L++G+C  G +  A
Sbjct: 359 -IEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEA 417

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
            +   +M++ G  P+  T NTLL+ L K+G+  EA      +++    PD ++   ++ G
Sbjct: 418 KSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNG 477

Query: 376 LCIHGDIVKAREFLLSM-------LEK---------------SVVPEPHIWNVIIDGYGR 413
           LC +G++ KA E +  M       L+K               + +P+   +  +I+G  +
Sbjct: 478 LCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCK 537

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G L  A      ML+  +  +  T++  I +  + G I  AF + K+M  +G    + T
Sbjct: 538 VGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQT 597

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN LI    +   I     L DEM  +GI+PDI TY  +I   C  G  K+A  +  ++ 
Sbjct: 598 YNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEML 657

Query: 534 TLGLAIDHIPFRILKKRYRR 553
             G++ +   F+IL K + +
Sbjct: 658 DKGISPNVSSFKILIKAFSK 677



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 171/363 (47%), Gaps = 8/363 (2%)

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           +M   R +P   T+N  I   C     D AL LF  M   G  PN  T  ILV  LC+ G
Sbjct: 140 DMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAG 199

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
           L+  A+    E++ +++    ++ +    L+  + +     +A  L   M +  +  D+V
Sbjct: 200 LVKQAL----ELVNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVV 255

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFL----PDVITYNTLLNCLCKQGKLDEASHF 353
            +N  I+  C  G +  A   F  M     L    P+V+T+N +L   CK G + +A   
Sbjct: 256 TFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGL 315

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + K G       Y   + GL  +G++++AR  L  M+ K + P  + +N+++DG  R
Sbjct: 316 VETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCR 375

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              LS+A  + DLM+  GV  +   ++ L+      G +F+A S+  EM+ +G  P+ +T
Sbjct: 376 NHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYT 435

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            N L+ +    G    A ++  +M  +   PD +T   ++ G C  G + +A E+ +++ 
Sbjct: 436 CNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMW 495

Query: 534 TLG 536
           T G
Sbjct: 496 TNG 498



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 192/438 (43%), Gaps = 34/438 (7%)

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
           G   WL   M+     P   T N L++ LC+    + A  +  +M +    PN  T    
Sbjct: 132 GFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGIL 191

Query: 195 ITGYCRVNELDKALHLFSTMANNGIR-PNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
           + G CR   + +AL L +   NN  R  NRV +N LV   C++ +  +A + +  +   +
Sbjct: 192 VRGLCRAGLVKQALELVNN--NNSCRIANRVVYNTLVSRFCREEMNNEAERLVERM---N 246

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ-----TDIVAYNVLINGFCL 308
           +     DV+T    + +  + G   +A  ++ DM Q + +      ++V +N+++ GFC 
Sbjct: 247 ELGVLPDVVTFNSRISALCRAGKVMEASRIFRDM-QMDAELGLPRPNVVTFNLMLKGFCK 305

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           +G +  A      M K G    +  YN  L  L + G+L EA      +   G+ P+  +
Sbjct: 306 HGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYT 365

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  ++ GLC +  +  AR  +  M+   V P+   ++ ++ GY   G +  A S+   M+
Sbjct: 366 YNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMI 425

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G   N +T N L+ +  + G   +A  + ++M      PD  T N+++   C  G + 
Sbjct: 426 RNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELD 485

Query: 489 LALQLYDEMLRRGIT----------------------PDIITYTELIKGHCARGNMKEAE 526
            A ++  EM   G T                      PD ITYT LI G C  G ++EA+
Sbjct: 486 KASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAK 545

Query: 527 EVFAKIQTLGLAIDHIPF 544
           + F ++    L  D + +
Sbjct: 546 KKFIEMLAKNLRPDSVTY 563



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 4/281 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  G++  A     +M+ K   PD +T++  +   CK G +  A  V+++M 
Sbjct: 528 YTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDME 587

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               S    TYNA I G    N++ +   L   M   GI P+  T+N ++  LC+ G   
Sbjct: 588 RNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAK 647

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA+  L E+L   D   + +V +  IL+ ++ K+ D   A  L+        + + + Y+
Sbjct: 648 DAISLLHEML---DKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEAL-YS 703

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           ++ N     G +S A   F   L R        Y  L+  LC+  +L +A+     L   
Sbjct: 704 LMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDK 763

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           G   D  S+  +I GL   G+  +A E    M+E  +   P
Sbjct: 764 GYGFDHASFMPVIDGLSKRGNKRQADELAKRMMELELEDRP 804


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 208/415 (50%), Gaps = 9/415 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   +I   L     ++++G +PDV+T   L+  LC    + +A  +   M ++ 
Sbjct: 132 LINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLG 191

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANN------GIRPNRVTHNILVHALCKKG 237
            +PN  TY   I G C +  ++ AL     M N+        RPN ++++I++  LCK G
Sbjct: 192 CTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVG 251

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
              +A+    E++   D     +V+T ++L+D   K G   +A  L   M Q  I  ++ 
Sbjct: 252 NWEEAICLFNEMV---DQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLF 308

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            Y  LI GFCL GD++SA   F  M  +G+ PDVI+YN L+N  CK  K++EA   +  +
Sbjct: 309 TYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEM 368

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
              G+ PD  +   +++ L + G +  A+E    +   ++  +  I  + +DG  + G +
Sbjct: 369 LHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYI 428

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             A  + + + S+ +  ++ TF  LI    + G +  A+ L +++  +GI PD   Y+ +
Sbjct: 429 FEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSM 488

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           I   C  G +  A  L+ +M   G +PD+ITY+ L++G      +++  ++  ++
Sbjct: 489 IHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRM 543



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 206/429 (48%), Gaps = 6/429 (1%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L ++M   G  PD+LT N L+N LC +  + +    +  +      P+  T+   I G C
Sbjct: 113 LYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLC 172

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG---K 256
             + + +A  LF  M   G  PN VT+  L+  LC  G +  A+K+  E+L D       
Sbjct: 173 VEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFN 232

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              +VI+ +I++D   K G+  +A+ L+N+M  + +Q ++V ++VLI+  C  G +  A 
Sbjct: 233 CRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAK 292

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
                M++ G +P++ TY +L+   C  G L+ A   +  +   G  PD ISY  +I G 
Sbjct: 293 KLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGY 352

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C    + +A +    ML   + P+     V++      G + +A  +  ++  + +  ++
Sbjct: 353 CKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDL 412

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
                 +    + G IF+A  L  E+    +  D+ T+  LI   C  G +  A +L+++
Sbjct: 413 CICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEK 472

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           +   GI PD + Y+ +I G C +G + +A  +F K++  G + D I + IL    R   E
Sbjct: 473 LYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSIL---MRGFYE 529

Query: 557 SDKARDIHQ 565
           S+K   + Q
Sbjct: 530 SNKLEKVVQ 538



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 194/395 (49%), Gaps = 9/395 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D      +I+ LC+  +I  A  L  +M + G  P+V+T+  L+  LC +G++  A    
Sbjct: 160 DVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWH 219

Query: 177 REM-SEMRP-----SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +EM ++  P      PN  +Y+  I G C+V   ++A+ LF+ M + G++PN VT ++L+
Sbjct: 220 QEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLI 279

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LCK+G +  A K L  ++         ++ T T L+  +   GD   A  L+  M  K
Sbjct: 280 DMLCKEGQVIKAKKLLEMMIQIG---IVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSK 336

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             + D+++YN+LING+C    +  A   F +ML  G  PDV T   LL  L   GK+D+A
Sbjct: 337 GYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDA 396

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              + V+    +  D       + GLC +G I +A +    +   ++  +   +  +IDG
Sbjct: 397 KELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDG 456

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             + G L  A+ + + +   G+  +   ++++I    + G +  A  L ++M  +G  PD
Sbjct: 457 LCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPD 516

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
           + TY++L+        +   +QL   M+ + + PD
Sbjct: 517 LITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPD 551



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 171/340 (50%), Gaps = 32/340 (9%)

Query: 102 KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           + + DT P       +   +  +I  LC  G    A+ L  +M+ +G  P+V+T + L++
Sbjct: 221 EMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLID 280

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP 221
            LCK G + KA  ++  M ++   PN  TY + I G+C V +L+ A  LF +M + G  P
Sbjct: 281 MLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEP 340

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVL----------------------ADDDGKA-- 257
           + +++N+L++  CK   + +A+K   E+L                        DD K   
Sbjct: 341 DVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELF 400

Query: 258 --------TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
                     D+    I +D   KNG  F+A+ L+N++   N++ DI  +  LI+G C  
Sbjct: 401 RVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKA 460

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G + +A+  F ++ + G  PD + Y+++++  CK+G++D+A+  +  + + G +PD I+Y
Sbjct: 461 GKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITY 520

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
             +++G      + K  + L  M+EK V P+  I+ ++ D
Sbjct: 521 SILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVED 560



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 157/294 (53%), Gaps = 12/294 (4%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           Q  +L+  M    +  D++  N+LIN  C    I+   A    +++RG++PDV+T+ TL+
Sbjct: 109 QVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLI 168

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             LC + ++ EA+  +  + K G  P+ ++Y T+I+GLC  G+I  A ++   ML  +  
Sbjct: 169 KGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDT-- 226

Query: 399 PEPHIWN---------VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             P+++N         +IIDG  + G+   A  + + M+  GV  NV TF+ LI    + 
Sbjct: 227 -SPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKE 285

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G +  A  L + M+  GI P++FTY  LI   C +G ++ A +L+  M  +G  PD+I+Y
Sbjct: 286 GQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISY 345

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
             LI G+C    ++EA ++F ++  +G+  D     +L K      + D A+++
Sbjct: 346 NMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKEL 399



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 190/418 (45%), Gaps = 44/418 (10%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           ++N  + G  ++    +   L+  M   G+ P+ +T NIL++ LC    + + +  +  +
Sbjct: 93  SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +         DV+T T L+          +A  L+  M +     ++V Y  LI G C  
Sbjct: 153 MRRG---YIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209

Query: 310 GDISSAFAYFCQMLKR------GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           G+I+ A  +  +ML           P+VI+Y+ +++ LCK G  +EA   +  +   GV 
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ +++  +I  LC  G ++KA++ L  M++  +VP    +  +I G+   GDL++A  +
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA--- 480
              M S G   +V ++N LI    +   + +A  L  EML  G++PDV T  +L+ A   
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFL 389

Query: 481 --------------------------------SCNLGHIHLALQLYDEMLRRGITPDIIT 508
                                            C  G+I  A++L++E+    +  DI T
Sbjct: 390 AGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIET 449

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +  LI G C  G ++ A E+F K+   G+  D + +  +   + +  + DKA  + QK
Sbjct: 450 FGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQK 507



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 143/280 (51%), Gaps = 6/280 (2%)

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
            I ++N L+ G       S  F+ + QM   G  PD++T N L+NCLC   +++E     
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + + G  PD +++ T+I+GLC+   I++A +  + M +    P    +  +I G    
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209

Query: 415 GDLSNAFSIRDLMLS------FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           G+++ A      ML+      F    NV +++ +I    + G+  +A  L  EM+  G+ 
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P+V T+++LI   C  G +  A +L + M++ GI P++ TYT LIKG C  G++  A+E+
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           F  + + G   D I + +L   Y +  + ++A  +  + L
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEML 369



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 5/153 (3%)

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            ++ A    DLM+      ++F+FN L+    +       FSL K+M L G++PD+ T N
Sbjct: 76  SVTQAHQFFDLMMR-----SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLN 130

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           +LI   CN+  I+  L     ++RRG  PD++T+T LIKG C    + EA ++F ++Q L
Sbjct: 131 ILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKL 190

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G   + + +  L K    +   + A   HQ+ L
Sbjct: 191 GCTPNVVTYGTLIKGLCALGNINIALKWHQEML 223



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 67/294 (22%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC  G++  A  L   MIQ G VP++ T+  L+   C +GDL  A  +   M   
Sbjct: 277 VLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSK 336

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL--------- 233
              P+  +YN  I GYC+  ++++A+ LF+ M + G+ P+  T  +L+ AL         
Sbjct: 337 GYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDA 396

Query: 234 --------------------------CKKGLLGDAVKFLGEV--------------LADD 253
                                     CK G + +A+K   E+              L D 
Sbjct: 397 KELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDG 456

Query: 254 DGKA------------------TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
             KA                    D +  + ++  + K G   +A  L+  M +     D
Sbjct: 457 LCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPD 516

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           ++ Y++L+ GF  +  +        +M+++   PD   Y  + + +CK  K  E
Sbjct: 517 LITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKE 570



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 65/122 (53%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D      +I  LC  GK+ TA  L  K+ ++G  PD + ++ +++  CK G ++KA+
Sbjct: 443 MKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKAN 502

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + ++M E   SP+  TY+  + G+   N+L+K + L   M    + P+   + I+   +
Sbjct: 503 ILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMV 562

Query: 234 CK 235
           CK
Sbjct: 563 CK 564


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 215/449 (47%), Gaps = 16/449 (3%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           LD  + + D  PV   L + Y  +  ++  LC+ G++  AL L   M+ +G  PDV+T+N
Sbjct: 136 LDEARRVVDGMPV---LPSAYA-YNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYN 191

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            L+   CK     +A  +I  M     +P   TYN  + G CR  ++D A  L +++ + 
Sbjct: 192 ILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSY 251

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD--DGKATSDVITSTILMDSYFKNG 275
           G  PN V +N ++  L   G   D  + + E+ +++    +AT  V+ S++  +  F+  
Sbjct: 252 GCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQ-- 309

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
              +A+ L   M + +   +IV YN +++G C  G +  A      M   G  P++ TYN
Sbjct: 310 ---RAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYN 366

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            L+  LC   + ++A      +S+T   PD +++ TII  LC  G  ++A E    M EK
Sbjct: 367 ILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEK 426

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE--TRGGSIF 453
              P    ++ +I+G  + G +  +  + + M S G +  +   N  +LAE       + 
Sbjct: 427 GCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEI---NYHLLAECLNEEDKLV 483

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  +  ++   GI P    YN ++   C  G    A+ +   M+  G  PD  TY+ LI
Sbjct: 484 EAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILI 543

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           +G    G MKEA E+ + + +  + +D++
Sbjct: 544 QGLAHEGYMKEARELLSTLSSRDVIVDNL 572



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 175/386 (45%), Gaps = 9/386 (2%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PDV   N LV +LC+ G    A  V+        +    TY+A   GYCRV  LD+A  +
Sbjct: 86  PDVALANRLVRDLCRRGRPADAARVVEACGS---AATAVTYSALADGYCRVGRLDEARRV 142

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M    + P+   +N L+HALC +G + DA+  L  +L         DV+T  IL+++
Sbjct: 143 VDGMP---VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYR---GCAPDVVTYNILLEA 196

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K     QA+ L + M  +      V YNV+++G C  GD+  A      +   G  P+
Sbjct: 197 ACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPN 256

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            + YNT+L  L   G+ ++       +      P + +   +I  LC  G   +A   L 
Sbjct: 257 TVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLE 316

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M +         +N ++ G    G +  A  +   M + G   N+FT+N L+       
Sbjct: 317 KMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAE 376

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
              DA  L  +M      PD+ T+N +IG  C  G    A++++ +M  +G  P+ +TY+
Sbjct: 377 RWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYS 436

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLG 536
            +I+G    G M+++ E+  ++ + G
Sbjct: 437 SVIEGLAKTGKMEQSLELLNEMGSKG 462



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 151/345 (43%), Gaps = 12/345 (3%)

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           ELD AL +  +   +   P+    N LV  LC++G   DA + +      +   + +  +
Sbjct: 71  ELDAALRVVES---SLCPPDVALANRLVRDLCRRGRPADAARVV------EACGSAATAV 121

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T + L D Y + G   +A  + + M    +     AYN L++  C+ G +  A      M
Sbjct: 122 TYSALADGYCRVGRLDEARRVVDGM---PVLPSAYAYNPLMHALCVRGQVRDALVLLDNM 178

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L RG  PDV+TYN LL   CK     +A     ++   G  P  ++Y  I+ G+C  GD+
Sbjct: 179 LYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDV 238

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             ARE L S+      P    +N ++ G    G   +   +   M S     +  T + +
Sbjct: 239 DYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVV 298

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I +  + G    A  L ++M       ++ TYN ++   C  GH+  AL L   M   G 
Sbjct: 299 ISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGC 358

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            P+I TY  L+KG C     ++AE++ AK+       D + F  +
Sbjct: 359 KPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTI 403



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 141/316 (44%), Gaps = 37/316 (11%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V++ L   G+      L  +M  +   P   T + +++ LC+ G  ++A  ++ +MS+  
Sbjct: 263 VLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHD 322

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            + N  TYNA ++G C    +D AL+L S M  +G +PN  T+NILV  LC      DA 
Sbjct: 323 CTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAE 382

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             + ++   D      D++T   ++    + G   QA+ ++  M +K    + V Y+ +I
Sbjct: 383 DLMAKMSQTD---CLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVI 439

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDV-------------------------------- 331
            G    G +  +     +M  +GF P++                                
Sbjct: 440 EGLAKTGKMEQSLELLNEMGSKGFNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGISP 499

Query: 332 --ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
             + YNT+L  LC+ GK D+A      +   G  PD+ +Y  +IQGL   G + +ARE L
Sbjct: 500 QAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELL 559

Query: 390 LSMLEKSVVPEPHIWN 405
            ++  + V+ +  I N
Sbjct: 560 STLSSRDVIVDNLIKN 575



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 3/270 (1%)

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y+ L +G+C  G +  A      M     LP    YN L++ LC +G++ +A      
Sbjct: 121 VTYSALADGYCRVGRLDEARRVVDGM---PVLPSAYAYNPLMHALCVRGQVRDALVLLDN 177

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G APD ++Y  +++  C      +A E +  M  +   P    +NVI+DG  R GD
Sbjct: 178 MLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGD 237

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A  + + + S+G + N   +N ++      G   D   L  EM  +   P   T ++
Sbjct: 238 VDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSV 297

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           +I + C  G    A++L ++M +   T +I+TY  ++ G C +G++  A  + + +QT G
Sbjct: 298 VISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDG 357

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQK 566
              +   + IL K     +  + A D+  K
Sbjct: 358 CKPNIFTYNILVKGLCNAERWEDAEDLMAK 387


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 210/460 (45%), Gaps = 18/460 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AV + L   G I  AL L  +M+  G +P+  T+  L++ LCK G    A  +  EM E 
Sbjct: 184 AVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLER 243

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   Y   ++  C    ++ A  L  +M  NG  P+ VT+ + +  LCK G + +A
Sbjct: 244 GIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEA 303

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+L   DG  T  +I  + L+D  F+ G   + L+ + +M  K+I  DI  Y +L
Sbjct: 304 FHRF-ELL--QDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTIL 360

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I  F   G    AF    +M  +GF+PD   YNTLL  L   G +D A      + +  V
Sbjct: 361 IRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNV 420

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D  ++  +I GLC  G I KA +    M E    P    +N +IDG  R G L  A  
Sbjct: 421 VLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARM 480

Query: 423 I---------RDLMLSFGVSSNVF----TFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           +           L L   + +N      +   L+    + G +  A+ L + ++  G+ P
Sbjct: 481 LFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVP 540

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           DV TYN LI   C   ++  AL+L+ E+  +GI+PD ITY  LI G        +A  +F
Sbjct: 541 DVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLF 600

Query: 530 AKIQTLGLAIDHIP-FRILKKRYRRMKESDKARDIHQKWL 568
             I   G     +P +  + +   RMK+  +A ++   +L
Sbjct: 601 QNILRSG-GFPSLPIYNTMMRSLCRMKKLSQAINLWLDYL 639



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 170/350 (48%), Gaps = 4/350 (1%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P+P+ A + A +  +       +A+  FS M +   RP    +N +   L  +G++  A+
Sbjct: 141 PAPS-AAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLAL 199

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
                +++        +  T  +LMD   K G    AL ++++M ++ I  D+  Y VL+
Sbjct: 200 ALYNRMVSSG---CLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLL 256

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G I  A    C M + G  PD +TY   L+ LCK G++DEA H + +L   G  
Sbjct: 257 SSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFT 316

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
              I Y  +I GL   G   +   +   ML KS+ P+  ++ ++I  +   G   +AF +
Sbjct: 317 LGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLL 376

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M   G   + F +N L+ A    G+I  A SL  EML + +  D  T+N++I   C 
Sbjct: 377 LDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCK 436

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            G I  A+Q++DEM   G  P ++TY  LI G    G ++EA  +F K++
Sbjct: 437 KGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKME 486



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 203/437 (46%), Gaps = 27/437 (6%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           ++ ++  LC  G    AL +  +M+++G VPDV  +  L++ LC  G +E A  ++  M 
Sbjct: 217 YIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMK 276

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    P+  TY  F++G C+   +D+A H F  + + G     + ++ L+  L + G   
Sbjct: 277 ENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFD 336

Query: 241 DAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           + + +  E+L    GK+ S D+   TIL+  + + G    A  L ++M  K    D   Y
Sbjct: 337 EGLSYYTEML----GKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCY 392

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N L+      G+I  A +   +ML+   + D  T+N ++  LCK+G +D+A   +  + +
Sbjct: 393 NTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGE 452

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKARE-------------FLLSMLEKSVVPEPHIWNV 406
            G  P  ++Y  +I GL   G + +AR              FL   L  + V +      
Sbjct: 453 HGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRK 512

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           ++DG  + G +  A+ +   ++  GV  +V T+N LI    +  ++  A  L KE+ L G
Sbjct: 513 LVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKG 572

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           I PD  TY  LI         + A  L+  +LR G  P +  Y  +++  C    MK+  
Sbjct: 573 ISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLC---RMKKLS 629

Query: 527 EVFAKIQTLGLAIDHIP 543
                 Q + L +D++P
Sbjct: 630 ------QAINLWLDYLP 640



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 183/397 (46%), Gaps = 16/397 (4%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D + +  ++  LC  G+I  A  L   M + G  PD +T+   ++ LCK G +++A H  
Sbjct: 248 DVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRF 307

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             + +   +     Y+  I G  +    D+ L  ++ M    I P+   + IL+    + 
Sbjct: 308 ELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEA 367

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G   DA   L E+    D     D      L+ + F  G+  +A +L ++M Q N+  D 
Sbjct: 368 GRTKDAFLLLDEM---KDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDS 424

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY-- 354
             +N++I G C  G I  A   F +M + G  P V+TYN L++ L + G L+EA   +  
Sbjct: 425 TTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHK 484

Query: 355 -------GVLSKTGVAPDQI----SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
                   +  +  +  +Q+    S + ++ G+C  G ++KA + L  ++E  VVP+   
Sbjct: 485 MEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVT 544

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N +I+G  +  +L  A  +   +   G+S +  T+  LI    R     DA  L + +L
Sbjct: 545 YNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNIL 604

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
             G FP +  YN ++ + C +  +  A+ L+ + L +
Sbjct: 605 RSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPK 641



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 143/303 (47%), Gaps = 12/303 (3%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           ++  D   +  +IR     G+   A  L  +M  KG VPD   +N L+  L  +G++++A
Sbjct: 349 SISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRA 408

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             ++ EM +     +  T+N  I G C+   +DKA+ +F  M  +G  P  +T+N L+  
Sbjct: 409 QSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDG 468

Query: 233 LCKKGLLGDAVKFLGEVLADDD----------GKATSDVITSTILMDSYFKNGDKFQALA 282
           L + G+L +A     ++   ++               D  +   L+D   ++G   +A  
Sbjct: 469 LYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYK 528

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           L   + +  +  D+V YN LING C   ++  A   F ++  +G  PD ITY TL++ L 
Sbjct: 529 LLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLW 588

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK--SVVPE 400
           +  + ++A+  +  + ++G  P    Y T+++ LC    + +A    L  L K  ++ PE
Sbjct: 589 RAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPE 648

Query: 401 PHI 403
             +
Sbjct: 649 DEV 651



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 119/273 (43%)

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +A+  ++ M   + +     YN +       G I  A A + +M+  G LP+  TY
Sbjct: 158 GRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTY 217

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
             L++ LCK+G   +A   +  + + G+ PD   Y  ++  LC  G I  A   L SM E
Sbjct: 218 IVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKE 277

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
               P+   + V + G  + G +  AF   +L+   G +  +  ++ LI    + G   +
Sbjct: 278 NGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDE 337

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
             S   EML   I PD+  Y +LI      G    A  L DEM  +G  PD   Y  L+K
Sbjct: 338 GLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLK 397

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
                GN+  A+ + +++    + +D     I+
Sbjct: 398 ALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIM 430



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 122/295 (41%), Gaps = 5/295 (1%)

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
           F ALA   D     +     A+  L+      G    A   F +M      P    YN +
Sbjct: 129 FDALA---DARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAV 185

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
              L  +G +  A   Y  +  +G  P+  +Y  ++ GLC  G  V A +    MLE+ +
Sbjct: 186 FQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGI 245

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           VP+  I+ V++      G + +A  +   M   G   +  T+   +    + G + +AF 
Sbjct: 246 VPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFH 305

Query: 458 LKKEMLLDGIFP-DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            + E+L DG F   +  Y+ LI      G     L  Y EML + I+PDI  YT LI+  
Sbjct: 306 -RFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRF 364

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
              G  K+A  +  +++  G   D   +  L K    +   D+A+ +  + L  N
Sbjct: 365 AEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNN 419



 Score = 39.3 bits (90), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 49/236 (20%), Positives = 95/236 (40%), Gaps = 4/236 (1%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
           G +   +  D   +  +I  LC    +  AL L +++  KG  PD +T+  L++ L +  
Sbjct: 532 GIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAH 591

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
               A  + + +      P+   YN  +   CR+ +L +A++L+          +     
Sbjct: 592 RENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEV 651

Query: 228 ILVHALC-KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           I     C + G L + VK   E++  D    + +    TI +    +      AL +++ 
Sbjct: 652 IANARKCFEDGFLDETVK---ELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHI 708

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           + +  I        +LIN  C + ++++A       L + F+      N LL  LC
Sbjct: 709 LEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLSKRFIVSQPVGNRLLRSLC 764


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 188/379 (49%), Gaps = 3/379 (0%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+  L++ LCK  ++++A+ V+ EM E   SPN  T+++ I G+ +   LDKA      
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   GI PN VT+  L+    K      A++   ++L +  G   +  I  + L++   +
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCE--GVEVNKFIVDS-LVNGLRQ 496

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           NG   +A+AL+ D     +  D V Y  LI+G    GD+ +AF +  +++ R  LPD + 
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN  +NCLC  GK  EA      +   G+ PDQ +Y T+I   C  G+  KA + L  M 
Sbjct: 557 YNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
             S+ P    +N ++ G    G +  A  + + M+S G S +  T   ++ A ++   + 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
               + + M+  G+  D+  YN L+   C  G    A  + +EML  GI PD IT+  LI
Sbjct: 677 VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI 736

Query: 514 KGHCARGNMKEAEEVFAKI 532
            GHC   ++  A   +A++
Sbjct: 737 LGHCKSSHLDNAFATYAQM 755



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 201/428 (46%), Gaps = 5/428 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC    +  A  +  +M +K   P+V+T + ++N   K G L+KA    R M 
Sbjct: 382 YTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   +PN  TY   I G+ +    D AL ++  M   G+  N+   + LV+ L + G + 
Sbjct: 442 ERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIE 501

Query: 241 DAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           +A+        D  G   S D +  T L+D  FK GD   A     ++  +N+  D V Y
Sbjct: 502 EAMALF----KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           NV IN  C+ G    A +   +M   G  PD  TYNT++   C++G+  +A      +  
Sbjct: 558 NVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
           + + P+ I+Y T++ GL   G + KA+  L  M+     P       ++    +   L  
Sbjct: 618 SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDV 677

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
              I + M++ G+ +++  +N L+      G    A  + +EML  GI PD  T+N LI 
Sbjct: 678 ILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C   H+  A   Y +ML + I+P+I T+  L+ G  + G + EA  V  +++  GL  
Sbjct: 738 GHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEP 797

Query: 540 DHIPFRIL 547
           +++ + IL
Sbjct: 798 NNLTYDIL 805



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 198/437 (45%), Gaps = 3/437 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G    AL +  +M  +G   DV+ +N LV   C+ G ++ A  V+  M E  
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN ATY  FI  YCR   +++A  L+  M  NG+  + VT + LV  LC+ G   +A 
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+   D   A  + +T   L+DS  K G   + L+L  +M  + +  D+V Y  L+
Sbjct: 295 ALFREM---DKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +     G            L      + +TY  L++ LCK   +DEA      + +  ++
Sbjct: 352 DWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSIS 411

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ +++ ++I G    G + KA E+   M E+ + P    +  +IDG+ +      A  +
Sbjct: 412 PNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEV 471

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              ML  GV  N F  ++L+    + G I +A +L K+    G+  D   Y  LI     
Sbjct: 472 YHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFK 531

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A +   E++ R + PD + Y   I   C  G  KEA+ +  +++ +GL  D   
Sbjct: 532 AGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQST 591

Query: 544 FRILKKRYRRMKESDKA 560
           +  +   + R  E+ KA
Sbjct: 592 YNTMIVSHCRKGETAKA 608



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 193/417 (46%), Gaps = 5/417 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D+  +  +I  L   G + TA    ++++ +  +PD + +N  +N LC +G  ++A 
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAK 574

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM  M   P+ +TYN  I  +CR  E  KAL L   M  + I+PN +T+N LV  L
Sbjct: 575 SILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD-SYFKNGDKFQALALWNDMFQKNI 292
              G +  A   L E+++   G + S +    +L   S  +  D    +  W  M    +
Sbjct: 635 FGTGAVEKAKYLLNEMVS--AGFSPSSLTHRRVLQACSQSRRLDVILDIHEW--MMNAGL 690

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             DI  YN L+   C +G    A     +ML  G  PD IT+N L+   CK   LD A  
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            Y  +    ++P+  ++ T++ GL   G I +A   L+ M +  + P    +++++ G+G
Sbjct: 751 TYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHG 810

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +  +   A  +   M+  G    V T+NALI   T+ G +  A  L K+M   G+ P   
Sbjct: 811 KQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSC 870

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           TY++L+     + +     +   +M  +G +P   T + + +     G   +A+ + 
Sbjct: 871 TYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 197/429 (45%), Gaps = 4/429 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M ++G   D +T N L+  LC+ G ++ A  +      +  + +   +N  I GYCRV 
Sbjct: 125 EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIH-ALDVIGWNTLIAGYCRVG 183

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +   AL +   M   G+  + V +N LV   C+ G + DA + + +++   +     +V 
Sbjct: 184 DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQV-DAARGVLDMM--KEAGVDPNVA 240

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T T  +  Y +     +A  L+  M +  +  D+V  + L+ G C +G  S A+A F +M
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            K G +P+ +TY TL++ L K G+  E     G +   GV  D ++Y  ++  L   G  
Sbjct: 301 DKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKT 360

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            + ++ L   L  ++      + V+ID   +  ++  A  +   M    +S NV TF+++
Sbjct: 361 DEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    + G +  A   K+ M   GI P+V TY  LI           AL++Y +ML  G+
Sbjct: 421 INGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGV 480

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             +      L+ G    G ++EA  +F      GL++DH+ +  L     +  +   A  
Sbjct: 481 EVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK 540

Query: 563 IHQKWLLRN 571
             Q+ + RN
Sbjct: 541 FGQELMDRN 549



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 180/407 (44%), Gaps = 3/407 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GKI  A+ L +     G   D + +  L++ L K GD+  A    +E+ +    P+   Y
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N FI   C + +  +A  + + M N G++P++ T+N ++ + C+KG    A+K L E+  
Sbjct: 558 NVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKM 617

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                   ++IT   L+   F  G   +A  L N+M         + +  ++     +  
Sbjct: 618 SS---IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR 674

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +         M+  G   D+  YNTLL  LC  G   +A+     +  +G+APD I++  
Sbjct: 675 LDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNA 734

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G C    +  A      ML +++ P    +N ++ G    G +  A ++   M   G
Sbjct: 735 LILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSG 794

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N  T++ L+    +  +  +A  L  EM+  G  P V TYN LI      G +  A 
Sbjct: 795 LEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAK 854

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
           +L+ +M +RG+ P   TY  L+ G     N  E ++    ++  G +
Sbjct: 855 ELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFS 901



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 160/384 (41%), Gaps = 54/384 (14%)

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           RP+ + A+ NA +  +CR+  L  A+ L  +      RP  V +NIL+ AL         
Sbjct: 69  RPA-DPASLNALLYSHCRLRLLRPAIALLRSS-----RPTTVAYNILLAAL--------- 113

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                            D   A A+  +M ++ +  D V  N L
Sbjct: 114 --------------------------------SDHAHAPAVLAEMCKRGVPFDGVTVNTL 141

Query: 303 INGFCLNGDISSAFAYFCQMLKRG---FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           + G C NG + +A A    +  RG      DVI +NTL+   C+ G    A      ++ 
Sbjct: 142 LAGLCRNGQVDAAAA----LADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTA 197

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+  D + Y T++ G C  G +  AR  L  M E  V P    +   I  Y R   +  
Sbjct: 198 QGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEE 257

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AF + + M+  GV  +V T +AL+    R G   +A++L +EM   G  P+  TY  LI 
Sbjct: 258 AFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLID 317

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           +    G     L L  EM+ RG+  D++TYT L+     +G   E ++      +  L++
Sbjct: 318 SLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSL 377

Query: 540 DHIPFRILKKRYRRMKESDKARDI 563
           + + + +L     +    D+A  +
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQV 401


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 213/459 (46%), Gaps = 9/459 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +IR LC  G++G AL L   M+ +G  P V+T+  L+  +CK     +A  V+
Sbjct: 175 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVL 234

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM     +PN  TYN  I G CR   +D A    + +++ G +P+ V++  ++  LC  
Sbjct: 235 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 294

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
               D  +   E++   +     + +T  +L+  + + G   +A+ +   M       + 
Sbjct: 295 KRWEDVEELFAEMM---EKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 351

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
              N++IN  C  G +  AF +   M   G  PD I+Y T+L  LC+  + ++A      
Sbjct: 352 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 411

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + +    P+++++ T I  LC  G I +A   +  M E         +N +++G+   G 
Sbjct: 412 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 471

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           + +A    +L  S     N  T+  L+        +  A  L  EML     P+V T+N+
Sbjct: 472 VDSAL---ELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 528

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L+   C  G +  A++L ++M+  G TP++ITY  L+ G     N +EA E+   + + G
Sbjct: 529 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 588

Query: 537 LAIDHIPFRIL---KKRYRRMKESDKARDIHQKWLLRNK 572
           ++ D + +  +     R  R++E+ K   I Q   +R K
Sbjct: 589 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPK 627



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 188/393 (47%), Gaps = 6/393 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A  L  +   +G  PDV     L+  LC+ G    A  V+R       + +   YN  + 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           GYCR  +LD A  L ++M    + P+  T+  ++  LC +G +G+A+  L ++L      
Sbjct: 153 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG--- 206

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
               V+T T+L+++  K+    QA+ + ++M  K    +IV YNV+ING C  G +  A 
Sbjct: 207 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 266

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            +  ++   GF PD ++Y T+L  LC   + ++    +  + +    P+++++  +++  
Sbjct: 267 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 326

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G + +A + L  M          + N++I+   + G + +AF   + M S+G S + 
Sbjct: 327 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 386

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            ++  ++    R     DA  L KEM+     P+  T+N  I   C  G I  A  L ++
Sbjct: 387 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 446

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           M   G   +I+TY  L+ G C +G +  A E+F
Sbjct: 447 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 479



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 205/459 (44%), Gaps = 44/459 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR+LC  G+   A  + R   + GT  DV  +N LV   C+ G L+ A  +I   + M 
Sbjct: 115 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLI---ASMP 171

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  TY   I G C    + +AL L   M + G +P+ VT+ +L+ A+CK    G A+
Sbjct: 172 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 231

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E+ A      T +++T  ++++   + G    A    N +     Q D V+Y  ++
Sbjct: 232 EVLDEMRAKG---CTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 288

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITY----------------------------- 334
            G C           F +M+++  +P+ +T+                             
Sbjct: 289 KGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCA 348

Query: 335 ------NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
                 N ++N +CKQG++D+A  F   +   G +PD ISY T+++GLC       A+E 
Sbjct: 349 ANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKEL 408

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  M+ K+  P    +N  I    + G +  A  + + M   G   N+ T+NAL+     
Sbjct: 409 LKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCV 468

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +  A  L   M      P+  TY  L+   CN   +  A +L  EML++   P+++T
Sbjct: 469 QGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVT 525

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +  L+   C +G M EA E+  ++   G   + I +  L
Sbjct: 526 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTL 564



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 202/422 (47%), Gaps = 8/422 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  +C  G++  A     ++   G  PD +++  ++  LC     E  + +  EM E  
Sbjct: 252 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 311

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T++  +  +CR   +++A+ +   M+ +G   N    NI+++ +CK+G + DA 
Sbjct: 312 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 371

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +FL  +        + D I+ T ++    +      A  L  +M +KN   + V +N  I
Sbjct: 372 QFLNNM---GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFI 428

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH-FYGVLSKTGV 362
              C  G I  A     QM + G   +++TYN L+N  C QG++D A   FY +  K   
Sbjct: 429 CILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK--- 485

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ I+Y T++ GLC    +  A E L  ML+K   P    +NV++  + + G +  A  
Sbjct: 486 -PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 544

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M+  G + N+ T+N L+   T+  +  +A  L   ++ +G+ PD+ TY+ +IG   
Sbjct: 545 LVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 604

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               +  A++++  +   G+ P  + Y +++   C R N   A + FA + + G   + +
Sbjct: 605 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 664

Query: 543 PF 544
            +
Sbjct: 665 TY 666



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 199/424 (46%), Gaps = 6/424 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            + D   +  V++ LC   +      L  +M++K  +P+ +T + LV   C+ G +E+A 
Sbjct: 277 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAI 336

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V+ +MS    + N    N  I   C+   +D A    + M + G  P+ +++  ++  L
Sbjct: 337 QVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGL 396

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C+     DA + L E++  +      + +T    +    + G   QA  L   M +   +
Sbjct: 397 CRAERWEDAKELLKEMVRKN---CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCE 453

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +IV YN L+NGFC+ G + SA   F  M  +   P+ ITY TLL  LC   +LD A+  
Sbjct: 454 VNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAEL 510

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + +   AP+ +++  ++   C  G + +A E +  M+E    P    +N ++DG  +
Sbjct: 511 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITK 570

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             +   A  +   ++S GVS ++ T++++I   +R   + +A  +   +   G+ P    
Sbjct: 571 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVI 630

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN ++ A C   +   A+  +  M+  G  P+ +TY  LI+G      +KE  ++  ++ 
Sbjct: 631 YNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELC 690

Query: 534 TLGL 537
           + G+
Sbjct: 691 SRGV 694



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 129/271 (47%), Gaps = 6/271 (2%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  G I  A  L  +M + G   +++T+N LVN  C  G   + D  +     M   PN
Sbjct: 431 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG---RVDSALELFYSMPCKPN 487

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY   +TG C    LD A  L + M      PN VT N+LV   C+KGL+ +A++ + 
Sbjct: 488 TITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVE 547

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           +++   +   T ++IT   L+D   K+ +  +AL L + +    +  DIV Y+ +I    
Sbjct: 548 QMM---EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 604

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
               +  A   F  +   G  P  + YN +L  LCK+   D A  F+  +   G  P+++
Sbjct: 605 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 664

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           +Y T+I+GL     + + R+ L  +  + V+
Sbjct: 665 TYITLIEGLANEDFLKETRDLLRELCSRGVL 695



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 3/222 (1%)

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A+      +  G APD      +I+ LC  G    A   L +        +   +N ++ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           GY R G L  A   R L+ S  V+ + +T+  +I      G + +A SL  +ML  G  P
Sbjct: 153 GYCRYGQLDAA---RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            V TY +L+ A C       A+++ DEM  +G TP+I+TY  +I G C  G + +A E  
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            ++ + G   D + +  + K     K  +   ++  + + +N
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 311


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 210/453 (46%), Gaps = 41/453 (9%)

Query: 129 CLG--GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           CLG  G++G AL    +M +K   P++ T+N L++ LCK G++E A  V   M E    P
Sbjct: 382 CLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFP 440

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N  T N  I   C+  +LD+A  +F  M +    P+ VT   L+  L K+G + DA +  
Sbjct: 441 NVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLY 500

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            ++L   D     + +  T L+ S+FK G K     ++ +M  +    D+   N  ++  
Sbjct: 501 EQML---DSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCV 557

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
              G+     A F ++  RGF+PDV++Y+ L++ L K G   E    +  + + G   D 
Sbjct: 558 FKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDT 617

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP-------------------EPH----- 402
            +Y T I G C  G + KA + L  M  K   P                   E +     
Sbjct: 618 HAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEE 677

Query: 403 -----------IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
                      I++ +IDG+G+ G +  A+ I + ++  G++ NV+T+N L+ A  +   
Sbjct: 678 AKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 737

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           I +A    + M      P+  TY++LI   C +   + A   + EM ++G+ P+ ITYT 
Sbjct: 738 INEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTT 797

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           +I G    GN+ EA  +F + +  G   D   +
Sbjct: 798 MIAGLAKAGNIAEASSLFERFKANGGVPDSASY 830



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 200/430 (46%), Gaps = 4/430 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK   A  L  +   +G +P V+ +N ++  L K G L +A     EM +   +PN +T
Sbjct: 351 AGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-DAAPNLST 409

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I   C+  E++ A  +   M   G+ PN +T NI++  LCK   L +A      + 
Sbjct: 410 YNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGM- 468

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             +    + D +T   L+D   K G    A  L+  M   +   + V Y  LI  F   G
Sbjct: 469 --NHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCG 526

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
                   F +M+ RG  PD+   N  ++C+ K G+  +    +  +   G  PD +SY 
Sbjct: 527 RKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYS 586

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +I GL   G   +  E   +M E+  V + H +N  IDG+ + G ++ A+ + + M + 
Sbjct: 587 ILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTK 646

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G    V T+ ++I    +   + +A+ L +E   +G+  +V  Y+ LI     +G I  A
Sbjct: 647 GRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEA 706

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
             + +E++++G+TP++ T+  L+        + EA   F  ++ L    +HI + IL   
Sbjct: 707 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILING 766

Query: 551 YRRMKESDKA 560
             R+++ +KA
Sbjct: 767 LCRVRKFNKA 776



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 197/444 (44%), Gaps = 32/444 (7%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  G++  A  +R  M + G  P+V+T N +++ LCK   L++A  +   M+    SP+
Sbjct: 417 LCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPD 476

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             T+ + I G  +   +D A  L+  M ++   PN V +  L+ +  K G   D  K   
Sbjct: 477 EVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFK 536

Query: 248 EVL--------------------ADDDGKATS------------DVITSTILMDSYFKNG 275
           E++                    A + GK  +            DV++ +IL+    K G
Sbjct: 537 EMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAG 596

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
              +   L+  M ++    D  AYN  I+GFC +G ++ A+    +M  +G  P V+TY 
Sbjct: 597 FARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYG 656

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           ++++ L K  +LDEA   +      G+  + + Y ++I G    G I +A   +  +++K
Sbjct: 657 SVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK 716

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
            + P  + WN ++D   +  +++ A      M +   + N  T++ LI    R      A
Sbjct: 717 GLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKA 776

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           F   +EM   G+ P+  TY  +I      G+I  A  L++     G  PD  +Y  +I+G
Sbjct: 777 FVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEG 836

Query: 516 HCARGNMKEAEEVFAKIQTLGLAI 539
                   EA ++F + +  G  I
Sbjct: 837 LSYSRRAMEAYKIFEETRMKGCNI 860



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/449 (24%), Positives = 207/449 (46%), Gaps = 10/449 (2%)

Query: 129 CLG--GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           C G  GK+  A     ++   G +PD +T+  ++  LCK   L++A  +  +M + R  P
Sbjct: 277 CFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVP 336

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
               YN  I GY    + D+A  L       G  P+ + +N ++  L KKG LG+A++  
Sbjct: 337 CAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTF 396

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            E+  D    A  ++ T  +L+D   K G+   A  + + M +  +  +++  N++I+  
Sbjct: 397 EEMKKD----AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRL 452

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C    +  A + F  M  +   PD +T+ +L++ L KQG++D+A   Y  +  +   P+ 
Sbjct: 453 CKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNA 512

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           + Y ++I+     G      +    M+ +   P+  + N  +D   + G+     ++ + 
Sbjct: 513 VVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEE 572

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           + S G   +V +++ LI    + G   + + L   M   G   D   YN  I   C  G 
Sbjct: 573 IKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGK 632

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           ++ A QL +EM  +G  P ++TY  +I G      + EA  +F + ++ GL ++ + +  
Sbjct: 633 VNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSS 692

Query: 547 LKKRYRRMKESDKA----RDIHQKWLLRN 571
           L   + ++   D+A     ++ QK L  N
Sbjct: 693 LIDGFGKVGRIDEAYLIMEELMQKGLTPN 721



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 185/413 (44%), Gaps = 4/413 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VIR     G++  AL L  +M       D++ +N  ++   K G ++ A     E+    
Sbjct: 239 VIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHG 298

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY + I   C+ N LD+A+ +F  M  N   P    +N ++      G   +A 
Sbjct: 299 LLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAY 358

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L    A         VI    ++    K G   +AL  + +M +K+   ++  YNVLI
Sbjct: 359 SLLERQKARG---CIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLI 414

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G++ +AF     M + G  P+V+T N +++ LCK  KLDEA   +  ++    +
Sbjct: 415 DMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICS 474

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD++++ ++I GL   G +  A      ML+   +P   ++  +I  + +CG   +   I
Sbjct: 475 PDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKI 534

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+  G S ++   NA +    + G      +L +E+   G  PDV +Y++LI     
Sbjct: 535 FKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVK 594

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            G      +L+  M  +G   D   Y   I G C  G + +A ++  +++T G
Sbjct: 595 AGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKG 647



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 173/376 (46%), Gaps = 12/376 (3%)

Query: 39  NSRTCSDDDNLPCTLNDIMSYVGDQCRSKTRHWFSNKDSDNEGNPQAVF--NALDLILK- 95
           N + CS D+   C+L D +   G Q R    +    +  D++  P AV   + +    K 
Sbjct: 469 NHKICSPDEVTFCSLIDGL---GKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKC 525

Query: 96  -ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
               D  K  ++     C+   D R   A +  +   G+ G    L  ++  +G +PDV+
Sbjct: 526 GRKEDGHKIFKEMIHRGCS--PDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVM 583

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           +++ L++ L K G   +   +   M E     +   YN FI G+C+  +++KA  L   M
Sbjct: 584 SYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEM 643

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G +P  VT+  ++  L K   L +A     E  A  +G   + VI S+ L+D + K 
Sbjct: 644 KTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEE--AKSNGLELNVVIYSS-LIDGFGKV 700

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +A  +  ++ QK +  ++  +N L++      +I+ A   F  M      P+ ITY
Sbjct: 701 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITY 760

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           + L+N LC+  K ++A  F+  + K G+ P+ I+Y T+I GL   G+I +A         
Sbjct: 761 SILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKA 820

Query: 395 KSVVPEPHIWNVIIDG 410
              VP+   +N II+G
Sbjct: 821 NGGVPDSASYNAIIEG 836



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 178/405 (43%), Gaps = 11/405 (2%)

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
           W  RK  Q    P+      LV  + K    +  + ++ EMS     P+  T    I   
Sbjct: 117 WTERKTDQ-ALCPEAYDSLLLV--MAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSC 173

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            + N+L +   L   M     RP    +  L+ AL       D +  L   + +   + +
Sbjct: 174 IKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQE-SDIMLTLFHQMQELGYEVS 232

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
             + T+ I +  + + G    AL+L ++M    +  DIV YNV I+ F   G +  A+ +
Sbjct: 233 VHLFTTVIRV--FAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKF 290

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           F ++   G LPD +TY +++  LCK  +LDEA   +  + +    P   +Y T+I G   
Sbjct: 291 FHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGS 350

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G   +A   L     +  +P    +N I+   G+ G L  A    + M     + N+ T
Sbjct: 351 AGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-DAAPNLST 409

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N LI    + G +  AF ++  M   G+FP+V T N++I   C    +  A  +++ M 
Sbjct: 410 YNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMN 469

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            +  +PD +T+  LI G   +G + +A  ++ ++    L  D IP
Sbjct: 470 HKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQM----LDSDKIP 510


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 208/451 (46%), Gaps = 8/451 (1%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+ M   GP  C      R   AVI   C  G +     L   M +    PDV  +N L+
Sbjct: 137 LRGMIHQGPRPCN-----RNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILI 191

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           N  C  G    A   +R M +   +P+  T+   I  +C    + +A +LF  M   G  
Sbjct: 192 NAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHI 251

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           PN V +N L++   K   +G A     E+ +        D  T  IL+  +++ G +   
Sbjct: 252 PNVVCYNTLMNGYVKARDIGQANMLYEEMKSK---AVAPDCTTFNILVAGHYRYGREEDR 308

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
             L  D+ Q    +    YN+ ++G C  G +  A  +   ML++G  P V+ +N+++  
Sbjct: 309 DRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAA 368

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
             + G  ++A   Y ++ K G+ P  ++  ++I GL     + +AR+ L  M+ + +   
Sbjct: 369 YSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPIN 428

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              + +++DGY R GD++ A+S+ + M   G+  +   F+A I   +  G + +A+ +  
Sbjct: 429 KAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFL 488

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           +M   G  P+ F YN LI   CN G +  AL L  EM R+G+ PDI T   +I G C  G
Sbjct: 489 QMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEG 548

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            MK A +VF  +   GL  D + +  L   Y
Sbjct: 549 RMKSASDVFRNMHHTGLIPDIVTYNTLIDGY 579



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 198/402 (49%), Gaps = 4/402 (0%)

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +N  V+ LC  G L++A   + +M E   +P    +N+ I  Y R    +KA   +  M 
Sbjct: 327 YNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMV 386

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
             G+ P+ +T + L+  L K   L +A   L E++ +       +    T+L+D YF+ G
Sbjct: 387 KFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEG---LPINKAAFTLLLDGYFRMG 443

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
           D   A +LWN+M  + I  D VA++  ING  + G +  A+  F QM K+GF+P+   YN
Sbjct: 444 DVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYN 503

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           +L+   C  G+L EA      +++ G+ PD  +   II GLC  G +  A +   +M   
Sbjct: 504 SLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHT 563

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
            ++P+   +N +IDGY +  D  +   + + M + G   ++ T+N  +     G  +  A
Sbjct: 564 GLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRA 623

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             + +E++  G+ PD  TYN ++   C    +  A+ +  ++L+    P+++T   L+  
Sbjct: 624 VMMLEELISAGVVPDTVTYNTVMNGVCT-DVLERAMIVTAKLLKMAFVPNVVTANLLLSH 682

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
            C +G  ++      K+  +    D I  +++ + YR ++++
Sbjct: 683 FCKQGMPEKTIMWGQKLNEISFGFDEISIKLMDRAYRNIQDN 724



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 133/299 (44%)

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           TIL     + GD      L   M  +  +     +N +I GFC  G +    +  C M K
Sbjct: 118 TILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQK 177

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
               PDV  YN L+N  C +G+  +A  +   +   G  P  +++ T+I   C  G++++
Sbjct: 178 FKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMME 237

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           AR     M E   +P    +N +++GY +  D+  A  + + M S  V+ +  TFN L+ 
Sbjct: 238 ARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVA 297

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              R G   D   L +++   G       YN+ +   C  G +  A++  ++ML +GITP
Sbjct: 298 GHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITP 357

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            ++ +  +I  +   G  ++A + +  +   GL    +    L     ++    +ARD+
Sbjct: 358 TVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDL 416



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 112/248 (45%), Gaps = 39/248 (15%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++IR  C  G++  AL L R+M +KG +PD+ T N ++N LCK G ++ A  V R M   
Sbjct: 504 SLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHT 563

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  I GYC+  +      + + M   G  P+  T+NI +H LC    +  A
Sbjct: 564 GLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRA 623

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V  L E+++                                        +  D V YN +
Sbjct: 624 VMMLEELIS--------------------------------------AGVVPDTVTYNTV 645

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +NG C +  +  A     ++LK  F+P+V+T N LL+  CKQG  ++   +   L++   
Sbjct: 646 MNGVCTD-VLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEKTIMWGQKLNEISF 704

Query: 363 APDQISYK 370
             D+IS K
Sbjct: 705 GFDEISIK 712



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 1/236 (0%)

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           F  D    +TL+    K     EA    G + + G+ P   +   + + L   GD     
Sbjct: 75  FESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVW 134

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + L  M+ +   P    +N +I G+ R G +    S+  +M  F    +V+ +N LI A 
Sbjct: 135 KLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAY 194

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G  FDA    + M+ +G  P + T+  +I A CN G++  A  L+D M   G  P++
Sbjct: 195 CTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNV 254

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL-KKRYRRMKESDKAR 561
           + Y  L+ G+    ++ +A  ++ ++++  +A D   F IL    YR  +E D+ R
Sbjct: 255 VCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDR 310



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 81/186 (43%), Gaps = 6/186 (3%)

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A E +  M E  + P      ++     R GD  + + +   M+  G       FNA+I
Sbjct: 97  EALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVI 156

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
           L   R G +    SL   M      PDV+ YN+LI A C  G    AL     M+  G T
Sbjct: 157 LGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCT 216

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P ++T+  +I   C +GNM EA  +F  ++  G    HIP  +       M    KARDI
Sbjct: 217 PSLVTFGTVINAFCNQGNMMEARNLFDGMKEAG----HIPNVVCYNTL--MNGYVKARDI 270

Query: 564 HQKWLL 569
            Q  +L
Sbjct: 271 GQANML 276


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 190/382 (49%), Gaps = 38/382 (9%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+VL+ N ++  +CK+G +++A  V REM+  +  P+  TY   + G C+ + +D+A+ L
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 245

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   G  P+ VT N+L++ LCKKG                      D++  T L+D 
Sbjct: 246 LDEMQIEGCFPSSVTFNVLINGLCKKG----------------------DMVRVTKLVD- 282

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                          +MF K    + V YN +ING CL G +  A +   +M+    +P+
Sbjct: 283 ---------------NMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPN 327

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            +TY TL+N L KQG+  +  H    L + G   ++ +Y T+I GL       +A     
Sbjct: 328 DVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWK 387

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M+EK   P   +++ +IDG  R G L  A  I   M++ G + N FT+++LI    + G
Sbjct: 388 KMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTG 447

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           +   A  + KEM  +   P+   Y++LI   C  G +  A+ ++  ML RG+ PD++ Y+
Sbjct: 448 NSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYS 507

Query: 511 ELIKGHCARGNMKEAEEVFAKI 532
            +I G C  G+++   ++F ++
Sbjct: 508 SMIHGLCNAGSVEVGLKLFNEM 529



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 192/412 (46%), Gaps = 39/412 (9%)

Query: 98  LDR-LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           +DR ++  R+    +C  E D   +  ++  LC   +I  A+ L  +M  +G  P  +T 
Sbjct: 204 VDRAIEVFREMAIQKC--EPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 261

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N L+N LCK GD+ +   ++  M      PN  TYN  I G C   +LDKA+ L   M  
Sbjct: 262 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 321

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
           +   PN VT+  L++ L K+G   D V  L  +  ++ G   ++   ST L+   FK   
Sbjct: 322 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSL--EERGHHANEYAYST-LISGLFKEEK 378

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A+ LW  M +K  Q +IV Y+ LI+G C  G +  A    C+M+ +G  P+  TY++
Sbjct: 379 SEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSS 438

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L+    K G   +A   +  ++K    P++I Y  +I GLC  G + +A      ML + 
Sbjct: 439 LIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG 498

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           + P+   ++ +I G      L NA S         V   +  FN ++  E+         
Sbjct: 499 LRPDVVAYSSMIHG------LCNAGS---------VEVGLKLFNEMLCQESDSQ------ 537

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
                       PDV TYN+L+ A C    I  A+ L + ML RG  PD+IT
Sbjct: 538 ------------PDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLIT 577



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 179/400 (44%), Gaps = 15/400 (3%)

Query: 169 LEKADHVIREMSEMRPSPNC-ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV--- 224
           L+   ++ +  S+M    +  +T+ + I  Y    +      +F  M     R  RV   
Sbjct: 60  LQSETYIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMK----RERRVFIE 115

Query: 225 THNILV-HALCKKGLLGDAVKFLGEVLADDDGKATS---DVITSTILMDSYFKNGDKFQA 280
            + ILV  A  K  L   A++  G ++ +   + T    + + + I+ +  F    +F  
Sbjct: 116 KNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYE 175

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
             +     + NI  +++++N++I   C  G +  A   F +M  +   PDV TY TL++ 
Sbjct: 176 CGVGG---KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDG 232

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           LCK+ ++DEA      +   G  P  +++  +I GLC  GD+V+  + + +M  K  VP 
Sbjct: 233 LCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPN 292

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +N II+G    G L  A S+ D M++     N  T+  LI    + G   D   L  
Sbjct: 293 EVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLS 352

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            +   G   + + Y+ LI           A+ L+ +M+ +G  P+I+ Y+ LI G C  G
Sbjct: 353 SLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREG 412

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            + EA+E+  ++   G   +   +  L K + +   S KA
Sbjct: 413 KLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 452



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 133/274 (48%), Gaps = 19/274 (6%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L +KM++KG  P+++ ++ L++ LC+ G L++A  ++ EM     +PN  TY++ I 
Sbjct: 382 AMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIK 441

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G+ +     KA+ ++  MA N   PN + +++L+H LC+ G L +A+     +L      
Sbjct: 442 GFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG--- 498

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMF--QKNIQTDIVAYNVLINGFCLNGDISS 314
              DV+  + ++      G     L L+N+M   + + Q D+V YN+L+   C    IS 
Sbjct: 499 LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISH 558

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A      ML RG  PD+IT N  LN L  + KL+        L +            ++ 
Sbjct: 559 AIDLLNSMLDRGCNPDLITCNIFLNAL--REKLNPPQDGREFLDE------------LVV 604

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            L     IV A + +  ML+K + P    W  II
Sbjct: 605 RLHKRQRIVGAAKIIEVMLQKFLPPNASTWERII 638



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 124/257 (48%), Gaps = 15/257 (5%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I  LC  GK+  A  +  +M+ KG  P+  T++ L+    K G+ +KA  V +EM+
Sbjct: 401 YSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA 460

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN   Y+  I G C   +L +A+ +++ M   G+RP+ V ++ ++H LC  G + 
Sbjct: 461 KNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVE 520

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
             +K   E+L  +   +  DV+T  IL+ +  K      A+ L N M  +    D++  N
Sbjct: 521 VGLKLFNEMLCQES-DSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCN 579

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           + +N   L   ++           R FL +++        L K+ ++  A+    V+ + 
Sbjct: 580 IFLNA--LREKLNPP------QDGREFLDELVVR------LHKRQRIVGAAKIIEVMLQK 625

Query: 361 GVAPDQISYKTIIQGLC 377
            + P+  +++ II  LC
Sbjct: 626 FLPPNASTWERIIPELC 642



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 2/240 (0%)

Query: 331 VITYNTLLNCLCKQGKLDEASHFY--GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           V ++N++LN + ++G    A  FY  GV  KT ++P+ +S+  +I+ +C  G + +A E 
Sbjct: 151 VRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEV 210

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              M  +   P+   +  ++DG  +   +  A  + D M   G   +  TFN LI    +
Sbjct: 211 FREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCK 270

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +     L   M L G  P+  TYN +I   C  G +  A+ L D M+     P+ +T
Sbjct: 271 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 330

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           Y  LI G   +G   +   + + ++  G   +   +  L     + ++S++A  + +K +
Sbjct: 331 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 390


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 190/382 (49%), Gaps = 38/382 (9%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+VL+ N ++  +CK+G +++A  V REM+  +  P+  TY   + G C+ + +D+A+ L
Sbjct: 170 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 229

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   G  P+ VT N+L++ LCKKG                      D++  T L+D 
Sbjct: 230 LDEMQIEGCFPSSVTFNVLINGLCKKG----------------------DMVRVTKLVD- 266

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                          +MF K    + V YN +ING CL G +  A +   +M+    +P+
Sbjct: 267 ---------------NMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPN 311

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            +TY TL+N L KQG+  +  H    L + G   ++ +Y T+I GL       +A     
Sbjct: 312 DVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWK 371

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M+EK   P   +++ +IDG  R G L  A  I   M++ G + N FT+++LI    + G
Sbjct: 372 KMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTG 431

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           +   A  + KEM  +   P+   Y++LI   C  G +  A+ ++  ML RG+ PD++ Y+
Sbjct: 432 NSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYS 491

Query: 511 ELIKGHCARGNMKEAEEVFAKI 532
            +I G C  G+++   ++F ++
Sbjct: 492 SMIHGLCNAGSVEVGLKLFNEM 513



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 191/387 (49%), Gaps = 5/387 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI+ +C  G +  A+ + R+M  +   PDV T+  L++ LCK   +++A  ++ EM    
Sbjct: 178 VIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEG 237

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T+N  I G C+  ++ +   L   M   G  PN VT+N +++ LC KG L  AV
Sbjct: 238 CFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAV 297

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L  ++A    K   + +T   L++   K G     + L + + ++    +  AY+ LI
Sbjct: 298 SLLDRMVAS---KCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLI 354

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G         A   + +M+++G  P+++ Y+ L++ LC++GKLDEA      +   G  
Sbjct: 355 SGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCT 414

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+  +Y ++I+G    G+  KA      M + + VP    ++V+I G    G L  A  +
Sbjct: 415 PNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMM 474

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD--GIFPDVFTYNLLIGAS 481
              ML  G+  +V  ++++I      GS+     L  EML       PDV TYN+L+ A 
Sbjct: 475 WTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRAL 534

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIIT 508
           C    I  A+ L + ML RG  PD+IT
Sbjct: 535 CKQNSISHAIDLLNSMLDRGCNPDLIT 561



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 186/386 (48%), Gaps = 8/386 (2%)

Query: 98  LDR-LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           +DR ++  R+    +C  E D   +  ++  LC   +I  A+ L  +M  +G  P  +T 
Sbjct: 188 VDRAIEVFREMAIQKC--EPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 245

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N L+N LCK GD+ +   ++  M      PN  TYN  I G C   +LDKA+ L   M  
Sbjct: 246 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 305

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
           +   PN VT+  L++ L K+G   D V  L  +  ++ G   ++   ST L+   FK   
Sbjct: 306 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSL--EERGHHANEYAYST-LISGLFKEEK 362

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A+ LW  M +K  Q +IV Y+ LI+G C  G +  A    C+M+ +G  P+  TY++
Sbjct: 363 SEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSS 422

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L+    K G   +A   +  ++K    P++I Y  +I GLC  G + +A      ML + 
Sbjct: 423 LIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG 482

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS--NVFTFNALILAETRGGSIFD 454
           + P+   ++ +I G    G +     + + ML     S  +V T+N L+ A  +  SI  
Sbjct: 483 LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISH 542

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGA 480
           A  L   ML  G  PD+ T N+ + A
Sbjct: 543 AIDLLNSMLDRGCNPDLITCNIFLNA 568



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 178/401 (44%), Gaps = 15/401 (3%)

Query: 168 DLEKADHVIREMSEMRPSPNC-ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV-- 224
           D    D + +  S+M    +  +T+ + I  Y    +      +F  M     R  RV  
Sbjct: 43  DAPIPDQIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMK----RERRVFI 98

Query: 225 -THNILV-HALCKKGLLGDAVKFLGEVLADDDGKATS---DVITSTILMDSYFKNGDKFQ 279
             + ILV  A  K  L   A++  G ++ +   + T    + + + I+ +  F    +F 
Sbjct: 99  EKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFY 158

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
              +     + NI  +++++N++I   C  G +  A   F +M  +   PDV TY TL++
Sbjct: 159 ECGVGG---KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMD 215

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LCK+ ++DEA      +   G  P  +++  +I GLC  GD+V+  + + +M  K  VP
Sbjct: 216 GLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVP 275

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +N II+G    G L  A S+ D M++     N  T+  LI    + G   D   L 
Sbjct: 276 NEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLL 335

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
             +   G   + + Y+ LI           A+ L+ +M+ +G  P+I+ Y+ LI G C  
Sbjct: 336 SSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCRE 395

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G + EA+E+  ++   G   +   +  L K + +   S KA
Sbjct: 396 GKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 436



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 133/274 (48%), Gaps = 19/274 (6%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L +KM++KG  P+++ ++ L++ LC+ G L++A  ++ EM     +PN  TY++ I 
Sbjct: 366 AMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIK 425

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G+ +     KA+ ++  MA N   PN + +++L+H LC+ G L +A+     +L      
Sbjct: 426 GFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRG--- 482

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMF--QKNIQTDIVAYNVLINGFCLNGDISS 314
              DV+  + ++      G     L L+N+M   + + Q D+V YN+L+   C    IS 
Sbjct: 483 LRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISH 542

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A      ML RG  PD+IT N  LN L  + KL+        L +            ++ 
Sbjct: 543 AIDLLNSMLDRGCNPDLITCNIFLNAL--REKLNPPQDGREFLDE------------LVV 588

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
            L     IV A + +  ML+K + P    W  II
Sbjct: 589 RLHKRQRIVGAAKIIEVMLQKFLPPNASTWERII 622



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 110/238 (46%), Gaps = 2/238 (0%)

Query: 331 VITYNTLLNCLCKQGKLDEASHFY--GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           V ++N++LN + ++G    A  FY  GV  KT ++P+ +S+  +I+ +C  G + +A E 
Sbjct: 135 VRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEV 194

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              M  +   P+   +  ++DG  +   +  A  + D M   G   +  TFN LI    +
Sbjct: 195 FREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCK 254

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +     L   M L G  P+  TYN +I   C  G +  A+ L D M+     P+ +T
Sbjct: 255 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 314

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           Y  LI G   +G   +   + + ++  G   +   +  L     + ++S++A  + +K
Sbjct: 315 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKK 372


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 212/434 (48%), Gaps = 4/434 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A+ +  +M  +G VP   T N +++    +G +E A+++  EM +   SP+C ++
Sbjct: 168 GKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              +   C +  + +A    + M   G   +  T  +++ A C+KG +   V +  +++ 
Sbjct: 228 KLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV- 286

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     +VI  T L++   K G   QA  L  +M ++  + ++  +  LI+G C  G 
Sbjct: 287 --EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGW 344

Query: 312 ISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
              AF  F ++++  G+ P+V TY  ++N  CK+ KL+ A      + + G+ P+  +Y 
Sbjct: 345 TEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYT 404

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T+I G C  G+ V+A E +  M ++   P  + +N IIDG  + G L  A+ + + +   
Sbjct: 405 TLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVH 464

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+ ++  T+  L+    R      +     +ML  G  PD+ +Y  LI   C    +  +
Sbjct: 465 GLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKES 524

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
            +L++E +  G+ P   TYT +I G+C  GN   A ++F ++   G A D I +  L   
Sbjct: 525 ERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISG 584

Query: 551 YRRMKESDKARDIH 564
             +  + D AR+++
Sbjct: 585 LCKESKLDDARNLY 598



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 187/404 (46%), Gaps = 3/404 (0%)

Query: 130 LGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCA 189
           +G  +    WL   M+++G + D  T   +++  C+ G + +      +M EM  +PN  
Sbjct: 237 MGRVLEAERWLN-AMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVI 295

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            + A I G C+   + +A  L   M   G +PN  TH  L+  LCKKG    A +   ++
Sbjct: 296 NFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKL 355

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +  D  K   +V T T +++ Y K     +A  L + M ++ +  +   Y  LI+G C  
Sbjct: 356 VRSDGYKP--NVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKV 413

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G+   A+     M K GF P++ TYN +++ LCK+G LDEA      +S  G+  D ++Y
Sbjct: 414 GNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTY 473

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             ++   C   D  ++  F   ML+    P+ H +  +I  + R   +  +  + +  +S
Sbjct: 474 TILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVS 533

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+     T+ ++I    R G+   A  L + M   G  PD  TY  LI   C    +  
Sbjct: 534 LGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDD 593

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           A  LYD M+ +G++P  +T   L   +C + +   A  V  +++
Sbjct: 594 ARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLE 637



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 118/476 (24%), Positives = 220/476 (46%), Gaps = 19/476 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLG-GKIGTALWLRRKMIQKGTVPD 152
           LKE ++ +  M++ G V  T      + +  + D+ +G G +  A  +  +M Q+G  PD
Sbjct: 170 LKEAVNMVVEMQNQGLVPST------QTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPD 223

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
            ++   +V   C +G + +A+  +  M E     + AT    I  +C+   +++ +  F 
Sbjct: 224 CVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW 283

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M   G+ PN +    L++ LCK+G +  A + L E++         +V T T L+D   
Sbjct: 284 KMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRG---WKPNVYTHTTLIDGLC 340

Query: 273 KNGDKFQALALW-----NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           K G   +A  L+     +D ++ N+ T    Y  +ING+C    ++ A     +M ++G 
Sbjct: 341 KKGWTEKAFRLFLKLVRSDGYKPNVHT----YTAMINGYCKEDKLNRAEMLLSRMQEQGL 396

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +P+  TY TL++  CK G    A     ++ K G +P+  +Y  II GLC  G + +A  
Sbjct: 397 VPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYR 456

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L  +    +  +   + +++  + R  D + +    + ML  G + ++ ++  LI    
Sbjct: 457 LLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFC 516

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           R   + ++  L +E +  G+ P   TY  +I   C  G+  LA++L+  M   G  PD I
Sbjct: 517 RQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSI 576

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           TY  LI G C    + +A  ++  +   GL+   +    L   Y +  +S  A ++
Sbjct: 577 TYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINV 632



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 183/410 (44%), Gaps = 7/410 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G +   +    KM++ G  P+V+    L+N LCK G +++A  ++ EM    
Sbjct: 265 IIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRG 324

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMA-NNGIRPNRVTHNILVHALCKKGLLGDA 242
             PN  T+   I G C+    +KA  LF  +  ++G +PN  T+  +++  CK+  L  A
Sbjct: 325 WKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRA 384

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L  +    +     +  T T L+D + K G+  +A  L + M ++    +I  YN +
Sbjct: 385 EMLLSRM---QEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI 441

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C  G +  A+    ++   G   D +TY  L++  C+Q   + +  F+  + K G 
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGF 501

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  SY T+I   C    + ++       +   ++P    +  +I GY R G+ S A  
Sbjct: 502 TPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVK 561

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M + G + +  T+ ALI    +   + DA +L   M+  G+ P   T   L    C
Sbjct: 562 LFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYC 621

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
                  A+ + D + +R     I T   L++  C+ G +  A   F K+
Sbjct: 622 KKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKL 668



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 188/408 (46%), Gaps = 24/408 (5%)

Query: 158 YLVNELCKIGD--LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           Y+V+    IG+  LE+A+ V++ M               +  +    +L +A+++   M 
Sbjct: 137 YIVSATALIGNKNLERANEVMQCM---------------VMNFAENGKLKEAVNMVVEMQ 181

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           N G+ P+  T N ++      GL+  A     E+        + D ++  +++ +    G
Sbjct: 182 NQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG---VSPDCVSFKLMVVACCNMG 238

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
              +A    N M ++    D     ++I+ FC  G ++    YF +M++ G  P+VI + 
Sbjct: 239 RVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFT 298

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA-REFLLSMLE 394
            L+N LCKQG + +A      + + G  P+  ++ T+I GLC  G   KA R FL  +  
Sbjct: 299 ALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRS 358

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
               P  H +  +I+GY +   L+ A  +   M   G+  N  T+  LI    + G+   
Sbjct: 359 DGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVR 418

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A+ L   M  +G  P+++TYN +I   C  G +  A +L +++   G+  D +TYT L+ 
Sbjct: 419 AYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMS 478

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKESDK 559
            HC + +   +   F K+  +G   D   +  L     R ++MKES++
Sbjct: 479 VHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESER 526



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 167/350 (47%), Gaps = 5/350 (1%)

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
           R N V    +V    + G L +AV  + E+   + G   S    + +L D     G    
Sbjct: 152 RANEVMQ-CMVMNFAENGKLKEAVNMVVEM--QNQGLVPSTQTLNCVL-DVAVGMGLVEI 207

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  ++ +M Q+ +  D V++ +++   C  G +  A  +   M++RGF+ D  T   +++
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIID 267

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C++G ++    ++  + + G+AP+ I++  +I GLC  G I +A E L  M+ +   P
Sbjct: 268 AFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKP 327

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
             +    +IDG  + G    AF +   L+ S G   NV T+ A+I    +   +  A  L
Sbjct: 328 NVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEML 387

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
              M   G+ P+  TY  LI   C +G+   A +L D M + G +P+I TY  +I G C 
Sbjct: 388 LSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCK 447

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +G++ EA  +  K+   GL  D + + IL   + R  +++++     K L
Sbjct: 448 KGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 61/130 (46%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I   C   ++  +  L  + +  G +P   T+  ++   C+ G+   A  + 
Sbjct: 504 DIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLF 563

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           + MS    +P+  TY A I+G C+ ++LD A +L+  M + G+ P  VT   L +  CKK
Sbjct: 564 QRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKK 623

Query: 237 GLLGDAVKFL 246
                A+  L
Sbjct: 624 DDSSTAINVL 633



 Score = 46.2 bits (108), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 3/132 (2%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           + + ++I   C  G    A+ L ++M   G  PD +T+  L++ LCK   L+ A ++   
Sbjct: 541 KTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDA 600

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M +   SP   T       YC+ ++   A+++   +     R    T N LV  LC +G 
Sbjct: 601 MMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK---RQWIRTVNTLVRKLCSEGK 657

Query: 239 LGDAVKFLGEVL 250
           L  A  F  ++L
Sbjct: 658 LDMAALFFHKLL 669


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 197/424 (46%), Gaps = 9/424 (2%)

Query: 113 TLETDYRRHVA-VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
            L+  +RR  A     LC   ++G A  +  +M +KG  PD +T+  +V+ LCK+  L++
Sbjct: 130 ALQPPHRRAAAGRTWALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDE 189

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A  V+  M      P  A+YNA +   CR   + +   + S M   G++PN +T+  +V 
Sbjct: 190 ATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVD 244

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
           A CK G L  A   L  ++       T +V+T T L+   F +G    AL +W  M  + 
Sbjct: 245 AFCKAGELRMACAILARMVITG---CTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEG 301

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
                V+YN+LI G C  GD+  A +    M + G  P+V TY+TL++   K G L  A 
Sbjct: 302 WAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAI 361

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
             +  +S++G  P+ + Y  ++   C      +A+  +  ML ++  P    +N +I   
Sbjct: 362 SIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSL 421

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
             C  +  A  +   M   G   N  T+N LI    R G+  DA  +  EM   GI   +
Sbjct: 422 CDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSL 481

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TYN ++   C       A+    +M+ +GI P+  T++ +I  +C  G ++ A  +   
Sbjct: 482 VTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGA 541

Query: 532 IQTL 535
           +  +
Sbjct: 542 MNVV 545



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 175/362 (48%), Gaps = 8/362 (2%)

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           C+ N +  A  +   MA  G  P+ VT+  +V  LCK   L +A + L    A     A+
Sbjct: 147 CQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLA---AMPPVAAS 203

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            + I   +  +  F+  + F  +   +DM  + +Q +++ Y  +++ FC  G++  A A 
Sbjct: 204 YNAIVLALCRE--FRMQEVFSVV---SDMVGRGLQPNVITYTTIVDAFCKAGELRMACAI 258

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             +M+  G  P+V+T+  L+  L   G++ +A   +  +   G AP  +SY  +I+GLC 
Sbjct: 259 LARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCS 318

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            GD+  A   L SM +    P    ++ +IDG+ + GDL  A SI + M   G   NV  
Sbjct: 319 VGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVV 378

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +  ++    +      A SL  +MLL+   P+  T+N LI + C+   +  AL ++ EM 
Sbjct: 379 YTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMR 438

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
           R G  P+  TY ELI G    GN  +A  +  ++Q+ G+ +  + +  +     + + S 
Sbjct: 439 RHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSR 498

Query: 559 KA 560
           +A
Sbjct: 499 EA 500



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 189/418 (45%), Gaps = 6/418 (1%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           LDRL    +       +   Y    A++  LC   ++     +   M+ +G  P+V+T+ 
Sbjct: 184 LDRLDEATEVLAAMPPVAASYN---AIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYT 240

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            +V+  CK G+L  A  ++  M     +PN  T+ A + G      +  AL ++  M   
Sbjct: 241 TIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAE 300

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G  P+ V++NIL+  LC  G L  A   L  +   +      +V T + L+D + K GD 
Sbjct: 301 GWAPSTVSYNILIRGLCSVGDLKGASSILNSM---EQHGCFPNVRTYSTLIDGFSKAGDL 357

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             A+++WNDM +   + ++V Y  +++ FC     + A +   +ML     P+ +T+NTL
Sbjct: 358 GGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTL 417

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +  LC   ++  A   +  + + G  P+  +Y  +I GL   G+   A   +  M    +
Sbjct: 418 IRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGI 477

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
                 +N ++ G  +      A      M+  G+  N FTF+A+I A  + G +  A  
Sbjct: 478 ELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAW 537

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           +   M +     ++  Y +L+   CN   +  A+    +ML  GI P+ +T+  L++G
Sbjct: 538 MLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRG 595



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 173/376 (46%), Gaps = 4/376 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ +   +  ++   C  G++  A  +  +M+  G  P+V+T   LV  L   G +  A 
Sbjct: 232 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 291

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + R M     +P+  +YN  I G C V +L  A  + ++M  +G  PN  T++ L+   
Sbjct: 292 DMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGF 351

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K G LG A+    ++          +V+  T ++D + K     QA +L + M  +N  
Sbjct: 352 SKAGDLGGAISIWNDM---SRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCP 408

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            + V +N LI   C    +  A   F +M + G +P+  TYN L++ L ++G   +A H 
Sbjct: 409 PNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHM 468

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              +   G+    ++Y T++ GLC      +A  F+  M+ + + P    ++ II  Y +
Sbjct: 469 VTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCK 528

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G++  A  +   M       N+  +  L+        + DA +   +ML +GI+P+  T
Sbjct: 529 EGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVT 588

Query: 474 YNLLI-GASCNLGHIH 488
           +N+L+ G   NLG I 
Sbjct: 589 WNVLVRGVFRNLGCIE 604



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 90/207 (43%), Gaps = 40/207 (19%)

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           LC+  ++  A      +++ G  PD ++Y TI+  LC    + +A E L +M   +    
Sbjct: 146 LCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAA--- 202

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
                                                ++NA++LA  R   + + FS+  
Sbjct: 203 -------------------------------------SYNAIVLALCREFRMQEVFSVVS 225

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           +M+  G+ P+V TY  ++ A C  G + +A  +   M+  G TP+++T+T L++G    G
Sbjct: 226 DMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDG 285

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            + +A +++  +   G A   + + IL
Sbjct: 286 RVHDALDMWRWMVAEGWAPSTVSYNIL 312



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           A C    +  A ++ DEM R+G  PD +TY  ++   C    + EA EV A +  +  + 
Sbjct: 145 ALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASY 204

Query: 540 DHIPFRILKKRYRRMKE 556
           + I   +   R  RM+E
Sbjct: 205 NAIVLALC--REFRMQE 219


>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Glycine max]
          Length = 678

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 229/490 (46%), Gaps = 37/490 (7%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L    R + A+I  L     I  A    ++M     V D  T+N L++ +CK+G +++A 
Sbjct: 175 LSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEAL 234

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++R+M +    PN  TY   I G+C  + +D+A  +F TM ++G+ PN  T   LVH +
Sbjct: 235 RLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGV 294

Query: 234 CKKGLLGDAVKFLGEVLADDDGKA------TSDVITSTILMDSYFKN-----------GD 276
            +      A++ L E L  +  +         D +   +  +S  K            G 
Sbjct: 295 FRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGG 354

Query: 277 KFQALALWN----------------DMFQ----KNIQTDIVAYNVLINGFCLNGDISSAF 316
            F   +++N                D+F+    + ++  I AY  LI     N       
Sbjct: 355 YFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGD 414

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             + Q++  G + +V +YN ++NC C+   +D AS  +  +   GV P+ +++ T+I G 
Sbjct: 415 RVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGH 474

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G I KAR+ L S+LE  + P+   ++ I+DG  +      A      M+ +G++ N 
Sbjct: 475 CKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNA 534

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
             +N LI +    G +  +  L + M  +GI PD ++YN LI   C +  +  A +L+D 
Sbjct: 535 VIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDS 594

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M R G+ PD  TY+  I+     G ++EA+++F  ++  G + D     ++ K   + + 
Sbjct: 595 MSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEY 654

Query: 557 SDKARDIHQK 566
            ++A++I ++
Sbjct: 655 VEEAQNIIER 664



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 221/496 (44%), Gaps = 38/496 (7%)

Query: 86  VFNAL-DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKM 144
           ++NAL D ++K N   L  ++           D   +  +I  +C  G +  AL L R+M
Sbjct: 181 LYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQM 240

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
             KG  P+V T+  L+   C    +++A  V   M +    PN AT  A + G  R  + 
Sbjct: 241 KDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDP 300

Query: 205 DKALHLFSTMANNGIRPNRVTH----NILVHALCKKGLLGDAVKFLGEVLADD---DGKA 257
            KAL L S   +      RV      + +++ L    +  + V FL  VL       G +
Sbjct: 301 SKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNS 360

Query: 258 TSDVITSTI------------------------------LMDSYFKNGDKFQALALWNDM 287
             +V+ + +                              L++  +KN  + +   ++  +
Sbjct: 361 VFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQL 420

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
               + +++ +YN++IN FC    + +A   F  M  RG +P+++T+NTL+N  CK G +
Sbjct: 421 ISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAI 480

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           D+A      L + G+ PD  ++ +I+ GLC      +A E    M+E  + P   I+N++
Sbjct: 481 DKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNIL 540

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I      GD++ +  +   M   G+S + +++NALI    R   +  A  L   M   G+
Sbjct: 541 IRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGL 600

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PD +TY+  I A    G +  A +++  M   G +PD      +IK    +  ++EA+ 
Sbjct: 601 NPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQN 660

Query: 528 VFAKIQTLGLAIDHIP 543
           +  + +  G++++ IP
Sbjct: 661 IIERCRQKGISLNSIP 676



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 198/422 (46%), Gaps = 10/422 (2%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P    +N L++ L K   ++ A    ++M+      +  TYN  I G C+V  +D+A
Sbjct: 174 GLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEA 233

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           L L   M + G  PN  T+ +L+   C    + +A    G      D     +  T   L
Sbjct: 234 LRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEA---FGVFETMKDSGVYPNEATVRAL 290

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING--FCL-NGDISSAFAYFCQML- 323
           +   F+  D  +AL L ++   +  + + V + +  +   +CL N  ++     F + + 
Sbjct: 291 VHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVL 350

Query: 324 -KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            + G+ P    +N ++ CL K  +L E    + +L K GV     +Y  +I+ L  +   
Sbjct: 351 GRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWR 410

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF-SIRDLMLSFGVSSNVFTFNA 441
            +       ++   ++     +N+II+ + R   + NA  + RD+ +  GV  N+ TFN 
Sbjct: 411 EEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVR-GVVPNLVTFNT 469

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI    + G+I  A  L + +L +G+ PD+FT++ ++   C +     AL+ + EM+  G
Sbjct: 470 LINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWG 529

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
           I P+ + Y  LI+  C  G++  + ++  ++Q  G++ D   +  L + + RM + +KA+
Sbjct: 530 INPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAK 589

Query: 562 DI 563
            +
Sbjct: 590 KL 591



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/362 (22%), Positives = 145/362 (40%), Gaps = 27/362 (7%)

Query: 223 RVTHNILVHALCKKGLLGDA---------VKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           RVT ++L   L   G LG A         + FLG         A  D +  +  +D  + 
Sbjct: 141 RVTEDLLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYL 200

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
              KFQ +A        N   D   YN LI+G C  G +  A     QM  +G  P+V T
Sbjct: 201 ---KFQQMA------ADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFT 251

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y  L+   C   ++DEA   +  +  +GV P++ + + ++ G+    D  KA E L   L
Sbjct: 252 YTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFL 311

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF-------GVSSNVFTFNALILAE 446
           ++    E   + +  D    C  L+N    +++++         G       FN ++   
Sbjct: 312 DREQEQERVHFMLACDTVLYC--LANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACL 369

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            +G  + +   + + +   G+   +  Y  LI             ++Y +++  G+  ++
Sbjct: 370 VKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNV 429

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            +Y  +I   C    M  A E F  +Q  G+  + + F  L   + +    DKAR + + 
Sbjct: 430 FSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLES 489

Query: 567 WL 568
            L
Sbjct: 490 LL 491



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 2/167 (1%)

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSF-GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
           ++  +GR G L+N  +     +SF G+S     +NALI A  +  SI  A+   ++M  D
Sbjct: 150 LLASWGRLG-LANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAAD 208

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
               D FTYN LI   C +G +  AL+L  +M  +G  P++ TYT LI+G C    + EA
Sbjct: 209 NCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEA 268

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
             VF  ++  G+  +    R L     R  +  KA ++  ++L R +
Sbjct: 269 FGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFLDREQ 315


>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 232/516 (44%), Gaps = 62/516 (12%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ ++  +  +I  L   G++  A  L+ +M+ +G   D++T   +++ L K+G  ++A+
Sbjct: 41  LDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAE 100

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V   + ++  +PNC TY+A + GYC++ +++ A  +   M    + PN +T + +++  
Sbjct: 101 EVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGY 160

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG-----DKF---------- 278
            KKG+L  AV  L E++  +      + I   IL+D YFK G     D F          
Sbjct: 161 AKKGMLSKAVDVLREMVQRN---VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLE 217

Query: 279 --------------------QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
                               +A +L  DM+ K I  DIV Y  LI+G+   G+  +A + 
Sbjct: 218 ESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSI 277

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLD--------------------EASHFYGVLS 358
             +M ++    DV+ YN L+  L + GK D                    +A      + 
Sbjct: 278 VQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMK 337

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             G+ P+ ++Y  +I GLC  G + KA   L  ML    VP P     ++  Y R     
Sbjct: 338 SYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKAD 397

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
               I + +++ G+  ++  +N LI    R G    A  +  EM+  GI  D+ TYN LI
Sbjct: 398 KILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALI 457

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG----NMKEAEEVFAKIQT 534
              C   H+  AL+ Y +M   GI P+I TY  L+ G    G     M+E E++ +++  
Sbjct: 458 RGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNE 517

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            GL  +   + IL   Y R+    K   +H + + +
Sbjct: 518 RGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITK 553



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 174/379 (45%), Gaps = 27/379 (7%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++  A  L   M  KG  PD++ +  L++   K G+   A  +++EM E     +   Y
Sbjct: 234 GRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAY 293

Query: 192 NAFITGYCRVNELDK--------------------ALHLFSTMANNGIRPNRVTHNILVH 231
           NA I G  R+ + D                     AL + + M + GI PN VT+NIL+ 
Sbjct: 294 NALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIG 353

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            LCK G +  A   L E+L  +        IT   L+ +Y ++    + L +   +    
Sbjct: 354 GLCKTGAVEKAESALDEMLVME---FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASG 410

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           ++  +  YN LI  FC  G    A     +M+KRG   D++TYN L+   C    +++A 
Sbjct: 411 LELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKAL 470

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHG----DIVKAREFLLSMLEKSVVPEPHIWNVI 407
             Y  +   G+AP+  +Y T++ GL   G     + +  + +  M E+ +VP    ++++
Sbjct: 471 KTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDIL 530

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           + GYGR G+      +   M++ G    + T+N LI    + G + +A  L  ++L  G 
Sbjct: 531 VSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGR 590

Query: 468 FPDVFTYNLLIGASCNLGH 486
            P+ FTY++L     NL +
Sbjct: 591 IPNSFTYDILTCGWLNLSY 609



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 214/471 (45%), Gaps = 58/471 (12%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++   C  GK+  A  L R+M + G  P+ +++  ++N L K G + +A ++  +M   
Sbjct: 15  SILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVR 74

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             S +  T    + G  +V +  +A  +F T+    + PN VT++ L+   CK G +  A
Sbjct: 75  GISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELA 134

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L ++   +      +VIT + +++ Y K G   +A+ +  +M Q+N+  + + Y +L
Sbjct: 135 ELVLQKM---EKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAIL 191

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G+   G+   A  +  +M  R      + ++ LLN L + G++DEA      +   G+
Sbjct: 192 IDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGI 251

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL----- 417
            PD ++Y ++I G    G+ + A   +  M EK++  +   +N +I G  R G       
Sbjct: 252 DPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYV 311

Query: 418 ---------------SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
                           +A  I + M S+G+  N  T+N LI    + G++  A S   EM
Sbjct: 312 CSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEM 371

Query: 463 LLDGIFPDVFT-----------------------------------YNLLIGASCNLGHI 487
           L+    P   T                                   YN LI   C LG  
Sbjct: 372 LVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMT 431

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
             A  + DEM++RGI+ D++TY  LI+G+C   ++++A + ++++   G+A
Sbjct: 432 RKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIA 482



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 198/447 (44%), Gaps = 23/447 (5%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           MI  G +PDV+T + ++   C+ G L +A  + REM EM   PN  +Y   I    +   
Sbjct: 1   MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           + +A +L S M   GI  + VT   ++  L K G   +A +    +L  +      + +T
Sbjct: 61  VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLN---LAPNCVT 117

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            + L+D Y K G    A  +   M ++++  +++ ++ +ING+   G +S A     +M+
Sbjct: 118 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 177

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           +R  +P+ I Y  L++   K G+ D A  F   +    +    + +  ++  L   G + 
Sbjct: 178 QRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMD 237

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +AR  ++ M  K + P+   +  +IDGY + G+   A SI   M    +  +V  +NALI
Sbjct: 238 EARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALI 297

Query: 444 LAETRGGS--------------------IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
               R G                       DA  +  EM   GI P+  TYN+LIG  C 
Sbjct: 298 KGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCK 357

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A    DEML     P  IT+  L+K +       +  ++  K+   GL +    
Sbjct: 358 TGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTV 417

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           +  L   + R+  + KA+ +  + + R
Sbjct: 418 YNTLITVFCRLGMTRKAKVVLDEMVKR 444



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 109/218 (50%), Gaps = 1/218 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  +++      K    L +  K++  G    +  +N L+   C++G   KA  V+ EM 
Sbjct: 383 HKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMV 442

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   S +  TYNA I GYC  + ++KAL  +S M  +GI PN  T+N L+  L   GL+ 
Sbjct: 443 KRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLME 502

Query: 241 DAVKFLGEVLADDDGKA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           + ++   +++++ + +    +  T  IL+  Y + G++ + + L  +M  K     +  Y
Sbjct: 503 EMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTY 562

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
           NVLI+ +  +G +  A      +L +G +P+  TY+ L
Sbjct: 563 NVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 600



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 6/174 (3%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG-- 167
           V+  +  D   + A+IR  C G  +  AL    +M   G  P++ T+N L+  L   G  
Sbjct: 442 VKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLM 501

Query: 168 --DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
              +E+ + ++ EM+E    PN ATY+  ++GY RV    K + L   M   G  P   T
Sbjct: 502 EEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKT 561

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADD--DGKATSDVITSTILMDSYFKNGDK 277
           +N+L+    K G + +A + L ++L         T D++T   L  SY    D+
Sbjct: 562 YNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDR 615


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 192/392 (48%), Gaps = 6/392 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M + G  P+ +T N LVN   K G     + ++  M+     PN  +YN  + G C++  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 204 LDKALHLFSTMANNGIR--PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
             +A  L   M + G R  P+ VT++ L+   CK G + ++ + L EV++        D 
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRG---LRPDA 117

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +  T ++ S  K+    +AL L  +M +      ++ +N LI+G C   ++  A +   +
Sbjct: 118 LMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQK 177

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M   G   DV+TYNTL++ LCK G+L EA      +  +G APD ++Y + + GLC  G 
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF-GVSSNVFTFN 440
           ++ A + L  M +    P    +N I+DG  + G +  A  + + M S  G   NV  ++
Sbjct: 238 VLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            ++    + G   +A S+ + M   G  PDV TY+ L+   C  G I  A++   EM   
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME 357

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           G  P+ +TY  L+ G C+ G + EAE +  ++
Sbjct: 358 GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 201/442 (45%), Gaps = 40/442 (9%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM--RPSPNCA 189
           G+ G    L   M  +   P+V+++N L+  LCK+    +A+ ++R+M     R +P+  
Sbjct: 24  GRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMV 83

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG------------ 237
           TY+  ++GYC+  +++++  L   + + G+RP+ + +  +V +LCK              
Sbjct: 84  TYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEM 143

Query: 238 --------------LLGDAVKFLGEVLADD------DGKATSDVITSTILMDSYFKNGDK 277
                         L+    +     +AD            +DV+T   LMD   K G  
Sbjct: 144 IRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRL 203

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +A  L   M       D+VAY+  + G C +G +  A     QM      P+V+TYNT+
Sbjct: 204 QEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTI 263

Query: 338 LNCLCKQGKLDEASHFYGVLSKT-GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L+ LCK GK+D A      ++ + G   + + Y T++ GLC  G   +AR  + +M    
Sbjct: 264 LDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG 323

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P+   ++ +++G  + G +  A      M   G   N  T+ +L+      G + +A 
Sbjct: 324 CRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAE 383

Query: 457 SLKKEMLLDGIF-----PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
            + +EM   G       P V TYN LIG  C  G I  AL+ +  M  +G  PD ++Y+ 
Sbjct: 384 RMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYST 443

Query: 512 LIKGHCARGNMKEAEEVFAKIQ 533
           +++G    G   +AE + ++++
Sbjct: 444 IVEGLARSGRALQAEMILSEVR 465



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 174/368 (47%), Gaps = 9/368 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++   C  GK+  +  L +++I +G  PD L +  +V  LCK   L +A  ++
Sbjct: 81  DMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELL 140

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P   T+N  I+G CR   L+ A  L   MA +G++ + VT+N L+  LCK 
Sbjct: 141 EEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKA 200

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L +A + L  + A        DV+  +  +    K+G    A  +   M   +   ++
Sbjct: 201 GRLQEAEQLLERMKASG---CAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNV 257

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           V YN +++G C +G I +A     QM    G   +V+ Y+T+++ LCK G+  EA     
Sbjct: 258 VTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVME 317

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +++ G  PD ++Y +++ GLC  G I +A E +  M  +   P    +  ++ G   CG
Sbjct: 318 AMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCG 377

Query: 416 DLSNAFSIRDLM-----LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            L+ A  + + M            +V T+NALI    + G I DA    + M   G  PD
Sbjct: 378 RLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPD 437

Query: 471 VFTYNLLI 478
             +Y+ ++
Sbjct: 438 GVSYSTIV 445



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 174/360 (48%), Gaps = 14/360 (3%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  V+  LC   ++G AL L  +MI+ G  P ++T N L++  C+  +LE AD
Sbjct: 113 LRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMAD 172

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++++M+      +  TYN  + G C+   L +A  L   M  +G  P+ V ++  V+ L
Sbjct: 173 SLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGL 232

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN-I 292
           CK G + DA + L ++    D     +V+T   ++D   K+G    AL +   M   +  
Sbjct: 233 CKSGKVLDAHQVLEQM---RDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGC 289

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             ++V Y+ +++G C  G    A +    M + G  PDV+TY++L+N LCK GK++EA  
Sbjct: 290 GLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVE 349

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV-----PEPHIWNVI 407
               ++  G  P+ ++Y +++ GLC  G + +A   +  M           P    +N +
Sbjct: 350 AVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNAL 409

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I G  + G + +A      M S G   +  +++ ++    R G      +L+ EM+L  +
Sbjct: 410 IGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR-----ALQAEMILSEV 464



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 157/337 (46%), Gaps = 6/337 (1%)

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G  PN VT N LV+   K+G  GD  + L  + A D      +V++   L++   K
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARD---IQPNVVSYNGLLEGLCK 57

Query: 274 NGDKFQALALWNDMFQKNIQT--DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
                +A  L  DM  +  ++  D+V Y+ L++G+C  G +  +     +++ RG  PD 
Sbjct: 58  LERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDA 117

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           + Y  ++  LCK  +L EA      + + G  P  I++ T+I G C   ++  A   L  
Sbjct: 118 LMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQK 177

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M    V  +   +N ++DG  + G L  A  + + M + G + +V  +++ +    + G 
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR-GITPDIITYT 510
           + DA  + ++M      P+V TYN ++   C  G I  AL++ ++M    G   +++ Y+
Sbjct: 238 VLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            ++ G C  G  +EA  V   +   G   D + +  L
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSL 334



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 2/171 (1%)

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P    +N +++G+ + G   +   + + M +  +  NV ++N L+    +     +A  L
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 459 KKEMLLDG--IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            ++M+  G    PD+ TY+ L+   C  G +  + +L  E++ RG+ PD + YT+++   
Sbjct: 68  VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           C    + EA E+  ++   G     I F  L     R K  + A  + QK 
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKM 178


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 193/424 (45%), Gaps = 27/424 (6%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P V T N ++  + K    E    + REMS+    PN  T+N  I G C    L KA
Sbjct: 193 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 252

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
            +L   M  NG  P  VT+N L++  CKKG    A++ +  ++        +DV T  + 
Sbjct: 253 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG---IEADVCTYNVF 309

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D+   N    +A  L   M ++ I  + V YN LINGF   G I  A   F +M K   
Sbjct: 310 IDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDL 369

Query: 328 LPDVITYNTLLNCLC-----------------------KQGKLDEASHFYGVLSKTGVAP 364
            P+ +TYN L+   C                       + G + EA   Y V++  G   
Sbjct: 370 SPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGA 429

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D  +   ++  LC  G + +A +FL  M    +VP    ++ II+GYG  GD  NAFS  
Sbjct: 430 DHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFF 489

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           D M+  G   + FT+ +L+    +GG++ +A      +       D   YN L+  +C  
Sbjct: 490 DDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKS 549

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG-LAIDHIP 543
           G++H A+ L+D+M++  + PD  TY+ L+ G C +G    A  +F      G L  +H+ 
Sbjct: 550 GNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 609

Query: 544 FRIL 547
           +  L
Sbjct: 610 YTCL 613



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 198/443 (44%), Gaps = 51/443 (11%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +   I +LC   +   A  L +KM ++   P+ +T+N L+N   K G +  A 
Sbjct: 299 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 358

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V  EMS+   SPNC TYNA I G+C V + ++AL L   M   G+R N           
Sbjct: 359 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN----------- 407

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            + G + +A+K    +  +  G   +D  T  +L+ S  ++G   +A      M +  + 
Sbjct: 408 -EHGNVTEAMKVYAVMNCNGHG---ADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLV 463

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            + + Y+ +ING+   GD  +AF++F  M+K G  P   TY +LL  LCK G L EA  F
Sbjct: 464 PNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKF 523

Query: 354 YGVLS-------------------KTG----------------VAPDQISYKTIIQGLCI 378
              L                    K+G                V PD  +Y +++ GLC 
Sbjct: 524 LNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCR 583

Query: 379 HGDIVKAR-EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
            G  V A   F  +M   ++ P   ++  ++DG  + G    AF   + M+  G   +  
Sbjct: 584 KGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTV 643

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            FNA+I + +R G +  A      M   G+ P++ TYN+L+        +   L LY  M
Sbjct: 644 AFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTM 703

Query: 498 LRRGITPDIITYTELIKGHCARG 520
           +R GI PD +T+  LI G    G
Sbjct: 704 MREGIFPDKLTFHSLILGLSKSG 726



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 206/448 (45%), Gaps = 27/448 (6%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC+ G +  A  L ++M + G VP ++T+N L+N  CK G  + A  +I  M    
Sbjct: 239 LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 298

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TYN FI   C  +   KA  L   M    I PN VT+N L++   K+G +G A 
Sbjct: 299 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 358

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ---------- 293
           +   E+   D    + + +T   L+  +   GD  +AL L + M    ++          
Sbjct: 359 QVFNEMSKFD---LSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEA 415

Query: 294 -------------TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
                         D    NVL++  C +G +  A  + C M + G +P+ ITY+ ++N 
Sbjct: 416 MKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIING 475

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
               G    A  F+  + K G  P   +Y ++++GLC  G++V+A++FL  +       +
Sbjct: 476 YGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVD 535

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
             ++N ++    + G+L  A ++ D M+   V  + +T+++L+    R G    A  L  
Sbjct: 536 SVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFG 595

Query: 461 EMLLDG-IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
             +  G +FP+   Y  L+      GH   A   ++EM+++G  PD + +  +I     R
Sbjct: 596 TAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRR 655

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           G M +A + F+ ++  G+  +   + IL
Sbjct: 656 GQMMKANDFFSTMRWWGVCPNLATYNIL 683



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 192/441 (43%), Gaps = 49/441 (11%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           MI+ G  P   T+  L+  LCK G+L +A   +  +  +  + +   YN  +   C+   
Sbjct: 492 MIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGN 551

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           L +A+ LF  M  N + P+  T++ L+  LC+KG    AV   G  +    G    + + 
Sbjct: 552 LHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGR--GTLFPNHVM 609

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            T L+D   K G    A   + +M +K    D VA+N +I+     G +  A  +F  M 
Sbjct: 610 YTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR 669

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD-- 381
             G  P++ TYN LL+   K+  L      Y  + + G+ PD++++ ++I GL   G   
Sbjct: 670 WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 729

Query: 382 ----------IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
                     + ++   L  MLE  V+P+   +  +I+G  R GD+  AF ++D M + G
Sbjct: 730 LGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALG 789

Query: 432 VSSN-----------------------------------VFTFNALILAETRGGSIFDAF 456
             S+                                   + TF  L+    R   I +A 
Sbjct: 790 FGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEAL 849

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            LK  M L G+  DV  YN+LI   C  G    A +LY+EM  R + P+I TY  L+   
Sbjct: 850 KLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 909

Query: 517 CARGNMKEAEEVFAKIQTLGL 537
            A  N+ + E++   +Q  GL
Sbjct: 910 SAANNLIQGEKLLTDLQERGL 930



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 206/464 (44%), Gaps = 51/464 (10%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A+ +   M   G   D  T N LV+ LC+ G L +A+  +  MS +   PN  TY
Sbjct: 410 GNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITY 469

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           +  I GY  + +   A   F  M   G  P+  T+  L+  LCK G L +A KFL  +  
Sbjct: 470 DCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHY 529

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                A   V+ +T+L ++  K+G+  +A+AL++ M Q N+  D   Y+ L+ G C  G 
Sbjct: 530 IPG--AVDSVMYNTLLAET-CKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 586

Query: 312 ISSAFAYFCQMLKRGFL-PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
             +A   F   + RG L P+ + Y  L++ L K G    A +F+  + K G  PD +++ 
Sbjct: 587 AVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFN 646

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            II      G ++KA +F  +M    V P    +N+++ G+ +   L    S+   M+  
Sbjct: 647 AIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMRE 706

Query: 431 GVSSNVFTFNALILAETRGGS------------IFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           G+  +  TF++LIL  ++ G             + ++  +  EML +G+ P    Y  LI
Sbjct: 707 GIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLI 766

Query: 479 GASCNLGHIHLALQLYDE-----------------------------------MLRRGIT 503
              C +G I  A +L DE                                   MLR  + 
Sbjct: 767 NGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLL 826

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           P I T+T L+   C    + EA ++   ++  GL +D + + +L
Sbjct: 827 PTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVL 870



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 198/424 (46%), Gaps = 23/424 (5%)

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
           ++P V   + L+    K G ++ A      +  +   P+  T N  +    +    +   
Sbjct: 161 SIPSVF--DLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVW 218

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
            LF  M++ GI PN  T NIL++ LC +G L  A   L ++   ++      ++T   L+
Sbjct: 219 SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQM---EENGFVPTIVTYNTLL 275

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           + Y K G    A+ L + M  K I+ D+  YNV I+  C N   + A+    +M K    
Sbjct: 276 NWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMIS 335

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+ +TYNTL+N   K+GK+  A+  +  +SK  ++P+ ++Y  +I G C  GD  +A   
Sbjct: 336 PNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRL 395

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  M    +    H            G+++ A  +  +M   G  ++ FT N L+ +  R
Sbjct: 396 LDHMEAAGLRLNEH------------GNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCR 443

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G + +A      M   G+ P+  TY+ +I    ++G    A   +D+M++ G  P   T
Sbjct: 444 DGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFT 503

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           Y  L+KG C  GN+ EA++   ++  +  A+D + +  L      + E+ K+ ++H+   
Sbjct: 504 YGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTL------LAETCKSGNLHEAVA 557

Query: 569 LRNK 572
           L +K
Sbjct: 558 LFDK 561



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 147/316 (46%), Gaps = 9/316 (2%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R TL  ++  +  ++  L   G    A +   +M++KGT PD +  N +++   + G + 
Sbjct: 600 RGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMM 659

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           KA+     M      PN ATYN  + G+ +   L + L L+STM   GI P+++T + L+
Sbjct: 660 KANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLI 719

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI---------LMDSYFKNGDKFQAL 281
             L K G+    VK LG+++ ++      +++ + +         L++   + GD   A 
Sbjct: 720 LGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAF 779

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            L ++M      +  VA + ++ G    G    A      ML+   LP + T+ TL++  
Sbjct: 780 KLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRF 839

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           C+  K+ EA    GV+   G+  D ++Y  +I G+C +GD   A E    M  + + P  
Sbjct: 840 CRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNI 899

Query: 402 HIWNVIIDGYGRCGDL 417
             + V++D      +L
Sbjct: 900 TTYAVLVDAISAANNL 915



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 4/182 (2%)

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE--PHIWNVIIDGYGRCGDLSNAFSIRD 425
           S K+I++ LC  G  + ++    ++++   +    P +++++I  Y + G +  A    +
Sbjct: 130 SAKSILRHLCQMG--IGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFE 187

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
           L+   G   +V+T N ++ +  +       +SL +EM   GI P+V T+N+LI   C  G
Sbjct: 188 LVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEG 247

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           ++  A  L  +M   G  P I+TY  L+  +C +G  K A E+   +   G+  D   + 
Sbjct: 248 NLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYN 307

Query: 546 IL 547
           + 
Sbjct: 308 VF 309



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 29/186 (15%)

Query: 382 IVKAREF-----LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           +VKAR +     +L  L +  +    I+  ++D Y  C  + + F +             
Sbjct: 122 LVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDL------------- 168

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
                LI    + G I  A    + + L G  P V+T N+++ +        L   L+ E
Sbjct: 169 -----LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 223

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL------KKR 550
           M  +GI P++ T+  LI G C  GN+K+A  +  +++  G     + +  L      K R
Sbjct: 224 MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 283

Query: 551 YRRMKE 556
           Y+   E
Sbjct: 284 YKAAIE 289


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 198/380 (52%), Gaps = 9/380 (2%)

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
           ++ ++MI++   P+V T N ++N LCK G + KA  V+ +M     SPN  +YN  I GY
Sbjct: 209 YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGY 268

Query: 199 CRV---NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
           C++    ++ KA  +   M  N + PN  T NIL+    K   L  ++K   E+L  D  
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD-- 326

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               +VI+   L++     G   +A+++ + M    +Q +++ YN LINGFC N  +  A
Sbjct: 327 -VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F  +  +G +P    YN L++  CK GK+D+       + + G+ PD  +Y  +I G
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           LC +G+I  A++ L   L    +P+   ++++++GY R G+   A  +   M   G+   
Sbjct: 446 LCRNGNIEAAKK-LFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNLGHIHLALQLY 494
             T+N ++    + G++  A +++ +M  +  +  +V +YN+L+      G +  A  L 
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564

Query: 495 DEMLRRGITPDIITYTELIK 514
           +EML +G+ P+ ITY E++K
Sbjct: 565 NEMLEKGLVPNRITY-EIVK 583



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 199/387 (51%), Gaps = 24/387 (6%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI---GDLEKADHVIREMS 180
           VI  LC  GK+  A  +   M   G  P+V+++N L++  CK+   G + KAD V++EM 
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   SPN  T+N  I G+ + + L  ++ +F  M +  ++PN +++N L++ LC  G + 
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+    ++++        ++IT   L++ + KN    +AL ++  +  +        YN
Sbjct: 349 EAISMRDKMVS---AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI+ +C  G I   FA   +M + G +PDV TYN L+  LC+ G ++ A   +  L+  
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ PD +++  +++G C  G+  KA   L  M +  + P    +N+++ GY + G+L  A
Sbjct: 466 GL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524

Query: 421 FSIRDLM-LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
            ++R  M     +  NV ++N L+   ++ G + DA  L  EML  G+ P+  TY +   
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEI--- 581

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDI 506
                        + +EM+ +G  PDI
Sbjct: 582 -------------VKEEMVDQGFVPDI 595



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 194/382 (50%), Gaps = 8/382 (2%)

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
           ++V +EM   +  PN  T+N  I   C+  +++KA  +   M   G  PN V++N L+  
Sbjct: 208 EYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDG 267

Query: 233 LCKKGLLGDAVK---FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
            CK G  G   K    L E++ +D    + ++ T  IL+D ++K+ +   ++ ++ +M  
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVEND---VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLD 324

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           ++++ ++++YN LING C  G IS A +   +M+  G  P++ITYN L+N  CK   L E
Sbjct: 325 QDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKE 384

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A   +G +   G  P    Y  +I   C  G I         M  + +VP+   +N +I 
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G  R G++  A  + D + S G+  ++ TF+ L+    R G    A  L KEM   G+ P
Sbjct: 445 GLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLR-RGITPDIITYTELIKGHCARGNMKEAEEV 528
              TYN+++   C  G++  A  +  +M + R +  ++ +Y  L++G+  +G +++A  +
Sbjct: 504 RHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANML 563

Query: 529 FAKIQTLGLAIDHIPFRILKKR 550
             ++   GL  + I + I+K+ 
Sbjct: 564 LNEMLEKGLVPNRITYEIVKEE 585



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 153/297 (51%), Gaps = 4/297 (1%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           LM +  K         ++ +M ++ IQ ++  +NV+IN  C  G ++ A      M   G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 327 FLPDVITYNTLLNCLCK---QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             P+V++YNTL++  CK    GK+ +A      + +  V+P+  ++  +I G     ++ 
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            + +    ML++ V P    +N +I+G    G +S A S+RD M+S GV  N+ T+NALI
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               +   + +A  +   +   G  P    YN+LI A C LG I     L +EM R GI 
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           PD+ TY  LI G C  GN++ A+++F ++ + GL  D + F IL + Y R  ES KA
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKA 489



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 154/300 (51%), Gaps = 27/300 (9%)

Query: 114 LETDYRRHV----AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           L+ D + +V    ++I  LC GGKI  A+ +R KM+  G  P+++T+N L+N  CK   L
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  +   +      P    YN  I  YC++ ++D    L   M   GI P+  T+N L
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LC+ G +  A K   ++ +    K   D++T  ILM+ Y + G+  +A  L  +M +
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTS----KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSK 498

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLD 348
             ++   + YN+++ G+C  G++ +A     QM K R    +V +YN LL    ++GKL+
Sbjct: 499 MGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLE 558

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP--EPHIWNV 406
           +A+     + + G+ P++I+Y           +IVK       M+++  VP  E H++NV
Sbjct: 559 DANMLLNEMLEKGLVPNRITY-----------EIVKEE-----MVDQGFVPDIEGHLFNV 602



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 133/274 (48%), Gaps = 4/274 (1%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            +D + +NG   Q  ++++ +    N+  + +  ++L+  +  N      F  F +    
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYY 182

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G+    ++   L+  L K+ +  +  + Y  + +  + P+  ++  +I  LC  G + KA
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGY---GRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
           R+ +  M      P    +N +IDGY   G  G +  A ++   M+   VS N+ TFN L
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    +  ++  +  + KEML   + P+V +YN LI   CN G I  A+ + D+M+  G+
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            P++ITY  LI G C    +KEA ++F  ++  G
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 119/239 (49%), Gaps = 24/239 (10%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +LKE LD   +++  G V  T     R +  +I   C  GKI     L+ +M ++G VPD
Sbjct: 381 MLKEALDMFGSVKGQGAVPTT-----RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD 435

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V T+N L+  LC+ G++E A  +  +++  +  P+  T++  + GYCR  E  KA  L  
Sbjct: 436 VGTYNCLIAGLCRNGNIEAAKKLFDQLTS-KGLPDLVTFHILMEGYCRKGESRKAAMLLK 494

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M+  G++P  +T+NI++   CK+G L  A     ++  + + +   +V +  +L+  Y 
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM--EKERRLRMNVASYNVLLQGYS 552

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
           + G    A  L N+M +K +  + + Y ++                  +M+ +GF+PD+
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITYEIVKE----------------EMVDQGFVPDI 595



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 3/121 (2%)

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
           +G   +  +   L++A  +     D   + KEM+   I P+VFT+N++I A C  G ++ 
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHC---ARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           A  + ++M   G +P++++Y  LI G+C     G M +A+ V  ++    ++ +   F I
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301

Query: 547 L 547
           L
Sbjct: 302 L 302


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 207/426 (48%), Gaps = 4/426 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI+ L    +   A+ L + ++  G VPDV T+  L++ LCK   L +A ++  +M E  
Sbjct: 367 VIKGLLRDKRWKDAIGLLKLVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAG 425

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY++ + GYC    +D+AL L+S M + G  PN VT+  L+    KK    +A 
Sbjct: 426 VKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAY 485

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E+    +G +  D  T  IL++  +      +   +      +      + YN +I
Sbjct: 486 ALLNEM--RQNGVSCGD-YTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSII 542

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NGF   G + SAF  + QM K+G  P+++TY + ++  C+    D A      + + G+ 
Sbjct: 543 NGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQ 602

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y   I   C  G++ +A  FL+ +L+  + P+  ++N  + GY     ++ A   
Sbjct: 603 PDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKF 662

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+   V ++   +  LI   ++ G++  A  L  EM+ + + PD  T+  L    C 
Sbjct: 663 YYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCR 722

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G I  A +L D+M R  ++P+I+TY  LI      G ++EA ++  ++ + G+  D   
Sbjct: 723 SGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTT 782

Query: 544 FRILKK 549
           + IL +
Sbjct: 783 YDILPR 788



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 205/427 (48%), Gaps = 4/427 (0%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R+MI++G +P     N ++  L +    + A  +++ + +    P+  TY   I   C+ 
Sbjct: 350 RQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTG-VPDVFTYGCLIHWLCKH 408

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            +L +A++L+  M   G++P+ VT++ L+   C+KG + +A+K   E+   D G   ++V
Sbjct: 409 QKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEM--PDKGFPPNEV 466

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
            T T LM  Y K      A AL N+M Q  +      YN+LING  +   +        +
Sbjct: 467 -TYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKR 525

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
            L  GF+P  +TYN+++N   K G +  A   Y  + K G+ P+ ++Y + I G C    
Sbjct: 526 FLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNC 585

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
              A + L+ +    + P+   +N  ID + + G++S A     L+L  G++ +V  +N+
Sbjct: 586 CDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNS 645

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
            +        + +A      M+   +  D   Y  LI     +G++  AL+LY EM+   
Sbjct: 646 FVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANH 705

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
           + PD  T+T L  G C  G++  A+ +   ++ L ++ + + + +L     R  +  +A 
Sbjct: 706 VIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAF 765

Query: 562 DIHQKWL 568
            +H + L
Sbjct: 766 QLHDEML 772



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 193/435 (44%), Gaps = 36/435 (8%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D +    ++    LG     AL L  +M  KG   D   ++ ++    + G    A  + 
Sbjct: 149 DAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLF 208

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM+     P+   Y   I+G C++ + D+AL +   M   G  P  +T++ +V  L K 
Sbjct: 209 DEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKV 268

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             + +A++   ++L     K   DV+ +T+LM  Y  NG+  +AL L++++    +    
Sbjct: 269 RRMDEALRLKDQMLLATGKKM--DVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTN 326

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFL---------------------------- 328
           V Y VLI G    G     +    QM+++G L                            
Sbjct: 327 VTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKL 386

Query: 329 ------PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
                 PDV TY  L++ LCK  KL EA + +  + + GV P  ++Y +++ G C  G +
Sbjct: 387 VVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRM 446

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A +    M +K   P    +  ++ GY +     NA+++ + M   GVS   +T+N L
Sbjct: 447 DEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNIL 506

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I        + +   + K  L +G  P   TYN +I      G +  A  +Y +M ++GI
Sbjct: 507 INGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGI 566

Query: 503 TPDIITYTELIKGHC 517
           TP+I+TYT  I G+C
Sbjct: 567 TPNIVTYTSFIDGYC 581



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 200/451 (44%), Gaps = 38/451 (8%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D R +   I  LC       AL +  KM + G  P  LT++ +V+ L K+    + D
Sbjct: 216 VKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKV---RRMD 272

Query: 174 HVIREMSEMRPSP----NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             +R   +M  +     +       + GYC   E+ KAL LF  + ++G+ P  VT+ +L
Sbjct: 273 EALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVL 332

Query: 230 V------------HALCK----KGLLGDAVKF---LGEVLADDDGK------------AT 258
           +            + LC+    +GLL    +F   +  +L D   K              
Sbjct: 333 IKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV 392

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            DV T   L+    K+    +A+ LW+ M +  ++  IV Y+ L+ G+C  G +  A   
Sbjct: 393 PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKL 452

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           + +M  +GF P+ +TY TL+    K+   D A      + + GV+    +Y  +I GL +
Sbjct: 453 YSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYM 512

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
              + +  E L   L +  VP    +N II+G+ + G + +AF +   M   G++ N+ T
Sbjct: 513 VNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVT 572

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           + + I    R      A  L   +  DGI PD+  YN  I   C  G++  AL     +L
Sbjct: 573 YTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLL 632

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           + G+TPD+  Y   + G+     M EA + +
Sbjct: 633 KDGLTPDVTVYNSFVTGYKNLKMMAEASKFY 663



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 132/347 (38%), Gaps = 70/347 (20%)

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           ++ M  + +  D  +   L+    L    + A   F +M  +G   D   Y+ ++    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G   +A   +  ++  GV PD+  Y   I GLC   D  +A + L  M E    P    
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 404 WNVIID------------------------------------GYGRCGDLSNAFSIRDLM 427
           ++ ++D                                    GY   G++  A  + D +
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF------------------- 468
           +S GV+    T+  LI      G   + + L ++M+  G+                    
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRW 377

Query: 469 ---------------PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
                          PDVFTY  LI   C    +H A+ L+D+M   G+ P I+TY  L+
Sbjct: 378 KDAIGLLKLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            G+C +G M EA ++++++   G   + + +  L K Y + K  D A
Sbjct: 438 LGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNA 484



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 90/227 (39%), Gaps = 38/227 (16%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  ++ D   + A I   C  G +  AL     +++ G  PDV  +N  V     +  + 
Sbjct: 598 RDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMA 657

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A      M + R   +   Y   I G+ +V  +  AL L+S M  N + P+  T   L 
Sbjct: 658 EASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALT 717

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           H LC+ G              D DG                        A  L +DM + 
Sbjct: 718 HGLCRSG--------------DIDG------------------------AKRLLDDMRRL 739

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
           ++  +IV YN+LIN    +G +  AF    +ML  G +PD  TY+ L
Sbjct: 740 DVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 5/140 (3%)

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M++ GV  +  +   L++    G S  DA +L  EM   G + D   Y+++I A C  G 
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRA-CVRGG 199

Query: 487 IHL-ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           +H  A++L+DEM   G+ PD   Y   I G C   +   A +V  K++  G     + + 
Sbjct: 200 MHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYS 259

Query: 546 ILKK---RYRRMKESDKARD 562
            +     + RRM E+ + +D
Sbjct: 260 SVVDVLVKVRRMDEALRLKD 279


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 213/446 (47%), Gaps = 18/446 (4%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL +  +M++    PDV+T+  L++ LCK    + A  +  EM++    PN   Y+  ++
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLS 241

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C+  ++  A  LFS M  +G   + +T+N+L++  CK G L DA   L   L   DG 
Sbjct: 242 GLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQ--LLTKDGH 299

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
               VI    L++  F+     +A   +  M ++NI+ D++ Y ++I G    G ++ A 
Sbjct: 300 ILG-VIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEAL 358

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M +RG  PD I YN L+   C  G LDEA      +SK    P+  +Y  +I G+
Sbjct: 359 TLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGM 418

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA---FSIRD-------- 425
           C +G I KA+     M +   +P    +N +I+G  +   L  A   F   +        
Sbjct: 419 CKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLF 478

Query: 426 LMLSFGVSSNVFTFNALILAETR---GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           L LS G +  VF   +L +   R    G I  A+ L  +++  G+ PD+ TYN+LI   C
Sbjct: 479 LRLSQG-TDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFC 537

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G+I+ A +L+ EM  +G  PD +TY  LI G    G  ++A E+F ++   G   +  
Sbjct: 538 KFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESS 597

Query: 543 PFRILKKRYRRMKESDKARDIHQKWL 568
            ++ +     R      A  +  K+L
Sbjct: 598 TYKTIMTWSCRENNISLALSVWMKYL 623



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 181/379 (47%), Gaps = 3/379 (0%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
             + ++ +L K    E    V++E+       +   ++  I  Y      +KA+  FS M
Sbjct: 95  VQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLM 154

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            +   +P+    N+++H L +K     A+    ++L  +      DV+T  IL+    K 
Sbjct: 155 RDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCN---LNPDVVTYGILIHGLCKT 211

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
                AL L+++M  + I  + + Y+++++G C    I  A   F +M   G   D+ITY
Sbjct: 212 CKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITY 271

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N LLN  CK G LD+A     +L+K G     I Y  +I GL       +A  +   ML 
Sbjct: 272 NVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           +++ P+  ++ ++I G  + G ++ A ++   M   G+  +   +NALI      G + +
Sbjct: 332 ENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDE 391

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A SL+ E+     FP+  TY++LI   C  G I+ A  ++ EM + G  P ++T+  LI 
Sbjct: 392 AESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLIN 451

Query: 515 GHCARGNMKEAEEVFAKIQ 533
           G C    ++EA  +F +++
Sbjct: 452 GLCKANRLEEARLLFYQME 470



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 148/287 (51%), Gaps = 12/287 (4%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  ++ D   +  +IR L   G++  AL L  +M ++G  PD + +N L+   C +G L
Sbjct: 330 LRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYL 389

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A+ +  E+S+    PN  TY+  I G C+   ++KA H+F  M   G  P+ VT N L
Sbjct: 390 DEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSL 449

Query: 230 VHALCKKGLLGDAVKFLGEV-----------LADDDGKATSDVITSTILMDSYFKNGDKF 278
           ++ LCK   L +A     ++           L+    K   D+ +  ++M+   ++G   
Sbjct: 450 INGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVF-DIASLQVMMERLCESGMIL 508

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A  L   +    +  DI  YN+LINGFC  G+I+ AF  F +M  +G +PD +TY TL+
Sbjct: 509 KAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLI 568

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           + L + G+ ++A   +  + K G  P+  +YKTI+   C   +I  A
Sbjct: 569 DGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLA 615



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 120/267 (44%)

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
           A++VLI  +   G    A   F  M      PD+  +N +L+ L ++     A   Y  +
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQM 189

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
            K  + PD ++Y  +I GLC       A      M ++ ++P   I+++++ G  +   +
Sbjct: 190 LKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
            +A  +   M + G + ++ T+N L+    + G + DAF+L + +  DG    V  Y  L
Sbjct: 250 FDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCL 309

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I           A   Y +MLR  I PD++ YT +I+G    G + EA  +  ++   GL
Sbjct: 310 INGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGL 369

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIH 564
             D I +  L K +  M   D+A  + 
Sbjct: 370 RPDTICYNALIKGFCDMGYLDEAESLR 396



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 7/181 (3%)

Query: 373 IQGLCIHGDIVKAREF-----LLSMLEKSVVP-EPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           +Q L I G ++K   F     +L  L+ S +      ++V+I+ Y   G    A     L
Sbjct: 95  VQDLII-GKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSL 153

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M  F    ++F FN ++    R  +   A ++  +ML   + PDV TY +LI   C    
Sbjct: 154 MRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCK 213

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
              AL L+DEM  RGI P+ I Y+ ++ G C    + +A+ +F+K++  G   D I + +
Sbjct: 214 TQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273

Query: 547 L 547
           L
Sbjct: 274 L 274



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 85/395 (21%), Positives = 147/395 (37%), Gaps = 90/395 (22%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E L  L  M + G     L  D   + A+I+  C  G +  A  LR ++ +    P+  T
Sbjct: 356 EALTLLGEMTERG-----LRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHT 410

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM- 214
           ++ L+  +CK G + KA H+ +EM ++   P+  T+N+ I G C+ N L++A  LF  M 
Sbjct: 411 YSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQME 470

Query: 215 -----------------------------------------------ANNGIRPNRVTHN 227
                                                           ++G+ P+  T+N
Sbjct: 471 IVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYN 530

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           IL++  CK G +  A K   E+          D +T   L+D  ++ G    AL ++  M
Sbjct: 531 ILINGFCKFGNINGAFKLFKEMQLKGH---MPDSVTYGTLIDGLYRAGRNEDALEIFEQM 587

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK--RGFLP---------------- 329
            +K    +   Y  ++   C   +IS A + + + L+  RG+                  
Sbjct: 588 VKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQ 647

Query: 330 ----------------DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
                           D+  Y   L  L +  +  EA   + VL    +     S   +I
Sbjct: 648 TAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLI 707

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
             LC+  ++  A +  L  LE+     P I N ++
Sbjct: 708 GRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLL 742


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 203/414 (49%), Gaps = 18/414 (4%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL +  +M++    PDV+T+  L++ LCK    + A  +  EM++    PN   Y+  ++
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLS 241

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C+  ++  A  LFS M  +G   + +T+N+L++  CK G L DA   L   L   DG 
Sbjct: 242 GLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQ--LLTKDGH 299

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
               VI    L++  F+     +A   +  M ++NI+ D++ Y ++I G    G ++ A 
Sbjct: 300 ILG-VIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEAL 358

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M +RG  PD I YN L+   C  G LDEA      +SK    P+  +Y  +I G+
Sbjct: 359 TLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGM 418

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA---FSIRD-------- 425
           C +G I KA+     M +   +P    +N +I+G  +   L  A   F   +        
Sbjct: 419 CKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLF 478

Query: 426 LMLSFGVSSNVFTFNALILAETR---GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           L LS G +  VF   +L +   R    G I  A+ L  +++  G+ PD+ TYN+LI   C
Sbjct: 479 LRLSQG-TDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFC 537

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
             G+I+ A +L+ EM  +G  PD +TY  LI G    G  ++A E+F ++   G
Sbjct: 538 KFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKG 591



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 181/381 (47%), Gaps = 3/381 (0%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
             + ++ +L K    E    V++E+       +   ++  I  Y      +KA+  F  M
Sbjct: 95  VQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLM 154

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            +   +P+    N+++H L +K     A+    ++L  +      DV+T  IL+    K 
Sbjct: 155 RDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCN---LNPDVVTYGILIHGLCKT 211

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
                AL L+++M  + I  + + Y+++++G C    I  A   F +M   G   D+ITY
Sbjct: 212 CKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITY 271

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N LLN  CK G LD+A     +L+K G     I Y  +I GL       +A  +   ML 
Sbjct: 272 NVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           +++ P+  ++ ++I G  + G ++ A ++   M   G+  +   +NALI      G + +
Sbjct: 332 ENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDE 391

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A SL+ E+     FP+  TY++LI   C  G I+ A  ++ EM + G  P ++T+  LI 
Sbjct: 392 AESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLIN 451

Query: 515 GHCARGNMKEAEEVFAKIQTL 535
           G C    ++EA  +F +++ +
Sbjct: 452 GLCKANRLEEARLLFYQMEIV 472



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 194/409 (47%), Gaps = 25/409 (6%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  ++ D   +  +IR L   G++  AL L  +M ++G  PD + +N L+   C +G L
Sbjct: 330 LRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYL 389

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A+ +  E+S+    PN  TY+  I G C+   ++KA H+F  M   G  P+ VT N L
Sbjct: 390 DEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSL 449

Query: 230 VHALCKKGLLGDAVKFLGEV-----------LADDDGKATSDVITSTILMDSYFKNGDKF 278
           ++ LCK   L +A     ++           L+    K   D+ +  ++M+   ++G   
Sbjct: 450 INGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVF-DIASLQVMMERLCESGMIL 508

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A  L   +    +  DI  YN+LINGFC  G+I+ AF  F +M  +G +PD +TY TL+
Sbjct: 509 KAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLI 568

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           + L + G+ ++A   +  + K G  P+  +YKTI+   C   +I  A    +  L     
Sbjct: 569 DGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRG 628

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF------TFNALILAETRGGSI 452
            E     V+ + +    +L  A  IR L L   + S  F       F   ++   R    
Sbjct: 629 WEDEKVRVVAESFDN-EELQTA--IRRL-LEMDIKSKNFDLAPYTIFLIGLVQAKRDCEA 684

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           F  FS+ K+  ++       +  +LIG  C + ++ +A+ ++   L RG
Sbjct: 685 FAIFSVLKDFKMN---ISSASCVMLIGRLCMVENLDMAMDVFLFTLERG 730



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 120/266 (45%)

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
           A++VLI  +   G    A   F  M      PD+  +N +L+ L ++     A   Y  +
Sbjct: 130 AFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQM 189

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
            K  + PD ++Y  +I GLC       A      M ++ ++P   I+++++ G  +   +
Sbjct: 190 LKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
            +A  +   M + G + ++ T+N L+    + G + DAF+L + +  DG    V  Y  L
Sbjct: 250 FDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCL 309

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I           A   Y +MLR  I PD++ YT +I+G    G + EA  +  ++   GL
Sbjct: 310 INGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGL 369

Query: 538 AIDHIPFRILKKRYRRMKESDKARDI 563
             D I +  L K +  M   D+A  +
Sbjct: 370 RPDTICYNALIKGFCDMGYLDEAESL 395



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 7/181 (3%)

Query: 373 IQGLCIHGDIVKAREF-----LLSMLEKSVVP-EPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           +Q L I G ++K   F     +L  L+ S +      ++V+I+ Y   G    A     L
Sbjct: 95  VQDLII-GKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGL 153

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M  F    ++F FN ++    R  +   A ++  +ML   + PDV TY +LI   C    
Sbjct: 154 MRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCK 213

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
              AL L+DEM  RGI P+ I Y+ ++ G C    + +A+ +F+K++  G   D I + +
Sbjct: 214 TQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273

Query: 547 L 547
           L
Sbjct: 274 L 274



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 85/395 (21%), Positives = 147/395 (37%), Gaps = 90/395 (22%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E L  L  M + G     L  D   + A+I+  C  G +  A  LR ++ +    P+  T
Sbjct: 356 EALTLLGEMTERG-----LRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHT 410

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM- 214
           ++ L+  +CK G + KA H+ +EM ++   P+  T+N+ I G C+ N L++A  LF  M 
Sbjct: 411 YSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQME 470

Query: 215 -----------------------------------------------ANNGIRPNRVTHN 227
                                                           ++G+ P+  T+N
Sbjct: 471 IVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYN 530

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           IL++  CK G +  A K   E+          D +T   L+D  ++ G    AL ++  M
Sbjct: 531 ILINGFCKFGNINGAFKLFKEMQLKGH---MPDSVTYGTLIDGLYRAGRNEDALEIFEQM 587

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK--RGFLP---------------- 329
            +K    +   Y  ++   C   +IS A + + + L+  RG+                  
Sbjct: 588 VKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQ 647

Query: 330 ----------------DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
                           D+  Y   L  L +  +  EA   + VL    +     S   +I
Sbjct: 648 TAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLI 707

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
             LC+  ++  A +  L  LE+     P I N ++
Sbjct: 708 GRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLL 742


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 192/388 (49%), Gaps = 3/388 (0%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
           V DV +   ++   C+ G++EK+  ++ E+ E   SPN   Y   I G C+  E++KA  
Sbjct: 160 VLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           LF  M   G+  N  T+ +L+H L K G+     +   ++    +     ++ T   +M+
Sbjct: 220 LFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM---QEHGVFPNLYTYNCVMN 276

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K+G    A  ++++M ++ +  +IV YN LI G C     + A     QM      P
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINP 336

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           ++ITYNTL++  C  GKL +A      L   G++P  ++Y  ++ G C  GD   A + +
Sbjct: 337 NLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMV 396

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M E+ + P    + ++ID + R  ++  A  +R  M   G+  +V T++ LI      
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIK 456

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + +A  L K M+   + P+   YN +I   C  G  + AL+L+ +M  + + P++ +Y
Sbjct: 457 GQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASY 516

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGL 537
           + LI+  C    +KEAE++  K+   G+
Sbjct: 517 SYLIRVLCKERKLKEAEDLVEKMIDSGI 544



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 187/383 (48%), Gaps = 5/383 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI+  C  G+I  +  L  ++ + G  P+V+ +  L++  CK G++EKA  +  EM +  
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  TY   I G  +     +   ++  M  +G+ PN  T+N +++ LCK G   DA 
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAF 288

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K   E+    +   + +++T   L+    +     +A  + + M    I  +++ YN LI
Sbjct: 289 KVFDEM---RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLI 345

Query: 304 NGFCLNGDISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +GFC  G +  A +  C+ LK RG  P ++TYN L++  C++G    A+     + + G+
Sbjct: 346 DGFCSVGKLGKALS-LCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGI 404

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P +++Y  +I       ++  A +   SM E  +VP+ H ++V+I G+   G ++ A  
Sbjct: 405 KPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M+   +  N   +N +IL   + GS + A  L ++M    + P+V +Y+ LI   C
Sbjct: 465 LFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLC 524

Query: 483 NLGHIHLALQLYDEMLRRGITPD 505
               +  A  L ++M+  GI P 
Sbjct: 525 KERKLKEAEDLVEKMIDSGIDPS 547



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 162/340 (47%), Gaps = 5/340 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  L   G       +  KM + G  P++ T+N ++N+LCK G  + A  V  EM 
Sbjct: 236 YTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMR 295

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   S N  TYN  I G CR  + ++A  +   M +  I PN +T+N L+   C  G LG
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLG 355

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A+    ++ +      +  ++T  +L+  + + GD   A  +  +M ++ I+   V Y 
Sbjct: 356 KALSLCRDLKSRG---LSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYT 412

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI+ F  + ++ +A      M + G +PDV TY+ L++  C +G+++EAS  +  + + 
Sbjct: 413 ILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            + P+++ Y T+I G C  G   +A      M EK + P    ++ +I    +   L  A
Sbjct: 473 MLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEA 532

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRG--GSIFDAFSL 458
             + + M+  G+  +    N +  A+T      I DA S 
Sbjct: 533 EDLVEKMIDSGIDPSDTICNLISRAKTDSPVAQIIDASSF 572



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLET-----DYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           IL +   R   M     +R ++E      D   +  +I   C+ G++  A  L + M++K
Sbjct: 413 ILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
              P+ + +N ++   CK G   +A  + R+M E   +PN A+Y+  I   C+  +L +A
Sbjct: 473 MLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEA 532

Query: 208 LHLFSTMANNGIRPNRVTHNILVHA 232
             L   M ++GI P+    N++  A
Sbjct: 533 EDLVEKMIDSGIDPSDTICNLISRA 557


>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
 gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
          Length = 413

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 194/399 (48%), Gaps = 4/399 (1%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREM-SEMRPSPNCATYNAFITGYCRVNELDKAL 208
            PDV+ +N L+   CK GD ++A  + R +  E    PN  +++  +   C+++    AL
Sbjct: 8   APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 67

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
            +F  M   G++ +    N L+H  C+ G+L  A + L  + A        DV T + LM
Sbjct: 68  AVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAH---AFVLDVFTYSYLM 124

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           D+  K G   +AL ++++M +     D V YNVLI+     G +  A      M ++G +
Sbjct: 125 DALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIM 184

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           PD  TYN +++ L   G+ ++A  F+G++ +   +PD ++Y T++ GL       +A + 
Sbjct: 185 PDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDL 244

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              M     +P+   +  +ID   + G + +A      ++  G   N + +NALI    R
Sbjct: 245 FDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCR 304

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G +   + L ++M+    FPD  TY +L+      GH  +A++L  EM+R G TP + T
Sbjct: 305 SGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALAT 364

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           Y  LI+     G +++A  +F ++   G   D   +  L
Sbjct: 365 YNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 174/385 (45%), Gaps = 38/385 (9%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC   +   AL + ++M+  G   DV   N L++  C++G L +A  ++  M+      +
Sbjct: 57  LCKMSRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLD 116

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY+  +    +     KAL +FS M   G  P+ V +N+L+  L K+G +        
Sbjct: 117 VFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVD------- 169

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
                                          +AL L  DM +K I  D   YN++I+   
Sbjct: 170 -------------------------------EALELLEDMNRKGIMPDCRTYNIVIDVLS 198

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G    A+++F  M +R   PDV+TYNTLLN L K  + DEA   +  +      PD  
Sbjct: 199 SCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLT 258

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           ++ T+I  L   G +  A E    +++   VP  +I+N +I G+ R G +   + +   M
Sbjct: 259 TFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDM 318

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +      +  T+  L+L  +R G    A  L +EM+ +G  P + TYN+LI +    G +
Sbjct: 319 IECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQV 378

Query: 488 HLALQLYDEMLRRGITPDIITYTEL 512
             A  L+ EM+ +G  PD+ TY+ L
Sbjct: 379 EDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 162/385 (42%), Gaps = 39/385 (10%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGDAV 243
           +P+   YN  I GYC+  + D+AL +F  +   G  +PN V+ + LV  LCK     DA 
Sbjct: 8   APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA- 66

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
                                                LA++ +M    +Q D+   N LI
Sbjct: 67  -------------------------------------LAVFQEMLGAGLQADVNVCNTLI 89

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G +  A      M    F+ DV TY+ L++ L K G+  +A   +  + K G  
Sbjct: 90  HCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCM 149

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD + Y  +I  L   G + +A E L  M  K ++P+   +N++ID    CG    A+S 
Sbjct: 150 PDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSF 209

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
             +M     S +V T+N L+    +     +A  L  EM  +   PD+ T+  LI     
Sbjct: 210 FGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAK 269

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  AL+    +++ G  P+   Y  LI G C  G + +  E+F  +       D I 
Sbjct: 270 AGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSIT 329

Query: 544 FRILKKRYRRMKESDKARDIHQKWL 568
           + IL   + R   +  A ++ Q+ +
Sbjct: 330 YTILVLGFSRRGHTSMAMELLQEMV 354



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 149/329 (45%), Gaps = 3/329 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D      +I   C  G +  A  L   M     V DV T++YL++ L K G   KA 
Sbjct: 78  LQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKAL 137

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V   M +    P+   YN  I+   +  ++D+AL L   M   GI P+  T+NI++  L
Sbjct: 138 EVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVL 197

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
              G    A  F G +      K + DV+T   L++   K     +A  L+++M      
Sbjct: 198 SSCGRYEKAYSFFGMM---KRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCM 254

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+  +  LI+     G +  A     +++K G +P+   YN L++  C+ G++D+    
Sbjct: 255 PDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYEL 314

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  + +    PD I+Y  ++ G    G    A E L  M+ +   P    +NV+I     
Sbjct: 315 FQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSM 374

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            G + +A+++   M++ G + ++ T++AL
Sbjct: 375 AGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score = 39.3 bits (90), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 21/85 (24%), Positives = 41/85 (48%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           + C+   D   +  ++      G    A+ L ++M+++G  P + T+N L+  L   G +
Sbjct: 319 IECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQV 378

Query: 170 EKADHVIREMSEMRPSPNCATYNAF 194
           E A  + +EM     +P+  TY+A 
Sbjct: 379 EDAYTLFKEMIAKGFNPDMQTYSAL 403


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 218/487 (44%), Gaps = 37/487 (7%)

Query: 114 LETDYRRHVAVI----RDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           L+T +R +  VI    + LC G ++G A+  L ++M + G  PD ++++ L+   C    
Sbjct: 125 LKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENR 184

Query: 169 LEKADHVIREMSE---MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
            E+A  ++R M+        PN  TY   I G C+    D+A  +F  M +NG++PN  T
Sbjct: 185 AEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDT 244

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADD-----------------------------DGK 256
           +N L+H     G   + V+ L ++ A                               +  
Sbjct: 245 YNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENG 304

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
            + D     I   +Y K G   +A+ ++N M Q  +  ++V Y  LI+  C  G +  A 
Sbjct: 305 LSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAE 364

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F QM+  G  P+++ +N+L+  LC   K + A      +   G+ P+ + + T+I  L
Sbjct: 365 VKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNL 424

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G +++ R  +  M    V P+   +  +I GY   G    A  + D M+S G+S   
Sbjct: 425 CNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTE 484

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+N L+        I DA+ L +EML  G+ P V TYN ++           A +LY  
Sbjct: 485 VTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLN 544

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M+  G   DI TY  ++ G C    + EA ++F  + + GL ++ I F I+     +   
Sbjct: 545 MINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 604

Query: 557 SDKARDI 563
            + A D+
Sbjct: 605 KEDAMDL 611



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 218/478 (45%), Gaps = 11/478 (2%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           KE +  L+ M   G     L+ D   + +++  LC   ++ + L L   M++ G  PD  
Sbjct: 259 KEVVQMLEKMSARG-----LKPDCYTYGSLLNYLCALSEMHSFLDL---MVENGLSPDHH 310

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
             N   +   K G ++KA  +  +M +   SPN   Y A I   C++  +D A   F+ M
Sbjct: 311 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 370

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            N G+ PN V  N LV+ LC       A + + E+L  D G   + V  +T++ +     
Sbjct: 371 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEML--DQGICPNAVFFNTLICN-LCNV 427

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +   L + M    ++ D  +Y  LI+G+CL G    A   F  M+  G  P  +TY
Sbjct: 428 GRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTY 487

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           NTLL+  C   ++D+A   +  + + GV P  ++Y TI+ GL       +A+E  L+M+ 
Sbjct: 488 NTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMIN 547

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
                + + +N+I++G  +   +  AF +   + S G+  N+ TF  +I A  +GG   D
Sbjct: 548 SGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKED 607

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L   +  +G+ P+V TY L+       G +     L+  M + G  P+      L++
Sbjct: 608 AMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVR 667

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
               RG++  A    +K+     +++     +L   +   +    A+ + +K+   N+
Sbjct: 668 RLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSLPEKYHFLNE 725



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 201/434 (46%), Gaps = 9/434 (2%)

Query: 140 LRRKMIQKGTV---PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           L  +M+++ ++   P+  T++ L+  LC++G L+ +      + +     N    N  + 
Sbjct: 82  LFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLK 141

Query: 197 GYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
           G C    + +A+  L   M   G  P+ V+++IL+   C +    +A++ L  ++A+D G
Sbjct: 142 GLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELL-RMMANDHG 200

Query: 256 KA-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           ++   +V+T T ++D   K     +A  ++  M    ++ +   YN LI+G+   G    
Sbjct: 201 RSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKE 260

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
                 +M  RG  PD  TY +LLN LC    L E   F  ++ + G++PD   +     
Sbjct: 261 VVQMLEKMSARGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIFNIFFS 317

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
                G I KA +    M +  + P    +  +ID   + G + +A    + M++ GV+ 
Sbjct: 318 AYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTP 377

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           N+  FN+L+           A  L  EML  GI P+   +N LI   CN+G +    +L 
Sbjct: 378 NIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLI 437

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           D M   G+ PD  +YT LI G+C  G   EAE+VF  + ++GL+   + +  L   Y   
Sbjct: 438 DLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSA 497

Query: 555 KESDKARDIHQKWL 568
              D A  + ++ L
Sbjct: 498 SRIDDAYCLFREML 511


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 211/455 (46%), Gaps = 39/455 (8%)

Query: 109 PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           P+R  L T +  + A++  L   G +  A+ +   M      PD   +  +V+ LC+ G 
Sbjct: 134 PLRGCLRTAFT-YTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGR 192

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
            E+A+ ++ E       PN   YNA I GYC   E++ AL +F  M  N   PN  T+  
Sbjct: 193 TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTE 252

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L+H LC                                      K+G   +A+ L++ M 
Sbjct: 253 LIHGLC--------------------------------------KSGKVERAMVLFSRMV 274

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           +  ++ ++V Y  LI G C  G +  AF     M   G +P+  T++ L++ LCK+ K++
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA  F G L K GV  +++ Y ++I GLC  G I  A E +  M+ +  VP+ H ++ +I
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLI 394

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           DG  R   LS A  + + M+  G+ ++  T+  +I    R         +  +M+  GI 
Sbjct: 395 DGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGIN 454

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PD+ TY + + + C  G +  A  +  +M+ RG+ P+++TY  LI+G+   G + +A   
Sbjct: 455 PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFST 514

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           F  +   G   +   + +L +   +   SD + DI
Sbjct: 515 FEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/513 (24%), Positives = 221/513 (43%), Gaps = 85/513 (16%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++  LC  G+   A  L  + +  G  P+++ +N L++  C  G++E A  V 
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M   R SPN  TY   I G C+  ++++A+ LFS M   G+ PN VT+  L+   C +
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A + L   L + +G   +D  T ++L+D+  K     +A      + +K ++ + 
Sbjct: 296 GHLQCAFRLLH--LMETNGLVPND-WTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNE 352

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS----- 351
           V Y  LI+G C  G I +A     +M+  GF+PD  +Y++L++ LC+Q KL +A+     
Sbjct: 353 VVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLED 412

Query: 352 ------------------------------HFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
                                           +  +  TG+ PD ++Y   ++  C  G 
Sbjct: 413 MMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGR 472

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           +  A   ++ M+++ V P    +N +I GY   G +S AFS  ++M+  G   N  ++  
Sbjct: 473 MEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTV 532

Query: 442 LILAETRGGSIFDAFSLKK-------EMLLDGI----FP---DVFT-------------- 473
           L+    +  S  ++  + K       ++LL+ I     P   D+++              
Sbjct: 533 LLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEE 592

Query: 474 -------------------YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
                              Y  +I   C L  +  AL L D M + G  P + +Y  +I 
Sbjct: 593 AKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIIS 652

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             C  GN + A+EVF  +       D I ++IL
Sbjct: 653 SLCEGGNFRTAKEVFGDLLLKESNYDEIVWKIL 685



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/393 (23%), Positives = 168/393 (42%), Gaps = 3/393 (0%)

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           +  ++   P+ N  TY   I  YC   ++  A    +++ + G+ P+   +   V   C+
Sbjct: 60  MESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCR 119

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G+L  A +    VL    G       T T L+      G   +A+A++  M   +   D
Sbjct: 120 AGMLTHACRVF--VLMPLRG-CLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
              Y  +++G C  G    A     + +  GF P+++ YN L++  C  G+++ A   + 
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +     +P+  +Y  +I GLC  G + +A      M+E  + P    +  +I G    G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            L  AF +  LM + G+  N +TF+ LI A  +   + +A      ++  G+  +   Y 
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            LI   C  G I  A +L  +M+  G  PD  +Y+ LI G C +  + +A  +   +   
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+    + + I+     R   S+  + I  K +
Sbjct: 417 GIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 154/373 (41%), Gaps = 51/373 (13%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA-------- 172
           + ++I  LC  GKI  A  L +KMI +G VPD  +++ L++ LC+   L +A        
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 173 ---------------DHVIREMSEMRP------------SPNCATYNAFITGYCRVNELD 205
                          D ++RE+    P            +P+  TY  F+  YC    ++
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
            A  +   M + G+ PN VT+N L+      GL+  A     EV+     K   D  + T
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTF-EVMVGKGWKPNED--SYT 531

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQT---DIVA---------YNVLINGFCLNGDIS 313
           +L+    K      ++ +W     K++Q    DI           Y+  I   C    + 
Sbjct: 532 VLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLE 591

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A  +F  M      P    Y ++++C C+   L +A      ++K+G  P   SY+ II
Sbjct: 592 EAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIII 651

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
             LC  G+   A+E    +L K    +  +W ++I G  + G ++   S+  +M   G  
Sbjct: 652 SSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQ 711

Query: 434 SNVFTFNALILAE 446
            +  T NA+I  E
Sbjct: 712 PS-NTINAMITGE 723



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/264 (17%), Positives = 101/264 (38%), Gaps = 50/264 (18%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN------------ 161
           +  D   +   +R  C  G++  A  +  +M+ +G  P+++T+N L+             
Sbjct: 453 INPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAF 512

Query: 162 -----------------------------------ELCKIGDLEKADHVIREMSEMRPSP 186
                                              ++ KI D++    ++ +++E +   
Sbjct: 513 STFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPL 572

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
               Y+ FI   CRV+ L++A H F  M N  + P+   +  ++   C+  +L DA+  L
Sbjct: 573 AADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLL 632

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
             +           + +  I++ S  + G+   A  ++ D+  K    D + + +LI G 
Sbjct: 633 DSM---TKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGL 689

Query: 307 CLNGDISSAFAYFCQMLKRGFLPD 330
              G ++   +    M + G+ P 
Sbjct: 690 LQKGSVAEFSSLLSVMKEHGYQPS 713


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 192/409 (46%), Gaps = 4/409 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++  AL +   M+ +G  PDV+T+N L+   CK     +A  +I  M    
Sbjct: 13  LIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEG 72

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN  TYN  + G C   ++D AL L   + ++G +P+ V +N ++  LC     GDA 
Sbjct: 73  CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDAD 132

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + + E+L ++      +  T  +++ S  + G   QA+ L   M +     +IV YN +I
Sbjct: 133 ELVTEMLREN---CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 189

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C   ++  A     +M   G  PD++TYNTLL  LC   +  +A      +++ G  
Sbjct: 190 NGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCL 249

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +++ T+I  LC  G +V A E    M +K   P    ++ II G  +   L  A  +
Sbjct: 250 PDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALEL 309

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   G + +   +  L        +I +A    +++   GI P    YN ++   C 
Sbjct: 310 FNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCR 368

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            G    A+ +   M+  G  PD +TY  LI+G    G + EA E+  K+
Sbjct: 369 NGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 417



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 155/324 (47%), Gaps = 3/324 (0%)

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           ++PN  T+N L+H LC++G + DA+  L ++L         DV+T  IL+++  K     
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCR---GCAPDVVTYNILLEATCKGRGYR 59

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           QA+ L + M  +    + V YNVL++G C  GD+  A      +   G  P  + YNT+L
Sbjct: 60  QAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVL 119

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             LC   +  +A      + +    P++ ++  +I  LC  G + +A + L  M +    
Sbjct: 120 KGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCT 179

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
                +N II+G     ++  A  +   M S+G   ++ T+N L+          DA  L
Sbjct: 180 ANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEEL 239

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
              M  +G  PD  T+N LIG  C  G +  A++++ +M  +G TP+ ITY+ +I G   
Sbjct: 240 MDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAK 299

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHI 542
              + +A E+F ++   G   D I
Sbjct: 300 ATKLDQALELFNEMGHKGFNPDKI 323



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 169/382 (44%), Gaps = 4/382 (1%)

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
           M   PN  TYN  I   C   ++  AL +   M   G  P+ VT+NIL+ A CK      
Sbjct: 1   MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 60

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A++ +  + A+     T + +T  +LMD     GD   AL L  ++     +   V YN 
Sbjct: 61  AMELIDLMRAE---GCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNT 117

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           ++ G C       A     +ML+    P+  T+N ++  LC++G L +A      +SK G
Sbjct: 118 VLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG 177

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
              + ++Y  II GLC   ++  A   L  M      P+   +N ++ G        +A 
Sbjct: 178 CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAE 237

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + D M   G   +  TFN LI    + G + DA  + K+M   G  P+  TY+ +I   
Sbjct: 238 ELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 297

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
                +  AL+L++EM  +G  PD I Y  L +       ++EA +   K+Q  G++   
Sbjct: 298 AKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHT 356

Query: 542 IPFRILKKRYRRMKESDKARDI 563
           + +  +     R  +++ A DI
Sbjct: 357 VLYNAILLGLCRNGKTEFAIDI 378



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 136/277 (49%), Gaps = 8/277 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC  G +  A+ L  KM + G   +++T+N ++N LC+  +++ A  ++ +M    
Sbjct: 153 VIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 212

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYN  + G C       A  L   M  NG  P+ VT N L+  LC+KGL+ DA+
Sbjct: 213 CKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAI 272

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   ++    D   T + IT + ++    K     QAL L+N+M  K    D + Y +L 
Sbjct: 273 EVFKQM---PDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLA 328

Query: 304 NGFCLNGD--ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
              CLN D  I  A     ++   G  P  + YN +L  LC+ GK + A      +  +G
Sbjct: 329 E--CLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSG 386

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             PD ++Y  +I+GL   G + +ARE L+ +  + V+
Sbjct: 387 CMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVL 423



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 88/205 (42%)

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V P+  +Y  +I  LC  G +  A   L  ML +   P+   +N++++   +      A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + DLM + G + N  T+N L+      G + DA  L + +   G  P    YN ++   
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C+      A +L  EMLR    P+  T+  +I   C +G +++A ++  K+   G   + 
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 542 IPFRILKKRYRRMKESDKARDIHQK 566
           + +  +       +  D A  +  K
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSK 207


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 192/409 (46%), Gaps = 4/409 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++  AL +   M+ +G  PDV+T+N L+   CK     +A  +I  M    
Sbjct: 173 LIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEG 232

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN  TYN  + G C   ++D AL L   + ++G +P+ V +N ++  LC     GDA 
Sbjct: 233 CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDAD 292

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + + E+L ++      +  T  +++ S  + G   QA+ L   M +     +IV YN +I
Sbjct: 293 ELVTEMLREN---CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 349

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C   ++  A     +M   G  PD++TYNTLL  LC   +  +A      +++ G  
Sbjct: 350 NGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCL 409

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD +++ T+I  LC  G +V A E    M +K   P    ++ II G  +   L  A  +
Sbjct: 410 PDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALEL 469

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M   G + +   +  L        +I +A    +++   GI P    YN ++   C 
Sbjct: 470 FNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCR 528

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            G    A+ +   M+  G  PD +TY  LI+G    G + EA E+  K+
Sbjct: 529 NGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 577



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 182/392 (46%), Gaps = 9/392 (2%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD    N LV +LC+ G  + A+ V+       P+     Y A   GYCR   L  A  +
Sbjct: 101 PDAALANRLVRDLCRRGRPDDAERVVGACG---PAATVVAYGALTDGYCRAGRLGDARRV 157

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M    ++PN  T+N L+H LC++G + DA+  L ++L         DV+T  IL+++
Sbjct: 158 VGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCR---GCAPDVVTYNILLEA 211

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K     QA+ L + M  +    + V YNVL++G C  GD+  A      +   G  P 
Sbjct: 212 TCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPS 271

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            + YNT+L  LC   +  +A      + +    P++ ++  +I  LC  G + +A + L 
Sbjct: 272 TVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLE 331

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M +         +N II+G     ++  A  +   M S+G   ++ T+N L+       
Sbjct: 332 KMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAA 391

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
              DA  L   M  +G  PD  T+N LIG  C  G +  A++++ +M  +G TP+ ITY+
Sbjct: 392 QWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYS 451

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            +I G      + +A E+F ++   G   D I
Sbjct: 452 TIISGLAKATKLDQALELFNEMGHKGFNPDKI 483



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 210/451 (46%), Gaps = 11/451 (2%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+    C  G++G A   RR +      P+  T+N L++ LC+ G +  A  V+ +M   
Sbjct: 140 ALTDGYCRAGRLGDA---RRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCR 196

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  TYN  +   C+     +A+ L   M   G  PN VT+N+L+  +C +G + DA
Sbjct: 197 GCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA 256

Query: 243 VKFLGEVLADDDGKATSDVITSTIL--MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           ++ L  + +   G   S V  +T+L  + S  + GD   A  L  +M ++N   +   +N
Sbjct: 257 LELLRNLPSH--GCKPSTVNYNTVLKGLCSAERWGD---ADELVTEMLRENCPPNEATFN 311

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           V+I   C  G +  A     +M K G   +++TYN ++N LC+Q  +D A      +   
Sbjct: 312 VVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSY 371

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  PD ++Y T+++GLC     V A E + +M +   +P+   +N +I    + G + +A
Sbjct: 372 GCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDA 431

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +   M   G + N  T++ +I    +   +  A  L  EM   G  PD   Y LL   
Sbjct: 432 IEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAEC 490

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             +   I  A+Q   ++   GI+P  + Y  ++ G C  G  + A ++ A + + G   D
Sbjct: 491 LNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPD 550

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            + + IL +        ++AR++  K   R+
Sbjct: 551 DLTYVILIEGLAYEGYLNEARELLIKLCSRD 581



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 153/345 (44%), Gaps = 12/345 (3%)

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +LD AL L  +       P+    N LV  LC++G   DA + +G       G A + V+
Sbjct: 86  DLDAALRLVESSPRP---PDAALANRLVRDLCRRGRPDDAERVVGAC-----GPAAT-VV 136

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
               L D Y + G    A  +   M    +Q +   YN LI+  C  G +  A +    M
Sbjct: 137 AYGALTDGYCRAGRLGDARRVVGGM---PVQPNAYTYNPLIHTLCERGQVRDALSVLDDM 193

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L RG  PDV+TYN LL   CK     +A     ++   G  P+ ++Y  ++ G+C  GD+
Sbjct: 194 LCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDV 253

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A E L ++      P    +N ++ G        +A  +   ML      N  TFN +
Sbjct: 254 DDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVV 313

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I +  R G +  A  L ++M   G   ++ TYN +I   C   ++  A+ L  +M   G 
Sbjct: 314 IYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGC 373

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            PDI+TY  L+KG C+     +AEE+   +   G   D++ F  L
Sbjct: 374 KPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTL 418



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 137/277 (49%), Gaps = 8/277 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC  G +  A+ L  KM + G   +++T+N ++N LC+  +++ A  ++ +M    
Sbjct: 313 VIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 372

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYN  + G C   +   A  L   M  NG  P+ VT N L+  LC+KGL+ DA+
Sbjct: 373 CKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAI 432

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   ++    D   T + IT + ++    K     QAL L+N+M  K    D + Y +L 
Sbjct: 433 EVFKQM---PDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLA 488

Query: 304 NGFCLNGD--ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
              CLN D  I  A     ++   G  P  + YN +L  LC+ GK + A      +  +G
Sbjct: 489 E--CLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSG 546

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             PD ++Y  +I+GL   G + +ARE L+ +  + V+
Sbjct: 547 CMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVL 583


>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
 gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
          Length = 573

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 202/398 (50%), Gaps = 13/398 (3%)

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R  P+  + NA +    R + +D A   F       + P++ T NI++  LCK G L  A
Sbjct: 148 RYRPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKA 207

Query: 243 VKFLGEVLADDDGKA-TSDVITSTILMDSYFK---NGDKFQALALWNDMFQKNIQTDIVA 298
               G+V  D  G      V+T   L+D Y+K    G  +    L  +M Q  I  ++V 
Sbjct: 208 ----GDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVT 263

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           +NVLING+C   +I++A   F +M + G   +++TY +L++ LC++GK++++      + 
Sbjct: 264 FNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEME 323

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           + G+A    +  +++ G C  G +V+A  ++  M +K + P    +N +IDGY R G + 
Sbjct: 324 ELGLA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMK 382

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A + +  M   G+S +V T+N LI   T          L  EM   G+  D+ TYN+LI
Sbjct: 383 EATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLI 442

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
           GA C  G +  A++L DEM+  G+ P   TY  +I G C +G+ K A ++  +++     
Sbjct: 443 GALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKR 502

Query: 539 IDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRNK 572
            + +   +  K + +M + D+A     ++ +K L+ N+
Sbjct: 503 ANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNR 540



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/390 (30%), Positives = 192/390 (49%), Gaps = 23/390 (5%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV---IREMS 180
           VI  LC  G++  A  + + M   G +P V+T+N L++   K G   K  HV   ++EM+
Sbjct: 194 VISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMN 253

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   SPN  T+N  I GYC+ + +  A+ +F  M  +GI  N VT+  LV  LC++G + 
Sbjct: 254 QAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVE 313

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           D++K + E+  ++ G AT   + S  +++ + K G   +A    + M QK ++ ++V YN
Sbjct: 314 DSMKLVEEM--EELGLATLPTLNS--VLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYN 369

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G+   G +  A A    M  +G  PDV TYN L+            S     + +T
Sbjct: 370 TLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKET 429

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GV  D ++Y  +I  LC  G++ KA + L  M+E  + P+   +N II+G+   GD   A
Sbjct: 430 GVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGA 489

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             IR  M      +NV T N  +    + G + +A  +  EML  G+ P+  TY ++   
Sbjct: 490 HDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEII--- 546

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYT 510
             N G           M+ +G  PDI  Y 
Sbjct: 547 --NSG-----------MIEKGYVPDIRGYA 563



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 117/266 (43%), Gaps = 38/266 (14%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +V+   C  G +  A      M QKG  P+V+T+N L++   ++G +++A      M+  
Sbjct: 335 SVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGK 394

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             SP+  TYN  ITG+    +      L   M   G++ + VT+N+L+ ALC KG +  A
Sbjct: 395 GISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKA 454

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           VK L                                      ++M +  ++     YN +
Sbjct: 455 VKLL--------------------------------------DEMVEVGLEPKHRTYNAI 476

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           INGFC  GD   A     +M K     +V+T N  L   CK GK+DEA+     + + G+
Sbjct: 477 INGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGL 536

Query: 363 APDQISYKTIIQGLCIHGDIVKAREF 388
            P++I+Y+ I  G+   G +   R +
Sbjct: 537 VPNRITYEIINSGMIEKGYVPDIRGY 562



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 78/149 (52%), Gaps = 5/149 (3%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  M++TG     ++ D   +  +I  LC  G++  A+ L  +M++ G  P   T+N ++
Sbjct: 423 LDEMKETG-----VKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAII 477

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           N  C+ GD + A  +   M + +   N  T N F+  +C++ ++D+A  + + M   G+ 
Sbjct: 478 NGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLV 537

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           PNR+T+ I+   + +KG + D   +  +V
Sbjct: 538 PNRITYEIINSGMIEKGYVPDIRGYAADV 566


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 199/415 (47%), Gaps = 7/415 (1%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           L  + +V+  CK G ++ A  ++ EM       N   YN+ +  Y R  +  +   L   
Sbjct: 133 LAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEI 192

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M N GI     T+ ILV +L   G +      + E+ A +      DV   T ++++Y +
Sbjct: 193 MENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKN---VAGDVYLYTAVINAYCR 249

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G+  +A  ++++     I+ +   Y VLINGFC  G + +A      M  RG   + I 
Sbjct: 250 AGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQII 309

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           +NT+++  C+QG +D A      + K G+  D  +Y T+  GLC    + +A+  L  M+
Sbjct: 310 FNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMI 369

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           EK V P    +  +I  + + GD+  A  +   M   G   +V T+N ++    + GSI 
Sbjct: 370 EKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIR 429

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A   +KEM   G+ PDV+TY  L+   C  G + +AL+L++EM  RG  P+++ YT LI
Sbjct: 430 EAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALI 489

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            G    G  +EA +++  +   GL  D   +  L         +D  +DIH K +
Sbjct: 490 SGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL----HTDNRKDIHHKQI 540



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 189/385 (49%), Gaps = 7/385 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA-V 243
           SP  A+    + G+C+   +D A  L   M  +G+R N + +N L+    ++    DA V
Sbjct: 131 SPLAAS--VVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRK--DDARV 186

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L E++  ++G   + V T TIL+DS    GD  +  A+ ++M  KN+  D+  Y  +I
Sbjct: 187 QELLEIM--ENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVI 244

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           N +C  G++  A   F + +  G  P+  TY  L+N  CK G+++ A      +   GV 
Sbjct: 245 NAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVG 304

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            +QI + T+I G C  G +  A +   +M +  +  + + +N +  G  R   ++ A ++
Sbjct: 305 HNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTL 364

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
             +M+  GV  N  T+  LI    + G + +A  L +EM   G  P V TYN+++     
Sbjct: 365 LHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIK 424

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G I  A +   EM ++G+ PD+ TY  L+ GHC  G +  A ++F +++  G   + + 
Sbjct: 425 KGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVA 484

Query: 544 FRILKKRYRRMKESDKARDIHQKWL 568
           +  L     +   S++A  ++   L
Sbjct: 485 YTALISGLAKEGRSEEAFQLYDDML 509



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 160/346 (46%), Gaps = 7/346 (2%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           +  L  + + G +  T+ T    +  ++  L   G I     +  +M  K    DV  + 
Sbjct: 186 VQELLEIMENGGIEATVGT----YTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYT 241

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            ++N  C+ G++ +A  V  E       PN  TY   I G+C++ +++ A  L + M   
Sbjct: 242 AVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGR 301

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G+  N++  N ++   C++G++ +A+K      A +      DV T   L     +    
Sbjct: 302 GVGHNQIIFNTMIDGYCRQGMVDNALKVKA---AMEKMGIELDVYTYNTLACGLCRVNRM 358

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +A  L + M +K +  + V Y  LI+  C  GD+  A   F +M  +G +P V+TYN +
Sbjct: 359 AEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVM 418

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           ++   K+G + EA  F   + K G+ PD  +Y +++ G C++G +  A +    M  +  
Sbjct: 419 MDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGT 478

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            P    +  +I G  + G    AF + D ML  G++ +   ++AL+
Sbjct: 479 EPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 3/218 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G +  AL ++  M + G   DV T+N L   LC++  + +A  ++  M E  
Sbjct: 313 MIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKG 372

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY   I+ +C+  ++ +A  LF  MA  G  P+ VT+N+++    KKG + +A 
Sbjct: 373 VPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAE 432

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +F  E+   +      DV T   L+  +  NG    AL L+ +M  +  + ++VAY  LI
Sbjct: 433 RFRKEM---EKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALI 489

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
           +G    G    AF  +  MLK G  PD   Y+ L+  L
Sbjct: 490 SGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 217/451 (48%), Gaps = 36/451 (7%)

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           ++T+N L+N LCK G +  A    R+  +    P   TY+  I G CR NE+DK   L  
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            MA  G  PN VT+N LV+AL  +G   +A   L  + A+       ++IT  +++    
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANG---CPPELITFGLIIKGLC 117

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G+   A  + ++M  +    D+  + VL++  C  G +  A+ +F Q+L  GF PD +
Sbjct: 118 KEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAV 177

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TYNT+++ L K G+L+ A     +L+++  +P   ++   + GL   G++  A EF  SM
Sbjct: 178 TYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSM 237

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFS-IRD-------------------------- 425
            +  V P    ++ +IDG  + G L  A   +RD                          
Sbjct: 238 PQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEA 297

Query: 426 --LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
             L+ +     NV  FN+L+    +   + +AF L   M   G   DV TYN+L+   C 
Sbjct: 298 IQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCK 357

Query: 484 LGHIHLALQLYDEMLRR--GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL-GLAID 540
           L  I  A + + E++RR  G +P+++T++ LI+G C  G + +A EV+ ++  + G++ +
Sbjct: 358 LRRIPEAYR-HVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPN 416

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
              +  L +   +  +S +     ++ L R 
Sbjct: 417 RFTYAFLLEGLCKAGDSRRLEQCFEQMLERE 447



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 224/489 (45%), Gaps = 48/489 (9%)

Query: 79  NEGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
            EG  +A F  +D            M D G V      D   H  ++  LC  G++  A 
Sbjct: 118 KEGEIEAAFRVVD-----------EMVDRGFV-----PDVEIHTVLLHALCELGRVDEAW 161

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
           +  ++++  G  PD +T+N +V+ L K G LE A  V++ ++E   SP   T+   + G 
Sbjct: 162 FFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGL 221

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            +   L  A   F +M   G+ PN VT++ L+  LCK G L  A+  L       D  + 
Sbjct: 222 SKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLL------RDKNSQ 275

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           + +   + L+    +     +A+ L   M       ++V +N L+NG C    +  AF  
Sbjct: 276 AGMFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFEL 332

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT-GVAPDQISYKTIIQGLC 377
           F  M + G   DVITYN LL  LCK  ++ EA     ++ +T G +P+ +++ T+IQGLC
Sbjct: 333 FDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLC 392

Query: 378 IHGDIVKAREFLLSMLE-KSVVPEPHIWNVIIDGYGRCGD-----------------LSN 419
             G + +A E    M+  + + P    +  +++G  + GD                  S+
Sbjct: 393 NAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSS 452

Query: 420 AFSIR----DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
           ++ I     D ++       + T+N L+   ++ G + DA  L + M+  G+ PDV T+N
Sbjct: 453 SWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFN 512

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            ++   C    I  A  ++   L RG  P+++TY+ LI G      M EA ++ AK+  L
Sbjct: 513 SVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL 572

Query: 536 GLAIDHIPF 544
           G   + + +
Sbjct: 573 GCRANTVTY 581



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 214/506 (42%), Gaps = 72/506 (14%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  L   G +  AL L   MI+ G  PDV+T N +++ LCK   +  A +V +   E  
Sbjct: 479 LVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 538

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TY+  I G  ++ ++D+AL L + M   G R N VT++ +V  L K G + DAV
Sbjct: 539 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 598

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL- 302
             L ++    D     D +T   L+D +FK     +A+ L  +M +      +V Y  L 
Sbjct: 599 VVLRQM---RDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLC 655

Query: 303 ----------------------------------INGFCLNGDISSAFAYFCQMLKRGFL 328
                                             ++G C  G ++ A  YF +M +   +
Sbjct: 656 HGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVV 715

Query: 329 -PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P VI Y+ L++ LCK G++DEA  F   + + G  PD +++  +I GLC  G I    E
Sbjct: 716 APHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLE 775

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT--------- 438
               M E+    + + +N +I+ Y   G+ S A+++ + M + G++ N  T         
Sbjct: 776 LFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALC 835

Query: 439 ------------------------FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
                                   +N LI +         A  L + M+ DG  PD   Y
Sbjct: 836 GNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNY 895

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
             ++      G   +A +L  EM  RG +PD+ TYT +I G      +  A + F ++  
Sbjct: 896 MTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLR 955

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKA 560
             L  D I +  L   + +  + D A
Sbjct: 956 KNLKPDAIVYSSLIDAFCKADKVDDA 981



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 206/444 (46%), Gaps = 30/444 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I  LC  GK+  AL L R    K +   +   + L++ LC+   LE+A  +++ M  +
Sbjct: 251 ALIDGLCKAGKLDIALGLLR---DKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCV 307

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   +N+ + G C+   +D+A  LF  M  +G   + +T+NIL+  LCK   + +A
Sbjct: 308 ---PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEA 364

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNV 301
            + + E++   +G  + +V+T + L+      G   QA  ++  M   + I  +   Y  
Sbjct: 365 YRHV-ELMRRTEG-CSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAF 422

Query: 302 LINGFCLNGDISSAFAYFCQMLKR---------------GFL------PDVITYNTLLNC 340
           L+ G C  GD       F QML+R                FL      P ++TYNTL+  
Sbjct: 423 LLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTG 482

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           L K G + +A      + ++G++PD I++ +++ GLC    I+ A       LE+   P 
Sbjct: 483 LSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPN 542

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              ++ +IDG  +   +  A  +   M+  G  +N  T++ ++    + G + DA  + +
Sbjct: 543 VVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLR 602

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           +M   G  PD  TYN LI        +  A+ L  EML  G  P ++TYT L  G C  G
Sbjct: 603 QMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSG 662

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPF 544
              EA E+   +   G A + I +
Sbjct: 663 RFDEAVEILDYMAARGCAPNAITY 686



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 216/447 (48%), Gaps = 48/447 (10%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G++  A    RK IQ G  P V+T++ +++ LC+  +++K   ++ EM+   
Sbjct: 7   LINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRG 66

Query: 184 PSPNCATYNAF-----------------------------------ITGYCRVNELDKAL 208
            +PN  TYN                                     I G C+  E++ A 
Sbjct: 67  CAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAF 126

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
            +   M + G  P+   H +L+HALC+ G + +A  F  +VL       T D +T   ++
Sbjct: 127 RVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIG---FTPDAVTYNTMV 183

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIV-AYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           D  +K G + +A  +   +  ++  +  V  + + ++G    G+++ A+ +F  M + G 
Sbjct: 184 DGLYKAG-RLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+ +TY+ L++ LCK GKLD A    G+L          ++ +++ GLC    + +A +
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIA---LGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQ 299

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L +M     VP    +N +++G  +   +  AF + D+M   G S++V T+N L+    
Sbjct: 300 LLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLC 356

Query: 448 RGGSIFDAFSLKKEM-LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR-RGITPD 505
           +   I +A+   + M   +G  P+V T++ LI   CN G ++ A ++Y+ M+   GI+P+
Sbjct: 357 KLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPN 416

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKI 532
             TY  L++G C  G+ +  E+ F ++
Sbjct: 417 RFTYAFLLEGLCKAGDSRRLEQCFEQM 443



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 210/435 (48%), Gaps = 14/435 (3%)

Query: 101  LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
            L+ MRD G +      D   +  +I       ++  A+ L R+M++ G  P V+T+  L 
Sbjct: 601  LRQMRDAGCL-----PDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLC 655

Query: 161  NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI- 219
            + LC+ G  ++A  ++  M+    +PN  TY++ + G C+   + +AL  F  MA + + 
Sbjct: 656  HGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVV 715

Query: 220  RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
             P+ + ++ L+  LCK G + +A +FL  ++         DV+T +IL++     G    
Sbjct: 716  APHVIAYSALIDGLCKAGRIDEAYEFLERMI---RAGRIPDVVTFSILINGLCDAGRIDT 772

Query: 280  ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
             L L+  M ++  + DI AYN +IN +CL G+ S+A+A   +M   G   + +T+  ++ 
Sbjct: 773  GLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIK 832

Query: 340  CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             LC   ++DEA  ++  + +     D+ISY T+I  L       +A E L +M+     P
Sbjct: 833  ALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSP 890

Query: 400  EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
            +   +  ++DG  + G    A  +   M S G S ++ T+  +I   ++   +  A    
Sbjct: 891  DACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYF 950

Query: 460  KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            +EML   + PD   Y+ LI A C    +  A +L   +   GI P I  Y+ ++   C  
Sbjct: 951  EEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKN 1007

Query: 520  GNMKEAEEVFAKIQT 534
                +A EV  ++++
Sbjct: 1008 RGTDKALEVIREMKS 1022



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 193/423 (45%), Gaps = 21/423 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  LC   ++  A  L   M + G   DV+T+N L+  LCK+  + +A   +  M   
Sbjct: 315 SLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRT 374

Query: 183 RP-SPNCATYNAFITGYCRVNELDKALHLFSTM-ANNGIRPNRVTHNILVHALCKKGLLG 240
              SPN  T++  I G C    +++A  ++  M A  GI PNR T+  L+  LCK G   
Sbjct: 375 EGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAG--- 431

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI-QTDIVAY 299
                        D +          +++  +++   +   +   D     + +  +V Y
Sbjct: 432 -------------DSRRLEQCFEQ--MLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTY 476

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N L+ G   +G +  A      M++ G  PDVIT+N++L+ LCK+ ++ +A + +    +
Sbjct: 477 NTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 536

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G  P+ ++Y T+I GL     + +A + L  M+E         ++ ++DG  + G + +
Sbjct: 537 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 596

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +   M   G   +  T+N LI    +   + +A  L +EML  G  P V TY  L  
Sbjct: 597 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 656

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C  G    A+++ D M  RG  P+ ITY+ ++ G C  G + EA   F K+    +  
Sbjct: 657 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 716

Query: 540 DHI 542
            H+
Sbjct: 717 PHV 719



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 148/333 (44%), Gaps = 33/333 (9%)

Query: 121  HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
            + A+I  LC  G+I  A     +MI+ G +PDV+T + L+N LC  G ++    +   M+
Sbjct: 722  YSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMA 781

Query: 181  EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            E     +   YNA I  YC   E   A  L   M  +GI  N VTH I++ ALC    + 
Sbjct: 782  ERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRID 841

Query: 241  DAVKFLGEVLAD-DDGKATSDVITSTI-----------------------------LMDS 270
            +AV +   +  D  D  + + +ITS +                             +MD 
Sbjct: 842  EAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDG 901

Query: 271  YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             FK G    A  L  +M  +    D+  Y ++I+G      +  A  YF +ML++   PD
Sbjct: 902  LFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPD 961

Query: 331  VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
             I Y++L++  CK  K+D+A   + +L  +G+ P    Y T++  LC +    KA E + 
Sbjct: 962  AIVYSSLIDAFCKADKVDDA---WKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIR 1018

Query: 391  SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
             M  K+  P  HIW  +   Y   G +  A  +
Sbjct: 1019 EMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKL 1051


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 213/476 (44%), Gaps = 66/476 (13%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+   C  G++  A  L  +M  +G  P+V+T N  ++ LCK G +  A  +  +M E  
Sbjct: 218 VVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKW 277

Query: 184 ----PSPNCATYNAFITGYCRVNELDKA-------------------------------- 207
               P P+  T++  ++G+C    +D+A                                
Sbjct: 278 ERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMV 337

Query: 208 ---LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
                L   MA+ G++PN  T+NI+V  LCK+G   D  K    V     G  T DV+T 
Sbjct: 338 GEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFV---KSGVMTPDVVTY 394

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T L+ +Y   G+   A  + ++M QK    +   YNVL+      G I+ A     +M +
Sbjct: 395 TSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSE 454

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFY-GVLSKTGVA-------------------- 363
           +G+  D  + N +++ LC+  KLD A     G+ ++  +A                    
Sbjct: 455 KGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKR 514

Query: 364 --PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             PD+I+Y T++  LC  G   +A++ LL M+ K + P+  +++  I GY + G  S A 
Sbjct: 515 CLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAV 574

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   M   G   +  T+N LI       +  +   L  EM   GI P+V TYN LI + 
Sbjct: 575 KVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSF 634

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF-AKIQTLG 536
           C  G ++ A+ L DEML+  I P+I ++  LIK  C   +   A+ VF A + T G
Sbjct: 635 CERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCG 690



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 112/471 (23%), Positives = 189/471 (40%), Gaps = 51/471 (10%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR---------------- 183
           L + ++  G  PDV T N L+  LC  G +E A  V   M E                  
Sbjct: 137 LYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMPERNEFSFGILARGYCRAGR 196

Query: 184 -----------PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
                      P+ N    N  + G+CR  ++D+A  L   M + G+ PN VT N  + A
Sbjct: 197 SMDALGVLDSMPTMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISA 256

Query: 233 LCKKGLLGDAVKFLGEVLAD-DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
           LCK G + DA +   ++    + G    D +T  +++  + + G   +A  L + M    
Sbjct: 257 LCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGG 316

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
               + +YN  ++G   NG +  A     +M   G  P+  TYN +++ LCK+GK  +  
Sbjct: 317 FLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVR 376

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                +    + PD ++Y +++   C  G+   A   L  M +K   P    +NV++   
Sbjct: 377 KVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSL 436

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG----- 466
            + G ++ A  + + M   G S +  + N +I    R   +  A  +   M  +G     
Sbjct: 437 WKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALG 496

Query: 467 ------------------IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
                               PD  TY+ L+ A C  G    A +   EM+ + I+PD + 
Sbjct: 497 RLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVL 556

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
           Y   I G+C  G    A +V   ++  G       + +L   +R    SD+
Sbjct: 557 YDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDE 607



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 167/378 (44%), Gaps = 15/378 (3%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            YN  +    +    D    L+  +  +G  P+  T NIL+ ALC  G +  A +     
Sbjct: 117 VYNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVF--- 173

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
               D     +  +  IL   Y + G    AL + + M   N+    V  N ++ GFC  
Sbjct: 174 ----DAMPERNEFSFGILARGYCRAGRSMDALGVLDSMPTMNL----VVCNTVVAGFCRE 225

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT---GVA-PD 365
           G +  A     +M   G  P+V+T+N  ++ LCK G++ +A   +  + +    G+  PD
Sbjct: 226 GQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPD 285

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
           Q+++  ++ G C  G + +AR  +  M     +     +N  + G  R G +  A  +  
Sbjct: 286 QVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLR 345

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   GV  N +T+N ++    + G  FD   ++  +    + PDV TY  L+ A C+ G
Sbjct: 346 EMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEG 405

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           +   A ++ DEM ++G  P+  TY  L++     G + EAE +  ++   G ++D     
Sbjct: 406 NAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCN 465

Query: 546 ILKKRYRRMKESDKARDI 563
           I+     R  + D A DI
Sbjct: 466 IIIDGLCRNNKLDMAMDI 483



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 180/414 (43%), Gaps = 30/414 (7%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
            +  D   + +++   C  G    A  +  +M QKG  P+  T+N L+  L K G + +A
Sbjct: 386 VMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEA 445

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG-------------- 218
           + ++  MSE   S + A+ N  I G CR N+LD A+ +   M N G              
Sbjct: 446 ERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSL 505

Query: 219 ---------IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
                      P+R+T++ LV ALCK+G   +A K L E++  D    + D +     + 
Sbjct: 506 LTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKD---ISPDSVLYDTFIH 562

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
            Y K+G    A+ +  DM +K  +     YN+LI GF    +         +M  +G  P
Sbjct: 563 GYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICP 622

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           +V+TYN+L+   C++G +++A      + +  + P+  S++ +I+  C   D   A+   
Sbjct: 623 NVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVF 682

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
            + L      E  +++++       G    A +I + +L   +S + F +  +I    + 
Sbjct: 683 DASLSTCGQKEV-LYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKV 741

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG---HIHLALQLYDEMLRR 500
             +     L K +++ G   D   +  +I A    G   H+ +  Q   EM  R
Sbjct: 742 DEVDHGHRLLKLLMVKGYSFDPAAFMPVIDALSERGKKQHVDMLSQKMMEMAER 795


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 211/455 (46%), Gaps = 39/455 (8%)

Query: 109 PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           P+R  L T +  + A++  L   G +  A+ +   M      PD   +  +V+ LC+ G 
Sbjct: 134 PLRGCLRTAFT-YTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGR 192

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
            E+A+ ++ E       PN   YNA I GYC   E++ AL +F  M  N   PN  T+  
Sbjct: 193 TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTE 252

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L+H LC                                      K+G   +A+ L++ M 
Sbjct: 253 LIHGLC--------------------------------------KSGKVERAMVLFSRMV 274

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           +  ++ ++V Y  LI G C  G +  AF     M   G +P+  T++ L++ LCK+ K++
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA  F G L K GV  +++ Y ++I GLC  G I  A E +  M+ +  VP+ H ++ +I
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLI 394

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           DG  R   LS A  + + M+  G+ ++  T+  +I    R         +  +M+  GI 
Sbjct: 395 DGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGIN 454

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PD+ TY + + + C  G +  A  +  +M+ RG+ P+++TY  LI+G+   G + +A   
Sbjct: 455 PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFST 514

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           F  +   G   +   + +L +   +   SD + DI
Sbjct: 515 FEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/393 (23%), Positives = 168/393 (42%), Gaps = 3/393 (0%)

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           +  ++   P+ N  TY   I  YC   ++  A    +++ + G+ P+   +   V   C+
Sbjct: 60  MESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCR 119

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G+L  A +    VL    G       T T L+      G   +A+A++  M   +   D
Sbjct: 120 AGMLTHACRVF--VLMPLRG-CLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
              Y  +++G C  G    A     + +  GF P+++ YN L++  C  G+++ A   + 
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +     +P+  +Y  +I GLC  G + +A      M+E  + P    +  +I G    G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            L  AF +  LM + G+  N +TF+ LI A  +   + +A      ++  G+  +   Y 
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            LI   C  G I  A +L  +M+  G  PD  +Y+ LI G C +  + +A  +   +   
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+    + + I+     R   S+  + I  K +
Sbjct: 417 GIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 220/454 (48%), Gaps = 8/454 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  V+R LC   +   A+ L R M   G   DV+T+  L+  LC   +L+ A  ++ EM 
Sbjct: 118 YTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMC 177

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN   Y+  + GYCR         +F  M+  G+ P+ +     +  LCKKG +G
Sbjct: 178 GSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIG 237

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            AVK + +++         +V+T  +L++   K G   +ALAL N+M  K +  D+V YN
Sbjct: 238 KAVK-VKDIMVQRG--LEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYN 294

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFL--PDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
            LI G     ++  A     +M++   L  PDV+T+N++++ LCK G++ +A     +++
Sbjct: 295 TLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMA 354

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           + G   + ++Y  +I G      +  A   +  ++   + P+   ++++I+G+ +  ++ 
Sbjct: 355 ERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVD 414

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLL 477
            A      M   G+ + +F +  L+ A  + G +  A  L  EM ++ G+  D   Y+ +
Sbjct: 415 RAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGL--DAVAYSTM 472

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           +  +C  G I  A QL  +ML  G+ PD +TY+ LI      G+++EAE V  ++   G 
Sbjct: 473 MYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGF 532

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             D   F  L K Y    + +K  D+  +   +N
Sbjct: 533 VPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKN 566



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 227/478 (47%), Gaps = 22/478 (4%)

Query: 76  DSDNEGNPQAVFNALDLIL-----------KENLDRLKTMRDTGPVRCTLETDYRRHVAV 124
           D   E +P A  NA+   +            E +  L++M+ +G     +  D   +  +
Sbjct: 102 DMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASG-----VRADVVTYGTL 156

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           IR LC   ++  AL L  +M   G  P+V+ ++ L+   C+ G  +    V  EMS +  
Sbjct: 157 IRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGV 216

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            P+   +  FI   C+   + KA+ +   M   G+ PN VT+N+L++ LCK+G + +A+ 
Sbjct: 217 EPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALA 276

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN--IQTDIVAYNVL 302
              E+   DD     DV+T   L+       +   A+ L  +M Q +  ++ D+V +N +
Sbjct: 277 LRNEM---DDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSV 333

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C  G +  A +    M +RG + +++TYN L+    +  K++ A +    L  +G+
Sbjct: 334 IHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGL 393

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  +Y  +I G     ++ +A  FL +M ++ +  E   +  ++    + G +  A  
Sbjct: 394 EPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMV 453

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M       +   ++ ++    + G I  A  L ++ML +G+ PD  TY++LI    
Sbjct: 454 LFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFA 512

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            LG +  A ++  +M   G  PD+  +  LIKG+ A G + +  ++  +++   +AID
Sbjct: 513 KLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAID 570



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 184/375 (49%), Gaps = 6/375 (1%)

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL-LGDAVKFLG 247
           A   A +    R   + +A  L S + +  +R + V++NI++ ALC++G  L  A+  L 
Sbjct: 45  ADAAALLNRRLRAAPVTEACSLLSALPD--VR-DAVSYNIVLAALCRRGGDLRQALSLLA 101

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           ++  +    A  + ++ T++M     +    +A+AL   M    ++ D+V Y  LI G C
Sbjct: 102 DMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLC 161

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
              ++  A     +M   G  P+VI Y+ LL   C+ G+  + S  +  +S+ GV PD I
Sbjct: 162 DAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVI 221

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            +   I  LC  G I KA +    M+++ + P    +NV+I+   + G +  A ++R+ M
Sbjct: 222 MFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEM 281

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG--IFPDVFTYNLLIGASCNLG 485
              GV+ +V T+N LI   +    +  A  L +EM+     + PDV T+N +I   C +G
Sbjct: 282 DDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIG 341

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  A+ + + M  RG   +++TY  LI G      +  A  + +++ + GL  D   + 
Sbjct: 342 RMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYS 401

Query: 546 ILKKRYRRMKESDKA 560
           IL   + ++ E D+A
Sbjct: 402 ILINGFSKLWEVDRA 416



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 141/267 (52%), Gaps = 6/267 (2%)

Query: 137 ALWLRRKMIQKGTV--PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
           A+ L  +MIQ  T+  PDV+T N +++ LCKIG + +A  V   M+E     N  TYN  
Sbjct: 309 AMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYL 368

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           I G+ RV++++ A++L S + ++G+ P+  T++IL++   K   +  A  FL  +     
Sbjct: 369 IGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTM---TQ 425

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
               +++     L+ +  + G   QA+ L+N+M   N   D VAY+ ++ G C +GDI +
Sbjct: 426 RGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKA 484

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A      ML  G  PD +TY+ L+N   K G L+EA      ++ +G  PD   + ++I+
Sbjct: 485 AKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIK 544

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEP 401
           G    G I K  + +  M  K+V  +P
Sbjct: 545 GYSAEGQINKILDLIHEMRAKNVAIDP 571



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 39/278 (14%)

Query: 295 DIVAYNVLINGFCL-NGDISSAFAYFCQMLKRGF---LPDVITYNTLLNCLCKQGKLDEA 350
           D V+YN+++   C   GD+  A +    M +       P+ ++Y  ++  LC   + DEA
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                 +  +GV  D ++Y T+I+GLC   ++  A E L  M                  
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEM------------------ 176

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
              CG               GV  NV  ++ L+    R G   D   + +EM   G+ PD
Sbjct: 177 ---CGS--------------GVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPD 219

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V  +   I   C  G I  A+++ D M++RG+ P+++TY  LI   C  G+++EA  +  
Sbjct: 220 VIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRN 279

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           ++   G+A D + +  L      + E D A  + ++ +
Sbjct: 280 EMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMI 317


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 184/354 (51%), Gaps = 6/354 (1%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
            C   ++  AL    KM++ G  P ++T   LVN  C +  +++A  ++ ++  +   PN
Sbjct: 118 FCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPN 177

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
              YN  I   C   ++D AL + + M   GIRP+ +T+N L+  L   G  G + + L 
Sbjct: 178 VVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILS 237

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           +++         DVIT + ++D + K G   +A   +++M Q+++  +IV YN LING C
Sbjct: 238 DMMR---MGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLC 294

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
           ++G +  A      M+ +GF P+ +TYNTL+N  CK  ++D+A     V+S  GV  D  
Sbjct: 295 IHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTF 354

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF-SIRDL 426
           +Y T+ QG C  G    A + L  M+   V+P+ + +N+++DG    G +  A   + DL
Sbjct: 355 TYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDL 414

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY-NLLIG 479
             S  V   + T+N +I    +   + DA+ L   + L G+ PDV TY  ++IG
Sbjct: 415 QKSETVVG-IITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIG 467



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 219/451 (48%), Gaps = 6/451 (1%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
           +DYR     +R      K   AL L   M +   +P ++  + L+  + K+   E    +
Sbjct: 39  SDYRER---LRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISL 95

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
            R +  +  S +  +++  I  +CR + L  AL     M   G  P+ VT   LV+  C 
Sbjct: 96  FRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCH 155

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
              + +A+  + +++    G   + VI +TI+ DS  +N     AL + N M +  I+ D
Sbjct: 156 VNRIQEAMSLVDQIVGL--GYEPNVVIYNTII-DSLCENRQVDTALDVLNHMEKMGIRPD 212

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           ++ YN LI     +G    +      M++ G  PDVIT++ +++   K+G+L EA   Y 
Sbjct: 213 VITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYD 272

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + +  V P+ ++Y ++I GLCIHG + +A++ L  M+ K   P    +N +++GY +  
Sbjct: 273 EMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSK 332

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            + +A  I  +M   GV  + FT+N L     + G    A  +   M+  G+ PD++T+N
Sbjct: 333 RVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFN 392

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           +L+   C  G I  AL   +++ +      IITY  +IKG C    +++A  +F  +   
Sbjct: 393 MLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALK 452

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           G++ D I +  +    RR +   +A ++++K
Sbjct: 453 GVSPDVITYTTMMIGLRRKRLWLEAHELYRK 483



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 199/418 (47%), Gaps = 6/418 (1%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
            D+ R +  I  L    K    + L R +   G   D+ + + L++  C+   L  A   
Sbjct: 74  VDFSRLLVAIAKL---KKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSC 130

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           + +M ++   P+  T+ + + G+C VN + +A+ L   +   G  PN V +N ++ +LC+
Sbjct: 131 LGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 190

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
              +  A+  L  +   +      DVIT   L+   F +G    +  + +DM +  I  D
Sbjct: 191 NRQVDTALDVLNHM---EKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPD 247

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           ++ ++ +I+ F   G +  A   + +M++R   P+++TYN+L+N LC  G LDEA     
Sbjct: 248 VITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLN 307

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +   G  P+ ++Y T++ G C    +  A + L  M    V  +   +N +  GY + G
Sbjct: 308 FMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAG 367

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
             + A  +   M+S GV  +++TFN L+      G I  A    +++        + TYN
Sbjct: 368 QFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYN 427

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           ++I   C    +  A  L+  +  +G++PD+ITYT ++ G   +    EA E++ K++
Sbjct: 428 IIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMK 485



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 8/279 (2%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           LD L  M   G     +  D   + ++I  L   GK G +  +   M++ G  PDV+T +
Sbjct: 198 LDVLNHMEKMG-----IRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFS 252

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            +++   K G L +A     EM +    PN  TYN+ I G C    LD+A  + + M + 
Sbjct: 253 AMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSK 312

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G  PN VT+N LV+  CK   + DA+K L   +   DG    D  T   L   Y + G  
Sbjct: 313 GFFPNAVTYNTLVNGYCKSKRVDDAMKIL--CVMSHDG-VDGDTFTYNTLYQGYCQAGQF 369

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             A  +   M    +  DI  +N+L++G C +G I  A      + K   +  +ITYN +
Sbjct: 370 NAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNII 429

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           +  +CK  K+++A + +  L+  GV+PD I+Y T++ GL
Sbjct: 430 IKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGL 468



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 1/113 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V C +  D      ++  LC  GKI  AL     + +  TV  ++T+N ++  +CK   +
Sbjct: 380 VSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKV 439

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM-ANNGIRP 221
           E A ++   ++    SP+  TY   + G  R     +A  L+  M  ++G+ P
Sbjct: 440 EDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 224/459 (48%), Gaps = 8/459 (1%)

Query: 102 KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           + + D  P+R  + + +  + A+I   C  G++  AL ++  M Q G  PD  T+N L+ 
Sbjct: 304 RGLLDEMPLRGVVPSVWTYN-AMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIY 362

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP 221
            LC  G L++A+ ++        +P   T+   I GYC+   +D AL + S M ++  + 
Sbjct: 363 GLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKL 421

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           +   + +L++ L KK  L +A + L E+ A+       +V+T T ++D Y K G    AL
Sbjct: 422 DLQAYGVLINVLIKKCRLKEAKETLNEMFANG---LAPNVVTYTSIIDGYCKVGMVGAAL 478

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            ++  M  +    +   Y  LI G   +  +  A A   +M + G  P VITY TL+   
Sbjct: 479 EVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQ 538

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK+ + D A   + ++ + G+ PD+ +Y  +   LC  G   +A  FL+    K VV   
Sbjct: 539 CKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---RKGVVLTK 595

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +  ++DG+ + G+   A  + + M++ G  ++++T++ L+ A  +   + +A S+  +
Sbjct: 596 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQ 655

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           M + G+  ++  Y ++I      G    A  L++EM+  G  P   TYT  I  +C  G 
Sbjct: 656 MTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGR 715

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           ++EAE +  +++  G+  D + + I       M   D+A
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRA 754



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 195/444 (43%), Gaps = 35/444 (7%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           LKE  + L  M   G     L  +   + ++I   C  G +G AL + + M  +G  P+ 
Sbjct: 439 LKEAKETLNEMFANG-----LAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNA 493

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+  L+  L +   L KA  +I +M E   +P   TY   I G C+ +E D A  LF  
Sbjct: 494 WTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEM 553

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFL---GEVLADDDGKATSDVITSTILMDS 270
           M  NG+ P+   +N+L  ALCK G   +A  FL   G VL           +T T L+D 
Sbjct: 554 MEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTK---------VTYTSLVDG 604

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + K G+   A  L   M  +  + D+  Y+VL+   C    ++ A +   QM   G   +
Sbjct: 605 FSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCN 664

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           ++ Y  +++ + K+GK D A   +  +  +G  P   +Y   I   C  G I +A   + 
Sbjct: 665 IVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIG 724

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M    V P+   +N+ I+G G  G +  AFS    M+      N +T+  L+L      
Sbjct: 725 EMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTY-WLLLKHFLKM 783

Query: 451 SIFDA-----------------FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
           S+ +A                 + L + M+  G+ P V TY+ +I   C    +  A  L
Sbjct: 784 SLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVL 843

Query: 494 YDEMLRRGITPDIITYTELIKGHC 517
            D ML + I+P+   YT LIK  C
Sbjct: 844 LDHMLGKDISPNEEIYTMLIKCCC 867



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 209/454 (46%), Gaps = 6/454 (1%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E +D ++ +R  G  R  L    + +   +R L           L   ++Q+G +PD 
Sbjct: 122 VREAVDAIQAIRRVGGKRLVLSP--KCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDT 179

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N ++   CK G L  A      + E     +  T NA + GYCR ++L KA  L   
Sbjct: 180 VTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMM 239

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G R N  ++ IL+  LC+   + +A+  +  ++ D     + ++ T T+L+    K
Sbjct: 240 MPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDG---CSLNLHTYTLLIKGLCK 296

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G    A  L ++M  + +   +  YN +I+G+C +G +  A      M + G  PD  T
Sbjct: 297 EGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN+L+  LC  GKLDEA          G  P  I++  +I G C    I  A     +M+
Sbjct: 357 YNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
             +   +   + V+I+   +   L  A    + M + G++ NV T+ ++I    + G + 
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVG 475

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A  + K M  +G  P+ +TY  LI        +H A+ L  +M   GITP +ITYT LI
Sbjct: 476 AALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLI 535

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +G C +     A  +F  ++  GL  D   + +L
Sbjct: 536 QGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVL 569



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 210/443 (47%), Gaps = 7/443 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+ LC  G+I  A  L  +M  +G VP V T+N +++  CK G ++ A  +   M 
Sbjct: 287 YTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 346

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   +P+  TYN+ I G C   +LD+A  L +     G  P  +T   L++  CK   + 
Sbjct: 347 QNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA++    +++ +      D+    +L++   K     +A    N+MF   +  ++V Y 
Sbjct: 406 DALRVKSNMISSN---CKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYT 462

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I+G+C  G + +A   F  M   G  P+  TY +L+  L +  KL +A      + + 
Sbjct: 463 SIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQED 522

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P  I+Y T+IQG C   +   A      M +  + P+   +NV+ D   + G    A
Sbjct: 523 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA 582

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           +S    ++  GV     T+ +L+   ++ G+   A  L ++M+ +G   D++TY++L+ A
Sbjct: 583 YS---FLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQA 639

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    ++ AL + D+M   G+  +I+ YT +I      G    A+ +F ++ + G    
Sbjct: 640 LCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPS 699

Query: 541 HIPFRILKKRYRRMKESDKARDI 563
              + +    Y ++   ++A  +
Sbjct: 700 ATTYTVFISSYCKIGRIEEAEHL 722



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 137/281 (48%), Gaps = 7/281 (2%)

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           L++ + Q+ +  D V YN +I  +C  G ++ A  YFC + + G   D  T N LL   C
Sbjct: 166 LYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYC 225

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           +   L +A     ++   G   ++ SY  +IQGLC    + +A   +  M+        H
Sbjct: 226 RTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLH 285

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            + ++I G  + G + +A  + D M   GV  +V+T+NA+I    + G + DA  +K  M
Sbjct: 286 TYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM 345

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
             +G  PD +TYN LI   C  G +  A +L +  + RG TP +IT+T LI G+C    +
Sbjct: 346 EQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERI 404

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRIL------KKRYRRMKES 557
            +A  V + + +    +D   + +L      K R +  KE+
Sbjct: 405 DDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 117/253 (46%), Gaps = 1/253 (0%)

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           +  +++ G LPD +TYNT++   CK+G L  A  ++ +L ++G+  D  +   ++ G C 
Sbjct: 167 YSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCR 226

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
             D+ KA   L+ M         + + ++I G      +  A  +  +M+  G S N+ T
Sbjct: 227 TSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHT 286

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +  LI    + G I DA  L  EM L G+ P V+TYN +I   C  G +  AL +   M 
Sbjct: 287 YTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 346

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
           + G  PD  TY  LI G C  G + EAEE+       G     I F  L   Y + +  D
Sbjct: 347 QNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405

Query: 559 KARDIHQKWLLRN 571
            A  +    +  N
Sbjct: 406 DALRVKSNMISSN 418



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 132/317 (41%), Gaps = 19/317 (5%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   +  +++ LC   K+  AL +  +M   G   +++ +  +++E+ K G  + A  
Sbjct: 627 KADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKS 686

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  EM      P+  TY  FI+ YC++  +++A HL   M  +G+ P+ VT+NI ++   
Sbjct: 687 LFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCG 746

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK----NGDKFQALALWN----- 285
             G +  A   L  ++   D     +  T  +L+  + K    N        +WN     
Sbjct: 747 HMGYIDRAFSTLKRMV---DASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELN 803

Query: 286 -------DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
                   M +  +   +V Y+ +I GFC    +  A      ML +   P+   Y  L+
Sbjct: 804 MVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLI 863

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
            C C      +A  F   + + G  P   SY  +I GLC  GD  +A+     +L     
Sbjct: 864 KCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYN 923

Query: 399 PEPHIWNVIIDGYGRCG 415
                W ++ DG  + G
Sbjct: 924 HNEVAWKILNDGLLKAG 940



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 19/268 (7%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +   I   C  G+I  A  L  +M + G  PDV+T+N  +N    +G +++A   ++ M 
Sbjct: 703 YTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMV 762

Query: 181 EMRPSPNCATYNAFITGYCRVN----------------ELDKALHLFSTMANNGIRPNRV 224
           +    PNC TY   +  + +++                EL+    L   M  +G+ P  V
Sbjct: 763 DASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVV 822

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           T++ ++   CK   L +A   L  +L  D      ++ T  I      K   K  A++  
Sbjct: 823 TYSSIIAGFCKATRLEEACVLLDHMLGKDI-SPNEEIYTMLIKCCCDIKLFGK--AVSFV 879

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
            DM +   Q  + +Y+ LI G C  GD   A + FC +L   +  + + +  L + L K 
Sbjct: 880 TDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKA 939

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTI 372
           G +D  S     +       D  SY  +
Sbjct: 940 GHVDFCSQLLAAMDNRHCRIDSESYSML 967



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YNL + +           +LY  +++ G+ PD +TY  +I  +C +G++  A   F  ++
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
             G+ +D      L   Y R  +  KA      WLL
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKA-----CWLL 237


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 225/478 (47%), Gaps = 45/478 (9%)

Query: 129 CLGGK--IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           CLG K  +  AL L   M +K   P+  T+N +++ LC  G +E+A  ++ EM      P
Sbjct: 97  CLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFP 155

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N  T N  +   C+  +L++A  +F + +  G  P+ VT+  L+  L KKG + +A +  
Sbjct: 156 NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLF 215

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            ++L   D    ++ +  T L+ ++F +G K     ++ ++ ++  + D+   N  ++  
Sbjct: 216 EKML---DAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCV 272

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
              G++      F  +   GFLPDV +Y+ L++ L K G+  E S+ +  + + G A D 
Sbjct: 273 FKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDA 332

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI------------------- 407
            +Y  ++ G C  G + KA E L  M EK V P    +  I                   
Sbjct: 333 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 392

Query: 408 ----------------IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
                           IDG+G+ G +  A+ I + M+  G++ NV+T+N+L+ A  +   
Sbjct: 393 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 452

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           I +A    + M      P+ +TY++LI   C +   + A   + +M ++G+ P+++TYT 
Sbjct: 453 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 512

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK-WL 568
           +I G    GN+ +A  +F + +  G   D   F  L      M  +++A + +Q  WL
Sbjct: 513 MISGLAKVGNITDAYSLFERFKANGGIPDAASFNAL---IEGMSNANRAMEAYQAGWL 567



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 187/424 (44%), Gaps = 32/424 (7%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LCLGG++  A  +  +M      P++LT N +V+ LCK   LE+A  +    S+  
Sbjct: 128 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 187

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+C TY + I G  +  ++D+A  LF  M + G   N V +  L+      G   D  
Sbjct: 188 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 247

Query: 244 KFLGEVLAD----------------------DDGKAT----------SDVITSTILMDSY 271
           K   E++                        + G+             DV + +IL+   
Sbjct: 248 KIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 307

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K G   +   +++ M Q+    D  AYN +++GFC +G +  A+    +M ++   P V
Sbjct: 308 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 367

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            TY  +++ L K  +LDEA   +      G+  + + Y ++I G    G I +A   L  
Sbjct: 368 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 427

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M++K + P  + WN ++D   +  +++ A      M       N +T++ LI    R   
Sbjct: 428 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 487

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
              AF   ++M   G+ P+V TY  +I     +G+I  A  L++     G  PD  ++  
Sbjct: 488 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNA 547

Query: 512 LIKG 515
           LI+G
Sbjct: 548 LIEG 551



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/494 (23%), Positives = 220/494 (44%), Gaps = 37/494 (7%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   + ++I  LC  G++G A  L  +M  + +VP    +N ++      G  E A 
Sbjct: 14  LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAY 73

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++  + E    P+  ++N+ +T   +  ++D+AL LF  M  +   PN  T+NI++  L
Sbjct: 74  KLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDML 132

Query: 234 CKKGLLGDAVKFLGE--------------VLADDDGKA------------------TSDV 261
           C  G + +A + L E              ++ D   KA                    D 
Sbjct: 133 CLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDC 192

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T   L+D   K G   +A  L+  M       + V Y  LI  F ++G        F +
Sbjct: 193 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKE 252

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           +++RG  PD+   NT ++C+ K G++++    +  +   G  PD  SY  +I GL   G 
Sbjct: 253 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 312

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
             +      +M ++    +   +N ++DG+ + G +  A+ I + M    V   V T+ A
Sbjct: 313 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 372

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           ++    +   + +A+ L +E    GI  +V  Y+ LI     +G I  A  + +EM+++G
Sbjct: 373 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 432

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA- 560
           +TP++ T+  L+        + EA   F  ++ +    +   + IL     R+++ +KA 
Sbjct: 433 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 492

Query: 561 ---RDIHQKWLLRN 571
              +D+ ++ L+ N
Sbjct: 493 VFWQDMQKQGLVPN 506



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 3/260 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D R +  +I  L   G+      +   M Q+G   D   +N +V+  CK G + KA  ++
Sbjct: 296 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL 355

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM E    P  ATY A + G  +++ LD+A  LF    + GI  N V ++ L+    K 
Sbjct: 356 EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKV 415

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A   L E++       T +V T   L+D+  K  +  +AL  +  M +     + 
Sbjct: 416 GRIDEAYLILEEMMKKG---LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNT 472

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y++LING C     + AF ++  M K+G +P+V+TY T+++ L K G + +A   +  
Sbjct: 473 YTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 532

Query: 357 LSKTGVAPDQISYKTIIQGL 376
               G  PD  S+  +I+G+
Sbjct: 533 FKANGGIPDAASFNALIEGM 552



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/360 (20%), Positives = 163/360 (45%), Gaps = 4/360 (1%)

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A   F  +   G++P+ V++  ++  LCK G LG+A +   ++ A+   ++         
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE---RSVPCAYAYNT 58

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           ++  Y   G    A  L   + ++     +V++N ++        +  A + F +++K+ 
Sbjct: 59  MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKD 117

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+  TYN +++ LC  G+++EA      +    + P+ ++   ++  LC    + +A 
Sbjct: 118 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY 177

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           +   S  ++   P+   +  +IDG G+ G +  A+ + + ML  G ++N   + +LI   
Sbjct: 178 KIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNF 237

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G   D   + KE++  G  PD+   N  +      G +     +++++   G  PD+
Sbjct: 238 FIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV 297

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            +Y+ LI G    G  +E   +F  ++  G A+D   +  +   + +  +  KA +I ++
Sbjct: 298 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 357



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 30/46 (65%)

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           +A + + E+  +G+ PD ++YT +I   C  G + EAEE+FA+++ 
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEA 46


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 210/441 (47%), Gaps = 10/441 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  VI   C  G++  A  L  +M ++G   DVL H+ L+  LC+ G +++A    + M 
Sbjct: 114 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 173

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTM-----ANNGIRPNRVTHNILVHALCK 235
           E   SPN  TYN  + G C+ N +D+AL LF  M     A++G  P+ ++++ ++ ALCK
Sbjct: 174 E-ECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCK 232

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
              +  A ++   + A        +V+T + L+D   K     + L L   M +K    +
Sbjct: 233 AQRVDKAYEYFKRMRAVG---CAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGIN 289

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           I+ +N +++    N +   A  +F ++LK G  P+V+TYN  ++ LCK G++DEA     
Sbjct: 290 IIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILL 349

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + ++ V PD I+Y +II G C  G + KA +    M+    +P P  +  ++ G+    
Sbjct: 350 EMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHK 409

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
               AF + + M++ G    + T+N L+       S+  A  +  +M      PD  TY 
Sbjct: 410 KSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYA 469

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            LI   C    +  A +  D M    + P+      L++  C +G + EA  V   +  +
Sbjct: 470 PLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEV 529

Query: 536 GLAIDHIPFRIL-KKRYRRMK 555
           G       F+IL ++ Y R K
Sbjct: 530 GCQPLGETFKILVEELYLRKK 550



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 134/532 (25%), Positives = 231/532 (43%), Gaps = 83/532 (15%)

Query: 94  LKENLDRLKTM-RDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWL-----RRKMIQK 147
           + E L++ K+M  +  P   T  T       V+  LC   +I  AL L     +R     
Sbjct: 162 IDEALEQFKSMGEECSPNVITYNT-------VVNGLCKANRIDEALELFDDMEKRYEASH 214

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN----- 202
           G  PDV++++ +++ LCK   ++KA    + M  +  +PN  TY++ I G C+V+     
Sbjct: 215 GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSEC 274

Query: 203 ------------------------------ELDKALHLFSTMANNGIRPNRVTHNILVHA 232
                                         E +KA   F  +  +G +PN VT+N+ VH 
Sbjct: 275 LELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHG 334

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LCK G + +A + L E++   + K T DVIT + ++D + K G   +A  ++  M     
Sbjct: 335 LCKAGRVDEAYRILLEMV---ESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHEC 391

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
               V +  L++GF  +     AF     M+  GF+P + TYN L++C+C    ++ A  
Sbjct: 392 IPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALE 451

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            Y  + +    PD  +Y  +IQ LC    + +A+EFL  M   +VVP   I + +++   
Sbjct: 452 IYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLC 511

Query: 413 RCGDLSNAFSIRD--------------------------------LMLSFGVSSNVFTFN 440
           + G++  A S+ D                                L+ S G  ++  T++
Sbjct: 512 KQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYS 571

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
             +    + G   +A  + ++M+L G+ PD  TY  ++ + C L  +  A+  +++M  R
Sbjct: 572 LCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASR 631

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           G  P ++TYT LI   C+     EA  +F  +   G        R L    R
Sbjct: 632 GCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLR 683



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 194/416 (46%), Gaps = 50/416 (12%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T   L+N   K    E+A  +++E  E    PN   Y   I G+C+  ++D+A  L   M
Sbjct: 78  TCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEM 137

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAV---KFLGEVLADDDGKATSDVITSTILMDSY 271
              G++ + + H+ L+  LC+KG + +A+   K +GE       + + +VIT   +++  
Sbjct: 138 KERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-------ECSPNVITYNTVVNGL 190

Query: 272 FKNGDKFQALALWNDMFQK-----NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
            K     +AL L++DM ++       + D+++Y+ +I+  C    +  A+ YF +M   G
Sbjct: 191 CKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVG 250

Query: 327 FLPDVITYNTLLNCLCKQGKLDE-----------------------------------AS 351
             P+V+TY++L++ LCK  +  E                                   A 
Sbjct: 251 CAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKAC 310

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
            F+  L K+G  P+ ++Y   + GLC  G + +A   LL M+E  V P+   ++ IIDG+
Sbjct: 311 QFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGF 370

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            + G +  A  +   M+      +  TF  L+   +      +AF + ++M+  G  P +
Sbjct: 371 CKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGL 430

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            TYN+L+   C    +  AL++Y +M R+   PD  TY  LI+  C    + EA+E
Sbjct: 431 QTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKE 486



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 175/372 (47%), Gaps = 10/372 (2%)

Query: 200 RVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           +V + D A   F    N  G + N  T  +L++A  K     +A + L E L   +    
Sbjct: 52  QVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEEL---EPLCF 108

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            + I  T +++ + K G   QA  L ++M ++ ++ D++ ++ LI G C  G I  A   
Sbjct: 109 PNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQ 168

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT-----GVAPDQISYKTII 373
           F  M +    P+VITYNT++N LCK  ++DEA   +  + K      G  PD ISY T+I
Sbjct: 169 FKSMGEECS-PNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVI 227

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
             LC    + KA E+   M      P    ++ +IDG  +    S    +   M   G  
Sbjct: 228 DALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFG 287

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            N+  FNA++ A  +      A    + +L  G  P+V TYN+ +   C  G +  A ++
Sbjct: 288 INIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRI 347

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
             EM+   +TPD+ITY+ +I G C  G M +A++VF ++         + F  L   +  
Sbjct: 348 LLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSE 407

Query: 554 MKESDKARDIHQ 565
            K+S +A  +H+
Sbjct: 408 HKKSREAFRVHE 419



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 110/256 (42%), Gaps = 10/256 (3%)

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           K GF  +  T   LLN   K  + +EA        +    P++I Y T+I G C  G + 
Sbjct: 69  KPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVD 128

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG--VSSNVFTFNA 441
           +A E L  M E+ V  +  + + +I G  R G +  A    +   S G   S NV T+N 
Sbjct: 129 QAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEAL---EQFKSMGEECSPNVITYNT 185

Query: 442 LILAETRGGSIFDAFSL-----KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           ++    +   I +A  L     K+     G  PDV +Y+ +I A C    +  A + +  
Sbjct: 186 VVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKR 245

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M   G  P+++TY+ LI G C      E  E+   ++  G  I+ I F  +     +  E
Sbjct: 246 MRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDE 305

Query: 557 SDKARDIHQKWLLRNK 572
            +KA    ++ L   K
Sbjct: 306 QEKACQFFERLLKSGK 321


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 182/334 (54%), Gaps = 3/334 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+ +G  PDV T+  ++N LCKIG+   A  + ++M E    P+  TY+  I   C+   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +++AL +FS M   GI PN  T+N L+  LC      +A   L E+++ +      +++T
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN---IMPNIVT 117

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            ++L++ + K G+ F+A  +   M +  ++ ++V Y+ L+NG+ L  ++  A   F  M+
Sbjct: 118 FSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMI 177

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            +G  PDV +YN L+N  CK  ++ EA   +  +   G+ PD +SY T+I GLC  G + 
Sbjct: 178 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 237

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A +   +ML    +P+   +++++DG+ + G L+ AF +   M S  +  N+  +N LI
Sbjct: 238 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 297

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
            A  +  ++ +A  L  E+ + G+ P++  + L 
Sbjct: 298 DAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLF 331



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 165/322 (51%), Gaps = 3/322 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   +  +I  LC  G+   A  L +KM + G  PDV+T++ +++ LCK   + +A  
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +   M     SPN  TYN+ I G C  +   +A  + + M +  I PN VT ++L++  C
Sbjct: 67  IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G + +A   L  +    +     +V+T + LM+ Y    + F+A  L++ M  K  + 
Sbjct: 127 KEGNVFEARGVLKTM---TEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKP 183

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D+ +YN+LING+C    I  A   F +M+ +G  PD+++YNTL++ LC+ G+L EA   +
Sbjct: 184 DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF 243

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G  PD  +Y  ++ G C  G + KA     +M    + P   ++N++ID   + 
Sbjct: 244 KNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 303

Query: 415 GDLSNAFSIRDLMLSFGVSSNV 436
            +L  A  +   +   G+  N+
Sbjct: 304 RNLKEARKLFSELFVQGLQPNM 325



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 172/324 (53%), Gaps = 3/324 (0%)

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G +P+  T+  +++ LCK   +G+ V   G      +     DV+T + ++DS  K
Sbjct: 1   MVARGYQPDVHTYTTIINGLCK---IGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCK 57

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           +    +AL +++ M  K I  +I  YN LI G C       A A   +M+    +P+++T
Sbjct: 58  DRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVT 117

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           ++ L+N  CK+G + EA      +++ GV P+ ++Y +++ G  +  ++ +AR+    M+
Sbjct: 118 FSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMI 177

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            K   P+   +N++I+GY +   +  A  + + M+  G++ ++ ++N LI    + G + 
Sbjct: 178 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 237

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A  L K ML +G  PD+ TY++L+   C  G++  A +L+  M    + P+++ Y  LI
Sbjct: 238 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 297

Query: 514 KGHCARGNMKEAEEVFAKIQTLGL 537
              C   N+KEA ++F+++   GL
Sbjct: 298 DAMCKSRNLKEARKLFSELFVQGL 321



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 146/261 (55%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M  +  Q D+  Y  +ING C  G+  +A   F +M + G  PDV+TY+T+++ LCK  +
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           ++EA   +  +   G++P+  +Y ++IQGLC      +A   L  M+  +++P    +++
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +I+ + + G++  A  +   M   GV  NV T+++L+   +    +F+A  L   M+  G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             PDVF+YN+LI   C    I  A QL++EM+ +G+TPDI++Y  LI G C  G ++EA 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 527 EVFAKIQTLGLAIDHIPFRIL 547
           ++F  + T G   D   + IL
Sbjct: 241 DLFKNMLTNGNLPDLCTYSIL 261



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 156/303 (51%), Gaps = 3/303 (0%)

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DV T T +++   K G+   A  L+  M +   Q D+V Y+ +I+  C +  ++ A   F
Sbjct: 9   DVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIF 68

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M  +G  P++ TYN+L+  LC   +  EAS     +    + P+ +++  +I   C  
Sbjct: 69  SYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKE 128

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G++ +AR  L +M E  V P    ++ +++GY    ++  A  + D+M++ G   +VF++
Sbjct: 129 GNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSY 188

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N LI    +   I +A  L  EM+  G+ PD+ +YN LI   C LG +  A  L+  ML 
Sbjct: 189 NILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLT 248

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKE 556
            G  PD+ TY+ L+ G C +G + +A  +F  +Q+  L  + + + IL     + R +KE
Sbjct: 249 NGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKE 308

Query: 557 SDK 559
           + K
Sbjct: 309 ARK 311



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 147/316 (46%), Gaps = 43/316 (13%)

Query: 91  DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV 150
           D  + E LD    M+  G     +  +   + ++I+ LC   +   A  +  +M+    +
Sbjct: 58  DRRVNEALDIFSYMKAKG-----ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIM 112

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+++T + L+N  CK G++ +A  V++ M+EM   PN  TY++ + GY    E+ +A  L
Sbjct: 113 PNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKL 172

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M   G +P+  ++NIL++  CK   +G+A +                          
Sbjct: 173 FDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQ-------------------------- 206

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                       L+N+M  + +  DIV+YN LI+G C  G +  A   F  ML  G LPD
Sbjct: 207 ------------LFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPD 254

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           + TY+ LL+  CKQG L +A   +  +  T + P+ + Y  +I  +C   ++ +AR+   
Sbjct: 255 LCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFS 314

Query: 391 SMLEKSVVPEPHIWNV 406
            +  + + P    W +
Sbjct: 315 ELFVQGLQPNMKHWKL 330


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 201/429 (46%), Gaps = 14/429 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G +  A  L   M       D  T+  LVN  C+ G +    H +    E+ 
Sbjct: 202 LIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQM----HEVASFMELA 257

Query: 184 PSPNCA----TYNAFITGYCRVNELDKALHLF-STMANNGIRPNRVTHNILVHALCKKGL 238
               CA     YN  I G+ R   L +A  LF STM    + P+  T+N+L+ ALCK   
Sbjct: 258 RHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESV-PDVFTYNLLI-ALCKSKQ 315

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L +A+    E    + G    DV T + LMD++ K G   +AL ++ +M +     D V 
Sbjct: 316 LEEALTLFQEA---EQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVV 372

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           YNVLI+     G +  A      M ++G +PD  TYN +++ L   G+ ++A  F+G++ 
Sbjct: 373 YNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMK 432

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           +   +PD ++Y T++ GL       +A +    M     +P+   +  +ID   + G + 
Sbjct: 433 RRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRME 492

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           +A      ++  G + N + +NALI    R G +   + L ++M+    FPD  TY +L+
Sbjct: 493 DALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILV 552

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
                 GH  +A++L  EM+R G TP + TY  LI+     G +++A  +F ++   G  
Sbjct: 553 LGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFN 612

Query: 539 IDHIPFRIL 547
            D   +  L
Sbjct: 613 PDMQTYSAL 621



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 205/466 (43%), Gaps = 9/466 (1%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNE 162
           MR+T    C    D   +  +I   C  G    AL + R++ Q+G+  P+ ++ + LV  
Sbjct: 115 MRET----CDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIF 170

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           LCK+     A  V +EM       +    N  I   CR+  L +A  L   M  +    +
Sbjct: 171 LCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARD 230

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
             T+ ILV+A C+ G + +   F+   LA  DG A S  +    ++  + + G   +A  
Sbjct: 231 AFTYGILVNAHCRAGQMHEVASFME--LARHDGCALS-AVNYNFIIQGFIRCGRLAEATQ 287

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           L+     K    D+  YN+LI   C +  +  A   F +  + G + DV TY+ L++   
Sbjct: 288 LFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFG 346

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K G+  +A   +  + K G  PD + Y  +I  L   G + +A E L  M  K ++P+  
Sbjct: 347 KAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 406

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +N++ID    CG    A+S   +M     S +V T+N L+    +     +A  L  EM
Sbjct: 407 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEM 466

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
             +   PD+ T+  LI      G +  AL+    +++ G  P+   Y  LI G C  G +
Sbjct: 467 QANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQV 526

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            +  E+F  +       D I + IL   + R   +  A ++ Q+ +
Sbjct: 527 DKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMV 572



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 179/415 (43%), Gaps = 41/415 (9%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEM-RPSPNCATYNAFITGYCRVNELDKALH 209
           PD +     ++ LC++  +E+A  +  +M E    +P+   YN  I GYC+  + D+AL 
Sbjct: 87  PDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALD 146

Query: 210 LFSTMANNG-IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           +F  +   G  +PN V+ + LV  LCK     DA                          
Sbjct: 147 MFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA-------------------------- 180

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
                       LA++ +M    ++ D+   N LI+  C  G +  A      M      
Sbjct: 181 ------------LAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACA 228

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
            D  TY  L+N  C+ G++ E + F  +    G A   ++Y  IIQG    G + +A + 
Sbjct: 229 RDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQL 288

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
             S + K  VP+   +N++I    +   L  A ++       GV  +VFT++ L+ A  +
Sbjct: 289 FESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGK 347

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G    A  +   M   G  PD   YN+LI      G +  AL+L ++M R+GI PD  T
Sbjct: 348 AGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRT 407

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           Y  +I    + G  ++A   F  ++    + D + +  L    ++++ +D+A D+
Sbjct: 408 YNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDL 462



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 188/413 (45%), Gaps = 5/413 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL   + +++ G   D  T   +V E+CK+G  E    ++ E+ +     +  T    I 
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 197 GYCRVNELDKALHLFSTM-ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            + R  +LD A+ +   M   N  +P+ V     +H LC+   +  A+    ++    D 
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCD- 120

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNGDISS 314
               DV+    L+  Y K GD  +AL ++  + Q+ + + + V+++ L+   C     + 
Sbjct: 121 -CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD 179

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A A F +ML  G   DV   NTL++C C+ G L +A      ++    A D  +Y  ++ 
Sbjct: 180 ALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVN 239

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
             C  G + +   F+              +N II G+ RCG L+ A  + +  ++     
Sbjct: 240 AHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVP 299

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +VFT+N L++A  +   + +A +L +E    G+  DVFTY+ L+ A    G    AL+++
Sbjct: 300 DVFTYN-LLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVF 358

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             M + G  PD + Y  LI     +G + EA E+   +   G+  D   + I+
Sbjct: 359 YNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIV 411



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/295 (21%), Positives = 113/295 (38%), Gaps = 3/295 (1%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           ALA +  + +  +  D      ++   C  G          ++ ++G     +T    + 
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 340 CLCKQGKLDEASHFYGVLSKTGVA-PDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SV 397
              + G LD A      + +     PD +++   +  LC    + +A      M E    
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
            P+   +N +I GY + GD   A  + R L        N  +F+ L++   +     DA 
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
           ++ +EML  G+  DV   N LI  +C LG +  A +L   M       D  TY  L+  H
Sbjct: 182 AVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAH 241

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           C  G M E        +  G A+  + +  + + + R     +A  + +  + + 
Sbjct: 242 CRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKE 296



 Score = 38.9 bits (89), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 21/85 (24%), Positives = 41/85 (48%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           + C+   D   +  ++      G    A+ L ++M+++G  P + T+N L+  L   G +
Sbjct: 537 IECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQV 596

Query: 170 EKADHVIREMSEMRPSPNCATYNAF 194
           E A  + +EM     +P+  TY+A 
Sbjct: 597 EDAYTLFKEMIAKGFNPDMQTYSAL 621


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 211/455 (46%), Gaps = 39/455 (8%)

Query: 109 PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           P+R  L T +  + A++  L   G +  A+ +   M      PD   +  +V+ LC+ G 
Sbjct: 134 PLRGCLRTAFT-YTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGR 192

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
            E+A+ ++ E       PN   YNA I GYC   E++ AL +F  M  N   PN  T+  
Sbjct: 193 TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTE 252

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L+H LC                                      K+G   +A+ L++ M 
Sbjct: 253 LIHGLC--------------------------------------KSGKVERAMVLFSRMV 274

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           +  ++ ++V Y  LI G C  G +  AF     M   G +P+  T++ L++ LCK+ K++
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA  F G L K GV  +++ Y ++I GLC  G I  A E +  M+ +  VP+ H ++ +I
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLI 394

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           DG  R   LS A  + + M+  G+ ++  T+  +I    R         +  +M+  GI 
Sbjct: 395 DGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGIN 454

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PD+ TY + + + C  G +  A  +  +M+ RG+ P+++TY  LI+G+   G + +A   
Sbjct: 455 PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFST 514

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           F  +   G   +   + +L +   +   SD + DI
Sbjct: 515 FEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 167/393 (42%), Gaps = 3/393 (0%)

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           +  ++   P+ N  TY   I  YC   ++  A    +++ + G+ P+   +   V   C+
Sbjct: 60  MESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCR 119

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G+L  A +    VL    G       T T L+      G   +A+ ++  M   +   D
Sbjct: 120 AGMLTHACRVF--VLMPLRG-CLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPD 176

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
              Y  +++G C  G    A     + +  GF P+++ YN L++  C  G+++ A   + 
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            +     +P+  +Y  +I GLC  G + +A      M+E  + P    +  +I G    G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            L  AF +  LM + G+  N +TF+ LI A  +   + +A      ++  G+  +   Y 
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            LI   C  G I  A +L  +M+  G  PD  +Y+ LI G C +  + +A  +   +   
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+    + + I+     R   S+  + I  K +
Sbjct: 417 GIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449


>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
 gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 185/394 (46%), Gaps = 4/394 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +   LW+ R M + G  P + T+N+L+N L     +E A+ V+  M   +  P+  TY
Sbjct: 146 GMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTY 205

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYC+V +  KA   F  M    + P+++T+  L+ A   +G     +    E+  
Sbjct: 206 NTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEM-- 263

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
           D++G        S ++     K G   +  A++  M QK  + ++  Y  LI+     G+
Sbjct: 264 DENGLEIPPHAYSLVI-GGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGN 322

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F +M K G  PDV+TY  ++NC+CK G+LDEA  +       GVA + + Y +
Sbjct: 323 MGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSS 382

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GL   G + +A +    M++K   P+ + +N +ID   +CG    A +    M   G
Sbjct: 383 LIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEG 442

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
               V+T+  +I    R     +A  +   M+  GI P    +  L    C  G +  A 
Sbjct: 443 CDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARAC 502

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           +L DE+   G+ P+   + +++   C  G +KEA
Sbjct: 503 KLLDELAPMGVIPE-TAFEDMLNVLCKAGRIKEA 535



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 194/418 (46%), Gaps = 5/418 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +V+ I  L + G +     +  K    G + +V   N L+     +G +E+   V R M 
Sbjct: 100 YVSSIDVLAINGDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMK 159

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E    P+  TYN  + G      ++ A  +   M N  I P+ VT+N ++   C+ G   
Sbjct: 160 ENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQ 219

Query: 241 DAV-KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            A  KF    L +       D IT   L+ + +  GD    L+L+++M +  ++    AY
Sbjct: 220 KAFEKFRDMELRN----VAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAY 275

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           +++I G C  G     +A F +M+++G   +V  Y  L++   K G + EA   +  + K
Sbjct: 276 SLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKK 335

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ PD ++Y  ++  +C  G + +A E+L       V     +++ +IDG G+ G +  
Sbjct: 336 EGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHE 395

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  + + M+  G   + + +NALI A  + G   +A +  K M  +G    V+TY ++I 
Sbjct: 396 AEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMIN 455

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
                     AL+++D M+ +GITP    +  L  G C  G +  A ++  ++  +G+
Sbjct: 456 GLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGV 513



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 143/301 (47%)

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +V  +  L+ S+   G   + L +W  M +  ++  +  YN L+NG   +  I SA    
Sbjct: 131 NVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVL 190

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M      PDV+TYNT++   C+ GK  +A   +  +    VAPD+I+Y T+IQ     
Sbjct: 191 EVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAE 250

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           GD          M E  +   PH ++++I G  + G     +++ + M+  G   NV  +
Sbjct: 251 GDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIY 310

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
            ALI +  + G++ +A  L + M  +G+ PDV TY +++   C  G +  A++  +    
Sbjct: 311 TALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRV 370

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G+  + + Y+ LI G    G + EAE++F ++   G   D   +  L     +  ++D+
Sbjct: 371 NGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDE 430

Query: 560 A 560
           A
Sbjct: 431 A 431



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 139/297 (46%), Gaps = 10/297 (3%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           +R+  P + T       ++ +I+     G     L L  +M + G       ++ ++  L
Sbjct: 230 LRNVAPDKIT-------YMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGL 282

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           CK G   +   V  +M +     N A Y A I    +   + +A+ LF  M   G+ P+ 
Sbjct: 283 CKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDV 342

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
           VT+ ++V+ +CK G L +A+++L       +G A + ++ S+ L+D   K G   +A  L
Sbjct: 343 VTYGVVVNCMCKSGRLDEAMEYLE--FCRVNGVAVNAMLYSS-LIDGLGKAGRVHEAEKL 399

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           + +M +K    D   YN LI+     G    A A+F +M   G    V TY  ++N L +
Sbjct: 400 FEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFR 459

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           + K +EA   + ++   G+ P   +++ +  GLC+ G + +A + L  +    V+PE
Sbjct: 460 EHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPE 516



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 127/261 (48%), Gaps = 4/261 (1%)

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           QK    ++  Y   I+   +NGD+ +  + FC+    GFL +V   N+L+      G ++
Sbjct: 90  QKKYTHNLQCYVSSIDVLAINGDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVE 149

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV-PEPHIWNVI 407
           E    +  + + GV P   +Y  ++ GL ++   +++ E +L ++E   + P+   +N +
Sbjct: 150 ELLWVWRGMKENGVEPSLFTYNFLLNGL-VNSVFIESAERVLEVMENGKIGPDVVTYNTM 208

Query: 408 IDGYGRCGDLSNAFS-IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           I GY + G    AF   RD+ L   V+ +  T+  LI A    G      SL  EM  +G
Sbjct: 209 IKGYCQVGKTQKAFEKFRDMELR-NVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENG 267

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           +      Y+L+IG  C  G       ++++M+++G   ++  YT LI  +   GNM EA 
Sbjct: 268 LEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAM 327

Query: 527 EVFAKIQTLGLAIDHIPFRIL 547
            +F +++  GL  D + + ++
Sbjct: 328 LLFERMKKEGLEPDVVTYGVV 348



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 115/272 (42%), Gaps = 39/272 (14%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT------------------------ 149
           LE     +  VI  LC  GK      +  KMIQKG                         
Sbjct: 268 LEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAM 327

Query: 150 -----------VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
                       PDV+T+  +VN +CK G L++A   +        + N   Y++ I G 
Sbjct: 328 LLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGL 387

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            +   + +A  LF  M   G  P+   +N L+ AL K G   +A+ F   +  +D+G   
Sbjct: 388 GKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRM--EDEG-CD 444

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
             V T TI+++  F+     +AL +W+ M  K I     A+  L  G CL+G ++ A   
Sbjct: 445 QTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKL 504

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             ++   G +P+   +  +LN LCK G++ EA
Sbjct: 505 LDELAPMGVIPET-AFEDMLNVLCKAGRIKEA 535


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 206/426 (48%), Gaps = 4/426 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI+ L    +   A+ L   ++  G VPDV T+  L++ LCK   L +A ++  +M E  
Sbjct: 367 VIKGLLRDKRWKDAIGLLELVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAG 425

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY++ + GYC    +D+AL L+S M + G  PN VT+  L+    KK    +A 
Sbjct: 426 VKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAY 485

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E+    +G +  D  T  IL++  +      +   +      +      + YN +I
Sbjct: 486 ALLNEM--RQNGVSCGD-YTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSII 542

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NGF   G + SAF  + QM K+G  P+++TY + ++  C+    D A      + + G+ 
Sbjct: 543 NGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQ 602

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y   I   C  G++ +A  FL+ +L+  + P+  ++N  + GY     ++ A   
Sbjct: 603 PDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKF 662

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M+   V ++   +  LI   ++ G++  A  L  EM+ + + PD  T+  L    C 
Sbjct: 663 YYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCR 722

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G I  A +L D+M R  ++P+I+TY  LI      G ++EA ++  ++ + G+  D   
Sbjct: 723 SGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTT 782

Query: 544 FRILKK 549
           + IL +
Sbjct: 783 YDILPR 788



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 211/474 (44%), Gaps = 37/474 (7%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM------ 182
           CL G++G AL L  +++  G  P  +T+  L+      G  ++   + R+M E       
Sbjct: 302 CLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLST 361

Query: 183 ----------------------------RPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
                                          P+  TY   I   C+  +L +A++L+  M
Sbjct: 362 YEFNLVIKGLLRDKRWKDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKM 421

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G++P+ VT++ L+   C+KG + +A+K   E+   D G   ++V T T LM  Y K 
Sbjct: 422 KEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEM--PDKGFPPNEV-TYTTLMKGYIKK 478

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
                A AL N+M Q  +      YN+LING  +   +        + L  GF+P  +TY
Sbjct: 479 KAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTY 538

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N+++N   K G +  A   Y  + K G+ P+ ++Y + I G C       A + L+ +  
Sbjct: 539 NSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRR 598

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             + P+   +N  ID + + G++S A     L+L  G++ +V  +N+ +        + +
Sbjct: 599 DGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAE 658

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A      M+   +  D   Y  LI     +G++  AL+LY EM+   + PD  T+T L  
Sbjct: 659 ASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTH 718

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G C  G++  A+ +   ++ L ++ + + + +L     R  +  +A  +H + L
Sbjct: 719 GLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEML 772



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 189/421 (44%), Gaps = 36/421 (8%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           G     AL L  +M  KG   D   ++ ++    + G    A  +  EM+     P+   
Sbjct: 163 GASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERV 222

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y   I+G C++ + D+AL +   M   G  P  +T++ +V  L K G + +A++   ++L
Sbjct: 223 YAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQML 282

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                K   DV+ +T+LM  Y  +G+  +AL L++++    +    V Y VLI G    G
Sbjct: 283 LATGKKM--DVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEG 340

Query: 311 DISSAFAYFCQMLKRGFL----------------------------------PDVITYNT 336
                +    QM+++G L                                  PDV TY  
Sbjct: 341 MSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGVPDVFTYGC 400

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L++ LCK  KL EA + +  + + GV P  ++Y +++ G C  G + +A +    M +K 
Sbjct: 401 LIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG 460

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P    +  ++ GY +     NA+++ + M   GVS   +T+N LI        + +  
Sbjct: 461 FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVD 520

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            + K  L +G  P   TYN +I      G +  A  +Y +M ++GITP+I+TYT  I G+
Sbjct: 521 EMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGY 580

Query: 517 C 517
           C
Sbjct: 581 C 581



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 202/452 (44%), Gaps = 40/452 (8%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D R +   I  LC       AL +  KM + G  P  LT++ +V+ L K+G +++A 
Sbjct: 216 VKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEAL 275

Query: 174 HVIREM-SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV-- 230
            +  +M        +       + GYC   E+ KAL LF  + ++G+ P  VT+ +L+  
Sbjct: 276 RLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKG 335

Query: 231 ----------HALCK------------------KGLL-----GDAVKFLGEVLADDDGKA 257
                     + LC+                  KGLL      DA+  L E++ D     
Sbjct: 336 CDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLL-ELVVD---TG 391

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
             DV T   L+    K+    +A+ LW+ M +  ++  IV Y+ L+ G+C  G +  A  
Sbjct: 392 VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALK 451

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            + +M  +GF P+ +TY TL+    K+   D A      + + GV+    +Y  +I GL 
Sbjct: 452 LYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLY 511

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
           +   + +  E L   L +  VP    +N II+G+ + G + +AF +   M   G++ N+ 
Sbjct: 512 MVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIV 571

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T+ + I    R      A  L   +  DGI PD+  YN  I   C  G++  AL     +
Sbjct: 572 TYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLL 631

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           L+ G+TPD+  Y   + G+     M EA + +
Sbjct: 632 LKDGLTPDVTVYNSFVTGYKNLKMMAEASKFY 663



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 90/227 (39%), Gaps = 38/227 (16%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  ++ D   + A I   C  G +  AL     +++ G  PDV  +N  V     +  + 
Sbjct: 598 RDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMA 657

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A      M + R   +   Y   I G+ +V  +  AL L+S M  N + P+  T   L 
Sbjct: 658 EASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALT 717

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           H LC+ G              D DG                        A  L +DM + 
Sbjct: 718 HGLCRSG--------------DIDG------------------------AKRLLDDMRRL 739

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
           ++  +IV YN+LIN    +G +  AF    +ML  G +PD  TY+ L
Sbjct: 740 DVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/318 (20%), Positives = 120/318 (37%), Gaps = 35/318 (11%)

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           ++ M  + +  D  +   L+         + A   F +M  +G   D   Y+ ++    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G   +A   +  ++  GV PD+  Y   I GLC   D  +A + L  M E    P    
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 404 WNVIIDGYGRCGDLSNAFSIRD-LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
           ++ ++D   + G +  A  ++D ++L+ G   +V     L+      G +  A  L  E+
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI-------------------- 502
           + DG+ P   TY +LI      G      +L  +M+ +G+                    
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRW 377

Query: 503 --------------TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
                          PD+ TY  LI   C    + EA  ++ K++  G+    + +  L 
Sbjct: 378 KDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 549 KRYRRMKESDKARDIHQK 566
             Y      D+A  ++ +
Sbjct: 438 LGYCEKGRMDEALKLYSE 455



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 2/144 (1%)

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M++ GV  +  +   L++   RG S  DA +L  EM   G + D   Y+++I A C  G 
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRA-CVRGG 199

Query: 487 IHL-ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           +H  A++L+DEM   G+ PD   Y   I G C   +   A +V  K++  G     + + 
Sbjct: 200 MHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYS 259

Query: 546 ILKKRYRRMKESDKARDIHQKWLL 569
            +     ++   D+A  +  + LL
Sbjct: 260 SVVDVLVKVGRMDEALRLKDQMLL 283


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 208/434 (47%), Gaps = 4/434 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++  A+ +  +M  +G  P   T N++V  + ++G +E A+++  EM      PNC +Y
Sbjct: 146 GRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSY 205

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              + GYC++  + ++      M   G   +  T +++V   C+KG +  A+ +      
Sbjct: 206 RVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFC- 264

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     ++I  T +++   K G   QA  +  +M  +  + ++  +  LI+G C  G 
Sbjct: 265 --EMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGW 322

Query: 312 ISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
              AF  F ++++     P+V+TY  +++  C+  K++ A      + + G+AP+  +Y 
Sbjct: 323 TEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYT 382

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T+I G C  G+  +A E +  M E+   P    +N I+DG  + G +  A+ +       
Sbjct: 383 TLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRN 442

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+ ++  T+  LI    +   I  A  L  +M+  GI PD+ +Y  LI   C    +  +
Sbjct: 443 GLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKES 502

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
              ++E +R G+ P   TYT +I G+C  GN++ A + F ++   G A D I +  L   
Sbjct: 503 EMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISG 562

Query: 551 YRRMKESDKARDIH 564
             +  + D+AR ++
Sbjct: 563 LCKQSKLDEARCLY 576



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 196/380 (51%), Gaps = 4/380 (1%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           +V    +IG +++A  ++ EM     +P+  T N  +     +  ++ A +LF  M   G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           ++PN V++ ++V   CK G + ++ ++LG ++   +     D  T ++++  + + G   
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMI---ERGFVVDNATLSLIVREFCEKGFVT 254

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +AL  +    +  ++ +++ +  +I G C  G +  AF    +M+ RG+ P+V T+  L+
Sbjct: 255 RALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALI 314

Query: 339 NCLCKQGKLDEASH-FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           + LCK+G  ++A   F  ++      P+ ++Y  +I G C    + +A   L  M E+ +
Sbjct: 315 DGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGL 374

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P  + +  +IDG+ + G+   A+ + ++M   G S NV T+NA++    + G + +A+ 
Sbjct: 375 APNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYK 434

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           + K    +G+  D  TY +LI   C    I  AL L+++M++ GI PDI +YT LI   C
Sbjct: 435 VLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFC 494

Query: 518 ARGNMKEAEEVFAKIQTLGL 537
               MKE+E  F +    GL
Sbjct: 495 REKRMKESEMFFEEAVRFGL 514



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 180/388 (46%), Gaps = 3/388 (0%)

Query: 130 LGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCA 189
           LG  + +  WL   MI++G V D  T + +V E C+ G + +A    R   EM   PN  
Sbjct: 215 LGNVLESDRWLG-GMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLI 273

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            +   I G C+   + +A  +   M   G +PN  TH  L+  LCKKG    A +   ++
Sbjct: 274 NFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL 333

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +  ++ K   +V+T T ++  Y ++    +A  L + M ++ +  +   Y  LI+G C  
Sbjct: 334 VRSENHKP--NVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKA 391

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G+   A+     M + GF P+V TYN +++ LCK+G++ EA        + G+  D+++Y
Sbjct: 392 GNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTY 451

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             +I   C   +I +A      M++  + P+ H +  +I  + R   +  +    +  + 
Sbjct: 452 TILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVR 511

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
           FG+     T+ ++I    R G++  A      M   G   D  TY  LI   C    +  
Sbjct: 512 FGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDE 571

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHC 517
           A  LYD M+ +G+TP  +T   L   +C
Sbjct: 572 ARCLYDAMIEKGLTPCEVTRVTLAYEYC 599



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 167/362 (46%), Gaps = 4/362 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R+ C  G +  ALW  R+  + G  P+++    ++  LCK G +++A  ++ EM    
Sbjct: 243 IVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRG 302

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMA-NNGIRPNRVTHNILVHALCKKGLLGDA 242
             PN  T+ A I G C+    +KA  LF  +  +   +PN +T+  ++   C+   +  A
Sbjct: 303 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRA 362

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L  +   + G A  +  T T L+D + K G+  +A  L N M ++    ++  YN +
Sbjct: 363 EMLLSRM--KEQGLA-PNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAI 419

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G C  G +  A+       + G   D +TY  L++  CKQ ++ +A   +  + K+G+
Sbjct: 420 VDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGI 479

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  SY T+I   C    + ++  F    +   +VP    +  +I GY R G+L  A  
Sbjct: 480 QPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALK 539

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
               M   G +S+  T+ ALI    +   + +A  L   M+  G+ P   T   L    C
Sbjct: 540 FFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYC 599

Query: 483 NL 484
            +
Sbjct: 600 KI 601



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 170/379 (44%), Gaps = 45/379 (11%)

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           +  +  +  + +A+ +   M N G+ P+  T N +V  + + GL+               
Sbjct: 139 VKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLV--------------- 183

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
                           Y +N        L+++M  + +Q + V+Y V++ G+C  G++  
Sbjct: 184 ---------------EYAEN--------LFDEMCARGVQPNCVSYRVMVVGYCKLGNVLE 220

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           +  +   M++RGF+ D  T + ++   C++G +  A  ++    + G+ P+ I++  +I+
Sbjct: 221 SDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIE 280

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVS 433
           GLC  G + +A E L  M+ +   P  +    +IDG  + G    AF +   L+ S    
Sbjct: 281 GLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHK 340

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            NV T+ A+I    R   +  A  L   M   G+ P+  TY  LI   C  G+   A +L
Sbjct: 341 PNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYEL 400

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
            + M   G +P++ TY  ++ G C +G ++EA +V       GL  D + + IL      
Sbjct: 401 MNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTIL------ 454

Query: 554 MKESDKARDIHQKWLLRNK 572
           + E  K  +I Q  +L NK
Sbjct: 455 ISEHCKQAEIKQALVLFNK 473



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 146/321 (45%), Gaps = 15/321 (4%)

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           + PN +TH+              AV  +   LA D G   +    +  +  S F++  + 
Sbjct: 69  VDPNSLTHD-------------QAVTIVAS-LASDAGSMVALSFFNWAIASSKFRHFTRL 114

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
                 + +  KN +        ++  F   G +  A     +M  +G  P   T N ++
Sbjct: 115 YIACAASLISNKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVV 174

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             + + G ++ A + +  +   GV P+ +SY+ ++ G C  G+++++  +L  M+E+  V
Sbjct: 175 KIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFV 234

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
            +    ++I+  +   G ++ A          G+  N+  F  +I    + GS+  AF +
Sbjct: 235 VDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEM 294

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR-RGITPDIITYTELIKGHC 517
            +EM+  G  P+V+T+  LI   C  G    A +L+ +++R     P+++TYT +I G+C
Sbjct: 295 LEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYC 354

Query: 518 ARGNMKEAEEVFAKIQTLGLA 538
               M  AE + ++++  GLA
Sbjct: 355 RDEKMNRAEMLLSRMKEQGLA 375



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 40/286 (13%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  M++ G     L  +   +  +I   C  G    A  L   M ++G  P+V T+N +V
Sbjct: 366 LSRMKEQG-----LAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIV 420

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           + LCK G +++A  V++         +  TY   I+ +C+  E+ +AL LF+ M  +GI+
Sbjct: 421 DGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQ 480

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           P+  ++  L+   C++  + ++  F  E  A   G   ++  T T ++  Y + G+   A
Sbjct: 481 PDIHSYTTLIAVFCREKRMKESEMFFEE--AVRFGLVPTNK-TYTSMICGYCREGNLRLA 537

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD---------- 330
           L  ++ M      +D + Y  LI+G C    +  A   +  M+++G  P           
Sbjct: 538 LKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYE 597

Query: 331 ----------------------VITYNTLLNCLCKQGKLDEASHFY 354
                                 V T NTL+  LC + K+  A+ F+
Sbjct: 598 YCKIDDGCSAMVVLERLEKKLWVRTVNTLVRKLCSERKVGMAALFF 643



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/142 (21%), Positives = 65/142 (45%)

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
           +   ++  +   G +  A  +   M + G++ +  T N ++   T  G +  A +L  EM
Sbjct: 134 VMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEM 193

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
              G+ P+  +Y +++   C LG++  + +    M+ RG   D  T + +++  C +G +
Sbjct: 194 CARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFV 253

Query: 523 KEAEEVFAKIQTLGLAIDHIPF 544
             A   F +   +GL  + I F
Sbjct: 254 TRALWYFRRFCEMGLRPNLINF 275



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 5/145 (3%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR  L    + + ++I   C  G +  AL    +M   G   D +T+  L++ LCK   L
Sbjct: 510 VRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKL 569

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN-GIRPNRVTHNI 228
           ++A  +   M E   +P   T       YC++++   A+ +   +     +R    T N 
Sbjct: 570 DEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKKLWVR----TVNT 625

Query: 229 LVHALCKKGLLGDAVKFLGEVLADD 253
           LV  LC +  +G A  F  ++L  D
Sbjct: 626 LVRKLCSERKVGMAALFFHKLLDKD 650


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 178/371 (47%), Gaps = 6/371 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +++  G  P+    N L+ +L ++G+L  A +V  EM          ++N  I+G CR  
Sbjct: 106 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 165

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +LD A  L   M+  G+ P+  T+  L+  LC+ G + DA     ++          + +
Sbjct: 166 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG---MKPNAV 222

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             TIL+D++ K GD    L L  +M ++ ++ D V YN ++NG C   D+ SA     +M
Sbjct: 223 VFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEM 282

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
              G  PD +TY TL++  CK+ +LD A      +   GV  D+++Y  +I GL   G  
Sbjct: 283 RSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRS 342

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A   L  M+E  + P+   + ++ID + R GD+     +   M + G    V T+N +
Sbjct: 343 ADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVI 402

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +    + G + +A  L   M+  G+ PD  TYN+L+   C  G +    +L      +G 
Sbjct: 403 MNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSA---KGT 459

Query: 503 TPDIITYTELI 513
            PD+  YT ++
Sbjct: 460 VPDLGVYTSIV 470



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 173/356 (48%), Gaps = 6/356 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++RDL   G++ +A  +  +M  +G    V++ N +++ +C+ GDL+ A+ + R MSE  
Sbjct: 122 LMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAG 181

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  TY A I G CRV  ++ A  +F  M   G++PN V   IL+ A CKKG   DA 
Sbjct: 182 VTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKG---DAE 238

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L       +     D +T   +++   +  D   A  +  +M    ++ D V Y  LI
Sbjct: 239 TMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLI 298

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+C   ++  A      M+  G   D +TY  L++ L K G+  +A    G + + G+ 
Sbjct: 299 DGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLE 358

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y  +I   C  GD+      L  M  K   P    +NVI++G+ + G + NA  +
Sbjct: 359 PDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADML 418

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
            + M++ GVS +  T+N L+    + G + D   LK      G  PD+  Y  ++G
Sbjct: 419 LNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSA---KGTVPDLGVYTSIVG 471



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 162/362 (44%), Gaps = 38/362 (10%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P    +N  +    R+ EL  A ++F  M + G+R   V+ N ++  +C+ G        
Sbjct: 114 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG-------- 165

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
                 D DG  T                        L   M +  +  D+  Y  LI G
Sbjct: 166 ------DLDGAET------------------------LHRRMSEAGVTPDVYTYGALIQG 195

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C  G I  A   F +M  RG  P+ + +  L++  CK+G  +     +  + + GV PD
Sbjct: 196 LCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPD 255

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++Y  I+ GLC   D+  A   ++ M    + P+   +  +IDGY +  +L  A  I+ 
Sbjct: 256 AVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQ 315

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M++ GV  +  T+ ALI   ++ G   DA  +  EM+  G+ PD  TY ++I A C  G
Sbjct: 316 NMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKG 375

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +   L+L  EM  +G  P ++TY  ++ G C  G MK A+ +   +  +G++ D I + 
Sbjct: 376 DVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYN 435

Query: 546 IL 547
           IL
Sbjct: 436 IL 437



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 143/292 (48%), Gaps = 6/292 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + A+I+ LC  G+I  A  +  KM  +G  P+ +    L++  CK GD E    + 
Sbjct: 185 DVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELH 244

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           REM E    P+  TYNA + G CR  +L  A  +   M + G+RP+ VT+  L+   CK+
Sbjct: 245 REMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKE 304

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             L  A++    ++A+  G    D +T T L+    K G    A  +  +M +  ++ D 
Sbjct: 305 EELDMAMEIKQNMVAEGVG---LDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDN 361

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y ++I+ FC  GD+ +      +M  +G  P V+TYN ++N  CK G++  A      
Sbjct: 362 TTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNA 421

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           +   GV+PD I+Y  ++ G C HG +    E   +   K  VP+  ++  I+
Sbjct: 422 MINIGVSPDDITYNILLDGHCKHGKVTDIEELKSA---KGTVPDLGVYTSIV 470



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 109/220 (49%)

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA  FY  L   G+ P+   +  +++ L   G++  A+     M  + V      +N +I
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
            G  R GDL  A ++   M   GV+ +V+T+ ALI    R G I DA  + ++M   G+ 
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P+   + +LI A C  G     L+L+ EM  RG+ PD +TY  ++ G C   ++K A  +
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             ++++ GL  D + +  L   Y + +E D A +I Q  +
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMV 318



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 8/172 (4%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MR  G     L  D   +  +I   C   ++  A+ +++ M+ +G   D +T+  L++ L
Sbjct: 282 MRSAG-----LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 336

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
            K G    A+ V+ EM E    P+  TY   I  +CR  ++   L L   M N G +P  
Sbjct: 337 SKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGV 396

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           VT+N++++  CK G + +A   L  ++   +   + D IT  IL+D + K+G
Sbjct: 397 VTYNVIMNGFCKLGQMKNADMLLNAMI---NIGVSPDDITYNILLDGHCKHG 445


>gi|242039357|ref|XP_002467073.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
 gi|241920927|gb|EER94071.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
          Length = 808

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 229/458 (50%), Gaps = 6/458 (1%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGT-VPDVLTHNYLVNELCKIGDLEKADH 174
           +DY  H  +I  LC   KIG AL   +++ ++G  +P  +T N L++ LC  G ++ A  
Sbjct: 214 SDYS-HSILIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTFNTLMSALCNWGFIQDAKS 272

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           V   M +   +P+  TY+  I G C++  + +A ++F ++   G+  + VT N L++   
Sbjct: 273 VFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNSLINGFR 332

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G   +  K + E++         D++T TIL+  + + GD  + + +  D+  + ++ 
Sbjct: 333 LHGHTREIPKMI-EMMRGLG--VEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQGMEL 389

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           +IV Y+VLIN     G          ++   G   DVI Y+ L++   K G++  A   +
Sbjct: 390 NIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRALQVW 449

Query: 355 GVL-SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
            ++ S   V P  +++ +I+ GLC  G + +AR +L ++  K    +  ++NV+IDGY +
Sbjct: 450 NLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVIDGYAK 509

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            GD+ NA  + D ++  G+   + T N+L+    + G +  A S    + L  + P   T
Sbjct: 510 VGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDLLPTTVT 569

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  L+ A    G +H  L L+ EM  +GI P+ +TY+ +IKG C +    +A+ V   + 
Sbjct: 570 YTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSVVIKGLCKQFMFHDAKNVLDDMC 629

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
             G   D IP+  L + +   +++  A  +++  + R 
Sbjct: 630 IEGFDADPIPYNTLIQGFCETQDAKNAFGVYELMVFRG 667



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 220/463 (47%), Gaps = 9/463 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E    ++ MR  G     +E D   +  +I   C GG +   + +R+ ++ +G   +++
Sbjct: 338 REIPKMIEMMRGLG-----VEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQGMELNIV 392

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++ L+N L K G   + ++++ E+  +    +   Y+  I GY ++ E+ +AL +++ M
Sbjct: 393 TYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRALQVWNLM 452

Query: 215 -ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
            ++  + P  V H  ++  LCKKG L +A  +L E +A       SDV+   +++D Y K
Sbjct: 453 CSSQRVTPTSVNHVSILLGLCKKGFLDEARSYL-ETIASK--YQPSDVVLYNVVIDGYAK 509

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            GD   A+ L++ +    +   IV  N L+ G+C  GD+  A +YF  +     LP  +T
Sbjct: 510 VGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDLLPTTVT 569

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y TL++ L + GK+      +  ++  G+ P+ ++Y  +I+GLC       A+  L  M 
Sbjct: 570 YTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSVVIKGLCKQFMFHDAKNVLDDMC 629

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            +    +P  +N +I G+    D  NAF + +LM+  GV     T+N L+      G + 
Sbjct: 630 IEGFDADPIPYNTLIQGFCETQDAKNAFGVYELMVFRGVMPTPVTYNLLVNVLCSKGLVI 689

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A    +     G     F Y  LI A C  G  + A+  + ++L  G    I  ++  I
Sbjct: 690 HAEMQLESFRKQGAKLRKFAYITLIKAQCAKGMPYKAIMWFGKLLDAGFEASIEDFSAAI 749

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
              C R   KEA  +   + ++G+  D   +R+L    ++  E
Sbjct: 750 NRLCKRQFTKEALMLVPIMLSVGVYPDVELYRVLGTAVQKKNE 792



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 201/457 (43%), Gaps = 43/457 (9%)

Query: 120 RHV--AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR 177
           RH    +I  LC  G +  A  + + + ++G   D++T N L+N     G   +   +I 
Sbjct: 286 RHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIE 345

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
            M  +   P+  TY   I G+C   ++++ + +   +   G+  N VT+++L++AL KKG
Sbjct: 346 MMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQGMELNIVTYSVLINALFKKG 405

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM---------- 287
           L  +    LGE+ +        DVI  +IL+  Y K G+  +AL +WN M          
Sbjct: 406 LFYEVENLLGEICSVG---LELDVIAYSILIHGYSKLGEIGRALQVWNLMCSSQRVTPTS 462

Query: 288 --------------------------FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
                                       K   +D+V YNV+I+G+   GDI +A   +  
Sbjct: 463 VNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDA 522

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           ++  G  P ++T N+LL   CK G L  A  ++  +  + + P  ++Y T++  L   G 
Sbjct: 523 IIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDLLPTTVTYTTLMDALSEAGK 582

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           +         M  K + P    ++V+I G  +     +A ++ D M   G  ++   +N 
Sbjct: 583 VHSMLSLFKEMTGKGIKPNAVTYSVVIKGLCKQFMFHDAKNVLDDMCIEGFDADPIPYNT 642

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH-IHLALQLYDEMLRR 500
           LI          +AF + + M+  G+ P   TYNLL+   C+ G  IH  +QL +   ++
Sbjct: 643 LIQGFCETQDAKNAFGVYELMVFRGVMPTPVTYNLLVNVLCSKGLVIHAEMQL-ESFRKQ 701

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           G       Y  LIK  CA+G   +A   F K+   G 
Sbjct: 702 GAKLRKFAYITLIKAQCAKGMPYKAIMWFGKLLDAGF 738



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 185/394 (46%), Gaps = 41/394 (10%)

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A +V+ +MS +    +  TY++ +     + + D AL +F  M + GI P+  +H+IL+ 
Sbjct: 167 ALYVLSKMSSLNMQISITTYDSLLYS---LRKADVALEIFKEMESCGIPPSDYSHSILID 223

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            LCK+  +G+A+ FL E+                       +   KF  L +        
Sbjct: 224 GLCKQDKIGEALSFLQEI-----------------------RKEGKFIPLGM-------- 252

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
                  +N L++  C  G I  A + FC MLK G  P   TY+T+++ LCK G + EA 
Sbjct: 253 ------TFNTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAF 306

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
           + +  +++ G+  D ++  ++I G  +HG   +  + +  M    V P+   + ++I G+
Sbjct: 307 NIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGH 366

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
              GD+     IR  +L  G+  N+ T++ LI A  + G  ++  +L  E+   G+  DV
Sbjct: 367 CEGGDVEEGMKIRKDILGQGMELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDV 426

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEML-RRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             Y++LI     LG I  ALQ+++ M   + +TP  + +  ++ G C +G + EA     
Sbjct: 427 IAYSILIHGYSKLGEIGRALQVWNLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLE 486

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
            I +     D + + ++   Y ++ +   A  ++
Sbjct: 487 TIASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLY 520



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 155/324 (47%), Gaps = 4/324 (1%)

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           D+   L ++L     +  S+ I    L +SY +      AL + + M   N+Q  I  Y+
Sbjct: 128 DSAPTLCDILWSGFKEWDSNSIVWDALANSYARAQMNHDALYVLSKMSSLNMQISITTYD 187

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L+       D+  A   F +M   G  P   +++ L++ LCKQ K+ EA  F   + K 
Sbjct: 188 SLLYSL-RKADV--ALEIFKEMESCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEIRKE 244

Query: 361 G-VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
           G   P  +++ T++  LC  G I  A+     ML+  + P  H ++ II G  + G +S 
Sbjct: 245 GKFIPLGMTFNTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSE 304

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AF+I   +   G+  ++ T N+LI      G   +   + + M   G+ PD+ TY +LI 
Sbjct: 305 AFNIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIA 364

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
             C  G +   +++  ++L +G+  +I+TY+ LI     +G   E E +  +I ++GL +
Sbjct: 365 GHCEGGDVEEGMKIRKDILGQGMELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLEL 424

Query: 540 DHIPFRILKKRYRRMKESDKARDI 563
           D I + IL   Y ++ E  +A  +
Sbjct: 425 DVIAYSILIHGYSKLGEIGRALQV 448



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 3/242 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++  L   GK+ + L L ++M  KG  P+ +T++ ++  LCK      A +V+ +M 
Sbjct: 570 YTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSVVIKGLCKQFMFHDAKNVLDDMC 629

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                 +   YN  I G+C   +   A  ++  M   G+ P  VT+N+LV+ LC KGL+ 
Sbjct: 630 IEGFDADPIPYNTLIQGFCETQDAKNAFGVYELMVFRGVMPTPVTYNLLVNVLCSKGLVI 689

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A   L               IT   L+ +    G  ++A+  +  +     +  I  ++
Sbjct: 690 HAEMQLESFRKQGAKLRKFAYIT---LIKAQCAKGMPYKAIMWFGKLLDAGFEASIEDFS 746

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
             IN  C       A      ML  G  PDV  Y  L   + K+ +L        +  KT
Sbjct: 747 AAINRLCKRQFTKEALMLVPIMLSVGVYPDVELYRVLGTAVQKKNELFYLPILQALAIKT 806

Query: 361 GV 362
           G+
Sbjct: 807 GI 808


>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
          Length = 820

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 222/444 (50%), Gaps = 25/444 (5%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G    A+    K    G   D + +N  ++  CK G++ +A  ++ EM     +P+   Y
Sbjct: 378 GMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHY 437

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I+GYC   E+  A  +F  M    I P+ VT+NIL    CK GL+ +    L + +A
Sbjct: 438 TCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLL-DRMA 496

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
           D   +  S  +T  I +  + + G+  +A  L+N + +K I    V Y+ ++ G+ L+G 
Sbjct: 497 DQGLEPNS--LTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGW 554

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A+  F ++ ++G L D  + + L+N LC+ G +  AS+   ++ +  V PD ISY  
Sbjct: 555 TDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSK 614

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I   C +GD+ KA  +   M+++ +  +  ++ ++++GY + G L  A  +   M + G
Sbjct: 615 LISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLG 674

Query: 432 VSSNVFTFNALI--------------LAETRGGSIFDA-----FSLKKEMLLDGIFPDVF 472
           +  +V  +  L+              +A+ R   +  A      S  K+M ++   PDV 
Sbjct: 675 IKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIE---PDVP 731

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            Y +LI   C   ++  A +L+DEML++G+TPD   YT LI G+C++G + +AE++  ++
Sbjct: 732 CYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEM 791

Query: 533 QTLGLAIDHIPFRILKKRYRRMKE 556
              G+  D + F +L +   R ++
Sbjct: 792 IDKGIEPDELTFSVLNQSSLRSRK 815



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 213/501 (42%), Gaps = 64/501 (12%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC   ++  A  L     ++G+ PDV  ++YL+   CK+G+L  A      M    
Sbjct: 300 VMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHG 359

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              NC   +  +  + ++    +A+  F    ++G+  ++V +NI +   CK G + +AV
Sbjct: 360 IETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAV 419

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L E+     G  T D I  T L+  Y   G+   A  ++ +M + NI+ DIV YN+L 
Sbjct: 420 KLLNEM---KYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILA 476

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GFC +G +   F    +M  +G  P+ +TY   +   C+ G L EA   + V+ + G+ 
Sbjct: 477 SGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGID 536

Query: 364 PDQISYKTIIQG-----------------------------------LCIHGDIVKAREF 388
             ++ Y +++ G                                   LC  G++  A   
Sbjct: 537 HIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNV 596

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              MLE  VVP+   ++ +I  Y + GD+  A      M+  G+S +V  +  L+    +
Sbjct: 597 CKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCK 656

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ---------------- 492
            G + +A  L  +M   GI PDV  Y +L+      GH+   LQ                
Sbjct: 657 AGRLQEACQLFVQMTNLGIKPDVIAYTVLLD-----GHLKETLQQGWEGIAKERRSFLLR 711

Query: 493 -----LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
                L   M    I PD+  YT LI G C    + EA E+F ++   GL  D   +  L
Sbjct: 712 ANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTAL 771

Query: 548 KKRYRRMKESDKARDIHQKWL 568
              Y    E  KA D+ Q+ +
Sbjct: 772 INGYCSQGEISKAEDLLQEMI 792



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 204/438 (46%), Gaps = 3/438 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D      V R L    K+  AL +  +M + G  PD   ++  +  LC  G  + A 
Sbjct: 220 LTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAY 279

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +++E++  +       YN  + G C+   LD+A  L    A  G  P+   ++ L+ + 
Sbjct: 280 VILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSY 339

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G L +AV     +++   G  T+  I S  L+  + K G   +A+A +       + 
Sbjct: 340 CKMGNLINAVDHYEAMVSH--GIETNCHIVS-YLLQCFRKLGMTSEAIAYFLKFKDSGLH 396

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D V YN+ ++ +C NG+++ A     +M   G  PD I Y  L++  C +G++  A   
Sbjct: 397 LDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQV 456

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  + K  + PD ++Y  +  G C  G +++  + L  M ++ + P    + + I G+ R
Sbjct: 457 FEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCR 516

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G+LS A  + +++   G+      +++++      G    A+ L   +   G   D F+
Sbjct: 517 GGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFS 576

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            + LI   C +G++  A  +   ML   + PD+I+Y++LI  +C  G+M +A   F  + 
Sbjct: 577 CSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMV 636

Query: 534 TLGLAIDHIPFRILKKRY 551
             GL++D I + IL   Y
Sbjct: 637 QRGLSVDVIVYTILMNGY 654



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 176/410 (42%), Gaps = 59/410 (14%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E +  L  M+  G     L  D   +  +I   CL G++  A  +  +M++    PD+
Sbjct: 415 MNEAVKLLNEMKYGG-----LTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDI 469

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N L +  CK G + +   ++  M++    PN  TY   I G+CR   L +A  LF+ 
Sbjct: 470 VTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNV 529

Query: 214 MANNGI--------------------------------RPNRVTH---NILVHALCKKGL 238
           +   GI                                + N V H   + L++ LC+ G 
Sbjct: 530 VEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGN 589

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           +  A      +L  D      DVI+ + L+  Y +NGD  +A   ++DM Q+ +  D++ 
Sbjct: 590 VQGASNVCKIMLEHD---VVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIV 646

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ-------GKLDEAS 351
           Y +L+NG+C  G +  A   F QM   G  PDVI Y  LL+   K+       G   E  
Sbjct: 647 YTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERR 706

Query: 352 HFY---------GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
            F            +    + PD   Y  +I G C    +V+ARE    ML+K + P+ +
Sbjct: 707 SFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAY 766

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
            +  +I+GY   G++S A  +   M+  G+  +  TF+ L  +  R   I
Sbjct: 767 AYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKI 816



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 164/355 (46%), Gaps = 9/355 (2%)

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
           A IT Y    ++   + LFS +   G+ P+  T N+L+  + + G     +    E+   
Sbjct: 163 ACITCY----DVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKC- 217

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
              + T DV T  I+  S F+     +AL +W +M +  ++ D   Y+  + G C  G  
Sbjct: 218 --FQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKY 275

Query: 313 SSAFAYFCQMLKRGFLP-DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
             A+    Q + R  +P + + YN +++ LCK+ +LDEA       ++ G  PD   Y  
Sbjct: 276 DLAYVIL-QEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSY 334

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I+  C  G+++ A +   +M+   +    HI + ++  + + G  S A +        G
Sbjct: 335 LIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSG 394

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  +   +N  +    + G++ +A  L  EM   G+ PD   Y  LI   C  G +  A 
Sbjct: 395 LHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQ 454

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           Q+++EML+  I PDI+TY  L  G C  G + E  ++  ++   GL  + + + I
Sbjct: 455 QVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGI 509



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 140/291 (48%)

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           V T  +L+    + G+    LA +N+M    +  D+  + ++         +  A   + 
Sbjct: 189 VWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWA 248

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +M + G  PD   Y++ L  LC  GK D A      +++  V  + ++Y  ++ GLC   
Sbjct: 249 EMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEM 308

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            + +A + L +   +   P+ + ++ +I  Y + G+L NA    + M+S G+ +N    +
Sbjct: 309 RLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVS 368

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            L+    + G   +A +   +    G+  D   YN+ +   C  G+++ A++L +EM   
Sbjct: 369 YLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYG 428

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           G+TPD I YT LI G+C +G M+ A++VF ++    +  D + + IL   +
Sbjct: 429 GLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGF 479



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 129/291 (44%)

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           + L++ + +  +   +  +N+L+      G+     A + +M      PDV T+  +   
Sbjct: 174 ICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRS 233

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           L +  K+DEA   +  +++ GV PD   Y + + GLC  G    A   L  +  + V  E
Sbjct: 234 LFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVE 293

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +N+++DG  +   L  A  + +     G + +V+ ++ LI +  + G++ +A    +
Sbjct: 294 AMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYE 353

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            M+  GI  +    + L+     LG    A+  + +    G+  D + Y   +  +C  G
Sbjct: 354 AMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNG 413

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           NM EA ++  +++  GL  D I +  L   Y    E   A+ + ++ L  N
Sbjct: 414 NMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKAN 464



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 115/280 (41%), Gaps = 22/280 (7%)

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL--CKQGKLDEASHFYGVLS------ 358
           CL    + AFAYF      GF  D  TY+ ++  L   +QGK+   S F  ++S      
Sbjct: 75  CLKRRPAIAFAYFKDTQSIGFNHDFSTYSEMIQILSHSRQGKM-LVSLFSELVSSSNASG 133

Query: 359 -----------KTGVAPDQISYKT-IIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWN 405
                      +T   P  +S+    +   CI    V+A   L S + +  VVP    WN
Sbjct: 134 PEILPLVDHHRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGICRLGVVPSVWTWN 193

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
           +++      G+     +  + M  F ++ +V+TF  +  +  +   + +A  +  EM   
Sbjct: 194 LLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEM 253

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G+ PD   Y+  +   C+ G   LA  +  E+ R  +  + + Y  ++ G C    + EA
Sbjct: 254 GVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEA 313

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           E++       G   D   +  L + Y +M     A D ++
Sbjct: 314 EKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYE 353


>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
          Length = 938

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 222/444 (50%), Gaps = 25/444 (5%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G    A+    K    G   D + +N  ++  CK G++ +A  ++ EM     +P+   Y
Sbjct: 496 GMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHY 555

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I+GYC   E+  A  +F  M    I P+ VT+NIL    CK GL+ +    L + +A
Sbjct: 556 TCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLL-DRMA 614

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
           D   +  S  +T  I +  + + G+  +A  L+N + +K I    V Y+ ++ G+ L+G 
Sbjct: 615 DQGLEPNS--LTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGW 672

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A+  F ++ ++G L D  + + L+N LC+ G +  AS+   ++ +  V PD ISY  
Sbjct: 673 TDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSK 732

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I   C +GD+ KA  +   M+++ +  +  ++ ++++GY + G L  A  +   M + G
Sbjct: 733 LISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLG 792

Query: 432 VSSNVFTFNALI--------------LAETRGGSIFDA-----FSLKKEMLLDGIFPDVF 472
           +  +V  +  L+              +A+ R   +  A      S  K+M ++   PDV 
Sbjct: 793 IKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIE---PDVP 849

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            Y +LI   C   ++  A +L+DEML++G+TPD   YT LI G+C++G + +AE++  ++
Sbjct: 850 CYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEM 909

Query: 533 QTLGLAIDHIPFRILKKRYRRMKE 556
              G+  D + F +L +   R ++
Sbjct: 910 IDKGIEPDELTFSVLNQSSLRSRK 933



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 213/501 (42%), Gaps = 64/501 (12%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC   ++  A  L     ++G+ PDV  ++YL+   CK+G+L  A      M    
Sbjct: 418 VMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHG 477

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              NC   +  +  + ++    +A+  F    ++G+  ++V +NI +   CK G + +AV
Sbjct: 478 IETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAV 537

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L E+     G  T D I  T L+  Y   G+   A  ++ +M + NI+ DIV YN+L 
Sbjct: 538 KLLNEM---KYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILA 594

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GFC +G +   F    +M  +G  P+ +TY   +   C+ G L EA   + V+ + G+ 
Sbjct: 595 SGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGID 654

Query: 364 PDQISYKTIIQG-----------------------------------LCIHGDIVKAREF 388
             ++ Y +++ G                                   LC  G++  A   
Sbjct: 655 HIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNV 714

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              MLE  VVP+   ++ +I  Y + GD+  A      M+  G+S +V  +  L+    +
Sbjct: 715 CKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCK 774

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ---------------- 492
            G + +A  L  +M   GI PDV  Y +L+      GH+   LQ                
Sbjct: 775 AGRLQEACQLFVQMTNLGIKPDVIAYTVLLD-----GHLKETLQQGWEGIAKERRSFLLR 829

Query: 493 -----LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
                L   M    I PD+  YT LI G C    + EA E+F ++   GL  D   +  L
Sbjct: 830 ANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTAL 889

Query: 548 KKRYRRMKESDKARDIHQKWL 568
              Y    E  KA D+ Q+ +
Sbjct: 890 INGYCSQGEISKAEDLLQEMI 910



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 204/438 (46%), Gaps = 3/438 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D      V R L    K+  AL +  +M + G  PD   ++  +  LC  G  + A 
Sbjct: 338 LTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAY 397

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +++E++  +       YN  + G C+   LD+A  L    A  G  P+   ++ L+ + 
Sbjct: 398 VILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSY 457

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G L +AV     +++   G  T+  I S  L+  + K G   +A+A +       + 
Sbjct: 458 CKMGNLINAVDHYEAMVSH--GIETNCHIVS-YLLQCFRKLGMTSEAIAYFLKFKDSGLH 514

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D V YN+ ++ +C NG+++ A     +M   G  PD I Y  L++  C +G++  A   
Sbjct: 515 LDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQV 574

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  + K  + PD ++Y  +  G C  G +++  + L  M ++ + P    + + I G+ R
Sbjct: 575 FEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCR 634

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G+LS A  + +++   G+      +++++      G    A+ L   +   G   D F+
Sbjct: 635 GGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFS 694

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            + LI   C +G++  A  +   ML   + PD+I+Y++LI  +C  G+M +A   F  + 
Sbjct: 695 CSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMV 754

Query: 534 TLGLAIDHIPFRILKKRY 551
             GL++D I + IL   Y
Sbjct: 755 QRGLSVDVIVYTILMNGY 772



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 176/410 (42%), Gaps = 59/410 (14%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E +  L  M+  G     L  D   +  +I   CL G++  A  +  +M++    PD+
Sbjct: 533 MNEAVKLLNEMKYGG-----LTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDI 587

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N L +  CK G + +   ++  M++    PN  TY   I G+CR   L +A  LF+ 
Sbjct: 588 VTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNV 647

Query: 214 MANNGI--------------------------------RPNRVTH---NILVHALCKKGL 238
           +   GI                                + N V H   + L++ LC+ G 
Sbjct: 648 VEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGN 707

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           +  A      +L  D      DVI+ + L+  Y +NGD  +A   ++DM Q+ +  D++ 
Sbjct: 708 VQGASNVCKIMLEHD---VVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIV 764

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ-------GKLDEAS 351
           Y +L+NG+C  G +  A   F QM   G  PDVI Y  LL+   K+       G   E  
Sbjct: 765 YTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERR 824

Query: 352 HFY---------GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
            F            +    + PD   Y  +I G C    +V+ARE    ML+K + P+ +
Sbjct: 825 SFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAY 884

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
            +  +I+GY   G++S A  +   M+  G+  +  TF+ L  +  R   I
Sbjct: 885 AYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKI 934



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 162/354 (45%), Gaps = 7/354 (1%)

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
           A IT Y    ++   + LFS +   G+ P+  T N+L+  + + G     +    E+   
Sbjct: 281 ACITCY----DVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKC- 335

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
              + T DV T  I+  S F+     +AL +W +M +  ++ D   Y+  + G C  G  
Sbjct: 336 --FQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKY 393

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A+    ++ +     + + YN +++ LCK+ +LDEA       ++ G  PD   Y  +
Sbjct: 394 DLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYL 453

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I+  C  G+++ A +   +M+   +    HI + ++  + + G  S A +        G+
Sbjct: 454 IRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGL 513

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +   +N  +    + G++ +A  L  EM   G+ PD   Y  LI   C  G +  A Q
Sbjct: 514 HLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQ 573

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +++EML+  I PDI+TY  L  G C  G + E  ++  ++   GL  + + + I
Sbjct: 574 VFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGI 627



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 140/291 (48%)

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           V T  +L+    + G+    LA +N+M    +  D+  + ++         +  A   + 
Sbjct: 307 VWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWA 366

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +M + G  PD   Y++ L  LC  GK D A      +++  V  + ++Y  ++ GLC   
Sbjct: 367 EMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEM 426

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            + +A + L +   +   P+ + ++ +I  Y + G+L NA    + M+S G+ +N    +
Sbjct: 427 RLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVS 486

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            L+    + G   +A +   +    G+  D   YN+ +   C  G+++ A++L +EM   
Sbjct: 487 YLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYG 546

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           G+TPD I YT LI G+C +G M+ A++VF ++    +  D + + IL   +
Sbjct: 547 GLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGF 597



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 129/291 (44%)

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           + L++ + +  +   +  +N+L+      G+     A + +M      PDV T+  +   
Sbjct: 292 ICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRS 351

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           L +  K+DEA   +  +++ GV PD   Y + + GLC  G    A   L  +  + V  E
Sbjct: 352 LFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVE 411

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +N+++DG  +   L  A  + +     G + +V+ ++ LI +  + G++ +A    +
Sbjct: 412 AMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYE 471

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            M+  GI  +    + L+     LG    A+  + +    G+  D + Y   +  +C  G
Sbjct: 472 AMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNG 531

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           NM EA ++  +++  GL  D I +  L   Y    E   A+ + ++ L  N
Sbjct: 532 NMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKAN 582



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 111/269 (41%), Gaps = 22/269 (8%)

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL--CKQGKLDEASHFYGVLS------ 358
           CL    + AFAYF      GF  D  TY+ ++  L   +QGK+   S F  ++S      
Sbjct: 193 CLKRRPAIAFAYFKDTQSIGFNHDFSTYSEMIQILSHSRQGKM-LVSLFSELVSSSNASG 251

Query: 359 -----------KTGVAPDQISYKT-IIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWN 405
                      +T   P  +S+    +   CI    V+A   L S + +  VVP    WN
Sbjct: 252 PEILPLVDHHRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGICRLGVVPSVWTWN 311

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
           +++      G+     +  + M  F ++ +V+TF  +  +  +   + +A  +  EM   
Sbjct: 312 LLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEM 371

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G+ PD   Y+  +   C+ G   LA  +  E+ R  +  + + Y  ++ G C    + EA
Sbjct: 372 GVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEA 431

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           E++       G   D   +  L + Y +M
Sbjct: 432 EKLLENKARQGSNPDVYGYSYLIRSYCKM 460


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 199/417 (47%), Gaps = 4/417 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++R LC GG +  A      +++K    D  T N L+  +CK G L++A  +  +M   
Sbjct: 569 SLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTR 628

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TY   + G+C+  ++  AL L   M   G+ P+ + +  L++ L  +G +  A
Sbjct: 629 NILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAA 688

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E++  +   A  D I    +M+ Y K G   +   L  +M +  +     +YN+L
Sbjct: 689 SYMFQEIICKEGLYA--DCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNIL 746

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG--VLSKT 360
           ++G+   G +S     +  M+K G  PD +TY  L+  LC+ G ++ A  F    VL ++
Sbjct: 747 MHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEES 806

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P    Y  +I   C  GDI  A E    M    VVP     + I+ G  +CG +  A
Sbjct: 807 GLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEA 866

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +   ++  G+   + TF  L+    +   I DAF LK+ M   G+  DV TYN+LI  
Sbjct: 867 IIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITG 926

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            CN   I  AL LY+EM  +G+ P+I TY  L     A G M++ E++   I+  G+
Sbjct: 927 LCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGI 983



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 208/458 (45%), Gaps = 41/458 (8%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
            C  G    AL     + + G V + + HN L+    + G + +A+   + MS M+ S +
Sbjct: 469 FCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFD 528

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
            A++N  I  YC+   + +A  ++  M  +G  P+  T+  L+  LC+ G L  A +F+ 
Sbjct: 529 VASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMV 588

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
            +L   +     D  T   L+    K+G   +AL L   M  +NI  D   Y +L++GFC
Sbjct: 589 YLL---EKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFC 645

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH-FYGVLSKTGVAPDQ 366
             G I  A      ML++G +PD I Y  LLN L  +G++  AS+ F  ++ K G+  D 
Sbjct: 646 KRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADC 705

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           I+Y +++ G    G I +    + +M E  V P    +N+++ GY + G LS    +   
Sbjct: 706 IAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRD 765

Query: 427 MLSFGVSSNVFTFN-------------------------------------ALILAETRG 449
           M+  G+  +  T+                                      ALI A+ R 
Sbjct: 766 MVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRV 825

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G I  AF LK++M   G+ P     + ++   C  G +  A+ ++  ++R G+ P I T+
Sbjct: 826 GDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATF 885

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           T L+ G C    + +A  +   +++ GL +D + + +L
Sbjct: 886 TTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVL 923



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 202/486 (41%), Gaps = 95/486 (19%)

Query: 138 LWLRRKMIQKGTVP-DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           +WL  K       P DV T N ++N LC  G L KA+ ++++M   R  PN  TYN  + 
Sbjct: 214 VWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCR-LPNAVTYNTILN 272

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            Y +      AL +   M  NGI  +  T+NI++  LCK      A   L  +    +  
Sbjct: 273 WYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRM---REVN 329

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG------ 310
            T D  +   L+  +F  G    A+ ++N M +++++  +  Y  LI+G+C NG      
Sbjct: 330 LTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEAR 389

Query: 311 --------------DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
                         ++S A      ML  G  PDVITY+ L+N +CK G + E       
Sbjct: 390 RVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSR 449

Query: 357 LSKTGVAPDQISYKTIIQGLC-------------------------IH----------GD 381
           + K+GV P+ + Y T++   C                         IH          G 
Sbjct: 450 MQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGM 509

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           I +A +F   M    +  +   +N IID Y + G++  AFS+ D M+  G   ++ T+ +
Sbjct: 510 IAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGS 569

Query: 442 LILAETRGGSIF-----------------------------------DAFSLKKEMLLDG 466
           L+    +GG +                                    +A  L ++M+   
Sbjct: 570 LLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRN 629

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           I PD +TY +L+   C  G I  AL L   ML +G+ PD I YT L+ G    G +K A 
Sbjct: 630 ILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAAS 689

Query: 527 EVFAKI 532
            +F +I
Sbjct: 690 YMFQEI 695



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 195/416 (46%), Gaps = 18/416 (4%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+  +AL +   M + G   D+ T+N ++++LCK+    +A  +++ M E+  +P+  +Y
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I G+    +++ A+++F+ M    ++P+  T+  L+   C+ G   +A + L E+  
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEM-- 395

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                     IT         +  +  +A  +   M    I  D++ Y+ LING C  G 
Sbjct: 396 ---------QITGV-------RPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGM 439

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           I        +M K G LP+ + Y TL+   CK G   EA  ++  + ++G+  + + +  
Sbjct: 440 IHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNA 499

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++      G I +A +F   M    +  +   +N IID Y + G++  AFS+ D M+  G
Sbjct: 500 LLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHG 559

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              ++ T+ +L+    +GG +  A      +L      D  T N L+   C  G +  AL
Sbjct: 560 WPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEAL 619

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            L ++M+ R I PD  TYT L+ G C RG +  A  +   +   GL  D I +  L
Sbjct: 620 DLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCL 675



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 152/319 (47%), Gaps = 37/319 (11%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH----NYLVNE---------- 162
           D   +  ++   C  GKI  AL L + M++KG VPD + +    N LVNE          
Sbjct: 633 DTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMF 692

Query: 163 ---LCKI-------------------GDLEKADHVIREMSEMRPSPNCATYNAFITGYCR 200
              +CK                    G + + + ++R M E    P+ A+YN  + GY +
Sbjct: 693 QEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIK 752

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
             +L + L+L+  M   GI+P+ VT+ +L+  LC+ GL+  AVKFL +++ ++ G     
Sbjct: 753 KGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKH 812

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
                 L+++  + GD   A  L  DM    +    VA + ++ G C  G +  A   F 
Sbjct: 813 T-HYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFS 871

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            +++ G +P + T+ TL++ LCK+ K+D+A H   ++   G+  D ++Y  +I GLC   
Sbjct: 872 SIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKK 931

Query: 381 DIVKAREFLLSMLEKSVVP 399
            I  A +    M  K ++P
Sbjct: 932 CICDALDLYEEMKSKGLLP 950



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 137/338 (40%), Gaps = 54/338 (15%)

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           +++ +  +L+++Y K G    A A    M +   +  + + N ++N           + +
Sbjct: 158 TNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLF 217

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF--------------YGV-------- 356
             + L R F  DV T N +LN LC QGKL +A                 Y          
Sbjct: 218 LKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYVKK 277

Query: 357 ------------LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
                       + K G+  D  +Y  +I  LC      +A   L  M E ++ P+   +
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG-------------- 450
           N +I G+   G ++ A  I + ML   +  +V T+ ALI    R G              
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI 397

Query: 451 ------SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
                  +  A  + K ML DGI PDV TY+ LI   C +G IH   ++   M + G+ P
Sbjct: 398 TGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLP 457

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           + + YT L+   C  G+ KEA + F  I   GL  + +
Sbjct: 458 NNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSV 495



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 68/136 (50%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+  +  ++A+I   C  G I  A  L+  M   G VP  +  + +V  LCK G +E+A 
Sbjct: 808 LQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAI 867

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V   +      P  AT+   + G C+  ++D A HL   M + G++ + VT+N+L+  L
Sbjct: 868 IVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGL 927

Query: 234 CKKGLLGDAVKFLGEV 249
           C K  + DA+    E+
Sbjct: 928 CNKKCICDALDLYEEM 943



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 36/260 (13%)

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           S+ F+   + + R    ++ + + L+N   K+GK+ +A+     + + G      S   I
Sbjct: 142 SAIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNI 201

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           +  L           FL   L++    +    N++++     G LS A S+   M +  +
Sbjct: 202 LNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL 261

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL-------- 484
             N  T+N ++    + G    A  +  +M  +GI  D++TYN++I   C L        
Sbjct: 262 P-NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYL 320

Query: 485 ---------------------------GHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
                                      G I+LA+ ++++MLR+ + P + TYT LI G+C
Sbjct: 321 LLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYC 380

Query: 518 ARGNMKEAEEVFAKIQTLGL 537
             G   EA  V  ++Q  G+
Sbjct: 381 RNGRTDEARRVLYEMQITGV 400


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 200/417 (47%), Gaps = 13/417 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKM--------IQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
           +I  +C   ++  AL +  KM        I     PDV+ +N L++ LCK+G  ++   +
Sbjct: 346 LINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGL 405

Query: 176 IREM-SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  M S+   +P+  TYN  I G+C+  E++K   LF  M   G+ PN VT N LV  +C
Sbjct: 406 MERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMC 465

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           + G +  AV F  E  A   G    D +T T L++++    +  +A+ L+N+M +     
Sbjct: 466 RTGRVSSAVNFFVE--AQRRG-MKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSP 522

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D + Y  LI+GF   G ++ A     ++ K G  PD + YNTL+   C+  K        
Sbjct: 523 DAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEML 582

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + + G+ PD I+Y T+I     +GD+  A++ +  M++  VVP    +  +I+ Y   
Sbjct: 583 KEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLN 642

Query: 415 GDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
           G+ + A  I +D+  +  V  N   +N LI +  +   +  A SL ++M + G+ P+  T
Sbjct: 643 GNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTT 702

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           YN +     +   +    +  D M+     PD IT   L +   A G ++  ++  A
Sbjct: 703 YNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVA 759



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 210/446 (47%), Gaps = 13/446 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   K      L  +MI+ G V +    N L+  L + G+  + + ++ +M EM 
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANN--------GIRPNRVTHNILVHALCK 235
             PN  T+   I   C+   +D AL +   M+           + P+ V +N L+  LCK
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G   + +  + E +    G A  D IT   L+D + K G+  +   L+++M ++ +  +
Sbjct: 396 VGRQQEGLGLM-ERMRSQKGCA-PDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPN 453

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           +V  N L+ G C  G +SSA  +F +  +RG   D +TY  L+N  C     ++A   + 
Sbjct: 454 VVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFN 513

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPHIWNVIIDGYGRC 414
            + K+G +PD I Y T+I G    G +  A  F+L+ L+K  + P+   +N +I G+ R 
Sbjct: 514 EMLKSGCSPDAIVYYTLISGFSQAGRMADA-SFVLAELKKLGIRPDTVCYNTLIGGFCRT 572

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
                 F +   M   G+  +  T+N LI   ++ G +  A  + ++M+  G+ P V TY
Sbjct: 573 NKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATY 632

Query: 475 NLLIGASCNLGHIHLALQLYDEM-LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
             +I A C  G+ + A++++ +M     + P+ + Y  LI   C    +K A  +   ++
Sbjct: 633 GAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMK 692

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDK 559
             G+  +   +  + K  R  K+ +K
Sbjct: 693 IWGVTPNTTTYNAIFKGLRDEKDLEK 718



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 132/280 (47%), Gaps = 4/280 (1%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  ++ D   + A+I   C       A+ L  +M++ G  PD + +  L++   + G + 
Sbjct: 482 RRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMA 541

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A  V+ E+ ++   P+   YN  I G+CR N+  +   +   M   G++P+ +T+N L+
Sbjct: 542 DASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLI 601

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM-FQ 289
               K G L  A K + +++          V T   ++++Y  NG+  +A+ ++ DM   
Sbjct: 602 AYASKNGDLKFAQKVMRKMI---KAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAA 658

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             +  + V YN+LIN  C N  + SA +    M   G  P+  TYN +   L  +  L++
Sbjct: 659 SKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEK 718

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
              F   + +    PD I+ + + + L   G+I + ++F+
Sbjct: 719 VFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFV 758



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/365 (21%), Positives = 147/365 (40%), Gaps = 55/365 (15%)

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVL-ADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           N    N+ +  L + G + DA+K + E+  ++DD     +  T  IL  S+    ++ + 
Sbjct: 189 NTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILF-SFLLKRERNEE 247

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGF---------CLNGDISSAFAYFCQMLKRGFLPDV 331
           L   +++   N+      + VLI+ F         C N   +  +  F +M+K G + + 
Sbjct: 248 LLSEDEIV--NLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLES 305

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
              N+LL  L ++G  +  +     + +  + P+ +++  +I  +C    +  A E L  
Sbjct: 306 AACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEK 365

Query: 392 M--------LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           M        +  SV P+  I+N +IDG  + G       + + M S              
Sbjct: 366 MSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRS-------------- 411

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                                 G  PD  TYN LI   C  G I    +L+DEM + G+ 
Sbjct: 412 --------------------QKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVA 451

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P+++T   L+ G C  G +  A   F + Q  G+  D + +  L   +  +   +KA ++
Sbjct: 452 PNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMEL 511

Query: 564 HQKWL 568
             + L
Sbjct: 512 FNEML 516


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 215/448 (47%), Gaps = 38/448 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I+ LCL G I  AL    K++ +G   D +++  L+N LCK+G +  A  +++ +   
Sbjct: 145 TLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGK 204

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   YN  I   C+   ++ A  L+S M    I P+  T N L++  C  G L +A
Sbjct: 205 LVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEA 264

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V  L +++ ++       + T +IL+D++ K G   +A  +     +K+I  D+V YN L
Sbjct: 265 VGLLHKMILEN---INPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSL 321

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+CL  +I+ A   F  M  RG + +V +Y T++N LCK   +DEA + +  +    +
Sbjct: 322 MDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKI 381

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ ++Y                                   N +IDG G+ G +S    
Sbjct: 382 IPNVVTY-----------------------------------NSLIDGLGKLGKISCVLK 406

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M   G   N+ T+N+++ A  +   +  A +L   +   GI PD++TY +LI   C
Sbjct: 407 LVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLC 466

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +  A ++++++L +G   D+ TYT +I+G C +G    A  + +K++  G   +  
Sbjct: 467 QSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAK 526

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLR 570
            + I+        E+D A  + ++ + R
Sbjct: 527 TYEIVILSLFEKDENDMAEKLLREMIAR 554



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 203/413 (49%), Gaps = 5/413 (1%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           TAL L ++M   G V D  T N L+N   ++G    +  V  ++ +    PN  T+N  I
Sbjct: 88  TALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLI 147

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C    + +AL+    +   G   ++V++  L++ LCK G +  A++ L  V    DG
Sbjct: 148 KGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRV----DG 203

Query: 256 K-ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           K    + +   +++D+  K      A  L++ M  K I  D    N LI GFC+ G +  
Sbjct: 204 KLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKE 263

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A     +M+     P + T++ L++  CK+GK+ EA    GV  K  +  D ++Y +++ 
Sbjct: 264 AVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMD 323

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C+  +I KA++   SM  + V+     +  +I+G  +   +  A ++ + M    +  
Sbjct: 324 GYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIP 383

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           NV T+N+LI    + G I     L  EM   G  P++ TYN ++ A C   H+  A+ L 
Sbjct: 384 NVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALL 443

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             +  +GI PD+ TYT LIKG C  G +++A++VF  +   G  +D   + ++
Sbjct: 444 TNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVM 496



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 167/313 (53%)

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
           T  +I    ++ S  K      AL+L   M    I +D   +N+LIN F   G  S +F+
Sbjct: 67  TPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFS 126

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            F ++LK+GF P+ IT+NTL+  LC +G + +A +F+  +   G   DQ+SY T+I GLC
Sbjct: 127 VFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLC 186

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G I  A + L  +  K V P   ++N+IID   +   +++AF +   M++  +S + F
Sbjct: 187 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDF 246

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T N+LI      G + +A  L  +M+L+ I P ++T+++L+ A C  G +  A  +    
Sbjct: 247 TCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVT 306

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
           +++ I  D++TY  L+ G+C    + +A+++F  + + G+  +   +  +     ++K  
Sbjct: 307 MKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMV 366

Query: 558 DKARDIHQKWLLR 570
           D+A ++ ++   R
Sbjct: 367 DEAVNLFEEMRCR 379



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 189/426 (44%), Gaps = 46/426 (10%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P+P    +N  ++   +      AL L   M  NGI  +  T NIL++   + GL   + 
Sbjct: 66  PTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSF 125

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
              G++L         + IT   L+      G   QAL   + +  +    D V+Y  LI
Sbjct: 126 SVFGKILKKG---FDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLI 182

Query: 304 NGFCLNGDISSAFAYFCQMLKR--GFL--PDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           NG C  G I++A     Q+LKR  G L  P+ + YN +++ +CK   +++A   Y  +  
Sbjct: 183 NGLCKVGRITAAL----QLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVA 238

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH----------------- 402
             ++PD  +  ++I G CI G + +A   L  M+ +++ P  +                 
Sbjct: 239 KRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKE 298

Query: 403 ------------------IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
                              +N ++DGY    +++ A  I D M S GV +NV ++  +I 
Sbjct: 299 AKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMIN 358

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              +   + +A +L +EM    I P+V TYN LI     LG I   L+L DEM  RG  P
Sbjct: 359 GLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPP 418

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
           +IITY  ++   C   ++ +A  +   ++  G+  D   + +L K   +  + + A+ + 
Sbjct: 419 NIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVF 478

Query: 565 QKWLLR 570
           +  L++
Sbjct: 479 EDLLVK 484



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 135/277 (48%), Gaps = 3/277 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C  GK+  A  +    ++K  + DV+T+N L++  C + ++ KA  +   M+   
Sbjct: 286 LVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRG 345

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  +Y   I G C++  +D+A++LF  M    I PN VT+N L+  L K G +   +
Sbjct: 346 VIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVL 405

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K + E+    D     ++IT   ++D+  KN    +A+AL  ++  + I+ D+  Y VLI
Sbjct: 406 KLVDEM---HDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLI 462

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C +G +  A   F  +L +G+  DV TY  ++   C +G  D A      +   G  
Sbjct: 463 KGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCI 522

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           P+  +Y+ +I  L    +   A + L  M+ + ++ E
Sbjct: 523 PNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDE 559



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 133/277 (48%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           +  KN    I+ +N +++        S+A +   QM   G + D  T+N L+NC  + G 
Sbjct: 61  LHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGL 120

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
              +   +G + K G  P+ I++ T+I+GLC+ G I +A  F   ++ +    +   +  
Sbjct: 121 NSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGT 180

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +I+G  + G ++ A  +   +    V  N   +N +I    +   + DAF L  +M+   
Sbjct: 181 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 240

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           I PD FT N LI   C +G +  A+ L  +M+   I P + T++ L+   C  G +KEA+
Sbjct: 241 ISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAK 300

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            +        + +D + +  L   Y  +KE +KA+DI
Sbjct: 301 MMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDI 337



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 55/285 (19%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L + +++ K + D+   R  +  + + +  +I  LC    +  A+ L  +M  +  +P+V
Sbjct: 327 LVKEINKAKDIFDSMASRGVI-ANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNV 385

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N L++ L K+G +     ++ EM +    PN  TYN+ +   C+ + +DKA+ L + 
Sbjct: 386 VTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTN 445

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           + + GIRP+  T+ +L+  LC+ G L DA K                             
Sbjct: 446 LKDQGIRPDMYTYTVLIKGLCQSGKLEDAQK----------------------------- 476

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                    ++ D+  K    D+  Y V+I GFC+ G   +A A   +M   G +P+  T
Sbjct: 477 ---------VFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKT 527

Query: 334 YNT----------------LLNCLCKQGKLDEASHFYGVLSKTGV 362
           Y                  LL  +  +G LDE S+ Y    +TGV
Sbjct: 528 YEIVILSLFEKDENDMAEKLLREMIARGLLDEKSYIYLASKETGV 572



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 92/221 (41%)

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
           S F  +L      P  I +  I+  L        A      M    +V +   +N++I+ 
Sbjct: 55  SSFNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINC 114

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           + + G  S +FS+   +L  G   N  TFN LI      G I  A +   +++  G   D
Sbjct: 115 FSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLD 174

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             +Y  LI   C +G I  ALQL   +  + + P+ + Y  +I   C    + +A ++++
Sbjct: 175 QVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYS 234

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           ++    ++ D      L   +  M +  +A  +  K +L N
Sbjct: 235 QMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILEN 275


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 208/429 (48%), Gaps = 10/429 (2%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L R+M   G   +++T + L+N   ++G    +  V   + +    P+  T    I G C
Sbjct: 91  LHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLC 150

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
              ++ KALH    +   G + N+V++  L++ LCK G    A++ L  +    DGK   
Sbjct: 151 LKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRI----DGKLVR 206

Query: 260 -DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            DV+    ++D   K+     A   +++M  K I   +V YN LI G C+ G +  A   
Sbjct: 207 LDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGL 266

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             +M+     P V T++ L++  CK+GK+ EA + + V+ K  V P+ ++Y +++ G C+
Sbjct: 267 LHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCL 326

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
             ++ KA     +M +  V P+ H ++++I G+ +   +  A  + + M    +  +V T
Sbjct: 327 VNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVT 386

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N+LI    + G I  A  L  EM   G  P++ TYN L+ A C   H+  A++L  ++ 
Sbjct: 387 YNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLK 446

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
              I P + TY  LI G C  G +K+A++VF  +   G  ID   +  + K + +     
Sbjct: 447 DHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCK----- 501

Query: 559 KARDIHQKW 567
           K   I Q W
Sbjct: 502 KGFVIPQFW 510



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 190/373 (50%), Gaps = 3/373 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D      +I+ LCL G I  AL    K++  G   + +++  L+N LCK+G  + A  
Sbjct: 136 EPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALE 195

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++R +       +   YN  I G C+   ++ A   +S M    I P  VT+N L+  LC
Sbjct: 196 MLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLC 255

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G L DA+  L +++ ++       V T +IL+D++ K G   +A  ++  M +K+++ 
Sbjct: 256 IMGQLKDAIGLLHKMILEN---INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKP 312

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           +IV YN L+NG+CL  +++ A + F  M + G  PDV +Y+ +++  CK   +DEA   +
Sbjct: 313 NIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLF 372

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +    + PD ++Y ++I GLC  G I  A + +  M ++   P    +N ++D   + 
Sbjct: 373 EEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKN 432

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
             +  A  +   +    +  +V T+N LI    + G + DA  + +++L++G   DV+TY
Sbjct: 433 HHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTY 492

Query: 475 NLLIGASCNLGHI 487
           N +I   C  G +
Sbjct: 493 NTMIKGFCKKGFV 505



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 201/418 (48%), Gaps = 6/418 (1%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           QK   P ++    ++  L K         + R+M     + N  T +  I  + ++    
Sbjct: 62  QKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNS 121

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
            +  +FS +   G  P+ +T   L+  LC KG +  A+ F  +VLA   G   + V   T
Sbjct: 122 LSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLA--LGFQLNQVSYRT 179

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            L++   K G    AL +   +  K ++ D+V YN +I+G C +  ++ AF ++ +M+ +
Sbjct: 180 -LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAK 238

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
              P V+TYNTL+  LC  G+L +A      +    + P   ++  ++   C  G + +A
Sbjct: 239 RICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEA 298

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           +   + M++K V P    +N +++GY    +++ A SI + M   GV+ +V +++ +I  
Sbjct: 299 KNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISG 358

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             +   + +A  L +EM    IFPDV TYN LI   C  G I  AL+L  EM  RG  P+
Sbjct: 359 FCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPN 418

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKESDKA 560
           IITY  L+   C   ++ +A E+  K++   +      + IL     +  R+K++ K 
Sbjct: 419 IITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKV 476



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 164/309 (53%)

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
           T  +I    ++ S  K       ++L   M    I +++V  ++LIN F   G  S +F+
Sbjct: 66  TPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFS 125

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            F  +LK+G+ PD IT  TL+  LC +G + +A HF+  +   G   +Q+SY+T+I GLC
Sbjct: 126 VFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLC 185

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G    A E L  +  K V  +  ++N IIDG  +   +++AF     M++  +   V 
Sbjct: 186 KVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVV 245

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T+N LI      G + DA  L  +M+L+ I P V+T+++L+ A C  G +  A  ++  M
Sbjct: 246 TYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVM 305

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
           +++ + P+I+TY  L+ G+C    + +AE +F  +  +G+A D   + I+   + ++K  
Sbjct: 306 MKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMV 365

Query: 558 DKARDIHQK 566
           D+A  + ++
Sbjct: 366 DEAMKLFEE 374



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 187/392 (47%), Gaps = 11/392 (2%)

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           + +  P+P+   +   +    + N     + L   M  NGI  N VT +IL++   + G 
Sbjct: 60  LHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGH 119

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
              +      +L         D IT T L+      GD  +AL   + +     Q + V+
Sbjct: 120 NSLSFSVFSNILKKG---YEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVS 176

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKR--GFLP--DVITYNTLLNCLCKQGKLDEASHFY 354
           Y  LING C  G   +A     +ML+R  G L   DV+ YNT+++ +CK   +++A  FY
Sbjct: 177 YRTLINGLCKVGQTKAAL----EMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFY 232

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +    + P  ++Y T+I GLCI G +  A   L  M+ +++ P  + +++++D + + 
Sbjct: 233 SEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKE 292

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G +  A ++  +M+   V  N+ T+N+L+        +  A S+   M   G+ PDV +Y
Sbjct: 293 GKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSY 352

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           +++I   C +  +  A++L++EM  + I PD++TY  LI G C  G +  A ++  ++  
Sbjct: 353 SIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHD 412

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            G   + I +  L     +    DKA ++  K
Sbjct: 413 RGQPPNIITYNSLLDALCKNHHVDKAIELLTK 444


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 213/451 (47%), Gaps = 24/451 (5%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           ++M ++G  PD  T++ ++  LCK G+L+KA  ++ ++ E     N  TY+  I G C+ 
Sbjct: 62  QQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKA 121

Query: 202 NELDKALHLFSTM-ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
           + +D AL +F TM A  G  P+ VT N L+  LC    + +A   L E +A        +
Sbjct: 122 SRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAF-VLFEYMAK--AGCEPN 178

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           VI+ + L+D   K G   +A  LW +M +K+   D+VAY   + G C    ++ A     
Sbjct: 179 VISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCR 238

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGK-----------------LDEASHFYGVLSKTGVA 363
           +M+ +G   D + ++T++  LCK+G                  LDEA   +  +      
Sbjct: 239 KMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHP 298

Query: 364 PDQISYKTIIQGLCIHG---DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           P    + T+I  +C      D V   + + SM E    P    +N+++D   +   L  A
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA 358

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + M ++G+S +V T++AL+    + G +  A  L +EM  +G+FPD FT   ++ A
Sbjct: 359 QELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNA 418

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
               G +  AL   + M  RG TPD++TY  L+ G C  G + EA    AK+       D
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
              + I+     R  ++  A  I Q+ + R 
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 219/462 (47%), Gaps = 28/462 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++++ LC G ++  A  L   M + G  P+V++++ L++ LCK G L++A  +  EM E 
Sbjct: 149 SLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEK 208

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   Y +F+TG C+ N + +A      M   G + + V  + ++  LCKKG   +A
Sbjct: 209 SCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEA 268

Query: 243 VKFLGEVLA-----DDDGKATSDVIT-----STILMDSYFKNGDKFQALALWNDMFQK-- 290
              + E L      D+  K   ++I+     S  L ++      K + L     +FQ+  
Sbjct: 269 QNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMK 328

Query: 291 ---------NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
                    N++T    YN++++  C    +  A     +M   G  PDV+TY+ L++ L
Sbjct: 329 SMKEFYCPPNLET----YNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGL 384

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK GKLD A      +SK GV PD  +  +I+  L   G +  A   L +M  +   P+ 
Sbjct: 385 CKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDL 444

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +N ++DG  + G +  A +    M++   + +VF++  +I A  R G    A ++ +E
Sbjct: 445 VTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQE 504

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           M+  G+ PD   Y+ L+      G   LAL+L    L +   PD + +  ++ G C  G 
Sbjct: 505 MVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK---PDFVMHKMVVDGLCKAGK 561

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            ++A EV  ++   G   D   +  + +  R++ + DKAR +
Sbjct: 562 AEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQL 603



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 146/292 (50%), Gaps = 7/292 (2%)

Query: 135 GTALWLRRKMIQKGTVPDVL-THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           G  L+ R K +++   P  L T+N +V+ LCK   L++A  ++ EM+    SP+  TY+A
Sbjct: 320 GVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSA 379

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            + G C++ +LD+A  L   M+  G+ P+  T   +++AL K G +  A+  L  + A  
Sbjct: 380 LVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARG 439

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
              +T D++T   L+D   K G   +A+     M       D+ +Y ++I   C +G  +
Sbjct: 440 ---STPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAA 496

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A A F +M+KRG LPD + Y++LL+ L + G  D A     +L  +   PD + +K ++
Sbjct: 497 GAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALE---LLKTSLCKPDFVMHKMVV 553

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            GLC  G    A E +  M +     +   +  ++ G  + G +  A  + D
Sbjct: 554 DGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVD 605



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 143/267 (53%), Gaps = 8/267 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++ +LC   ++  A  L  +M   G  PDV+T++ LV+ LCK+G L++A  ++ EMS+  
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEG 404

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T  + +    +  ++D AL    TM   G  P+ VT+N L+  LCK G + +A+
Sbjct: 405 VFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAI 464

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            FL +++A    K T DV + TI++ +  ++G    A A++ +M ++ +  D V Y+ L+
Sbjct: 465 TFLAKMVA---AKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLL 521

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFL-PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +G   NG    A     ++LK     PD + +  +++ LCK GK ++A      ++  G 
Sbjct: 522 DGLARNGLEDLAL----ELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGF 577

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFL 389
             D  +Y  +++GL   G + KAR+ +
Sbjct: 578 PADAFTYINVVRGLRKLGKVDKARQLV 604



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 1/239 (0%)

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           QK  Q  +  YN  ++          A+  F QM +RG+ PD  TY+ +L  LCK G+LD
Sbjct: 31  QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE-KSVVPEPHIWNVI 407
           +A    G L ++GV  + I+Y  +I G C    +  A E   +M      VP+   +N +
Sbjct: 91  KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSL 150

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           + G      +S AF + + M   G   NV +++ L+    + G + +A  L +EM+    
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
            PD+  Y   +   C    +  A     +M+ +G   D + ++ +I   C +G+ +EA+
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 44/77 (57%)

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           VFTYN  + A        LA + + +M RRG  PD  TY+ +++G C  G + +A+E+  
Sbjct: 38  VFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLG 97

Query: 531 KIQTLGLAIDHIPFRIL 547
           +++  G+ ++ I + ++
Sbjct: 98  QLRESGVKLNVITYSVV 114


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 192/412 (46%), Gaps = 45/412 (10%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQK---GTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           V+  LC  G +  AL+L R M  +    + P+ +++  L+  LC      +A  ++R M 
Sbjct: 62  VLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQ 121

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    P+  TY   I G C   ++D A+ L + M  +GI PN V ++ L+H  CK G   
Sbjct: 122 DCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRW- 180

Query: 241 DAVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
              + +G+V  +  G+    DV+  T L+DS  ++G   +A  + + M ++ ++ ++V Y
Sbjct: 181 ---ESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTY 237

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL-- 357
           NVLIN  C  G +  A      M ++G  PDV+TYNTL+  L    ++DEA      +  
Sbjct: 238 NVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQ 297

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
            +T V PD +++ ++I GLC                                   + G +
Sbjct: 298 GETRVRPDLMTFNSVIHGLC-----------------------------------KIGWM 322

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             A  +R +M   G   N+  FN LI    R   +  A  L  EM   G+ PD FTY++L
Sbjct: 323 RQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSIL 382

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           I   C +  +  A     EM  +G+ P+ + Y  L+K  C +G M +A ++F
Sbjct: 383 INGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLF 434



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 188/382 (49%), Gaps = 8/382 (2%)

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANN---GIRPNRVTHNILVHALCKKGLLGDAV 243
           +  +YN  +   CR   LD AL L   M++      RPN +++  L+ ALC       AV
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L  +    D     DV+T   L+       D   A+ L N+M +  I+ ++V Y+ L+
Sbjct: 115 GLLRSM---QDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLL 171

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+C  G   S    F +M  RG  PDV+ Y  L++ LC+ GK+ +A+    ++++ G+ 
Sbjct: 172 HGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLE 231

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y  +I  +C  G + +A +   +M EK V P+   +N +I G     ++  A ++
Sbjct: 232 PNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMAL 291

Query: 424 RDLML--SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + M+     V  ++ TFN++I    + G +  A  ++  M  +G   ++  +NLLIG  
Sbjct: 292 LEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGL 351

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
             +  +  A++L DEM   G+ PD  TY+ LI G C    ++ AE   ++++  G+  + 
Sbjct: 352 LRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEP 411

Query: 542 IPFRILKKRYRRMKESDKARDI 563
           + +  L K         +ARD+
Sbjct: 412 VHYIPLLKAMCDQGMMGQARDL 433



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 211/444 (47%), Gaps = 15/444 (3%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L++M+D     C +  D   +  +IR LC    + TA+ L  +M + G  P+V+ ++ L+
Sbjct: 117 LRSMQD-----CGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLL 171

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           +  CK G  E    V  EMS     P+   Y A I   CR  ++ KA  +   M   G+ 
Sbjct: 172 HGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLE 231

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           PN VT+N+L++++CK+G + +A+     +    +     DV+T   L+       +  +A
Sbjct: 232 PNVVTYNVLINSMCKEGSVREALDLRKNM---SEKGVQPDVVTYNTLITGLSSVLEMDEA 288

Query: 281 LALWNDMFQ--KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +AL  +M Q    ++ D++ +N +I+G C  G +  A      M + G   +++ +N L+
Sbjct: 289 MALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLI 348

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             L +  K+ +A      ++ +G+ PD  +Y  +I G C    + +A  +L  M  + + 
Sbjct: 349 GGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGME 408

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLM--LSFGVSSNVFTFNALILAETRGGSIFDAF 456
           PEP  +  ++      G +  A   RDL   +      +   ++ +I    + G    A 
Sbjct: 409 PEPVHYIPLLKAMCDQGMMGQA---RDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAE 465

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
              K+M+ +G+ PD  TY++ I      G +  A ++  +M   G  PD+  +  LI+G+
Sbjct: 466 EFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGY 525

Query: 517 CARGNMKEAEEVFAKIQTLGLAID 540
            A+G+ ++  E+  ++    +A+D
Sbjct: 526 GAKGDTEKILELTREMTAKDVALD 549



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 154/336 (45%), Gaps = 41/336 (12%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE +   +  +I  +C  G +  AL LR+ M +KG  PDV+T+N L+  L  + ++++A 
Sbjct: 230 LEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAM 289

Query: 174 HVIREM--SEMRPSPNCATYNAFITGYC-------------------------------- 199
            ++ EM   E R  P+  T+N+ I G C                                
Sbjct: 290 ALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIG 349

Query: 200 ---RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
              RV+++ KA+ L   MA++G++P+  T++IL++  CK   +  A  +L E+       
Sbjct: 350 GLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQG--- 406

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              + +    L+ +    G   QA  L+N+M  +N + D  AY+ +I+G   +G+   A 
Sbjct: 407 MEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAE 465

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            +   M+  G +PD +TY+  +N   K G L  A      ++ +G  PD   + ++IQG 
Sbjct: 466 EFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGY 525

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
              GD  K  E    M  K V  +P I + I+   G
Sbjct: 526 GAKGDTEKILELTREMTAKDVALDPKIISTIVTSLG 561



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 101/237 (42%), Gaps = 12/237 (5%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A  Y   +L+RG        N  L  L     L E+     +LS      D +SY T++ 
Sbjct: 12  AAPYLAVLLRRGRGEAAARLNRHLRLL----PLPESP---ALLSALPSVRDAVSYNTVLA 64

Query: 375 GLCIHGDIVKAREFLLSML--EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL--MLSF 430
            LC  G  + A  FLL ++  E  +   P+  +        C D   A ++  L  M   
Sbjct: 65  ALCRQG-CLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDC 123

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV  +V T+  LI        +  A  L  EM   GI P+V  Y+ L+   C  G     
Sbjct: 124 GVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESV 183

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            ++++EM  RGI PD++ YT LI   C  G +K+A  V   +   GL  + + + +L
Sbjct: 184 GKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVL 240


>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
          Length = 506

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 190/388 (48%), Gaps = 10/388 (2%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKA----DHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
            P V T+  L+   C  G L+       HV+++   + P      +N  + G C     D
Sbjct: 87  TPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEP----IIFNPLLKGLCADKRTD 142

Query: 206 KALHL-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
            A+ +    M   G  PN  +H I++  LC +    +A++ L  ++ADD G    +V++ 
Sbjct: 143 DAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELL-HMMADDGGGCLPNVVSY 201

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           + + D   K GD  +A A + +M  + I  ++V Y+ +I   C    +  A     +M+K
Sbjct: 202 STVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVK 261

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G  P+  TY +L++  C  G+L EA  F   +   GV P+ ++Y + +  LC +G   +
Sbjct: 262 NGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTE 321

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           AR+   SM+++ + P+   ++ ++ GY   G L     + DLM+   +  + + FN LI 
Sbjct: 322 ARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIY 381

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A  + G + +A  +  +M   G+ P+  TYN LI   C +  +  AL L+ EM+  G++P
Sbjct: 382 ASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSP 441

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKI 532
           + ITY  +++G    G    A+E + +I
Sbjct: 442 NFITYNIMLQGLFRTGRTGTAKEFYVQI 469



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 184/376 (48%), Gaps = 6/376 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHVIREMSEMRPSPN 187
           C  G++         +++KG   + +  N L+  LC     + A D V+R M+E+   PN
Sbjct: 101 CSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELGCVPN 160

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNG--IRPNRVTHNILVHALCKKGLLGDAVKF 245
             ++   + G C  N   +AL L   MA++G    PN V+++ +   L K G    A   
Sbjct: 161 VFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYAT 220

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             E+L   D +   +V+T + ++ +  K     +A+ + + M +  +  +   Y  L++G
Sbjct: 221 YREML---DRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHG 277

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           FC +G ++ A  +  +M   G  P+V+TY++ ++ LCK G+  EA   +  + K G+ PD
Sbjct: 278 FCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPD 337

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
             +Y +++ G  I G +V+       M++  + P+ +++N +I    + G +  A  +  
Sbjct: 338 ITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFS 397

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   G+  N  T+N LI    +   + +A +L +EM+ +G+ P+  TYN+++      G
Sbjct: 398 KMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTG 457

Query: 486 HIHLALQLYDEMLRRG 501
               A + Y ++++ G
Sbjct: 458 RTGTAKEFYVQIIKSG 473



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 146/300 (48%), Gaps = 6/300 (2%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L+ L  M D G         Y     V   L  GG    A    R+M+ +  +P+V+
Sbjct: 178 QEALELLHMMADDGGGCLPNVVSYS---TVTDGLLKGGDPDKAYATYREMLDRRILPNVV 234

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++ ++  LCK   ++KA  V   M +   +PNC TY + + G+C   +L +A+     M
Sbjct: 235 TYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKM 294

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            +NG+ PN VT++  +  LCK G   +A K    ++         D+ T + L+  Y   
Sbjct: 295 CSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRG---LKPDITTYSSLLHGYAIE 351

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +   L++ M Q ++Q D   +N LI      G +  A   F +M  +G  P+ +TY
Sbjct: 352 GALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTY 411

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           NTL+N  CK  +++ A   +  +   GV+P+ I+Y  ++QGL   G    A+EF + +++
Sbjct: 412 NTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAKEFYVQIIK 471



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 142/313 (45%), Gaps = 3/313 (0%)

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
           T  V T  IL+      G      A    + +K  + + + +N L+ G C +     A  
Sbjct: 87  TPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMD 146

Query: 318 YFCQ-MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA--PDQISYKTIIQ 374
              + M + G +P+V ++  +L  LC + +  EA     +++  G    P+ +SY T+  
Sbjct: 147 IVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTD 206

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           GL   GD  KA      ML++ ++P    ++ II    +   +  A  + D M+  GV+ 
Sbjct: 207 GLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTP 266

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           N FT+ +L+      G + +A    ++M  +G+ P+V TY+  +   C  G    A +++
Sbjct: 267 NCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIF 326

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
             M++RG+ PDI TY+ L+ G+   G + E   +F  +    +  DH  F  L     + 
Sbjct: 327 YSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQ 386

Query: 555 KESDKARDIHQKW 567
            + D+A  +  K 
Sbjct: 387 GKVDEAMLVFSKM 399



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 2/122 (1%)

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           G   +A  + D +L  G+ + + + N  +  +A     +    F+         + P V 
Sbjct: 32  GGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSRFNRMARAGASMVTPTVH 91

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY +LIG  C+ G + L       ++++G   + I +  L+KG CA     +A ++  + 
Sbjct: 92  TYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRG 151

Query: 533 QT 534
            T
Sbjct: 152 MT 153


>gi|242078465|ref|XP_002444001.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
 gi|241940351|gb|EES13496.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
          Length = 824

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 133/519 (25%), Positives = 225/519 (43%), Gaps = 88/519 (16%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC   K+  A  +     + G+ PD+  ++YL+   CK G+L KA H I  M    
Sbjct: 305 VIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIRTYCKTGNLGKAWHHIEAMVSHG 364

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              NC      +    ++  + + +  F    + G+  + V +NI + A CK G + +AV
Sbjct: 365 IEINCYIVGYLLQCLKKLGMVSEVIVYFQKFRDLGLHLDGVLYNITMDAYCKLGNMNEAV 424

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L E++A   G    D I  T L++ Y   G+   A  ++  M + NI+ D+V YN+L 
Sbjct: 425 KLLNEMMA---GGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILA 481

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL------ 357
           +G+  NG +   +     M+ +G  P+ +TY   + C C++G L EA   + +L      
Sbjct: 482 SGYSRNGAVIKVYDLLEHMVDQGLEPNSLTYGVAIACFCREGNLSEAEVLFNILEEKGID 541

Query: 358 -----------------------------SKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
                                        +K G   D +S   +I  LCI   + +A   
Sbjct: 542 NIEVLYSSMVCGYLYSGWTDHAYTLFLRVAKQGNMVDNLSCSKLINSLCIDKKVEEASTV 601

Query: 389 LLSMLEKSVVPE-------------------PHIW---------------NVIIDGYGRC 414
              MLEK+ VP+                    H+W                V+++GY + 
Sbjct: 602 CSMMLEKNAVPDVISYSKLISAYCQKRDMHNAHLWFLDMVDRGLSDVIVYTVLMNGYCKV 661

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG---------SIFDAFSL--KKEML 463
           G L  A  +   M++ G+  +V  +  L+    +             + +F L  K + L
Sbjct: 662 GRLQEACDLFVQMINLGIKPDVVAYTVLLDGHIKEALHQGWQGIAKEWRSFRLRTKHKTL 721

Query: 464 LDG-----IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
           L       I PDV  Y +LI   C   ++  A  L+DEML +G+TPD+  YT LI G+C+
Sbjct: 722 LSSMKDMEIEPDVTCYTVLIDGHCKTEYLDEARGLFDEMLAKGLTPDVYAYTALINGYCS 781

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
           +G + +AE++  ++   G+  D + F +L +R  R +++
Sbjct: 782 QGEIAKAEDLLQEMTDNGMKPDVLTFSVLHQRTLRHRKA 820



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 177/380 (46%), Gaps = 20/380 (5%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I   CL G+   A  +  +M++    PDV+T+N L +   + G + K  
Sbjct: 435 LVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILASGYSRNGAVIKVY 494

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++  M +    PN  TY   I  +CR   L +A  LF+ +   GI    V ++ +V   
Sbjct: 495 DLLEHMVDQGLEPNSLTYGVAIACFCREGNLSEAEVLFNILEEKGIDNIEVLYSSMVCGY 554

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
              G    A      V    +     D ++ + L++S   +    +A  + + M +KN  
Sbjct: 555 LYSGWTDHAYTLFLRVAKQGN---MVDNLSCSKLINSLCIDKKVEEASTVCSMMLEKNAV 611

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+++Y+ LI+ +C   D+ +A  +F  M+ RG L DVI Y  L+N  CK G+L EA   
Sbjct: 612 PDVISYSKLISAYCQKRDMHNAHLWFLDMVDRG-LSDVIVYTVLMNGYCKVGRLQEACDL 670

Query: 354 YGVLSKTGVAPDQISYKTIIQG---LCIHGDI-------------VKAREFLLSMLEKSV 397
           +  +   G+ PD ++Y  ++ G     +H                 K +  L SM +  +
Sbjct: 671 FVQMINLGIKPDVVAYTVLLDGHIKEALHQGWQGIAKEWRSFRLRTKHKTLLSSMKDMEI 730

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P+   + V+IDG+ +   L  A  + D ML+ G++ +V+ + ALI      G I  A  
Sbjct: 731 EPDVTCYTVLIDGHCKTEYLDEARGLFDEMLAKGLTPDVYAYTALINGYCSQGEIAKAED 790

Query: 458 LKKEMLLDGIFPDVFTYNLL 477
           L +EM  +G+ PDV T+++L
Sbjct: 791 LLQEMTDNGMKPDVLTFSVL 810



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/404 (21%), Positives = 180/404 (44%), Gaps = 15/404 (3%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP---SPNCATYNAFITGYCRVNEL 204
           G VP +   N+L+  + + GD   +D V+R    M+    + +  + N     +   N+ 
Sbjct: 183 GFVPTLWACNFLLKFVSQSGD---SDMVVRAYDRMKCFQLTLDTQSLNIVTRSFFEANKA 239

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF------LGEVLADDDGKAT 258
           D+A  ++  M   G++P+   ++  +  LC+ G    A         L E++ +   +  
Sbjct: 240 DEAFQVWVRMIEMGVKPDVHGYSSFIIGLCECGKYDLAYNMVSRYAVLHEIIQE---RVA 296

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            + I   +++D   K     +A  +     +     D+  Y+ LI  +C  G++  A+ +
Sbjct: 297 VESIAYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIRTYCKTGNLGKAWHH 356

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
              M+  G   +      LL CL K G + E   ++      G+  D + Y   +   C 
Sbjct: 357 IEAMVSHGIEINCYIVGYLLQCLKKLGMVSEVIVYFQKFRDLGLHLDGVLYNITMDAYCK 416

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G++ +A + L  M+   +VP+   +  +I+GY   G+  NA+ + + ML   +  +V T
Sbjct: 417 LGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVT 476

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N L    +R G++   + L + M+  G+ P+  TY + I   C  G++  A  L++ + 
Sbjct: 477 YNILASGYSRNGAVIKVYDLLEHMVDQGLEPNSLTYGVAIACFCREGNLSEAEVLFNILE 536

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            +GI    + Y+ ++ G+   G    A  +F ++   G  +D++
Sbjct: 537 EKGIDNIEVLYSSMVCGYLYSGWTDHAYTLFLRVAKQGNMVDNL 580



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 126/315 (40%), Gaps = 41/315 (13%)

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG------------ 345
           A N LI  +  + D       FC + + GF+P +   N LL  + + G            
Sbjct: 155 AVNCLIKAYTTSHDAQETVEMFCHLCRLGFVPTLWACNFLLKFVSQSGDSDMVVRAYDRM 214

Query: 346 -----------------------KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG-- 380
                                  K DEA   +  + + GV PD   Y + I GLC  G  
Sbjct: 215 KCFQLTLDTQSLNIVTRSFFEANKADEAFQVWVRMIEMGVKPDVHGYSSFIIGLCECGKY 274

Query: 381 ----DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
               ++V     L  ++++ V  E   +N++IDG  +   L  A  + ++    G + ++
Sbjct: 275 DLAYNMVSRYAVLHEIIQERVAVESIAYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDL 334

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           + ++ LI    + G++  A+   + M+  GI  + +    L+     LG +   +  + +
Sbjct: 335 YGYSYLIRTYCKTGNLGKAWHHIEAMVSHGIEINCYIVGYLLQCLKKLGMVSEVIVYFQK 394

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
               G+  D + Y   +  +C  GNM EA ++  ++   GL  D I +  L   Y    E
Sbjct: 395 FRDLGLHLDGVLYNITMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGE 454

Query: 557 SDKARDIHQKWLLRN 571
           ++ A  + ++ L  N
Sbjct: 455 TENAWQVFEQMLKAN 469



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 122/314 (38%), Gaps = 29/314 (9%)

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           +GD+  + A +N+  +K  Q  + + +V+    CL    + AFAYF  +   GF  D  T
Sbjct: 42  SGDERLSCAPFNEPIRKR-QQSLSSDSVVQALRCLRRKPAVAFAYFKDINSLGFHHDFST 100

Query: 334 YNTLLNCLCK--QGKLDEASHFYGVLSKTGVAPDQI-----------------SYKT--I 372
           Y+ ++  L    QGK+  A  F  +LS TG    +I                 SY    +
Sbjct: 101 YSEIIQILSHSFQGKMLVAL-FCEILSSTGNGGPEILTLIDHLSKTCATSHVLSYAVNCL 159

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I+      D  +  E    +     VP     N ++    + GD        D M  F +
Sbjct: 160 IKAYTTSHDAQETVEMFCHLCRLGFVPTLWACNFLLKFVSQSGDSDMVVRAYDRMKCFQL 219

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           + +  + N +  +        +AF +   M+  G+ PDV  Y+  I   C  G   LA  
Sbjct: 220 TLDTQSLNIVTRSFFEANKADEAFQVWVRMIEMGVKPDVHGYSSFIIGLCECGKYDLAYN 279

Query: 493 LYD------EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +        E+++  +  + I Y  +I G C    ++EAE+V       G   D   +  
Sbjct: 280 MVSRYAVLHEIIQERVAVESIAYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSY 339

Query: 547 LKKRYRRMKESDKA 560
           L + Y +     KA
Sbjct: 340 LIRTYCKTGNLGKA 353


>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 228/455 (50%), Gaps = 13/455 (2%)

Query: 82  NPQ-AVFNA-LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALW 139
           NP   +FN+ LD+++KE++D  +       +   +  D      +++ LCL  +IG A  
Sbjct: 195 NPSLKIFNSILDVLVKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFK 254

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L + M  +G  P+ + +N +++ LCK G + +A  ++ EM E    P+  T+N  I+ YC
Sbjct: 255 LLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE----PSDVTFNVLISAYC 310

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +   L +AL L     + G  P+ VT   +V  LCK G + + V+ L  V   +      
Sbjct: 311 QEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERV---ESMGGVV 367

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DV+    L+  +   G       +  DM  K    ++  YN+L +G+C +G + SA   F
Sbjct: 368 DVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLF 427

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT-GVAPDQIS-YKTIIQGLC 377
             M   G   + +TY+TL+  LC  G++++      ++ ++ G A  +IS Y +II GL 
Sbjct: 428 NDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLY 487

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
                 +A EFL  M  + + P     ++ I G+   G + +A  + D M+  G   +V 
Sbjct: 488 KKNQFEEALEFLTKM--EKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVL 545

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            +  LI    + G++ +AF L  EM+  G FP   T+N LI A C  G +  AL+L ++M
Sbjct: 546 VYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDM 605

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           + RG  PD+ +Y+ ++   C +G+ ++A  +F ++
Sbjct: 606 VGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQM 640



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 145/318 (45%), Gaps = 34/318 (10%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC  G++   + +  ++   G V DV+ +N L+   C +G  +    V+++M    
Sbjct: 340 VVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKG 399

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYN   +GYC    LD A+ LF+ M  +GI  N +T++ L+  LC  G + D  
Sbjct: 400 CLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGF 459

Query: 244 KFLGEVLADDDGKATSDVIT-STILMDSYFKN---------------------------- 274
           K L E++ +  G A   +   ++I+   Y KN                            
Sbjct: 460 KIL-ELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILG 518

Query: 275 ----GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
               G    A  +++ M ++     ++ Y  LI+GFC +G++  AF    +M+  G+ P 
Sbjct: 519 FCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPT 578

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
             T+N L++  C QGK+  A      +   G  PD  SY  ++  LC  GD  KA    L
Sbjct: 579 APTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFL 638

Query: 391 SMLEKSVVPEPHIWNVII 408
            M+EK ++P+   WN ++
Sbjct: 639 QMVEKDILPDYSTWNSML 656



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 205/464 (44%), Gaps = 54/464 (11%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ YR   A+I  LC   +  T   +  +M    G+ PD      +V  L +   + +  
Sbjct: 127 QSTYR---ALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMI 183

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF-STMANNGIRPNRVTHNILVHA 232
            V+  +++   +P+   +N+ +    +  ++D A   +   M  NG+  +  T  IL+  
Sbjct: 184 KVLDLITKFGENPSLKIFNSILDVLVK-EDIDLAREFYRKKMMMNGVSGDDYTFGILMKG 242

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LC    +GDA K L   +    GK  + VI +T ++ +  KNG   +A +L N+M    +
Sbjct: 243 LCLTNRIGDAFKLLQ--VMKSRGKTPNTVIYNT-MIHALCKNGKVGRARSLMNEM----V 295

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           +   V +NVLI+ +C   ++  A     +    GF+PDV+T   ++  LCK G++ E   
Sbjct: 296 EPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVE 355

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               +   G   D ++Y T+I+G C+ G        L  M  K  +P    +N++  GY 
Sbjct: 356 VLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYC 415

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM---------- 462
             G L +A  + + M + G++ N  T++ LI     GG + D F + + M          
Sbjct: 416 DSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGR 475

Query: 463 -------------------------LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
                                     ++ +FP     +L I   CN G I  A ++YD+M
Sbjct: 476 ISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQM 535

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           ++ G  P ++ Y  LI G C  GN++EA E+  ++      +DH
Sbjct: 536 IKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEM------VDH 573



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/411 (22%), Positives = 171/411 (41%), Gaps = 49/411 (11%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS--PNCATYNAFITG 197
           L+ K I    VP   TH ++ + + +     +A    R  S + P+   N +TY A I  
Sbjct: 81  LQSKPISTTPVP---THQHIAHLILEQKSASQALQTFRWASNL-PNFIHNQSTYRALIHK 136

Query: 198 YCRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            C     +    +   M ++ G  P+      +V  L +  ++   +K L          
Sbjct: 137 LCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVL---------- 186

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D+IT         K G+   +L ++N +    ++ DI              D++  F
Sbjct: 187 ---DLIT---------KFGEN-PSLKIFNSILDVLVKEDI--------------DLAREF 219

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            Y  +M+  G   D  T+  L+  LC   ++ +A     V+   G  P+ + Y T+I  L
Sbjct: 220 -YRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHAL 278

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C +G + +AR  +  M+E    P    +NV+I  Y +  +L  A  + +   S G   +V
Sbjct: 279 CKNGKVGRARSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDV 334

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T   ++    + G + +   + + +   G   DV  YN LI   C LG   +  ++  +
Sbjct: 335 VTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKD 394

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           M  +G  P++ TY  L  G+C  G +  A ++F  ++T G+  + + +  L
Sbjct: 395 MEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTL 445



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 6/241 (2%)

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFY-GVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           K G  P +  +N++L+ L K+  +D A  FY   +   GV+ D  ++  +++GLC+   I
Sbjct: 191 KFGENPSLKIFNSILDVLVKE-DIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRI 249

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A + L  M  +   P   I+N +I    + G +  A S+ + M    V  +  TFN L
Sbjct: 250 GDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEM----VEPSDVTFNVL 305

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I A  +  ++  A  L ++    G  PDV T   ++G  C  G +   +++ + +   G 
Sbjct: 306 ISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGG 365

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             D++ Y  LIKG C  G  K    V   ++  G   +   + IL   Y      D A D
Sbjct: 366 VVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAID 425

Query: 563 I 563
           +
Sbjct: 426 L 426


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 192/388 (49%), Gaps = 3/388 (0%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
           V DV +   L+   C+ G++EK+  ++ E++E   SPN   Y   I G C+  E++KA  
Sbjct: 160 VLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           LF  M   G+  N  T+ +L++ L K G+     +   ++   +DG    ++ T   +M+
Sbjct: 220 LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM--QEDG-VFPNLYTYNCVMN 276

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K+G    A  ++++M ++ +  +IV YN LI G C    ++ A     QM   G  P
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           ++ITYNTL++  C  GKL +A      L   G++P  ++Y  ++ G C  GD   A + +
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M E+ + P    + ++ID + R  ++  A  +R  M   G+  +V T++ LI      
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + +A  L K M+     P+   YN +I   C  G  + AL+L  EM  + + P++ +Y
Sbjct: 457 GQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASY 516

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGL 537
             +I+  C     KEAE +  K+   G+
Sbjct: 517 RYMIEVLCKERKSKEAERLVEKMIDSGI 544



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 218/458 (47%), Gaps = 8/458 (1%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           T +T +R +  +I        +  ++    +M+  G VP     NYL+  +       + 
Sbjct: 89  TSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQW 148

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
                E ++ +   +  ++   I G C   E++K+  L   +   G  PN V +  L+  
Sbjct: 149 WSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDG 207

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKA--TSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
            CKKG +  A     E+     GK    ++  T T+L++  FKNG K Q   ++  M + 
Sbjct: 208 CCKKGEIEKAKDLFFEM-----GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED 262

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            +  ++  YN ++N  C +G    AF  F +M +RG   +++TYNTL+  LC++ KL+EA
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
           +     +   G+ P+ I+Y T+I G C  G + KA      +  + + P    +N+++ G
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           + R GD S A  +   M   G+  +  T+  LI    R  ++  A  L+  M   G+ PD
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           V TY++LI   C  G ++ A +L+  M+ +   P+ + Y  +I G+C  G+   A ++  
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLK 502

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +++   LA +   +R + +   + ++S +A  + +K +
Sbjct: 503 EMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 188/383 (49%), Gaps = 5/383 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+  C  G+I  +  L  ++ + G  P+V+ +  L++  CK G++EKA  +  EM ++ 
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  TY   I G  +     +   ++  M  +G+ PN  T+N +++ LCK G   DA 
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+    +   + +++T   L+    +     +A  + + M    I  +++ YN LI
Sbjct: 289 QVFDEM---RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345

Query: 304 NGFCLNGDISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +GFC  G +  A +  C+ LK RG  P ++TYN L++  C++G    A+     + + G+
Sbjct: 346 DGFCGVGKLGKALS-LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P +++Y  +I       ++ KA +  LSM E  +VP+ H ++V+I G+   G ++ A  
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M+      N   +N +IL   + GS + A  L KEM    + P+V +Y  +I   C
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524

Query: 483 NLGHIHLALQLYDEMLRRGITPD 505
                  A +L ++M+  GI P 
Sbjct: 525 KERKSKEAERLVEKMIDSGIDPS 547



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 5/145 (3%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLET-----DYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           IL +   R   M     +R ++E      D   +  +I   C+ G++  A  L + M++K
Sbjct: 413 ILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
              P+ + +N ++   CK G   +A  +++EM E   +PN A+Y   I   C+  +  +A
Sbjct: 473 NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532

Query: 208 LHLFSTMANNGIRPNRVTHNILVHA 232
             L   M ++GI P+    +++  A
Sbjct: 533 ERLVEKMIDSGIDPSTSILSLISRA 557


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 197/413 (47%), Gaps = 3/413 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  GK+ TAL +R  M   G  P+V+T N +V+ LCK   L+ A  +   +      P+
Sbjct: 419 LCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPD 478

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY + I G  R   +D+A  L+  M +    PN V +  L+    K G   D  K   
Sbjct: 479 AVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYN 538

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E+L       + D++     MD  FK G+  +  AL+ ++       D  +Y +LI+G  
Sbjct: 539 EMLRLG---CSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLV 595

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G    A+  F  M ++G + D   YNT+++  CK GK+++A      +   G  P  +
Sbjct: 596 KAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVV 655

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y ++I GL     + +A         K +     I++ +IDG+G+ G +  A+ I + +
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 715

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +  G++ NV+T+N L+ A  +   I +A    + M      P+  TY++LI   C +   
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF 775

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           + A   + EM ++G  P++ TYT +I G    GN+ EA+ +F K +  G   D
Sbjct: 776 NKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 198/411 (48%), Gaps = 6/411 (1%)

Query: 129 CLG--GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           CLG  G++  AL    +M +K  +P++ T+N +++ LCK G LE A  V   M +    P
Sbjct: 384 CLGRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFP 442

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N  T N  +   C+   LD A  +F  + +   RP+ VT+  L+  L + G + +A K  
Sbjct: 443 NVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLY 502

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            ++L   D     + +  T L+ ++FK G K     ++N+M +     D++  N  ++  
Sbjct: 503 EQML---DANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCV 559

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
              G+I    A F ++   GF+PD  +Y  L++ L K G   EA   +  + + G   D 
Sbjct: 560 FKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
            +Y T+I G C  G + KA + L  M  K   P    +  +IDG  +   L  A+ + + 
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
             S G+  NV  +++LI    + G I +A+ + +E++  G+ P+V+T+N L+ A      
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I  AL  +  M     TP+ ITY+ LI G C      +A   + ++Q  G 
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 211/433 (48%), Gaps = 8/433 (1%)

Query: 130 LGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS--PN 187
           + GK   A  L  +  +KG +P V+++N +++ L + G   + D  +++  EM+    PN
Sbjct: 352 MAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKG---QVDEALKKFEEMKKDAIPN 408

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
            +TYN  I   C+  +L+ AL +   M + G+ PN +T NI+V  LCK   L DA     
Sbjct: 409 LSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFE 468

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
            +   D      D +T   L++   ++G   +A  L+  M   N   + V Y  LI  F 
Sbjct: 469 GL---DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFF 525

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G        + +ML+ G  PD++  NT ++C+ K G++++    +  +   G  PD  
Sbjct: 526 KCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDAR 585

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           SY  +I GL   G   +A E   +M E+  V +   +N +IDG+ + G ++ A+ + + M
Sbjct: 586 SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 645

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
            + G    V T+ ++I    +   + +A+ L +E    GI  +V  Y+ LI     +G I
Sbjct: 646 KTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRI 705

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A  + +E++++G+TP++ T+  L+        + EA   F  ++ L    ++I + IL
Sbjct: 706 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSIL 765

Query: 548 KKRYRRMKESDKA 560
                ++++ +KA
Sbjct: 766 IHGLCKIRKFNKA 778



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 186/413 (45%), Gaps = 4/413 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR     G++  AL L  +M      PDV+ +N  ++   K G ++ A     EM    
Sbjct: 241 LIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANG 300

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TY + I   C+ + L++A+ LF  M  N   P    +N ++      G   DA 
Sbjct: 301 LVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAY 360

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L              V++   ++    + G   +AL  + +M +K+   ++  YN++I
Sbjct: 361 SLLER---QRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYNIMI 416

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G + +A      M   G  P+VIT N +++ LCK  +LD+A   +  L      
Sbjct: 417 DMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCR 476

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ++Y ++I+GL  HG + +A +    ML+ + +P   ++  +I  + +CG   +   I
Sbjct: 477 PDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKI 536

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + ML  G S ++   N  +    + G I    +L +E+   G  PD  +Y +LI     
Sbjct: 537 YNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVK 596

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            G  H A +L+  M  +G   D   Y  +I G C  G + +A ++  +++T G
Sbjct: 597 AGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKG 649



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 159/346 (45%), Gaps = 3/346 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++IR+    G+      +  +M++ G  PD+L  N  ++ + K G++EK   + +E+ 
Sbjct: 517 YTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK 576

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            +   P+  +Y   I G  +     +A  LF TM   G   +   +N ++   CK G + 
Sbjct: 577 NLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVN 636

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A + L E+           V+T   ++D   K     +A  L+ +   K I+ ++V Y+
Sbjct: 637 KAYQLLEEMKTKGH---EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYS 693

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+GF   G I  A+    +++++G  P+V T+N LL+ L K  ++ EA   +  +   
Sbjct: 694 SLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDL 753

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
              P+ I+Y  +I GLC      KA  F   M ++   P    +  +I G  + G++  A
Sbjct: 754 KCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEA 813

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
            ++ +     G  ++   +NA+I   +      DA+ L +E  L G
Sbjct: 814 DTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/415 (22%), Positives = 182/415 (43%), Gaps = 5/415 (1%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNC-ATYNAFITGYCRVNELDKALHLFSTMANN 217
           ++  L ++ D+  A +  R    +    +C   YN+ +    R  + +    +   M+  
Sbjct: 100 VIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIA 159

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G  P+  T   +V +  K   L +A  F+ + +     +      T+ I   S  ++ D 
Sbjct: 160 GFGPSNNTCIEIVLSFIKSRKLREAFTFI-QTMRKLKFRPAFSAYTNLIGALSTSRDSDC 218

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
              L L+  M +     ++  +  LI  F   G + +A +   +M      PDV+ YN  
Sbjct: 219 M--LTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVC 276

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           ++C  K GK+D A   +  +   G+  D ++Y ++I  LC    + +A E    M +   
Sbjct: 277 IDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQ 336

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           VP  + +N +I GYG  G   +A+S+ +     G   +V ++N ++    R G + +A  
Sbjct: 337 VPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALK 396

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
             +EM  D I P++ TYN++I   C  G +  AL + D M   G+ P++IT   ++   C
Sbjct: 397 KFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLC 455

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
               + +A  +F  +       D + +  L +   R    D+A  ++++ L  N+
Sbjct: 456 KAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 6/159 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E L   ++M+D   ++CT   +Y  +  +I  LC   K   A    ++M ++G  P+V
Sbjct: 740 ISEALVCFQSMKD---LKCT--PNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNV 794

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+  +++ L K G++ +AD +  +  E     + A YNA I G    N    A  LF  
Sbjct: 795 FTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEE 854

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
               G      T  +L+ +L K   +  A   +G VL +
Sbjct: 855 ARLKGCSIYTKTCVVLLDSLHKAECIEQAA-IVGAVLRE 892


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 223/447 (49%), Gaps = 3/447 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G +  A  +  K+ + G  PD +T   L+  LC  G + +A H   ++    
Sbjct: 105 LINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKG 164

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  +Y   I G C+  E   AL +   +    ++PN V +N ++ +LCK  L+  A 
Sbjct: 165 FHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHAS 224

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E++     +   DV+T T L+      G   +A+ L+N M  KNI+ D+  +N+L+
Sbjct: 225 DLCSEMIVK---RIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILV 281

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G++  A      M+K+G   +++TYN+L++      + ++A+  +  +++ GV 
Sbjct: 282 DGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVT 341

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  SY  +I GLC    + +A      M  KS+ P    +N +IDG  + G +S+A+ +
Sbjct: 342 PDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDL 401

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M + G  ++V T+++L+ A  +   +  A +L  ++   GI P+++TY +L+   C 
Sbjct: 402 VNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCK 461

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G +  A  +Y ++L +G   D+  Y  ++ G C  G   EA  + +K++  G   D + 
Sbjct: 462 NGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVT 521

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           +  L +      ++DKA  + ++ +++
Sbjct: 522 YETLVRALFENDKNDKAVKLLREMIVQ 548



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 205/405 (50%), Gaps = 3/405 (0%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           TA+   ++M  K   PD+ T N L+N  C +G L  A  V+ ++ ++   P+  T    I
Sbjct: 82  TAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLI 141

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C   ++ +ALH    +   G   ++V++  L++ LCK G    A++ L ++   D  
Sbjct: 142 KGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKI---DGL 198

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               +V+    ++DS  K+     A  L ++M  K I  D+V Y  LI G  + G +  A
Sbjct: 199 LVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEA 258

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F QML +   PDV T+N L++ LCK+G++ +A +   V+ K GV  + ++Y +++ G
Sbjct: 259 VGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDG 318

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
             +     KA     +M  + V P+   ++++I+G  +   +  A ++   M S  ++ N
Sbjct: 319 YFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPN 378

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             T+N+LI    + G I DA+ L  EM   G   DV TY+ L+ A C    +  A+ L  
Sbjct: 379 TVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLIT 438

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           ++  +GI P+I TYT L+ G C  G +K+A+ V+  +   G  +D
Sbjct: 439 KIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLD 483



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 196/393 (49%), Gaps = 3/393 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I+ LCL GK+  AL     +I KG   D +++  L+N LCK G+   A  V+R++  +
Sbjct: 139 TLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGL 198

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN   YN  I   C+   +  A  L S M    I P+ VT+  L++     G L +A
Sbjct: 199 LVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEA 258

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V    ++L  +      DV T  IL+D   K G+  +A  +   M ++ + ++IV YN L
Sbjct: 259 VGLFNQMLLKN---IKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSL 315

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+ L    + A   F  M +RG  PDV +Y+ ++N LCK   +DEA + +  +    +
Sbjct: 316 MDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSM 375

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           AP+ ++Y ++I GL  +G I  A + +  M  +    +   ++ ++D   +   +  A +
Sbjct: 376 APNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAIT 435

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   +   G+  N++T+  L+    + G + DA ++ +++L+ G   DV  YN+++   C
Sbjct: 436 LITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLC 495

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             G    AL L  +M   G  PD +TY  L++ 
Sbjct: 496 KEGLFDEALSLVSKMEDNGCIPDAVTYETLVRA 528



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 154/309 (49%), Gaps = 32/309 (10%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I    + G++  A+ L  +M+ K   PDV T N LV+ LCK G+++KA +V+
Sbjct: 238 DVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVL 297

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M +     N  TYN+ + GY  V + +KA  +F+TMA  G+ P+  +++I+++ LCK 
Sbjct: 298 AVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKT 357

Query: 237 GLLGDAVKFLGEVLADDDGKAT--------------------------------SDVITS 264
            ++ +AV    E+ +      T                                +DVIT 
Sbjct: 358 KMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITY 417

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           + L+D+  KN    +A+ L   +  + IQ +I  Y +L++G C NG +  A A +  +L 
Sbjct: 418 SSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLI 477

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           +G+  DV  YN ++N LCK+G  DEA      +   G  PD ++Y+T+++ L  +    K
Sbjct: 478 KGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDK 537

Query: 385 AREFLLSML 393
           A + L  M+
Sbjct: 538 AVKLLREMI 546



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 149/296 (50%), Gaps = 4/296 (1%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A++    M  K IQ D+  +N+LIN FC  G ++ AF+   ++ K GF PD +T  TL+ 
Sbjct: 83  AISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIK 142

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LC  GK+ EA HF+  +   G   DQ+SY T+I GLC  G+   A + L  +    V P
Sbjct: 143 GLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQP 202

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
              ++N IID   +   + +A  +   M+   +  +V T+  LI      G + +A  L 
Sbjct: 203 NVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLF 262

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            +MLL  I PDV+T+N+L+   C  G +  A  +   M+++G+  +I+TY  L+ G+   
Sbjct: 263 NQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLV 322

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRN 571
               +A  VF  +   G+  D   + I+     + K  D+A    +++H K +  N
Sbjct: 323 KQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPN 378



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 145/294 (49%), Gaps = 3/294 (1%)

Query: 268 MDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           + S+  N D   A++ +N +   +N    I  +N +++         +A ++  QM  + 
Sbjct: 37  LPSFIDNVD--DAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQ 94

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PD+ T+N L+NC C  G L+ A      + K G  PD ++  T+I+GLC++G + +A 
Sbjct: 95  IQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREAL 154

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
            F   ++ K    +   +  +I+G  + G+   A  +   +    V  NV  +N +I + 
Sbjct: 155 HFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSL 214

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            +   +  A  L  EM++  IFPDV TY  LI     +G +  A+ L+++ML + I PD+
Sbjct: 215 CKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDV 274

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            T+  L+ G C  G MK+A  V A +   G+  + + +  L   Y  +K+ +KA
Sbjct: 275 YTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKA 328



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 67/131 (51%)

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           +F FN ++ +  +      A S  K+M L  I PD+FT+N+LI   C+LGH++ A  +  
Sbjct: 64  IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLA 123

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
           ++ + G  PD +T T LIKG C  G ++EA      +   G  +D + +  L     +  
Sbjct: 124 KIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTG 183

Query: 556 ESDKARDIHQK 566
           E+  A  + +K
Sbjct: 184 ETRAALQVLRK 194



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 13/156 (8%)

Query: 71  WFSNKDSDNEGNPQAVF---NALDLILKEN-LDRLKTM----RDTGPVRCTLETDYRRHV 122
           W    +  N G P  V    + LD + K + +D+  T+    +D G     ++ +   + 
Sbjct: 399 WDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQG-----IQPNIYTYT 453

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC  G++  A  + + ++ KG   DV  +N +VN LCK G  ++A  ++ +M + 
Sbjct: 454 ILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDN 513

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
              P+  TY   +      ++ DKA+ L   M   G
Sbjct: 514 GCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 197/413 (47%), Gaps = 3/413 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  GK+ TAL +R  M   G  P+V+T N +V+ LCK   L+ A  +   +      P+
Sbjct: 419 LCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPD 478

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY + I G  R   +D+A  L+  M +    PN V +  L+    K G   D  K   
Sbjct: 479 AVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYN 538

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E+L       + D++     MD  FK G+  +  AL+ ++       D  +Y +LI+G  
Sbjct: 539 EMLRLG---CSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLV 595

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G    A+  F  M ++G + D   YNT+++  CK GK+++A      +   G  P  +
Sbjct: 596 KAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVV 655

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y ++I GL     + +A         K +     I++ +IDG+G+ G +  A+ I + +
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 715

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +  G++ NV+T+N L+ A  +   I +A    + M      P+  TY++LI   C +   
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF 775

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           + A   + EM ++G  P++ TYT +I G    GN+ EA+ +F K +  G   D
Sbjct: 776 NKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 198/411 (48%), Gaps = 6/411 (1%)

Query: 129 CLG--GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           CLG  G++  AL    +M +K  +P++ T+N +++ LCK G LE A  V   M +    P
Sbjct: 384 CLGRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFP 442

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N  T N  +   C+   LD A  +F  + +   RP+ VT+  L+  L + G + +A K  
Sbjct: 443 NVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLY 502

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            ++L   D     + +  T L+ ++FK G K     ++N+M +     D++  N  ++  
Sbjct: 503 EQML---DANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCV 559

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
              G+I    A F ++   GF+PD  +Y  L++ L K G   EA   +  + + G   D 
Sbjct: 560 FKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
            +Y T+I G C  G + KA + L  M  K   P    +  +IDG  +   L  A+ + + 
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
             S G+  NV  +++LI    + G I +A+ + +E++  G+ P+V+T+N L+ A      
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I  AL  +  M     TP+ ITY+ LI G C      +A   + ++Q  G 
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGF 790



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 211/433 (48%), Gaps = 8/433 (1%)

Query: 130 LGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS--PN 187
           + GK   A  L  +  +KG +P V+++N +++ L + G   + D  +++  EM+    PN
Sbjct: 352 MAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKG---QVDEALKKFEEMKKDAIPN 408

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
            +TYN  I   C+  +L+ AL +   M + G+ PN +T NI+V  LCK   L DA     
Sbjct: 409 LSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFE 468

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
            +   D      D +T   L++   ++G   +A  L+  M   N   + V Y  LI  F 
Sbjct: 469 GL---DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFF 525

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G        + +ML+ G  PD++  NT ++C+ K G++++    +  +   G  PD  
Sbjct: 526 KCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDAR 585

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           SY  +I GL   G   +A E   +M E+  V +   +N +IDG+ + G ++ A+ + + M
Sbjct: 586 SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 645

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
            + G    V T+ ++I    +   + +A+ L +E    GI  +V  Y+ LI     +G I
Sbjct: 646 KTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRI 705

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A  + +E++++G+TP++ T+  L+        + EA   F  ++ L    ++I + IL
Sbjct: 706 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSIL 765

Query: 548 KKRYRRMKESDKA 560
                ++++ +KA
Sbjct: 766 IHGLCKIRKFNKA 778



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 179/410 (43%), Gaps = 41/410 (10%)

Query: 129 CLG--GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           C G  GK+  A     +M   G V D +T+  ++  LCK   L +A  +   M + +  P
Sbjct: 279 CFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVP 338

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
               YN  I GY    + + A  L       G  P+ V++N ++  L +KG + +A+K  
Sbjct: 339 CAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALK-- 396

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
                                         KF+ +       +K+   ++  YN++I+  
Sbjct: 397 ------------------------------KFEEM-------KKDAIPNLSTYNIMIDML 419

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C  G + +A      M   G  P+VIT N +++ LCK  +LD+A   +  L      PD 
Sbjct: 420 CKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDA 479

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           ++Y ++I+GL  HG + +A +    ML+ + +P   ++  +I  + +CG   +   I + 
Sbjct: 480 VTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNE 539

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           ML  G S ++   N  +    + G I    +L +E+   G  PD  +Y +LI      G 
Sbjct: 540 MLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGF 599

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            H A +L+  M  +G   D   Y  +I G C  G + +A ++  +++T G
Sbjct: 600 AHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKG 649



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 204/461 (44%), Gaps = 16/461 (3%)

Query: 87  FNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQ 146
           FN L+ IL+E      ++   GP   T        + ++       K+  A    + M +
Sbjct: 146 FNCLEQILEE-----MSIAGFGPSNNTC-------IEIVLSFIKSRKLREAFTFIQTMRK 193

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
               P    +  L+  L    D +    + ++M E+  + N   +   I  + R   +D 
Sbjct: 194 LKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDA 253

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           AL L   M +N + P+ V +N+ +    K G +  A KF  E+ A  +G    DV T T 
Sbjct: 254 ALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKA--NGLVLDDV-TYTS 310

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           ++    K     +A+ L+  M Q        AYN +I G+ + G    A++   +  ++G
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            +P V++YN +L+CL ++G++DEA   +  + K  + P+  +Y  +I  LC  G +  A 
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETAL 429

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
               +M +  + P     N+++D   +   L +A SI + +       +  T+ +LI   
Sbjct: 430 VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL 489

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            R G + +A+ L ++ML     P+   Y  LI      G      ++Y+EMLR G +PD+
Sbjct: 490 GRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDL 549

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +     +      G +++   +F +I+ LG   D   + IL
Sbjct: 550 LLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTIL 590



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/415 (23%), Positives = 183/415 (44%), Gaps = 5/415 (1%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNC-ATYNAFITGYCRVNELDKALHLFSTMANN 217
           ++  L ++ D+  A +  R    +    +C   YN+ +    R  + +    +   M+  
Sbjct: 100 VIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIA 159

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G  P+  T   +V +  K   L +A  F+ + +     +      T+ I   S  ++ D 
Sbjct: 160 GFGPSNNTCIEIVLSFIKSRKLREAFTFI-QTMRKLKFRPAFSAYTNLIGALSTSRDSDC 218

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
              L L+  M +     ++  +  LI  F   G + +A +   +M      PDV+ YN  
Sbjct: 219 M--LTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVC 276

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           ++C  K GK+D A  F+  +   G+  D ++Y ++I  LC    + +A E    M +   
Sbjct: 277 IDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQ 336

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           VP  + +N +I GYG  G   +A+S+ +     G   +V ++N ++    R G + +A  
Sbjct: 337 VPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALK 396

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
             +EM  D I P++ TYN++I   C  G +  AL + D M   G+ P++IT   ++   C
Sbjct: 397 KFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLC 455

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
               + +A  +F  +       D + +  L +   R    D+A  ++++ L  N+
Sbjct: 456 KAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQ 510



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 159/346 (45%), Gaps = 3/346 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++IR+    G+      +  +M++ G  PD+L  N  ++ + K G++EK   + +E+ 
Sbjct: 517 YTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK 576

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            +   P+  +Y   I G  +     +A  LF TM   G   +   +N ++   CK G + 
Sbjct: 577 NLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVN 636

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A + L E+           V+T   ++D   K     +A  L+ +   K I+ ++V Y+
Sbjct: 637 KAYQLLEEMKTKGH---EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYS 693

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+GF   G I  A+    +++++G  P+V T+N LL+ L K  ++ EA   +  +   
Sbjct: 694 SLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDL 753

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
              P+ I+Y  +I GLC      KA  F   M ++   P    +  +I G  + G++  A
Sbjct: 754 KCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEA 813

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
            ++ +     G  ++   +NA+I   +      DA+ L +E  L G
Sbjct: 814 DTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 6/159 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E L   ++M+D   ++CT   +Y  +  +I  LC   K   A    ++M ++G  P+V
Sbjct: 740 ISEALVCFQSMKD---LKCT--PNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNV 794

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+  +++ L K G++ +AD +  +  E     + A YNA I G    N    A  LF  
Sbjct: 795 FTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEE 854

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
               G      T  +L+ +L K   +  A   +G VL +
Sbjct: 855 ARLKGCSIYTKTCVVLLDSLHKAECIEQAA-IVGAVLRE 892


>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 457

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 191/389 (49%), Gaps = 39/389 (10%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N  ++ +CK   + KA+ V+ +  ++  +P+  TYN  I GYCR   +D A ++ + M  
Sbjct: 11  NITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKE 70

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            GI P+ V++N L     +K LL  ++    E+L         DV +  ILM  YF+ G 
Sbjct: 71  AGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEML---QSGIRPDVWSYNILMHCYFRLGK 127

Query: 277 KFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
             +A  ++ D+F++  I   + +YNV+ING C NG +++A   F  + +RGF+P+V+TYN
Sbjct: 128 PEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYN 187

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            ++N LCK  +L +A          G  P+ I+Y T+++  C                  
Sbjct: 188 AMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMK-CCF----------------- 229

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
                            RCG L     I   M   G + + F +  ++ A  + G I +A
Sbjct: 230 -----------------RCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEA 272

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             + ++M+ +G+ PD+ +YN +I   C  G    AL+L DE+ ++G+  D  T+T +I G
Sbjct: 273 DEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHG 332

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            C  GN + AE+    + TLG   + + F
Sbjct: 333 LCKDGNFEGAEKHLDYMNTLGFGFNLVAF 361



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 184/460 (40%), Gaps = 78/460 (16%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY----------- 158
           ++  L  D   +  +I   C    I  A  +  +M + G  PDV+++N            
Sbjct: 34  IKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLL 93

Query: 159 -----LVNELC-------------------KIGDLEKADHVIREMSEM-RPSPNCATYNA 193
                L +E+                    ++G  E+A+ V R++ E     P+ A+YN 
Sbjct: 94  QKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNV 153

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            I G C+   ++ AL LF  +   G  P  +T+N +++ LCK   L DA + L E     
Sbjct: 154 MINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFC--- 210

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
           D     + IT T +M   F+ G   Q L + ++M +K    D  AY  ++      G I 
Sbjct: 211 DFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIE 270

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A     +M+  G +PD+ +YNT++N  C+QG+ DEA      + K G+  DQ ++  II
Sbjct: 271 EADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIII 330

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
            GLC  G+   A + L  M           +N I+D  G+ GD+  A             
Sbjct: 331 HGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAV------------ 378

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
                             +FD+  +K          D FTY  L+   C      +A +L
Sbjct: 379 -----------------KVFDSMEVK----------DSFTYTSLLHNLCRAKKFRIASKL 411

Query: 494 YDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
               +  G      T   +I G    G + EA +V  KIQ
Sbjct: 412 LVASIEDGFQILRATQRAVIDGLTTSGLVYEARKVKLKIQ 451



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 129/270 (47%), Gaps = 1/270 (0%)

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N+ I+  C +  I+ A       +K G  PD+ITYNTL++  C+   +D A +    + +
Sbjct: 11  NITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKE 70

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ PD +SY ++  G      + K+ +    ML+  + P+   +N+++  Y R G    
Sbjct: 71  AGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEE 130

Query: 420 AFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           A  + RD+     +  ++ ++N +I    + G + +A  L + +   G  P+V TYN +I
Sbjct: 131 ANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMI 190

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C    +  A ++ +E    G  P+ ITYT ++K     G +++  E+ ++++  G  
Sbjct: 191 NGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFT 250

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            D   +  +     +    ++A +I +K +
Sbjct: 251 FDGFAYCTVVAALVKTGRIEEADEIAEKMM 280



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 5/166 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L++ L+ L  MR  G        D   +  V+  L   G+I  A  +  KM+  G VPD+
Sbjct: 234 LEQGLEILSEMRRKG-----FTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDL 288

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            ++N ++N  C+ G  ++A  ++ E+ +     +  T+   I G C+    + A      
Sbjct: 289 ASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDY 348

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           M   G   N V  N ++  L K G +  AVK    +   D    TS
Sbjct: 349 MNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSMEVKDSFTYTS 394


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 211/462 (45%), Gaps = 14/462 (3%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
            +D  + + D  P+R     D   +  +I  LC  G+I  A+ L  +M Q    PD+  +
Sbjct: 25  QVDVARDLFDKMPLR-GFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMY 79

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
             LV  LC     E+   ++R M E+   P+   Y A +   CR  +  +A  +   M  
Sbjct: 80  AALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFE 139

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G+ P  VT   +++A CK+G + DA++ L E++     K   +V T   L+  +   G 
Sbjct: 140 KGLAPCVVTCTAVINAYCKEGRMSDALRVL-ELMKLRGCKP--NVWTYNALVQGFCNEGK 196

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A+ L N M    +  D V YN+LI G C++G I SAF     M   G + D  TYN 
Sbjct: 197 VHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNA 256

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L+N LCK G+ D+A   +  L   G+ P+ +++ ++I GLC  G    A +FL  M+   
Sbjct: 257 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG 316

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI---LAETRGGSIF 453
             P+ + ++  I+   +        S    ML   V  +   +  +I   L E   G + 
Sbjct: 317 CTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVA 376

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
             +    EM+  G  PDV TY   + A C  G ++ A  +  EM + G+T D + Y  L+
Sbjct: 377 RTWG---EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLM 433

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
            GH + G    A  +  ++ ++    +   + IL +   RM+
Sbjct: 434 DGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 475



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 211/459 (45%), Gaps = 11/459 (2%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR     D     ++I   C   ++  A  L  KM  +G   DV+++  L+  LC+ G +
Sbjct: 2   VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRI 61

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A  +  EM +    P+   Y A + G C     ++ L +   M   G RP+   +  +
Sbjct: 62  DEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAV 117

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           V   C++    +A + L E+   + G A   V+T T ++++Y K G    AL +   M  
Sbjct: 118 VDFRCRERKAKEAEEMLQEMF--EKGLAPC-VVTCTAVINAYCKEGRMSDALRVLELMKL 174

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           +  + ++  YN L+ GFC  G +  A     +M   G  PD +TYN L+   C  G ++ 
Sbjct: 175 RGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIES 234

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A     ++   G+  DQ +Y  +I  LC  G   +A     S+  + + P    +N +I+
Sbjct: 235 AFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLIN 294

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGI 467
           G  + G    A+   + M+S G + + +T+++ I  L + +G    +  S   EML   +
Sbjct: 295 GLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQ--EGLSFIGEMLQKDV 352

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            P    Y ++I       +  L  + + EM+  G  PD++TYT  ++ +C  G + EAE 
Sbjct: 353 KPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN 412

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           V  ++   G+ +D + +  L   +  + ++D A  I ++
Sbjct: 413 VLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 451



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 135/556 (24%), Positives = 230/556 (41%), Gaps = 95/556 (17%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L  L+ M++ G    T     R + AV+   C   K   A  + ++M +KG  P V+
Sbjct: 93  EEGLLMLRRMKELGWRPST-----RAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVV 147

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T   ++N  CK G +  A  V+  M      PN  TYNA + G+C   ++ KA+ L + M
Sbjct: 148 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 207

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G+ P+ VT+N+L+   C  G +  A + L   L + DG   +D  T   L+++  K+
Sbjct: 208 RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR--LMEGDG-LIADQYTYNALINALCKD 264

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   QA +L++ +  + I+ + V +N LING C +G    A+ +  +M+  G  PD  TY
Sbjct: 265 GRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTY 324

Query: 335 NTLLNCLCKQGKLDEASHF----------------------------YGVLSKT------ 360
           ++ +  LCK     E   F                            YG++++T      
Sbjct: 325 SSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVS 384

Query: 361 -GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G  PD ++Y T ++  CI G + +A   L+ M +  V  +   +N ++DG+   G   +
Sbjct: 385 SGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDH 444

Query: 420 AFSIRDLMLSFGVSSNVFTFNAL------------ILAETRGG-----SIFDAFSLKKEM 462
           A SI   M S     N FT+  L            +L  T  G      + D F L   M
Sbjct: 445 AVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVM 504

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD--------------------------- 495
             +   P+  TY+ ++      G    A  L                             
Sbjct: 505 KKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRY 564

Query: 496 --------EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
                    M++ G  P +++Y  L+ G    G   +A+E+F   +    + D I ++++
Sbjct: 565 LDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVI 624

Query: 548 KKRYRRMKESDKARDI 563
                +   SD +R++
Sbjct: 625 IDGLIKKGHSDISREM 640



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 126/261 (48%), Gaps = 4/261 (1%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +   + D   +N LI G+C    +  A   F +M  RGF  DV++Y TL+  LC+ G+
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           +DEA   +G + +    PD   Y  +++GLC      +    L  M E    P    +  
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           ++D   R      A  +   M   G++  V T  A+I A  + G + DA  + + M L G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             P+V+TYN L+   CN G +H A+ L ++M   G+ PD +TY  LI+G C  G+++ A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 527 EVFAKIQTLGLAIDHIPFRIL 547
            +   ++  GL  D   +  L
Sbjct: 237 RLLRLMEGDGLIADQYTYNAL 257



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 131/269 (48%), Gaps = 19/269 (7%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+  G  PDV+T+   +   C  G L +A++V+ EMS+   + +   YN  + G+  + 
Sbjct: 381 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG 440

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF----------------L 246
           + D A+ +   M +    PN+ T+ IL+  L +  L+ D +                  L
Sbjct: 441 QTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGL 500

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            +V+  ++    S   +S  +++ + ++G   +A +L + M + +I  +   Y  L+  F
Sbjct: 501 FDVMKKNEFLPNSGTYSS--ILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCF 558

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C +     A+   C M++ GF+P +++Y  LL+ L  +G+ D+A   +        +PD+
Sbjct: 559 CKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDE 618

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           I +K II GL   G    +RE ++ MLE+
Sbjct: 619 IVWKVIIDGLIKKGHSDISREMII-MLER 646



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/277 (20%), Positives = 110/277 (39%), Gaps = 20/277 (7%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +   +R  C+ G++  A  +  +M + G   D + +N L++    IG  + A  ++
Sbjct: 390 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 449

Query: 177 REMSEMRPSPNCATYNAFI-----------------TGYCRVNELDKALHLFSTMANNGI 219
           ++M+ +   PN  TY   +                  G  +  EL     LF  M  N  
Sbjct: 450 KQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEF 509

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            PN  T++ ++    + G   +A   +  ++ +D      D+ T+  L+  + K+     
Sbjct: 510 LPNSGTYSSILEGFSEDGRTEEATSLVS-LMKEDSISLNEDIYTA--LVTCFCKSKRYLD 566

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  L   M Q      +++Y  L++G    G    A   F     + + PD I +  +++
Sbjct: 567 AWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIID 626

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            L K+G  D +     +L +    P   +Y  + + L
Sbjct: 627 GLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 663


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 201/387 (51%), Gaps = 24/387 (6%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKI---GDLEKADHVIREMS 180
           VI  LC  GK+  A  +   M   G  P+V+++N L++  CK+   G + KAD V++EM 
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   SPN  T+N  I G+ + + L  +L +F  M +  + PN +T+N L++ LC  G + 
Sbjct: 289 ENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKIN 348

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+    ++++        ++IT   L++ + KNG   +AL +++ +  +  +     YN
Sbjct: 349 EAIGMRDKMVS---AGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYN 405

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI+ +C  G I   FA   +M + G +PDV TYN L+  LC+ G ++ A   +  L+  
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNK 465

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ PD +++  +++G C  G+  KA   L  M +  + P    +N+++ GY + G+L  A
Sbjct: 466 GL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAA 524

Query: 421 FSIRDLM-LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
            ++R  M     +  NV ++N L+   ++ G + DA  L  EML  G+ P+  TY +   
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEI--- 581

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDI 506
                        + +EM+ +G  PDI
Sbjct: 582 -------------VKEEMVDKGFVPDI 595



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 196/380 (51%), Gaps = 9/380 (2%)

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
           +L ++MI++   P+V T N ++N LCK G + KA  V+ +M     SPN  +YN  I GY
Sbjct: 209 YLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGY 268

Query: 199 CRV---NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
           C++    ++ KA  +   M  N + PN  T NIL+    K   L  ++K   E+L  D  
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQD-- 326

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               +VIT   L++     G   +A+ + + M    +Q +++ Y+ LINGFC NG +  A
Sbjct: 327 -VIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEA 385

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              F  +  +G  P    YN L++  CK GK+D+       + + G+ PD  +Y  +I G
Sbjct: 386 LDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           LC +G+I  A++ L   L    +P+   ++++++GY   G+   A  +   M   G+   
Sbjct: 446 LCRNGNIEAAKK-LFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPR 504

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGASCNLGHIHLALQLY 494
             T+N ++    + G++  A +++ +M  +  +  +V +YN+L+      G +  A  L 
Sbjct: 505 HLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564

Query: 495 DEMLRRGITPDIITYTELIK 514
           +EML +G+ P+ ITY E++K
Sbjct: 565 NEMLEKGLVPNRITY-EIVK 583



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 183/329 (55%), Gaps = 9/329 (2%)

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS-DVITSTIL 267
           +L+  M    I+PN  T N++++ALCK G +  A     +V+ D      S +V++   L
Sbjct: 209 YLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA----RDVMEDMKVYGYSPNVVSYNTL 264

Query: 268 MDSYFK---NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           +D Y K   NG  ++A A+  +M +  +  ++  +N+LI+GF  + ++  +   F +ML 
Sbjct: 265 IDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLD 324

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           +  +P+VITYN+L+N LC  GK++EA      +   GV P+ I+Y ++I G C +G + +
Sbjct: 325 QDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKE 384

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A +   S+  +   P   ++N++ID Y + G + + F++++ M   G+  +V T+N LI 
Sbjct: 385 ALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              R G+I  A  L  ++   G+ PD+ T+++L+   C+ G    A  L  EM + G+ P
Sbjct: 445 GLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKP 503

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQ 533
             +TY  ++KG+C  GN+K A  +  +++
Sbjct: 504 RHLTYNIMMKGYCKEGNLKAATNMRTQME 532



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 188/379 (49%), Gaps = 2/379 (0%)

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
           +++ +EM   +  PN  T+N  I   C+  +++KA  +   M   G  PN V++N L+  
Sbjct: 208 EYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDG 267

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
            CK G  G   K    +    + + + ++ T  IL+D ++K+ +   +L ++ +M  +++
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDV 327

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             +++ YN LING C  G I+ A     +M+  G  P++ITY++L+N  CK G + EA  
Sbjct: 328 IPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALD 387

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            +  +   G  P    Y  +I   C  G I         M  + +VP+   +N +I G  
Sbjct: 388 MFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           R G++  A  + D + + G+  ++ TF+ L+      G    A  L KEM   G+ P   
Sbjct: 448 RNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHL 506

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLR-RGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
           TYN+++   C  G++  A  +  +M + R +  ++ +Y  L++G+  +G +++A  +  +
Sbjct: 507 TYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNE 566

Query: 532 IQTLGLAIDHIPFRILKKR 550
           +   GL  + I + I+K+ 
Sbjct: 567 MLEKGLVPNRITYEIVKEE 585



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 161/323 (49%), Gaps = 39/323 (12%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           LM +  K         L+ +M ++ IQ ++  +NV+IN  C  G ++ A      M   G
Sbjct: 194 LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 327 FLPDVITYNTLLNCLCK---QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           + P+V++YNTL++  CK    GK+ +A      + +  V+P+  ++  +I G     ++ 
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLP 313

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF---- 439
            + +    ML++ V+P    +N +I+G    G ++ A  +RD M+S GV  N+ T+    
Sbjct: 314 GSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLI 373

Query: 440 -------------------------------NALILAETRGGSIFDAFSLKKEMLLDGIF 468
                                          N LI A  + G I D F+LK+EM  +GI 
Sbjct: 374 NGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PDV TYN LI   C  G+I  A +L+D++  +G+ PD++T+  L++G+C+RG  ++A  +
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAML 492

Query: 529 FAKIQTLGLAIDHIPFRILKKRY 551
             ++  +GL   H+ + I+ K Y
Sbjct: 493 LKEMSKMGLKPRHLTYNIMMKGY 515



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 147/287 (51%), Gaps = 23/287 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC GGKI  A+ +R KM+  G  P+++T++ L+N  CK G +++A  +   +   
Sbjct: 336 SLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQ 395

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P    YN  I  YC++ ++D    L   M   GI P+  T+N L+  LC+ G +  A
Sbjct: 396 GTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            K   ++      K   D++T  ILM+ Y   G+  +A  L  +M +  ++   + YN++
Sbjct: 456 KKLFDQL----TNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIM 511

Query: 303 INGFCLNGDISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           + G+C  G++ +A     QM K R    +V +YN LL    ++GKL++A+     + + G
Sbjct: 512 MKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP--EPHIWNV 406
           + P++I+Y           +IVK       M++K  VP  E H++NV
Sbjct: 572 LVPNRITY-----------EIVKEE-----MVDKGFVPDIEGHLFNV 602



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 135/274 (49%), Gaps = 4/274 (1%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            +D + +NG   Q  ++++ +    N+  + +  ++L+  +  N      F  F +    
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYY 182

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G+    ++   L+  L KQ +  +  + Y  + +  + P+  ++  +I  LC  G + KA
Sbjct: 183 GYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGY---GRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
           R+ +  M      P    +N +IDGY   G  G +  A ++   M+   VS N+ TFN L
Sbjct: 243 RDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNIL 302

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    +  ++  +  + KEML   + P+V TYN LI   CN G I+ A+ + D+M+  G+
Sbjct: 303 IDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGV 362

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
            P++ITY  LI G C  G MKEA ++F  ++  G
Sbjct: 363 QPNLITYHSLINGFCKNGMMKEALDMFDSVKGQG 396



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 117/239 (48%), Gaps = 24/239 (10%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           ++KE LD   +++  G    T     R +  +I   C  GKI     L+ +M ++G VPD
Sbjct: 381 MMKEALDMFDSVKGQGTRPTT-----RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD 435

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V T+N L+  LC+ G++E A  +  +++  +  P+  T++  + GYC   E  KA  L  
Sbjct: 436 VGTYNCLIAGLCRNGNIEAAKKLFDQLTN-KGLPDLVTFHILMEGYCSRGESRKAAMLLK 494

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M+  G++P  +T+NI++   CK+G L  A     ++  + + +   +V +  +L+  Y 
Sbjct: 495 EMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQM--EKERRLRMNVASYNVLLQGYS 552

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
           + G    A  L N+M +K +  + + Y ++                  +M+ +GF+PD+
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITYEIVKE----------------EMVDKGFVPDI 595



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 3/121 (2%)

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
           +G   +  +   L++A  +     D   L KEM+   I P+VFT+N++I A C  G ++ 
Sbjct: 182 YGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHC---ARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           A  + ++M   G +P++++Y  LI G+C     G M +A+ V  ++    ++ +   F I
Sbjct: 242 ARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNI 301

Query: 547 L 547
           L
Sbjct: 302 L 302


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 212/455 (46%), Gaps = 3/455 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E        ++  LC+ G +  A+     +   G   D  T   ++N LCK+G    A 
Sbjct: 92  VEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAAL 151

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             +++M E   + +   Y+A + G C+   + +AL LFS M   GI+PN  T+N L+H L
Sbjct: 152 SYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGL 211

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C      +A   L  ++         DV T  ++   + K G   +A ++++ M    I+
Sbjct: 212 CNFDRWKEAAPLLANMMRKG---IMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIE 268

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++V YN +I   C+   +  A   F  M+++G LP+++TYN+L++  C+   +++A +F
Sbjct: 269 HNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYF 328

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
            G +   G+ PD +++ T+I G C  G  V A+E    M +   +P+     +I+DG  +
Sbjct: 329 LGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFK 388

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
           C   S A S+   +       ++  ++ ++      G + DA  L   +   G+  DV T
Sbjct: 389 CHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVT 448

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN++I   C  G +  A  L  +M   G  PD  TY   ++G   R  + ++ +    ++
Sbjct: 449 YNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMK 508

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             G   +    ++L   +   KE+   +   QK++
Sbjct: 509 GKGFRANATTTKLLINYFSANKENRAFQVFLQKFV 543



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 203/468 (43%), Gaps = 38/468 (8%)

Query: 134 IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           +  AL    KM+     P V   N L   + K+     A  +I+ MS +   PN +T+N 
Sbjct: 7   VDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNI 66

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            I   CR+N       +   M   G+ P+ VT   +V+ LC +G +  A++F+  +    
Sbjct: 67  VINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHL---K 123

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
           D    SD  T   +++   K G    AL+    M ++N   D+ AY+ +++G C +G + 
Sbjct: 124 DMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVF 183

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A   F QM  +G  P++ TYN L++ LC   +  EA+     + + G+ PD  ++  I 
Sbjct: 184 EALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIA 243

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
                 G I +A+     M    +      +N II  +     + +A  + DLM+  G  
Sbjct: 244 GRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCL 303

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            N+ T+N+LI       ++  A     EM+ +G+ PDV T++ LIG  C  G    A +L
Sbjct: 304 PNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKEL 363

Query: 494 YDEMLRRGITP-----------------------------------DIITYTELIKGHCA 518
           +  M + G  P                                   DII Y+ ++ G C+
Sbjct: 364 FFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCS 423

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            G + +A E+F+ + + G+ ID + + I+     +    D A D+  K
Sbjct: 424 SGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMK 471



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 209/460 (45%), Gaps = 38/460 (8%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI 195
           TA+ L + M   G  P+V THN ++N LC++        V+  M ++   P+  T+   +
Sbjct: 44  TAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIV 103

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
            G C    + +A+     + + G   +R T   +++ LCK G    A+ +L ++   ++ 
Sbjct: 104 NGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKM---EEQ 160

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               DV   + ++D   K+G  F+AL L++ M  K IQ ++  YN LI+G C       A
Sbjct: 161 NCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEA 220

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                 M+++G +PDV T+N +     K G +  A   +  +   G+  + ++Y +II  
Sbjct: 221 APLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGA 280

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C+   +  A E    M+ K  +P    +N +I G+    +++ A      M++ G+  +
Sbjct: 281 HCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPD 340

Query: 436 VFTFNALILAETRGGSIFDA----FSLKKE----------MLLDGIFP------------ 469
           V T++ LI    + G    A    F + K           ++LDG+F             
Sbjct: 341 VVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFR 400

Query: 470 ---------DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
                    D+  Y++++   C+ G ++ AL+L+  +  +G+  D++TY  +I G C  G
Sbjct: 401 ELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEG 460

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            + +AE++  K++  G   D   + +  +   R  E  K+
Sbjct: 461 LLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKS 500



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 164/365 (44%), Gaps = 72/365 (19%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           L  LK M +     C L  D   + AV+  LC  G +  AL L  +M  KG  P++ T+N
Sbjct: 151 LSYLKKMEEQ---NCNL--DVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYN 205

Query: 158 YLVNELC-----------------------------------KIGDLEKADHVIREMSEM 182
            L++ LC                                   K G + +A  +   M  M
Sbjct: 206 CLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHM 265

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N  TYN+ I  +C +N++  A+ +F  M   G  PN VT+N L+H  C+   +  A
Sbjct: 266 GIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKA 325

Query: 243 VKFLGEVL---ADDD--------------GKATS---------------DVITSTILMDS 270
           + FLGE++    D D              GK  +               D+ T  I++D 
Sbjct: 326 MYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDG 385

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
            FK     +A++L+ ++ + N   DI+ Y++++NG C +G ++ A   F  +  +G   D
Sbjct: 386 LFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKID 445

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+TYN ++N LCK+G LD+A      + + G  PD+ +Y   +QGL    +I K+ ++L+
Sbjct: 446 VVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLM 505

Query: 391 SMLEK 395
            M  K
Sbjct: 506 FMKGK 510


>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 207/450 (46%), Gaps = 3/450 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           RC  + D   + A+I      G+   A+ +   M++    P   T+N L+N     G+ +
Sbjct: 192 RC--KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 249

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A +V ++M+E    P+  T+N  ++ Y R N+  K L  F  M    IRP+  T NI++
Sbjct: 250 EALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVI 309

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           + L K G  G A+      + +   +   DV+T T ++  Y   G        +N M  +
Sbjct: 310 YCLVKLGQNGKAIDIFNS-MKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAE 368

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            ++ +IV+YN LI  +  +G    AF+ F ++ K GF PDV++Y +LLN   K GK ++A
Sbjct: 369 GLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKA 428

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              + ++ +    P+ +SY  +I      G + +A E L  M    V P       ++  
Sbjct: 429 MKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAA 488

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            GRCG      S+       G+  N   +N+ I +    G    A SL + M    + PD
Sbjct: 489 CGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPD 548

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             TYN+LI   C +     AL   DEM+   I      Y+ +I  +  +G + EAE +F 
Sbjct: 549 PVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFT 608

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           K++ +G   D I +  +   Y   +  +KA
Sbjct: 609 KMKMVGCRPDVITYTAMIHAYDVAENWEKA 638



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 168/395 (42%), Gaps = 42/395 (10%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           +++A  +  EM + R  P+  TYNA I  + R  +   A+++   M    I P+R T+N 
Sbjct: 178 VDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNN 237

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF---------- 278
           L++A    G   +A+    ++  +  G    D++T  I++ +Y K G+++          
Sbjct: 238 LINACGSSGNWKEALNVCKKMTENGVG---PDLVTHNIVLSAY-KRGNQYSKVLSYFELM 293

Query: 279 --------------------------QALALWNDMFQKNIQ--TDIVAYNVLINGFCLNG 310
                                     +A+ ++N M +K  +   D+V +  +I+ + + G
Sbjct: 294 KGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCG 353

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            I +    F  ML  G  P++++YN L+      G   EA   +  + K G  PD +SY 
Sbjct: 354 QIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYT 413

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           +++      G   KA +    M      P    +N +ID YG  G L+ A  I   M   
Sbjct: 414 SLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERN 473

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           GV  N+ +   L+ A  R G      S+     L GI  +   YN  IG+  ++G    A
Sbjct: 474 GVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKA 533

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           L LY  M  + + PD +TY  LI G C      EA
Sbjct: 534 LSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEA 568



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 192/413 (46%), Gaps = 12/413 (2%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCA---TYNAFITGYCRVNELDKALHLFSTMA 215
           L+ E+ +IG LE +  V R M   +    CA    YN  I  + R N +D+A  LF  M 
Sbjct: 132 LIREITQIGSLEHSVQVFRWMKNQKNY--CARNDIYNMMIRLHARHNIVDQARGLFFEMQ 189

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
               +P+  T+N L++A  + G    A+  + ++L      + S   T   L+++   +G
Sbjct: 190 KWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRS---TYNNLINACGSSG 246

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
           +  +AL +   M +  +  D+V +N++++ +      S   +YF  M      PD  T N
Sbjct: 247 NWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLN 306

Query: 336 TLLNCLCKQGKLDEASHFYGVLS--KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
            ++ CL K G+  +A   +  +   ++   PD +++ TII    + G I   +    +ML
Sbjct: 307 IVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTML 366

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            + + P    +N +I  Y   G    AFS+ + +   G   +V ++ +L+ A  + G   
Sbjct: 367 AEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPE 426

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A  + + M  +   P++ +YN LI A  + G +  A+++  EM R G+ P+I++   L+
Sbjct: 427 KAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLL 486

Query: 514 KGHCAR-GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
              C R G   + + V +  +  G+ ++   +      Y  + E DKA  +++
Sbjct: 487 AA-CGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYR 538



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 112/502 (22%), Positives = 209/502 (41%), Gaps = 48/502 (9%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           KE L+  K M + G     +  D   H  V+     G +    L     M      PD  
Sbjct: 249 KEALNVCKKMTENG-----VGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTT 303

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPS--PNCATYNAFITGYCRVNELDKALHLFS 212
           T N ++  L K+G   KA  +   M E R    P+  T+   I  Y    +++     F+
Sbjct: 304 TLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFN 363

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
           TM   G++PN V++N L+ A    G+  +A     E+  +       DV++ T L+++Y 
Sbjct: 364 TMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNG---FHPDVVSYTSLLNAYG 420

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K+G   +A+ ++  M + + + ++V+YN LI+ +   G ++ A     +M + G  P+++
Sbjct: 421 KSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIV 480

Query: 333 T-----------------------------------YNTLLNCLCKQGKLDEASHFYGVL 357
           +                                   YN+ +      G+ D+A   Y  +
Sbjct: 481 SICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAM 540

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
               V PD ++Y  +I G C      +A  FL  M++  +     +++ +I  Y + G +
Sbjct: 541 RTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQV 600

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
           + A S+   M   G   +V T+ A+I A     +   A +L  EM  D + PD    + L
Sbjct: 601 TEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSL 660

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           + A    G     L L + M  + I  +  ++ E++   C+   ++E  E+   I+ +  
Sbjct: 661 MRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSA-CSL--LREWREIIGLIKLMEP 717

Query: 538 AIDHIPFRILKKRYRRMKESDK 559
           +I  +   +L +    + +S K
Sbjct: 718 SISVVSIGLLNQLLHFLGKSGK 739



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 167/392 (42%), Gaps = 3/392 (0%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           + G  PDV+++  L+N   K G  EKA  V   M      PN  +YNA I  Y     L 
Sbjct: 402 KNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLT 461

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +A+ +   M  NG++PN V+   L+ A C  G  G  VK    + A +      +     
Sbjct: 462 EAVEILHEMERNGVQPNIVSICTLL-AAC--GRCGQKVKIKSVLSAAELRGIKLNTTAYN 518

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
             + SY   G+  +AL+L+  M  K ++ D V YNVLI+G C       A  +  +M+  
Sbjct: 519 SAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDL 578

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
                   Y++++    KQG++ EA   +  +   G  PD I+Y  +I    +  +  KA
Sbjct: 579 KIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKA 638

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
               L M    V P+    + ++  + + G  +    + + M    +  N  +F  ++ A
Sbjct: 639 SALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSA 698

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
            +      +   L K M        +   N L+      G I   ++L+ +++  G   +
Sbjct: 699 CSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEIN 758

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
             TY+ L+K   A GN ++  EV   ++  GL
Sbjct: 759 FYTYSILLKNLLAAGNWRKYIEVLQWMEEAGL 790


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 186/374 (49%), Gaps = 3/374 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM++ G  P ++T   L+N  C+    ++A  ++  M      PN   YN  I G C+  
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +L+ AL +F  M   GIR + VT+N L+  L   G   DA + L +++     K   +VI
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR---KIDPNVI 255

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             T L+D++ K G+  +A  L+ +M ++++  ++  YN LINGFC++G +  A   F  M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           + +G  PDV+TYNTL+   CK  ++++    +  ++  G+  D  +Y T+I G C  G +
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A++    M++  V P+   +N+++D     G +  A  + + +    +  ++ T+N +
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    R   + +A+ L + +   G+ PD   Y  +I   C  G    A +L   M   G 
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 495

Query: 503 TPDIITYTELIKGH 516
            P    Y E ++ H
Sbjct: 496 MPSERIYDETLRDH 509



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 208/423 (49%), Gaps = 8/423 (1%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
            D+ R + VI  +    K    ++L  KM   G   D+ +   L++  C+   L  A  +
Sbjct: 80  VDFTRVLTVIAKM---NKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           + +M ++   P+  T  + + G+C+ N   +A+ L  +M   G  PN V +N +++ LCK
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196

Query: 236 KGLLGDAVKFLGEVLADDDGKAT-SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
              L +A+    EV    + K   +D +T   L+     +G    A  L  DM ++ I  
Sbjct: 197 NRDLNNAL----EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 252

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           +++ +  LI+ F   G++  A   + +M++R  +P+V TYN+L+N  C  G L +A + +
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
            ++   G  PD ++Y T+I G C    +    +    M  + +V +   +N +I GY + 
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G L+ A  + + M+  GVS ++ T+N L+      G I  A  + +++    +  D+ TY
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 432

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N++I   C    +  A  L+  + R+G+ PD I Y  +I G C +G  +EA+++  +++ 
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKE 492

Query: 535 LGL 537
            G 
Sbjct: 493 DGF 495



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 214/409 (52%), Gaps = 12/409 (2%)

Query: 156 HNY---LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           H+Y   L NEL  I   + A  +  EM + RP P+   +   +T   ++N+ D  ++L+ 
Sbjct: 45  HHYRERLRNELHCI-KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYH 103

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M N GI  +  +  IL+H  C+   L  A+  LG+++    G   S V   ++L  + F
Sbjct: 104 KMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKL--GFRPSIVTLGSLL--NGF 159

Query: 273 KNGDKFQ-ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
             G++FQ A++L + M       ++V YN +ING C N D+++A   F  M K+G   D 
Sbjct: 160 CQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADA 219

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TYNTL++ L   G+  +A+     + K  + P+ I +  +I      G++++AR     
Sbjct: 220 VTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKE 279

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M+ +SVVP    +N +I+G+   G L +A  + DLM+S G   +V T+N LI    +   
Sbjct: 280 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 339

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + D   L  EM   G+  D FTYN LI   C  G +++A ++++ M+  G++PDI+TY  
Sbjct: 340 VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 399

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKES 557
           L+   C  G +++A  +   +Q   + +D I + I+ +   R  ++KE+
Sbjct: 400 LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 208/437 (47%), Gaps = 16/437 (3%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K   A  L  +M+Q   +P ++    ++  + K+   +   ++  +M  +  S +  ++ 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I  +CR + L  AL L   M   G RP+ VT   L++  C+     +AV  +  +  D
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM--D 176

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
             G   + VI +T++ +   KN D   AL ++  M +K I+ D V YN LI+G   +G  
Sbjct: 177 GFGFVPNVVIYNTVI-NGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           + A      M+KR   P+VI +  L++   K+G L EA + Y  + +  V P+  +Y ++
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I G CIHG +  A+     M+ K   P+   +N +I G+ +   + +   +   M   G+
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             + FT+N LI    + G +  A  +   M+  G+ PD+ TYN+L+   CN G I  AL 
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 415

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF-------- 544
           + +++ +  +  DIITY  +I+G C    +KEA  +F  +   G+  D I +        
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475

Query: 545 -----RILKKRYRRMKE 556
                R   K  RRMKE
Sbjct: 476 RKGLQREADKLCRRMKE 492



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 139/292 (47%), Gaps = 3/292 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   +  +I  L   G+   A  L R M+++   P+V+    L++   K G+L +A 
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           ++ +EM      PN  TYN+ I G+C    L  A ++F  M + G  P+ VT+N L+   
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   + D +K   E+          D  T   L+  Y + G    A  ++N M    + 
Sbjct: 335 CKSKRVEDGMKLFCEMTYQG---LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DIV YN+L++  C NG I  A      + K     D+ITYN ++  LC+  KL EA   
Sbjct: 392 PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCL 451

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           +  L++ GV PD I+Y T+I GLC  G   +A +    M E   +P   I++
Sbjct: 452 FRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 145/289 (50%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            + L++ M    I  D+ ++ +LI+ FC    +S A A   +M+K GF P ++T  +LLN
Sbjct: 98  VIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLN 157

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C+  +  EA      +   G  P+ + Y T+I GLC + D+  A E    M +K +  
Sbjct: 158 GFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRA 217

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   +N +I G    G  ++A  +   M+   +  NV  F ALI    + G++ +A +L 
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           KEM+   + P+VFTYN LI   C  G +  A  ++D M+ +G  PD++TY  LI G C  
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             +++  ++F ++   GL  D   +  L   Y +  + + A+ +  + +
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386



 Score = 46.6 bits (109), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 52/113 (46%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V C +  D   +  ++  LC  GKI  AL +   + +     D++T+N ++  LC+   L
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 445

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           ++A  + R ++     P+   Y   I+G CR     +A  L   M  +G  P+
Sbjct: 446 KEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 223/474 (47%), Gaps = 44/474 (9%)

Query: 129 CLGGK--IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           CLG K  +  AL L   M +K   P+  T+N +++ LC  G +E+A  ++ EM      P
Sbjct: 229 CLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFP 287

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N  T N  +   C+  +L++A  +F + +  G  P+ VT+  L+  L KKG + +A +  
Sbjct: 288 NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLF 347

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            ++L   D    ++ +  T L+ ++F +G K     ++ ++ ++  + D+   N  ++  
Sbjct: 348 EKML---DAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCV 404

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
              G++      F  +   GFLPDV +Y+ L++ L K G+  E S+ +  + + G A D 
Sbjct: 405 FKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDA 464

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI------------------- 407
            +Y  ++ G C  G + KA E L  M EK V P    +  I                   
Sbjct: 465 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 524

Query: 408 ----------------IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
                           IDG+G+ G +  A+ I + M+  G++ NV+T+N+L+ A  +   
Sbjct: 525 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 584

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           I +A    + M      P+ +TY++LI   C +   + A   + +M ++G+ P+++TYT 
Sbjct: 585 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 644

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           +I G    GN+ +A  +F + +  G   D   F  L      M  +++A + +Q
Sbjct: 645 MISGLAKVGNITDAYSLFERFKANGGIPDAASFNAL---IEGMSNANRAMEAYQ 695



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 195/424 (45%), Gaps = 32/424 (7%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LCLGG++  A  +  +M      P++LT N +V+ LCK   LE+A  +    S+  
Sbjct: 260 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 319

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH-----NILVHA------ 232
            +P+C TY + I G  +  ++D+A  LF  M + G   N V +     N  +H       
Sbjct: 320 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 379

Query: 233 -----LCKKG------LLG---DAVKFLGEV----LADDDGKATS---DVITSTILMDSY 271
                L ++G      LL    D V   GEV    +  +D ++     DV + +IL+   
Sbjct: 380 KVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 439

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K G   +   +++ M Q+    D  AYN +++GFC +G +  A+    +M ++   P V
Sbjct: 440 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 499

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            TY  +++ L K  +LDEA   +      G+  + + Y ++I G    G I +A   L  
Sbjct: 500 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 559

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M++K + P  + WN ++D   +  +++ A      M       N +T++ LI    R   
Sbjct: 560 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 619

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
              AF   ++M   G+ P+V TY  +I     +G+I  A  L++     G  PD  ++  
Sbjct: 620 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNA 679

Query: 512 LIKG 515
           LI+G
Sbjct: 680 LIEG 683



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/494 (23%), Positives = 220/494 (44%), Gaps = 37/494 (7%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   + ++I  LC  G++G A  L  +M  + +VP    +N ++      G  E A 
Sbjct: 146 LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAY 205

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++  + E    P+  ++N+ +T   +  ++D+AL LF  M  +   PN  T+NI++  L
Sbjct: 206 KLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDML 264

Query: 234 CKKGLLGDAVKFLGE--------------VLADDDGKA------------------TSDV 261
           C  G + +A + L E              ++ D   KA                    D 
Sbjct: 265 CLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDC 324

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T   L+D   K G   +A  L+  M       + V Y  LI  F ++G        F +
Sbjct: 325 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKE 384

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           +++RG  PD+   NT ++C+ K G++++    +  +   G  PD  SY  +I GL   G 
Sbjct: 385 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 444

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
             +      +M ++    +   +N ++DG+ + G +  A+ I + M    V   V T+ A
Sbjct: 445 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 504

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           ++    +   + +A+ L +E    GI  +V  Y+ LI     +G I  A  + +EM+++G
Sbjct: 505 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 564

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA- 560
           +TP++ T+  L+        + EA   F  ++ +    +   + IL     R+++ +KA 
Sbjct: 565 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 624

Query: 561 ---RDIHQKWLLRN 571
              +D+ ++ L+ N
Sbjct: 625 VFWQDMQKQGLVPN 638



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/442 (22%), Positives = 204/442 (46%), Gaps = 6/442 (1%)

Query: 129 CLG--GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           C G  G +  A     ++  +G  PD +++  ++  LCK G L +A+ +  +M   R  P
Sbjct: 124 CFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVP 183

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
               YN  I GY      + A  L   +   G  P+ V+ N ++  L KK  + +A+   
Sbjct: 184 CAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF 243

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            EV+  D   A  +  T  I++D     G   +A  + ++M   ++  +++  N++++  
Sbjct: 244 -EVMKKD---AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 299

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C    +  A+  F    +RG  PD +TY +L++ L K+G++DEA   +  +   G   + 
Sbjct: 300 CKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 359

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           + Y ++I+   IHG      +    ++ +   P+  + N  +D   + G++     I + 
Sbjct: 360 VVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFED 419

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           + S+G   +V +++ LI   T+ G   +  ++   M   G   D   YN ++   C  G 
Sbjct: 420 IRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGK 479

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +H A ++ +EM  + + P + TY  ++ G      + EA  +F + ++ G+ ++ + +  
Sbjct: 480 VHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSS 539

Query: 547 LKKRYRRMKESDKARDIHQKWL 568
           L   + ++   D+A  I ++ +
Sbjct: 540 LIDGFGKVGRIDEAYLILEEMM 561



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/456 (20%), Positives = 199/456 (43%), Gaps = 4/456 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R      +  +  +I  L    +   AL L R+M + G    V     LV  L + G + 
Sbjct: 38  RLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVA 97

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A  ++ E+      P+   YN  I  + +   +D A   F  +   G++P+ V++  ++
Sbjct: 98  DALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMI 157

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LCK G LG+A +   ++ A+   ++         ++  Y   G    A  L   + ++
Sbjct: 158 WVLCKAGRLGEAEELFAQMEAE---RSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRER 214

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
                +V++N ++        +  A + F +++K+   P+  TYN +++ LC  G+++EA
Sbjct: 215 GCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEA 273

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                 +    + P+ ++   ++  LC    + +A +   S  ++   P+   +  +IDG
Sbjct: 274 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 333

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            G+ G +  A+ + + ML  G ++N   + +LI      G   D   + KE++  G  PD
Sbjct: 334 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPD 393

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           +   N  +      G +     +++++   G  PD+ +Y+ LI G    G  +E   +F 
Sbjct: 394 LTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFH 453

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            ++  G A+D   +  +   + +  +  KA +I ++
Sbjct: 454 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 489



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 138/296 (46%), Gaps = 7/296 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D R +  +I  L   G+      +   M Q+G   D   +N +V+  CK G + KA  ++
Sbjct: 428 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL 487

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM E    P  ATY A + G  +++ LD+A  LF    + GI  N V ++ L+    K 
Sbjct: 488 EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKV 547

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A   L E++       T +V T   L+D+  K  +  +AL  +  M +     + 
Sbjct: 548 GRIDEAYLILEEMMKKG---LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNT 604

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y++LING C     + AF ++  M K+G +P+V+TY T+++ L K G + +A   +  
Sbjct: 605 YTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 664

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               G  PD  S+  +I+G+      ++A +  +  L  S       WN ++   G
Sbjct: 665 FKANGGIPDAASFNALIEGMSNANRAMEAYQTTVYQLSSSSCS----WNFLVPDEG 716



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 140/299 (46%), Gaps = 7/299 (2%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G +PDV +++ L++ L K G   +  ++   M +   + +   YNA + G+C+  ++ KA
Sbjct: 424 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 483

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             +   M    ++P   T+  +V  L K   L +A     E  A   G   + V+ S+ L
Sbjct: 484 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE--AKSKGIELNVVLYSS-L 540

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D + K G   +A  +  +M +K +  ++  +N L++      +I+ A   F  M +   
Sbjct: 541 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 600

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            P+  TY+ L+N LC+  K ++A  F+  + K G+ P+ ++Y T+I GL   G+I  A  
Sbjct: 601 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYS 660

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
                     +P+   +N +I+G         A+        + +SS+  ++N L+  E
Sbjct: 661 LFERFKANGGIPDAASFNALIEGMSNANRAMEAYQT----TVYQLSSSSCSWNFLVPDE 715



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 6/159 (3%)

Query: 382 IVKAREFLLSMLEKSVV------PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           +V+AR    ++L  +V+      P    + V+I           A  +   M   G    
Sbjct: 20  LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 79

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           V  F  L+ A  R G + DA +L  E+    + PD+  YN+ I      G++ +A + + 
Sbjct: 80  VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFH 139

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           E+  +G+ PD ++YT +I   C  G + EAEE+FA+++ 
Sbjct: 140 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEA 178



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/208 (18%), Positives = 89/208 (42%)

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M +  F P    Y  L+  L +  + + A      + + G       + T+++ L   G 
Sbjct: 36  MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQ 95

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           +  A   +  +    + P+  ++NV ID +G+ G++  A      + + G+  +  ++ +
Sbjct: 96  VADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTS 155

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I    + G + +A  L  +M  +   P  + YN +I    + G    A +L + +  RG
Sbjct: 156 MIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 215

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVF 529
             P ++++  ++     +  + EA  +F
Sbjct: 216 CIPSVVSFNSILTCLGKKRKVDEALSLF 243


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 214/451 (47%), Gaps = 24/451 (5%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           ++M ++G  PD  T++ ++  LCK G+L+KA  ++ ++ E     N  TY+  I G C+ 
Sbjct: 62  QQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKA 121

Query: 202 NELDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSD 260
           + +D AL +F TM++ G   P+ VT N L+  LC    + +A   L E +A        +
Sbjct: 122 SRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAF-VLFEYMAK--AGCEPN 178

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           VI+ + L+D   K G   +A  LW +M +K+   D+VAY   + G C    ++ A     
Sbjct: 179 VISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCR 238

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGK-----------------LDEASHFYGVLSKTGVA 363
           +M+ +G   D + ++T++  LCK+G                  LDEA   +  +      
Sbjct: 239 KMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHP 298

Query: 364 PDQISYKTIIQGLCIHG---DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           P    + T+I  +C      D V   + + SM E    P    +N+++D   +   L  A
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEA 358

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + M ++G+S +V T++AL+    + G +  A  L +EM  +G+FPD FT   ++ A
Sbjct: 359 QELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNA 418

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
               G +  AL   + M  RG TPD++TY  L+ G C  G + EA    AK+       D
Sbjct: 419 LSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
              + I+     R  ++  A  I Q+ + R 
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 218/462 (47%), Gaps = 28/462 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++++ LC G ++  A  L   M + G  P+V++++ L++ LCK G L++A  +  EM E 
Sbjct: 149 SLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEK 208

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+   Y +F+TG C+ N + +A      M   G + + V  + ++  LCKKG   +A
Sbjct: 209 SCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEA 268

Query: 243 VKFLGEVLA-----DDDGKATSDVIT-----STILMDSYFKNGDKFQALALWNDMFQK-- 290
              + E L      D+  K   ++I+     S  L ++      K + L     +FQ+  
Sbjct: 269 QNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMK 328

Query: 291 ---------NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
                    N++T    YN++++  C    +  A     +M   G  PDV+TY+ L++ L
Sbjct: 329 SMKEFYCPPNLET----YNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGL 384

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK GKLD A      +SK GV PD  +  +I+  L   G +  A   L +M  +   P+ 
Sbjct: 385 CKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDL 444

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +N ++DG  + G +  A +    M++   + +VF++  +I A  R G    A ++ +E
Sbjct: 445 VTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQE 504

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           M+  G+ PD   Y+ L+      G   LAL+L    L +   PD + +  ++ G C  G 
Sbjct: 505 MVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK---PDFVMHKMVLDGLCKAGK 561

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            ++A EV  ++   G   D   +  +    R++ + DKAR +
Sbjct: 562 AEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQL 603



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 146/292 (50%), Gaps = 7/292 (2%)

Query: 135 GTALWLRRKMIQKGTVPDVL-THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA 193
           G  L+ R K +++   P  L T+N +V+ LCK   L++A  ++ EM+    SP+  TY+A
Sbjct: 320 GVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSA 379

Query: 194 FITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
            + G C++ +LD+A  L   M+  G+ P+  T   +++AL K G +  A+  L  + A  
Sbjct: 380 LVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARG 439

Query: 254 DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDIS 313
              +T D++T   L+D   K G   +A+     M       D+ +Y ++I   C +G  +
Sbjct: 440 ---STPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAA 496

Query: 314 SAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTII 373
            A A F +M+KRG LPD + Y++LL+ L + G  D A     +L  +   PD + +K ++
Sbjct: 497 GAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALE---LLKTSLCKPDFVMHKMVL 553

Query: 374 QGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            GLC  G    A E +  M +     +   +  ++ G  + G +  A  + D
Sbjct: 554 DGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVD 605



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 143/267 (53%), Gaps = 8/267 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++ +LC   ++  A  L  +M   G  PDV+T++ LV+ LCK+G L++A  ++ EMS+  
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEG 404

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T  + +    +  ++D AL    TM   G  P+ VT+N L+  LCK G + +A+
Sbjct: 405 VFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAI 464

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            FL +++A    K T DV + TI++ +  ++G    A A++ +M ++ +  D V Y+ L+
Sbjct: 465 TFLAKMVA---AKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLL 521

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFL-PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +G   NG    A     ++LK     PD + +  +L+ LCK GK ++A      ++  G 
Sbjct: 522 DGLARNGLEDLAL----ELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGF 577

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFL 389
             D  +Y +++ GL   G + KAR+ +
Sbjct: 578 PADAFTYISVVSGLRKLGKVDKARQLV 604



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 1/239 (0%)

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           QK  Q  +  YN  ++          A+  F QM +RG+ PD  TY+ +L  LCK G+LD
Sbjct: 31  QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE-KSVVPEPHIWNVI 407
           +A    G L ++GV  + I+Y  +I G C    +  A E   +M      VP+   +N +
Sbjct: 91  KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSL 150

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           + G      +S AF + + M   G   NV +++ L+    + G + +A  L +EM+    
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
            PD+  Y   +   C    +  A     +M+ +G   D + ++ +I   C +G+ +EA+
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 50/95 (52%)

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           VFTYN  + A        LA + + +M RRG  PD  TY+ +++G C  G + +A+E+  
Sbjct: 38  VFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLG 97

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           +++  G+ ++ I + ++     +    D A +I +
Sbjct: 98  QLRESGVKLNVITYSVVIDGCCKASRVDDALEIFK 132


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 219/465 (47%), Gaps = 10/465 (2%)

Query: 85  AVFNALDLI--LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRR 142
            +F AL +   L++    L  MR  G V      +   H+ +    C     G AL + R
Sbjct: 162 TIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFC-----GEALEVYR 216

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+ +G  P + T++ L+  L K  D E    +++EM ++   PN  T+   I    R  
Sbjct: 217 RMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           ++D+A  +F  M + G  P+ VT+ +L+ ALC  G L +A +   ++ A+  G     VI
Sbjct: 277 KIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKAN--GHKPDQVI 334

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             T L+D +   GD       W+ M       D+V + +L++  C   D   AFA F  M
Sbjct: 335 YIT-LLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVM 393

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            K+G LP++ TYNTL+  L + G++++A    G +   GV P   +Y   I      G+ 
Sbjct: 394 RKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGET 453

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA E    M  K +VP     N  +      G L  A ++ + +   G++ +  T+N +
Sbjct: 454 GKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMM 513

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +   ++ G + +A +L  EM+ +G  PDV   N LI +    G +  A Q++D M    +
Sbjct: 514 MKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKL 573

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +P ++TY  L+ G    G +++A E+F  +     + + I F  L
Sbjct: 574 SPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTL 618



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 211/431 (48%), Gaps = 3/431 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   ++ + + L + G +     +  KM + G V +  ++N L++ L + G   +A  V 
Sbjct: 156 DLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVY 215

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           R M      P+  TY+A +    +  + +  + L   M + G+RPN  T  I +  L + 
Sbjct: 216 RRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRA 275

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A +    +  DD+G    D++T T+L+D+    G    A  L+  M     + D 
Sbjct: 276 GKIDEAYEIFRRM--DDEG-CGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  L++ F   GD+ +   ++ QM   G++PDV+T+  L++ LCK    DEA   + V
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + K G+ P+  +Y T+I GL   G I  A + L +M    V P  + +N+ ID +G+ G+
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGE 452

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
              A    + M + G+  N+   NA + +    G + +A ++   +  +G+ PD  TYN+
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           ++     +G +  A+ L  EM+R G  PD+I    LI      G + EA ++F +++ + 
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572

Query: 537 LAIDHIPFRIL 547
           L+   + +  L
Sbjct: 573 LSPTVVTYNTL 583



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 198/452 (43%), Gaps = 29/452 (6%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           LK M D G     L  +       IR L   GKI  A  + R+M  +G  PD++T+  L+
Sbjct: 250 LKEMEDLG-----LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLI 304

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           + LC  G LE A  +  +M      P+   Y   +  +    +LD     +S M  +G  
Sbjct: 305 DALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYM 364

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI----------TSTILMDS 270
           P+ VT  ILV  LCK      A  F       D+  AT DV+          T   L+  
Sbjct: 365 PDVVTFTILVDVLCK------ARDF-------DEAFATFDVMRKQGILPNLHTYNTLICG 411

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             + G    AL L   M    +Q     YN+ I+ F  +G+   A   F +M  +G +P+
Sbjct: 412 LLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPN 471

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           ++  N  L  L + G+L EA   +  L + G+APD ++Y  +++     G + +A   L 
Sbjct: 472 IVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLS 531

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M+     P+  + N +ID   + G +  A+ + D M    +S  V T+N L+    + G
Sbjct: 532 EMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEG 591

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +  A  L + M+     P+  ++N L+   C    + LAL+++ +M      PD++TY 
Sbjct: 592 RVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYN 651

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            +I G      +  A   F +++   +  DH+
Sbjct: 652 TVIYGLIKENKVNHAFWFFHQLKK-SMHPDHV 682



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 186/361 (51%), Gaps = 4/361 (1%)

Query: 122  VAVIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
            + ++R LC   +   A  +  K  +K G  P + ++N L+ EL ++   EKA  + ++M 
Sbjct: 756  IPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMK 815

Query: 181  EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
             +  +P+  T+N  +  + +  ++ +   L+  M +   +P+ +T+NI++ +L K   L 
Sbjct: 816  NVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLD 875

Query: 241  DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
             A+ F  ++++ D         T   L+D   K G   +A+ L+ +M     + +   +N
Sbjct: 876  KALDFFYDLVSSDFRPTPR---TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932

Query: 301  VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +LING+   GD  +A   F +M+  G  PD+ +Y  L++CLC  G++DEA +++  L  T
Sbjct: 933  ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992

Query: 361  GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            G+ PD I+Y  II GL     + +A      M  + +VP+ + +N ++   G  G +  A
Sbjct: 993  GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052

Query: 421  FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
              + + +   G+  +VFT+NALI   +   +   A+++ K M++DG  P++ TY  L   
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPNQ 1112

Query: 481  S 481
            S
Sbjct: 1113 S 1113



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 202/457 (44%), Gaps = 10/457 (2%)

Query: 117  DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
            D   +  VI  L    K+  A W   ++ +K   PD +T   L+  L K G +  A  + 
Sbjct: 646  DVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIA 704

Query: 177  RE-MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
            R+ M ++R   N + +   + G     E+DKA+     +  NGI         LV  LCK
Sbjct: 705  RDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCK 764

Query: 236  KGLLGDAVKFLGEV---LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
                  A +   +    L      A+ + +   +L   Y +     +A  L+ DM     
Sbjct: 765  HKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTE-----KAWDLFKDMKNVGC 819

Query: 293  QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
              D   +N+L+     +G I+  F  + +M+ R   PD ITYN +++ L K   LD+A  
Sbjct: 820  APDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALD 879

Query: 353  FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            F+  L  +   P   +Y  +I GL   G + +A      M +    P   I+N++I+GYG
Sbjct: 880  FFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYG 939

Query: 413  RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
            + GD   A  +   M++ G+  ++ ++  L+      G + +A     E+   G+ PD  
Sbjct: 940  KIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFI 999

Query: 473  TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
             YN +I        +  AL LY+EM  RGI PD+ TY  L+      G +++A+ ++ ++
Sbjct: 1000 AYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEEL 1059

Query: 533  QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
            Q  GL  D   +  L + Y   +  + A  +++  ++
Sbjct: 1060 QLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMV 1096



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 160/329 (48%), Gaps = 5/329 (1%)

Query: 185  SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            SP  A+YN  I     V+  +KA  LF  M N G  P+  T N+L+    K G + +  +
Sbjct: 785  SPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFE 844

Query: 245  FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
               E+++    +   D IT  I++ S  K+ +  +AL  + D+   + +     Y  LI+
Sbjct: 845  LYKEMISR---RCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID 901

Query: 305  GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
            G    G +  A   F +M   G  P+   +N L+N   K G  + A   +  +   G+ P
Sbjct: 902  GLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRP 961

Query: 365  DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
            D  SY  ++  LC+ G + +A  +   +    + P+   +N II+G G+   +  A ++ 
Sbjct: 962  DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1021

Query: 425  DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI-GASCN 483
            + M + G+  +++T+N+L+L     G +  A  + +E+ L G+ PDVFTYN LI G S +
Sbjct: 1022 NEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLS 1081

Query: 484  LGHIHLALQLYDEMLRRGITPDIITYTEL 512
                H A  +Y  M+  G  P+I TY +L
Sbjct: 1082 ENPEH-AYTVYKNMMVDGCNPNIGTYAQL 1109



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 3/250 (1%)

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           D+++ F +   M K+    D+ TY T+   L  +G L + +     + K G   +  SY 
Sbjct: 140 DMAAVFEF---MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +I  L   G   +A E    M+ + + P    ++ ++   G+  D      +   M   
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+  NV+TF   I    R G I +A+ + + M  +G  PD+ TY +LI A CN G +  A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
            +L+ +M   G  PD + Y  L+      G++   +E +++++  G   D + F IL   
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376

Query: 551 YRRMKESDKA 560
             + ++ D+A
Sbjct: 377 LCKARDFDEA 386



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 1/272 (0%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNI-QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            M  + +  DK + +A   +  QK I + D+  Y  +     + G +        +M K 
Sbjct: 127 FMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKA 186

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           GF+ +  +YN L++ L + G   EA   Y  +   G+ P   +Y  ++  L    D    
Sbjct: 187 GFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMV 246

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
              L  M +  + P  + + + I   GR G +  A+ I   M   G   ++ T+  LI A
Sbjct: 247 MVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDA 306

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
               G + +A  L  +M  +G  PD   Y  L+    + G +    + + +M   G  PD
Sbjct: 307 LCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPD 366

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           ++T+T L+   C   +  EA   F  ++  G+
Sbjct: 367 VVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 5/131 (3%)

Query: 96   ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
            E L     ++ TG     L+ D+  +  +I  L    ++  AL L  +M  +G VPD+ T
Sbjct: 981  EALYYFNELKSTG-----LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYT 1035

Query: 156  HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
            +N L+  L   G +E+A  +  E+      P+  TYNA I GY      + A  ++  M 
Sbjct: 1036 YNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMM 1095

Query: 216  NNGIRPNRVTH 226
             +G  PN  T+
Sbjct: 1096 VDGCNPNIGTY 1106


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 225/459 (49%), Gaps = 8/459 (1%)

Query: 102 KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           + + D  P+R  + + +  + A+I   C  G++  AL ++  M Q G  PD  T+N L+ 
Sbjct: 304 RGLLDEMPLRGVVPSVWTYN-AMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIY 362

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP 221
            LC  G L++A+ ++        +P   T+   I GYC+   +D AL + S M ++  + 
Sbjct: 363 GLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKL 421

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           +   + +L++ L KK  L +A + L E+ A+  G A + VI ++I+ D Y K G    AL
Sbjct: 422 DLQAYGVLINVLIKKCRLKEAKETLNEMFAN--GLAPNVVIYTSII-DGYCKVGMVGAAL 478

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            ++  M  +    +   Y  LI G   +  +  A A   +M + G  P VI Y TL+   
Sbjct: 479 EVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQ 538

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK+ + D A   + ++ K G+ PD+ +Y  +   LC  G   +A  FL+    K VV   
Sbjct: 539 CKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---RKGVVLTK 595

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +  ++DG+ + G+   A  + + M++ G  ++++T++ L+ A  +   + +A S+  +
Sbjct: 596 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQ 655

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           M + G+  ++  Y ++I      G    A  L++EM+  G  P   TYT  I  +C  G 
Sbjct: 656 MTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQ 715

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           ++EAE +  +++  G+  D + + I       M   D+A
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRA 754



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 194/444 (43%), Gaps = 35/444 (7%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           LKE  + L  M   G     L  +   + ++I   C  G +G AL + + M  +G  P+ 
Sbjct: 439 LKEAKETLNEMFANG-----LAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNA 493

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T+  L+  L +   L KA  +I +M E   +P    Y   I G C+ +E D A  LF  
Sbjct: 494 WTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEM 553

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFL---GEVLADDDGKATSDVITSTILMDS 270
           M  NG+ P+   +N+L  ALCK G   +A  FL   G VL           +T T L+D 
Sbjct: 554 MEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTK---------VTYTSLVDG 604

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + K G+   A  L   M  +  + D+  Y+VL+   C    ++ A +   QM   G   +
Sbjct: 605 FSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCN 664

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           ++ Y  +++ + K+GK D A   +  +  +G  P   +Y   I   C  G I +A   + 
Sbjct: 665 IVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIG 724

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M    V P+   +++ I+G G  G +  AFS    M+      N +T+  L+L      
Sbjct: 725 EMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTY-WLLLKHFLKM 783

Query: 451 SIFDA-----------------FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
           S+ +A                 + L + M+  G+ P V TY+ +I   C    +  A  L
Sbjct: 784 SLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVL 843

Query: 494 YDEMLRRGITPDIITYTELIKGHC 517
            D ML + I+P+   YT LIK  C
Sbjct: 844 LDHMLGKAISPNEEIYTMLIKCCC 867



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 216/449 (48%), Gaps = 19/449 (4%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+ LC  G+I  A  L  +M  +G VP V T+N +++  CK G ++ A  +   M 
Sbjct: 287 YTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 346

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   +P+  TYN+ I G C   +LD+A  L +     G  P  +T   L++  CK   + 
Sbjct: 347 QNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA++    +++ +      D+    +L++   K     +A    N+MF   +  ++V Y 
Sbjct: 406 DALRVKSNMISSN---CKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYT 462

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I+G+C  G + +A   F  M   G  P+  TY +L+  L +  KL +A      + + 
Sbjct: 463 SIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQED 522

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREF-----LLSMLEKS-VVPEPHIWNVIIDGYGRC 414
           G+ P  I+Y T+IQG C      K  EF     L  M+EK+ + P+   +NV+ D   + 
Sbjct: 523 GITPGVIAYTTLIQGQC------KKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKS 576

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G    A+S    ++  GV     T+ +L+   ++ G+   A  L ++M+ +G   D++TY
Sbjct: 577 GRAEEAYS---FLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTY 633

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           ++L+ A C    ++ AL + D+M   G+  +I+ YT +I      G    A+ +F ++ +
Sbjct: 634 SVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMIS 693

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDI 563
            G       + +    Y ++ + ++A  +
Sbjct: 694 SGHKPSATTYTVFISSYCKIGQIEEAEHL 722



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 208/508 (40%), Gaps = 44/508 (8%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E +D ++ +R  G  R  L    + +   +R L           L   ++Q+G +PD 
Sbjct: 122 VREAVDAIQAIRRVGGKRLVLSP--KCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDT 179

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N ++   CK G L  A      + E     +  T NA + GYCR ++L KA  L   
Sbjct: 180 VTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMM 239

Query: 214 MANNGIRPNRVTHNILVHAL-----------------------------------CKKGL 238
           M   G R N  ++ IL+  L                                   CK+G 
Sbjct: 240 MPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGR 299

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           + DA   L E+           V T   ++D Y K+G    AL +   M Q     D   
Sbjct: 300 IHDARGLLDEMPLRG---VVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           YN LI G C  G +  A       + RGF P VIT+  L+N  CK  ++D+A      + 
Sbjct: 357 YNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
            +    D  +Y  +I  L     + +A+E L  M    + P   I+  IIDGY + G + 
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVG 475

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +  LM   G   N +T+ +LI    +   +  A +L  +M  DGI P V  Y  LI
Sbjct: 476 AALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLI 535

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C       A +L++ M + G+TPD   Y  L    C  G    AEE ++ +   G+ 
Sbjct: 536 QGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVRKGVV 592

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQK 566
           +  + +  L   + +   +D A  + +K
Sbjct: 593 LTKVTYTSLVDGFSKAGNTDFAAVLIEK 620



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 198/427 (46%), Gaps = 7/427 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL L   M+Q G   ++  +  L+  LCK G +  A  ++ EM      P+  TYNA I 
Sbjct: 268 ALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMID 327

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           GYC+   +  AL + + M  NG  P+  T+N L++ LC  G L +A + L   +A     
Sbjct: 328 GYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARG--- 383

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
            T  VIT T L++ Y K      AL + ++M   N + D+ AY VLIN       +  A 
Sbjct: 384 FTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAK 443

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M   G  P+V+ Y ++++  CK G +  A   + ++   G  P+  +Y ++I GL
Sbjct: 444 ETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGL 503

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
                + KA   +  M E  + P    +  +I G  +  +  NAF + ++M   G++ + 
Sbjct: 504 IQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDE 563

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
             +N L  A  + G   +A+S    ++  G+     TY  L+      G+   A  L ++
Sbjct: 564 QAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEK 620

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           M+  G   D+ TY+ L++  C +  + EA  +  ++   G+  + + + I+     +  +
Sbjct: 621 MVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGK 680

Query: 557 SDKARDI 563
            D A+ +
Sbjct: 681 HDHAKSL 687



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 116/253 (45%), Gaps = 1/253 (0%)

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           +  +++ G LPD +TYNT++   CK+G L  A  ++ +L ++G+  D  +   ++ G C 
Sbjct: 167 YSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCR 226

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
             D+ KA   L+ M         + + ++I G      +  A  +  +M+  G S N+  
Sbjct: 227 TSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHM 286

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +  LI    + G I DA  L  EM L G+ P V+TYN +I   C  G +  AL +   M 
Sbjct: 287 YTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 346

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
           + G  PD  TY  LI G C  G + EAEE+       G     I F  L   Y + +  D
Sbjct: 347 QNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405

Query: 559 KARDIHQKWLLRN 571
            A  +    +  N
Sbjct: 406 DALRVKSNMISSN 418



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 132/317 (41%), Gaps = 19/317 (5%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   +  +++ LC   K+  AL +  +M   G   +++ +  +++E+ K G  + A  
Sbjct: 627 KADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKS 686

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  EM      P+  TY  FI+ YC++ ++++A HL   M  +G+ P+ VT++I ++   
Sbjct: 687 LFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCG 746

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK----NGDKFQALALWN----- 285
             G +  A   L  ++   D     +  T  +L+  + K    N        +WN     
Sbjct: 747 HMGYMDRAFSTLKRMV---DASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELN 803

Query: 286 -------DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
                   M +  +   +V Y+ +I GFC    +  A      ML +   P+   Y  L+
Sbjct: 804 TVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLI 863

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
            C C      +   F   + + G  P   SY  +I GLC  GD  +A+     +L     
Sbjct: 864 KCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYN 923

Query: 399 PEPHIWNVIIDGYGRCG 415
                W ++ DG  + G
Sbjct: 924 HNEVAWKILNDGLLKAG 940



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 113/271 (41%), Gaps = 25/271 (9%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +   I   C  G+I  A  L  +M + G  PDV+T++  +N    +G +++A   ++ M 
Sbjct: 703 YTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMV 762

Query: 181 EMRPSPNCATYNAFITGYCRVN----------------ELDKALHLFSTMANNGIRPNRV 224
           +    PNC TY   +  + +++                EL+    L   M  +G+ P  V
Sbjct: 763 DASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVV 822

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATS---DVITSTILMDSYFKNGDKFQAL 281
           T++ ++   CK   L +A   L  +L    GKA S   ++ T  I      K   K   +
Sbjct: 823 TYSSIIAGFCKATRLEEACVLLDHML----GKAISPNEEIYTMLIKCCCDIKLFGK--DV 876

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
           +   DM +   Q  + +Y+ LI G C  GD   A + FC +L   +  + + +  L + L
Sbjct: 877 SFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGL 936

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
            K G +D  S     +       D  SY  +
Sbjct: 937 LKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967


>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 228/455 (50%), Gaps = 13/455 (2%)

Query: 82  NPQ-AVFNA-LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALW 139
           NP   +FN+ LD+++KE++D  +       +   +  D      +++ LCL  +IG A  
Sbjct: 43  NPSLKIFNSILDVLVKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFK 102

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L + M  +G  P+ + +N +++ LCK G + +A  ++ EM E    P+  T+N  I+ YC
Sbjct: 103 LLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE----PSDVTFNVLISAYC 158

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +   L +AL L     + G  P+ VT   +V  LCK G + + V+ L  V   +      
Sbjct: 159 QEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERV---ESMGGVV 215

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DV+    L+  +   G       +  DM  K    ++  YN+L +G+C +G + SA   F
Sbjct: 216 DVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLF 275

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT-GVAPDQIS-YKTIIQGLC 377
             M   G   + +TY+TL+  LC  G++++      ++ ++ G A  +IS Y +II GL 
Sbjct: 276 NDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLY 335

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
                 +A EFL  M  + + P     ++ I G+   G + +A  + D M+  G   +V 
Sbjct: 336 KKNQFEEALEFLTKM--EKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVL 393

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            +  LI    + G++ +AF L  EM+  G FP   T+N LI A C  G +  AL+L ++M
Sbjct: 394 VYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDM 453

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           + RG  PD+ +Y+ ++   C +G+ ++A  +F ++
Sbjct: 454 VGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQM 488



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 145/318 (45%), Gaps = 34/318 (10%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC  G++   + +  ++   G V DV+ +N L+   C +G  +    V+++M    
Sbjct: 188 VVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKG 247

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYN   +GYC    LD A+ LF+ M  +GI  N +T++ L+  LC  G + D  
Sbjct: 248 CLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGF 307

Query: 244 KFLGEVLADDDGKATSDVIT-STILMDSYFKN---------------------------- 274
           K L E++ +  G A   +   ++I+   Y KN                            
Sbjct: 308 KIL-ELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILG 366

Query: 275 ----GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
               G    A  +++ M ++     ++ Y  LI+GFC +G++  AF    +M+  G+ P 
Sbjct: 367 FCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPT 426

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
             T+N L++  C QGK+  A      +   G  PD  SY  ++  LC  GD  KA    L
Sbjct: 427 APTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFL 486

Query: 391 SMLEKSVVPEPHIWNVII 408
            M+EK ++P+   WN ++
Sbjct: 487 QMVEKDILPDYSTWNSML 504



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 192/433 (44%), Gaps = 50/433 (11%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G+ PD      +V  L +   + +   V+  +++   +P+   +N+ +    +  ++D A
Sbjct: 6   GSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVK-EDIDLA 64

Query: 208 LHLF-STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
              +   M  NG+  +  T  IL+  LC    +GDA K L   +    GK  + VI +T 
Sbjct: 65  REFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLL--QVMKSRGKTPNTVIYNT- 121

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           ++ +  KNG   +A +L N+M    ++   V +NVLI+ +C   ++  A     +    G
Sbjct: 122 MIHALCKNGKVGRARSLMNEM----VEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMG 177

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           F+PDV+T   ++  LCK G++ E       +   G   D ++Y T+I+G C+ G      
Sbjct: 178 FVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGH 237

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             L  M  K  +P    +N++  GY   G L +A  + + M + G++ N  T++ LI   
Sbjct: 238 RVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGL 297

Query: 447 TRGGSIFDAFSLKKEM-----------------------------------LLDGIFPDV 471
             GG + D F + + M                                    ++ +FP  
Sbjct: 298 CSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRA 357

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
              +L I   CN G I  A ++YD+M++ G  P ++ Y  LI G C  GN++EA E+  +
Sbjct: 358 VDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINE 417

Query: 532 IQTLGLAIDHIPF 544
           +      +DH  F
Sbjct: 418 M------VDHGYF 424



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 6/241 (2%)

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFY-GVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           K G  P +  +N++L+ L K+  +D A  FY   +   GV+ D  ++  +++GLC+   I
Sbjct: 39  KFGENPSLKIFNSILDVLVKE-DIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRI 97

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A + L  M  +   P   I+N +I    + G +  A S+ + M    V  +  TFN L
Sbjct: 98  GDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEM----VEPSDVTFNVL 153

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I A  +  ++  A  L ++    G  PDV T   ++G  C  G +   +++ + +   G 
Sbjct: 154 ISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGG 213

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             D++ Y  LIKG C  G  K    V   ++  G   +   + IL   Y      D A D
Sbjct: 214 VVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAID 273

Query: 563 I 563
           +
Sbjct: 274 L 274



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 12/264 (4%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK--GTV 150
           +L   +D    M+  G     +  ++  +  +IR LC GG++     +   M +   G  
Sbjct: 267 MLDSAIDLFNDMKTDG-----INWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAG 321

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
             +  +N ++  L K    E+A   + +M ++   P     +  I G+C    +  A  +
Sbjct: 322 GRISPYNSIIYGLYKKNQFEEALEFLTKMEKL--FPRAVDRSLRILGFCNEGSIGDAKRV 379

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           +  M   G  P+ + +  L+H  C+ G + +A + + E++   D        T   L+ +
Sbjct: 380 YDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMV---DHGYFPTAPTFNALISA 436

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           +   G    AL L  DM  +    D+ +Y+ +++  C  GD   A   F QM+++  LPD
Sbjct: 437 FCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPD 496

Query: 331 VITYNTLLNCLCKQGKLDEASHFY 354
             T+N++L CL ++    E  + +
Sbjct: 497 YSTWNSMLLCLTQETVWLEGDNLF 520



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 39/229 (17%)

Query: 358 SKTGVAPDQISYKTIIQGL----------------------------------CIHGDIV 383
           S  G  PD+  + TI++GL                                   +  DI 
Sbjct: 3   SSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDID 62

Query: 384 KAREFLL-SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            AREF    M+   V  + + + +++ G      + +AF +  +M S G + N   +N +
Sbjct: 63  LAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTM 122

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I A  + G +  A SL  EM    + P   T+N+LI A C   ++  AL L ++    G 
Sbjct: 123 IHALCKNGKVGRARSLMNEM----VEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGF 178

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            PD++T T+++   C  G + E  EV  +++++G  +D + +  L K +
Sbjct: 179 VPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGF 227


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 186/374 (49%), Gaps = 3/374 (0%)

Query: 143  KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
            KM++ G  P ++T   L+N  C+    ++A  ++  M      PN   YN  I G C+  
Sbjct: 664  KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 723

Query: 203  ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            +L+ AL +F  M   GIR + VT+N L+  L   G   DA + L +++     K   +VI
Sbjct: 724  DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR---KIDPNVI 780

Query: 263  TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
              T L+D++ K G+  +A  L+ +M ++++  ++  YN LINGFC++G +  A   F  M
Sbjct: 781  FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 840

Query: 323  LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            + +G  PDV+TYNTL+   CK  ++++    +  ++  G+  D  +Y T+I G C  G +
Sbjct: 841  VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 900

Query: 383  VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
              A++    M++  V P+   +N+++D     G +  A  + + +    +  ++ T+N +
Sbjct: 901  NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 960

Query: 443  ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
            I    R   + +A+ L + +   G+ PD   Y  +I   C  G    A +L   M   G 
Sbjct: 961  IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 1020

Query: 503  TPDIITYTELIKGH 516
             P    Y E ++ H
Sbjct: 1021 MPSERIYDETLRDH 1034



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 196/411 (47%), Gaps = 3/411 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A  L  +M+    +P ++    L+     +   E   +  ++M     S +  ++   I 
Sbjct: 55  AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            +CR + L  AL +   M   G  P+ VT   L+H  C    +GDA   +  +L    G 
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV--ILMVKSGY 172

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
             + V+ +T L+D   KNG+   AL L N+M +K +  D+V YN L+ G C +G  S A 
Sbjct: 173 EPNVVVYNT-LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
                M+KR   PDV+T+  L++   KQG LDEA   Y  + ++ V P+ ++Y +II GL
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C+HG +  A++    M  K   P    +N +I G+ +   +     +   M   G ++++
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           FT+N LI    + G +  A  +   M+   + PD+ T+ +L+   C  G I  AL  +D+
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           M        I+ Y  +I G C    +++A E+F ++   G+  D   + I+
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 208/423 (49%), Gaps = 8/423 (1%)

Query: 116  TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
             D+ R + VI  +    K    ++L  KM   G   D+ +   L++  C+   L  A  +
Sbjct: 605  VDFTRVLTVIAKM---NKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661

Query: 176  IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
            + +M ++   P+  T  + + G+C+ N   +A+ L  +M   G  PN V +N +++ LCK
Sbjct: 662  LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721

Query: 236  KGLLGDAVKFLGEVLADDDGKAT-SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
               L +A+    EV    + K   +D +T   L+     +G    A  L  DM ++ I  
Sbjct: 722  NRDLNNAL----EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 777

Query: 295  DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
            +++ +  LI+ F   G++  A   + +M++R  +P+V TYN+L+N  C  G L +A + +
Sbjct: 778  NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 837

Query: 355  GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             ++   G  PD ++Y T+I G C    +    +    M  + +V +   +N +I GY + 
Sbjct: 838  DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 897

Query: 415  GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
            G L+ A  + + M+  GVS ++ T+N L+      G I  A  + +++    +  D+ TY
Sbjct: 898  GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 957

Query: 475  NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
            N++I   C    +  A  L+  + R+G+ PD I Y  +I G C +G  +EA+++  +++ 
Sbjct: 958  NIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKE 1017

Query: 535  LGL 537
             G 
Sbjct: 1018 DGF 1020



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 214/409 (52%), Gaps = 12/409 (2%)

Query: 156 HNY---LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           H+Y   L NEL  I   + A  +  EM + RP P+   +   +T   ++N+ D  ++L+ 
Sbjct: 570 HHYRERLRNELHCI-KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYH 628

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M N GI  +  +  IL+H  C+   L  A+  LG+++    G   S V   ++L  + F
Sbjct: 629 KMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM--KLGFRPSIVTLGSLL--NGF 684

Query: 273 KNGDKFQ-ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
             G++FQ A++L + M       ++V YN +ING C N D+++A   F  M K+G   D 
Sbjct: 685 CQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADA 744

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TYNTL++ L   G+  +A+     + K  + P+ I +  +I      G++++AR     
Sbjct: 745 VTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKE 804

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M+ +SVVP    +N +I+G+   G L +A  + DLM+S G   +V T+N LI    +   
Sbjct: 805 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 864

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + D   L  EM   G+  D FTYN LI   C  G +++A ++++ M+  G++PDI+TY  
Sbjct: 865 VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 924

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKES 557
           L+   C  G +++A  +   +Q   + +D I + I+ +   R  ++KE+
Sbjct: 925 LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 973



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 176/359 (49%), Gaps = 7/359 (1%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
            E A  +  EM   +P P+   +   +T    +   +  ++    M   GI  +  +  I
Sbjct: 52  FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN--GDKFQALALWND 286
           L+H  C+   L  A+  LG+++    G   S V   ++L      N  GD F  + L   
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMM--KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL--- 166

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +   + ++V YN LI+G C NG+++ A     +M K+G   DV+TYNTLL  LC  G+
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
             +A+     + K  + PD +++  +I      G++ +A+E    M++ SV P    +N 
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           II+G    G L +A    DLM S G   NV T+N LI    +   + +   L + M  +G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
              D+FTYN LI   C +G + +AL ++  M+ R +TPDIIT+  L+ G C  G ++ A
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 181/379 (47%), Gaps = 3/379 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C   ++  AL +  KM++ G  P ++T   L++  C +  +  A  ++  M +  
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN   YN  I G C+  EL+ AL L + M   G+  + VT+N L+  LC  G   DA 
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L +++         DV+T T L+D + K G+  +A  L+ +M Q ++  + V YN +I
Sbjct: 232 RMLRDMMKRS---INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C++G +  A   F  M  +G  P+V+TYNTL++  CK   +DE    +  +S  G  
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D  +Y T+I G C  G +  A +    M+ + V P+     +++ G    G++ +A   
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M        +  +N +I    +   +  A+ L   + ++G+ PD  TY ++I   C 
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468

Query: 484 LGHIHLALQLYDEMLRRGI 502
            G    A +L   M   GI
Sbjct: 469 NGPRREADELIRRMKEEGI 487



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 208/437 (47%), Gaps = 16/437 (3%)

Query: 133  KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
            K   A  L  +M+Q   +P ++    ++  + K+   +   ++  +M  +  S +  ++ 
Sbjct: 584  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 193  AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
              I  +CR + L  AL L   M   G RP+ VT   L++  C+     +AV  +  +  D
Sbjct: 644  ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM--D 701

Query: 253  DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
              G   + VI +T++ +   KN D   AL ++  M +K I+ D V YN LI+G   +G  
Sbjct: 702  GFGFVPNVVIYNTVI-NGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 760

Query: 313  SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
            + A      M+KR   P+VI +  L++   K+G L EA + Y  + +  V P+  +Y ++
Sbjct: 761  TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 820

Query: 373  IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
            I G CIHG +  A+     M+ K   P+   +N +I G+ +   + +   +   M   G+
Sbjct: 821  INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 880

Query: 433  SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
              + FT+N LI    + G +  A  +   M+  G+ PD+ TYN+L+   CN G I  AL 
Sbjct: 881  VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 940

Query: 493  LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF-------- 544
            + +++ +  +  DIITY  +I+G C    +KEA  +F  +   G+  D I +        
Sbjct: 941  MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 1000

Query: 545  -----RILKKRYRRMKE 556
                 R   K  RRMKE
Sbjct: 1001 RKGLQREADKLCRRMKE 1017



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 211/484 (43%), Gaps = 53/484 (10%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           L+ L  M   G     L  D   +  ++  LC  G+   A  + R M+++   PDV+T  
Sbjct: 196 LELLNEMEKKG-----LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            L++   K G+L++A  + +EM +    PN  TYN+ I G C    L  A   F  MA+ 
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G  PN VT+N L+   CK  ++ + +K    +  +      +D+ T   L+  Y + G  
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG---FNADIFTYNTLIHGYCQVGKL 367

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             AL ++  M  + +  DI+ + +L++G C+NG+I SA   F  M +      ++ YN +
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           ++ LCK  K+++A   +  L   GV PD  +Y  +I GLC +G   +A E +  M E+ +
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487

Query: 398 VPEPHIWNVIIDGYGRCG-------------DLSNAFSIRDLM-LSFGVSSNVFTFNALI 443
           + + +  +  ++ +                   SN F ++ L+ ++F  S   F     +
Sbjct: 488 ICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRRHYL 547

Query: 444 LAETRGGS------------------------------IFDAFSLKKEMLLDGIFPDVFT 473
           L E RG +                                DAFSL  EML     P +  
Sbjct: 548 LLE-RGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVD 606

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +  ++     +    + + LY +M   GI+ D+ ++T LI   C    +  A  +  K+ 
Sbjct: 607 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 666

Query: 534 TLGL 537
            LG 
Sbjct: 667 KLGF 670



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 139/292 (47%), Gaps = 3/292 (1%)

Query: 114  LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            +  D   +  +I  L   G+   A  L R M+++   P+V+    L++   K G+L +A 
Sbjct: 740  IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 799

Query: 174  HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +EM      PN  TYN+ I G+C    L  A ++F  M + G  P+ VT+N L+   
Sbjct: 800  NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 859

Query: 234  CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            CK   + D +K   E+          D  T   L+  Y + G    A  ++N M    + 
Sbjct: 860  CKSKRVEDGMKLFCEMTYQG---LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 916

Query: 294  TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             DIV YN+L++  C NG I  A      + K     D+ITYN ++  LC+  KL EA   
Sbjct: 917  PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCL 976

Query: 354  YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
            +  L++ GV PD I+Y T+I GLC  G   +A +    M E   +P   I++
Sbjct: 977  FRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 1028



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 145/289 (50%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            + L++ M    I  D+ ++ +LI+ FC    +S A A   +M+K GF P ++T  +LLN
Sbjct: 623 VIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLN 682

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C+  +  EA      +   G  P+ + Y T+I GLC + D+  A E    M +K +  
Sbjct: 683 GFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRA 742

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   +N +I G    G  ++A  +   M+   +  NV  F ALI    + G++ +A +L 
Sbjct: 743 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 802

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           KEM+   + P+VFTYN LI   C  G +  A  ++D M+ +G  PD++TY  LI G C  
Sbjct: 803 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 862

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             +++  ++F ++   GL  D   +  L   Y +  + + A+ +  + +
Sbjct: 863 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 911



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 143/297 (48%), Gaps = 3/297 (1%)

Query: 272 FKNGDKFQ-ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK-RGFLP 329
           F +  +F+ A AL+ +M        IV +  L+     N        YF Q ++  G   
Sbjct: 46  FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTA-TANLRRYETVIYFSQKMELYGISH 104

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           D+ ++  L++C C+  +L  A    G + K G  P  +++ +++ G C+   I  A   +
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
           + M++    P   ++N +IDG  + G+L+ A  + + M   G+ ++V T+N L+      
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G   DA  + ++M+   I PDV T+  LI      G++  A +LY EM++  + P+ +TY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             +I G C  G + +A++ F  + + G   + + +  L   + + +  D+   + Q+
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 108/231 (46%)

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L  GF  +     AFA F +M+    LP ++ +  LL       + +   +F   +   G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           ++ D  S+  +I   C    +  A   L  M++    P    +  ++ G+     + +AF
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           S+  LM+  G   NV  +N LI    + G +  A  L  EM   G+  DV TYN L+   
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           C  G    A ++  +M++R I PD++T+T LI     +GN+ EA+E++ ++
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 52/113 (46%)

Query: 110  VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
            V C +  D   +  ++  LC  GKI  AL +   + +     D++T+N ++  LC+   L
Sbjct: 911  VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 970

Query: 170  EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
            ++A  + R ++     P+   Y   I+G CR     +A  L   M  +G  P+
Sbjct: 971  KEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 1023


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 203/423 (47%), Gaps = 2/423 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G++  A+ +   M + G  P++   N  ++ L    +L+KA      M  +  +PN  T
Sbjct: 294 AGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVT 353

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I GYC V+++D+A+ L   M + G  P++V++  ++  LC+   L +  + + ++ 
Sbjct: 354 YNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKM- 412

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
              D K   D +T   L+    K+G   +AL +  +  +   + D V Y+ +++ +C  G
Sbjct: 413 -QTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEG 471

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            I  A     +M  +G  PDV+TY ++L+  C+ GKLD+A      + K    P+ ++Y 
Sbjct: 472 KIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYT 531

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T + GLC +G  ++AR+ +    E+   P    ++V++ G  R G L+ A  +   M+  
Sbjct: 532 TFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGK 591

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G   N    N L+ +  R G   +A  L KE +  G   +V  +  +I   C    +  A
Sbjct: 592 GFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAA 651

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L L D+M      PD +TYT LI        ++EA E+  K+   GL    + +R +  +
Sbjct: 652 LSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQ 711

Query: 551 YRR 553
           Y R
Sbjct: 712 YCR 714



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 192/403 (47%), Gaps = 4/403 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
             I  L +G ++  AL    +M+  G  P+V+T+N L+   C +  +++A  +I +M   
Sbjct: 321 TAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSK 380

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTM-ANNGIRPNRVTHNILVHALCKKGLLGD 241
             SP+  +Y   +   CR   L++   L   M  ++ + P+ VT+N L+  L K G   +
Sbjct: 381 GCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDE 440

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A++ L E    +  +   D +  + ++ +Y K G   +A  L ++MF K    D+V Y  
Sbjct: 441 ALEILQEA---EKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTS 497

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +++GFC  G +  A     QM K    P+ +TY T LN LC+ GK  EA     +  +  
Sbjct: 498 VLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEW 557

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             P+ I+Y  ++ GL   G + +A + +  M+ K   P P   N+++    R G    A 
Sbjct: 558 WTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREAN 617

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +    ++ G + NV  F  +I    +   +  A SL  +M L    PD  TY  LI A 
Sbjct: 618 QLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDAL 677

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
                I  A +L  +MLR+G+ P  +TY  +I  +C +G +++
Sbjct: 678 AKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVED 720



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 209/439 (47%), Gaps = 22/439 (5%)

Query: 47  DNLP---CTLNDIMSY--VGDQCRSK----TRHWFSNKDSDNEGNPQAV-FNALDLILKE 96
           D +P   C+ + +  Y  +G  CR K     R       +D++  P  V +N+L  +L +
Sbjct: 375 DQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSK 434

Query: 97  NL---DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           +    + L+ +++   +R   + D   + A++   C  GKI  A  L  +M  KG  PDV
Sbjct: 435 HGHGDEALEILQEAEKLR--FKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDV 492

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+  +++  C+IG L++A  ++++M +    PN  TY  F+ G CR  +  +A  + + 
Sbjct: 493 VTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNM 552

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTILMDSYF 272
                  PN +T++++VH L ++G L +A   + E++    GK    + +   +L+ S  
Sbjct: 553 SEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMI----GKGFFPNPVEINLLVHSLC 608

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           ++G   +A  L  +   K    ++V +  +I+GFC   D+ +A +    M      PD +
Sbjct: 609 RDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTV 668

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TY  L++ L K  +++EA+     + + G+ P  ++Y+++I   C  G +    + L  M
Sbjct: 669 TYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKM 728

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           L KS       +N++I+   + G L  A S+   +L     ++  T + L+ +    G  
Sbjct: 729 LLKSRFQTA--YNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIP 786

Query: 453 FDAFSLKKEMLLDGIFPDV 471
             A+ +   M    + PD+
Sbjct: 787 MSAYKVACRMFNRNLIPDL 805



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 181/390 (46%), Gaps = 6/390 (1%)

Query: 128 LCLGGKIGTALWLRRKM-IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           LC   ++     L +KM      +PD +T+N L+  L K G  ++A  +++E  ++R   
Sbjct: 396 LCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKV 455

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           +   Y+A +  YC+  ++ KA  L S M + G  P+ VT+  ++   C+ G L  A K +
Sbjct: 456 DKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMM 515

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            ++          + +T T  ++   +NG   +A  + N   ++    + + Y+V+++G 
Sbjct: 516 QQMYKH---HCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGL 572

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
              G ++ A     +M+ +GF P+ +  N L++ LC+ GK  EA+         G A + 
Sbjct: 573 RREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNV 632

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           +++ T+I G C   D+  A   L  M   +  P+   +  +ID   +   +  A  +   
Sbjct: 633 VNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMK 692

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           ML  G+  +  T+ ++I    R G + D   L K+MLL   F     YNL+I   C  G+
Sbjct: 693 MLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSRFQT--AYNLVIEKLCKFGY 750

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGH 516
           +  A  L  E+LR     D  T   L++ +
Sbjct: 751 LEEANSLLGEVLRTASRTDAKTCHVLMESY 780



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 135/299 (45%), Gaps = 1/299 (0%)

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            +M SY + G    A+ +   M +  ++ ++   N  I+   +  ++  A  +  +M+  
Sbjct: 286 FVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLI 345

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  P+V+TYN L+   C   ++D+A      +   G +PD++SY T++  LC    + + 
Sbjct: 346 GIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEI 405

Query: 386 REFLLSMLEKS-VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           RE +  M   S ++P+   +N +I    + G    A  I           +   ++A++ 
Sbjct: 406 RELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVH 465

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A  + G I  A  L  EM   G  PDV TY  ++   C +G +  A ++  +M +    P
Sbjct: 466 AYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKP 525

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           + +TYT  + G C  G   EA ++    +      + I + ++    RR  + ++A D+
Sbjct: 526 NAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDV 584



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 115/250 (46%), Gaps = 7/250 (2%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M ++ IQ    A+  ++  +   G +  A      M K G  P++   NT ++ L    +
Sbjct: 272 MTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNE 331

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           L +A  F   +   G+AP+ ++Y  +I+G C    + +A E +  M  K   P+   +  
Sbjct: 332 LKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYT 391

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF----TFNALILAETRGGSIFDAFSLKKEM 462
           ++    R   L+    IR+L+      S +     T+N+LI   ++ G   +A  + +E 
Sbjct: 392 VMGLLCRDKRLN---EIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEA 448

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
                  D   Y+ ++ A C  G I  A +L  EM  +G  PD++TYT ++ G C  G +
Sbjct: 449 EKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKL 508

Query: 523 KEAEEVFAKI 532
            +A+++  ++
Sbjct: 509 DQAKKMMQQM 518



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 1/183 (0%)

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A+  L  M  + +   P  +  ++  Y R G L +A  +  LM   GV  N+   N  I 
Sbjct: 265 AKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIH 324

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
               G  +  A    + M+L GI P+V TYN LI   CN+  +  A++L D+M  +G +P
Sbjct: 325 ILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSP 384

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQT-LGLAIDHIPFRILKKRYRRMKESDKARDI 563
           D ++Y  ++   C    + E  E+  K+QT   L  DH+ +  L +   +    D+A +I
Sbjct: 385 DKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEI 444

Query: 564 HQK 566
            Q+
Sbjct: 445 LQE 447



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 108/227 (47%), Gaps = 5/227 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  GK   A  L ++ + KG   +V+    +++  C+  DLE A  ++ +M    
Sbjct: 603 LVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCN 662

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY A I    + + +++A  L   M   G+ P+ VT+  ++H  C+KG + D +
Sbjct: 663 KHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLL 722

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L ++L     +   +++   +    Y +     +A +L  ++ +   +TD    +VL+
Sbjct: 723 KLLKKMLLKSRFQTAYNLVIEKLCKFGYLE-----EANSLLGEVLRTASRTDAKTCHVLM 777

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             +   G   SA+   C+M  R  +PD+     +   L  +GKL+EA
Sbjct: 778 ESYLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEA 824


>gi|255570073|ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534731|gb|EEF36423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 557

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 216/443 (48%), Gaps = 11/443 (2%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K+   +++   ++ K  +P+V+T+   ++ LCK+GDL+      +EM +    PN   + 
Sbjct: 56  KMKEEVFIYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFT 115

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I GY ++  LD A  L+  M  +   PN  T+  L++  CK+G+L  A  F  ++L  
Sbjct: 116 CLIDGYSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKML-- 173

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
           + G   +  + ++I+ D +FK G+   A+  +++M +++ + DIVAY V+I+G   NG +
Sbjct: 174 EVGIMPNSTVYTSII-DGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRL 232

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
                    M++ G  PD +   TL++   K G    A   Y  L   G  PD ++  ++
Sbjct: 233 DKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSL 292

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I GLC  G    A+ +        V      +  +IDG  + G+L     +   M   G 
Sbjct: 293 IDGLCKDGRYHDAKGYFCKEKANEVS-----YTALIDGICKEGNLDEVERVVMEMSESGF 347

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             + F + + I    R G I +AF +K +M+ +GI  D+ TY+ LI    N G +  A Q
Sbjct: 348 VPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQ 407

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG-LAIDH--IPFRILKK 549
           L+D+ML+RGI PD + +  LI+G+  + N      +  +++  G L ID   I FR   +
Sbjct: 408 LFDDMLKRGIIPDSMVFDILIRGYLKQDNPVAISHLHEEMRRRGLLTIDKITISFRNQTE 467

Query: 550 RYRRMKESDKARDIHQKWLLRNK 572
            +   +ES   R     ++ R +
Sbjct: 468 EFVSKQESYVQRPCPSNYIKRKQ 490



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 209/453 (46%), Gaps = 34/453 (7%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G++PD++T+N L++  CK G +E+A   I+ +       +  ++NA   G+C+  ++ + 
Sbjct: 2   GSLPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCK-RKMKEE 60

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + ++  +      PN +T+   +  LCK G L    KF  E+  D       ++I  T L
Sbjct: 61  VFIYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDG---IVPNLIAFTCL 117

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D Y K G+   A  L+ DM +     ++  Y  LINGFC  G +  A  +F +ML+ G 
Sbjct: 118 IDGYSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGI 177

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +P+   Y ++++   K+G +D A  ++  + K     D ++Y  +I GL  +G + K  E
Sbjct: 178 MPNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLE 237

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            +  M+   + P+  +   ++  + + G+   A+ +   +L+ G   +  T ++LI    
Sbjct: 238 VMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLC 297

Query: 448 RGGSIFDA---FSLKK---------------------------EMLLDGIFPDVFTYNLL 477
           + G   DA   F  +K                           EM   G  PD F Y   
Sbjct: 298 KDGRYHDAKGYFCKEKANEVSYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSW 357

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I   C  G I  A ++ ++M+  GI  D++TY+ LI G   +G M EA+++F  +   G+
Sbjct: 358 IAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGI 417

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
             D + F IL + Y +         +H++   R
Sbjct: 418 IPDSMVFDILIRGYLKQDNPVAISHLHEEMRRR 450



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 190/385 (49%), Gaps = 9/385 (2%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I  LC  G + T     ++M + G VP+++    L++   KIG+L+ A  + ++M +   
Sbjct: 83  IDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYSKIGNLDFAYQLYKDMCKSMH 142

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            PN  TY A I G+C+   L++A   F  M   GI PN   +  ++    KKG +  A+K
Sbjct: 143 LPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMK 202

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
           +  E+  +       D++   +++     NG   + L +  DM +  +  D V    L++
Sbjct: 203 YFSEMRKES---FRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMH 259

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
                G+  +A+  + ++L RGF PD +T ++L++ LCK G+  +A  ++          
Sbjct: 260 AHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYF-----CKEKA 314

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           +++SY  +I G+C  G++ +    ++ M E   VP+  ++   I    R G +  AF ++
Sbjct: 315 NEVSYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVK 374

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           + M+  G+  ++ T+++LI      G + +A  L  +ML  GI PD   +++LI      
Sbjct: 375 NKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPDSMVFDILIRGYLKQ 434

Query: 485 GHIHLALQLYDEMLRRG-ITPDIIT 508
            +      L++EM RRG +T D IT
Sbjct: 435 DNPVAISHLHEEMRRRGLLTIDKIT 459



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 57/125 (45%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           C  + +   + A+I  +C  G +     +  +M + G VPD   +   + ELC+ G + +
Sbjct: 310 CKEKANEVSYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVE 369

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A  V  +M E     +  TY++ I G      + +A  LF  M   GI P+ +  +IL+ 
Sbjct: 370 AFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPDSMVFDILIR 429

Query: 232 ALCKK 236
              K+
Sbjct: 430 GYLKQ 434


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 178/371 (47%), Gaps = 6/371 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +++  G  P+    N L+ +L ++G+L  A +V  EM          ++N  I+G CR  
Sbjct: 230 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 289

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +LD A  L   M+  G+ P+  T+  L+  LC+ G + DA     ++          + +
Sbjct: 290 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG---MKPNAV 346

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             TIL+D++ K GD    L L  +M ++ ++ D V YN ++NG C   D+ SA     +M
Sbjct: 347 VFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEM 406

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
              G  PD +TY TL++  CK+ +LD A      +   GV  D+++Y  +I GL   G  
Sbjct: 407 RSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRS 466

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A   L  M+E  + P+   + ++ID + R GD+     +   M + G    V T+N +
Sbjct: 467 ADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVI 526

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +    + G + +A  L   M+  G+ PD  TYN+L+   C  G +    +L      +G 
Sbjct: 527 MNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSA---KGT 583

Query: 503 TPDIITYTELI 513
            PD+  YT ++
Sbjct: 584 VPDLGVYTSIV 594



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 173/356 (48%), Gaps = 6/356 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++RDL   G++ +A  +  +M  +G    V++ N +++ +C+ GDL+ A+ + R MSE  
Sbjct: 246 LMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAG 305

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+  TY A I G CRV  ++ A  +F  M   G++PN V   IL+ A CKKG   DA 
Sbjct: 306 VTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKG---DAE 362

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L       +     D +T   +++   +  D   A  +  +M    ++ D V Y  LI
Sbjct: 363 TMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLI 422

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+C   ++  A      M+  G   D +TY  L++ L K G+  +A    G + + G+ 
Sbjct: 423 DGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLE 482

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y  +I   C  GD+      L  M  K   P    +NVI++G+ + G + NA  +
Sbjct: 483 PDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADML 542

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
            + M++ GVS +  T+N L+    + G + D   LK      G  PD+  Y  ++G
Sbjct: 543 LNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSA---KGTVPDLGVYTSIVG 595



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 162/362 (44%), Gaps = 38/362 (10%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P    +N  +    R+ EL  A ++F  M + G+R   V+ N ++  +C+ G        
Sbjct: 238 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG-------- 289

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
                 D DG  T                        L   M +  +  D+  Y  LI G
Sbjct: 290 ------DLDGAET------------------------LHRRMSEAGVTPDVYTYGALIQG 319

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C  G I  A   F +M  RG  P+ + +  L++  CK+G  +     +  + + GV PD
Sbjct: 320 LCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPD 379

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++Y  I+ GLC   D+  A   ++ M    + P+   +  +IDGY +  +L  A  I+ 
Sbjct: 380 AVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQ 439

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M++ GV  +  T+ ALI   ++ G   DA  +  EM+  G+ PD  TY ++I A C  G
Sbjct: 440 NMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKG 499

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +   L+L  EM  +G  P ++TY  ++ G C  G MK A+ +   +  +G++ D I + 
Sbjct: 500 DVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYN 559

Query: 546 IL 547
           IL
Sbjct: 560 IL 561



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 143/292 (48%), Gaps = 6/292 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + A+I+ LC  G+I  A  +  KM  +G  P+ +    L++  CK GD E    + 
Sbjct: 309 DVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELH 368

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           REM E    P+  TYNA + G CR  +L  A  +   M + G+RP+ VT+  L+   CK+
Sbjct: 369 REMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKE 428

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             L  A++    ++A+  G    D +T T L+    K G    A  +  +M +  ++ D 
Sbjct: 429 EELDMAMEIKQNMVAEGVG---LDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDN 485

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y ++I+ FC  GD+ +      +M  +G  P V+TYN ++N  CK G++  A      
Sbjct: 486 TTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNA 545

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           +   GV+PD I+Y  ++ G C HG +    E   +   K  VP+  ++  I+
Sbjct: 546 MINIGVSPDDITYNILLDGHCKHGKVTDIEELKSA---KGTVPDLGVYTSIV 594



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 109/220 (49%)

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA  FY  L   G+ P+   +  +++ L   G++  A+     M  + V      +N +I
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
            G  R GDL  A ++   M   GV+ +V+T+ ALI    R G I DA  + ++M   G+ 
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P+   + +LI A C  G     L+L+ EM  RG+ PD +TY  ++ G C   ++K A  +
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             ++++ GL  D + +  L   Y + +E D A +I Q  +
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMV 442



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 8/172 (4%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MR  G     L  D   +  +I   C   ++  A+ +++ M+ +G   D +T+  L++ L
Sbjct: 406 MRSAG-----LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 460

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
            K G    A+ V+ EM E    P+  TY   I  +CR  ++   L L   M N G +P  
Sbjct: 461 SKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGV 520

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           VT+N++++  CK G + +A   L  ++   +   + D IT  IL+D + K+G
Sbjct: 521 VTYNVIMNGFCKLGQMKNADMLLNAMI---NIGVSPDDITYNILLDGHCKHG 569


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 194/404 (48%), Gaps = 5/404 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M ++G  PD   ++  +         E+A  ++  M+     P+  TY++ I    +V+
Sbjct: 176 RMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACAKVS 235

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
              +A+ L  +M   G++PN + ++  + A  K G    AV  L E+ A        DVI
Sbjct: 236 RWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVG---LAPDVI 292

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T + ++D+  K G    A  L  +M  K +  +I+ Y+++I      G    A A   +M
Sbjct: 293 TYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREM 352

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            + G  PDVITY++ ++   K+G+ +EA      +   GV P+ ISY  +I      G  
Sbjct: 353 QENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRW 412

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A + L  M    V P+   ++  ID   +      A  +   M + G++ NV ++N+ 
Sbjct: 413 REAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSA 472

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG-HIHLALQLYDEMLRRG 501
           I A  + G    A  L +EM   G+ PDV TY+ +I ASC +G     AL L+ EM R+G
Sbjct: 473 IDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVI-ASCAMGRQWEEALDLFREMQRQG 531

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           ITPD+++    I      G  +EA +V  ++ T+GL  D I +R
Sbjct: 532 ITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYR 575



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 207/452 (45%), Gaps = 10/452 (2%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           ++ LD L  M++ G     ++ D + + + I       +   A+ L   M  +GT PDVL
Sbjct: 168 RKALDVLDRMQEQG-----VKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVL 222

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++  +    K+   ++A  ++R M      PN   Y+A I+   +  + + A+ L   M
Sbjct: 223 TYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEM 282

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G+ P+ +T++ ++ A  K+G    A + L E+         +++IT +I++ +  K 
Sbjct: 283 PAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKG---VVANIITYSIVIGACAKW 339

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +A+AL  +M +  +  D++ Y+  I+     G    A     +M   G  P+ I+Y
Sbjct: 340 GQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISY 399

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
             +++   K+G+  EA      +   GV PD I+Y   I          +A   L  M  
Sbjct: 400 GIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPA 459

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             + P    +N  ID   + G    A  +   M + G++ +V T++A+I +   G    +
Sbjct: 460 TGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEE 519

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L +EM   GI PDV + N  I A    G    AL +  EM   G+ PD I+Y   I 
Sbjct: 520 ALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAID 579

Query: 515 GHCARGN-MKEAEEVFAKIQTLGLAIDHIPFR 545
             CA+G+  KE  ++  ++ T+GL  D I +R
Sbjct: 580 A-CAKGDRWKEIIDLLREMSTVGLTPDAISYR 610



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 200/446 (44%), Gaps = 8/446 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           KE +  L++M+  G     ++ +   + A I     GG+  TA+ L ++M   G  PDV+
Sbjct: 238 KEAVGLLRSMKGQG-----VKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVI 292

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++ +++   K G  E A  ++ EM       N  TY+  I    +  + ++A+ L   M
Sbjct: 293 TYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREM 352

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
             NG+ P+ +T++  + A  KKG   +AV  L E+  +     T + I+  I++ +  K 
Sbjct: 353 QENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEG---VTPNAISYGIVISACAKR 409

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +A+ L  +M    +  D++ Y+  I+          A     +M   G  P+VI+Y
Sbjct: 410 GRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISY 469

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N+ ++   K G+   A      +   G+APD I+Y  +I    +     +A +    M  
Sbjct: 470 NSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQR 529

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
           + + P+    N  I+   + G    A  +   M + G+  +  ++   I A  +G    +
Sbjct: 530 QGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKE 589

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
              L +EM   G+ PD  +Y   + A    G    AL L  +ML  G++PD++TY   I 
Sbjct: 590 IIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAIN 649

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAID 540
                G  KEA  +  ++ T GLA D
Sbjct: 650 ACAKGGRWKEATVLLRQMPTFGLAPD 675



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 176/384 (45%), Gaps = 5/384 (1%)

Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
           + E  + GD  KA  V+  M E    P+   Y++ I       + ++A+ L ++MA  G 
Sbjct: 158 LREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGT 217

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            P+ +T++  + A  K     +AV  L  +          +VI  +  + +  K G    
Sbjct: 218 PPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQG---VKPNVIVYSAAISACRKGGQWET 274

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A+ L  +M    +  D++ Y+ +I+     G    AF    +M  +G + ++ITY+ ++ 
Sbjct: 275 AVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIG 334

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
              K G+ +EA      + + GVAPD I+Y + I      G   +A   L  M  + V P
Sbjct: 335 ACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTP 394

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               + ++I    + G    A  +   M + GV  +V  ++A I A  +      A  L 
Sbjct: 395 NAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLL 454

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           +EM   G+ P+V +YN  I A    G   +A++L  EM   G+ PD+ITY+ +I   CA 
Sbjct: 455 REMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVI-ASCAM 513

Query: 520 G-NMKEAEEVFAKIQTLGLAIDHI 542
           G   +EA ++F ++Q  G+  D +
Sbjct: 514 GRQWEEALDLFREMQRQGITPDVV 537



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 205/462 (44%), Gaps = 10/462 (2%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           +D LK M   G     L  D   +  VI      G+   A  L  +M  KG V +++T++
Sbjct: 276 VDLLKEMPAVG-----LAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYS 330

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            ++    K G  E+A  ++REM E   +P+  TY++ I+   +  + ++A+ L   M   
Sbjct: 331 IVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPME 390

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G+ PN +++ I++ A  K+G   +A+  L E+ A        DVI  +  +D+  +    
Sbjct: 391 GVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHG---VPPDVINYSAAIDACAQASRW 447

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            QAL L  +M    +  ++++YN  I+     G    A     +M   G  PDVITY+ +
Sbjct: 448 EQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAV 507

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +       + +EA   +  + + G+ PD +S  T I      G   +A + L  M    +
Sbjct: 508 IASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGL 567

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           VP+   +   ID   +         +   M + G++ +  ++   + A +  G   +A  
Sbjct: 568 VPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALV 627

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L ++ML  G+ PDV TYN  I A    G    A  L  +M   G+ PD+ ++   I   C
Sbjct: 628 LLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDA-C 686

Query: 518 ARGNM-KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             G+    A EV  +++ LG++ +   +       +R  E D
Sbjct: 687 GNGDQWGTAVEVLFEMRALGVSPNEATYLTAMYACKRCGEKD 728



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 119/322 (36%), Gaps = 72/322 (22%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E +D L+ M+  G     +  D   + A I       +   ALWL R+M   G  P+V+
Sbjct: 413 REAIDLLQEMQAHG-----VPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVI 467

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           ++N  ++   K G  + A  ++REM     +P+  TY+A I       + ++AL LF  M
Sbjct: 468 SYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREM 527

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV----LADD--------DGKA----- 257
              GI P+ V+ N  ++A  + G   +A+  LGE+    L  D        D  A     
Sbjct: 528 QRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRW 587

Query: 258 ---------------TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                          T D I+    M +   +G   +AL L  DM    +  D+V YN  
Sbjct: 588 KEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSA 647

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDV------------------------------- 331
           IN     G    A     QM   G  PDV                               
Sbjct: 648 INACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGV 707

Query: 332 ----ITYNTLLNCLCKQGKLDE 349
                TY T +    + G+ D+
Sbjct: 708 SPNEATYLTAMYACKRCGEKDD 729



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 77/169 (45%)

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
           +GD  KA + L  M E+ V P+   ++  I   G       A  +   M + G   +V T
Sbjct: 164 YGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLT 223

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +++ I A  +     +A  L + M   G+ P+V  Y+  I A    G    A+ L  EM 
Sbjct: 224 YSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMP 283

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             G+ PD+ITY+ +I     RG  + A  +  ++ T G+  + I + I+
Sbjct: 284 AVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIV 332


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 212/442 (47%), Gaps = 2/442 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK+  A+     M + G  PD+   N  ++ L     L+KA   +  M  +   PN  T
Sbjct: 182 AGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVIT 241

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I GYC ++ L+ A  L + M   G  P+++++  ++  LCK+  + +    + ++L
Sbjct: 242 YNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKML 301

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
            D +     D +T    +    K+G   +AL    +  ++  + D V Y+ +++ FC  G
Sbjct: 302 KDSN--LLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREG 359

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A     +M  +G +PDV+TY +++N LC++ K+D+A      + K G  P+ +SY 
Sbjct: 360 RMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYT 419

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            ++ GLC +G+ ++ARE +    E   +P    ++V++ G+ R G  S A  +   M+  
Sbjct: 420 ALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKK 479

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G        N LI +  +   + +A    ++ L +G   +V  +  +I   C    +  A
Sbjct: 480 GFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAA 539

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
           L L D+M      PD++TYT +I     +G ++EA ++  K+  +G     + +R +  +
Sbjct: 540 LSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQ 599

Query: 551 YRRMKESDKARDIHQKWLLRNK 572
           Y RM   +    + +K L R +
Sbjct: 600 YCRMGRVEDLLKLLEKMLSRQE 621



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 191/411 (46%), Gaps = 4/411 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
             I  L +G ++  A+    +M      P+V+T+N L+   C +  LE A  +I EM   
Sbjct: 209 TAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFK 268

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTM-ANNGIRPNRVTHNILVHALCKKGLLGD 241
             SP+  +Y   +   C+   + +   L   M  ++ + P++VT+N  VH L K G   +
Sbjct: 269 GCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDE 328

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A++FL E    ++ +   D +  + ++ S+ + G   +A  + N+MF K    D+V Y  
Sbjct: 329 ALEFLREA---EERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTS 385

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +ING C    +  A     QM K G  P+ ++Y  LLN LCK G   EA     +  +  
Sbjct: 386 VINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXW 445

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             P+ I+Y  ++ G    G   +A + +  M++K   P P   N++I    +   +  A 
Sbjct: 446 WIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAK 505

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
              +  L+ G + NV  F  +I    +   +  A SL  +M L    PDV TY  +I A 
Sbjct: 506 RFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDAL 565

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
              G I  A +L  +MLR G  P  +TY  +I  +C  G +++  ++  K+
Sbjct: 566 GKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKM 616



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 193/445 (43%), Gaps = 41/445 (9%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           LC   +I     L  KM++   + PD +T+N  V+ L K G  ++A   +RE  E R   
Sbjct: 284 LCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV 343

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           +   Y+A +  +CR   +DKA  + + M + G  P+ VT+  +++ LC++  +  A K L
Sbjct: 344 DKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKML 403

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            ++          + ++ T L++   KNG+  +A  + N   +     + + Y+VL++GF
Sbjct: 404 RQMYKHG---CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGF 460

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
              G  S A     +M+K+GF P  +  N L+  LC++ K+DEA  F       G A + 
Sbjct: 461 RREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNV 520

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           +++ T+I G C   D+  A   L  M   +  P+   +  IID  G+ G +  A  +   
Sbjct: 521 VNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMK 580

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           ML  G      T+  +I    R G + D   L ++ML          YN +I   C+ G+
Sbjct: 581 MLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT--AYNQVIEKLCSFGN 638

Query: 487 IHLALQLYDEMLR-----------------------------------RGITPDIITYTE 511
           +  A +L  ++LR                                   R + PD+    +
Sbjct: 639 LEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEK 698

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLG 536
           + K     G  +EA+++  +    G
Sbjct: 699 VSKKLMLEGKSEEADKLILRFVERG 723



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 80/353 (22%), Positives = 166/353 (47%), Gaps = 9/353 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++   C  G++  A  +  +M  KG +PDV+T+  ++N LC+   +++A  ++R+M 
Sbjct: 348 YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMY 407

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  +Y A + G C+     +A  + +        PN +T+++L+H   ++G   
Sbjct: 408 KHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSS 467

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A   + E++         ++    +L+ S  +     +A              ++V + 
Sbjct: 468 EACDLVREMIKKGFFPTPVEI---NLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFT 524

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I+GFC   D+ +A +    M      PDV+TY T+++ L K+G+++EA+     + + 
Sbjct: 525 TVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRV 584

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP--HIWNVIIDGYGRCGDLS 418
           G  P  ++Y+T+I   C  G +    E LL +LEK +  +     +N +I+     G+L 
Sbjct: 585 GWIPTPVTYRTVIHQYCRMGRV----EDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLE 640

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            A+ +   +L      +  T + LI +    G    ++++   M    + PD+
Sbjct: 641 QAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDL 693



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 1/298 (0%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +M SY + G    A+     M +  I+ D+   N  I+   +   +  A  +  +M    
Sbjct: 175 VMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVE 234

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+VITYN L+   C   +L++A      +   G +PD+ISY T++  LC    I + R
Sbjct: 235 IXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELR 294

Query: 387 EFLLSMLEKS-VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
             +  ML+ S ++P+   +N  +    + G    A              +   ++A++ +
Sbjct: 295 LLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHS 354

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             R G +  A  +  EM   G  PDV TY  +I   C    +  A ++  +M + G  P+
Sbjct: 355 FCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPN 414

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            ++YT L+ G C  GN  EA E+    +      + I + +L   +RR  +S +A D+
Sbjct: 415 TVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDL 472



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/227 (22%), Positives = 99/227 (43%), Gaps = 5/227 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC   K+  A     + +  G   +V+    +++  C+  DLE A  ++ +M    
Sbjct: 491 LIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSN 550

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY   I    +   +++A  L   M   G  P  VT+  ++H  C+ G + D +
Sbjct: 551 KHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLL 610

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L ++L+  + +   + +   +   S+   G+  QA  L   + +   + D    ++LI
Sbjct: 611 KLLEKMLSRQECRTAYNQVIEKLC--SF---GNLEQAYKLLGKVLRTASKIDANTCHMLI 665

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             +   G    ++   C+M  R  +PD+     +   L  +GK +EA
Sbjct: 666 ESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEA 712



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 76/180 (42%)

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
           FY    +     D I Y  +++ L        A+  L  M ++ +   P  +  ++  Y 
Sbjct: 121 FYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYS 180

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           R G L NA     +M   G+  ++   N  I     G  +  A    + M +  I P+V 
Sbjct: 181 RAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVI 240

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TYN LI   C+L  +  A +L  EM  +G +PD I+Y  ++   C    +KE   +  K+
Sbjct: 241 TYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKM 300



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 65/145 (44%)

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +P ++  +++   +      A  +  LM    +      F  ++++ +R G + +A    
Sbjct: 133 DPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXL 192

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
             M   GI PD+   N  I        +  A++  + M    I P++ITY  LIKG+C  
Sbjct: 193 TMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDL 252

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPF 544
             +++A E+ A++   G + D I +
Sbjct: 253 HRLEDAXELIAEMPFKGCSPDKISY 277


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 217/476 (45%), Gaps = 20/476 (4%)

Query: 83  PQAVFNALDLILKEN--LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWL 140
           P    N L + L  +  L  ++++    PVR     +   +  +I   C  G +  A   
Sbjct: 42  PIRCLNTLLMALARHGMLSDMESLAARMPVR-----NLHTYTTLINAYCHAGDLPAAKRH 96

Query: 141 RRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCA----TYNAFIT 196
              +++ G  PD   +   V   C+ G    A  +   M    P   CA    TY A + 
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLM----PQRGCARTPFTYAALLQ 152

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C    + +A+ +F+ M  +G  P+   ++I+VH LC  G  G+AV  L + +    GK
Sbjct: 153 GLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAM----GK 208

Query: 257 A-TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
               +V     L+D Y   GD   A+ ++  M  K    ++  Y  LI GFC +G +  A
Sbjct: 209 GFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERA 268

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
              + +M++ G  P+V+TY TL+   C +G L+ A      +   G+AP++ +   +I  
Sbjct: 269 MVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDA 328

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
           LC HG I +A++FL S+++K +     I+  +ID   + G    A ++   +++ G   +
Sbjct: 329 LCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPD 388

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
              +++LI    R   + +A SL  +M+  G+  +   + +LI              + D
Sbjct: 389 AHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISD 448

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
            M   G+ PD++TYT  I+ +C  G M++AE +  ++   G+  +   +  L K Y
Sbjct: 449 RMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGY 504



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 185/417 (44%), Gaps = 39/417 (9%)

Query: 109 PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           P R    T +  + A+++ LC  G +  A+ +   M   G  PD   ++ +V+ LC  G 
Sbjct: 136 PQRGCARTPFT-YAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGR 194

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
             +A  ++ +       PN A YNA I GYC   +L+ A+ +F  M + G  PN  T+  
Sbjct: 195 AGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQ 254

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L+   CK G +                                       +A+ L++ M 
Sbjct: 255 LICGFCKSGKVE--------------------------------------RAMVLYSRMI 276

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           +  +  ++V Y  LI G C  G +  AF     M   G  P+  T   L++ LCK G+++
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIE 336

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA  F G L + G+  +Q+ Y ++I  LC  G    A   +  ++ +  VP+ H+++ +I
Sbjct: 337 EAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLI 396

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           DG  R   L  A S+ + M+  GV +N   F  LI    R         +   M   G+ 
Sbjct: 397 DGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVK 456

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           PDV TY + I + C  G +  A  +  +M+  G+ P++ TY  LIKG+   G + +A
Sbjct: 457 PDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQA 513



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 182/371 (49%), Gaps = 19/371 (5%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++  LC  G+ G A+ L    + KG VP+V  +N L++  C  GDLE A  + 
Sbjct: 178 DSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIF 237

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           + M      PN  TY   I G+C+  ++++A+ L+S M   G+ PN VT+  L+   C +
Sbjct: 238 KGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSE 297

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A + L  + A   G A ++  T  +L+D+  K+G   +A      + QK I+ + 
Sbjct: 298 GHLEHAFRLLHSMEA--CGLAPNE-WTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQ 354

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  +I+  C +G    A     +++  GF+PD   Y++L++ LC++ KL EA      
Sbjct: 355 VIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLND 414

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREF------LLS--MLEKSVVPEPHIWNVII 408
           + ++GV  + + +  +I            REF      ++S  M    V P+   + V I
Sbjct: 415 MIESGVQANAVPFTILIDK--------HLREFRSDSPKMISDRMAAAGVKPDVVTYTVFI 466

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
             Y + G + +A S+   M+  GV  N+ T+N LI      G +  AFS  K M+ +G  
Sbjct: 467 RSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCK 526

Query: 469 PDVFTYNLLIG 479
           P+  +Y +L+G
Sbjct: 527 PNDESYTVLLG 537



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 177/417 (42%), Gaps = 7/417 (1%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
           VP +   N L+  L + G L   + +   M    P  N  TY   I  YC   +L  A  
Sbjct: 40  VPPIRCLNTLLMALARHGMLSDMESLAARM----PVRNLHTYTTLINAYCHAGDLPAAKR 95

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
             S++   G+ P+   +   V   C+ GL   A +    +L    G A +   T   L+ 
Sbjct: 96  HLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLF--LLMPQRGCARTP-FTYAALLQ 152

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
                G   +A+A++  M+      D   Y+++++G C  G    A A     + +GF+P
Sbjct: 153 GLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVP 212

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           +V  YN L++  C  G L+ A   +  +   G  P+  +Y  +I G C  G + +A    
Sbjct: 213 NVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLY 272

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M+E  + P    +  +I G    G L +AF +   M + G++ N +T   LI A  + 
Sbjct: 273 SRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKH 332

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G I +A      ++  GI  +   Y  +I A C  G    A  L  +++  G  PD   Y
Sbjct: 333 GRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMY 392

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           + LI G C    + EA  +   +   G+  + +PF IL  ++ R   SD  + I  +
Sbjct: 393 SSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDR 449



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 113/487 (23%), Positives = 209/487 (42%), Gaps = 34/487 (6%)

Query: 85  AVFNAL--------DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGT 136
           AV+NAL        DL L   +D  K M+  G +      + R +  +I   C  GK+  
Sbjct: 215 AVYNALIDGYCSTGDLELA--IDIFKGMQSKGCL-----PNVRTYTQLICGFCKSGKVER 267

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ L  +MI+ G  P+V+T+  L+   C  G LE A  ++  M     +PN  T    I 
Sbjct: 268 AMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLID 327

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
             C+   +++A     ++   GI+ N+V +  ++ ALCK G    A   + +++ +    
Sbjct: 328 ALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEG--- 384

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D    + L+D   +     +A++L NDM +  +Q + V + +LI+         S  
Sbjct: 385 FVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPK 444

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M   G  PDV+TY   +   C+ G++++A      +   GV P+  +Y T+I+G 
Sbjct: 445 MISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGY 504

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVII-------DGYGRCGDLSNAFSIRDL--- 426
              G + +A   L +M++    P    + V++         +    D  + + I D+   
Sbjct: 505 ANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVL 564

Query: 427 ------MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
                 ++    SS  + ++  I   ++   + +A S    M    + P    Y  +I  
Sbjct: 565 EELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIEC 624

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
              +  +  AL+  D M++R   P + +Y  +I   C  G+   A+ +F  I +     D
Sbjct: 625 CYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRD 684

Query: 541 HIPFRIL 547
            I ++IL
Sbjct: 685 EIAWKIL 691



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 19/279 (6%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M   G  PDV+T+   +   C+ G +E A+ ++ +M +    PN  TYN  I GY  + 
Sbjct: 449 RMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLG 508

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG----LLGDAV--------KFLGEVL 250
            + +A      M +NG +PN  ++ +L+  L KK     L+ D++        K L E+L
Sbjct: 509 LVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELL 568

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKF----QALALWNDMFQKNIQTDIVAYNVLINGF 306
            +      S   +++ + D + +   K     +A +    M   N+      Y  +I   
Sbjct: 569 EEVIKLQCS---SASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECC 625

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
                +  A  +   M+KR +LP + +Y  ++  LC++G    A   +G +       D+
Sbjct: 626 YRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDE 685

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           I++K +I GL   G+       L  M E++  P   I++
Sbjct: 686 IAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYS 724


>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Vitis vinifera]
          Length = 848

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 207/450 (46%), Gaps = 3/450 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           RC  + D   + A+I      G+   A+ +   M++    P   T+N L+N     G+ +
Sbjct: 192 RC--KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 249

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A +V ++M+E    P+  T+N  ++ Y R N+  K L  F  M    IRP+  T NI++
Sbjct: 250 EALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVI 309

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           + L K G  G A+      + +   +   DV+T T ++  Y   G        +N M  +
Sbjct: 310 YCLVKLGQNGKAIDIFNS-MKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAE 368

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            ++ +IV+YN LI  +  +G    AF+ F ++ K GF PDV++Y +LLN   K GK ++A
Sbjct: 369 GLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKA 428

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
              + ++ +    P+ +SY  +I      G + +A E L  M    V P       ++  
Sbjct: 429 MKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAA 488

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            GRCG      S+       G+  N   +N+ I +    G    A SL + M    + PD
Sbjct: 489 CGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPD 548

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             TYN+LI   C +     AL   DEM+   I      Y+ +I  +  +G + EAE +F 
Sbjct: 549 PVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFT 608

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           K++ +G   D I +  +   Y   +  +KA
Sbjct: 609 KMKMVGCRPDVITYTAMIHAYDVAENWEKA 638



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 187/441 (42%), Gaps = 43/441 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMI-QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +IR++   G +  ++ + R M  QK        +N ++    +   +++A  +  EM + 
Sbjct: 132 LIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKW 191

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R  P+  TYNA I  + R  +   A+++   M    I P+R T+N L++A    G   +A
Sbjct: 192 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 251

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF------------------------ 278
           +    ++  +  G    D++T  I++ +Y K G+++                        
Sbjct: 252 LNVCKKMTENGVG---PDLVTHNIVLSAY-KRGNQYSKVLSYFELMKGTNIRPDTTTLNI 307

Query: 279 ------------QALALWNDMFQKNIQ--TDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
                       +A+ ++N M +K  +   D+V +  +I+ + + G I +    F  ML 
Sbjct: 308 VIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLA 367

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G  P++++YN L+      G   EA   +  + K G  PD +SY +++      G   K
Sbjct: 368 EGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEK 427

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A +    M      P    +N +ID YG  G L+ A  I   M   GV  N+ +   L+ 
Sbjct: 428 AMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLA 487

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A  R G      S+     L GI  +   YN  IG+  ++G    AL LY  M  + + P
Sbjct: 488 ACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKP 547

Query: 505 DIITYTELIKGHCARGNMKEA 525
           D +TY  LI G C      EA
Sbjct: 548 DPVTYNVLISGCCKMSKYGEA 568



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 192/413 (46%), Gaps = 12/413 (2%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCA---TYNAFITGYCRVNELDKALHLFSTMA 215
           L+ E+ +IG LE +  V R M   +    CA    YN  I  + R N +D+A  LF  M 
Sbjct: 132 LIREITQIGSLEHSVQVFRWMKNQKNY--CARNDIYNMMIRLHARHNIVDQARGLFFEMQ 189

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
               +P+  T+N L++A  + G    A+  + ++L      + S   T   L+++   +G
Sbjct: 190 KWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRS---TYNNLINACGSSG 246

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
           +  +AL +   M +  +  D+V +N++++ +      S   +YF  M      PD  T N
Sbjct: 247 NWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLN 306

Query: 336 TLLNCLCKQGKLDEASHFYGVLS--KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
            ++ CL K G+  +A   +  +   ++   PD +++ TII    + G I   +    +ML
Sbjct: 307 IVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTML 366

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            + + P    +N +I  Y   G    AFS+ + +   G   +V ++ +L+ A  + G   
Sbjct: 367 AEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPE 426

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A  + + M  +   P++ +YN LI A  + G +  A+++  EM R G+ P+I++   L+
Sbjct: 427 KAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLL 486

Query: 514 KGHCAR-GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
              C R G   + + V +  +  G+ ++   +      Y  + E DKA  +++
Sbjct: 487 AA-CGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYR 538



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 112/502 (22%), Positives = 209/502 (41%), Gaps = 48/502 (9%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           KE L+  K M + G     +  D   H  V+     G +    L     M      PD  
Sbjct: 249 KEALNVCKKMTENG-----VGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTT 303

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPS--PNCATYNAFITGYCRVNELDKALHLFS 212
           T N ++  L K+G   KA  +   M E R    P+  T+   I  Y    +++     F+
Sbjct: 304 TLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFN 363

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
           TM   G++PN V++N L+ A    G+  +A     E+  +       DV++ T L+++Y 
Sbjct: 364 TMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNG---FHPDVVSYTSLLNAYG 420

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K+G   +A+ ++  M + + + ++V+YN LI+ +   G ++ A     +M + G  P+++
Sbjct: 421 KSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIV 480

Query: 333 T-----------------------------------YNTLLNCLCKQGKLDEASHFYGVL 357
           +                                   YN+ +      G+ D+A   Y  +
Sbjct: 481 SICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAM 540

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
               V PD ++Y  +I G C      +A  FL  M++  +     +++ +I  Y + G +
Sbjct: 541 RTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQV 600

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
           + A S+   M   G   +V T+ A+I A     +   A +L  EM  D + PD    + L
Sbjct: 601 TEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSL 660

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           + A    G     L L + M  + I  +  ++ E++   C+   ++E  E+   I+ +  
Sbjct: 661 MRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSA-CSL--LREWREIIGLIKLMEP 717

Query: 538 AIDHIPFRILKKRYRRMKESDK 559
           +I  +   +L +    + +S K
Sbjct: 718 SISVVSIGLLNQLLHFLGKSGK 739



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 167/392 (42%), Gaps = 3/392 (0%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           + G  PDV+++  L+N   K G  EKA  V   M      PN  +YNA I  Y     L 
Sbjct: 402 KNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLT 461

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +A+ +   M  NG++PN V+   L+ A C  G  G  VK    + A +      +     
Sbjct: 462 EAVEILHEMERNGVQPNIVSICTLL-AAC--GRCGQKVKIKSVLSAAELRGIKLNTTAYN 518

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
             + SY   G+  +AL+L+  M  K ++ D V YNVLI+G C       A  +  +M+  
Sbjct: 519 SAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDL 578

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
                   Y++++    KQG++ EA   +  +   G  PD I+Y  +I    +  +  KA
Sbjct: 579 KIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKA 638

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
               L M    V P+    + ++  + + G  +    + + M    +  N  +F  ++ A
Sbjct: 639 SALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSA 698

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
            +      +   L K M        +   N L+      G I   ++L+ +++  G   +
Sbjct: 699 CSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEIN 758

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
             TY+ L+K   A GN ++  EV   ++  GL
Sbjct: 759 FYTYSILLKNLLAAGNWRKYIEVLQWMEEAGL 790


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 223/474 (47%), Gaps = 44/474 (9%)

Query: 129 CLGGK--IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           CLG K  +  AL L   M +K   P+  T+N +++ LC  G +E+A  ++ EM      P
Sbjct: 363 CLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFP 421

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N  T N  +   C+  +L++A  +F + +  G  P+ VT+  L+  L KKG + +A +  
Sbjct: 422 NLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLF 481

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            ++L   D    ++ +  T L+ ++F +G K     ++ ++ ++  + D+   N  ++  
Sbjct: 482 EKML---DAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCV 538

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
              G++      F  +   GFLPDV +Y+ L++ L K G+  E S+ +  + + G A D 
Sbjct: 539 FKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDA 598

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI------------------- 407
            +Y  ++ G C  G + KA E L  M EK V P    +  I                   
Sbjct: 599 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 658

Query: 408 ----------------IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
                           IDG+G+ G +  A+ I + M+  G++ NV+T+N+L+ A  +   
Sbjct: 659 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 718

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           I +A    + M      P+ +TY++LI   C +   + A   + +M ++G+ P+++TYT 
Sbjct: 719 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 778

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           +I G    GN+ +A  +F + +  G   D   F  L      M  +++A + +Q
Sbjct: 779 MISGLAKVGNITDAYSLFERFKANGGIPDAASFNAL---IEGMSNANRAMEAYQ 829



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 197/449 (43%), Gaps = 32/449 (7%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LCLGG++  A  +  +M      P++LT N +V+ LCK   LE+A  +    S+  
Sbjct: 394 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 453

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +P+C TY + I G  +  ++D+A  LF  M + G   N V +  L+      G   D  
Sbjct: 454 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 513

Query: 244 KFLGEVLAD----------------------DDGKAT----------SDVITSTILMDSY 271
           K   E++                        + G+             DV + +IL+   
Sbjct: 514 KIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 573

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K G   +   +++ M Q+    D  AYN +++GFC +G +  A+    +M ++   P V
Sbjct: 574 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 633

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            TY  +++ L K  +LDEA   +      G+  + + Y ++I G    G I +A   L  
Sbjct: 634 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 693

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M++K + P  + WN ++D   +  +++ A      M       N +T++ LI    R   
Sbjct: 694 MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 753

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
              AF   ++M   G+ P+V TY  +I     +G+I  A  L++     G  PD  ++  
Sbjct: 754 YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNA 813

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           LI+G        EA +VF + +  G  I+
Sbjct: 814 LIEGMSNANRAMEAYQVFEETRLRGCRIN 842



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/494 (23%), Positives = 220/494 (44%), Gaps = 37/494 (7%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   + ++I  LC  G++G A  L  +M  + +VP    +N ++      G  E A 
Sbjct: 280 LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAY 339

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++  + E    P+  ++N+ +T   +  ++D+AL LF  M  +   PN  T+NI++  L
Sbjct: 340 KLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDML 398

Query: 234 CKKGLLGDAVKFLGE--------------VLADDDGKA------------------TSDV 261
           C  G + +A + L E              ++ D   KA                    D 
Sbjct: 399 CLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDC 458

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T   L+D   K G   +A  L+  M       + V Y  LI  F ++G        F +
Sbjct: 459 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKE 518

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           +++RG  PD+   NT ++C+ K G++++    +  +   G  PD  SY  +I GL   G 
Sbjct: 519 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 578

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
             +      +M ++    +   +N ++DG+ + G +  A+ I + M    V   V T+ A
Sbjct: 579 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 638

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           ++    +   + +A+ L +E    GI  +V  Y+ LI     +G I  A  + +EM+++G
Sbjct: 639 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 698

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA- 560
           +TP++ T+  L+        + EA   F  ++ +    +   + IL     R+++ +KA 
Sbjct: 699 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 758

Query: 561 ---RDIHQKWLLRN 571
              +D+ ++ L+ N
Sbjct: 759 VFWQDMQKQGLVPN 772



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/506 (20%), Positives = 217/506 (42%), Gaps = 44/506 (8%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           L+ L+ M++ G      E        ++R L   G++  AL L  ++      PD++ +N
Sbjct: 199 LELLRQMQEVG-----YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYN 253

Query: 158 YLVN-----------------------------------ELCKIGDLEKADHVIREMSEM 182
             ++                                    LCK G L +A+ +  +M   
Sbjct: 254 VCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE 313

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R  P    YN  I GY      + A  L   +   G  P+ V+ N ++  L KK  + +A
Sbjct: 314 RSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEA 373

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +    EV+  D   A  +  T  I++D     G   +A  + ++M   ++  +++  N++
Sbjct: 374 LSLF-EVMKKD---AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIM 429

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++  C    +  A+  F    +RG  PD +TY +L++ L K+G++DEA   +  +   G 
Sbjct: 430 VDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH 489

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             + + Y ++I+   IHG      +    ++ +   P+  + N  +D   + G++     
Sbjct: 490 NANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRM 549

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I + + S+G   +V +++ LI   T+ G   +  ++   M   G   D   YN ++   C
Sbjct: 550 IFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFC 609

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +H A ++ +EM  + + P + TY  ++ G      + EA  +F + ++ G+ ++ +
Sbjct: 610 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 669

Query: 543 PFRILKKRYRRMKESDKARDIHQKWL 568
            +  L   + ++   D+A  I ++ +
Sbjct: 670 LYSSLIDGFGKVGRIDEAYLILEEMM 695



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/456 (20%), Positives = 199/456 (43%), Gaps = 4/456 (0%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R      +  +  +I  L    +   AL L R+M + G    V     LV  L + G + 
Sbjct: 172 RLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVA 231

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A  ++ E+      P+   YN  I  + +   +D A   F  +   G++P+ V++  ++
Sbjct: 232 DALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMI 291

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LCK G LG+A +   ++ A+   ++         ++  Y   G    A  L   + ++
Sbjct: 292 WVLCKAGRLGEAEELFAQMEAE---RSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRER 348

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
                +V++N ++        +  A + F +++K+   P+  TYN +++ LC  G+++EA
Sbjct: 349 GCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEA 407

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                 +    + P+ ++   ++  LC    + +A +   S  ++   P+   +  +IDG
Sbjct: 408 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 467

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
            G+ G +  A+ + + ML  G ++N   + +LI      G   D   + KE++  G  PD
Sbjct: 468 LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPD 527

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           +   N  +      G +     +++++   G  PD+ +Y+ LI G    G  +E   +F 
Sbjct: 528 LTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFH 587

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            ++  G A+D   +  +   + +  +  KA +I ++
Sbjct: 588 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 623



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 3/260 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D R +  +I  L   G+      +   M Q+G   D   +N +V+  CK G + KA  ++
Sbjct: 562 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL 621

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM E    P  ATY A + G  +++ LD+A  LF    + GI  N V ++ L+    K 
Sbjct: 622 EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKV 681

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A   L E++       T +V T   L+D+  K  +  +AL  +  M +     + 
Sbjct: 682 GRIDEAYLILEEMMKKG---LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNT 738

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y++LING C     + AF ++  M K+G +P+V+TY T+++ L K G + +A   +  
Sbjct: 739 YTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 798

Query: 357 LSKTGVAPDQISYKTIIQGL 376
               G  PD  S+  +I+G+
Sbjct: 799 FKANGGIPDAASFNALIEGM 818



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 8/166 (4%)

Query: 377 CIH--GDIVKAREFLLSMLEKSVV------PEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           C H    +V+AR    ++L  +V+      P    + V+I           A  +   M 
Sbjct: 147 CAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQ 206

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G    V  F  L+ A  R G + DA +L  E+    + PD+  YN+ I      G++ 
Sbjct: 207 EVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVD 266

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           +A + + E+  +G+ PD ++YT +I   C  G + EAEE+FA+++ 
Sbjct: 267 MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEA 312



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/208 (18%), Positives = 90/208 (43%)

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M +  F P    Y  L+  L +  + + A      + + G       + T+++ L   G 
Sbjct: 170 MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQ 229

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           +  A   +  +    + P+  ++NV ID +G+ G++  A+     + + G+  +  ++ +
Sbjct: 230 VADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTS 289

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I    + G + +A  L  +M  +   P  + YN +I    + G    A +L + +  RG
Sbjct: 290 MIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 349

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVF 529
             P ++++  ++     +  + EA  +F
Sbjct: 350 CIPSVVSFNSILTCLGKKRKVDEALSLF 377



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 1/129 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   K   A    + M ++G VP+V+T+  +++ L K+G++  A  +        
Sbjct: 744 LINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANG 803

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+ A++NA I G    N   +A  +F      G R N  +   L+ AL K   L  A 
Sbjct: 804 GIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAA 863

Query: 244 KFLGEVLAD 252
             +G VL +
Sbjct: 864 -IVGAVLRE 871


>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 962

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 231/561 (41%), Gaps = 65/561 (11%)

Query: 61  GDQCRSKTRHWFSNKDSDNEG----------NPQAVFNALDLILKENLDRLKTM------ 104
           GD       HW   +D    G          N QAV +A + I K +      M      
Sbjct: 264 GDDSVEYRSHWHEERDKARNGLRKVIETEPENWQAVVSAFERIKKPSRKEYGLMVNYYTR 323

Query: 105 -RDTGPVRCTLETDYRRHVA--------VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
             D    R T E    R +         +I    +G  +  AL   RKM ++G    ++T
Sbjct: 324 RGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVT 383

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           ++ LV+   K G+ E ADH  +E  E   S N   Y   I  YC+   +DKA  L   M 
Sbjct: 384 YSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREME 443

Query: 216 NNGI-RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
             GI  P  + H ++        ++GD  K L       +      VIT   L++ Y K 
Sbjct: 444 EEGIDAPIDIYHTMMDGYT----MVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKL 499

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +AL +  +M    I+ ++  Y++LINGF    D ++AFA F  ++K G  PDV+ Y
Sbjct: 500 GKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLY 559

Query: 335 NTLLNCLCKQGKLDEAS-----------------------------------HFYGVLSK 359
           N ++   C  GK+D A                                      + ++  
Sbjct: 560 NNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRM 619

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
           +G  P   +Y  +I GL     + KA + L  M    V P  H +  I+ GY   GD   
Sbjct: 620 SGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGK 679

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           AF+    +   G+  +V+T+ AL+ A  + G +  A ++ KEM    I  + F YN+LI 
Sbjct: 680 AFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILID 739

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                G I  A  L  +M R G+ PDI TYT  I      G+M+ A +   +++++G+  
Sbjct: 740 GWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKP 799

Query: 540 DHIPFRILKKRYRRMKESDKA 560
           +   +  L   + R    +KA
Sbjct: 800 NVKTYTTLINGWARASLPEKA 820



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 141/335 (42%), Gaps = 38/335 (11%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           +I+ G  PDV+ +N ++   C +G +++A   ++EM + R  P   T+   I G+ R  E
Sbjct: 547 LIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGE 606

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           + KAL +F  M  +G  P   T+N L+  L +K  +  A + L E               
Sbjct: 607 MKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDE--------------- 651

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
                                  M    +  +   Y  +++G+   GD   AF YF ++ 
Sbjct: 652 -----------------------MTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLR 688

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G   DV TY  LL   CK G++  A      +S   +  +   Y  +I G    GDI 
Sbjct: 689 DEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIW 748

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A + +  M  + V P+ H +   I+   + GD+  A    + M S GV  NV T+  LI
Sbjct: 749 EAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLI 808

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
               R      A S  +EM L G+ PD   Y+ L+
Sbjct: 809 NGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLM 843



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 3/258 (1%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R  + +I      G++  AL +   M   G +P V T+N L+  L +   +EKA+ ++ E
Sbjct: 592 RTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDE 651

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M+    SPN  TY   + GY  + +  KA   F+ + + G++ +  T+  L+ A CK G 
Sbjct: 652 MTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGR 711

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           +  A+    E+ A +  + T       IL+D + + GD ++A  L   M ++ +Q DI  
Sbjct: 712 MQSALAVTKEMSAQNIPRNT---FIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHT 768

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y   IN     GD+  A     +M   G  P+V TY TL+N   +    ++A   +  + 
Sbjct: 769 YTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMK 828

Query: 359 KTGVAPDQISYKTIIQGL 376
            +G+ PD+  Y  ++  L
Sbjct: 829 LSGLKPDRAVYHCLMTSL 846



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 134/298 (44%)

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           ++++ Y + GD  +A   +  M  + I+     Y  LI+ + +  D+  A +   +M + 
Sbjct: 316 LMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEE 375

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G    ++TY+ L++   K G  + A H++    +   + + I Y  II   C   ++ KA
Sbjct: 376 GIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKA 435

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
              +  M E+ +     I++ ++DGY   GD      + +     G++ +V T+  LI  
Sbjct: 436 EALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINL 495

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G +  A  + KEM   GI  ++ TY++LI     L     A  +++++++ GI PD
Sbjct: 496 YAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPD 555

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           ++ Y  +I   C  G M  A     ++Q          F  +   + R  E  KA D+
Sbjct: 556 VVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDV 613



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 60/116 (51%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G I  A  L ++M ++G  PD+ T+   +N   K GD+++A   I EM  +   PN  TY
Sbjct: 745 GDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTY 804

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
              I G+ R +  +KAL  F  M  +G++P+R  ++ L+ +L  +  +     + G
Sbjct: 805 TTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRATVAHGCIYPG 860



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 71/146 (48%), Gaps = 5/146 (3%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           +RD G     L+ D   + A+++  C  G++ +AL + ++M  +    +   +N L++  
Sbjct: 687 LRDEG-----LQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGW 741

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
            + GD+ +A  ++++M      P+  TY +FI    +  ++ +A      M + G++PN 
Sbjct: 742 ARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNV 801

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEV 249
            T+  L++   +  L   A+    E+
Sbjct: 802 KTYTTLINGWARASLPEKALSCFEEM 827


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 198/427 (46%), Gaps = 3/427 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE        +I  LC+ G +G A+ L   + + G   DV T+  L+N LCK+G   +A 
Sbjct: 142 LEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAV 201

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             +R+M E   +PN   Y+  + G C+   + +AL L   M+  GI+PN VT+  L+  L
Sbjct: 202 GWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGL 261

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C  G   +A   L E++         D+ +  IL+D   K G   QA ++   M      
Sbjct: 262 CNFGRWKEAGSLLDEMMKMG---VMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEV 318

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+  YN LI+ +CL   +  A   F  M+ RG LPD++ Y +L++  CK   +++A H 
Sbjct: 319 PDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHL 378

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + K G  PD +++ T+I G C  G  + A+E  L+M +   VP      +I+DG  +
Sbjct: 379 LDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCK 438

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              LS A S+   M    +  N+  ++ ++      G +  A  L   +   G+  +V+ 
Sbjct: 439 SQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYA 498

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y ++I      G +  A  L   M   G  PD  TY   ++G  A   +  + +    ++
Sbjct: 499 YTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMR 558

Query: 534 TLGLAID 540
             G ++D
Sbjct: 559 DKGFSVD 565



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 214/478 (44%), Gaps = 42/478 (8%)

Query: 125 IRDLCLGGK---IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM-S 180
           +R+ C  GK   I  AL     M +   +P V+    L+  + K+     A  +++EM S
Sbjct: 44  MRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHS 103

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            +   P+    N  I   C +  +     +  TM   G+ P+ VT  IL++ LC KG +G
Sbjct: 104 SLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVG 163

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            AV+ +  V   +     SDV T  +L++   K G   +A+     M ++N   ++V Y+
Sbjct: 164 RAVELVDHV---EKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYS 220

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +++G C +G +S A     +M  +G  P+++TY  L+  LC  G+  EA      + K 
Sbjct: 221 TVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKM 280

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GV PD  S   ++  LC  G I++A+  +  M+    VP+   +N +ID Y     +  A
Sbjct: 281 GVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEA 340

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + +LM+S G   ++  + +LI    +  +I  A  L  EM+  G  PDV T+  LIG 
Sbjct: 341 TRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGG 400

Query: 481 SCNLGHIHLALQLYDEMLRRGITP-----------------------------------D 505
            C +G    A +L+  M + G  P                                   +
Sbjct: 401 FCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLN 460

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           I+ Y+ ++ G C+ G +  A E+F+ +   GL I+   + I+   + +    DKA D+
Sbjct: 461 IVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDL 518



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 183/411 (44%), Gaps = 43/411 (10%)

Query: 157 NYLVNELCKIGDLEKADHVI---REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           N++ N+ CK G L+  D  +     M++M P P+   +   +    ++     A+ L   
Sbjct: 42  NFMRNQ-CKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKE 100

Query: 214 MANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
           M ++ GI+P+    N+++++LC   L+      LG                         
Sbjct: 101 MHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLG------------------------- 135

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
                         M +  ++  +V + +LING C+ GD+  A      + K G+  DV 
Sbjct: 136 -------------TMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVK 182

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TY  L+N LCK GK  EA  +   + +    P+ + Y T++ GLC  G + +A    L M
Sbjct: 183 TYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEM 242

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
             K + P    +  +I G    G    A S+ D M+  GV  ++ + N L+    + G I
Sbjct: 243 SGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKI 302

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             A S+   M+L G  PDVFTYN LI   C    +  A ++++ M+ RG  PDI+ YT L
Sbjct: 303 MQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSL 362

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           I G C   N+ +A  +  ++  +G   D + +  L   + ++     A+++
Sbjct: 363 IHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKEL 413



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 165/342 (48%), Gaps = 5/342 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+ LC  G+   A  L  +M++ G +PD+ + N LV+ LCK G + +A  VI  M 
Sbjct: 254 YTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMI 313

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            +   P+  TYN+ I  YC  N++D+A  +F  M + G  P+ V +  L+H  CK   + 
Sbjct: 314 LVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNIN 373

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A+  L E++       T DV+T T L+  + + G    A  L+ +M +     ++    
Sbjct: 374 KAMHLLDEMIKVG---FTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCA 430

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           ++++G C +  +S A + F  M K     +++ Y+ +L+ +C  GKL+ A   +  L   
Sbjct: 431 IILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAK 490

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+  +  +Y  +I G    G + KA + L +M E   +P+   +NV + G     +++ +
Sbjct: 491 GLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARS 550

Query: 421 FSIRDLMLSFGVSSNVFTFNALI--LAETRGGSIFDAFSLKK 460
                +M   G S +  T   +I  L+  +G +    F   K
Sbjct: 551 IKYLTMMRDKGFSVDATTTEMIINYLSTNQGDNELREFLFPK 592



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 131/293 (44%), Gaps = 1/293 (0%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR-GFLPDVITYNTL 337
           +AL  ++ M + N    ++ + +L+         ++A +   +M    G  PD    N +
Sbjct: 58  EALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVV 117

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +N LC    +       G + K G+ P  +++  +I GLC+ GD+ +A E +  + +   
Sbjct: 118 INSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGY 177

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
             +   + V+I+G  + G  S A      M     + NV  ++ ++    + G + +A  
Sbjct: 178 RSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALG 237

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L  EM   GI P++ TY  LI   CN G    A  L DEM++ G+ PD+ +   L+   C
Sbjct: 238 LCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLC 297

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
             G + +A+ V   +  +G   D   +  L  RY    + D+A  + +  + R
Sbjct: 298 KEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSR 350


>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
          Length = 674

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 206/445 (46%), Gaps = 32/445 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AVI      G +  A    ++M   G  PD  T+N LV+ +C+ G +++A  ++++M   
Sbjct: 185 AVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERA 244

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY   + G+C  + +++A+ +   M   G+     T+  LVH   +      A
Sbjct: 245 GIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERA 304

Query: 243 VKFLGEVLADD--------------------DGKATS------------DVITSTILMDS 270
            + L E +  D                    D +A                 T +I++  
Sbjct: 305 YRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPC 364

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K  +      L +D  +K        Y ++I  F    DIS A  YF QM+  G L  
Sbjct: 365 AVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSS 424

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V +YN +++C  K G+++ A     V+ ++G +P+ +++ T+I G    G++  A+ FL 
Sbjct: 425 VESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLK 484

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            ++E  ++P+   +  +IDG      L +AF+    M  +GV  NV T+N LI      G
Sbjct: 485 MVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAG 544

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +  A  L  +M +DGI PD +++N  I + C +  I  A +L+++M R G++PD  TY 
Sbjct: 545 HVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYN 604

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTL 535
            LIK  C    + EA+E+   ++++
Sbjct: 605 ALIKALCDERRVDEAKEIILAMESI 629



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 200/435 (45%), Gaps = 6/435 (1%)

Query: 132 GKIGTALWLRRKMIQK---GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           G++G A +     +Q    G  P    +N ++    + G ++ A    ++M      P+C
Sbjct: 156 GRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDC 215

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN  + G CR   +D+AL L   M   GIRPN VT+ +LV   C    + +AV  L E
Sbjct: 216 FTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVL-E 274

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
            + +    AT     S  L+   F+  +K +A  + ++  + +     +AY+ L+     
Sbjct: 275 RMKEKGVSATEATYRS--LVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSK 332

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           N     A     +M KRG+L    T++ ++ C  K  +  +         K G       
Sbjct: 333 NDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDM 392

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  II+      DI KA ++   M+   ++     +N++ID + + G++  A     +M 
Sbjct: 393 YIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQ 452

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G S N+ TFN LI    + G++ DA +  K ++  G+ PDV T+  LI   C+   + 
Sbjct: 453 ESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLD 512

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A   + EM   G+ P++ TY  LI G C+ G++ +A E+  K++  G+  D   F    
Sbjct: 513 DAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPI 572

Query: 549 KRYRRMKESDKARDI 563
             + RM++ +KA+ +
Sbjct: 573 LSFCRMRKIEKAQKL 587



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 84/162 (51%)

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +++ +GR G    A  +   +   G+  +   +NA+I A  R G++  A+   ++M  DG
Sbjct: 151 LVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADG 210

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             PD FTYN L+   C  G +  AL+L  +M R GI P+++TYT L+ G C    ++EA 
Sbjct: 211 CRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAV 270

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            V  +++  G++     +R L     R  E ++A  +  +W+
Sbjct: 271 CVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWI 312



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/294 (20%), Positives = 133/294 (45%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L++S+ + G    A  ++  + +  ++     YN +I      G + +A+  F QM   G
Sbjct: 151 LVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADG 210

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PD  TYNTL++ +C++G +DEA      + + G+ P+ ++Y  ++ G C    + +A 
Sbjct: 211 CRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAV 270

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             L  M EK V      +  ++ G  RC +   A+ +    +    + +   ++ L+   
Sbjct: 271 CVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCL 330

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
           ++     +A  L K+M   G      T++++I  +  +       +L D+ +++G     
Sbjct: 331 SKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGF 390

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
             Y  +IK      ++ +A + F+++ + GL      + I+   + +  E ++A
Sbjct: 391 DMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERA 444


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 138/532 (25%), Positives = 240/532 (45%), Gaps = 74/532 (13%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
            K M+D G     L  + R +  +I  L   G+   A  L   + ++G VPDV T+N L+
Sbjct: 415 FKEMKDRG-----LVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLI 469

Query: 161 NELCKIGDLEKADHVIREMSEM-------RPS-----------------PNCA------- 189
           + L K G ++K   +I+EM E        R S                 P+         
Sbjct: 470 DVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEI 529

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           TYN  ++ +     +D+A+ L   M  +   P  VT+  LV  L K G L +AV  L E+
Sbjct: 530 TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM 589

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
              +       V+T + LM S++K   + ++L+L+++M +K    D+  Y+++IN  C +
Sbjct: 590 ---EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKS 646

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
            D+  A   F +M + G  P +  Y TLL+ L K  K+D A   +  L ++ + PD   Y
Sbjct: 647 DDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVY 706

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             ++ GL     + +A + + SM  ++++P+   +  ++DG G+ G L  AF++   M  
Sbjct: 707 NIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTE 766

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI----------- 478
            G   +V  + +L+    +GG +  A  + + M      PDV TY+ LI           
Sbjct: 767 EGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEE 826

Query: 479 -----------GASCNLG-------------HIHLALQLYDEMLRRGITPDIITYTELIK 514
                      G + N+G              +  AL+L++EM RR   P+I+TY  L+ 
Sbjct: 827 AYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLS 886

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           G    G +  AE++  +++ +G   D + + IL     +M   D+A    ++
Sbjct: 887 GLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKR 938



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 206/413 (49%), Gaps = 3/413 (0%)

Query: 137  ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            +L L  +M++KG V DV T++ ++N LCK  D+++A  V   M E    P    Y   ++
Sbjct: 617  SLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLS 676

Query: 197  GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
               +  ++D AL +F+ +  + + P+   +NI+V+ L K   + +A K +  +    +  
Sbjct: 677  SLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSM---KNQN 733

Query: 257  ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
               D+ T T L+D   K+G   +A  ++  M ++  + D+VAY  L++     G +S A 
Sbjct: 734  ILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHAL 793

Query: 317  AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
              F  M K+  +PDV+TY++L++ L K+G+++EA +F+      G  P+   Y ++I   
Sbjct: 794  IIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSF 853

Query: 377  CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
               G + +A E    M  +   P    +N ++ G  + G L+ A  + + M   G   ++
Sbjct: 854  GKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDL 913

Query: 437  FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
             T+N LI    + G + +A S  K M   GI PDV T+  LI +   +  +  A +L+D 
Sbjct: 914  VTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDS 973

Query: 497  MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
            M   G  P ++TY  LI      G + EA  +F +++  G   D I   I+K+
Sbjct: 974  MEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKR 1026



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 211/448 (47%), Gaps = 32/448 (7%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A+ L   M +   +P V+T+  LV+ L K G L++A  ++REM +    P+  TY
Sbjct: 542 GHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTY 601

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK---------------- 235
           ++ +  + + ++ +++L LF  M   G   +  T++++++ LCK                
Sbjct: 602 SSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKE 661

Query: 236 ---KGLLGDAVKFLGEVLADD-------------DGKATSDVITSTILMDSYFKNGDKFQ 279
              + LLG+    L  ++ D+             +     D     I+++   K+    +
Sbjct: 662 EGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDE 721

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  L + M  +NI  D+  Y  L++G   +G +  AF  F +M + G  PDV+ Y +L++
Sbjct: 722 ACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMD 781

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            L K GKL  A   +  ++K    PD ++Y ++I  L   G + +A  F  + + K   P
Sbjct: 782 VLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTP 841

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
              +++ +ID +G+ G +  A  + + M       N+ T+N L+    + G +  A  L 
Sbjct: 842 NVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLL 901

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           +EM   G  PD+ TYN+LI     +G +  A   +  M  +GI PD+IT+T LI+     
Sbjct: 902 EEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKV 961

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             + EA E+F  ++  G     + + +L
Sbjct: 962 DKLLEACELFDSMEEEGYNPSVVTYNVL 989



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 188/399 (47%), Gaps = 3/399 (0%)

Query: 110  VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
            VR     D   +  VI  LC    +  AL +  +M ++G  P +  +  L++ L K   +
Sbjct: 625  VRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKI 684

Query: 170  EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            + A  +  E+ E    P+   YN  + G  + N +D+A  L  +M N  I P+  T+  L
Sbjct: 685  DFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSL 744

Query: 230  VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
            +  L K G L +A     ++  +       DV+  T LMD   K G    AL ++  M +
Sbjct: 745  LDGLGKSGRLEEAFNMFTKMTEEGH---EPDVVAYTSLMDVLGKGGKLSHALIIFRAMAK 801

Query: 290  KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
            K    D+V Y+ LI+     G +  A+ +F   + +G  P+V  Y++L++   K+G +D 
Sbjct: 802  KRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDR 861

Query: 350  ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
            A   +  + +    P+ ++Y  ++ GL   G +  A + L  M +   VP+   +N++ID
Sbjct: 862  ALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILID 921

Query: 410  GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
            G G+ G +  A S    M   G+  +V TF +LI +  +   + +A  L   M  +G  P
Sbjct: 922  GVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNP 981

Query: 470  DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
             V TYN+LI      G +H A  ++ EM  +G  PD IT
Sbjct: 982  SVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGIT 1020



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 186/428 (43%), Gaps = 34/428 (7%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+V+T+  LVN L K G LE+A  V  EM E   SP+   YN  I G  +  E D A  L
Sbjct: 355 PNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGL 414

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M + G+ PN  T+NI++  L K G   +A +   ++    +  A  DV T   L+D 
Sbjct: 415 FKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDL---KEQGAVPDVFTYNTLIDV 471

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDI-------------------------------VAY 299
             K G   + LA+  +M +K  +  I                               + Y
Sbjct: 472 LGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITY 531

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N L++ F  NG +  A      M K   +P V+TY TL++ L K G+LDEA      + K
Sbjct: 532 NTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEK 591

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G  P  ++Y +++          ++      M+ K  V +   ++++I+   +  D+  
Sbjct: 592 QGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQ 651

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +   M   G+   +  +  L+ +  +   I  A  +  E+    + PD F YN+++ 
Sbjct: 652 ALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVN 711

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                  +  A +L D M  + I PD+ TYT L+ G    G ++EA  +F K+   G   
Sbjct: 712 GLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEP 771

Query: 540 DHIPFRIL 547
           D + +  L
Sbjct: 772 DVVAYTSL 779



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 200/446 (44%), Gaps = 34/446 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++R       +  AL +  +M   G  P    +N+++  L K G    A  V  ++ + 
Sbjct: 222 SLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQF 281

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R  P+  T+  F+  + R   LD A      M  +GI P   T  +L+ AL K G + +A
Sbjct: 282 RIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEA 341

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            KF   +    + + + +V+T T L++   K G   +A  ++ +M + N   D +AYN L
Sbjct: 342 CKFFNGM---KNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTL 398

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G    G+   A   F +M  RG +P++ TYN +++ L K G+  EA   +  L + G 
Sbjct: 399 IDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGA 458

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS----------------------VVPE 400
            PD  +Y T+I  L   G + K    +  M+EK                        V  
Sbjct: 459 VPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEY 518

Query: 401 PHI---------WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           P +         +N ++  +   G +  A  + ++M        V T+  L+    + G 
Sbjct: 519 PSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGR 578

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + +A SL +EM   G  P V TY+ L+ +         +L L+DEM+R+G   D+ TY+ 
Sbjct: 579 LDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSL 638

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGL 537
           +I   C   ++ +A +VF +++  G+
Sbjct: 639 VINCLCKSDDVDQALDVFGRMKEEGM 664



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 203/468 (43%), Gaps = 34/468 (7%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  L  GG   +A+ +  K+ Q    PD  T    V+   + G L+ A   I+EM +  
Sbjct: 258 VLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSG 317

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P   T+   I    +   +D+A   F+ M N    PN VT+  LV+ L K G L +A 
Sbjct: 318 IDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEAC 377

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E+    +   + D I    L+D   K G+   A  L+ +M  + +  ++  YN++I
Sbjct: 378 EVFVEM---KENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMI 434

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG-- 361
           +     G    A+  F  + ++G +PDV TYNTL++ L K G++D+       + + G  
Sbjct: 435 SVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGE 494

Query: 362 --VAPD---------------------------QISYKTIIQGLCIHGDIVKAREFLLSM 392
             ++ D                           +I+Y T++     +G + +A + L  M
Sbjct: 495 CIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVM 554

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
            +   +P    +  ++DG G+ G L  A S+   M   G   +V T+++L+ +  +    
Sbjct: 555 KKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQE 614

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            ++ SL  EM+  G   DV TY+L+I   C    +  AL ++  M   G+ P +  Y  L
Sbjct: 615 EESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTL 674

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           +        +  A ++F ++Q   L  D   + I+     +    D+A
Sbjct: 675 LSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEA 722



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 141/317 (44%), Gaps = 3/317 (0%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           S    TY   I       E D  + + + M   G R +      L+        +  A++
Sbjct: 179 SHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALE 238

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
              ++ +     +T+       +++   K G    A+ ++  + Q  IQ D   + + ++
Sbjct: 239 IFNQMKSFGCNPSTN---MYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVH 295

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
            F  +G +  A     +M+K G  P V T+  L++ L K G +DEA  F+  +     +P
Sbjct: 296 SFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSP 355

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           + ++Y T++ GL   G + +A E  + M E +  P+   +N +IDG G+ G+   A  + 
Sbjct: 356 NVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLF 415

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
             M   G+  N+ T+N +I    + G   +A+ L  ++   G  PDVFTYN LI      
Sbjct: 416 KEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKG 475

Query: 485 GHIHLALQLYDEMLRRG 501
           G +   L +  EM+ +G
Sbjct: 476 GQMDKVLAIIKEMVEKG 492



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 106/246 (43%)

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L+  F    ++S A   F QM   G  P    YN +L  L K G    A   +G L +  
Sbjct: 223 LLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFR 282

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD  +++  +      G +  A E +  M++  + P  H + V+ID   + G++  A 
Sbjct: 283 IQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEAC 342

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
              + M +   S NV T+  L+    + G + +A  +  EM  +   PD   YN LI   
Sbjct: 343 KFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGL 402

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
              G   +A  L+ EM  RG+ P++ TY  +I      G   EA ++F  ++  G   D 
Sbjct: 403 GKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDV 462

Query: 542 IPFRIL 547
             +  L
Sbjct: 463 FTYNTL 468



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 101/235 (42%)

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G+   V TY  ++  L    + D        + K G         ++++      ++  A
Sbjct: 177 GYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGA 236

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E    M      P  +++N +++   + G   +A  +   +  F +  +  TF   + +
Sbjct: 237 LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHS 296

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             R G +  A    +EM+  GI P V T+ +LI A    G+I  A + ++ M     +P+
Sbjct: 297 FNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPN 356

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           ++TYT L+ G    G ++EA EVF +++    + D I +  L     +  E+D A
Sbjct: 357 VVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMA 411



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%)

Query: 132  GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
            G +  A    ++M +KG VPDV+T   L+  L K+  L +A  +   M E   +P+  TY
Sbjct: 927  GMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTY 986

Query: 192  NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            N  I    R  ++ +A  +F  M   G  P+ +T  I+   L
Sbjct: 987  NVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRIL 1028


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 194/407 (47%), Gaps = 19/407 (4%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+  G V + +  +     LC  G  +KA  +I EM      P+ +TY+  I   C  +
Sbjct: 408 EMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDAS 467

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +++KA  LF  M  NGI P+  T+ IL+ + CK GL+  A  +  E+L D+    T +V+
Sbjct: 468 KVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDN---CTPNVV 524

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T T L+ +Y K    F A  L+  M  +  + ++V Y  LI+G C  G I  A   + +M
Sbjct: 525 TYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARM 584

Query: 323 --------LKRGF--------LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
                   +   F         P++ITY  L++ LCK  +++EA      +S  G  P+Q
Sbjct: 585 QGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQ 644

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           I Y  +I G C  G +  A+E  + M E+   P  + ++ +I+   +   L     +   
Sbjct: 645 IVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSK 704

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           ML    + NV  +  +I    + G   +A+ L  +M   G +P+V TY  +I     +G 
Sbjct: 705 MLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGK 764

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           I   L+LY +M  +G  P+ ITY  LI   C+ G + EA  +  +++
Sbjct: 765 IEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMK 811



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 186/428 (43%), Gaps = 22/428 (5%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  G+ G AL L  K   +  VPD + +N +V+ LC+    ++A  ++  M  +   PN
Sbjct: 250 LCKAGRCGDALSLLEK---EEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPN 306

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY   ++G     +L +   + S M   G  PNR   N LVHA CK      A K   
Sbjct: 307 VVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFK 366

Query: 248 EVL--ADDDGKATSDVITSTILMDSYFKNGDKFQ-ALALWNDMFQKNIQTDIVAYNVLIN 304
           +++      G    ++   +I  +      D  + A   +++M    +  + V  +    
Sbjct: 367 KMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFAR 426

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
             C  G    AF   C+M+ +GF+PD  TY+ ++  LC   K+++A   +  + K G+ P
Sbjct: 427 CLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVP 486

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
              +Y  +I   C  G I +AR +   ML  +  P    +  +I  Y +   + +A  + 
Sbjct: 487 SVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLF 546

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML-------LDGIF--------- 468
           ++ML  G   NV T+ ALI    + G I  A  +   M        +D  F         
Sbjct: 547 EMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCET 606

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P++ TY  L+   C    +  A +L D M   G  P+ I Y  LI G C  G ++ A+EV
Sbjct: 607 PNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEV 666

Query: 529 FAKIQTLG 536
           F K+   G
Sbjct: 667 FVKMSERG 674



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 179/399 (44%), Gaps = 22/399 (5%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI  LC   K+  A  L  +M + G VP V T+  L++  CK G +++A +  
Sbjct: 452 DDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWF 511

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM     +PN  TY + I  Y +  ++  A  LF  M   G +PN VT+  L+   CK 
Sbjct: 512 DEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKA 571

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G +  A +    +  D +   +SD+       D YFK  D        ND    NI    
Sbjct: 572 GQIDKACQIYARMQGDIE---SSDI-------DMYFKLDD--------NDCETPNI---- 609

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + Y  L++G C    +  A      M   G  P+ I Y+ L++  CK GKL+ A   +  
Sbjct: 610 ITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVK 669

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +S+ G  P+  +Y ++I  L     +    + L  MLE S  P   I+  +IDG  + G 
Sbjct: 670 MSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGK 729

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
              A+ +   M   G   NV T+ A+I    + G I     L ++M   G  P+  TY +
Sbjct: 730 TEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRV 789

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           LI   C+ G +  A +L DEM +      I +Y ++I+G
Sbjct: 790 LINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEG 828



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 204/447 (45%), Gaps = 25/447 (5%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL------EKADHVI 176
           +++   C       A  L +KMI+ G  P  L +N  +  +C   +L      E A+   
Sbjct: 347 SLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAY 406

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM ++    N    + F    C   + DKA  +   M + G  P+  T++ ++  LC  
Sbjct: 407 SEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDA 466

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             +  A     E+    +G   S V T TIL+DS+ K G   QA   +++M + N   ++
Sbjct: 467 SKVEKAFLLFEEM--KKNGIVPS-VYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNV 523

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY-- 354
           V Y  LI+ +     +  A   F  ML  G  P+V+TY  L++  CK G++D+A   Y  
Sbjct: 524 VTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYAR 583

Query: 355 --GVLSKTGV------------APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
             G +  + +             P+ I+Y  ++ GLC    + +A E L +M      P 
Sbjct: 584 MQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPN 643

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
             +++ +IDG+ + G L NA  +   M   G   N++T+++LI +  +   +     +  
Sbjct: 644 QIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLS 703

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           +ML +   P+V  Y  +I   C +G    A +L  +M   G  P++ITYT +I G    G
Sbjct: 704 KMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIG 763

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +++  E++  + + G A + I +R+L
Sbjct: 764 KIEQCLELYRDMCSKGCAPNFITYRVL 790



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/497 (23%), Positives = 226/497 (45%), Gaps = 34/497 (6%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLG-GKIGTALWLRRKMIQKGTVP 151
           + +E +D L  MR    +   +   YR    ++   CLG G++G    +   M+ +G  P
Sbjct: 287 LFQEAMDILDRMRSISCIPNVV--TYR----ILLSGCLGKGQLGRCKRILSMMMTEGCYP 340

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL------D 205
           +    N LV+  CK  D   A  + ++M +    P    YN FI   C   EL      +
Sbjct: 341 NREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLE 400

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
            A   +S M + G+  N+V  +     LC  G    A + + E+++   G    D   S 
Sbjct: 401 LAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSK--GFVPDDSTYSK 458

Query: 266 ILMDSYFKNGDKFQ-ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           ++   +  +  K + A  L+ +M +  I   +  Y +LI+ FC  G I  A  +F +ML+
Sbjct: 459 VI--GFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLR 516

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
               P+V+TY +L++   K  K+ +A+  + ++   G  P+ ++Y  +I G C  G I K
Sbjct: 517 DNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDK 576

Query: 385 AREFLLSM--------------LEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLML 428
           A +    M              L+ +    P+I  +  ++DG  +   +  A  + D M 
Sbjct: 577 ACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMS 636

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G   N   ++ALI    + G + +A  +  +M   G  P+++TY+ LI +      + 
Sbjct: 637 VNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLD 696

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
           L L++  +ML    TP+++ YT++I G C  G  +EA  +  K++ +G   + I +  + 
Sbjct: 697 LVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMI 756

Query: 549 KRYRRMKESDKARDIHQ 565
             + ++ + ++  ++++
Sbjct: 757 DGFGKIGKIEQCLELYR 773



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 122/497 (24%), Positives = 201/497 (40%), Gaps = 57/497 (11%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS--- 180
           +I+  C  G    AL    ++   G      T+N L+    +   L+ A  V REMS   
Sbjct: 176 LIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSG 235

Query: 181 -----------------------------EMRPSPNCATYNAFITGYCRVNELDKALHLF 211
                                        +    P+   YN  ++G C  +   +A+ + 
Sbjct: 236 FRMDGCTLGCFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDIL 295

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M +    PN VT+ IL+     KG LG   + L  ++  +      ++  S  L+ +Y
Sbjct: 296 DRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILS-MMMTEGCYPNREMFNS--LVHAY 352

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS------AFAYFCQMLKR 325
            K+ D   A  L+  M +   Q   + YN+ I   C N ++        A   + +ML  
Sbjct: 353 CKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDL 412

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G + + +  +    CLC  GK D+A      +   G  PD  +Y  +I  LC    + KA
Sbjct: 413 GVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKA 472

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
                 M +  +VP  + + ++ID + + G +  A +  D ML    + NV T+ +LI A
Sbjct: 473 FLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHA 532

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML------- 498
             +   +FDA  L + MLL+G  P+V TY  LI   C  G I  A Q+Y  M        
Sbjct: 533 YLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSD 592

Query: 499 ---------RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
                        TP+IITY  L+ G C    ++EA E+   +   G   + I +  L  
Sbjct: 593 IDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALID 652

Query: 550 RYRRMKESDKARDIHQK 566
            + +  + + A+++  K
Sbjct: 653 GFCKTGKLENAQEVFVK 669



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 189/420 (45%), Gaps = 20/420 (4%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N+L+ + C+ G    A   +  + +     +  TYNA I  + R ++LD A  +   M+N
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSN 233

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLG--EVLADDDGKATSDVITSTILMDSYFKN 274
           +G R +  T     ++LCK G  GDA+  L   E + D       + + S +   S F+ 
Sbjct: 234 SGFRMDGCTLGCFAYSLCKAGRCGDALSLLEKEEFVPD---TVFYNRMVSGLCEASLFQ- 289

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
               +A+ + + M   +   ++V Y +L++G    G +         M+  G  P+   +
Sbjct: 290 ----EAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMF 345

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N+L++  CK      A   +  + K G  P  + Y   I  +C + ++  +   LL + E
Sbjct: 346 NSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSD--LLELAE 403

Query: 395 KSVVPEPHIWNVI----IDGYGRC----GDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           K+      +  V+    +  + RC    G    AF I   M+S G   +  T++ +I   
Sbjct: 404 KAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFL 463

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
                +  AF L +EM  +GI P V+TY +LI + C  G I  A   +DEMLR   TP++
Sbjct: 464 CDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNV 523

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +TYT LI  +     + +A ++F  +   G   + + +  L   + +  + DKA  I+ +
Sbjct: 524 VTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYAR 583



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 143/338 (42%), Gaps = 38/338 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  LC   ++  A  L   M   G  P+ + ++ L++  CK G LE A  V  +MSE 
Sbjct: 614 ALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSER 673

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY++ I    +   LD  L + S M  N   PN V +  ++  LCK G   +A
Sbjct: 674 GYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEA 733

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + +   L  ++     +VIT T ++D + K G   Q L L+ DM  K    + + Y VL
Sbjct: 734 YRLM---LKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVL 790

Query: 303 INGFCLNGDISSAFAYFCQMLK--------------RGFLPDVIT--------------- 333
           IN  C  G +  A     +M +               GF  + IT               
Sbjct: 791 INHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESVP 850

Query: 334 ----YNTLLNCLCKQGKLDEASHFYGVLSKTG--VAPDQISYKTIIQGLCIHGDIVKARE 387
               Y  L++   K G+L+ A +    +S +      ++  Y ++I+ L     + KA E
Sbjct: 851 VESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFE 910

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
              SM+ K+VVPE   +  +I G  R G    A  + D
Sbjct: 911 LYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSD 948



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/397 (22%), Positives = 152/397 (38%), Gaps = 49/397 (12%)

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAV--KFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           G     V +N L+  LC   +  D V  KFL ++  DDD +    ++    L+    +NG
Sbjct: 128 GYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQI-RDDDRELLRKLLN--FLIQKCCRNG 184

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
               AL     +     +     YN LI  F     + +AF    +M   GF  D  T  
Sbjct: 185 MWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLG 244

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
                LCK G+  +A     +L K    PD + Y  ++ GLC      +A + L  M   
Sbjct: 245 CFAYSLCKAGRCGDA---LSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSI 301

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
           S +P    + +++ G    G L     I  +M++ G   N   FN+L+ A  +      A
Sbjct: 302 SCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYA 361

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCN-------------------------------- 483
           + L K+M+  G  P    YN+ IG+ C+                                
Sbjct: 362 YKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNV 421

Query: 484 ---------LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
                     G    A ++  EM+ +G  PD  TY+++I   C    +++A  +F +++ 
Sbjct: 422 SNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKK 481

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            G+      + IL   + +     +AR+   + L  N
Sbjct: 482 NGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDN 518



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 6/195 (3%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GKI   L L R M  KG  P+ +T+  L+N  C  G L++A  ++ EM +     + ++Y
Sbjct: 763 GKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSY 822

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I G+ R  E   ++ L   ++ N   P    + IL+    K G L  A+  L E+ +
Sbjct: 823 RKIIEGFNR--EFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEI-S 879

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                A ++    T L++S        +A  L+  M  KN+  ++  +  LI G    G 
Sbjct: 880 SSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGK 939

Query: 312 ISSAFAY---FCQML 323
              A       CQM+
Sbjct: 940 WQEALQLSDSICQMV 954


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 214/456 (46%), Gaps = 15/456 (3%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +L+  L  L  M+  G     +E D       I  L  G K+  AL    +M   G  PD
Sbjct: 247 MLRNALRILTLMQKAG-----VEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPD 301

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           ++++N L+   C +  ++ A  +I EM      P+  +Y   +   C+  ++++   L  
Sbjct: 302 IVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLME 361

Query: 213 TMA-NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
            M  N+ + P++VT+N L++AL K G   DA+ FL E  A++ G     V  S ++ DS+
Sbjct: 362 NMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLRE--AEEKGFHIDKVGYSAVV-DSF 418

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            KN +  +A +L  DM+ K    D+V Y  +I+GFC  G I  A     QM K G  P+ 
Sbjct: 419 CKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNT 478

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TY  LLN LC  GK  EA     V  +    P+ I+Y  ++ GL   G + +A +    
Sbjct: 479 VTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTRE 538

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M+EK  +P P   N++I    R  ++  A    +  L  G + NV  F ++I    + G 
Sbjct: 539 MIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGD 598

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           +  A S+ ++M L    PD  TY  L  A      +  A +L  +ML +GI P  +TY  
Sbjct: 599 LDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRA 658

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +I   C  G + +  ++  K+      I   PF+ +
Sbjct: 659 VIHRFCQWGRVDDMMKLLEKM------IARQPFKTV 688



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 204/443 (46%), Gaps = 6/443 (1%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G +  AL +   M + G  PD+   N  +  L K   LEKA   +  M      P+  +
Sbjct: 245 AGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVS 304

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I GYC V+ +D AL L + M   G  P++V++  ++  LCK   + +  + +  ++
Sbjct: 305 YNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMV 364

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
            + +     D +T   L+ +  K+G    AL    +  +K    D V Y+ +++ FC N 
Sbjct: 365 QNSN--LIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNK 422

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           +I  A +    M  +G  PDV+TY  +++  C+ GK+DEA      + K G  P+ ++Y 
Sbjct: 423 NIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYT 482

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            ++ GLC +G  ++ARE +    E    P    ++ ++ G  R G LS A  +   M+  
Sbjct: 483 VLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEK 542

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G   N    N LI +  R  ++  A    +E L  G   +V  +  +I   C +G +  A
Sbjct: 543 GFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAA 602

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP--FRILK 548
           L + ++M      PD ITYT L      +  + EA E+  K+  LG  ID  P  +R + 
Sbjct: 603 LSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKM--LGKGIDPTPVTYRAVI 660

Query: 549 KRYRRMKESDKARDIHQKWLLRN 571
            R+ +    D    + +K + R 
Sbjct: 661 HRFCQWGRVDDMMKLLEKMIARQ 683



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 192/409 (46%), Gaps = 5/409 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G    AL   R+  +KG   D + ++ +V+  CK  +++KA  ++ +M     +P+  TY
Sbjct: 387 GHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTY 446

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
            A I G+CRV ++D+A  +   M  +G +PN VT+ +L++ LC  G   +A + +     
Sbjct: 447 TAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMIN---V 503

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            ++   T + IT + +M    + G   +A  L  +M +K    + V  N+LI   C N +
Sbjct: 504 SEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQN 563

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A  Y  + L +G   +V+ + +++   C+ G LD A      +  +   PD I+Y T
Sbjct: 564 VVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTT 623

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +   L     + +A E ++ ML K + P P  +  +I  + + G + +   + + M++  
Sbjct: 624 LFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQ 683

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
               V  +N +I      G+  +A  L  ++L      D  T ++LI +    G+   A 
Sbjct: 684 PFKTV--YNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAY 741

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           ++  +M RR + PD+    ++ K     G   EA+++  +    G+  +
Sbjct: 742 KVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERGIQTE 790



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/424 (22%), Positives = 177/424 (41%), Gaps = 8/424 (1%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSE--MRPSPNCATYNAFITGYCRVNELDKALH 209
           D + +  +++ L K    + A  ++R M+   +  SP   +Y   +  Y R   L  AL 
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSY--VMVSYSRAGMLRNALR 253

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           + + M   G+ P+    N  ++ L K   L  A++FL  +          D+++   L+ 
Sbjct: 254 ILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKV---AGIEPDIVSYNCLIK 310

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG-FL 328
            Y        AL L  +M  K    D V+Y  ++   C +  +         M++    +
Sbjct: 311 GYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLI 370

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           PD +TYNTL+  L K G  D+A  F     + G   D++ Y  ++   C + +I KA+  
Sbjct: 371 PDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSL 430

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           ++ M  K   P+   +  IIDG+ R G +  A  +   M   G   N  T+  L+     
Sbjct: 431 VIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCH 490

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G   +A  +          P+  TY+ ++      G +  A  L  EM+ +G  P+ + 
Sbjct: 491 NGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVD 550

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
              LI+  C   N+  A++   +    G A++ + F  +   + ++ + D A  + +   
Sbjct: 551 INLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMY 610

Query: 569 LRNK 572
           L NK
Sbjct: 611 LSNK 614



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 133/301 (44%), Gaps = 7/301 (2%)

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
           AD   +   D I    ++D   K      A  +   M ++ I+    A++ ++  +   G
Sbjct: 187 ADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAG 246

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            + +A      M K G  PD+   NT +  L K  KL++A  F   +   G+ PD +SY 
Sbjct: 247 MLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYN 306

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +I+G C    I  A E +  M  K   P+   +  ++     C D      ++ LM + 
Sbjct: 307 CLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFL--CKD-RKVEEVKRLMENM 363

Query: 431 GVSSNVF----TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
             +SN+     T+N LI A ++ G   DA    +E    G   D   Y+ ++ + C   +
Sbjct: 364 VQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKN 423

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           I  A  L  +M  +G  PD++TYT +I G C  G + EA+++  ++   G   + + + +
Sbjct: 424 IDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTV 483

Query: 547 L 547
           L
Sbjct: 484 L 484


>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
          Length = 683

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 206/445 (46%), Gaps = 32/445 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AVI      G +  A    ++M   G  PD  T+N LV+ +C+ G +++A  ++++M   
Sbjct: 185 AVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERA 244

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY   + G+C  + +++A+ +   M   G+     T+  LVH   +      A
Sbjct: 245 GIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERA 304

Query: 243 VKFLGEVLADD--------------------DGKATS------------DVITSTILMDS 270
            + L E +  D                    D +A                 T +I++  
Sbjct: 305 YRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPC 364

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K  +      L +D  +K        Y ++I  F    DIS A  YF QM+  G L  
Sbjct: 365 AVKVLESSDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSS 424

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V +YN +++C  K G+++ A     V+ ++G +P+ +++ T+I G    G++  A+ FL 
Sbjct: 425 VESYNIVIDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLK 484

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            ++E  ++P+   +  +IDG      L +AF+    M  +GV  NV T+N LI      G
Sbjct: 485 MVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAG 544

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +  A  L  +M +DGI PD +++N  I + C +  I  A +L+++M R G++PD  TY 
Sbjct: 545 HVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYN 604

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTL 535
            LIK  C    + EA+E+   ++++
Sbjct: 605 ALIKALCDERRVDEAKEIILAMESI 629



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 200/435 (45%), Gaps = 6/435 (1%)

Query: 132 GKIGTALWLRRKMIQK---GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           G++G A +     +Q    G  P    +N ++    + G ++ A    ++M      P+C
Sbjct: 156 GRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDC 215

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN  + G CR   +D+AL L   M   GIRPN VT+ +LV   C    + +AV  L E
Sbjct: 216 FTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVL-E 274

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
            + +    AT     S  L+   F+  +K +A  + ++  + +     +AY+ L+     
Sbjct: 275 RMKEKGVSATEATYRS--LVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSK 332

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           N     A     +M KRG+L    T++ ++ C  K  +  +         K G       
Sbjct: 333 NDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDM 392

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y  II+      DI KA ++   M+   ++     +N++ID + + G++  A     +M 
Sbjct: 393 YIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQ 452

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G S N+ TFN LI    + G++ DA +  K ++  G+ PDV T+  LI   C+   + 
Sbjct: 453 ESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLD 512

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A   + EM   G+ P++ TY  LI G C+ G++ +A E+  K++  G+  D   F    
Sbjct: 513 DAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPI 572

Query: 549 KRYRRMKESDKARDI 563
             + RM++ +KA+ +
Sbjct: 573 LSFCRMRKIEKAQKL 587



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 84/162 (51%)

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +++ +GR G    A  +   +   G+  +   +NA+I A  R G++  A+   ++M  DG
Sbjct: 151 LVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADG 210

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             PD FTYN L+   C  G +  AL+L  +M R GI P+++TYT L+ G C    ++EA 
Sbjct: 211 CRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAV 270

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            V  +++  G++     +R L     R  E ++A  +  +W+
Sbjct: 271 CVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWI 312



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/294 (20%), Positives = 133/294 (45%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L++S+ + G    A  ++  + +  ++     YN +I      G + +A+  F QM   G
Sbjct: 151 LVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADG 210

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PD  TYNTL++ +C++G +DEA      + + G+ P+ ++Y  ++ G C    + +A 
Sbjct: 211 CRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAV 270

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
             L  M EK V      +  ++ G  RC +   A+ +    +    + +   ++ L+   
Sbjct: 271 CVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCL 330

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
           ++     +A  L K+M   G      T++++I  +  +       +L D+ +++G     
Sbjct: 331 SKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGF 390

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
             Y  +IK      ++ +A + F+++ + GL      + I+   + +  E ++A
Sbjct: 391 DMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERA 444


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 176/374 (47%), Gaps = 19/374 (5%)

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           LC +G  EKA  +++EM      P+ +TY   IT  C+   +DKA  LF  M   G+ P+
Sbjct: 427 LCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPD 486

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
             T+ IL+ + CK GL+  A  +  E+ +      + +V+T T L+ +Y K+   +QA  
Sbjct: 487 VYTYTILIDSFCKAGLIEQAQSWFDEMRS---AGCSPNVVTYTALLHAYLKSKQLYQAND 543

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG---------------- 326
           +++ M       + + Y+ LI+G C  G+I  A   + +++                   
Sbjct: 544 IFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDT 603

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+V+TY  L+N LCK  K+ +A      +   G  P+QI Y  ++ G C  G+I  A+
Sbjct: 604 ISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQ 663

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E  L M +   +P  H +  +ID   + G L  A  +   ML    + NV T+ A++   
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGL 723

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G    A +L   M   G  P+V TY  LI      G +   L+L+ +M  +G  P+ 
Sbjct: 724 CKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNY 783

Query: 507 ITYTELIKGHCARG 520
           +TY  LI   CA G
Sbjct: 784 VTYRILINHCCAAG 797



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 181/403 (44%), Gaps = 22/403 (5%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI  LC   ++  A  L ++M + G  PDV T+  L++  CK G +E+A    
Sbjct: 451 DASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWF 510

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM     SPN  TY A +  Y +  +L +A  +F  M  +   PN +T++ L+  LCK 
Sbjct: 511 DEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKA 570

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G +  A +   +++       TSD I S    D YF+  D               I  ++
Sbjct: 571 GEIQKACEVYAKLIG------TSDNIES----DFYFEGKDT------------DTISPNV 608

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  L+NG C    +S A      ML  G  P+ I Y+ L++  CK G++D A   +  
Sbjct: 609 VTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLR 668

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           ++K G  P   +Y ++I  +   G +  A + L  ML+ S  P    +  ++DG  + G+
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGE 728

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
              A ++  LM   G S NV T+ ALI    + G +     L  +M   G  P+  TY +
Sbjct: 729 TEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRI 788

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           LI   C  G +  A  L DEM +      +  Y   ++G   R
Sbjct: 789 LINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKR 831



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 127/549 (23%), Positives = 220/549 (40%), Gaps = 105/549 (19%)

Query: 88  NALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           +ALDL+ +E+  +L T      V CT          +I  L        A+    +M   
Sbjct: 257 DALDLLEREDF-KLDT------VLCT---------QMISGLMEASLFNEAMSFLHRMRCN 300

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
             +P+V+T+  L+    K   L     +I  M     +P+ + +N+ +  YC   +   A
Sbjct: 301 SYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYA 360

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKK------GLLGDAVKFLGEVLADD-------- 253
             LF+ M   G  P  V +NI + ++C +       LL  A K   E+L           
Sbjct: 361 YKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINT 420

Query: 254 ---------DGKATSDV-ITSTILMDSYFKNGDKF--------------QALALWNDMFQ 289
                     GK      I   ++   +  +   +              +A  L+ +M +
Sbjct: 421 ANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKK 480

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             +  D+  Y +LI+ FC  G I  A ++F +M   G  P+V+TY  LL+   K  +L +
Sbjct: 481 VGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQ 540

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE---------------------- 387
           A+  +  +      P+ I+Y  +I GLC  G+I KA E                      
Sbjct: 541 ANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKD 600

Query: 388 -----------------------------FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
                                         L +ML     P   +++ ++DG+ + G++ 
Sbjct: 601 TDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEID 660

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           +A  +   M   G   +V T+ +LI    + G +  A  +  +ML D   P+V TY  ++
Sbjct: 661 SAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMV 720

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G    AL L   M ++G +P+++TYT LI G    G +    E+F +++T G A
Sbjct: 721 DGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCA 780

Query: 539 IDHIPFRIL 547
            +++ +RIL
Sbjct: 781 PNYVTYRIL 789



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 177/401 (44%), Gaps = 24/401 (5%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKG----------------TVPDVLTHNYLVNELC 164
           + A+I  LC  G+I  A  +  K+I                     P+V+T+  LVN LC
Sbjct: 560 YSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLC 619

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           K   +  A  ++  M      PN   Y+A + G+C+V E+D A  +F  M   G  P+  
Sbjct: 620 KAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVH 679

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           T+  L+  + K G L  A+K L ++L D       +V+T T ++D   K G+  +AL L 
Sbjct: 680 TYTSLIDRMFKDGRLDLAMKVLSQMLKDS---CNPNVVTYTAMVDGLCKTGETEKALNLL 736

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           + M +K    ++V Y  LI+G    G + +    F QM  +G  P+ +TY  L+N  C  
Sbjct: 737 SLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAA 796

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
           G LD+A      + +T        Y+T +QG       + +   L  M      P   ++
Sbjct: 797 GLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGF--SKRFLASLGLLEEMESHDTAPIAPVY 854

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT---FNALILAETRGGSIFDAFSLKKE 461
            ++ID + + G L  A  +   M+    S N+ +     +LI A      + +A +L  E
Sbjct: 855 GMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSE 914

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           M   GI PD+  +  L+         + ALQL   + + G+
Sbjct: 915 MRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGV 955



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 116/494 (23%), Positives = 201/494 (40%), Gaps = 57/494 (11%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R  CL G  G AL    ++   G  P  +T+N LV  L   G +E A  V +EMS   
Sbjct: 175 LVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASG 234

Query: 184 PSPNCATYNAF--------------------------------ITGYCRVNELDKALHLF 211
              + +T  +F                                I+G    +  ++A+   
Sbjct: 235 FCMDRSTVGSFAQALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFL 294

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M  N   PN VT+  L+    KK  LG   + +  ++ +    + S +  S  L+ +Y
Sbjct: 295 HRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPS-LFNS--LVHTY 351

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS------AFAYFCQMLKR 325
               D   A  L+N M         V YN+ I   C   ++ +      A   + +ML  
Sbjct: 352 CNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVA 411

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
             + + I       CLC  GK ++A      + + G  PD  +Y  +I  LC    + KA
Sbjct: 412 SCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKA 471

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
                 M +  V P+ + + ++ID + + G +  A S  D M S G S NV T+ AL+ A
Sbjct: 472 FLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHA 531

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG---- 501
             +   ++ A  +   M+ D  +P+  TY+ LI   C  G I  A ++Y +++       
Sbjct: 532 YLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIE 591

Query: 502 ------------ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
                       I+P+++TY  L+ G C    + +A ++   +   G   + I +  L  
Sbjct: 592 SDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVD 651

Query: 550 RYRRMKESDKARDI 563
            + ++ E D A+++
Sbjct: 652 GFCKVGEIDSAQEV 665



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 173/413 (41%), Gaps = 41/413 (9%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N LV   C  G   +A   +  + +    P+  TYNA +       +++ A  +   M+ 
Sbjct: 173 NVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSA 232

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI--LMDSYFKN 274
           +G   +R T      ALCK+G  GDA+    ++L  +D K  + + T  I  LM++   N
Sbjct: 233 SGFCMDRSTVGSFAQALCKEGRWGDAL----DLLEREDFKLDTVLCTQMISGLMEASLFN 288

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
               +A++  + M   +   ++V Y  L+ GF     +         M+  G  P    +
Sbjct: 289 ----EAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLF 344

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N+L++  C       A   +  ++  G  P  + Y   I  +C        RE L     
Sbjct: 345 NSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSIC-------GREEL----- 392

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN-ALILAETRGGSIF 453
               P P + ++    Y             +++++  V + + T N A  L     G   
Sbjct: 393 ----PNPELLDLAEKVY------------EEMLVASCVLNKINTANFARCLCGV--GKFE 434

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            AF + KEM+  G  PD  TY  +I   C    +  A  L+ EM + G+ PD+ TYT LI
Sbjct: 435 KAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILI 494

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
              C  G +++A+  F ++++ G + + + +  L   Y + K+  +A DI  +
Sbjct: 495 DSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHR 547



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 130/281 (46%), Gaps = 34/281 (12%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
            +C        + ++I  +   G++  A+ +  +M++    P+V+T+  +V+ LCK G+ 
Sbjct: 670 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGET 729

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           EKA +++  M +   SPN  TY A I G  +  ++D  L LF  M   G  PN VT+ IL
Sbjct: 730 EKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRIL 789

Query: 230 VHALCKKG---------------------------LLGDAVKFLGE--VLADDDGKATSD 260
           ++  C  G                           + G + +FL    +L + +   T+ 
Sbjct: 790 INHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAP 849

Query: 261 VI-TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA---YNVLINGFCLNGDISSAF 316
           +     +L+DS+ K G    AL L  +M + +   ++ +   +  LI   CL+  +  A 
Sbjct: 850 IAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAV 909

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF-YGV 356
           A + +M +RG +PD+  +  L+  L ++ K +EA    YG+
Sbjct: 910 ALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGI 950


>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
 gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
          Length = 526

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 216/424 (50%), Gaps = 25/424 (5%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D + +N  ++  CK G++ +A  ++ EM     +P+   Y   I GYC   E+  A  +F
Sbjct: 104 DKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVF 163

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M    I P+ VT+NIL    CK GL+ +    L + +AD   +  S  +T  I +  +
Sbjct: 164 EEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLL-DRMADHGLEPNS--LTYGIAIVGF 220

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            + G+  +A  L+N + +K I    V Y+ ++ G+ L+G    A+  F ++ ++G L D 
Sbjct: 221 CRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDH 280

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            + + L+N LC+ G +  AS+   ++ +  V PD ISY  +I   C +GD+ KA  +   
Sbjct: 281 FSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHD 340

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI-------- 443
           M+++ +  +  ++ ++++GY + G L  A  +   M + G+  +V  +  L+        
Sbjct: 341 MVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETL 400

Query: 444 ------LAETRGGSIFDA-----FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
                 +A+ R   +  A      S  K+M ++   PDV  Y +LI   C   ++  A +
Sbjct: 401 QQGWEGIAKERRSFLLRANHNKLLSSMKDMQIE---PDVPCYTVLIDGKCKAEYLVEARE 457

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           L+DEML++G+TPD   YT LI G+C++G + +AE++  ++   G+  D + F +L +   
Sbjct: 458 LFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSL 517

Query: 553 RMKE 556
           R ++
Sbjct: 518 RSRK 521



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 203/394 (51%), Gaps = 3/394 (0%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           + +N +++ LCK   L++A+ ++   +    +P+   Y+  I  YC++  L KA+  +  
Sbjct: 1   MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M ++GI  N    + L+    K G+  + + +    L   D     D +   I MD+Y K
Sbjct: 61  MVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYF---LKFKDSGLHLDKVIYNIAMDTYCK 117

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           NG+  +A+ L N+M    +  D + Y  LING+CL G++ +A   F +MLK    PD++T
Sbjct: 118 NGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVT 177

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN L +  CK G + E       ++  G+ P+ ++Y   I G C  G++ +A      + 
Sbjct: 178 YNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVE 237

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           EK +     +++ ++ GY   G   +A+ +   +   G   + F+ + LI    R G++ 
Sbjct: 238 EKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQ 297

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A ++ K ML   + PDV +Y+ LI   C  G +  A   + +M++RG++ D+I YT L+
Sbjct: 298 GASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILM 357

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G+C  G ++EA ++F ++  LG+  D I + +L
Sbjct: 358 NGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVL 391



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 214/501 (42%), Gaps = 64/501 (12%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC   ++  A  L     ++G+ PDV  ++YL+   CK+G+L KA      M    
Sbjct: 6   VMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHG 65

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              NC   +  +  + ++    + +  F    ++G+  ++V +NI +   CK G + +AV
Sbjct: 66  IETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAV 125

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L E+     G  T D I  T L++ Y   G+   A  ++ +M + NI+ DIV YN+L 
Sbjct: 126 KLLNEMKC---GGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILA 182

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GFC +G +   F    +M   G  P+ +TY   +   C+ G L EA   + V+ + G+ 
Sbjct: 183 SGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGID 242

Query: 364 PDQISYKTIIQG-----------------------------------LCIHGDIVKAREF 388
             ++ Y +++ G                                   LC  G++  A   
Sbjct: 243 HIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNV 302

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              MLE +VVP+   ++ +I  Y + GD+  A      M+  G+S +V  +  L+    +
Sbjct: 303 CKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCK 362

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ---------------- 492
            G + +A  L  +M   GI PDV  Y +L+      GH+   LQ                
Sbjct: 363 AGRLQEACQLFVQMTNLGIKPDVIAYTVLLD-----GHLKETLQQGWEGIAKERRSFLLR 417

Query: 493 -----LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
                L   M    I PD+  YT LI G C    + EA E+F ++   GL  D   +  L
Sbjct: 418 ANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTAL 477

Query: 548 KKRYRRMKESDKARDIHQKWL 568
              Y    E  KA D+ Q+ +
Sbjct: 478 INGYCSQGEISKAEDLLQEMI 498



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 184/404 (45%), Gaps = 54/404 (13%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  A+ L  +M   G  PD + +  L+N  C  G+++ A  V  EM +    P+ 
Sbjct: 116 CKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDI 175

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN   +G+C+   + +   L   MA++G+ PN +T+ I +   C+ G L +A      
Sbjct: 176 VTYNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNV 235

Query: 249 VLADDDGKATSDVITSTILMDSYFKNG-------------------DKFQALALWND--- 286
           V  ++ G    +V+ S+++   Y  +G                   D F    L ND   
Sbjct: 236 V--EEKGIDHIEVMYSSMVC-GYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCR 292

Query: 287 -------------MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                        M + N+  D+++Y+ LI+ +C NGD+  A  +F  M++RG   DVI 
Sbjct: 293 VGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIV 352

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC-------IHGDIVKAR 386
           Y  L+N  CK G+L EA   +  ++  G+ PD I+Y  ++ G           G   + R
Sbjct: 353 YTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERR 412

Query: 387 EFLL---------SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
            FLL         SM +  + P+   + V+IDG  +   L  A  + D ML  G++ + +
Sbjct: 413 SFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAY 472

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + ALI      G I  A  L +EM+  GI PD  T+++L  +S
Sbjct: 473 AYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSS 516



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 175/371 (47%), Gaps = 6/371 (1%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            YN  + G C+   LD+A  L    A  G  P+   ++ L+ + CK G L  AV     +
Sbjct: 2   AYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAM 61

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           ++   G  T+  I S  L+  + K G   + +A +       +  D V YN+ ++ +C N
Sbjct: 62  VSH--GIETNCHIVS-YLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKN 118

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G+++ A     +M   G  PD I Y  L+N  C +G++  A   +  + K  + PD ++Y
Sbjct: 119 GNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTY 178

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             +  G C  G +++  + L  M +  + P    + + I G+ R G+LS A  + +++  
Sbjct: 179 NILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEE 238

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+      +++++      G    A+ L   +   G   D F+ + LI   C +G++  
Sbjct: 239 KGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQG 298

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A  +   ML   + PD+I+Y++LI  +C  G+M +A   F  +   GL+ID I + IL  
Sbjct: 299 ASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMN 358

Query: 550 RY---RRMKES 557
            Y    R++E+
Sbjct: 359 GYCKAGRLQEA 369



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 169/390 (43%), Gaps = 54/390 (13%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I   CL G++  A  +  +M++    PD++T+N L +  CK G + +  
Sbjct: 136 LTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVF 195

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI-------------- 219
            ++  M++    PN  TY   I G+CR   L +A  LF+ +   GI              
Sbjct: 196 DLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGY 255

Query: 220 ------------------RPNRVTH---NILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
                             + N V H   + L++ LC+ G +  A      +L  +     
Sbjct: 256 LLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHN---VV 312

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            DVI+ + L+  Y +NGD  +A   ++DM Q+ +  D++ Y +L+NG+C  G +  A   
Sbjct: 313 PDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQL 372

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQ-------GKLDEASHFY---------GVLSKTGV 362
           F QM   G  PDVI Y  LL+   K+       G   E   F            +    +
Sbjct: 373 FVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQI 432

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD   Y  +I G C    +V+ARE    ML+K + P+ + +  +I+GY   G++S A  
Sbjct: 433 EPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAED 492

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +   M+  G+  +  TF+ L  +  R   I
Sbjct: 493 LLQEMIDKGIEPDELTFSVLNQSSLRSRKI 522


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 203/422 (48%), Gaps = 18/422 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  L    K   AL L ++++     P+  T+N L+   CK G + +A  V  +M   
Sbjct: 2   ALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSS 61

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN +T N  + G C + ++  AL LF  M      P   +HNIL+      G + DA
Sbjct: 62  GLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDA 121

Query: 243 VKFLGEVLADDDGKATSDVITST---ILMDSYFKNGDK---FQALALWNDMFQKNIQTDI 296
           +  L      D  K++S V T T   +L    ++N       QA+  + +M    ++ D+
Sbjct: 122 LAHL-----QDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDL 176

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
            +Y++L++    +G ++ A A F  M      PD++TYN L++  CK G+  EA      
Sbjct: 177 ESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKE 233

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + K G  P+  +Y  II   C    + +A E  + M+E + VP    +N +I G+ + G 
Sbjct: 234 ILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGM 293

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           L +A  +   M   G  + + T+N LI  L + RGG ++ A  L  ++   G+ P + TY
Sbjct: 294 LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGG-VYTAVDLFNKLEGAGLTPTIVTY 352

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N LI   C+   +  A+Q +DEM  +   P++ITY+ LI G C    MKEA +    ++ 
Sbjct: 353 NSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKA 411

Query: 535 LG 536
            G
Sbjct: 412 HG 413



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 200/437 (45%), Gaps = 51/437 (11%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L++ ++  K M+ +G     +E D   +  ++  L   G++  A  L   M      PD+
Sbjct: 157 LEQAMEFFKEMKASG-----VEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDI 208

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N L++  CKIG   +A  +++E+ +    PN  TY+  I  YC+++++++A  +F  
Sbjct: 209 MTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMK 268

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  +   PN VT N L+   CK G+L DA+K                             
Sbjct: 269 MIESNCVPNAVTFNTLIAGFCKAGMLEDAIK----------------------------- 299

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN-GDISSAFAYFCQMLKRGFLPDVI 332
                    L+ +M +   +  IV YN LI+  C   G + +A   F ++   G  P ++
Sbjct: 300 ---------LFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIV 350

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TYN+L+   C   +L EA  ++  +     AP+ I+Y  +I GLC    + +A + L  M
Sbjct: 351 TYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDM 409

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
                 P    +  +I+G+ +CG+L +A    + M   G + N   FN LI    +    
Sbjct: 410 KAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERA 469

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            D   L   M  +G  PDV TYN LI   C+   +  A +L+D M      P++ T+  L
Sbjct: 470 NDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFL 526

Query: 513 IKGHCARGNMKEAEEVF 529
           I+G CA+  ++EA  + 
Sbjct: 527 IRGLCAQKKVEEARNIL 543



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 195/400 (48%), Gaps = 18/400 (4%)

Query: 171 KADHVIREMSEMRP---SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           K D  +R   E+     +PN  TYN  I G+C+  ++ +A+ +FS M ++G+ PN  T N
Sbjct: 12  KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 71

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            L+  LC+ G +  A+K   E+ A   G       +  IL+  +F  G    ALA   DM
Sbjct: 72  TLLLGLCEIGQMSSALKLFREMQA---GPFLPTSASHNILLRGFFMAGRVRDALAHLQDM 128

Query: 288 FQKNIQTDIVAYNVLINGFCLNGD----ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            + +       YN+++ G C        +  A  +F +M   G  PD+ +Y+ LL+ L  
Sbjct: 129 RKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSD 188

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G++ EA   +  ++    +PD ++Y  ++ G C  G   +A+  +  +L+    P    
Sbjct: 189 SGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFT 245

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +++II+ Y +   +  A+ +   M+      N  TFN LI    + G + DA  L  EM 
Sbjct: 246 YSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEME 305

Query: 464 LDGIFPDVFTYNLLIGASC-NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
             G    + TYN LI + C   G ++ A+ L++++   G+TP I+TY  LI+G C    +
Sbjct: 306 KIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRL 365

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKESDK 559
            EA + F +++    A + I + IL     + RRMKE+ K
Sbjct: 366 SEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAK 404



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/515 (23%), Positives = 221/515 (42%), Gaps = 85/515 (16%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS--- 180
           +IR  C GG++  A+ +   M   G +P+  T N L+  LC+IG +  A  + REM    
Sbjct: 38  LIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGP 97

Query: 181 -----------------------------EMRPSPNC---ATYNAFITGYC----RVNEL 204
                                        +MR S +     TYN  + G C      N L
Sbjct: 98  FLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRL 157

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           ++A+  F  M  +G+ P+  +++IL+ AL   G + +A      +        + D++T 
Sbjct: 158 EQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM------TCSPDIMTY 211

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
            +LMD Y K G  ++A +L  ++ +   + ++  Y+++IN +C    +  A+  F +M++
Sbjct: 212 NVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 271

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK------------------------- 359
              +P+ +T+NTL+   CK G L++A   +  + K                         
Sbjct: 272 SNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVY 331

Query: 360 -----------TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
                       G+ P  ++Y ++IQG C    + +A ++   M E    P    ++++I
Sbjct: 332 TAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILI 390

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           DG  +   +  A    + M + G +  V T+  LI    + G +  A    ++M L G  
Sbjct: 391 DGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCA 450

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P+   +N LI   C     +  L+L   M   G  PD+ITY  LI G C+   +++A+ +
Sbjct: 451 PNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 510

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           F     +  A +   F  L +     K+ ++AR+I
Sbjct: 511 F---DGMACAPNVTTFNFLIRGLCAQKKVEEARNI 542



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 123/276 (44%), Gaps = 7/276 (2%)

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N L++G         A   F ++L   F P+  TYN L+   CK G++ +A   +  +  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
           +G+ P+  +  T++ GLC  G +  A +    M     +P     N+++ G+   G + +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 420 AFSIRDLMLSFGVSSNVFTFN----ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
           A +    M     S    T+N     L         +  A    KEM   G+ PD+ +Y+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           +L+ A  + G +  A  L+  M     +PDI+TY  L+ G+C  G   EA+ +  +I   
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           G   +   + I+   Y ++ + ++A ++  K +  N
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESN 273


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 207/427 (48%), Gaps = 3/427 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           ++ + + L + G I  A +   KM Q G V +  ++N L+  L + G  ++A  V + M 
Sbjct: 160 YLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMI 219

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  TY+A +    R  +    + L   M   G+RPN  T+ I +  L + G + 
Sbjct: 220 SEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRID 279

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA   L  +  +D+G    DV+T T+L+D+    G   +A  L+  M   + + D+V Y 
Sbjct: 280 DAYGILKTM--EDEG-CGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYI 336

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L++ F   GD+ +   ++ +M   G+ PDV+TY  L+  LCK GK+D+A     V+   
Sbjct: 337 TLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVR 396

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+  +Y T+I GL     + +A E   +M    V P  + + + ID YG+ GD   A
Sbjct: 397 GIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKA 456

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
               + M   G+  ++   NA + +    G I +A  +  ++   G+ PD  TYN+++  
Sbjct: 457 LDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKC 516

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
               G I  A +L  EML  G  PDII    LI      G + EA ++F +++ L LA  
Sbjct: 517 YSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPT 576

Query: 541 HIPFRIL 547
            + + IL
Sbjct: 577 VVTYNIL 583



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 187/411 (45%), Gaps = 3/411 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL + ++MI +G  P + T++ L+  L +  D      ++ EM  +   PN  TY   I 
Sbjct: 211 ALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIR 270

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
              R   +D A  +  TM + G  P+ VT+ +L+ ALC  G L  A +   ++ A     
Sbjct: 271 VLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSH-- 328

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D++T   LM  +   GD       W++M       D+V Y +L+   C +G +  AF
Sbjct: 329 -KPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAF 387

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
                M  RG +P++ TYNTL++ L    +LDEA   +  +   GVAP   SY   I   
Sbjct: 388 DMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYY 447

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
              GD  KA +    M ++ ++P     N  +      G +  A  I + + + G+S + 
Sbjct: 448 GKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDS 507

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+N ++   ++ G I  A  L  EML +G  PD+   N LI      G +  A Q++  
Sbjct: 508 VTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGR 567

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +    + P ++TY  LI G    G + +A ++F  ++  G   + + F  L
Sbjct: 568 LKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNAL 618



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 179/357 (50%), Gaps = 4/357 (1%)

Query: 122  VAVIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
            + +IR LC   K   A  L  K  +  GT P   ++N L++ L      E A  +  EM 
Sbjct: 756  LPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMK 815

Query: 181  EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                 PN  TYN  +  + +   +D+   L++ M   G +PN +THNI++ AL K   + 
Sbjct: 816  NAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSIN 875

Query: 241  DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
             A+    E+++ D    +    T   L+    K G   +A+ ++ +M     + +   YN
Sbjct: 876  KALDLYYEIISGD---FSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYN 932

Query: 301  VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +LINGF   G+++ A   F +M+K G  PD+ +Y  L+ CL   G++D+A H++  L  T
Sbjct: 933  ILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLT 992

Query: 361  GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            G+ PD +SY  +I GL     + +A      M  + + PE + +N +I  +G  G +  A
Sbjct: 993  GLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQA 1052

Query: 421  FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
              + + +   G+  NVFT+NALI   ++ G+   AFS+ K+M++ G  P+  T+  L
Sbjct: 1053 GKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 202/451 (44%), Gaps = 12/451 (2%)

Query: 105 RDTGPVRCTLE--------TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           RDTG +   LE         +   +   IR L   G+I  A  + + M  +G  PDV+T+
Sbjct: 241 RDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTY 300

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
             L++ LC  G L+KA  +  +M      P+  TY   ++ +    +L+     +S M  
Sbjct: 301 TVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEA 360

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
           +G  P+ VT+ ILV ALCK G +  A   L  +          ++ T   L+        
Sbjct: 361 DGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRG---IVPNLHTYNTLISGLLNLRR 417

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +AL L+N+M    +     +Y + I+ +   GD   A   F +M KRG +P +   N 
Sbjct: 418 LDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNA 477

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
            L  L + G++ EA   +  +   G++PD ++Y  +++     G I KA + L  ML + 
Sbjct: 478 SLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEG 537

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P+  + N +ID   + G +  A+ +   +    ++  V T+N LI    + G +  A 
Sbjct: 538 CEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKAL 597

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L   M   G  P+  T+N L+   C    + LAL+++  M     +PD++TY  +I G 
Sbjct: 598 DLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGL 657

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
              G    A   + +++   L+ DH+    L
Sbjct: 658 IKEGRAGYAFWFYHQMKKF-LSPDHVTLYTL 687



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 190/428 (44%), Gaps = 9/428 (2%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           LKTM D G        D   +  +I  LC  GK+  A  L  KM      PD++T+  L+
Sbjct: 285 LKTMEDEG-----CGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLM 339

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           ++    GDLE       EM     +P+  TY   +   C+  ++D+A  +   M   GI 
Sbjct: 340 SKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIV 399

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           PN  T+N L+  L     L +A++    +  +  G A +   +  + +D Y K GD  +A
Sbjct: 400 PNLHTYNTLISGLLNLRRLDEALELFNNM--ESLGVAPT-AYSYVLFIDYYGKLGDPEKA 456

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
           L  +  M ++ I   I A N  +      G I  A   F  +   G  PD +TYN ++ C
Sbjct: 457 LDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKC 516

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
             K G++D+A+     +   G  PD I   ++I  L   G + +A +    + +  + P 
Sbjct: 517 YSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPT 576

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +N++I G G+ G L  A  +   M   G   N  TFNAL+    +  ++  A  +  
Sbjct: 577 VVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFC 636

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            M +    PDV TYN +I      G    A   Y +M ++ ++PD +T   L+ G    G
Sbjct: 637 RMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDG 695

Query: 521 NMKEAEEV 528
            +++A ++
Sbjct: 696 RVEDAIKI 703



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 189/430 (43%), Gaps = 9/430 (2%)

Query: 143 KMIQKGTVPDVL----THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
           KM+ +  +P+++    T NY++  L   G +E    V   M +   + N  TY       
Sbjct: 110 KMVSQ--LPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKAL 167

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
                + +A      M   G   N  ++N L++ L + G   +A+K    ++++      
Sbjct: 168 SIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEG---LK 224

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
             + T + LM +  +  D    + L  +M    ++ +I  Y + I      G I  A+  
Sbjct: 225 PSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGI 284

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
              M   G  PDV+TY  L++ LC  GKLD+A   Y  +  +   PD ++Y T++     
Sbjct: 285 LKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGN 344

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
           +GD+   + F   M      P+   + ++++   + G +  AF + D+M   G+  N+ T
Sbjct: 345 YGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHT 404

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N LI        + +A  L   M   G+ P  ++Y L I     LG    AL  +++M 
Sbjct: 405 YNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMK 464

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
           +RGI P I      +      G ++EA+++F  I   GL+ D + + ++ K Y +  + D
Sbjct: 465 KRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQID 524

Query: 559 KARDIHQKWL 568
           KA  +  + L
Sbjct: 525 KATKLLTEML 534



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 207/456 (45%), Gaps = 8/456 (1%)

Query: 117  DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
            D   +  +I  L   G+ G A W   +M +K   PD +T   L+  + K G +E A  ++
Sbjct: 646  DVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIV 704

Query: 177  REM---SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             E    S ++ S     +   +       E+++A+     +  N I  +      L+  L
Sbjct: 705  MEFVHQSGLQTSNQ--VWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVL 762

Query: 234  CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            CK+    DA K   +         T +  +   LMD          AL L+ +M      
Sbjct: 763  CKQKKALDAKKLFDKFTKSLGTHPTPE--SYNCLMDGLLGCNITEAALKLFVEMKNAGCC 820

Query: 294  TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             +I  YN+L++    +  I   F  + +ML RG  P++IT+N +++ L K   +++A   
Sbjct: 821  PNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDL 880

Query: 354  YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
            Y  +     +P   +Y  +I GL   G   +A +    M +    P   I+N++I+G+G+
Sbjct: 881  YYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGK 940

Query: 414  CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             G+++ A  +   M+  G+  ++ ++  L+      G + DA    +E+ L G+ PD  +
Sbjct: 941  AGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVS 1000

Query: 474  YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            YNL+I        +  AL L+ EM  RGI+P++ TY  LI      G + +A ++F ++Q
Sbjct: 1001 YNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQ 1060

Query: 534  TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
             +GL  +   +  L + + +    D+A  + +K ++
Sbjct: 1061 FMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMI 1096



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 166/393 (42%), Gaps = 39/393 (9%)

Query: 159  LVNELCKIGDLEKADHVIREMSE-MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            L+  LCK      A  +  + ++ +   P   +YN  + G    N  + AL LF  M N 
Sbjct: 758  LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817

Query: 218  GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
            G  PN  T+N+L+ A  K   + +  +   E+L         ++IT  I++ +  K+   
Sbjct: 818  GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRG---CKPNIITHNIIISALVKSNSI 874

Query: 278  FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             +AL L+ ++   +       Y  LI G    G    A   F +M      P+   YN L
Sbjct: 875  NKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNIL 934

Query: 338  LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
            +N   K G ++ A   +  + K G+ PD  SY  +++ L + G +  A  +   +    +
Sbjct: 935  INGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGL 994

Query: 398  VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
             P+   +N++I+G G+   L                                    +A S
Sbjct: 995  DPDTVSYNLMINGLGKSRRLE-----------------------------------EALS 1019

Query: 458  LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
            L  EM   GI P+++TYN LI    N G +  A ++++E+   G+ P++ TY  LI+GH 
Sbjct: 1020 LFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHS 1079

Query: 518  ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
              GN   A  VF K+  +G + +   F  L  +
Sbjct: 1080 KSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNK 1112



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 40/255 (15%)

Query: 121  HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
            H  +I  L     I  AL L  ++I     P   T+  L+  L K G  E+A  +  EM 
Sbjct: 861  HNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMP 920

Query: 181  EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            + +  PNCA YN  I G+ +   ++ A  LF  M   GIRP+  ++ ILV  L   G + 
Sbjct: 921  DYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVD 980

Query: 241  DAVKFLGEV-LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI------- 292
            DAV +  E+ L   D     D ++  ++++   K+    +AL+L+++M  + I       
Sbjct: 981  DAVHYFEELKLTGLD----PDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTY 1036

Query: 293  ----------------------------QTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
                                        + ++  YN LI G   +G+   AF+ F +M+ 
Sbjct: 1037 NALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMI 1096

Query: 325  RGFLPDVITYNTLLN 339
             G  P+  T+  L N
Sbjct: 1097 VGCSPNAGTFAQLPN 1111



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 62/128 (48%)

Query: 110  VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
            ++  +  D + +  ++  L + G++  A+    ++   G  PD +++N ++N L K   L
Sbjct: 955  IKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRL 1014

Query: 170  EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            E+A  +  EM     SP   TYNA I  +     +D+A  +F  +   G+ PN  T+N L
Sbjct: 1015 EEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNAL 1074

Query: 230  VHALCKKG 237
            +    K G
Sbjct: 1075 IRGHSKSG 1082



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 53/112 (47%)

Query: 114  LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            L+ D   +  +I  L    ++  AL L  +M  +G  P++ T+N L+      G +++A 
Sbjct: 994  LDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAG 1053

Query: 174  HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
             +  E+  M   PN  TYNA I G+ +    D+A  +F  M   G  PN  T
Sbjct: 1054 KMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGT 1105


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 211/423 (49%), Gaps = 6/423 (1%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P++ T+N ++  LC  GDL++A  +   +   + +P+C TY+  + G  + + LD AL 
Sbjct: 155 APNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALD 214

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L   M  +G++P+ V +N L+    K G     ++   +++ D    A  ++ T  +++D
Sbjct: 215 LLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPG--ARPNLATYNVMLD 272

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K G   +   +W  M   N+Q D++ Y +LI+G C +GD+  A   + +++K G + 
Sbjct: 273 GLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVI 332

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           D   YN+L+   C+ G++ EA  F+      G+  +  +Y  +I+GL   G + +A E L
Sbjct: 333 DAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIE-L 390

Query: 390 LSMLEKSV--VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
             +LEK V  +P+   +  +I G  + G  + AF+I +     G   +VF+++++I    
Sbjct: 391 WDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLC 450

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G + DA  + ++M  DG  P+   YN LI   C +     A+++Y +M   G +P +I
Sbjct: 451 NVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVI 510

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           TY  LI G C     +EA  V  ++   G   D   +  L +     K+ D A  I ++ 
Sbjct: 511 TYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI 570

Query: 568 LLR 570
           L +
Sbjct: 571 LYK 573



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 211/446 (47%), Gaps = 39/446 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+R LC  G +  A+ L   + ++   PD +T++ L+  L K   L+ A  ++ EM    
Sbjct: 164 VLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSG 223

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDA 242
             P+   YNA + G  +  E +K + ++  +  + G RPN  T+N+++  LCK G   + 
Sbjct: 224 VQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEV 283

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +    ++A++      DVIT  IL+    ++GD   A  +++++ +  +  D   YN L
Sbjct: 284 GEVWERMVANN---LQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSL 340

Query: 303 INGFCLNGDISSAFAYFCQ--------------MLKRGF--------------------- 327
           + GFC  G +  A+ ++                M+K  F                     
Sbjct: 341 VKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVAC 400

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +PD +T+ TL++ LC+ G  ++A   +     +G   D  SY ++I GLC  G +V A +
Sbjct: 401 IPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVK 460

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M +    P  HI+N +I G+ +    S+A  I   M   G S  V T+N LI    
Sbjct: 461 VYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLC 520

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +     +A S+ +EM+ +G  PD+ TY  LI    +   I  AL ++ ++L +G+  D++
Sbjct: 521 KAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVM 580

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQ 533
            +  LI G C+ G + EA  VF+ ++
Sbjct: 581 MHNILIHGLCSAGKVDEALHVFSDMK 606



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 220/498 (44%), Gaps = 47/498 (9%)

Query: 92  LILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQ-KGTV 150
           L  ++ LD    + D  P R  ++ D   + A++      G+    + +  K+++  G  
Sbjct: 203 LAKQDRLDHALDLLDEMP-RSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGAR 261

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P++ T+N +++ LCK G  ++   V   M      P+  TY   I G CR  ++D A  +
Sbjct: 262 PNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARV 321

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTILMD 269
           +S +   G+  +   +N LV   C+ G + +A KF      D  G A   ++ T  I++ 
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW-----DSAGFAGLRNLRTYNIMIK 376

Query: 270 SYFKNGDKFQALALWNDMFQKNIQ--TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
             F +G   +A+ LW D+ +K++    D V +  LI+G C NG  + AF  F +    G 
Sbjct: 377 GLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGK 435

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             DV +Y++++N LC  G+L +A   Y  + K G  P+   Y  +I G C       A  
Sbjct: 436 QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVR 495

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M +    P    +N +IDG  +      A S+   M+  G + ++ T+ +LI    
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR------- 500
               I DA S+ K++L  G+  DV  +N+LI   C+ G +  AL ++ +M  +       
Sbjct: 556 SDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615

Query: 501 -----------------------------GITPDIITYTELIKGHCARGNMKEAEEVFAK 531
                                        G+ PDII+Y   IKG C+   + E  ++  +
Sbjct: 616 VTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDE 675

Query: 532 IQTLGLAIDHIPFRILKK 549
           + + G+    I + IL +
Sbjct: 676 VLSRGIIPTVITWNILVR 693



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/460 (22%), Positives = 185/460 (40%), Gaps = 81/460 (17%)

Query: 102 KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           K ++D G  R  L T    +  ++  LC  G+      +  +M+     PDV+T+  L++
Sbjct: 253 KLVKDPG-ARPNLAT----YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIH 307

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR- 220
            LC+ GD++ A  V  E+ +     + A YN+ + G+C+   + +A   + +    G+R 
Sbjct: 308 GLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRN 367

Query: 221 ----------------------------------PNRVTHNILVHALCKKGL-------- 238
                                             P+ VT   L+H LC+ G         
Sbjct: 368 LRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIF 427

Query: 239 ---------------------------LGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
                                      L DAVK   E +  D  K  S +  +  L+  +
Sbjct: 428 EEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVY-EKMDKDGCKPNSHIYNA--LISGF 484

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            +      A+ +++ M        ++ YN LI+G C       A +   +M++ GF PD+
Sbjct: 485 CQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDI 544

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            TY +L+  L    K+D+A   +  +   G+  D + +  +I GLC  G + +A      
Sbjct: 545 TTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSD 604

Query: 392 MLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
           M EK   P P++  +N ++DG    G +  A ++   +   G+  ++ ++N  I      
Sbjct: 605 MKEKKNCP-PNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSC 663

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
             I +   L  E+L  GI P V T+N+L+ A    G I +
Sbjct: 664 DRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQV 703



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 134/290 (46%), Gaps = 3/290 (1%)

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA + L  +L  + G  + + +    +    F + D F A +L +  F + I  ++  YN
Sbjct: 104 DAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFA-SLSHGAFGRRIAPNLQTYN 162

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +++   C  GD+  A   F  + +R   PD ITY+TL+  L KQ +LD A      + ++
Sbjct: 163 IVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRS 222

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSML-EKSVVPEPHIWNVIIDGYGRCGDLSN 419
           GV PD + Y  ++ G    G+  K       ++ +    P    +NV++DG  + G    
Sbjct: 223 GVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKE 282

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
              + + M++  +  +V T+  LI    R G +  A  +  E++  G+  D   YN L+ 
Sbjct: 283 VGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVK 342

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
             C  G +  A + +D     G+  ++ TY  +IKG    G + EA E++
Sbjct: 343 GFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELW 391



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA----FSLKKEMLLDGIFPDVFTYNLL 477
           + R L    G +  + + NAL+ A  R     DA     SL        I P++ TYN++
Sbjct: 105 AFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIV 164

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           + + C  G +  A+ L+D + RR + PD ITY+ L+ G   +  +  A ++  ++   G+
Sbjct: 165 LRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGV 224

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQK 566
             D + +  L     +  E +K   +  K
Sbjct: 225 QPDVVCYNALLGGCFKAGEFEKVMRVWDK 253



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 4/132 (3%)

Query: 405 NVIIDGYGRCGDLSNA--FSIRDLMLSFG--VSSNVFTFNALILAETRGGSIFDAFSLKK 460
           N ++D + R    S+A  F       +FG  ++ N+ T+N ++ +    G +  A +L  
Sbjct: 123 NALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFD 182

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            +    + PD  TY+ L+        +  AL L DEM R G+ PD++ Y  L+ G    G
Sbjct: 183 SLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAG 242

Query: 521 NMKEAEEVFAKI 532
             ++   V+ K+
Sbjct: 243 EFEKVMRVWDKL 254


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 193/381 (50%), Gaps = 3/381 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           +  T + L  +M   G   +  T N L+N LC++  +  A  V+ +M ++   P+  T+ 
Sbjct: 101 QYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFT 160

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I G C    + +A+ LF+ MA     PN VT  ILV  LCKKG++ +A + + E + +
Sbjct: 161 TLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEA-RCVFETMTE 219

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                  ++ T   LM+ Y    +   A  ++  M  K     + +Y++LING+C +  I
Sbjct: 220 KG--VEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRI 277

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A A   QM ++  +P+ +TYNTL+  LC    L EA   +  +  +G+ P+  +Y  +
Sbjct: 278 DEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSIL 337

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           + GLC HG + +A + L SM E+ + P+  ++N++I G    G L  A  +   + + G+
Sbjct: 338 LDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGI 397

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +V T+N +I    + G   +A+ L ++M  DG  PD  +YN++I           A+Q
Sbjct: 398 RPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQ 457

Query: 493 LYDEMLRRGITPDIITYTELI 513
           L DEM+ R  + D  T+  L+
Sbjct: 458 LIDEMVGRRFSADSSTFKMLL 478



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 203/428 (47%), Gaps = 10/428 (2%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +MI     P  +     +  + K         +  +M     + N  T N  I   CR++
Sbjct: 76  RMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLS 135

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            +  A+ + S M   GI+P+ VT   L++ LC +G + +AV+   E+   D   A  + +
Sbjct: 136 HIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD---AMPNTV 192

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T TIL+D   K G   +A  ++  M +K ++ +I  YN L+NG+CL  +++ A   F  M
Sbjct: 193 TFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIM 252

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           + +G  P V +Y+ L+N  CK  ++DEA      +S+  + P+ ++Y T++QGLC    +
Sbjct: 253 VGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSL 312

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
           ++A+E    M    ++P    +++++DG  + G L  A  +   M    +  ++  +N L
Sbjct: 313 LEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNIL 372

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I      G +  A  L  ++  +GI P V TYN++I      G    A +L+ +M   G 
Sbjct: 373 IQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGF 432

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL-------KKRYRRMK 555
            PD  +Y  +I+G     +   A ++  ++     + D   F++L       +   R M+
Sbjct: 433 LPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDLESHDEIISRFMR 492

Query: 556 ESDKARDI 563
           ES + R +
Sbjct: 493 ESSQIRKM 500



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 182/364 (50%), Gaps = 3/364 (0%)

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A+  F  M +   RP+ V     + ++ KK      V    ++  D  G A +D  T
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQM--DLFGVAHNDY-T 123

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             IL++S  +      A+++ + MF+  IQ D V +  LING C  G I  A   F +M 
Sbjct: 124 LNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMA 183

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            R  +P+ +T+  L++ LCK+G + EA   +  +++ GV P+  +Y  ++ G C+  ++ 
Sbjct: 184 GRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMN 243

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A +    M+ K   P  H ++++I+GY +   +  A ++   M    +  N  T+N L+
Sbjct: 244 DASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLM 303

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                  S+ +A  L K+M   G+ P++ TY++L+   C  GH+  AL+L   M  R + 
Sbjct: 304 QGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLE 363

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PDI+ Y  LI+G    G ++ A+E+F+K+   G+      + I+ K   +   SD+A  +
Sbjct: 364 PDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKL 423

Query: 564 HQKW 567
            +K 
Sbjct: 424 FRKM 427



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 159/334 (47%), Gaps = 3/334 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D      +I  LC  G+I  A+ L  +M  +  +P+ +T   LV+ LCK G + +A 
Sbjct: 152 IQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEAR 211

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V   M+E    PN  TYNA + GYC   E++ A  +F  M   G  P+  +++IL++  
Sbjct: 212 CVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGY 271

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK   + +A   L ++    + +   + +T   LM          +A  L+  M    + 
Sbjct: 272 CKSRRIDEAKALLTQM---SEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGML 328

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++  Y++L++G C +G +  A      M +R   PD++ YN L+  +   GKL+ A   
Sbjct: 329 PNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKEL 388

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  L   G+ P   +Y  +I+GL   G   +A +    M +   +P+   +NVII G+ +
Sbjct: 389 FSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQ 448

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
             D S A  + D M+    S++  TF  L+  E+
Sbjct: 449 NQDPSTAIQLIDEMVGRRFSADSSTFKMLLDLES 482



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 137/308 (44%), Gaps = 46/308 (14%)

Query: 110 VRCTLETDYRRHV--------AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
            RC  ET   + V        A++   CL  ++  A  +   M+ KG  P V +++ L+N
Sbjct: 210 ARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILIN 269

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP 221
             CK   +++A  ++ +MSE    PN  TYN  + G C  + L +A  LF  M ++G+ P
Sbjct: 270 GYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLP 329

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           N  T++IL+  LCK G L +A+K L                                   
Sbjct: 330 NLRTYSILLDGLCKHGHLEEALKLL----------------------------------- 354

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
                M ++ ++ DIV YN+LI G  + G +  A   F ++   G  P V TYN ++  L
Sbjct: 355 ---TSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGL 411

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
            K+G  DEA   +  +   G  PD  SY  IIQG   + D   A + +  M+ +    + 
Sbjct: 412 LKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADS 471

Query: 402 HIWNVIID 409
             + +++D
Sbjct: 472 STFKMLLD 479


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 189/389 (48%), Gaps = 4/389 (1%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           DV T+N LV  LC  G +++A  V  EM  ++  P+  TYN  I G  +     +   L 
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 212 STM-ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
             M +  G+ PN VTHNI+V    K+G + +A   + +++   +   + D  T   +++ 
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMV---ESGVSPDCFTYNTMING 252

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + K G   +A  + ++M +K ++ DI   N +++  C+      A+    +  KRG++ D
Sbjct: 253 FCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILD 312

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            +TY TL+    K  + D+A   +  + K G+ P  +SY  +I+GLC+ G   +A + L 
Sbjct: 313 EVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLN 372

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            +LEK +VP+    N+II GY   G +  AF   + M+      ++FT N L+    R  
Sbjct: 373 ELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVD 432

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +  AF L    +      DV TYN +I   C  G +  A  L  +M  +   PD  TY 
Sbjct: 433 MLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYN 492

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
            +++     G  +EAE+  +K+   G A+
Sbjct: 493 AIVRALTHAGRTEEAEKFMSKLSETGQAV 521



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 193/410 (47%), Gaps = 52/410 (12%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P+ +THN +V    K G + +A   + +M E   SP+C TYN  I G+C+  +L +A
Sbjct: 203 GVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEA 262

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             +   MA  G++P+  T N ++H LC +    +A +    V A   G    +V   T++
Sbjct: 263 FRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELT--VKARKRGYILDEVTYGTLI 320

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           M  YFK   + +AL LW +M ++ I   +V+YN LI G CL+G    A     ++L++G 
Sbjct: 321 M-GYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGL 379

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +PD ++ N +++  C +G +D+A  F+  +      PD  +   +++GLC          
Sbjct: 380 VPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLC---------- 429

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
             + MLEK                        AF + +  +S   S +V T+N +I    
Sbjct: 430 -RVDMLEK------------------------AFKLFNSWISKQNSVDVVTYNTMISYLC 464

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG------ 501
           + G + +AF L  +M +    PD +TYN ++ A  + G    A +   ++   G      
Sbjct: 465 KEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTH 524

Query: 502 -------ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
                   + DI+ Y++ I   C +G  KEA ++F + +  G++++   +
Sbjct: 525 DTSQELDASSDIM-YSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTY 573



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 165/395 (41%), Gaps = 54/395 (13%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E    L+ M+  G V    E +   H  +++     GKI  A     KM++ G  PD  T
Sbjct: 190 EGFRLLEEMKSRGGV----EPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFT 245

Query: 156 HNYLVNELCKIGDLEKADHVIREMSE------------------MRPSPNCA-------- 189
           +N ++N  CK G L +A  ++ EM+                   M   P  A        
Sbjct: 246 YNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKAR 305

Query: 190 ---------TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                    TY   I GY +  + DKAL L+  M   GI P+ V++N L+  LC  G   
Sbjct: 306 KRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTD 365

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            AV  L E+L   +     D ++  I++  Y   G   +A    N M   + + DI   N
Sbjct: 366 QAVDKLNELL---EKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRN 422

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +L+ G C    +  AF  F   + +    DV+TYNT+++ LCK+G+LDEA      +   
Sbjct: 423 ILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVK 482

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG------RC 414
              PDQ +Y  I++ L   G   +A +F+  + E     + H  +  +D         + 
Sbjct: 483 KFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQI 542

Query: 415 GDLSNAFSIRDLMLSF------GVSSNVFTFNALI 443
            DL      ++ M  F      GVS N +T+  L+
Sbjct: 543 SDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLM 577



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 139/336 (41%), Gaps = 50/336 (14%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA---------- 172
            +I   C  GK+G A  +  +M +KG  PD+ T N +++ LC     E+A          
Sbjct: 248 TMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKR 307

Query: 173 ----------------------DHVIREMSEMRPS---PNCATYNAFITGYCRVNELDKA 207
                                 D  ++   EM+     P+  +YN  I G C   + D+A
Sbjct: 308 GYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQA 367

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           +   + +   G+ P+ V+ NI++H  C +G++  A +F  +++ +       D+ T  IL
Sbjct: 368 VDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNS---FKPDIFTRNIL 424

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +    +     +A  L+N    K    D+V YN +I+  C  G +  AF     M  + F
Sbjct: 425 LRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKF 484

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV------------APDQISYKTIIQG 375
            PD  TYN ++  L   G+ +EA  F   LS+TG             A   I Y   I  
Sbjct: 485 EPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISD 544

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
           LC  G   +A +      +K V    + +  ++DG+
Sbjct: 545 LCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGF 580



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 137/313 (43%), Gaps = 36/313 (11%)

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN-CLCKQGKLDEASHF 353
           D+  YN L+ G C  G I  A     +M     +PDV+TYNTL++ C   +G  +     
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             + S+ GV P+ +++  +++     G I +A + ++ M+E  V P+   +N +I+G+ +
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCK 255

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNAL-------------------------ILAETR 448
            G L  AF + D M   G+  ++ T N +                         IL E  
Sbjct: 256 AGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVT 315

Query: 449 GGSIF----------DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
            G++            A  L +EM   GI P V +YN LI   C  G    A+   +E+L
Sbjct: 316 YGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELL 375

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
            +G+ PD ++   +I G+C  G + +A +   K+       D     IL +   R+   +
Sbjct: 376 EKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLE 435

Query: 559 KARDIHQKWLLRN 571
           KA  +   W+ + 
Sbjct: 436 KAFKLFNSWISKQ 448



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 11/233 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR LCL GK   A+    ++++KG VPD ++ N +++  C  G ++KA     +M    
Sbjct: 354 LIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNS 413

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T N  + G CRV+ L+KA  LF++  +     + VT+N ++  LCK+G L +A 
Sbjct: 414 FKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAF 473

Query: 244 KFLG--EVLADDDGKATSDVITSTILMDSYFKNGDKF--------QALALWNDMFQKNIQ 293
             +   EV   +  + T + I   +      +  +KF        QA+   +   + +  
Sbjct: 474 DLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDAS 533

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           +DI+ Y+  I+  C  G    A   F +  ++G   +  TY  L++   K+ K
Sbjct: 534 SDIM-YSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFLKRRK 585



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 1/109 (0%)

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           S +V+T+N L+      G I +A  ++ EM    + PDV TYN LI             +
Sbjct: 134 SIDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFR 193

Query: 493 LYDEMLRR-GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           L +EM  R G+ P+ +T+  ++K     G + EA +   K+   G++ D
Sbjct: 194 LLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPD 242


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 215/463 (46%), Gaps = 40/463 (8%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV---------NELCKIGDL 169
           R    +I  LC  G++G A  L   M Q G VP V+T+N ++         N+  KI +L
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 348

Query: 170 -------------------------EKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
                                    E+A+ ++    +   +P   T+   I GYC   + 
Sbjct: 349 MEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 408

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D AL + + M ++  + +      L+++L KK  L +A + L E+ A+       +VIT 
Sbjct: 409 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG---LVPNVITY 465

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T ++D Y K+G    AL +   M +   Q +   YN L+ G   +  +  A A   +M K
Sbjct: 466 TSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 525

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G +P+VITY TLL   C +   D A   + ++ + G+ PD+ +Y  +   LC  G   +
Sbjct: 526 DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEE 585

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A  F++    K V      +  +IDG+ + G+   A ++ + M+  G + + +T++ L+ 
Sbjct: 586 AYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLH 642

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A  +   + +A  +  +M L GI   +F Y +LI      G    A ++Y+EM   G  P
Sbjct: 643 ALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKP 702

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
              TYT  I  +C  G +++AE++  K++  G+A D + + IL
Sbjct: 703 SATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNIL 745



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 196/443 (44%), Gaps = 22/443 (4%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I   C  GK+  AL + + M + G  P+  T+N L+  L K   L KA  ++ +M 
Sbjct: 465 YTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ 524

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  TY   + G C  ++ D A  LF  M  NG++P+   + +L  ALCK G   
Sbjct: 525 KDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAE 584

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A  F+        G A + V  +T L+D + K G+   A  L   M  +    D   Y+
Sbjct: 585 EAYSFIVR-----KGVALTKVYYTT-LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 638

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           VL++  C    ++ A     QM  RG    +  Y  L++ + ++GK D A   Y  ++ +
Sbjct: 639 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 698

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  P   +Y   I   C  G +  A + +L M  + V P+   +N++IDG G  G +  A
Sbjct: 699 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 758

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD----------------AFSLKKEMLL 464
           FS    M+      N +T+  L+    +G   +                  + L + M+ 
Sbjct: 759 FSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVK 818

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            G+ P V TY+ LI   C  G +  A  L D M  +G++P+   YT LIK  C     ++
Sbjct: 819 HGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEK 878

Query: 525 AEEVFAKIQTLGLAIDHIPFRIL 547
           A    + +   G       +R+L
Sbjct: 879 ALSFVSIMSECGFQPQLESYRLL 901



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 221/510 (43%), Gaps = 44/510 (8%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++ + D ++ +R TG  R  L    + +   +R L           +  +++Q G +PD 
Sbjct: 126 MRVSADAIQAIRRTGSARLALSP--KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDT 183

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N ++   CK GDL  A    R + E    P   T NA + GYCR  EL KA  LF  
Sbjct: 184 VTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLM 243

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G + N  ++ IL+  LC    +  A+     ++   DG  + +V   T L+    K
Sbjct: 244 MPLMGCQRNEYSYTILIQGLCDAKCVRKALVLF--LMMKRDG-CSPNVRAFTFLISGLCK 300

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           +G    A  L++ M Q  +   ++ YN +I G+   G ++ A      M K G  PD  T
Sbjct: 301 SGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWT 360

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC---------------- 377
           YNTL+  LC Q K +EA        K G  P  +++  +I G C                
Sbjct: 361 YNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMM 419

Query: 378 ---------IHGDIV----------KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
                    + G ++          +A+E L  +    +VP    +  IIDGY + G + 
Sbjct: 420 SSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVD 479

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +  +M   G   N +T+N+L+    +   +  A +L  +M  DGI P+V TY  L+
Sbjct: 480 IALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLL 539

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C+      A +L++ M + G+ PD   Y  L    C  G    AEE ++ I   G+A
Sbjct: 540 QGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVA 596

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +  + +  L   + +   +D A  + ++ +
Sbjct: 597 LTKVYYTTLIDGFSKAGNTDFAATLIERMI 626



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 204/453 (45%), Gaps = 21/453 (4%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+ LC    +  AL L   M + G  P+V    +L++ LCK G +  A  +   M 
Sbjct: 256 YTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMP 315

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG--- 237
           +    P+  TYNA I GY ++  ++ AL +   M  NG  P+  T+N L++ LC +    
Sbjct: 316 QNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEE 375

Query: 238 ---LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ-ALALWNDMFQKNIQ 293
              LL +AVK         +G  T  V+T T L++ Y    +KF  AL + N M     +
Sbjct: 376 AEELLNNAVK---------EG-FTPTVVTFTNLINGYCM-AEKFDDALRMKNKMMSSKCK 424

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+  +  LIN       +  A     ++   G +P+VITY ++++  CK GK+D A   
Sbjct: 425 LDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEV 484

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             ++ + G  P+  +Y +++ GL     + KA   L  M +  ++P    +  ++ G   
Sbjct: 485 LKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCD 544

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             D  NAF + ++M   G+  +   +  L  A  + G   +A+S    ++  G+      
Sbjct: 545 EHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVY 601

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  LI      G+   A  L + M+  G TPD  TY+ L+   C +  + EA  +  ++ 
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             G+      + IL     R  + D A+ ++ +
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 694



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 133/327 (40%), Gaps = 19/327 (5%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++  LC   ++  AL +  +M  +G    +  +  L++E+ + G  + A  + 
Sbjct: 633 DSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMY 692

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM+     P+  TY  FI  YC+   L+ A  L   M   G+ P+ VT+NIL+      
Sbjct: 693 NEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHM 752

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF----QALALWN------- 285
           G +  A   L  ++         +  T  +L+    K    +        +WN       
Sbjct: 753 GYIDRAFSTLKRMVG---ASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDIT 809

Query: 286 -----DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
                 M +  +   +  Y+ LI GFC  G +  A      M  +G  P+   Y  L+ C
Sbjct: 810 WQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKC 869

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
            C     ++A  F  ++S+ G  P   SY+ ++ GLC  GD  K +     +LE     +
Sbjct: 870 CCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHD 929

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLM 427
              W ++ DG  + G +   F +  +M
Sbjct: 930 EVAWKILNDGLLKAGYVDICFQMLSIM 956



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 29/260 (11%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +   I   C  G++  A  L  KM ++G  PDV+T+N L++    +G +++A   ++ M 
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 766

Query: 181 EMRPSPNCATYNAFI----------------TGYCRVNELDKALHLFSTMANNGIRPNRV 224
                PN  TY   +                +G   + ELD    L   M  +G+ P   
Sbjct: 767 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 826

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATS---DVITSTI--LMDSYFKNGDKFQ 279
           T++ L+   CK G L +A   L  +     GK  S   D+ T  I    D+ F      +
Sbjct: 827 TYSSLIAGFCKAGRLEEACLLLDHMC----GKGLSPNEDIYTLLIKCCCDTKFFE----K 878

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           AL+  + M +   Q  + +Y +L+ G C  GD     + FC +L+ G+  D + +  L +
Sbjct: 879 ALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILND 938

Query: 340 CLCKQGKLDEASHFYGVLSK 359
            L K G +D       ++ K
Sbjct: 939 GLLKAGYVDICFQMLSIMEK 958


>gi|302143623|emb|CBI22376.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 196/416 (47%), Gaps = 5/416 (1%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D  T+N ++  LC  G L  A  +I  M+     P   +    I G  ++   ++A  + 
Sbjct: 129 DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 188

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M  +G  P+ +T+N+LV  LCKKGLL  A++ L E+          D IT   ++   
Sbjct: 189 KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSG---CPPDAITYNTILRCM 245

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
           F +G   QA+  W D  +K     ++ Y VLI   C +     A      M   G  PD+
Sbjct: 246 FDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDI 305

Query: 332 ITYNTLLNCLCKQGKL-DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           +TYN+L+N  CKQGK  D A   Y +LS  G+ P+ ++Y T++  LC HG   +  E LL
Sbjct: 306 VTYNSLVNYTCKQGKYEDTALIIYNLLSH-GMGPNTVTYNTLLHSLCTHGYWDEVDEILL 364

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M   S  P    +N++I+G  + G L  A +  D M+S     ++ T+N L+ A  + G
Sbjct: 365 IMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEG 424

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A  L   +      P + TYN++I      G +  A++LY EM+ RG  PD IT+ 
Sbjct: 425 MVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHR 484

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
            L  G      +++A  +  ++      I +  FR +          ++A  +HQK
Sbjct: 485 TLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGMIEEANQLHQK 540



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 188/412 (45%), Gaps = 3/412 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++++LC  GK+  A  L   M ++  +P   +   L+  L K+   E+A  V++ M    
Sbjct: 136 ILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSG 195

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYN  + G C+   L  A+ L   M+ +G  P+ +T+N ++  +   G    A+
Sbjct: 196 GIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAI 255

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            F  + L        + +IT T+L++   K+    QA+ +  DM  +    DIV YN L+
Sbjct: 256 GFWKDQLRKG---CPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLV 312

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           N  C  G           +L  G  P+ +TYNTLL+ LC  G  DE      +++ T   
Sbjct: 313 NYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQP 372

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P  ++Y  +I GLC +G + +A  F   M+  + +P+   +N ++    + G +  A  +
Sbjct: 373 PTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHL 432

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              +     S  + T+N +I    + G +  A  L  EM+  G  PD  T+  L      
Sbjct: 433 LHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFR 492

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           L  +  AL +  EM +R        +  +I G CA G ++EA ++  K+  L
Sbjct: 493 LDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGMIEEANQLHQKLTEL 544



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 127/269 (47%), Gaps = 6/269 (2%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ +   M  +G  PD++T+N LVN  CK G  E    +I  +      PN  TYN  + 
Sbjct: 289 AMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLH 348

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
             C     D+   +   M      P  VT+NIL++ LCK GLL  A+ F  ++++ +   
Sbjct: 349 SLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHN--- 405

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D+IT   L+ +  K G   +AL L + +        ++ YN++I+G    G +  A 
Sbjct: 406 CLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAM 465

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             + +M++RGF PD IT+ TL   L +   +++A      ++K        +++ +I GL
Sbjct: 466 ELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGL 525

Query: 377 CIHGDIVKAREFLLSMLEKSVVPE---PH 402
           C  G I +A +    + E  V  E   PH
Sbjct: 526 CAAGMIEEANQLHQKLTELKVFREETMPH 554



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 115/234 (49%), Gaps = 3/234 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  GK      +   ++  G  P+ +T+N L++ LC  G  ++ D ++  M+     P  
Sbjct: 316 CKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTV 375

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN  I G C+   LD+A++ F  M ++   P+ +T+N L+ ALCK+G++ +A+  L  
Sbjct: 376 VTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHS 435

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           +   +D + +  +IT  I++D   K G   +A+ L+ +M ++    D + +  L  G   
Sbjct: 436 L---NDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFR 492

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
              +  A     +M KR        +  +++ LC  G ++EA+  +  L++  V
Sbjct: 493 LDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAAGMIEEANQLHQKLTELKV 546



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 2/192 (1%)

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE-PHIWNVIIDGYGRCG 415
           L  + V  D+ +   I+Q LC  G +V A   +  M  ++ +P  P   N +I G  +  
Sbjct: 121 LDGSFVGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCIN-LIRGLIKLE 179

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
               A  +  +M+  G   ++ T+N L+    + G +  A  L  EM L G  PD  TYN
Sbjct: 180 STERATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYN 239

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            ++    + G    A+  + + LR+G    +ITYT LI+  C      +A EV   +   
Sbjct: 240 TILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIE 299

Query: 536 GLAIDHIPFRIL 547
           G   D + +  L
Sbjct: 300 GCYPDIVTYNSL 311


>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 536

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 182/389 (46%), Gaps = 41/389 (10%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           TYN      C+    D A  +F  M ++GI PN      LV +  +KG L  A   L   
Sbjct: 105 TYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALL--- 161

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           L   + +    V+ S  L+++  K      A+ L+ +  +     D   +N+LI G C  
Sbjct: 162 LQSYEVEGCCMVVNS--LLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGV 219

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG-VLSKTGVAPDQIS 368
           G    A      M   G LPD++TYNTL+   CK  +L +A+  +  V S +G +PD ++
Sbjct: 220 GKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVT 279

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y ++I G C  G + +A   L  ML   + P    +NV++DGY + G++  A  IR  M+
Sbjct: 280 YTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMI 339

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA-------- 480
           SFG   +V TF +LI    R G +   F L +EM   G+FP+ FTY++LI A        
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLL 399

Query: 481 ---------------------------SCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
                                       C  G ++ A+ + +EM ++   PD IT+T LI
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILI 459

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            GHC +G M EA  +F K+  +G + D I
Sbjct: 460 IGHCMKGRMFEAVSIFHKMVAIGCSPDKI 488



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 168/337 (49%), Gaps = 2/337 (0%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N L+N L K+  +E A  +  E    +   +  T+N  I G C V + +KA+ L   M+ 
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSG 234

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G  P+ VT+N L+   CK   L  A +   +V        + DV+T T ++  Y K G 
Sbjct: 235 FGCLPDIVTYNTLIKGFCKSNELKKANEMFDDV--KSSSGCSPDVVTYTSMISGYCKAGK 292

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A  L +DM +  I    V +NVL++G+   G++ +A     +M+  G  PDV+T+ +
Sbjct: 293 MQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTS 352

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L++  C+ G++++    +  ++  G+ P+  +Y  +I  LC    ++KARE L  +  K 
Sbjct: 353 LIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKD 412

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           ++P+P ++N +IDG+ + G ++ A  I + M       +  TF  LI+     G +F+A 
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
           S+  +M+  G  PD  T + L+      G    A  L
Sbjct: 473 SIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 173/353 (49%), Gaps = 8/353 (2%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           ++  A+ L  + ++  +  D  T N L+  LC +G  EKA  ++  MS     P+  TYN
Sbjct: 186 RVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYN 245

Query: 193 AFITGYCRVNELDKALHLFSTM-ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
             I G+C+ NEL KA  +F  + +++G  P+ VT+  ++   CK G + +A   L ++L 
Sbjct: 246 TLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDML- 304

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
              G   ++V T  +L+D Y K G+   A  +   M       D+V +  LI+G+C  G 
Sbjct: 305 -RLGIYPTNV-TFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           ++  F  + +M  RG  P+  TY+ L+N LCK+ +L +A    G L+   + P    Y  
Sbjct: 363 VNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNP 422

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G C  G + +A   +  M +K   P+   + ++I G+   G +  A SI   M++ G
Sbjct: 423 VIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLK----KEMLLDGIFPDVFTYNLLIGA 480
            S +  T ++L+    + G   +A+ L     K  + DG   +  T N+ + A
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHLNQIAHKGQINDGAPLETKTANVTLAA 535



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 140/285 (49%), Gaps = 4/285 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D +    +IR LC  GK   A+ L   M   G +PD++T+N L+   CK  +L+KA+ + 
Sbjct: 205 DTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMF 264

Query: 177 REM-SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
            ++ S    SP+  TY + I+GYC+  ++ +A  L   M   GI P  VT N+LV    K
Sbjct: 265 DDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAK 324

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G +  A +  G++++        DV+T T L+D Y + G   Q   LW +M  + +  +
Sbjct: 325 AGEMHTAEEIRGKMISFG---CFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPN 381

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
              Y++LIN  C    +  A     Q+  +  +P    YN +++  CK GK++EA     
Sbjct: 382 AFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVE 441

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
            + K    PD+I++  +I G C+ G + +A      M+     P+
Sbjct: 442 EMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 140/289 (48%), Gaps = 21/289 (7%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E  D +K+     P       D   + ++I   C  GK+  A  L   M++ G  P  +T
Sbjct: 262 EMFDDVKSSSGCSP-------DVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVT 314

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
            N LV+   K G++  A+ +  +M      P+  T+ + I GYCRV ++++   L+  M 
Sbjct: 315 FNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMN 374

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL----MDSY 271
             G+ PN  T++IL++ALCK+  L  A + LG++       A+ D+I    +    +D +
Sbjct: 375 ARGMFPNAFTYSILINALCKENRLLKARELLGQL-------ASKDIIPQPFMYNPVIDGF 427

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K G   +A+ +  +M +K  + D + + +LI G C+ G +  A + F +M+  G  PD 
Sbjct: 428 CKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGV---APDQISYKTIIQGLC 377
           IT ++LL+CL K G   EA H   +  K  +   AP +     +    C
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYHLNQIAHKGQINDGAPLETKTANVTLAAC 536



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 6/403 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           + R LC  G    A  +   M   G  P+     +LV+   + G L  A  ++ +  E+ 
Sbjct: 109 LTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQSYEVE 168

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
               C   N+ +    +++ ++ A+ LF          +  T NIL+  LC  G    AV
Sbjct: 169 GC--CMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAV 226

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN-IQTDIVAYNVL 302
           + LG +          D++T   L+  + K+ +  +A  +++D+   +    D+V Y  +
Sbjct: 227 ELLGGM---SGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSM 283

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G+C  G +  A      ML+ G  P  +T+N L++   K G++  A    G +   G 
Sbjct: 284 ISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGC 343

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD +++ ++I G C  G + +       M  + + P    ++++I+   +   L  A  
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARE 403

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   + S  +    F +N +I    + G + +A  + +EM      PD  T+ +LI   C
Sbjct: 404 LLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHC 463

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
             G +  A+ ++ +M+  G +PD IT + L+      G  KEA
Sbjct: 464 MKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 166/379 (43%), Gaps = 49/379 (12%)

Query: 192 NAFITGYCRVNELDKALHL------FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           N FI+ +  V +LD   H+      FS    N IR +  T+N+L  +LCK G+  D    
Sbjct: 68  NPFIS-FEVVKKLDNNPHIGFRFWEFSRFKLN-IRHSFWTYNLLTRSLCKAGM-HDLAGQ 124

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           + E +  D     S ++    L+ S+ + G    A AL    ++             + G
Sbjct: 125 MFECMKSDGISPNSRLLG--FLVSSFAEKGKLHCATALLLQSYE-------------VEG 169

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C+                          N+LLN L K  ++++A   +    +     D
Sbjct: 170 CCM------------------------VVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCND 205

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-R 424
             ++  +I+GLC  G   KA E L  M     +P+   +N +I G+ +  +L  A  +  
Sbjct: 206 TKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFD 265

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           D+  S G S +V T+ ++I    + G + +A  L  +ML  GI+P   T+N+L+      
Sbjct: 266 DVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKA 325

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G +H A ++  +M+  G  PD++T+T LI G+C  G + +   ++ ++   G+  +   +
Sbjct: 326 GEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTY 385

Query: 545 RILKKRYRRMKESDKARDI 563
            IL     +     KAR++
Sbjct: 386 SILINALCKENRLLKAREL 404



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 3/237 (1%)

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TYN L   LCK G  D A   +  +   G++P+      ++      G +  A   LL  
Sbjct: 105 TYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQS 164

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
            E  V     + N +++   +   + +A  + +  L F   ++  TFN LI      G  
Sbjct: 165 YE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKA 222

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM-LRRGITPDIITYTE 511
             A  L   M   G  PD+ TYN LI   C    +  A +++D++    G +PD++TYT 
Sbjct: 223 EKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTS 282

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +I G+C  G M+EA  +   +  LG+   ++ F +L   Y +  E   A +I  K +
Sbjct: 283 MISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMI 339


>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g16890, mitochondrial-like
           [Cucumis sativus]
          Length = 688

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 202/450 (44%), Gaps = 23/450 (5%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L    R + AV+  L     +  A    ++M     VPD  T+N L++ +C++G +++A 
Sbjct: 225 LNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEAL 284

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++++M  +   PN  TY   I G+       +   +  TM    + PN  T   LVH +
Sbjct: 285 RLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVHGV 344

Query: 234 CKKGLLGDAVKFLGEVLADDDG-----------------KATSDVI------TSTILMDS 270
            +      A + L E +    G                  A+  V+      T  I +  
Sbjct: 345 FRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFXPSSSTFNITLAC 404

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K  D      ++++  Q  ++     Y  LI      G +     Y  +++  G + +
Sbjct: 405 VLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISN 464

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           + +YN +++CLCK   +D AS  +  L   G++P+ ++Y T+I G C +G++ KA+E L 
Sbjct: 465 IYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLE 524

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            +LE    P+   +N +IDG  +     NAF     M+ + V  NV T+N LI +    G
Sbjct: 525 MLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIG 584

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +  +  L ++M L GI PD F++N LI           A +L+D MLR GI PD  TY 
Sbjct: 585 DVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYG 644

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            LIK  C  G   +A E+F  ++  G   D
Sbjct: 645 ALIKSLCKSGRHDKAREIFLSMKENGCTPD 674



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 183/413 (44%), Gaps = 35/413 (8%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           +P    YNA +    + N LD A   F  M+++   P+R T+NIL+H +C+ G++ +A++
Sbjct: 226 NPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALR 285

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            + ++   +      +V T TIL+D +F      +   +   M ++N+  +      L++
Sbjct: 286 LMKQM---EGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVH 342

Query: 305 GF--CLNGDISSAFAYFCQMLKRG--------------------------FLPDVITYNT 336
           G   C+  D   AF    + ++R                           F P   T+N 
Sbjct: 343 GVFRCIAPD--KAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFXPSSSTFNI 400

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
            L C+ K+  L      +    ++GV P   +Y T+I+ L   G +     ++  ++   
Sbjct: 401 TLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDG 460

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           ++   + +N++ID   +   +  A  +   + + G+S N+ T+N LI    R G++  A 
Sbjct: 461 LISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQ 520

Query: 457 SLKKEMLLDGIF-PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            L  EMLL+  F PD+FT+N LI   C       A   + EM+   + P++ITY  LI  
Sbjct: 521 ELL-EMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICS 579

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            CA G++  +  +  +++  G+  D   F  L + Y       KA  +    L
Sbjct: 580 FCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSML 632



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 124/265 (46%), Gaps = 3/265 (1%)

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           +Q G  P   T+  L+  L K G +E  +  +  +       N  +YN  I   C+   +
Sbjct: 422 VQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSM 481

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D+A  +F  + N GI PN VT+N L+   C+ G +  A + L  +L   + +   D+ T 
Sbjct: 482 DRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLL---ESRFRPDIFTF 538

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
             L+D   +      A   + +M + ++  +++ YN+LI  FC  GD+S +     QM  
Sbjct: 539 NSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKL 598

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G  PD  ++N L+     + +  +A   +  + + G+ PD  +Y  +I+ LC  G   K
Sbjct: 599 HGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDK 658

Query: 385 AREFLLSMLEKSVVPEPHIWNVIID 409
           ARE  LSM E    P+ +  ++  D
Sbjct: 659 AREIFLSMKENGCTPDSYTCSLFSD 683



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 144/294 (48%), Gaps = 7/294 (2%)

Query: 186 PNCATYNAFITGYCRVNELDKALH--LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P+ +T+N  IT  C + +LD  +   +F     +G++P   T+  L+ AL K G +    
Sbjct: 393 PSSSTFN--ITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGN 450

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +++  ++ D      S++ +  +++D   K     +A  ++ D+  + I  +IV YN LI
Sbjct: 451 RYMDRLINDG---LISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLI 507

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            GFC NG++  A      +L+  F PD+ T+N+L++ LC+  K + A   +  + +  V 
Sbjct: 508 GGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVP 567

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ I+Y  +I   C  GD+ ++   L  M    + P+   +N +I GY        A  +
Sbjct: 568 PNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKL 627

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
            D ML  G+  + +T+ ALI +  + G    A  +   M  +G  PD +T +L 
Sbjct: 628 FDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSLF 681



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 11/174 (6%)

Query: 370 KTIIQGLCIHG--------DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           K +IQG+ +           ++ + + L  + E  +     +  ++   +GR G  +   
Sbjct: 155 KQLIQGVLVRNLHREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCV 214

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   +   G++     +NA++ A  +  S+  A+   ++M      PD FTYN+LI   
Sbjct: 215 EVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGV 274

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           C LG +  AL+L  +M   G  P++ TYT LI G     N K A E F  +QT+
Sbjct: 275 CRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFF---NAKRAGETFKVLQTM 325



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/283 (20%), Positives = 107/283 (37%), Gaps = 30/283 (10%)

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           F Q+   G  P    YN +++ L K   LD A   +  +S     PD+ +Y  +I G+C 
Sbjct: 217 FGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCR 276

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G + +A   +  M      P    + ++IDG+         F +   M    V  N  T
Sbjct: 277 LGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEAT 336

Query: 439 FNALI------LAETRGGSIFDAFSLKK----EMLLDGIF----------------PDVF 472
             +L+      +A  +   +   F  +K    +++ D I                 P   
Sbjct: 337 MRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFXPSSS 396

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           T+N+ +        + +   ++D  ++ G+ P   TY  LI+     G M+       ++
Sbjct: 397 TFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRL 456

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRN 571
              GL  +   + ++     + K  D+A    RD+H + +  N
Sbjct: 457 INDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPN 499



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 39/159 (24%)

Query: 114 LETDYRRHV----AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           LE+ +R  +    ++I  LC   K   A     +M++    P+V+T+N L+   C IGD+
Sbjct: 527 LESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDV 586

Query: 170 EKADHVIREMS--EMRP---------------------------------SPNCATYNAF 194
            ++ H++R+M    ++P                                  P+  TY A 
Sbjct: 587 SRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGAL 646

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           I   C+    DKA  +F +M  NG  P+  T ++    L
Sbjct: 647 IKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSLFSDTL 685


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 215/463 (46%), Gaps = 40/463 (8%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV---------NELCKIGDL 169
           R    +I  LC  G++G A  L   M Q G VP V+T+N ++         N+  KI +L
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 348

Query: 170 -------------------------EKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
                                    E+A+ ++    +   +P   T+   I GYC   + 
Sbjct: 349 MEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 408

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D AL + + M ++  + +      L+++L KK  L +A + L E+ A+       +VIT 
Sbjct: 409 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG---LVPNVITY 465

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T ++D Y K+G    AL +   M +   Q +   YN L+ G   +  +  A A   +M K
Sbjct: 466 TSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 525

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G +P+VITY TLL   C +   D A   + ++ + G+ PD+ +Y  +   LC  G   +
Sbjct: 526 DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEE 585

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A  F++    K V      +  +IDG+ + G+   A ++ + M+  G + + +T++ L+ 
Sbjct: 586 AYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLH 642

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A  +   + +A  +  +M L GI   +F Y +LI      G    A ++Y+EM   G  P
Sbjct: 643 ALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKP 702

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
              TYT  I  +C  G +++AE++  K++  G+A D + + IL
Sbjct: 703 SATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNIL 745



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 134/513 (26%), Positives = 226/513 (44%), Gaps = 50/513 (9%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRR---KMIQKGTV 150
           ++ + D ++ +R TG  R  L    + +   +R L    +     ++ R   +++Q G +
Sbjct: 126 MRVSADAIQAIRRTGSARLALSP--KCYNFALRSL---ARFDMTEYMGRVYSQLVQDGLL 180

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD +T+N ++   CK GDL  A    R + E    P   T NA + GYCR  EL KA  L
Sbjct: 181 PDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWL 240

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M   G + N  ++ IL+  LC+   + +A+     ++   DG  + +V   T L+  
Sbjct: 241 FLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLF--LMMKRDG-CSPNVRAFTFLISG 297

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K+G    A  L++ M Q  +   ++ YN +I G+   G ++ A      M K G  PD
Sbjct: 298 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC------------- 377
             TYNTL+  LC Q K +EA        K G  P  +++  +I G C             
Sbjct: 358 DWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 416

Query: 378 ------------IHGDIV----------KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
                       + G ++          +A+E L  +    +VP    +  IIDGY + G
Sbjct: 417 KMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSG 476

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            +  A  +  +M   G   N +T+N+L+    +   +  A +L  +M  DGI P+V TY 
Sbjct: 477 KVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYT 536

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            L+   C+      A +L++ M + G+ PD   Y  L    C  G    AEE ++ I   
Sbjct: 537 TLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRK 593

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+A+  + +  L   + +   +D A  + ++ +
Sbjct: 594 GVALTKVYYTTLIDGFSKAGNTDFAATLIERMI 626



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 196/443 (44%), Gaps = 22/443 (4%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I   C  GK+  AL + + M + G  P+  T+N L+  L K   L KA  ++ +M 
Sbjct: 465 YTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ 524

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  TY   + G C  ++ D A  LF  M  NG++P+   + +L  ALCK G   
Sbjct: 525 KDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAE 584

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A  F+        G A + V  +T L+D + K G+   A  L   M  +    D   Y+
Sbjct: 585 EAYSFIVR-----KGVALTKVYYTT-LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 638

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           VL++  C    ++ A     QM  RG    +  Y  L++ + ++GK D A   Y  ++ +
Sbjct: 639 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 698

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  P   +Y   I   C  G +  A + +L M  + V P+   +N++IDG G  G +  A
Sbjct: 699 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 758

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD----------------AFSLKKEMLL 464
           FS    M+      N +T+  L+    +G   +                  + L + M+ 
Sbjct: 759 FSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVK 818

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            G+ P V TY+ LI   C  G +  A  L D M  +G++P+   YT LIK  C     ++
Sbjct: 819 HGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEK 878

Query: 525 AEEVFAKIQTLGLAIDHIPFRIL 547
           A    + +   G       +R+L
Sbjct: 879 ALSFVSIMSECGFQPQLESYRLL 901



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 204/453 (45%), Gaps = 21/453 (4%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+ LC    +  AL L   M + G  P+V    +L++ LCK G +  A  +   M 
Sbjct: 256 YTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMP 315

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG--- 237
           +    P+  TYNA I GY ++  ++ AL +   M  NG  P+  T+N L++ LC +    
Sbjct: 316 QNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEE 375

Query: 238 ---LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ-ALALWNDMFQKNIQ 293
              LL +AVK         +G  T  V+T T L++ Y    +KF  AL + N M     +
Sbjct: 376 AEELLNNAVK---------EG-FTPTVVTFTNLINGYCM-AEKFDDALRMKNKMMSSKCK 424

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+  +  LIN       +  A     ++   G +P+VITY ++++  CK GK+D A   
Sbjct: 425 LDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEV 484

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             ++ + G  P+  +Y +++ GL     + KA   L  M +  ++P    +  ++ G   
Sbjct: 485 LKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCD 544

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             D  NAF + ++M   G+  +   +  L  A  + G   +A+S    ++  G+      
Sbjct: 545 EHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVY 601

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  LI      G+   A  L + M+  G TPD  TY+ L+   C +  + EA  +  ++ 
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             G+      + IL     R  + D A+ ++ +
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 694



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 133/327 (40%), Gaps = 19/327 (5%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++  LC   ++  AL +  +M  +G    +  +  L++E+ + G  + A  + 
Sbjct: 633 DSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMY 692

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM+     P+  TY  FI  YC+   L+ A  L   M   G+ P+ VT+NIL+      
Sbjct: 693 NEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHM 752

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF----QALALWN------- 285
           G +  A   L  ++         +  T  +L+    K    +        +WN       
Sbjct: 753 GYIDRAFSTLKRMVG---ASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDIT 809

Query: 286 -----DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
                 M +  +   +  Y+ LI GFC  G +  A      M  +G  P+   Y  L+ C
Sbjct: 810 WQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKC 869

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
            C     ++A  F  ++S+ G  P   SY+ ++ GLC  GD  K +     +LE     +
Sbjct: 870 CCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHD 929

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLM 427
              W ++ DG  + G +   F +  +M
Sbjct: 930 EVAWKILNDGLLKAGYVDICFQMLSIM 956



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 29/260 (11%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +   I   C  G++  A  L  KM ++G  PDV+T+N L++    +G +++A   ++ M 
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 766

Query: 181 EMRPSPNCATYNAFI----------------TGYCRVNELDKALHLFSTMANNGIRPNRV 224
                PN  TY   +                +G   + ELD    L   M  +G+ P   
Sbjct: 767 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 826

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATS---DVITSTI--LMDSYFKNGDKFQ 279
           T++ L+   CK G L +A   L  +     GK  S   D+ T  I    D+ F      +
Sbjct: 827 TYSSLIAGFCKAGRLEEACLLLDHMC----GKGLSPNEDIYTLLIKCCCDTKFFE----K 878

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           AL+  + M +   Q  + +Y +L+ G C  GD     + FC +L+ G+  D + +  L +
Sbjct: 879 ALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILND 938

Query: 340 CLCKQGKLDEASHFYGVLSK 359
            L K G +D       ++ K
Sbjct: 939 GLLKAGYVDICFQMLSIMEK 958


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 211/462 (45%), Gaps = 14/462 (3%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
            +D  + + D  P+R     D   +  +I  LC  G+I  A+ L  +M Q    PD+  +
Sbjct: 203 QVDVARDLFDKMPLR-GFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMY 257

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
             LV  LC     E+   ++R M E+   P+   Y A +   CR  +  +A  +   M  
Sbjct: 258 AALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFE 317

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G+ P  VT   +++A CK+G + DA++ L E++     K   +V T   L+  +   G 
Sbjct: 318 KGLAPCVVTCTAVINAYCKEGRMSDALRVL-ELMKLRGCKP--NVWTYNALVQGFCNEGK 374

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A+ L N M    +  D V YN+LI G C++G I SAF     M   G + D  TYN 
Sbjct: 375 VHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNA 434

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L+N LCK G+ D+A   +  L   G+ P+ +++ ++I GLC  G    A +FL  M+   
Sbjct: 435 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG 494

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI---LAETRGGSIF 453
             P+ + ++  I+   +        S    ML   V  +   +  +I   L E   G + 
Sbjct: 495 CTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVA 554

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
             +    EM+  G  PDV TY   + A C  G ++ A  +  EM + G+T D + Y  L+
Sbjct: 555 RTWG---EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLM 611

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
            GH + G    A  +  ++ ++    +   + IL +   RM+
Sbjct: 612 DGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMR 653



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 205/480 (42%), Gaps = 63/480 (13%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P   T+N ++  LC+  DL +A   +  M      P+  T+N+ I GYCR N++D A  
Sbjct: 150 APTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARD 209

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD--------DGKATSDV 261
           LF  M   G   + V++  L+  LC+ G + +AV+  GE+   D         G   ++ 
Sbjct: 210 LFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAER 269

Query: 262 ITSTILM--------------------DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
               +LM                    D   +     +A  +  +MF+K +   +V    
Sbjct: 270 GEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTA 329

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +IN +C  G +S A      M  RG  P+V TYN L+   C +GK+ +A      +   G
Sbjct: 330 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACG 389

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V PD ++Y  +I+G CI G I  A   L  M    ++ + + +N +I+   + G    A 
Sbjct: 390 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 449

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           S+ D + + G+  N  TFN+LI    + G    A+   ++M+  G  PD +TY+  I   
Sbjct: 450 SLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHL 509

Query: 482 CNLGHIHLALQLYDEMLRR-----------------------------------GITPDI 506
           C +      L    EML++                                   G  PD+
Sbjct: 510 CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDV 569

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +TYT  ++ +C  G + EAE V  ++   G+ +D + +  L   +  + ++D A  I ++
Sbjct: 570 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 629



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/556 (24%), Positives = 229/556 (41%), Gaps = 95/556 (17%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L  L+ M++ G          R + AV+   C   K   A  + ++M +KG  P V+
Sbjct: 271 EEGLLMLRRMKELG-----WRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVV 325

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T   ++N  CK G +  A  V+  M      PN  TYNA + G+C   ++ KA+ L + M
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 385

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G+ P+ VT+N+L+   C  G +  A + L   L + DG   +D  T   L+++  K+
Sbjct: 386 RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR--LMEGDG-LIADQYTYNALINALCKD 442

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   QA +L++ +  + I+ + V +N LING C +G    A+ +  +M+  G  PD  TY
Sbjct: 443 GRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTY 502

Query: 335 NTLLNCLCKQGKLDEASHF----------------------------YGVLSKT------ 360
           ++ +  LCK     E   F                            YG++++T      
Sbjct: 503 SSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVS 562

Query: 361 -GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G  PD ++Y T ++  CI G + +A   L+ M +  V  +   +N ++DG+   G   +
Sbjct: 563 SGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDH 622

Query: 420 AFSIRDLMLSFGVSSNVFTFNAL------------ILAETRGG-----SIFDAFSLKKEM 462
           A SI   M S     N FT+  L            +L  T  G      + D F L   M
Sbjct: 623 AVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVM 682

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD--------------------------- 495
             +   P+  TY+ ++      G    A  L                             
Sbjct: 683 KKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRY 742

Query: 496 --------EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
                    M++ G  P +++Y  L+ G    G   +A+E+F   +    + D I ++++
Sbjct: 743 LDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVI 802

Query: 548 KKRYRRMKESDKARDI 563
                +   SD +R++
Sbjct: 803 IDGLIKKGHSDISREM 818



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 167/377 (44%), Gaps = 7/377 (1%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P+P   TYNA I   CR  +L +AL   S M  +G RP+  T N L+   C+   +  A 
Sbjct: 149 PAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVAR 208

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               ++      +   DV++   L++   + G   +A+ L+ +M Q     D+  Y  L+
Sbjct: 209 DLFDKMPLRGFAQ---DVVSYATLIEGLCEAGRIDEAVELFGEMDQP----DMHMYAALV 261

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C             +M + G+ P    Y  +++  C++ K  EA      + + G+A
Sbjct: 262 KGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLA 321

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P  ++   +I   C  G +  A   L  M  +   P    +N ++ G+   G +  A ++
Sbjct: 322 PCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTL 381

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            + M + GV+ +  T+N LI  +   G I  AF L + M  DG+  D +TYN LI A C 
Sbjct: 382 LNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 441

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G    A  L+D +  RGI P+ +T+  LI G C  G    A +   K+ + G   D   
Sbjct: 442 DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYT 501

Query: 544 FRILKKRYRRMKESDKA 560
           +    +   +MK S + 
Sbjct: 502 YSSFIEHLCKMKGSQEG 518



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 131/269 (48%), Gaps = 19/269 (7%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+  G  PDV+T+   +   C  G L +A++V+ EMS+   + +   YN  + G+  + 
Sbjct: 559 EMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIG 618

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF----------------L 246
           + D A+ +   M +    PN+ T+ IL+  L +  L+ D +                  L
Sbjct: 619 QTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGL 678

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            +V+  ++    S   +S  +++ + ++G   +A +L + M + +I  +   Y  L+  F
Sbjct: 679 FDVMKKNEFLPNSGTYSS--ILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCF 736

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C +     A+   C M++ GF+P +++Y  LL+ L  +G+ D+A   +        +PD+
Sbjct: 737 CKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDE 796

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           I +K II GL   G    +RE ++ MLE+
Sbjct: 797 IVWKVIIDGLIKKGHSDISREMII-MLER 824



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/277 (20%), Positives = 110/277 (39%), Gaps = 20/277 (7%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +   +R  C+ G++  A  +  +M + G   D + +N L++    IG  + A  ++
Sbjct: 568 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 627

Query: 177 REMSEMRPSPNCATYNAFI-----------------TGYCRVNELDKALHLFSTMANNGI 219
           ++M+ +   PN  TY   +                  G  +  EL     LF  M  N  
Sbjct: 628 KQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEF 687

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            PN  T++ ++    + G   +A   +  ++ +D      D+ T+  L+  + K+     
Sbjct: 688 LPNSGTYSSILEGFSEDGRTEEATSLVS-LMKEDSISLNEDIYTA--LVTCFCKSKRYLD 744

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  L   M Q      +++Y  L++G    G    A   F     + + PD I +  +++
Sbjct: 745 AWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIID 804

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            L K+G  D +     +L +    P   +Y  + + L
Sbjct: 805 GLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 841


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 192/420 (45%), Gaps = 3/420 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           L L G    AL + ++MI +G  P + T++ L+  L + GD  K  +++ EM  +   PN
Sbjct: 210 LLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPN 269

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY   I    R   +D A  +F  M + G  P+ +T+ +L+ ALC  G L  A +   
Sbjct: 270 IYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYV 329

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           ++ A      + D +T   LMD + K GD       WN+M       D+V Y +LI   C
Sbjct: 330 KMRASSH---SPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALC 386

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            +GD+  AF     M  +G  P++ TYNT++  L K  +LDEA      +   GV P   
Sbjct: 387 KSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAF 446

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           SY   I      GD  KA +   +M ++ ++P     N  +      G +S A  I + +
Sbjct: 447 SYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDL 506

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              G+S +  T+N L+   ++ G I  A  L  EM+  G  PDV   N LI      G +
Sbjct: 507 HKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRV 566

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A +++  +    + P ++TY  L+ G    G + +A E+F  +   G   + I F  L
Sbjct: 567 DAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSL 626



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 208/427 (48%), Gaps = 4/427 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           ++ + + L + G IG A +  RKM + G + +  ++N L++ L   G   +A  V + M 
Sbjct: 169 YMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLP-GFCNEALKVYKRMI 227

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  TY+A +    R  +  K ++L   M + G+RPN  T+ I + AL +   + 
Sbjct: 228 SEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRID 287

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA     E+  DD+G    DVIT T+L+D+    G   +A  L+  M   +   D V Y 
Sbjct: 288 DAWGIFKEM--DDEG-CGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYI 344

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            L++ F   GD+ +   ++ +M   G+ PDV+TY  L+  LCK G +D A     V++  
Sbjct: 345 TLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTK 404

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P+  +Y T+I GL     + +A E L +M    V P    + + ID YG+ GD + A
Sbjct: 405 GIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKA 464

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
               + M   G+  ++   NA +      G I +A  +  ++   G+ PD  TYN+L+  
Sbjct: 465 IDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKC 524

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
               G I  A QL  EM+ +G  PD++    LI      G +  A ++F +++ L LA  
Sbjct: 525 YSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPT 584

Query: 541 HIPFRIL 547
            + + IL
Sbjct: 585 VVTYNIL 591



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 171/341 (50%), Gaps = 3/341 (0%)

Query: 148  GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
            G  P + ++N L++ L      EKA  +  +M      PN  TYN  +  + +   ++K 
Sbjct: 791  GIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKL 850

Query: 208  LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
              L+S M + G  PN +THNI++ AL K   L  A+    E+++   G  +    T   L
Sbjct: 851  YDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMS---GDFSPTPCTYGPL 907

Query: 268  MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
            +D   K G   QA+ ++ +M       + V YN+LINGF  +G+I  A   F +M+K G 
Sbjct: 908  IDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGI 967

Query: 328  LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             PD+ +Y  L+ CLC  G++DEA  ++  L  TG+ PD +SY  II GL     + +A  
Sbjct: 968  RPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALS 1027

Query: 388  FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
                M  + + P+ + +N +I   G  G +  A  + + +   G+  +VFT+NALI   +
Sbjct: 1028 LFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHS 1087

Query: 448  RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
              G+   AFS+ K+M++ G  P+  T+  L       G +H
Sbjct: 1088 LSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVH 1128



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 222/479 (46%), Gaps = 14/479 (2%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           ++ L+ M+  G     L  +   +   IR L    +I  A  + ++M  +G  PDV+T+ 
Sbjct: 255 MNLLEEMKSIG-----LRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYT 309

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            L++ LC  G L+KA  +  +M     SP+  TY   +  + +V +L+     ++ M  +
Sbjct: 310 VLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVD 369

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G  P+ VT+ IL+ ALCK G +  A   L +V+         ++ T   ++    K    
Sbjct: 370 GYAPDVVTYTILIEALCKSGDVDRAFDML-DVMTTKG--IFPNLHTYNTMICGLLKARRL 426

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +AL L  +M    ++    +Y + I+ +  +GD + A   F  M KRG +P +   N  
Sbjct: 427 DEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNAS 486

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           L  L + G++ EA   +  L K G++PD ++Y  +++     G I KA + L  M+ K  
Sbjct: 487 LYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGC 546

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P+  I N +I+   + G +  A+ +   + +  ++  V T+N L+    + G I  A  
Sbjct: 547 EPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALE 606

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L   M   G  P+  T+N L+        + LAL+++  M      PD++TY  +I G  
Sbjct: 607 LFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLI 666

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKESDKA--RDIHQKWLLRN 571
             G +  A   F +++   L+ D++    L     R+ R++++ K     +HQ  L  N
Sbjct: 667 REGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTN 724



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 172/355 (48%), Gaps = 4/355 (1%)

Query: 159  LVNELCKIGDLEKADHVIREMSE-MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            L+  LCK      A +V  + ++ +   P   +YN  + G    N  +KAL LF  M + 
Sbjct: 766  LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825

Query: 218  GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
            G  PN  T+N+L+ A  K   +        E+ +        + IT  I++ +  K+ + 
Sbjct: 826  GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRG---CEPNAITHNIIISALVKSNNL 882

Query: 278  FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             +AL L+ ++   +       Y  LI+G    G    A   F +ML  G  P+ + YN L
Sbjct: 883  NKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNIL 942

Query: 338  LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
            +N   K G++D A   +  + K G+ PD  SY  +++ LCI G I +A ++   +    +
Sbjct: 943  INGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGL 1002

Query: 398  VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
             P+   +N II+G G+   L  A S+   M + G+S +++T+NALIL     G +  A  
Sbjct: 1003 DPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVK 1062

Query: 458  LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            + +E+ L G+ P VFTYN LI      G+   A  ++ +M+  G +P+  T+ +L
Sbjct: 1063 MYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 187/424 (44%), Gaps = 47/424 (11%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFI----TGYC 199
           M +K    ++ T+  +   L   G + +A   +R+M+E+    N  +YN  I     G+C
Sbjct: 157 MQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFC 216

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
                ++AL ++  M + G++P+  T++ L+ AL ++G                      
Sbjct: 217 -----NEALKVYKRMISEGMKPSMKTYSALMVALGRRG---------------------- 249

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
                           D  + + L  +M    ++ +I  Y + I        I  A+  F
Sbjct: 250 ----------------DTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIF 293

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M   G  PDVITY  L++ LC  GKLD+A   Y  +  +  +PD+++Y T++      
Sbjct: 294 KEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKV 353

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           GD+   + F   M      P+   + ++I+   + GD+  AF + D+M + G+  N+ T+
Sbjct: 354 GDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTY 413

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N +I    +   + +A  L + M   G+ P  F+Y L I      G    A+  ++ M +
Sbjct: 414 NTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKK 473

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
           RGI P I      +      G + EAE++F  +   GL+ D + + +L K Y +  + DK
Sbjct: 474 RGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDK 533

Query: 560 ARDI 563
           A  +
Sbjct: 534 ATQL 537



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 153/320 (47%), Gaps = 3/320 (0%)

Query: 137  ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
            AL L   M   GT P+  T+N L++   K   + K   +  EM      PN  T+N  I+
Sbjct: 815  ALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIIS 874

Query: 197  GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
               + N L+KAL L+  + +    P   T+  L+  L K G    A+K   E+L  D G 
Sbjct: 875  ALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEML--DYGC 932

Query: 257  ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              + VI + IL++ + K+G+   A  L+  M ++ I+ D+ +Y +L+   C+ G I  A 
Sbjct: 933  GPNSVIYN-ILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAV 991

Query: 317  AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             YF ++   G  PD ++YN ++N L K  +LDEA   +  +   G++PD  +Y  +I  L
Sbjct: 992  QYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHL 1051

Query: 377  CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
             I G +  A +    +    + P    +N +I G+   G+   AFS+   M+  G S N 
Sbjct: 1052 GIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNT 1111

Query: 437  FTFNALILAETRGGSIFDAF 456
             TF  L     R G + + F
Sbjct: 1112 ETFAQLPNKYPRAGLVHNPF 1131



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 123/507 (24%), Positives = 210/507 (41%), Gaps = 70/507 (13%)

Query: 132  GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
            GKI  AL L   M + G  P+ +T N L++ L K   ++ A  +   M+ M  +P+  TY
Sbjct: 599  GKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTY 658

Query: 192  NAFITGYCRVNELDKALHLFS--------------TMANNGIRPNRVTHNI-----LVHA 232
            N  I G  R   +D A   F               T+    +R  RV   I      VH 
Sbjct: 659  NTIIYGLIREGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQ 718

Query: 233  LC----------------KKGLLGDAVKFLGEVLA------DD----------------- 253
             C                 +  + +A+ F  E+L       DD                 
Sbjct: 719  ACLQTNSQFWGELMECILTEAEIEEAISF-AEILVCNSVCQDDHVMLPLIKVLCKRKKAL 777

Query: 254  DGKATSDVITSTI-----------LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            D +   D  T  +           LMD    +    +AL L+ DM       +   YN+L
Sbjct: 778  DAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLL 837

Query: 303  INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            ++    +  I+  +  + +M  RG  P+ IT+N +++ L K   L++A   Y  L     
Sbjct: 838  LDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDF 897

Query: 363  APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            +P   +Y  +I GL   G   +A +    ML+    P   I+N++I+G+G+ G++  A  
Sbjct: 898  SPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACE 957

Query: 423  IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
            +   M+  G+  ++ ++  L+      G I +A    +E+ L G+ PD  +YN +I    
Sbjct: 958  LFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLG 1017

Query: 483  NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
                +  AL L+ EM  RGI+PD+ TY  LI      G +  A +++ ++Q +GL     
Sbjct: 1018 KSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVF 1077

Query: 543  PFRILKKRYRRMKESDKARDIHQKWLL 569
             +  L + +      D+A  + +K ++
Sbjct: 1078 TYNALIRGHSLSGNKDQAFSVFKKMMV 1104



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 108/257 (42%), Gaps = 37/257 (14%)

Query: 311 DISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           D +SAF+YF  + +   F+      N +L  L +Q ++++    + ++ K  +  +  +Y
Sbjct: 110 DPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTY 169

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            TI + L I G I +A                                   F++R  M  
Sbjct: 170 MTIFKALSIKGGIGRA----------------------------------PFALRK-MTE 194

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G   N +++N LI      G   +A  + K M+ +G+ P + TY+ L+ A    G    
Sbjct: 195 VGFILNAYSYNGLI-HLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRK 253

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
            + L +EM   G+ P+I TYT  I+       + +A  +F ++   G   D I + +L  
Sbjct: 254 IMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLID 313

Query: 550 RYRRMKESDKARDIHQK 566
                 + DKA++++ K
Sbjct: 314 ALCAAGKLDKAKELYVK 330



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 58/126 (46%)

Query: 114  LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            L+ D   +  +I  L    ++  AL L  +M  +G  PD+ T+N L+  L   G ++ A 
Sbjct: 1002 LDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAV 1061

Query: 174  HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
             +  E+  +   P+  TYNA I G+      D+A  +F  M   G  PN  T   L +  
Sbjct: 1062 KMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKY 1121

Query: 234  CKKGLL 239
             + GL+
Sbjct: 1122 PRAGLV 1127


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 219/465 (47%), Gaps = 10/465 (2%)

Query: 85  AVFNALDLI--LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRR 142
            +F AL +   L++    L  MR  G V      +   H+ +    C     G AL + R
Sbjct: 162 TIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFC-----GEALEVYR 216

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+ +G  P + T++ L+  L K  D E    +++EM ++   PN  T+   I    R  
Sbjct: 217 RMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           ++D+A  +F  M + G  P+ VT+ +L+ ALC  G L +A +   ++ A+  G     VI
Sbjct: 277 KIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKAN--GHKPDQVI 334

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             T L+D +   GD       W+ M       D+V + +L++  C   D   AFA F  M
Sbjct: 335 YIT-LLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVM 393

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            K+G LP++ TYNTL+  L + G++++A      +   GV P   +Y T I      G+ 
Sbjct: 394 RKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGET 453

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            KA E    M  K +VP     N  +      G L  A ++ + +   G++ +  T+N +
Sbjct: 454 GKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMM 513

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +   ++ G + +A +L  EM+ +G  PDV   N LI +    G +  A Q++D M    +
Sbjct: 514 MKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKL 573

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +P ++TY  L+ G    G +++A E+F  +     + + I F  L
Sbjct: 574 SPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTL 618



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 217/454 (47%), Gaps = 3/454 (0%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   ++ + + L + G +     +  KM + G V +  ++N L++ L + G   +A  V 
Sbjct: 156 DLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVY 215

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           R M      P+  TY+A +    +  + +  + L   M + G+RPN  T  I +  L + 
Sbjct: 216 RRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRA 275

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A +    +  DD+G    D++T T+L+D+    G    A  L+  M     + D 
Sbjct: 276 GKIDEAYEIFRRM--DDEG-CGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  L++ F   GD+ +   ++ QM   G++PDV+T+  L++ LCK    DEA   + V
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + K G+ P+  +Y T+I GL   G I  A + L +M    V P  + +   ID +G+ G+
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGE 452

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
              A    + M + G+  N+   NA + +    G + +A ++   +  +G+ PD  TYN+
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           ++     +G +  A+ L  EM+R G  PD+I    LI      G + EA ++F +++ + 
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           L+   + +  L     +     KA ++ +  + +
Sbjct: 573 LSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXK 606



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 197/452 (43%), Gaps = 29/452 (6%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           LK M D G     L  +       IR L   GKI  A  + R+M  +G  PD++T+  L+
Sbjct: 250 LKEMEDLG-----LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLI 304

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           + LC  G LE A  +  +M      P+   Y   +  +    +LD     +S M  +G  
Sbjct: 305 DALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYM 364

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI----------TSTILMDS 270
           P+ VT  ILV  LCK      A  F       D+  AT DV+          T   L+  
Sbjct: 365 PDVVTFTILVDVLCK------ARDF-------DEAFATFDVMRKQGILPNLHTYNTLICG 411

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             + G    AL L + M    +Q     Y   I+ F  +G+   A   F +M  +G +P+
Sbjct: 412 LLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPN 471

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           ++  N  L  L + G+L EA   +  L + G+APD ++Y  +++     G + +A   L 
Sbjct: 472 IVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLS 531

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M+     P+  + N +ID   + G +  A+ + D M    +S  V T+N L+    + G
Sbjct: 532 EMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEG 591

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            +  A  L + M+     P+  ++N L+   C    + LAL+++ +M      PD++TY 
Sbjct: 592 RVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYN 651

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            +I G      +  A   F +++   +  DH+
Sbjct: 652 TVIYGLIKENKVNHAFWFFHQLKK-SMHPDHV 682



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 186/361 (51%), Gaps = 4/361 (1%)

Query: 122  VAVIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
            + ++R LC   +   A  +  K  +K G  P + ++N L+ EL ++   EKA  + ++M 
Sbjct: 756  IPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMK 815

Query: 181  EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
             +  +P+  T+N  +  + +  ++ +   L+  M +   +P+ +T+NI++ +L K   L 
Sbjct: 816  NVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLD 875

Query: 241  DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
             A+ F  ++++ D         T   L+D   K G   +A+ L+ +M     + +   +N
Sbjct: 876  KALDFFYDLVSSDFRPTPR---TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932

Query: 301  VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +LING+   GD  +A   F +M+  G  PD+ +Y  L++CLC  G++DEA +++  L  T
Sbjct: 933  ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992

Query: 361  GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            G+ PD I+Y  II GL     + +A      M  + +VP+ + +N ++   G  G +  A
Sbjct: 993  GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052

Query: 421  FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
              + + +   G+  +VFT+NALI   +   +   A+++ K M++DG  P++ TY  L   
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPNQ 1112

Query: 481  S 481
            S
Sbjct: 1113 S 1113



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 202/457 (44%), Gaps = 10/457 (2%)

Query: 117  DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
            D   +  VI  L    K+  A W   ++ +K   PD +T   L+  L K G +  A  + 
Sbjct: 646  DVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIA 704

Query: 177  RE-MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
            R+ M ++R   N + +   + G     E+DKA+     +  NGI         LV  LCK
Sbjct: 705  RDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCK 764

Query: 236  KGLLGDAVKFLGEV---LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
                  A +   +    L      A+ + +   +L   Y +     +A  L+ DM     
Sbjct: 765  HKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTE-----KAWDLFKDMKNVGC 819

Query: 293  QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
              D   +N+L+     +G I+  F  + +M+ R   PD ITYN +++ L K   LD+A  
Sbjct: 820  APDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALD 879

Query: 353  FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            F+  L  +   P   +Y  +I GL   G + +A      M +    P   I+N++I+GYG
Sbjct: 880  FFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYG 939

Query: 413  RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
            + GD   A  +   M++ G+  ++ ++  L+      G + +A     E+   G+ PD  
Sbjct: 940  KIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFI 999

Query: 473  TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
             YN +I        +  AL LY+EM  RGI PD+ TY  L+      G +++A+ ++ ++
Sbjct: 1000 AYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEEL 1059

Query: 533  QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
            Q  GL  D   +  L + Y   +  + A  +++  ++
Sbjct: 1060 QLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMV 1096



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 160/329 (48%), Gaps = 5/329 (1%)

Query: 185  SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            SP  A+YN  I     V+  +KA  LF  M N G  P+  T N+L+    K G + +  +
Sbjct: 785  SPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFE 844

Query: 245  FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
               E+++    +   D IT  I++ S  K+ +  +AL  + D+   + +     Y  LI+
Sbjct: 845  LYKEMISR---RCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID 901

Query: 305  GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
            G    G +  A   F +M   G  P+   +N L+N   K G  + A   +  +   G+ P
Sbjct: 902  GLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRP 961

Query: 365  DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
            D  SY  ++  LC+ G + +A  +   +    + P+   +N II+G G+   +  A ++ 
Sbjct: 962  DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1021

Query: 425  DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI-GASCN 483
            + M + G+  +++T+N+L+L     G +  A  + +E+ L G+ PDVFTYN LI G S +
Sbjct: 1022 NEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLS 1081

Query: 484  LGHIHLALQLYDEMLRRGITPDIITYTEL 512
                H A  +Y  M+  G  P+I TY +L
Sbjct: 1082 ENPEH-AYTVYKNMMVDGCNPNIGTYAQL 1109



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 3/250 (1%)

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           D+++ F +   M K+    D+ TY T+   L  +G L + +     + K G   +  SY 
Sbjct: 140 DMAAVFEF---MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +I  L   G   +A E    M+ + + P    ++ ++   G+  D      +   M   
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+  NV+TF   I    R G I +A+ + + M  +G  PD+ TY +LI A CN G +  A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
            +L+ +M   G  PD + Y  L+      G++   +E +++++  G   D + F IL   
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376

Query: 551 YRRMKESDKA 560
             + ++ D+A
Sbjct: 377 LCKARDFDEA 386



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 1/272 (0%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNI-QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            M  + +  DK + +A   +  QK I + D+  Y  +     + G +        +M K 
Sbjct: 127 FMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKA 186

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           GF+ +  +YN L++ L + G   EA   Y  +   G+ P   +Y  ++  L    D    
Sbjct: 187 GFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMV 246

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
              L  M +  + P  + + + I   GR G +  A+ I   M   G   ++ T+  LI A
Sbjct: 247 MVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDA 306

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
               G + +A  L  +M  +G  PD   Y  L+    + G +    + + +M   G  PD
Sbjct: 307 LCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPD 366

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           ++T+T L+   C   +  EA   F  ++  G+
Sbjct: 367 VVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 5/131 (3%)

Query: 96   ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
            E L     ++ TG     L+ D+  +  +I  L    ++  AL L  +M  +G VPD+ T
Sbjct: 981  EALYYFNELKSTG-----LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYT 1035

Query: 156  HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
            +N L+  L   G +E+A  +  E+      P+  TYNA I GY      + A  ++  M 
Sbjct: 1036 YNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMM 1095

Query: 216  NNGIRPNRVTH 226
             +G  PN  T+
Sbjct: 1096 VDGCNPNIGTY 1106



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 58/119 (48%)

Query: 114  LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
            +  D + +  ++  LCL G++  AL+   ++   G  PD + +N ++N L K   +E+A 
Sbjct: 959  IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018

Query: 174  HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             +  EM      P+  TYN+ +        +++A  ++  +   G+ P+  T+N L+  
Sbjct: 1019 ALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 192/381 (50%), Gaps = 4/381 (1%)

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGI-RPNRVTHNILVHALCKKGLLGDAVKF 245
           N  T+   I G    N++  A+HLF  +    I  PN V +  +++ LCKKG    A   
Sbjct: 141 NEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDL 200

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L  +   + G    +  T TI++D++ K+G    A +L N+M QK+I  DI  Y+ LI+ 
Sbjct: 201 LRLM---EQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDA 257

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C      +    F +M+     P+V T+N++++ LCK+GK+++A      + + GV PD
Sbjct: 258 LCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPD 317

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            I+Y  II G  + G + +ARE   SM+ KS+ P+   +N++I+GY R   +  A  +  
Sbjct: 318 VITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCR 377

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            +   G+  ++ T N L+      G    A +   EML  G  PD++T+  L+G     G
Sbjct: 378 EISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNG 437

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  A+  + ++ RR    +I  YT +I G C  G + +A   F K+  +GL  D I + 
Sbjct: 438 LVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYT 497

Query: 546 ILKKRYRRMKESDKARDIHQK 566
            +   Y +    D+A+D+ +K
Sbjct: 498 AMISGYCQEGLLDEAKDMLRK 518



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 192/411 (46%), Gaps = 4/411 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
            +IR L    K+  A+ L +K++++    P+ + +  ++N LCK G  +KA  ++R M +
Sbjct: 147 TLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQ 206

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               PN  TY   I  +C+   LD A  L + M    I P+  T++ L+ ALCK     +
Sbjct: 207 GSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWEN 266

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
                 E++  +      +V T   ++D   K G    A  +   M +K +  D++ YN+
Sbjct: 267 VRTLFLEMIHLN---IYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNM 323

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +I+G+ L G +  A   F  M+ +   PD+I+YN L+N   +Q K+DEA      +S+ G
Sbjct: 324 IIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKG 383

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + P  ++   ++ GL   G    A+ F   ML    +P+ +    ++ GY + G +  A 
Sbjct: 384 LKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAM 443

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           S    +      +N+  + A+I    + G +  A +  +++ L G+ PDV TY  +I   
Sbjct: 444 SHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGY 503

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           C  G +  A  +  +M   G   D  TY  +++G      + E +    +I
Sbjct: 504 CQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEI 554



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 148/287 (51%), Gaps = 3/287 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +VI  LC  GK+  A  + R MI+KG  PDV+T+N +++     G +++A  +   M   
Sbjct: 288 SVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINK 347

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  +YN  I GY R  ++D+A+ +   ++  G++P+ VT N+L+H L + G    A
Sbjct: 348 SIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSA 407

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
             F  E+L+        D+ T   L+  YFKNG   +A++ ++ + ++   T+I  Y  +
Sbjct: 408 QNFFDEMLS---AGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAV 464

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C NG +  A A F ++   G  PDVITY  +++  C++G LDEA      +   G 
Sbjct: 465 IDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGC 524

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
             D  +Y  I++G      + + + FL  +  KS   E     +++D
Sbjct: 525 LADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 155/306 (50%), Gaps = 3/306 (0%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           ++  D   +  +I  LC   +      L  +MI     P+V T N +++ LCK G +E A
Sbjct: 243 SIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDA 302

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
           + ++R M E    P+  TYN  I GY    ++D+A  +F +M N  I P+ +++NIL++ 
Sbjct: 303 EEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILING 362

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
             ++  + +A++   E+     G   S ++T  +L+   F+ G    A   +++M     
Sbjct: 363 YARQKKIDEAMQVCREI--SQKGLKPS-IVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D+  +  L+ G+  NG +  A ++F ++ +R    ++  Y  +++ LCK GKLD+A  
Sbjct: 420 IPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHA 479

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            +  L   G+ PD I+Y  +I G C  G + +A++ L  M +   + +   +NVI+ G+ 
Sbjct: 480 TFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFL 539

Query: 413 RCGDLS 418
           R   +S
Sbjct: 540 RSNKVS 545



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 5/154 (3%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   H  ++      G +  A+    K+ ++    ++  +  +++ LCK G L+KA    
Sbjct: 422 DLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATF 481

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            ++  +   P+  TY A I+GYC+   LD+A  +   M +NG   +  T+N++V    + 
Sbjct: 482 EKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRS 541

Query: 237 GLLGDAVKFLGEVLADDDGKATS-DVITSTILMD 269
             + +   FL E+     GK+ S +  T  +LMD
Sbjct: 542 NKVSEMKAFLEEIA----GKSFSFEAATVELLMD 571



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 57/116 (49%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           +T+ + + AVI  LC  GK+  A     K+   G  PDV+T+  +++  C+ G L++A  
Sbjct: 455 DTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKD 514

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           ++R+M +     +  TYN  + G+ R N++ +       +A         T  +L+
Sbjct: 515 MLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLM 570


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 216/446 (48%), Gaps = 22/446 (4%)

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
            TA+ L   M  KG VP  +T N L+N  C +G ++ A  V+ ++ +    PN  T+   
Sbjct: 71  ATAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTL 130

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK--GLLGDAVKFLGEVLAD 252
           + G+C  +++  AL+++  M    IR + V +  L++ LCK   G    AV+ L ++  +
Sbjct: 131 MKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKM--E 188

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI--------- 303
           +      ++I    ++    K+G+  +A  L + M  + I  DI  Y+ LI         
Sbjct: 189 ERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQR 248

Query: 304 -------NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
                  NGFCLN  +  A   F  M++RG   D+I YN L+N  C   K+ EA   + +
Sbjct: 249 KEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHM 308

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + + G  PD I+Y  ++ G C+   + +AR     M+E+ +VP+   +N++I GY +   
Sbjct: 309 MVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFER 368

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM-LLDGIFPDVFTYN 475
           +  A ++ + M    +  N+ T+N+++    + G I DA+ L  EM       PDV TYN
Sbjct: 369 VGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYN 428

Query: 476 LLIGASCNLGHIHLALQLYDEML-RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           +L+ + C +  +  A+  +  ++  R   P++ +Y  LI G C    + EA  +F  +  
Sbjct: 429 ILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCF 488

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKA 560
             L  D + + IL       ++ DKA
Sbjct: 489 KNLVPDIVTYNILLDALFNGQQLDKA 514



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 213/430 (49%), Gaps = 27/430 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCK--IGDLEKADHVIREMS 180
            +++  C+  K+  AL++  +M+ +    D + +  L+N LCK  IG    A  ++++M 
Sbjct: 129 TLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKME 188

Query: 181 EMR-PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
           E +   PN   YN  + G C+   +++A  L S M   GI P+  T++ L++ LC+ G  
Sbjct: 189 ERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQR 248

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +                       T L++ +  N    +A  L+N M ++  Q DI+ Y
Sbjct: 249 KEV----------------------TSLLNGFCLNNKVDEARELFNVMIERGEQHDIINY 286

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N+L+NG+CLN  +  A   F  M++RG  PD ITY  L++  C   K+DEA + +  + +
Sbjct: 287 NILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIE 346

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+ PD  SY  +I+G C    + +A   L  M  K++VP    +N ++DG  + G + +
Sbjct: 347 RGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILD 406

Query: 420 AFSIRDLM-LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF-PDVFTYNLL 477
           A+ + D M        +V T+N L+ +  R   +  A +  K ++ +  F P+V++YN+L
Sbjct: 407 AWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNIL 466

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           I   C    +  A+ L++ M  + + PDI+TY  L+        + +A  +  +I   G+
Sbjct: 467 ISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGI 526

Query: 538 AIDHIPFRIL 547
           + +   + IL
Sbjct: 527 SPNLRTYNIL 536



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 190/406 (46%), Gaps = 30/406 (7%)

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
           ++RR  +    +P   T        CK   ++ A  +   M +M P P+   +   +   
Sbjct: 13  YVRRIHLHSQPLPSQST--------CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTI 64

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            ++     A+ L++ M   G+ P  VT NIL++  C  G +  A   +G++L        
Sbjct: 65  AKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKIL---KWGCR 121

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN--GDISSAF 316
            +V+T T LM  +  N     AL ++++M  + I+ D V Y  LING C +  G   +A 
Sbjct: 122 PNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAV 181

Query: 317 AYFCQMLKRGFL-PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
               +M +R  + P++I YNT+++ LCK G ++EA      +   G+ PD  +Y ++I G
Sbjct: 182 QLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYG 241

Query: 376 LCIHGD----------------IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
           LC  G                 + +ARE    M+E+    +   +N++++GY     +  
Sbjct: 242 LCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGE 301

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A  +  +M+  G   +  T+  L+        + +A +L   M+  G+ PDV++YN+LI 
Sbjct: 302 ARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIK 361

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
             C    +  A+ L ++M  + + P+IITY  ++ G C  G + +A
Sbjct: 362 GYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDA 407



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 172/367 (46%), Gaps = 57/367 (15%)

Query: 119 RRHV-AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELC---KIGDLEKADH 174
           R+ V +++   CL  K+  A  L   MI++G   D++ +N L+N  C   K+G+  K  H
Sbjct: 248 RKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFH 307

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++ E  E    P+  TY   + GYC ++++D+A +LF  M   G+ P+  ++NIL+   C
Sbjct: 308 MMVERGE---QPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYC 364

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K   +G+A+  L                                       DMF KN+  
Sbjct: 365 KFERVGEAMNLL--------------------------------------EDMFLKNLVP 386

Query: 295 DIVAYNVLINGFCLNGDISSAFA------YFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           +I+ YN +++G C +G I  A+       Y CQ       PDV TYN LL  LC+   ++
Sbjct: 387 NIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQP-----PPDVTTYNILLESLCRIECVE 441

Query: 349 EASHFYG-VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           +A  F+  ++ +   AP+  SY  +I G C +  + +A      M  K++VP+   +N++
Sbjct: 442 KAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNIL 501

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           +D       L  A ++   ++  G+S N+ T+N LI    +GG    A  +   + + G 
Sbjct: 502 LDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGY 561

Query: 468 FPDVFTY 474
            PDV TY
Sbjct: 562 HPDVKTY 568



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 169/360 (46%), Gaps = 22/360 (6%)

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
            + CK   + DAV     ++   D      ++  T ++ +  K      A+ L+  M  K
Sbjct: 27  QSTCKFDSIDDAVALFHRMV---DMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYK 83

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            +    V +N+LIN FC  G +  AF+   ++LK G  P+V+T+ TL+   C   K+ +A
Sbjct: 84  GVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDA 143

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIH--GDIVKAREFLLSMLEKSVV-PEPHIWNVI 407
            + Y  +    +  D + Y T+I GLC    G    A + L  M E+ +V P   ++N +
Sbjct: 144 LYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTV 203

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG------SIFDAFSLKKE 461
           + G  + G+++ A  +   M+  G+  ++FT+++LI    R G      S+ + F L  +
Sbjct: 204 VHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNK 263

Query: 462 ----------MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
                     M+  G   D+  YN+L+   C    +  A +L+  M+ RG  PD ITYT 
Sbjct: 264 VDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTI 323

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           L+ G+C    + EA  +F  +   GL  D   + IL K Y + +   +A ++ +   L+N
Sbjct: 324 LMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKN 383



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 129/267 (48%), Gaps = 5/267 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   +  ++   CL  K+  A  L   MI++G VPDV ++N L+   CK   + +A +
Sbjct: 315 QPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMN 374

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV-THNILVHAL 233
           ++ +M      PN  TYN+ + G C+   +  A  L   M      P  V T+NIL+ +L
Sbjct: 375 LLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESL 434

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C+   +  A+ F   ++ +       +V +  IL+    KN    +A+ L+N M  KN+ 
Sbjct: 435 CRIECVEKAIAFFKHLIFERS--FAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLV 492

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DIV YN+L++       +  A A   Q++ +G  P++ TYN L+N L K G+   A   
Sbjct: 493 PDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKI 552

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHG 380
              LS  G  PD  +Y  II  LC  G
Sbjct: 553 SLYLSIRGYHPDVKTY--IINELCKGG 577



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 124/252 (49%), Gaps = 9/252 (3%)

Query: 98  LDRLKTMRDT--GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           +D++   R+   G +   L  D   +  +I+  C   ++G A+ L   M  K  VP+++T
Sbjct: 331 IDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIIT 390

Query: 156 HNYLVNELCKIGDLEKADHVIREMSE-MRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           +N +V+ LCK G +  A  ++ EM    +P P+  TYN  +   CR+  ++KA+  F  +
Sbjct: 391 YNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHL 450

Query: 215 A-NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
                  PN  ++NIL+   CK   L +A+     +   +      D++T  IL+D+ F 
Sbjct: 451 IFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKN---LVPDIVTYNILLDALFN 507

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                +A+AL   +  + I  ++  YN+LING    G   +A      +  RG+ PDV T
Sbjct: 508 GQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKT 567

Query: 334 YNTLLNCLCKQG 345
           Y  ++N LCK G
Sbjct: 568 Y--IINELCKGG 577



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 134/296 (45%), Gaps = 22/296 (7%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A+AL++ M   +    IV +  ++         ++A   +  M  +G +P  +T+N L+N
Sbjct: 38  AVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILIN 97

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           C C  G++D A    G + K G  P+ +++ T+++G C++  ++ A      M+ + +  
Sbjct: 98  CFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRF 157

Query: 400 EPHIWNVIIDGY--GRCGDLSNAFSIRDLMLSFG-VSSNVFTFNALILAETRGGSIFDAF 456
           +  ++  +I+G    + G    A  +   M     V  N+  +N ++    + G+I +A 
Sbjct: 158 DDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEAR 217

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L  +M++ GIFPD+FTY+ LI   C  G             R+ +T        L+ G 
Sbjct: 218 VLCSKMIVQGIFPDIFTYSSLIYGLCRAGQ------------RKEVT-------SLLNGF 258

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           C    + EA E+F  +   G   D I + IL   Y    +  +AR +    + R +
Sbjct: 259 CLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGE 314



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 104/240 (43%), Gaps = 15/240 (6%)

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF-----LLSMLE-K 395
           CK   +D+A   +  +      P  + +  I+      G I K R +     L +++E K
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKIL------GTIAKMRYYATAIDLYTLMEYK 83

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
            VVP    +N++I+ +   G +  AFS+   +L +G   NV TF  L+        + DA
Sbjct: 84  GVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDA 143

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCN--LGHIHLALQLYDEMLRRG-ITPDIITYTEL 512
             +  EM+   I  D   Y  LI   C   +G    A+QL  +M  R  + P++I Y  +
Sbjct: 144 LYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTV 203

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           + G C  GN+ EA  + +K+   G+  D   +  L     R  +  +   +   + L NK
Sbjct: 204 VHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNK 263


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 212/429 (49%), Gaps = 6/429 (1%)

Query: 121 HV-AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
           HV  +I+    G K   AL L  +  + G + +V   N +++ LCK G ++KA  ++R+M
Sbjct: 410 HVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFICNTILSWLCKQGKIDKATELLRKM 468

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
                 PN  +YN  +  +CR   +D A  +FS M   G++PN  T++IL+    K    
Sbjct: 469 ESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDE 528

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ-KNIQTDIVA 298
            + ++ + ++ + +     + V+  TI+ +   K G   +A  L  +M + K      ++
Sbjct: 529 QNVLEVVNQMTSSN--IEVNGVVYQTII-NGLCKVGQTSKARELLANMIEEKRFCVSCMS 585

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           YN +I+GF   G++  A A + +M   G  P+VITY +L++ LCK  ++D+A      + 
Sbjct: 586 YNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMK 645

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             GV  D  +Y  +I G C   ++  A      +LE+ + P   ++N +I G+   G++ 
Sbjct: 646 NKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMV 705

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   ML  G+  ++ T+  LI    + G++  A  L  EM   G+ PD   Y +++
Sbjct: 706 AALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIV 765

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
                 G     +++++EM +  +TP+++ Y  +I GH   GN+ EA  +  ++   G+ 
Sbjct: 766 NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 825

Query: 539 IDHIPFRIL 547
            D   F IL
Sbjct: 826 PDGATFDIL 834



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 226/482 (46%), Gaps = 38/482 (7%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
            ++I   C    +G+AL L  KM  +G  P+ +T + L+    K G++EKA    ++M  
Sbjct: 342 TSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMES 401

Query: 182 MRPSPNCATYNAFITGY----------------------------------CRVNELDKA 207
           +  +P+    +  I G+                                  C+  ++DKA
Sbjct: 402 LGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGKIDKA 461

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M + GI PN V++N ++ A C+K  +  A      +L   +     +  T +IL
Sbjct: 462 TELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNML---EKGLKPNNYTYSIL 518

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK-RG 326
           +D  FKN D+   L + N M   NI+ + V Y  +ING C  G  S A      M++ + 
Sbjct: 519 IDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR 578

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           F    ++YN++++   K+G++D A   Y  +   G++P+ I+Y +++ GLC +  + +A 
Sbjct: 579 FCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQAL 638

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E    M  K V  +   +  +I G+ +  ++ +A ++   +L  G++ +   +N+LI   
Sbjct: 639 EMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGF 698

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
              G++  A  L K+ML DG+  D+ TY  LI      G++ LA  LY EM   G+ PD 
Sbjct: 699 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDE 758

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           I YT ++ G   +G   +  ++F +++   +  + + +  +   + R    D+A  +H +
Sbjct: 759 IMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDE 818

Query: 567 WL 568
            L
Sbjct: 819 ML 820



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 216/473 (45%), Gaps = 41/473 (8%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS-PNCATY 191
           K   AL +  + I++G  PD L ++  V   CK  +L  A+ ++REM E +   P+  TY
Sbjct: 247 KPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETY 306

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
            + I    +   ++ A+     M ++GI  N V    L+   CK   LG A+    ++  
Sbjct: 307 TSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKM-- 364

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
           +++G + + V T ++L++ + KNG+  +AL  +  M    +   +   + +I G+     
Sbjct: 365 ENEGPSPNSV-TFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQK 423

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A   F +  + G L +V   NT+L+ LCKQGK+D+A+     +   G+ P+ +SY  
Sbjct: 424 HEEALKLFDESFETG-LANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNN 482

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++   C   ++  AR    +MLEK + P  + ++++IDG  +  D  N   + + M S  
Sbjct: 483 VMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSN 542

Query: 432 VSSN------------------------------------VFTFNALILAETRGGSIFDA 455
           +  N                                      ++N++I    + G +  A
Sbjct: 543 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYA 602

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            +  +EM  +GI P+V TY  L+   C    +  AL++ DEM  +G+  DI  Y  LI G
Sbjct: 603 VAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHG 662

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            C + NM+ A  +F+++   GL      +  L   +R +     A D+++K L
Sbjct: 663 FCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKML 715



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 190/392 (48%), Gaps = 2/392 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  GKI  A  L RKM  +G  P+V+++N ++   C+  +++ A  V   M E    PN
Sbjct: 452 LCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPN 511

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY+  I G  + ++    L + + M ++ I  N V +  +++ LCK G    A + L 
Sbjct: 512 NYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLA 571

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
            ++  ++ +     ++   ++D + K G+   A+A + +M    I  +++ Y  L++G C
Sbjct: 572 NMI--EEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLC 629

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            N  +  A     +M  +G   D+  Y  L++  CK+  ++ AS  +  L + G+ P Q 
Sbjct: 630 KNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQP 689

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            Y ++I G    G++V A +    ML+  +  +   +  +IDG  + G+L  A  +   M
Sbjct: 690 VYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEM 749

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
            + G+  +   +  ++   ++ G       + +EM  + + P+V  YN +I      G++
Sbjct: 750 QAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNL 809

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
             A +L+DEML +GI PD  T+  L+ G   +
Sbjct: 810 DEAFRLHDEMLDKGILPDGATFDILVSGKVGK 841



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 112/219 (51%), Gaps = 3/219 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + +++  LC   ++  AL +R +M  KG   D+  +  L++  CK  ++E A  +  E+ 
Sbjct: 621 YTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELL 680

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   +P+   YN+ I+G+  +  +  AL L+  M  +G+R +  T+  L+  L K+G L 
Sbjct: 681 EEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLI 740

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A     E+ A        D I  T++++   K G   + + ++ +M + N+  +++ YN
Sbjct: 741 LASDLYTEMQAVG---LVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYN 797

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            +I G    G++  AF    +ML +G LPD  T++ L++
Sbjct: 798 AVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 836



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 117/241 (48%), Gaps = 1/241 (0%)

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
           A+N L+N +  +     A     QML+ G +P V   N  L+ L ++  + EA   Y  +
Sbjct: 164 AFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRM 223

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
              GV  D  + + +++         +A E     +E+   P+  ++++ +    +  +L
Sbjct: 224 VAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNL 283

Query: 418 SNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           + A S+ R++        +  T+ ++ILA  + G++ DA   K EM+ DGI  +V     
Sbjct: 284 AMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATS 343

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C    +  AL L+ +M   G +P+ +T++ LI+     G M++A E + K+++LG
Sbjct: 344 LITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLG 403

Query: 537 L 537
           L
Sbjct: 404 L 404



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 120/273 (43%), Gaps = 1/273 (0%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+++Y K+     A+ + N M +  +   +   N  ++       I+ A   + +M+  G
Sbjct: 168 LLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIG 227

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
              D  T   L+    ++ K  EA   +    + G  PD + Y   +Q  C   ++  A 
Sbjct: 228 VDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMAN 287

Query: 387 EFLLSMLEKSV-VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
             L  M EK + VP    +  +I    + G++ +A   +D M+S G+S NV    +LI  
Sbjct: 288 SLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITG 347

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             +   +  A  L  +M  +G  P+  T+++LI      G +  AL+ Y +M   G+TP 
Sbjct: 348 HCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPS 407

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
           +     +I+G       +EA ++F +    GLA
Sbjct: 408 VFHVHTIIQGWLKGQKHEEALKLFDESFETGLA 440



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 5/139 (3%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           LD  K M   G +RC L T    +  +I  L   G +  A  L  +M   G VPD + + 
Sbjct: 708 LDLYKKMLKDG-LRCDLGT----YTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYT 762

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            +VN L K G   K   +  EM +   +PN   YNA I G+ R   LD+A  L   M + 
Sbjct: 763 VIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 822

Query: 218 GIRPNRVTHNILVHALCKK 236
           GI P+  T +ILV     K
Sbjct: 823 GILPDGATFDILVSGKVGK 841



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 63/160 (39%), Gaps = 15/160 (9%)

Query: 402 HIWNVIIDGYGRCGDL-------SNAFSIRDLMLS--------FGVSSNVFTFNALILAE 446
           HI     + YGR  DL       SN   +  +++S        FG   N   FN L+ A 
Sbjct: 113 HILVTSPETYGRASDLLIRYVSTSNPTPMASVLVSNLVDSAKLFGFEVNSRAFNYLLNAY 172

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
           ++      A  +  +ML  G+ P V   N  + A      I  A +LY  M+  G+  D 
Sbjct: 173 SKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDN 232

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
            T   L++         EA EVF++    G   D + + +
Sbjct: 233 GTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSL 272


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 192/376 (51%), Gaps = 3/376 (0%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N ++NE      LE  D+V+     M  SPN  ++N  I   C++  +D+A+ +F  M  
Sbjct: 156 NVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPE 215

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
               P+  T+  L+  LCK+  + +AV  L E+    +G + S VI + +L+D   K GD
Sbjct: 216 RKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM--QSEGCSPSPVIYN-VLIDGLCKKGD 272

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +   L ++MF K    + V YN LI+G CL G +  A +   +M+    +P+ +TY T
Sbjct: 273 LTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L+N L KQ +  +A      + + G   +Q  Y  +I GL   G   +A      M EK 
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P   +++V++DG  R G  + A  I + M++ G   N +T+++L+    + G   +A 
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            + KEM   G   + F Y++LI   C +G +  A+ ++ +ML  GI PD + Y+ +IKG 
Sbjct: 453 QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512

Query: 517 CARGNMKEAEEVFAKI 532
           C  G+M  A +++ ++
Sbjct: 513 CGIGSMDAALKLYHEM 528



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 189/388 (48%), Gaps = 6/388 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI+ LC    +  A+ + R M ++  +PD  T+  L++ LCK   +++A  ++ EM    
Sbjct: 193 VIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP+   YN  I G C+  +L +   L   M   G  PN VT+N L+H LC KG L  AV
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAV 312

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L  +++    K   + +T   L++   K      A+ L + M ++    +   Y+VLI
Sbjct: 313 SLLERMVS---SKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLI 369

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G    G    A + + +M ++G  P+++ Y+ L++ LC++GK +EA      +  +G  
Sbjct: 370 SGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCL 429

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+  +Y ++++G    G   +A +    M +         ++V+IDG    G +  A  +
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 489

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD---GIFPDVFTYNLLIGA 480
              ML+ G+  +   ++++I      GS+  A  L  EML        PDV TYN+L+  
Sbjct: 490 WSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDG 549

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIIT 508
            C    I  A+ L + ML RG  PD+IT
Sbjct: 550 LCMQKDISRAVDLLNSMLDRGCDPDVIT 577



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 176/364 (48%), Gaps = 3/364 (0%)

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           ++ ++  N  I PN ++ N+++ ALCK   +  A++    +    + K   D  T   LM
Sbjct: 173 YVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGM---PERKCLPDGYTYCTLM 229

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           D   K     +A+ L ++M  +      V YNVLI+G C  GD++        M  +G +
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+ +TYNTL++ LC +GKLD+A      +  +   P+ ++Y T+I GL        A   
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L SM E+      HI++V+I G  + G    A S+   M   G   N+  ++ L+    R
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G   +A  +   M+  G  P+ +TY+ L+      G    A+Q++ EM + G + +   
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFC 469

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           Y+ LI G C  G +KEA  V++K+ T+G+  D + +  + K    +   D A  ++ + L
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529

Query: 569 LRNK 572
            + +
Sbjct: 530 CQEE 533



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 14/257 (5%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  ++  LC  GK   A  +  +MI  G +P+  T++ L+    K G  E+A  V +EM 
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   S N   Y+  I G C V  + +A+ ++S M   GI+P+ V ++ ++  LC  G + 
Sbjct: 460 KTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A+K   E+L  ++ K+  DV+T  IL+D      D  +A+ L N M  +    D++  N
Sbjct: 520 AALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCN 579

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
             +N         S  +  C    R FL +++        L K+ ++  A     V+   
Sbjct: 580 TFLNTL-------SEKSNSCDK-GRSFLEELVVR------LLKRQRVSGACTIVEVMLGK 625

Query: 361 GVAPDQISYKTIIQGLC 377
            +AP   ++  I++ +C
Sbjct: 626 YLAPKTSTWAMIVREIC 642


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 219/476 (46%), Gaps = 40/476 (8%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV---------NELCKIGDL 169
           R    +I  LC  G++G A  L   M Q G VP V+T+N ++         N+  KI +L
Sbjct: 174 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 233

Query: 170 -------------------------EKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
                                    E+A+ ++    +   +P   T+   I GYC   + 
Sbjct: 234 MEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 293

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D AL + + M ++  + +      L+++L KK  L +A + L E+ A+       +VIT 
Sbjct: 294 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANG---LVPNVITY 350

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T ++D Y K+G    AL +   M +   Q +   YN L+ G   +  +  A A   +M K
Sbjct: 351 TSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 410

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G +P+VITY TLL   C +   D A   + ++ + G+ PD+ +Y  +   LC  G   +
Sbjct: 411 DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEE 470

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A  F++    K V      +  +IDG+ + G+   A ++ + M+  G + + +T++ L+ 
Sbjct: 471 AYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLH 527

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
           A  +   + +A  +  +M L GI   +F Y +LI      G    A ++Y+EM   G  P
Sbjct: 528 ALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKP 587

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
              TYT  I  +C  G +++AE++  K++  G+A D + + IL      M   D+A
Sbjct: 588 SATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 643



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 134/513 (26%), Positives = 224/513 (43%), Gaps = 50/513 (9%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRR---KMIQKGTV 150
           ++ + D ++ +R TG  R  L    + +   +R L    +     ++ R   +++Q G +
Sbjct: 11  MRVSADAIQAIRRTGSARLALSP--KCYNFALRSL---ARFDMTEYMGRVYSQLVQDGLL 65

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PD +T+N ++   CK GDL  A    R + E    P   T NA + GYCR  EL KA  L
Sbjct: 66  PDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWL 125

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M   G + N  ++ IL+  LC    +  A+     ++   DG  + +V   T L+  
Sbjct: 126 FLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLF--LMMKRDG-CSPNVRAFTFLISG 182

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K+G    A  L++ M Q  +   ++ YN +I G+   G ++ A      M K G  PD
Sbjct: 183 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 242

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC------------- 377
             TYNTL+  LC Q K +EA        K G  P  +++  +I G C             
Sbjct: 243 DWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKN 301

Query: 378 ------------IHGDIV----------KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
                       + G ++          +A+E L  +    +VP    +  IIDGY + G
Sbjct: 302 KMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSG 361

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            +  A  +  +M   G   N +T+N+L+    +   +  A +L  +M  DGI P+V TY 
Sbjct: 362 KVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYT 421

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
            L+   C+      A +L++ M + G+ PD   Y  L    C  G    AEE ++ I   
Sbjct: 422 TLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRK 478

Query: 536 GLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           G+A+  + +  L   + +   +D A  + ++ +
Sbjct: 479 GVALTKVYYTTLIDGFSKAGNTDFAATLIERMI 511



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 196/443 (44%), Gaps = 22/443 (4%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I   C  GK+  AL + + M + G  P+  T+N L+  L K   L KA  ++ +M 
Sbjct: 350 YTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ 409

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  TY   + G C  ++ D A  LF  M  NG++P+   + +L  ALCK G   
Sbjct: 410 KDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAE 469

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A  F+        G A + V  +T L+D + K G+   A  L   M  +    D   Y+
Sbjct: 470 EAYSFIVR-----KGVALTKVYYTT-LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 523

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           VL++  C    ++ A     QM  RG    +  Y  L++ + ++GK D A   Y  ++ +
Sbjct: 524 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 583

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  P   +Y   I   C  G +  A + +L M  + V P+   +N++IDG G  G +  A
Sbjct: 584 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 643

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD----------------AFSLKKEMLL 464
           FS    M+      N +T+  L+    +G   +                  + L + M+ 
Sbjct: 644 FSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVK 703

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            G+ P V TY+ LI   C  G +  A  L D M  +G++P+   YT LIK  C     ++
Sbjct: 704 HGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEK 763

Query: 525 AEEVFAKIQTLGLAIDHIPFRIL 547
           A    + +   G       +R+L
Sbjct: 764 ALSFVSIMSECGFQPQLESYRLL 786



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 204/453 (45%), Gaps = 21/453 (4%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I+ LC    +  AL L   M + G  P+V    +L++ LCK G +  A  +   M 
Sbjct: 141 YTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMP 200

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG--- 237
           +    P+  TYNA I GY ++  ++ AL +   M  NG  P+  T+N L++ LC +    
Sbjct: 201 QNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEE 260

Query: 238 ---LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ-ALALWNDMFQKNIQ 293
              LL +AVK         +G  T  V+T T L++ Y    +KF  AL + N M     +
Sbjct: 261 AEELLNNAVK---------EG-FTPTVVTFTNLINGYCM-AEKFDDALRMKNKMMSSKCK 309

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+  +  LIN       +  A     ++   G +P+VITY ++++  CK GK+D A   
Sbjct: 310 LDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEV 369

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             ++ + G  P+  +Y +++ GL     + KA   L  M +  ++P    +  ++ G   
Sbjct: 370 LKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCD 429

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             D  NAF + ++M   G+  +   +  L  A  + G   +A+S    ++  G+      
Sbjct: 430 EHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVY 486

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  LI      G+   A  L + M+  G TPD  TY+ L+   C +  + EA  +  ++ 
Sbjct: 487 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 546

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             G+      + IL     R  + D A+ ++ +
Sbjct: 547 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 579



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 133/327 (40%), Gaps = 19/327 (5%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++  LC   ++  AL +  +M  +G    +  +  L++E+ + G  + A  + 
Sbjct: 518 DSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMY 577

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM+     P+  TY  FI  YC+   L+ A  L   M   G+ P+ VT+NIL+      
Sbjct: 578 NEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHM 637

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF----QALALWN------- 285
           G +  A   L  ++         +  T  +L+    K    +        +WN       
Sbjct: 638 GYIDRAFSTLKRMVG---ASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDIT 694

Query: 286 -----DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
                 M +  +   +  Y+ LI GFC  G +  A      M  +G  P+   Y  L+ C
Sbjct: 695 WQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKC 754

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
            C     ++A  F  ++S+ G  P   SY+ ++ GLC  GD  K +     +LE     +
Sbjct: 755 CCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHD 814

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLM 427
              W ++ DG  + G +   F +  +M
Sbjct: 815 EVAWKILNDGLLKAGYVDICFQMLSIM 841



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 29/260 (11%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +   I   C  G++  A  L  KM ++G  PDV+T+N L++    +G +++A   ++ M 
Sbjct: 592 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 651

Query: 181 EMRPSPNCATYNAFI----------------TGYCRVNELDKALHLFSTMANNGIRPNRV 224
                PN  TY   +                +G   + ELD    L   M  +G+ P   
Sbjct: 652 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 711

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATS---DVITSTI--LMDSYFKNGDKFQ 279
           T++ L+   CK G L +A   L  +     GK  S   D+ T  I    D+ F      +
Sbjct: 712 TYSSLIAGFCKAGRLEEACLLLDHMC----GKGLSPNEDIYTLLIKCCCDTKFFE----K 763

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           AL+  + M +   Q  + +Y +L+ G C  GD     + FC +L+ G+  D + +  L +
Sbjct: 764 ALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILND 823

Query: 340 CLCKQGKLDEASHFYGVLSK 359
            L K G +D       ++ K
Sbjct: 824 GLLKAGYVDICFQMLSIMEK 843


>gi|293332227|ref|NP_001169164.1| uncharacterized protein LOC100383014 [Zea mays]
 gi|223975267|gb|ACN31821.1| unknown [Zea mays]
          Length = 469

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 207/412 (50%), Gaps = 3/412 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  +C  G +  AL L ++M + G  P+V+T+  LV+  C    +E+A  V+  M E  
Sbjct: 16  LVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKG 75

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            S   ATY + + G  R  E ++A  + S    +    + + ++ L++ L K  +  +AV
Sbjct: 76  VSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAV 135

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   ++        ++   T +I++    K  +      L +D  +K        Y ++I
Sbjct: 136 ELAKKMSKRGYLLGST---TFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGFDMYIMII 192

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
             F    DIS A  YF QM+  G L  V +YN +++C  K G+++ A     V+ ++G +
Sbjct: 193 KSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGFS 252

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ +++ T+I G    G++  A+ FL  ++E  ++P+   +  +IDG      L +AF+ 
Sbjct: 253 PNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNC 312

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M  +GV  NV T+N LI      G +  A  L  +M +DGI PD +++N  I + C 
Sbjct: 313 FSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCR 372

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           +  I  A +L+++M R G++PD  TY  LIK  C    + EA+E+   ++++
Sbjct: 373 MRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESI 424



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 190/413 (46%), Gaps = 38/413 (9%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+C TYN  + G CR   +D+AL L   M   GIRPN VT+ +LV   C    + +AV  
Sbjct: 8   PDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCV 67

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L E + +    AT     S  L+   F+  +K +A  + ++  + +     +AY+ L+  
Sbjct: 68  L-ERMKEKGVSATEATYRS--LVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYC 124

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC---------LC-------KQG---- 345
              N     A     +M KRG+L    T++ ++ C         LC       K+G    
Sbjct: 125 LSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLG 184

Query: 346 ---------------KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
                           + +A+ ++  +   G+     SY  +I      G++ +A E + 
Sbjct: 185 FDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIK 244

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M E    P    +N +I+GY + G++ +A +   +++  G+  +V TF +LI       
Sbjct: 245 VMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTH 304

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + DAF+   EM   G+ P+V TYN+LI   C+ GH+  A++L ++M   GITPD  ++ 
Sbjct: 305 QLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFN 364

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
             I   C    +++A+++F  +   G++ D   +  L K     +  D+A++I
Sbjct: 365 APILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEI 417



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 173/385 (44%), Gaps = 38/385 (9%)

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  +G RP+  T+N LVH +C++G++ +A++ + ++   +      +V+T T+L+D +  
Sbjct: 1   MPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQM---ERAGIRPNVVTYTMLVDGFCN 57

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                +A+ +   M +K +      Y  L++G     +   A+    + ++       I 
Sbjct: 58  ASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIA 117

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTG----------VAPDQIS--------------- 368
           Y+TLL CL K     EA      +SK G          V P  +                
Sbjct: 118 YHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFI 177

Query: 369 ----------YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
                     Y  II+      DI KA ++   M+   ++     +N++ID + + G++ 
Sbjct: 178 KKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVE 237

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A     +M   G S N+ TFN LI    + G++ DA +  K ++  G+ PDV T+  LI
Sbjct: 238 RALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLI 297

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C+   +  A   + EM   G+ P++ TY  LI G C+ G++ +A E+  K++  G+ 
Sbjct: 298 DGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGIT 357

Query: 539 IDHIPFRILKKRYRRMKESDKARDI 563
            D   F      + RM++ +KA+ +
Sbjct: 358 PDAYSFNAPILSFCRMRKIEKAQKL 382



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 69/120 (57%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I  LC   ++  A     +M + G  P+V T+N L++ LC  G + KA  ++ +M   
Sbjct: 295 SLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMD 354

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  ++NA I  +CR+ +++KA  LF+ M+  G+ P+  T+N L+ ALC +  + +A
Sbjct: 355 GITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEA 414



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 57/107 (53%)

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           M  DG  PD FTYN L+   C  G +  AL+L  +M R GI P+++TYT L+ G C    
Sbjct: 1   MPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASR 60

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           ++EA  V  +++  G++     +R L     R  E ++A  +  +W+
Sbjct: 61  VEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWI 107


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 185/371 (49%), Gaps = 4/371 (1%)

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           + + G   +A  + RE     P+ +  TYN  I G+C  ++LD A  L   M   G++ N
Sbjct: 1   MVRAGSHNQALQLFRENPCQLPASS-VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
             T +I++  LC+ G +  A++     L  +   A  DV++ T L++   K G    A  
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASL--ELAHAQPDVVSYTTLINGLCKLGRVDAAFD 117

Query: 283 LWNDMFQKN-IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
           L+  M      + +   YN L++G C    + +A A   +  KR F PDV+TYNTL+  L
Sbjct: 118 LFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAAL 177

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
            + G++DEA   +  +++ G  P  +S+  II GLC    +  A E    M+++   P  
Sbjct: 178 FQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNL 237

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             ++V+IDG  +   L  A  + D M+S G   ++  +  L+L  +  G +  A  L + 
Sbjct: 238 VTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRR 297

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           M+  G  PDV TY ++I   C +G +  A +++ E++    +P+++TY+ LI G+C    
Sbjct: 298 MVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASR 357

Query: 522 MKEAEEVFAKI 532
           + E  +V  ++
Sbjct: 358 VDEGGKVMREM 368



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 189/406 (46%), Gaps = 8/406 (1%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           C L      +  +IR  C    +  A  L R+M  +G   +  T + ++  LC+ G + +
Sbjct: 19  CQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQ 78

Query: 172 A-DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM-ANNGIRPNRVTHNIL 229
           A +H    +      P+  +Y   I G C++  +D A  LF  M A  G RPN  T+N L
Sbjct: 79  ALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNAL 138

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           V  LCK+  L  A   + E    D      DV+T   LM + F+ G   +ALA +  M +
Sbjct: 139 VDGLCKQDRLDAARAVITEARKRD---FAPDVVTYNTLMAALFQLGRVDEALATFTQMTE 195

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           +     +V++N +I G C    ++ A   F +M+ R F P+++TY+ +++ LCK  +LDE
Sbjct: 196 EGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDE 255

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A      +   G  PD ++Y  ++ G    G +  A   L  M+ +  +P+   + V+ID
Sbjct: 256 AQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVID 315

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
              + G + +A  I   +++   S NV T++ALI    R   + +   + +EM      P
Sbjct: 316 KLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRP 372

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           +V TYN +I     +     A  ++ EM   G  PD  TY  L + 
Sbjct: 373 NVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRA 418



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 5/196 (2%)

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
           ++Y  +I+G C   D+  A   L  M  + +       ++I+ G  RCG ++ A    D 
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 427 MLSFG-VSSNVFTFNALILAETRGGSIFDAFSLKKEMLL-DGIFPDVFTYNLLIGASCNL 484
            L       +V ++  LI    + G +  AF L ++M+   G  P+ FTYN L+   C  
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
             +  A  +  E  +R   PD++TY  L+      G + EA   F ++   G     + F
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205

Query: 545 RILKK---RYRRMKES 557
             +     R RR+ ++
Sbjct: 206 NAIITGLCRARRLADA 221


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 206/427 (48%), Gaps = 25/427 (5%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           HV V +++ L      AL +  +M++   +P++ T + L++ +CK G  + A  +  EM+
Sbjct: 169 HVMVRKEVVL-----LALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMT 223

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           + R  PN  TY   I+G C+  + D A  LF  M ++G  P+ VT+N L+H  CK G + 
Sbjct: 224 QRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVD 283

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW-NDMFQKNIQTDIVAY 299
           +A+  L     D   +   D    + L+D  F+   +F+   +W   M + NI+ D++ Y
Sbjct: 284 EALGLLKYFEKD---RYVLDKQGYSCLIDGLFR-ARRFEDAQVWYRKMTEHNIKPDVILY 339

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
            +++ G    G    A     +M +RG +PD   YN L+   C  G LDEA   +  +SK
Sbjct: 340 TIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISK 399

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
                   +Y  +I G+C  G +  A++    M +    P    +N +IDG+ + G++  
Sbjct: 400 NDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEK 459

Query: 420 AFSIRDLMLSFGVSSNVF--------------TFNALILAETRGGSIFDAFSLKKEMLLD 465
           A  +    +  G + ++F              +   ++      G I  A+++  ++   
Sbjct: 460 A-QLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDS 518

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G  P++ TYN+LI   C  G+I+ A +L+ E+  +G++PD +TY  LI G  +    ++A
Sbjct: 519 GFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDA 578

Query: 526 EEVFAKI 532
             V  +I
Sbjct: 579 FTVLDQI 585



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 189/380 (49%), Gaps = 3/380 (0%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           ++HN +++ L K    E    V++E+     S +   +   I  Y +++ ++KA+  F  
Sbjct: 92  VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M +   +P+  T+N ++H + +K ++  A+     +L  +      ++ T +IL+D   K
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLN---CLPNIATFSILIDGMCK 208

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           +G    AL ++++M Q+ I  + + Y ++I+G C       A+  F  M   G +PD +T
Sbjct: 209 SGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVT 268

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN LL+  CK G++DEA        K     D+  Y  +I GL        A+ +   M 
Sbjct: 269 YNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMT 328

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           E ++ P+  ++ +++ G  + G   +A  + + M   G+  +   +NALI      G + 
Sbjct: 329 EHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLD 388

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A SL  E+  +  F    TY +LI   C  G +  A Q+++EM + G  P ++T+  LI
Sbjct: 389 EAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALI 448

Query: 514 KGHCARGNMKEAEEVFAKIQ 533
            G C  GN+++A+ +F K++
Sbjct: 449 DGFCKAGNIEKAQLLFYKME 468



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 190/446 (42%), Gaps = 38/446 (8%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           RKM +    PDV+ +  ++  L K G  + A  ++ EM+E    P+   YNA I GYC +
Sbjct: 325 RKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDL 384

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
             LD+A  L   ++ N    +  T+ IL+  +C+ GL+GDA +   E+   +       V
Sbjct: 385 GLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEM---EKHGCYPSV 441

Query: 262 ITSTILMDSYFKNGDKFQALALWNDM--------FQK-----NIQTDIVAYNVLINGFCL 308
           +T   L+D + K G+  +A  L+  M        F +     N   D  +   ++   C 
Sbjct: 442 VTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCD 501

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           +G I  A+    Q+   GF P++ITYN L++  CK G ++ A   +  L   G++PD ++
Sbjct: 502 SGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVT 561

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI----- 423
           Y T+I GL        A   L  +L+    P   ++   +    R   ++ AFS+     
Sbjct: 562 YGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYL 621

Query: 424 -----RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
                RD  +   V  N   F    + E   G +   F L    L          Y + +
Sbjct: 622 RSIPGRDSEVLKSVEEN---FEKGEVEEAVRGLLEMDFKLNDFQLA--------PYTIWL 670

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG-L 537
              C  G +  AL+++  +    +     +  +LI      GN+  A E+F      G +
Sbjct: 671 IGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYM 730

Query: 538 AIDHIPFRILKKRYRRMKESDKARDI 563
            +  I  R+LK   R   + ++A D+
Sbjct: 731 LMPRICNRLLKSLLRSEDKRNRAFDL 756



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 131/293 (44%), Gaps = 16/293 (5%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +++ L   GK   AL L  +M ++G VPD   +N L+   C +G L++A 
Sbjct: 332 IKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAK 391

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  E+S+     +  TY   I G CR   +  A  +F+ M  +G  P+ VT N L+   
Sbjct: 392 SLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGF 451

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATS-------------DVITSTILMDSYFKNGDKFQA 280
           CK G +  A     ++   + G+  S             D  +   +++    +G   +A
Sbjct: 452 CKAGNIEKAQLLFYKM---EIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKA 508

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC 340
             +   +       +I+ YN+LI+GFC  G+I+ AF  F ++  +G  PD +TY TL+N 
Sbjct: 509 YNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLING 568

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           L    + ++A      + K G  P    YK+ +   C    I  A    L  L
Sbjct: 569 LLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYL 621


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 218/470 (46%), Gaps = 27/470 (5%)

Query: 96  ENLDRLKTM-RDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           E L+  + M +D  P       D   + A++  LC  GK   A  + R+MI +G  PD +
Sbjct: 62  EALEHFRAMAKDCAP-------DVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTV 114

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC-RVNELDKALHLFST 213
           T + L++ LCK G  E+A  V+ ++ +     + A +   I   C + N ++ A  +   
Sbjct: 115 TFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGV 174

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           +   G  P  +  N++++  CK   L  A K L EV+ +       +V T TIL+    K
Sbjct: 175 VIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLL-EVMIEKG--CVPNVFTFTILITGLCK 231

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                +A  L   M       ++V Y+ +ING C  G +  A+  F  M +R   P+V+T
Sbjct: 232 ANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVT 291

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           +N L++ LCK  +++EA   Y  + +TG APD I+Y ++I GLC    + +A +   ++ 
Sbjct: 292 HNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIP 351

Query: 394 EKSVVPEPHI-WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           E  V     + ++ +  GY   G +++A  I  +++  G S ++ T+ +LIL   +    
Sbjct: 352 ESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRA 411

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +   L +EM   G  P V T + ++G      H   A+QL+D M  RG T D + Y  +
Sbjct: 412 VEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLV 471

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
           ++G        +A  V  +              ++ KR R+   S  A D
Sbjct: 472 VEGMARASKHNKALAVLEQ--------------VIDKRDRKFNPSSSAVD 507



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 221/470 (47%), Gaps = 11/470 (2%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+ M+  G      E +   H  +++ LC  G++  AL   R M  K   PDV+T+  LV
Sbjct: 32  LEEMKSNG-----FEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALV 85

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           + LCK G  ++A  ++REM     +P+  T++  I G C+    ++A  +   +   G+ 
Sbjct: 86  HALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMG 145

Query: 221 PNRVTHNILVHALCKK-GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            +      ++  LC K   +  A K LG V+A      T  V+   ++++ + K  D   
Sbjct: 146 NSDAAFETIIQRLCNKYNSVELASKVLGVVIAKG---FTPTVLMFNLVINGFCKAKDLDS 202

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  L   M +K    ++  + +LI G C    +  A     +M+  G  P+V+TY+T++N
Sbjct: 203 AYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVIN 262

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LCKQG++D+A   + ++ +    P+ +++  +I GLC    I +AR+    M E    P
Sbjct: 263 GLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAP 322

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS-SNVFTFNALILAETRGGSIFDAFSL 458
           +   +N +IDG  +   +  AF +   +   GVS +N  T++ L       G + DA  +
Sbjct: 323 DIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRI 382

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
              ++  G  PD+ TY  LI   C        ++L +EM  +G  P + T + ++ G   
Sbjct: 383 FSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFE 442

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             + + A ++F  +   G   D + + ++ +   R  + +KA  + ++ +
Sbjct: 443 GNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVI 492



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 166/354 (46%), Gaps = 5/354 (1%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           PN  TY   I G+    +LD A+ L   M +NG   N V H  L+  LC  G + +A++ 
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
              +  D       DV+T T L+ +  K G   +A  +  +M  +    D V ++ LI+G
Sbjct: 67  FRAMAKD----CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDG 122

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC-KQGKLDEASHFYGVLSKTGVAP 364
            C  G    AF     +++RG       + T++  LC K   ++ AS   GV+   G  P
Sbjct: 123 LCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTP 182

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
             + +  +I G C   D+  A + L  M+EK  VP    + ++I G  +   +  A  + 
Sbjct: 183 TVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLL 242

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           + M++ G S NV T++ +I    + G + DA+ L + M      P+V T+N+LI   C  
Sbjct: 243 EKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKA 302

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
             I  A QLY  M   G  PDIITY  LI G C    + EA ++F  I   G++
Sbjct: 303 KRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVS 356



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 183/404 (45%), Gaps = 6/404 (1%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
           +P+  T+  L+      GDL+ A  ++ EM       N   +   + G C    + +AL 
Sbjct: 6   MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
            F  MA +   P+ +T+  LVHALCK G   +A   L E++A        D +T + L+D
Sbjct: 66  HFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARG---CAPDTVTFSTLID 121

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN-GDISSAFAYFCQMLKRGFL 328
              K G + QA  +  D+ Q+ +     A+  +I   C     +  A      ++ +GF 
Sbjct: 122 GLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFT 181

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P V+ +N ++N  CK   LD A     V+ + G  P+  ++  +I GLC    + +A++ 
Sbjct: 182 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQL 241

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  M+     P    ++ +I+G  + G + +A+ +  LM       NV T N LI    +
Sbjct: 242 LEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCK 301

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT-PDII 507
              I +A  L   M   G  PD+ TYN LI   C    +  A QL+  +   G++  + +
Sbjct: 302 AKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAV 361

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           TY+ L  G+ A G M +A  +F+ +   G + D   +  L   Y
Sbjct: 362 TYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEY 405



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 202/449 (44%), Gaps = 11/449 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI   C    + +A  L   MI+KG VP+V T   L+  LCK   + +A  ++ +M    
Sbjct: 190 VINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGG 249

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SPN  TY+  I G C+  ++D A  LF  M      PN VTHNIL+  LCK   + +A 
Sbjct: 250 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 309

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT-DIVAYNVL 302
           +    +    +     D+IT   L+D   K+    +A  L+  + +  +   + V Y+ L
Sbjct: 310 QLYHRM---RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTL 366

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            +G+   G ++ A   F  ++ +GF PD+ TY +L+   CK  +  E       ++  G 
Sbjct: 367 FHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGF 426

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P   +   ++ GL       +A +   SM  +    +  I+N++++G  R    + A +
Sbjct: 427 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALA 486

Query: 423 IRDLML-----SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
           + + ++      F  SS+    +AL+ +  + G   DA  L  +M   G    V +YN L
Sbjct: 487 VLEQVIDKRDRKFNPSSSAV--DALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGL 544

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           +     L     A Q+++ M+  G  P+I T   +I   C+   + +A E+  ++  LG 
Sbjct: 545 LSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGC 604

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQK 566
             D      L   Y +   +D AR + ++
Sbjct: 605 CPDIETCNTLIGGYCKSGRADLARKLLEE 633



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 176/424 (41%), Gaps = 40/424 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   ++G A  L  KM+  G  P+V+T++ ++N LCK G ++ A  + + M    
Sbjct: 225 LITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 284

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T+N  I G C+   +++A  L+  M   G  P+ +T+N L+  LCK   + +A 
Sbjct: 285 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 344

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +    +   + G + ++ +T + L   Y   G    A  +++ +  K    D+  Y  LI
Sbjct: 345 QLFQTI--PESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 402

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
             +C             +M  +GF P V T + +L  L +    + A   +  ++  G  
Sbjct: 403 LEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCT 462

Query: 364 PDQISYKTIIQG--------------------------------------LCIHGDIVKA 385
            D + Y  +++G                                      LC  G    A
Sbjct: 463 DDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDA 522

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           ++ L  M E+        +N ++ G  R      A  + + M+S G +  + T N +I  
Sbjct: 523 KQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISW 582

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
                 + DA+ L + M   G  PD+ T N LIG  C  G   LA +L +EM   G+ P+
Sbjct: 583 LCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN 642

Query: 506 IITY 509
             T+
Sbjct: 643 DTTH 646



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 151/315 (47%), Gaps = 15/315 (4%)

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T  IL+  +   GD   A+ L  +M     + + V +  L+ G C  G +  A  +F + 
Sbjct: 11  TYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHF-RA 69

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           + +   PDV+TY  L++ LCK GK DEA      +   G APD +++ T+I GLC  G  
Sbjct: 70  MAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSE 129

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGY-GRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
            +A   L  ++++ +      +  II     +   +  A  +  ++++ G +  V  FN 
Sbjct: 130 EQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNL 189

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           +I    +   +  A+ L + M+  G  P+VFT+ +LI   C    +  A QL ++M+  G
Sbjct: 190 VINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGG 249

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL-------------K 548
            +P+++TY+ +I G C +G + +A E+F  ++      + +   IL             +
Sbjct: 250 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 309

Query: 549 KRYRRMKESDKARDI 563
           + Y RM+E+  A DI
Sbjct: 310 QLYHRMRETGCAPDI 324



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 171/396 (43%), Gaps = 42/396 (10%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  VI  LC  G++  A  L + M ++   P+V+THN L++ LCK   +E+A  +   M 
Sbjct: 257 YSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMR 316

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP-NRVTHNILVHALCKKGLL 239
           E   +P+  TYN+ I G C+  ++D+A  LF T+  +G+   N VT++ L H     G +
Sbjct: 317 ETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRM 376

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN------------------------- 274
            DA +    ++   D   + D+ T T L+  Y K                          
Sbjct: 377 ADACRIFSMLV---DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 433

Query: 275 ----GDKFQ------ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
               G  F+      A+ L++ M  +    D + YN+++ G       + A A   Q++ 
Sbjct: 434 SAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVID 493

Query: 325 ---RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
              R F P     + L+  LC+ G+ D+A      +S+ G A    SY  ++ GL     
Sbjct: 494 KRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQR 553

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
             +A +   +M+     PE    NV+I        + +A+ +   M   G   ++ T N 
Sbjct: 554 WDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNT 613

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
           LI    + G    A  L +EM   G+ P+  T++LL
Sbjct: 614 LIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 133/277 (48%), Gaps = 8/277 (2%)

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y +LI GF   GD+  A     +M   GF  + + + TL+  LC  G++ EA   +  ++
Sbjct: 12  YGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA 71

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           K   APD ++Y  ++  LC  G   +A+  L  M+ +   P+   ++ +IDG  + G   
Sbjct: 72  KD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEE 130

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML----LDGIFPDVFTY 474
            AF + + ++  G+ ++   F  +I    R  + +++  L  ++L      G  P V  +
Sbjct: 131 QAFRVLEDVIQRGMGNSDAAFETII---QRLCNKYNSVELASKVLGVVIAKGFTPTVLMF 187

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           NL+I   C    +  A +L + M+ +G  P++ T+T LI G C    + EA+++  K+ T
Sbjct: 188 NLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVT 247

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            G + + + +  +     +  + D A ++ Q    RN
Sbjct: 248 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 284


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 211/434 (48%), Gaps = 4/434 (0%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A+ +  +M  +G V    T N +++    +G +E A+++  EM +   SP+C ++
Sbjct: 168 GKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              +   C +  + +A    + M   G   +  T  +++ A C+KG +   V +  +++ 
Sbjct: 228 KLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV- 286

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     +VI  T L++   K G   QA  L  +M ++  + ++  +  LI+G C  G 
Sbjct: 287 --EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGW 344

Query: 312 ISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
              AF  F ++++  G+ P+V TY  ++N  CK+ KL+ A      + + G+ P+  +Y 
Sbjct: 345 TEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYT 404

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           T+I G C  G+ V+A E +  M ++   P  + +N IIDG  + G L  A+ + + +   
Sbjct: 405 TLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVH 464

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+ ++  T+  L+    R      +     +ML  G  PD+ +Y  LI   C    +  +
Sbjct: 465 GLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKES 524

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
            +L++E +  G+ P   TYT +I G+C  GN   A ++F ++   G A D I +  L   
Sbjct: 525 ERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISG 584

Query: 551 YRRMKESDKARDIH 564
             +  + D AR+++
Sbjct: 585 LCKESKLDDARNLY 598



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 187/404 (46%), Gaps = 3/404 (0%)

Query: 130 LGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCA 189
           +G  +    WL   M+++G + D  T   +++  C+ G + +      +M EM  +PN  
Sbjct: 237 MGRVLEAEKWLN-AMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVI 295

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            + A I G C+   + +A  L   M   G +PN  TH  L+  LCKKG    A +   ++
Sbjct: 296 NFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKL 355

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +  D  K   +V T T +++ Y K     +A  L + M ++ +  +   Y  LI+G C  
Sbjct: 356 VRSDGYKP--NVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKV 413

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G+   A+     M K GF P++ TYN +++ LCK+G LDEA      +S  G+  D ++Y
Sbjct: 414 GNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTY 473

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             ++   C   D  ++  F   ML+    P+ H +  +I  + R   +  +  + +  +S
Sbjct: 474 TILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVS 533

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+     T+ ++I    R G+   A  L + M   G  PD  TY  LI   C    +  
Sbjct: 534 LGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDD 593

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           A  LYD M+ +G++P  +T   L   +C + +   A  V  +++
Sbjct: 594 ARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLE 637



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 118/476 (24%), Positives = 220/476 (46%), Gaps = 19/476 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLG-GKIGTALWLRRKMIQKGTVPD 152
           LKE ++ +  M++ G V  T      + +  + D+ +G G +  A  +  +M Q+G  PD
Sbjct: 170 LKEAVNMVVEMQNQGLVXST------QTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPD 223

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
            ++   +V   C +G + +A+  +  M E     + AT    I  +C+   +++ +  F 
Sbjct: 224 CVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW 283

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M   G+ PN +    L++ LCK+G +  A + L E++         +V T T L+D   
Sbjct: 284 KMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRG---WKPNVYTHTTLIDGLC 340

Query: 273 KNGDKFQALALW-----NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           K G   +A  L+     +D ++ N+ T    Y  +ING+C    ++ A     +M ++G 
Sbjct: 341 KKGWTEKAFRLFLKLVRSDGYKPNVHT----YTAMINGYCKEDKLNRAEMLLSRMQEQGL 396

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +P+  TY TL++  CK G    A     ++ K G +P+  +Y  II GLC  G + +A  
Sbjct: 397 VPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYR 456

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L  +    +  +   + +++  + R  D + +    + ML  G + ++ ++  LI    
Sbjct: 457 LLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFC 516

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           R   + ++  L +E +  G+ P   TY  +I   C  G+  LA++L+  M   G  PD I
Sbjct: 517 RQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSI 576

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           TY  LI G C    + +A  ++  +   GL+   +    L   Y +  +S  A ++
Sbjct: 577 TYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINV 632



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 183/410 (44%), Gaps = 7/410 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G +   +    KM++ G  P+V+    L+N LCK G +++A  ++ EM    
Sbjct: 265 IIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRG 324

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMA-NNGIRPNRVTHNILVHALCKKGLLGDA 242
             PN  T+   I G C+    +KA  LF  +  ++G +PN  T+  +++  CK+  L  A
Sbjct: 325 WKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRA 384

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L  +    +     +  T T L+D + K G+  +A  L + M ++    +I  YN +
Sbjct: 385 EMLLSRM---QEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI 441

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C  G +  A+    ++   G   D +TY  L++  C+Q   + +  F+  + K G 
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGF 501

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  SY T+I   C    + ++       +   ++P    +  +I GY R G+ S A  
Sbjct: 502 TPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVK 561

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M + G + +  T+ ALI    +   + DA +L   M+  G+ P   T   L    C
Sbjct: 562 LFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYC 621

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
                  A+ + D + +R     I T   L++  C+ G +  A   F K+
Sbjct: 622 KKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKL 668



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 187/408 (45%), Gaps = 24/408 (5%)

Query: 158 YLVNELCKIGD--LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           Y+V+    IG+  LE+A+ V++ M               +  +    +L +A+++   M 
Sbjct: 137 YIVSATALIGNKNLERANEVMQCM---------------VMNFAENGKLKEAVNMVVEMQ 181

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           N G+  +  T N ++      GL+  A     E+        + D ++  +++ +    G
Sbjct: 182 NQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG---VSPDCVSFKLMVVACCNMG 238

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
              +A    N M ++    D     ++I+ FC  G ++    YF +M++ G  P+VI + 
Sbjct: 239 RVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFT 298

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA-REFLLSMLE 394
            L+N LCKQG + +A      + + G  P+  ++ T+I GLC  G   KA R FL  +  
Sbjct: 299 ALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRS 358

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
               P  H +  +I+GY +   L+ A  +   M   G+  N  T+  LI    + G+   
Sbjct: 359 DGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVR 418

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A+ L   M  +G  P+++TYN +I   C  G +  A +L +++   G+  D +TYT L+ 
Sbjct: 419 AYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMS 478

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKESDK 559
            HC + +   +   F K+  +G   D   +  L     R ++MKES++
Sbjct: 479 VHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESER 526



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 167/350 (47%), Gaps = 5/350 (1%)

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
           R N V    +V    + G L +AV  + E+   + G   S    + +L D     G    
Sbjct: 152 RANEVMQ-CMVMNFAENGKLKEAVNMVVEM--QNQGLVXSTQTLNCVL-DVAVGMGLVEI 207

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  ++ +M Q+ +  D V++ +++   C  G +  A  +   M++RGF+ D  T   +++
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIID 267

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             C++G ++    ++  + + G+AP+ I++  +I GLC  G I +A E L  M+ +   P
Sbjct: 268 AFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKP 327

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
             +    +IDG  + G    AF +   L+ S G   NV T+ A+I    +   +  A  L
Sbjct: 328 NVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEML 387

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
              M   G+ P+  TY  LI   C +G+   A +L D M + G +P+I TY  +I G C 
Sbjct: 388 LSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCK 447

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +G++ EA  +  K+   GL  D + + IL   + R  +++++     K L
Sbjct: 448 KGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 61/130 (46%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I   C   ++  +  L  + +  G +P   T+  ++   C+ G+   A  + 
Sbjct: 504 DIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLF 563

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
           + MS    +P+  TY A I+G C+ ++LD A +L+  M + G+ P  VT   L +  CKK
Sbjct: 564 QRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKK 623

Query: 237 GLLGDAVKFL 246
                A+  L
Sbjct: 624 DDSSTAINVL 633



 Score = 46.2 bits (108), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 3/132 (2%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           + + ++I   C  G    A+ L ++M   G  PD +T+  L++ LCK   L+ A ++   
Sbjct: 541 KTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDA 600

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M +   SP   T       YC+ ++   A+++   +     R    T N LV  LC +G 
Sbjct: 601 MMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEK---RQWIRTVNTLVRKLCSEGK 657

Query: 239 LGDAVKFLGEVL 250
           L  A  F  ++L
Sbjct: 658 LDMAALFFHKLL 669


>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 200/406 (49%), Gaps = 8/406 (1%)

Query: 143 KMIQKGTVP-DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           +  +KG  P +V  +  +V   C    L++A  V  +M      P+   Y++ I GYC+ 
Sbjct: 289 QAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKS 348

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
           + L +AL L   M + G++ N V  + ++H L + G+  + V    E+    +     D 
Sbjct: 349 HNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKEL---KESGMFLDG 405

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +   I+ D+    G    A+ +  +M  K +  D+  Y  LING+CL GD+ +AF  F +
Sbjct: 406 VAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKE 465

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M ++G  PD++TYN L   L + G   E       +   G+ P+  ++K II+GLC  G 
Sbjct: 466 MKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGK 525

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           +++A  +  S+ +K++     I++ +++GY     +  ++ +   +L+ G  +   +   
Sbjct: 526 VLEAEVYFNSLEDKNI----EIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFK 581

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           L+      G I  A  L   MLL  + P    Y+ ++ A C  G +  A  L+D  + RG
Sbjct: 582 LLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRG 641

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            TPD++TYT +I  +C    ++EA ++F  ++  G+  D I F +L
Sbjct: 642 FTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVL 687



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 200/428 (46%), Gaps = 24/428 (5%)

Query: 129 CLGGKIGTALWLR---RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           CLG ++G  L +    +++ + G   D + +N + + LC +G +E A  ++ EM   R  
Sbjct: 379 CLG-EMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLG 437

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
            +   Y   I GYC   +L  A ++F  M   G++P+ VT+N+L   L + G   + VK 
Sbjct: 438 LDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKL 497

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L + +     K  S   T  ++++     G   +A   +N +  KNI+     Y+ ++NG
Sbjct: 498 L-DFMESQGMKPNS--TTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIEI----YSAMVNG 550

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           +C    +  ++  F ++L +G +    +   LL+ LC  G +++A      +  + V P 
Sbjct: 551 YCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPS 610

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
           +I Y  I+  LC  GD+  AR      + +   P+   + ++I+ Y R   L  A  +  
Sbjct: 611 KIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQ 670

Query: 426 LMLSFGVSSNVFTFNALILAETRG--GSIFDAFSLKK-----------EMLLDGIFPDVF 472
            M   G+  +V TF  L+    +   G  F +   +K           +M    I PDV 
Sbjct: 671 DMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVV 730

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            Y +L+       +   A+ L+D+M+  G+ PD ITYT L+ G C RG++++A  +  ++
Sbjct: 731 CYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEM 790

Query: 533 QTLGLAID 540
            + G+  D
Sbjct: 791 SSKGMTPD 798



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 194/434 (44%), Gaps = 27/434 (6%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E +D+ K ++++G     +  D   +  V   LC+ GK+  A+ +  +M  K    DV  
Sbjct: 388 EVVDQFKELKESG-----MFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKH 442

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +  L+N  C  GDL  A ++ +EM E    P+  TYN    G  R     + + L   M 
Sbjct: 443 YTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFME 502

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           + G++PN  TH +++  LC  G + +A  +    L D + +  S ++      D   K+ 
Sbjct: 503 SQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNS-LEDKNIEIYSAMVNGYCETDLVKKSY 561

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
           + F  L    DM +K       +   L++  C+ GDI  A     +ML     P  I Y+
Sbjct: 562 EVFLKLLNQGDMAKK------ASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYS 615

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            +L  LC+ G +  A   + V    G  PD ++Y  +I   C    + +A +    M  +
Sbjct: 616 KILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRR 675

Query: 396 SVVPEPHIWNVIIDG------------YGRCGDLSNAFS--IRDLMLSFGVSSNVFTFNA 441
            + P+   + V++DG            +G+    S   S  +RD M    ++ +V  +  
Sbjct: 676 GIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRD-MEQMKINPDVVCYTV 734

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           L+    +  +   A SL  +M+  G+ PD  TY  L+   CN GH+  A+ L +EM  +G
Sbjct: 735 LMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKG 794

Query: 502 ITPDIITYTELIKG 515
           +TPD+   + L +G
Sbjct: 795 MTPDVHIISALKRG 808



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 196/407 (48%), Gaps = 12/407 (2%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
           ++G +PDVLT N+L N L + G+++KA  V  ++      PNC TY   I   C+  +L 
Sbjct: 188 RRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLK 247

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCK--KGLLGDAVKFLGEVLADDDGKATSDVIT 263
           + L +F  M   G+ P+       +  LC   +  LG  V     + A   G A  +V  
Sbjct: 248 QPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEV-----LQAFRKGNAPLEVYA 302

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            T ++  +       +A  +++DM ++ +  D+  Y+ LI+G+C + ++  A A   +M+
Sbjct: 303 YTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMI 362

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            RG   + +  + +L+CL + G   E    +  L ++G+  D ++Y  +   LC+ G + 
Sbjct: 363 SRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVE 422

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A E +  M  K +  +   +  +I+GY   GDL  AF++   M   G+  ++ T+N L 
Sbjct: 423 DAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLA 482

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
              +R G   +   L   M   G+ P+  T+ ++I   C+ G + L  ++Y   L     
Sbjct: 483 AGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKV-LEAEVYFNSLE---D 538

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLG-LAIDHIPFRILKK 549
            +I  Y+ ++ G+C    +K++ EVF K+   G +A     F++L K
Sbjct: 539 KNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSK 585



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 150/359 (41%), Gaps = 40/359 (11%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            +N F+     +N  DKA+         GI P+ +T N L + L + G +  A+    ++
Sbjct: 162 AFNGFVKTCVSLNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQL 221

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
                     +  T  I++ +  K GD  Q L ++ +M +  +      +   I G C N
Sbjct: 222 ---KRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNN 278

Query: 310 GDISSAFAYFCQMLKRGFLP-DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
                 +    Q  ++G  P +V  Y  ++   C + KLDEA   +  + + GV PD   
Sbjct: 279 HRSDLGYEVL-QAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYV 337

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y ++I G C                                   +  +L  A ++ D M+
Sbjct: 338 YSSLIHGYC-----------------------------------KSHNLLRALALHDEMI 362

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
           S GV +N    + ++      G   +     KE+   G+F D   YN++  A C LG + 
Sbjct: 363 SRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVE 422

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            A+++ +EM  + +  D+  YT LI G+C +G++  A  +F +++  GL  D + + +L
Sbjct: 423 DAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVL 481



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 111/235 (47%), Gaps = 10/235 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC+ G I  A+ L  +M+     P  + ++ ++  LC+ GD++ A  +        
Sbjct: 582 LLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRG 641

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK------- 236
            +P+  TY   I  YCR+N L +A  LF  M   GI+P+ +T  +L+    K+       
Sbjct: 642 FTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFS 701

Query: 237 --GLLGDAVKFLGEVLAD-DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
             G       ++  +L D +  K   DV+  T+LMD + K  +  QA++L++ M +  ++
Sbjct: 702 SHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLE 761

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            D + Y  L++G C  G +  A     +M  +G  PDV   + L   + K  K+ 
Sbjct: 762 PDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISALKRGIIKARKVQ 816



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 84/188 (44%), Gaps = 2/188 (1%)

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           KA +FL     + ++P+    N + +     G++  A ++ + +  FG   N +T+  +I
Sbjct: 178 KAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVI 237

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            A  + G +     + +EM   G+ P  + +   I   CN     L  ++  +  R+G  
Sbjct: 238 KALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVL-QAFRKGNA 296

Query: 504 P-DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
           P ++  YT +++G C    + EA+ VF  ++  G+  D   +  L   Y +     +A  
Sbjct: 297 PLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALA 356

Query: 563 IHQKWLLR 570
           +H + + R
Sbjct: 357 LHDEMISR 364


>gi|242055653|ref|XP_002456972.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
 gi|241928947|gb|EES02092.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
          Length = 821

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 131/521 (25%), Positives = 228/521 (43%), Gaps = 94/521 (18%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC   K+  A  +     + G+ PD+  ++YL++  CK+G+LEKA + I +M    
Sbjct: 305 VIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIHSHCKMGNLEKAWYHIEDMVSHG 364

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              NC    + +    ++  + + +  F    + G+  + V +N+ + A CK G + +AV
Sbjct: 365 IEINCHIVGSLLQCLRKLGMISEVIVHFQKFRDLGLHLDGVLYNVAMDAYCKLGNMNEAV 424

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L E++A   G    D I  T L++ Y   G+   A  ++  M + NI+ D+V YN+L 
Sbjct: 425 KLLNEMMA---GGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILS 481

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV- 362
           +G+  NG +   F     M+ +G  P+ +TY   +   C+ G L EA   + ++ + G+ 
Sbjct: 482 SGYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKGID 541

Query: 363 ----------------------------------APDQISYKTIIQGLCIHGDIVKAREF 388
                                               D +S   +I GLC    + +A   
Sbjct: 542 NIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEASTV 601

Query: 389 LLSMLEKSVVPE-------------------PHIW---------------NVIIDGYGRC 414
              MLEK+VVP                     H+W                ++++GY + 
Sbjct: 602 CSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERGLSDVTAYTILMNGYCKV 661

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALI--------------LAETRGGSIFDA----- 455
           G L  A  +   M++ G+  +V  +  L+              +A+ R            
Sbjct: 662 GQLQEACELFVQMVNLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVL 721

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            S  KEM ++   PDV  Y +LI   C   ++  A  L+DEML +G+TPD+  YT LI G
Sbjct: 722 LSSMKEMEIE---PDVTCYTVLIYGQCKAEYLEEARGLFDEMLAKGLTPDVDAYTTLING 778

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           +C++G + +AE++F ++   G+  D + F +L +R  R ++
Sbjct: 779 YCSQGEIAKAEDLFQEMIDKGMKPDVLSFSVLHQRTLRHRK 819



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 207/465 (44%), Gaps = 45/465 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR------ 177
           V R L    K   A  +   MI+ G   DV  ++  +  LC  G  + A +++R      
Sbjct: 229 VTRSLFQANKADEAFRVWVGMIEMGVKLDVQGYSSFIIGLCDCGKYDLAYNMVRRYAVLQ 288

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           E+S+ R       YN  I G C+  +L++A  +      +G  P+   ++ L+H+ CK G
Sbjct: 289 EISQERVPIEAFAYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIHSHCKMG 348

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            L  A   + E +     +    ++ S  L+    K G   + +  +       +  D V
Sbjct: 349 NLEKAWYHI-EDMVSHGIEINCHIVGS--LLQCLRKLGMISEVIVHFQKFRDLGLHLDGV 405

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            YNV ++ +C  G+++ A     +M+  G +PD I Y  L+N  C +G+ + A   +  +
Sbjct: 406 LYNVAMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQM 465

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
            K  + PD ++Y  +  G   +G ++K  + L  M+++ + P    + + I G+ R G+L
Sbjct: 466 LKANIKPDVVTYNILSSGYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNL 525

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALI----------------LAETRGGSIFDAFSLKK- 460
           S A  + +++   G+ +    +++++                L   + G++ D  S  K 
Sbjct: 526 SEAEVLFNIVEEKGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKL 585

Query: 461 ------------------EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
                              ML   + P V +Y+ LI A C    +  A   + +M+ RG+
Sbjct: 586 INGLCRDEKVQEASTVCSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERGL 645

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + D+  YT L+ G+C  G ++EA E+F ++  LG+  D + + +L
Sbjct: 646 S-DVTAYTILMNGYCKVGQLQEACELFVQMVNLGIKPDVVAYTVL 689



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 184/415 (44%), Gaps = 55/415 (13%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I   CL G+   A  +  +M++    PDV+T+N L +   + G + K  
Sbjct: 435 LVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILSSGYSRNGLVMKVF 494

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++  M +    PN  TY   I G+CR   L +A  LF+ +   GI    V ++ +V   
Sbjct: 495 DLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKGIDNIDVLYSSMVCGY 554

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
              G    A      V    +     D ++ + L++   ++    +A  + + M +KN+ 
Sbjct: 555 LHSGWTDHAYMLFLRVAKQGN---MVDHLSCSKLINGLCRDEKVQEASTVCSMMLEKNVV 611

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
             +++Y+ LI+ +C + D+ +A  +F  M++RG L DV  Y  L+N  CK G+L EA   
Sbjct: 612 PHVISYSKLISAYCQSRDMRNAHLWFHDMVERG-LSDVTAYTILMNGYCKVGQLQEACEL 670

Query: 354 YGVLSKTGVAPDQISYKTIIQGLC-------IHGDIVKAREFLL---------SMLEKSV 397
           +  +   G+ PD ++Y  ++ G           G   + R F L         SM E  +
Sbjct: 671 FVQMVNLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLSSMKEMEI 730

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P+   + V+I  YG+C                          A  L E RG  +FD   
Sbjct: 731 EPDVTCYTVLI--YGQC-------------------------KAEYLEEARG--LFD--- 758

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
              EML  G+ PDV  Y  LI   C+ G I  A  L+ EM+ +G+ PD+++++ L
Sbjct: 759 ---EMLAKGLTPDVDAYTTLINGYCSQGEIAKAEDLFQEMIDKGMKPDVLSFSVL 810



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/398 (20%), Positives = 169/398 (42%), Gaps = 3/398 (0%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G VP +   N+L+  + +  D          M   + + +  + N       + N+ D+A
Sbjct: 183 GFVPTLWACNFLLKFVSQSSDSHMVVAAYDRMKCFQLTLDAQSLNIVTRSLFQANKADEA 242

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKG---LLGDAVKFLGEVLADDDGKATSDVITS 264
             ++  M   G++ +   ++  +  LC  G   L  + V+    +      +   +    
Sbjct: 243 FRVWVGMIEMGVKLDVQGYSSFIIGLCDCGKYDLAYNMVRRYAVLQEISQERVPIEAFAY 302

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
            +++D   K     +A  +     +     D+  Y+ LI+  C  G++  A+ +   M+ 
Sbjct: 303 NMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIHSHCKMGNLEKAWYHIEDMVS 362

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G   +     +LL CL K G + E    +      G+  D + Y   +   C  G++ +
Sbjct: 363 HGIEINCHIVGSLLQCLRKLGMISEVIVHFQKFRDLGLHLDGVLYNVAMDAYCKLGNMNE 422

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A + L  M+   +VP+   +  +I+GY   G+  NA+ + + ML   +  +V T+N L  
Sbjct: 423 AVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILSS 482

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
             +R G +   F L + M+  G+ P+  TY + I   C  G++  A  L++ +  +GI  
Sbjct: 483 GYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKGIDN 542

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             + Y+ ++ G+   G    A  +F ++   G  +DH+
Sbjct: 543 IDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHL 580



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/323 (21%), Positives = 139/323 (43%), Gaps = 8/323 (2%)

Query: 257 ATSDVITSTI--LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           ATS V++  +  L+ +Y    D  + + ++  + +      + A N L+     + D   
Sbjct: 147 ATSHVLSYAVNCLIKAYTTCHDAQETVDMFCHLCRLGFVPTLWACNFLLKFVSQSSDSHM 206

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
             A + +M       D  + N +   L +  K DEA   +  + + GV  D   Y + I 
Sbjct: 207 VVAAYDRMKCFQLTLDAQSLNIVTRSLFQANKADEAFRVWVGMIEMGVKLDVQGYSSFII 266

Query: 375 GLCIHG------DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           GLC  G      ++V+    L  + ++ V  E   +N++IDG  +   L  A  + ++  
Sbjct: 267 GLCDCGKYDLAYNMVRRYAVLQEISQERVPIEAFAYNMVIDGLCKEMKLEEAEKVLEIKT 326

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             G + +++ ++ LI +  + G++  A+   ++M+  GI  +      L+     LG I 
Sbjct: 327 RHGSTPDLYGYSYLIHSHCKMGNLEKAWYHIEDMVSHGIEINCHIVGSLLQCLRKLGMIS 386

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
             +  + +    G+  D + Y   +  +C  GNM EA ++  ++   GL  D I +  L 
Sbjct: 387 EVIVHFQKFRDLGLHLDGVLYNVAMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLI 446

Query: 549 KRYRRMKESDKARDIHQKWLLRN 571
             Y    E++ A  + ++ L  N
Sbjct: 447 NGYCLKGETENAWQVFEQMLKAN 469



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 115/297 (38%), Gaps = 64/297 (21%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCK--QGKLDEASHFYGVLSKTGVAPDQI----- 367
           AFAYF      GF  D  TY+ ++  L    QGK+   S F  +LS T     +I     
Sbjct: 82  AFAYFKDTHSLGFHHDFSTYSEIIQILSHSFQGKM-LVSLFCEILSGTDSGGPEILALID 140

Query: 368 ---------------------SYKT---------IIQGLCIHGDI--VKAREFLLSMLEK 395
                                +Y T         +   LC  G +  + A  FLL  + +
Sbjct: 141 HLRKTCATSHVLSYAVNCLIKAYTTCHDAQETVDMFCHLCRLGFVPTLWACNFLLKFVSQ 200

Query: 396 S-----------------VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
           S                 +  +    N++     +      AF +   M+  GV  +V  
Sbjct: 201 SSDSHMVVAAYDRMKCFQLTLDAQSLNIVTRSLFQANKADEAFRVWVGMIEMGVKLDVQG 260

Query: 439 FNALILAETRGG------SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           +++ I+     G      ++   +++ +E+  + +  + F YN++I   C    +  A +
Sbjct: 261 YSSFIIGLCDCGKYDLAYNMVRRYAVLQEISQERVPIEAFAYNMVIDGLCKEMKLEEAEK 320

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID-HIPFRILK 548
           + +   R G TPD+  Y+ LI  HC  GN+++A      + + G+ I+ HI   +L+
Sbjct: 321 VLEIKTRHGSTPDLYGYSYLIHSHCKMGNLEKAWYHIEDMVSHGIEINCHIVGSLLQ 377


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 213/443 (48%), Gaps = 3/443 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G++  AL +   M + G  P++L  N  ++   +   LEKA   +  M  +   PN  T
Sbjct: 258 AGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVT 317

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I GYC ++ +++A+ L   M + G  P++V++  ++  LCK+  + + V+ L + +
Sbjct: 318 YNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVE-VRDLMKKM 376

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
           A + G    D +T   L+    K+    +AL    D  +K  + D V Y+ +++  C  G
Sbjct: 377 AKEHG-LVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEG 435

Query: 311 DISSAFAYFCQMLKRGFLP-DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
            +S A     +ML +G  P DV+TY  ++N  C+ G++D+A     ++   G  P+ +SY
Sbjct: 436 RMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSY 495

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             ++ GLC  G  ++ARE +    E+   P    ++V++ G  + G LS A  +   M+ 
Sbjct: 496 TALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVL 555

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G        N L+ +  R G   +A    +E L  G   +V  +  +I   C    +  
Sbjct: 556 KGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDA 615

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           AL + D+M       D+ TYT L+     +G + EA E+  K+   G+    + +R +  
Sbjct: 616 ALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 675

Query: 550 RYRRMKESDKARDIHQKWLLRNK 572
           RY +M++ D    I +K +LR K
Sbjct: 676 RYCQMEKVDDLVAILEKMILRQK 698



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 200/410 (48%), Gaps = 5/410 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS-EM 182
           +IR  C   ++  A+ L   M  KG +PD +++  ++  LCK   + +   ++++M+ E 
Sbjct: 321 MIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEH 380

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +  TYN  I    + +  D+AL         G R ++V ++ +VHALCK+G + +A
Sbjct: 381 GLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEA 440

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              + E+L+   G    DV+T T +++ + + G+  +A  L   M     + + V+Y  L
Sbjct: 441 KDLINEMLS--KGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTAL 498

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +NG C  G    A        ++ + P+ ITY+ L++ L K+GKL EA      +   G 
Sbjct: 499 LNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGF 558

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  +    ++Q LC  G   +AR+F+   L K        +  +I G+ +  +L  A S
Sbjct: 559 FPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALS 618

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M      ++VFT+  L+ A  + G I +A  L K+ML  GI P   TY  +I   C
Sbjct: 619 VLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYC 678

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            +  +   + + ++M+ R     I  Y ++I+  C  G ++EA+++  K+
Sbjct: 679 QMEKVDDLVAILEKMILRQKCKTI--YNQVIEKLCGLGKLEEADKLLGKV 726



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 172/354 (48%), Gaps = 10/354 (2%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREM 179
           + A++  LC  G++  A  L  +M+ KG   PDV+T+  +VN  C++G+++KA  +++ M
Sbjct: 424 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIM 483

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
                 PN  +Y A + G CR  +  +A  + +        PN +T+++L+H L K+G L
Sbjct: 484 HTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKL 543

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +A   + E++         ++    +L+ S  ++G   +A     +   K    ++V +
Sbjct: 544 SEACDVVREMVLKGFFPGPVEI---NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNF 600

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
             +I+GFC N ++ +A +    M       DV TY TL++ L K+G++ EA+     +  
Sbjct: 601 TTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLH 660

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE--PHIWNVIIDGYGRCGDL 417
            G+ P  ++Y+T+I   C    +    + L+++LEK ++ +    I+N +I+     G L
Sbjct: 661 KGIDPTPVTYRTVIHRYCQMEKV----DDLVAILEKMILRQKCKTIYNQVIEKLCGLGKL 716

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
             A  +   +L     S+  T  AL+    + G    A+ +   M    + PDV
Sbjct: 717 EEADKLLGKVLRTASRSDAKTCYALMEGYLKIGVPLLAYKVACRMFNRNLIPDV 770



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 140/306 (45%), Gaps = 2/306 (0%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           +M SY + G    AL +   M +  ++ +++  N  I+ F     +  A  +  +M   G
Sbjct: 251 VMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVG 310

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            +P+V+TYN ++   C   +++EA      +   G  PD++SY TI+  LC    IV+ R
Sbjct: 311 IVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVR 370

Query: 387 EFLLSML-EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           + +  M  E  +V +   +N +I    +      A          G   +   ++A++ A
Sbjct: 371 DLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHA 430

Query: 446 ETRGGSIFDAFSLKKEMLLDG-IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
             + G + +A  L  EML  G   PDV TY  ++   C LG +  A +L   M   G  P
Sbjct: 431 LCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKP 490

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
           + ++YT L+ G C  G   EA E+    +    + + I + +L    R+  +  +A D+ 
Sbjct: 491 NTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVV 550

Query: 565 QKWLLR 570
           ++ +L+
Sbjct: 551 REMVLK 556



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 6/208 (2%)

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           D + Y ++++ L        AR  L+ M  + +   P  +  ++  Y R G L +A  + 
Sbjct: 209 DPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVL 268

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
            LM   GV  N+   N  I    R   +  A    + M + GI P+V TYN +I   C+L
Sbjct: 269 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 328

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI-QTLGLAIDHIP 543
             +  A++L D+M  +G  PD ++Y  ++   C    + E  ++  K+ +  GL  D + 
Sbjct: 329 HRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVT 388

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLRN 571
           +  L     +   +D+A      W L++
Sbjct: 389 YNTLIHMLTKHDHADEAL-----WFLKD 411



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 3/284 (1%)

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           W D  Q   + D + Y  ++           A      M +RG       +  ++    +
Sbjct: 199 WADR-QWRYRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSR 257

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            G+L +A     ++ + GV P+ +   T I        + KA  FL  M    +VP    
Sbjct: 258 AGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVT 317

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N +I GY     +  A  + D M S G   +  ++  ++    +   I +   L K+M 
Sbjct: 318 YNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMA 377

Query: 464 LD-GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
            + G+  D  TYN LI       H   AL    +   +G   D + Y+ ++   C  G M
Sbjct: 378 KEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRM 437

Query: 523 KEAEEVFAKIQTLG-LAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            EA+++  ++ + G    D + +  +   + R+ E DKA+ + Q
Sbjct: 438 SEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 481


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 190/394 (48%), Gaps = 3/394 (0%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           L+ + +V+  CK G ++ A  ++ E+       N   YN+ +  Y R    D    L   
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKE 208

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M N G+ P   T+ ILV  L + G +        E+   +      DV   + ++++Y +
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKN---VAGDVYFYSAVINAYCR 265

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G+  +A  ++++     ++ +   Y  LINGFC  G I +A      M  RG   + I 
Sbjct: 266 GGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIV 325

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           +NT+++  C+ G +++A     V+ K G+  D  +Y T+  GLC    +  A++ L  M 
Sbjct: 326 FNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMA 385

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           EK V P    +  +I  + + GD+  A  +   M   G   +V T+N +I    + GSI 
Sbjct: 386 EKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIR 445

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           +A   KKEM   G+ PD++TY  L+   C  G + +AL+L++EM  RG  P+++ YT L+
Sbjct: 446 EAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALV 505

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G    G  +EA +++  +   GL  D   + +L
Sbjct: 506 SGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVL 539



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 172/374 (45%), Gaps = 38/374 (10%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L ++M  +G  P V T+  LV+ L + GD+ K + V  EM     + +   Y+A I  YC
Sbjct: 205 LLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYC 264

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R   + +A  +F     +G+ PN  T+  L++  CK          +G++ A        
Sbjct: 265 RGGNVRRASEVFDECVGHGVEPNERTYGALINGFCK----------IGQIEA-------- 306

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
                               A  L  DM  + +  + + +N +I+G+C +G +  A    
Sbjct: 307 --------------------AEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIK 346

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M K G   D+ TYNTL   LC+  ++++A     ++++ GVAP+ +SY T+I      
Sbjct: 347 AVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKE 406

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           GD+V+AR     M  K   P    +NV+IDGY + G +  A   +  M   G+  +++T+
Sbjct: 407 GDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTY 466

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
             L+      G +  A  L +EM   G  P+V  Y  L+      G    A QLYD+ML 
Sbjct: 467 AGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLA 526

Query: 500 RGITPDIITYTELI 513
            G+TPD   Y+ L+
Sbjct: 527 AGLTPDDTLYSVLV 540



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 150/298 (50%), Gaps = 3/298 (1%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  +  D   + AVI   C GG +  A  +  + +  G  P+  T+  L+N  CKIG +E
Sbjct: 246 RKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIE 305

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A+ ++ +M       N   +N  I GYCR   ++KAL + + M   GI  +  T+N L 
Sbjct: 306 AAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLA 365

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             LC+   + DA K L  ++A+       + ++ T L+  + K GD  +A  L+ DM  K
Sbjct: 366 CGLCRVNRMEDAKKLL-HIMAEKG--VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGK 422

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             +  +V YNV+I+G+  NG I  A  +  +M K+G +PD+ TY  L++  C  GK+D A
Sbjct: 423 GSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVA 482

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
              +  +   G  P+ ++Y  ++ GL   G   +A +    ML   + P+  +++V++
Sbjct: 483 LRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 132/264 (50%), Gaps = 5/264 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E + R + A+I   C  G+I  A  L   M  +G   + +  N +++  C+ G +EKA 
Sbjct: 284 VEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKAL 343

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M +M    +  TYN    G CRVN ++ A  L   MA  G+ PN V++  L+   
Sbjct: 344 EIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIH 403

Query: 234 CKKGLLGDAVKFLGEVLADDDGKAT-SDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
            K+G + +A +       D +GK +   V+T  +++D Y KNG   +A     +M +K +
Sbjct: 404 AKEGDMVEARRLF----RDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGL 459

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             DI  Y  L++G C+NG +  A   F +M  RG  P+V+ Y  L++ L K+G+ +EA  
Sbjct: 460 VPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQ 519

Query: 353 FYGVLSKTGVAPDQISYKTIIQGL 376
            Y  +   G+ PD   Y  ++  L
Sbjct: 520 LYDDMLAAGLTPDDTLYSVLVGSL 543



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 155/337 (45%), Gaps = 6/337 (1%)

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A   LG+ +A      T   +++++++D + K+G    A  L +++ +  +  + 
Sbjct: 126 GQLPAAADLLGKAIASCPASVTP--LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNA 183

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             YN L++ +    +  +      +M  RG  P V TY  L++ L + G + +    Y  
Sbjct: 184 CCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDE 243

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + +  VA D   Y  +I   C  G++ +A E     +   V P    +  +I+G+ + G 
Sbjct: 244 MKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQ 303

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A  +   M   GV  N   FN +I    R G +  A  +K  M   GI  D++TYN 
Sbjct: 304 IEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNT 363

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L    C +  +  A +L   M  +G+ P+ ++YT LI  H   G+M EA  +F  ++  G
Sbjct: 364 LACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKG 423

Query: 537 LAIDHIPFRILKKRYRR---MKESDK-ARDIHQKWLL 569
                + + ++   Y +   ++E+++  +++ +K L+
Sbjct: 424 SRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLV 460



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 3/225 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G +  AL ++  M + G   D+ T+N L   LC++  +E A  ++  M+E  
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG 388

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            +PN  +Y   I+ + +  ++ +A  LF  M   G RP+ VT+N+++    K G + +A 
Sbjct: 389 VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAE 448

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +F  E+   +      D+ T   L+  +  NG    AL L+ +M  +  + ++VAY  L+
Sbjct: 449 RFKKEM---EKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALV 505

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
           +G    G    AF  +  ML  G  PD   Y+ L+  L    + D
Sbjct: 506 SGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSRKD 550


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 196/411 (47%), Gaps = 3/411 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A  L  +M+    +P ++    L+     +   E   +  ++M     S +  ++   I 
Sbjct: 55  AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            +CR + L  AL +   M   G  P+ VT   L+H  C    +GDA   +  +L    G 
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV--ILMVKSGY 172

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
             + V+ +T L+D   KNG+   AL L N+M +K +  D+V YN L+ G C +G  S A 
Sbjct: 173 EPNVVVYNT-LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
                M+KR   PDV+T+  L++   KQG LDEA   Y  + ++ V P+ ++Y +II GL
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C+HG +  A++    M  K   P    +N +I G+ +   +     +   M   G ++++
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           FT+N LI    + G +  A  +   M+   + PD+ T+ +L+   C  G I  AL  +D+
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           M        I+ Y  +I G C    +++A E+F ++   G+  D   + I+
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 176/359 (49%), Gaps = 7/359 (1%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
            E A  +  EM   +P P+   +   +T    +   +  ++    M   GI  +  +  I
Sbjct: 52  FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN--GDKFQALALWND 286
           L+H  C+   L  A+  LG+++    G   S V   ++L      N  GD F  + L   
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMM--KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL--- 166

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +   + ++V YN LI+G C NG+++ A     +M K+G   DV+TYNTLL  LC  G+
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
             +A+     + K  + PD +++  +I      G++ +A+E    M++ SV P    +N 
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           II+G    G L +A    DLM S G   NV T+N LI    +   + +   L + M  +G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
              D+FTYN LI   C +G + +AL ++  M+ R +TPDIIT+  L+ G C  G ++ A
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 181/379 (47%), Gaps = 3/379 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C   ++  AL +  KM++ G  P ++T   L++  C +  +  A  ++  M +  
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN   YN  I G C+  EL+ AL L + M   G+  + VT+N L+  LC  G   DA 
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + L +++         DV+T T L+D + K G+  +A  L+ +M Q ++  + V YN +I
Sbjct: 232 RMLRDMMKRS---INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C++G +  A   F  M  +G  P+V+TYNTL++  CK   +DE    +  +S  G  
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D  +Y T+I G C  G +  A +    M+ + V P+     +++ G    G++ +A   
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            D M        +  +N +I    +   +  A+ L   + ++G+ PD  TY ++I   C 
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468

Query: 484 LGHIHLALQLYDEMLRRGI 502
            G    A +L   M   GI
Sbjct: 469 NGPRREADELIRRMKEEGI 487



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 149/301 (49%), Gaps = 8/301 (2%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           L+ L  M   G     L  D   +  ++  LC  G+   A  + R M+++   PDV+T  
Sbjct: 196 LELLNEMEKKG-----LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            L++   K G+L++A  + +EM +    PN  TYN+ I G C    L  A   F  MA+ 
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G  PN VT+N L+   CK  ++ + +K    +  +      +D+ T   L+  Y + G  
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG---FNADIFTYNTLIHGYCQVGKL 367

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             AL ++  M  + +  DI+ + +L++G C+NG+I SA   F  M +      ++ YN +
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           ++ LCK  K+++A   +  L   GV PD  +Y  +I GLC +G   +A E +  M E+ +
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487

Query: 398 V 398
           +
Sbjct: 488 I 488



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 143/297 (48%), Gaps = 3/297 (1%)

Query: 272 FKNGDKFQ-ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK-RGFLP 329
           F +  +F+ A AL+ +M        IV +  L+     N        YF Q ++  G   
Sbjct: 46  FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTA-TANLRRYETVIYFSQKMELYGISH 104

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           D+ ++  L++C C+  +L  A    G + K G  P  +++ +++ G C+   I  A   +
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
           + M++    P   ++N +IDG  + G+L+ A  + + M   G+ ++V T+N L+      
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G   DA  + ++M+   I PDV T+  LI      G++  A +LY EM++  + P+ +TY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             +I G C  G + +A++ F  + + G   + + +  L   + + +  D+   + Q+
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 108/231 (46%)

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L  GF  +     AFA F +M+    LP ++ +  LL       + +   +F   +   G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           ++ D  S+  +I   C    +  A   L  M++    P    +  ++ G+     + +AF
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           S+  LM+  G   NV  +N LI    + G +  A  L  EM   G+  DV TYN L+   
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           C  G    A ++  +M++R I PD++T+T LI     +GN+ EA+E++ ++
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 198/420 (47%), Gaps = 15/420 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ LC  GKI  A     +M ++  VPDV T+N +++ LCK   + +A     E  E  
Sbjct: 41  LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI----EFFETM 96

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P P+  TYN  + G C+   + +A  LF +M   GI P+ VT+  L+   CK      A 
Sbjct: 97  PEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAY 156

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L +++A    K +  V +   +++   KN    QA  L+ +M     + D V YN LI
Sbjct: 157 GLL-QLMASR--KCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLI 213

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C+   +  A      M++ GF PD IT+  L+  LC   ++ EA   +  ++K G A
Sbjct: 214 HGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCA 273

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI-WNVIIDGYGRCGDLSNAFS 422
           PD +++  ++  LCI   + K R  L  +      PE  I +  I    GR      A  
Sbjct: 274 PDLVTHTVLVSKLCI---LRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAAR 330

Query: 423 IRDLMLSFGVSSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           +   M   GV  NV T+ A    L + + G    A+   + ML  GI PD+  YN+L+  
Sbjct: 331 LLQKMARRGVPPNVVTYTAFFKGLGDWKEG--MRAYREFRRMLEQGIEPDMVAYNVLVDG 388

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    + +A ++   M + G+ P+I+TY  L+  HC +G ++   E+   + + G   D
Sbjct: 389 FCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPD 448



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 183/430 (42%), Gaps = 46/430 (10%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T N L++ L +    E+   V R +      PN  +Y   +   CR  ++DKA    + 
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           MA   + P+  T+N+++  LCK   +  A++F  E + +       DV+T   L+    K
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFF-ETMPE------PDVVTYNTLLGGLCK 113

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           NG   QA +L+  M    I    V Y  LI+ FC      +A+     M  R   P V +
Sbjct: 114 NGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYS 173

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y +++N LCK  K+D+A   +  +   G  PD+++Y T+I GLC+   + +A++ L  M+
Sbjct: 174 YCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMV 233

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI---------- 443
           E    P+   +  +I+G      +  AF +   M   G + ++ T   L+          
Sbjct: 234 ENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLR 293

Query: 444 -------------------------LAETRGGSIFD-AFSLKKEMLLDGIFPDVFTYNLL 477
                                    L   RG   FD A  L ++M   G+ P+V TY   
Sbjct: 294 PALSVVRNYPACPEAVILYTPIFRELGRRRG---FDRAARLLQKMARRGVPPNVVTYTAF 350

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
                +      A + +  ML +GI PD++ Y  L+ G C    +  AE++   +   GL
Sbjct: 351 FKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGL 410

Query: 538 AIDHIPFRIL 547
             + + +  L
Sbjct: 411 PPNIVTYNTL 420



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 184/390 (47%), Gaps = 11/390 (2%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   +  ++  LC  G++  A  L   M   G  P  +T+  L++  CK+   E A  
Sbjct: 98  EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYG 157

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +++ M+  + SP   +Y + I G C+  ++D+A  LF  M   G +P+RVT+N L+H LC
Sbjct: 158 LLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLC 217

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
            K  L +A K L  V+ ++  +   D IT T L++         +A  L+  M ++    
Sbjct: 218 VKQRLHEA-KDLLTVMVENGFQ--PDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAP 274

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF--LPD-VITYNTLLNCLCKQGKLDEAS 351
           D+V + VL++  C+   +  A +     + R +   P+ VI Y  +   L ++   D A+
Sbjct: 275 DLVTHTVLVSKLCILRKLRPALS-----VVRNYPACPEAVILYTPIFRELGRRRGFDRAA 329

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                +++ GV P+ ++Y    +GL    + ++A      MLE+ + P+   +NV++DG+
Sbjct: 330 RLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGF 389

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +   L  A  +   M   G+  N+ T+N L+    R G +     L   M+  G  PDV
Sbjct: 390 CKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDV 449

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
            T++ L+     +G    A    +  + +G
Sbjct: 450 ATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 4/131 (3%)

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           N  ++  L+ A  R G I  A S   EM  + + PDVFTYN++I   C    I  A++ +
Sbjct: 34  NALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFF 93

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           + M      PD++TY  L+ G C  G + +A  +F  ++  G+    + +  L   + +M
Sbjct: 94  ETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKM 149

Query: 555 KESDKARDIHQ 565
            + + A  + Q
Sbjct: 150 CQFETAYGLLQ 160



 Score = 46.6 bits (109), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 25/105 (23%), Positives = 47/105 (44%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  ++   C   ++  A  + R M Q G  P+++T+N LV   C+ G +E   
Sbjct: 375 IEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIG 434

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
            ++  M      P+ AT++  + G   V + D A    +   + G
Sbjct: 435 ELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 202/417 (48%), Gaps = 4/417 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G + +A+ L R+M + G   +V T   L++  CK G++++A  +  +M +  
Sbjct: 446 LIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSS 505

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T+N  I GYCRV  + KA  L+  M + G+ P+  T+  L+  LC       A 
Sbjct: 506 VVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAK 565

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +F+ ++   ++     +  + T LM  + K G   +   +W++M  + ++ D++++ V++
Sbjct: 566 EFVDDL---ENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIV 622

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
                  D       F +M ++G  PD + +  +++   K+  + +A + +  +   G +
Sbjct: 623 YAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCS 682

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y  +I  LC  G +  A+     ML    +P    +N  +D     G+L  A  +
Sbjct: 683 PNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVL 742

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              +L  G  +N  TFN LI    + G I  A  L +     G FPD  +Y+ +I   C 
Sbjct: 743 HATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCK 801

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           +G I+ A QL++EML +G+ PDI+ Y  LI+     G   +   +++ +  L  A D
Sbjct: 802 VGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMVNLKYADD 858



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 213/447 (47%), Gaps = 41/447 (9%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E  YR    ++   C   ++  AL +   M+    VP V + +++V+ L K G ++KA  
Sbjct: 265 EVTYR---TLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFR 321

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +   + E+   PN    NA I   C+     +A  LF  MAN G+ PN VT+ IL+H+LC
Sbjct: 322 LACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLC 381

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K+G++ DA+    + + +   + T  V     L++ Y ++ +  QA  L N+M +K +  
Sbjct: 382 KRGMMDDALCMF-DRMREKGIRVT--VYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAP 438

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
              +Y+ LI G C  GD++SA     +M + G   +V T+ TL++  CK G +DEA+  +
Sbjct: 439 SAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLF 498

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID----- 409
             +  + V P+++++  +I+G C  G++ KA +    M+++ + P+ + +  +I      
Sbjct: 499 DKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLT 558

Query: 410 ----------------------------GYGRC--GDLSNAFSIRDLMLSFGVSSNVFTF 439
                                        YG C  G L+  + I D M + GV  ++ +F
Sbjct: 559 LGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISF 618

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
             ++ A  +         L +EM   G+ PD   +  +I       +I  AL  +D+M+ 
Sbjct: 619 TVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIA 678

Query: 500 RGITPDIITYTELIKGHCARGNMKEAE 526
            G +P+++TYT LI   C  G +  A+
Sbjct: 679 DGCSPNVVTYTVLINHLCKSGYLSSAQ 705



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 192/387 (49%), Gaps = 4/387 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+Q     D   +   +   C+I +L+ A  ++  M       +   YN  + G CR N
Sbjct: 185 EMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNN 244

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            + +A+ + ++M   GI  + VT+  LV+  C+   L  A++   ++L+         V 
Sbjct: 245 RVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSL---HFVPSVA 301

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           + + ++D   K G   +A  L   + +  +  ++ A N LI+  C +     A   F  M
Sbjct: 302 SCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGM 361

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
             RG  P+ +TY  L++ LCK+G +D+A   +  + + G+      Y ++I G C H + 
Sbjct: 362 ANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNF 421

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +AR  L  M+EK + P    ++ +I G  R GDL++A  +   M   GVS NV+TF  L
Sbjct: 422 HQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTL 481

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    + G++ +A  L  +M+   + P+  T+N++I   C +G++  A QLYD+M+ RG+
Sbjct: 482 ISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGL 541

Query: 503 TPDIITYTELIKGHC-ARGNMKEAEEV 528
           TPD  TY  LI   C   G MK  E V
Sbjct: 542 TPDNYTYRSLISVLCLTLGAMKAKEFV 568



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 208/415 (50%), Gaps = 3/415 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC   ++  A+ ++  M+++G V D +T+  LV   C+  +LE A  +  +M  +   P+
Sbjct: 240 LCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPS 299

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
            A+ +  + G  +   +DKA  L   +   G+ PN    N L+  LCK     +A +   
Sbjct: 300 VASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFR 359

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
            +   + G   ++V T  IL+ S  K G    AL +++ M +K I+  +  YN LING+C
Sbjct: 360 GM--ANRGLEPNEV-TYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYC 416

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            + +   A     +M+++G  P   +Y+ L+  LC++G L  A   +  +++ GV+ +  
Sbjct: 417 QHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVY 476

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           ++ T+I G C  G++ +A      M++ SVVP    +NV+I+GY R G++  AF + D M
Sbjct: 477 TFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQM 536

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +  G++ + +T+ +LI           A     ++  + +  + F+   L+   C  G +
Sbjct: 537 VDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRL 596

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
                ++DEM  RG+  D+I++T ++       + ++   +F +++  G+  D++
Sbjct: 597 TETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNV 651



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 209/459 (45%), Gaps = 10/459 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE +   +  +I  LC  G +  AL +  +M +KG    V  +N L+N  C+  +  +A 
Sbjct: 366 LEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQAR 425

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ EM E   +P+ A+Y+  I G CR  +L  A+ L   MA NG+  N  T   L+   
Sbjct: 426 GLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGF 485

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G + +A +   +++   D     + +T  ++++ Y + G+  +A  L++ M  + + 
Sbjct: 486 CKDGNMDEAARLFDKMI---DSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLT 542

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D   Y  LI+  CL      A  +   +     + +  +  TL+   CK+G+L E  H 
Sbjct: 543 PDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHI 602

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  +   GV  D IS+  I+       D  K       M EK V P+      +ID + +
Sbjct: 603 WDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSK 662

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
             ++  A +  D M++ G S NV T+  LI    + G +  A  L +EML+    P+ FT
Sbjct: 663 EENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFT 722

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           YN  +    N G +  A  L+  +L  G   + +T+  LIKG C  G ++ A ++     
Sbjct: 723 YNCFLDFLANEGELEKAKVLHATIL-EGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNT 781

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
             G   D I +  +      + E  K  DI++ + L N+
Sbjct: 782 ESGFFPDCISYSTI------INELCKVGDINKAFQLWNE 814



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 203/406 (50%), Gaps = 3/406 (0%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R  +  G      T + ++  L KI     A  +  EM + +   +   Y A I  YC +
Sbjct: 149 RLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEI 208

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
             LD A  L + M + G++ + V +N+L++ LC+   + +AV+    ++   +    +D 
Sbjct: 209 RNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMV---ERGIVADE 265

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T   L+  + +  +   AL + +DM   +    + + + +++G    G I  AF   C 
Sbjct: 266 VTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACH 325

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           + + G +P++   N L++ LCK  +  EA   +  ++  G+ P++++Y  +I  LC  G 
Sbjct: 326 LGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGM 385

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           +  A      M EK +    + +N +I+GY +  +   A  + + M+  G++ +  +++ 
Sbjct: 386 MDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSP 445

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI    R G +  A  L +EM  +G+  +V+T+  LI   C  G++  A +L+D+M+   
Sbjct: 446 LIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSS 505

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + P+ +T+  +I+G+C  GN+++A +++ ++   GL  D+  +R L
Sbjct: 506 VVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSL 551



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 205/454 (45%), Gaps = 11/454 (2%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V+C    D   + A IR  C    +  A  L  +M  KG     + +N L+  LC+   +
Sbjct: 187 VQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRV 246

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A  V   M E     +  TY   + G+CR  EL+ AL +   M +    P+  + + +
Sbjct: 247 LEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFM 306

Query: 230 VHALCKKGLLGDAVKF---LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           V  L K+G +  A +    LGE+          ++     L+D   K+    +A  L+  
Sbjct: 307 VDGLRKRGHIDKAFRLACHLGEL------GMVPNLFACNALIDKLCKDRRFREAERLFRG 360

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M  + ++ + V Y +LI+  C  G +  A   F +M ++G    V  YN+L+N  C+   
Sbjct: 361 MANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDN 420

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
             +A      + + G+AP   SY  +I GLC  GD+  A E    M    V    + +  
Sbjct: 421 FHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTT 480

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +I G+ + G++  A  + D M+   V  N  TFN +I    R G++  AF L  +M+  G
Sbjct: 481 LISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRG 540

Query: 467 IFPDVFTYNLLIGASC-NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           + PD +TY  LI   C  LG +  A +  D++    +  +  + T L+ G C  G + E 
Sbjct: 541 LTPDNYTYRSLISVLCLTLGAMK-AKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTET 599

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
             ++ +++  G+ +D I F ++     ++ + +K
Sbjct: 600 YHIWDEMRARGVKLDLISFTVIVYAALKLHDGEK 633


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 195/406 (48%), Gaps = 17/406 (4%)

Query: 123 AVIRDLCL-GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           AV+R L   GG +  AL L  +M+  G +P+  T+N L++ LCK G    A  +  EM  
Sbjct: 180 AVLRVLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMIS 239

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
              +PN  T+   ++  C   +L +A +L  +M + G  P+ VT+N  +  LCK G + +
Sbjct: 240 RGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDE 299

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF-QKNIQTDIVAYN 300
           A++ L  +     G     +   + L+D  F  G   +    + ++  Q ++  DIV Y 
Sbjct: 300 AIERLEAL--RHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYT 357

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           ++I G    G  + AFA+F +M ++GF PD   YNTLL  LC  G LD A      + + 
Sbjct: 358 IMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRN 417

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            V  D  +Y T+I GLC    + +A +    M+E    P    +NV+IDG  R   L  A
Sbjct: 418 NVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEA 477

Query: 421 FSI---------RDLMLSFGVSSNVF----TFNALILAETRGGSIFDAFSLKKEMLLDGI 467
             +           L L   + +N      T   L+ +  + G +  A+ L + ++  G+
Sbjct: 478 RMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGV 537

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            PDV TYN L+   C + ++  AL+L+ E+  +G   D ITY  LI
Sbjct: 538 VPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLI 583



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/476 (23%), Positives = 211/476 (44%), Gaps = 58/476 (12%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC  G    AL L  +MI +G  P+V TH  L++ +C  G L++A++++  M +  
Sbjct: 217 LIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKG 276

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT-HNILVHALCKKGLLGDA 242
             P+  TYNAF++G C+   +D+A+     + + G     +  ++ L+  L   G   + 
Sbjct: 277 CPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEG 336

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +   EVL   D   + D++  TI++    + G    A A +++M +K    D   YN L
Sbjct: 337 FQCYMEVLEQAD--VSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTL 394

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +   C  GD+  A +   +M++   + D+ TY T++  LCK+  +DEA   +  + + G 
Sbjct: 395 LKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGC 454

Query: 363 APDQISYKTIIQGL---------------------------------------------- 376
            P  ++Y  +I GL                                              
Sbjct: 455 HPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVE 514

Query: 377 --CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVS 433
             C  G ++KA + L  +++  VVP+   +N +++G  +  +L  A  + R+L +  G  
Sbjct: 515 SMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVK-GFP 573

Query: 434 SNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
            +  T+  LI +  R     DA +L +++L  G  P +  YN ++ + C +  +  A+ L
Sbjct: 574 LDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINL 633

Query: 494 YDEMLRRGITPDIITYTELI---KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           + + L R    +++   E+I   +     G + EA     KI     +++  P+ I
Sbjct: 634 WFDHLPRKY--NLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVNSCPYTI 687



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 160/356 (44%), Gaps = 3/356 (0%)

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G++P       L+ A    G   +AV+    +  +   + T+  + + +L       G  
Sbjct: 134 GLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTT-FVYNAVLRVLVASGGAV 192

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             ALAL+N M       +   YNVLI+G C  G    A   F +M+ RG  P+V T+  L
Sbjct: 193 PLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTIL 252

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-S 396
           L+ +C  G+L EA +    +   G  PD+++Y   + GLC  G + +A E L ++    +
Sbjct: 253 LSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGT 312

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFS-IRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
            V     ++ +IDG    G     F    +++    VS ++  +  +I      G   DA
Sbjct: 313 FVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDA 372

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           F+   EM   G  PD F YN L+ A C+ G +  A  L  EM+R  +  DI TYT +I G
Sbjct: 373 FAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIG 432

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            C    + EA +VF  +  +G     + + +L     R    ++AR +  K  + N
Sbjct: 433 LCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGN 488



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 163/353 (46%), Gaps = 7/353 (1%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKG-LLGDAV 243
           P  A + A I  +       +A+  FS M    G RP    +N ++  L   G  +  A+
Sbjct: 137 PPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLAL 196

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
                ++A        +  T  +L+    K G    AL L+++M  + I  ++  + +L+
Sbjct: 197 ALYNRMVA---AGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILL 253

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G +  A      M  +G  PD +TYN  L+ LCK G++DEA      L  TG  
Sbjct: 254 SSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTF 313

Query: 364 PDQI-SYKTIIQGLCIHGDIVKAREFLLSMLEKS-VVPEPHIWNVIIDGYGRCGDLSNAF 421
              +  Y  +I GL + G   +  +  + +LE++ V P+  ++ ++I G    G  ++AF
Sbjct: 314 VLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAF 373

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           +  D M   G + + F +N L+ A    G +  A SL  EM+ + +  D+ TY  +I   
Sbjct: 374 AFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGL 433

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           C    +  A+Q++D M+  G  P ++TY  LI G      ++EA  +F K++ 
Sbjct: 434 CKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEV 486



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 122/267 (45%), Gaps = 10/267 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +IR     G+   A     +M +KG  PD   +N L+  LC  GDL+ A  ++ EM 
Sbjct: 356 YTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMV 415

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                 +  TY   I G C+   +D+A+ +F  M   G  P+ +T+N+L+  L +   L 
Sbjct: 416 RNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLE 475

Query: 241 DAVKFLGEVLADDD----------GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           +A     ++   ++               D  T   L++S  ++G   +A  L   +   
Sbjct: 476 EARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDS 535

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            +  D+V YN L+NG C   ++  A   F ++  +GF  D ITY TL++ L +  + ++A
Sbjct: 536 GVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDA 595

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLC 377
              +  +  +G  P    Y ++++ LC
Sbjct: 596 LTLFQDILHSGGTPSMPIYNSMMRSLC 622



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 33/260 (12%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  +C  G++  A  L R +I  G VPDV+T+N L+N LCK+ +L+ A  + RE+    
Sbjct: 512 LVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKG 571

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TY   I    R +  + AL LF  + ++G  P+   +N ++ +LC+   L  A+
Sbjct: 572 FPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAI 631

Query: 244 -------------------------KF--------LGEVLADDDGKATSDVITSTILMDS 270
                                    KF        + E++  D    + +    TI +  
Sbjct: 632 NLWFDHLPRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVNSCPYTIWLIG 691

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             + G    AL +++ + +  I         L    CL G++ +A       LK+GF   
Sbjct: 692 LIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGNLGAAVDVMLYTLKKGFTMR 751

Query: 331 VITYNTLLNCLCKQGKLDEA 350
               N LL  LC   +  +A
Sbjct: 752 RYVGNRLLCSLCIHHRRKDA 771



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 25/245 (10%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR  +  D   +  +I  LC    +  A+ +   M++ G  P V+T+N L++ L +   L
Sbjct: 415 VRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRL 474

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E+A  +  +M E+  +P+                    L L  T+  N +R +  T   L
Sbjct: 475 EEARMLFYKM-EVGNNPS--------------------LFLRLTLGANQVRDSE-TLQKL 512

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           V ++C+ G +  A K L  ++   D     DV+T   L++   K  +   AL L+ ++  
Sbjct: 513 VESMCQSGQVLKAYKLLRGII---DSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQV 569

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K    D + Y  LI+        + A   F  +L  G  P +  YN+++  LC+  KL +
Sbjct: 570 KGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQ 629

Query: 350 ASHFY 354
           A + +
Sbjct: 630 AINLW 634


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 213/429 (49%), Gaps = 6/429 (1%)

Query: 121 HV-AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
           HV  +I+    G K   AL L  +  + G + +V   N +++ LCK G  ++A  ++ +M
Sbjct: 411 HVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKM 469

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
                 PN  +YN  + G+CR   +D A  +FS +   G++PN  T++IL+    +    
Sbjct: 470 ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDE 529

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ-KNIQTDIVA 298
            +A++ +  + + +     + V+  TI+ +   K G   +A  L  +M + K +    ++
Sbjct: 530 QNALEVVNHMTSSN--IEVNGVVYQTII-NGLCKVGQTSKARELLANMIEEKRLCVSCMS 586

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           YN +I+GF   G++ SA A + +M   G  P+VITY +L+N LCK  ++D+A      + 
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
             GV  D  +Y  +I G C   ++  A      +LE+ + P   I+N +I G+   G++ 
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   ML  G+  ++ T+  LI    + G++  A  L  EM   G+ PD   Y +++
Sbjct: 707 AALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
                 G     +++++EM +  +TP+++ Y  +I GH   GN+ EA  +  ++   G+ 
Sbjct: 767 NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826

Query: 539 IDHIPFRIL 547
            D   F IL
Sbjct: 827 PDGATFDIL 835



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 216/473 (45%), Gaps = 41/473 (8%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS-PNCATY 191
           K   AL +  + I++G  PD L ++  V   CK  DL  A+ ++REM E +   P+  TY
Sbjct: 248 KPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETY 307

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
            + I    +   +D A+ L   M ++GI  N V    L+   CK   L  A+    ++  
Sbjct: 308 TSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM-- 365

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
           + +G + + V T ++L++ + KNG+  +AL  +  M    +   +   + +I G+     
Sbjct: 366 EKEGPSPNSV-TFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
              A   F +  + G L +V   NT+L+ LCKQGK DEA+     +   G+ P+ +SY  
Sbjct: 425 HEEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++ G C   ++  AR    ++LEK + P  + ++++IDG  R  D  NA  + + M S  
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543

Query: 432 VSSN------------------------------------VFTFNALILAETRGGSIFDA 455
           +  N                                      ++N++I    + G +  A
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
            +  +EM  +GI P+V TY  L+   C    +  AL++ DEM  +G+  DI  Y  LI G
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDG 663

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            C R NM+ A  +F+++   GL      +  L   +R +     A D+++K L
Sbjct: 664 FCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 231/500 (46%), Gaps = 46/500 (9%)

Query: 84  QAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRK 143
           QA    LDL +  +L  L+ M++      + ET    + +VI      G +  A+ L+ +
Sbjct: 276 QACCKTLDLAMANSL--LREMKEKKLCVPSQET----YTSVILASVKQGNMDDAIRLKDE 329

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G   +V+    L+   CK  DL  A  +  +M +  PSPN  T++  I  + +  E
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGE 389

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           ++KAL  +  M   G+ P+    + ++    K     +A+K   E          ++V  
Sbjct: 390 MEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE----TGLANVFV 445

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              ++    K G   +A  L + M  + I  ++V+YN ++ G C   ++  A   F  +L
Sbjct: 446 CNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL 505

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           ++G  P+  TY+ L++   +      A      ++ + +  + + Y+TII GLC  G   
Sbjct: 506 EKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTS 565

Query: 384 KAREFLLSML-EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
           KARE L +M+ EK +      +N IIDG+ + G++ +A +  + M   G+S NV T+ +L
Sbjct: 566 KARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSL 625

Query: 443 I-----------LAETRG--------------GSIFDAF----------SLKKEMLLDGI 467
           +             E R               G++ D F          +L  E+L +G+
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            P    YN LI    NLG++  AL LY +ML+ G+  D+ TYT LI G    GN+  A E
Sbjct: 686 NPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE 745

Query: 528 VFAKIQTLGLAIDHIPFRIL 547
           ++ ++Q +GL  D I + ++
Sbjct: 746 LYTEMQAVGLVPDEIIYTVI 765



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 193/396 (48%), Gaps = 4/396 (1%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  GK   A  L  KM  +G  P+V+++N ++   C+  +++ A  V   + E    PN
Sbjct: 453 LCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPN 512

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY+  I G  R ++   AL + + M ++ I  N V +  +++ LCK G    A + L 
Sbjct: 513 NYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLA 572

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
            ++  ++ +     ++   ++D +FK G+   A+A + +M    I  +++ Y  L+NG C
Sbjct: 573 NMI--EEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLC 630

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            N  +  A     +M  +G   D+  Y  L++  CK+  ++ AS  +  L + G+ P Q 
Sbjct: 631 KNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQP 690

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            Y ++I G    G++V A +    ML+  +  +   +  +IDG  + G+L  A  +   M
Sbjct: 691 IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM 750

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
            + G+  +   +  ++   ++ G       + +EM  + + P+V  YN +I      G++
Sbjct: 751 QAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNL 810

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             A +L+DEML +GI PD  T+  L+ G    GN++
Sbjct: 811 DEAFRLHDEMLDKGILPDGATFDILVSGQV--GNLQ 844



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 1/241 (0%)

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
           A+N L+N +  +     A     QML+   +P     N  L+ L ++  L EA   Y  +
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRM 224

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
              GV  D ++ + +++         +A E L   +E+   P+  ++++ +    +  DL
Sbjct: 225 VAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDL 284

Query: 418 SNAFS-IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           + A S +R++        +  T+ ++ILA  + G++ DA  LK EML DGI  +V     
Sbjct: 285 AMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATS 344

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C    +  AL L+D+M + G +P+ +T++ LI+     G M++A E + K++ LG
Sbjct: 345 LITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG 404

Query: 537 L 537
           L
Sbjct: 405 L 405



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 112/219 (51%), Gaps = 3/219 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + +++  LC   ++  AL +R +M  KG   D+  +  L++  CK  ++E A  +  E+ 
Sbjct: 622 YTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELL 681

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   +P+   YN+ I+G+  +  +  AL L+  M  +G+R +  T+  L+  L K G L 
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A +   E+ A        D I  T++++   K G   + + ++ +M + N+  +++ YN
Sbjct: 742 LASELYTEMQAVG---LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYN 798

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
            +I G    G++  AF    +ML +G LPD  T++ L++
Sbjct: 799 AVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 837



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 63/133 (47%), Gaps = 5/133 (3%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           LD  K M   G +RC L T    +  +I  L   G +  A  L  +M   G VPD + + 
Sbjct: 709 LDLYKKMLKDG-LRCDLGT----YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYT 763

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            +VN L K G   K   +  EM +   +PN   YNA I G+ R   LD+A  L   M + 
Sbjct: 764 VIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 823

Query: 218 GIRPNRVTHNILV 230
           GI P+  T +ILV
Sbjct: 824 GILPDGATFDILV 836


>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
 gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
          Length = 500

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 202/420 (48%), Gaps = 10/420 (2%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM-S 180
            ++I  L    ++G A      M   G  PDV+T   L+   CK   +E+A  + +EM  
Sbjct: 15  ASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEIFQEMIK 74

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTM-ANNGIRPNRVTHNILVHALCKKGLL 239
             R  P+C  Y   I GYC+   +D+AL L   M     I+P+ V +N +V  LC+    
Sbjct: 75  SNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRF 134

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +A KFL E +       T  V+T T L+    K      A+ +WN M ++ IQ  IV+Y
Sbjct: 135 LEAWKFLDETMVRQGCSPT--VVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSY 192

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           +V+I+G    G +  A+    +M   G   +V+ Y TL++ LCK G LD+A   Y ++ +
Sbjct: 193 SVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKR 252

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
           +G  P+Q +Y T+I   C   D  +    L   +      +  ++  ++ G  R   L +
Sbjct: 253 SGAFPNQRTYATLIDTFC-RNDRTETALGLFDHIRDYCPLDVAMYTAVVSGLCRERRLDD 311

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLI 478
           A ++   M   GVS++   +N L+    R G   +AF + +E+  D G   ++ TYN +I
Sbjct: 312 ARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVI 371

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C    +   + L+ EM +RGI PD  TY+ LI      G ++ A ++  ++   GL+
Sbjct: 372 AGCC----LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASGLS 427



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 170/344 (49%), Gaps = 9/344 (2%)

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
           PN+     L+ AL K   LGDA + L E++ D       DV+T T L+  + KN    +A
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARAL-ELMCD--AGIHPDVVTFTALIRGFCKNRMVERA 65

Query: 281 LALWNDMFQKN-IQTDIVAYNVLINGFCLNGDISSAFAYFCQM-LKRGFLPDVITYNTLL 338
             ++ +M + N  Q D   Y VLI+G+C    +  A     +M ++R   PDV+ YN+++
Sbjct: 66  WEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIV 125

Query: 339 NCLCKQGKLDEASHFYG-VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           + LC+  +  EA  F    + + G +P  ++Y ++I+G C    +  A     +MLE+ +
Sbjct: 126 DGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKI 185

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P    ++VIIDG  + G + +A+ +   M + G   NV  +  LI    + G + DA++
Sbjct: 186 QPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYA 245

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP-DIITYTELIKGH 516
           L + M   G FP+  TY  LI   C       AL L+D +  R   P D+  YT ++ G 
Sbjct: 246 LYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI--RDYCPLDVAMYTAVVSGL 303

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           C    + +A  +F +++  G++ D   + +L     R   S++A
Sbjct: 304 CRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEA 347



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 135/301 (44%), Gaps = 11/301 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++IR  C   K+  A+ +   M+++   P +++++ +++ L K G +  A  V+REM 
Sbjct: 157 YTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREME 216

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            +    N   Y   I G C+   LD A  L+  M  +G  PN+ T+  L+   C+     
Sbjct: 217 TLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTE 276

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A+     +          DV   T ++    +      A AL+ +M    +  D  AYN
Sbjct: 277 TALGLFDHI----RDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYN 332

Query: 301 VLINGFCLNGDISSAFAYFCQML-KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           VL++G   +G    AF    ++    G + +++TYNT++   C    L+     +  + +
Sbjct: 333 VLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQ 388

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG--YGRCGDL 417
            G+APD  +Y  +I  L   G+I +A +    ML   + P   +   ++    + R GDL
Sbjct: 389 RGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRGDL 448

Query: 418 S 418
           +
Sbjct: 449 A 449


>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Cucumis sativus]
          Length = 697

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 202/462 (43%), Gaps = 38/462 (8%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L    R + AV+  L     +  A    ++M     VPD  T+N L++ +C++G +++A 
Sbjct: 225 LNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEAL 284

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA- 232
            ++++M  +   PN  TY   I G+       +A  +  TM    + PN  T   LVH  
Sbjct: 285 RLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVHGV 344

Query: 233 ----------------------------------LCKKGLLGDAVKFLGEVLADDDGKAT 258
                                             L    +  +AV FL  +    +G   
Sbjct: 345 FRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFL--IKTGKEGYVP 402

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           S   T  I +    K  D      ++++  Q  ++     Y  LI      G +     Y
Sbjct: 403 SSS-TFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRY 461

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             +++  G + ++ +YN +++CLCK   +D AS  +  L   G++P+ ++Y T+I G C 
Sbjct: 462 MDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCR 521

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
           +G++ KA+E L  +LE    P+   +N +IDG  +     NAF     M+ + V  NV T
Sbjct: 522 NGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVIT 581

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +N LI +    G +  +  L ++M L GI PD F++N LI           A +L+D ML
Sbjct: 582 YNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSML 641

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           R GI PD  TY  LIK  C  G   +A E+F  ++  G   D
Sbjct: 642 RLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPD 683



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 186/420 (44%), Gaps = 40/420 (9%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           +P    YNA +    + N LD A   F  M+++   P+R T+NIL+H +C+ G++ +A++
Sbjct: 226 NPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALR 285

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            + ++   +      +V T TIL+D +F      +A  +   M ++N+  +      L++
Sbjct: 286 LMKQM---EGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVH 342

Query: 305 G---------------------------------FCL--NGDISSAFAYFCQMLKRGFLP 329
           G                                 +CL  N   S A  +  +  K G++P
Sbjct: 343 GVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVP 402

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
              T+N  L C+ K+  L      +    ++GV P   +Y T+I+ L   G +     ++
Sbjct: 403 SSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYM 462

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             ++   ++   + +N++ID   +   +  A  +   + + G+S N+ T+N LI    R 
Sbjct: 463 DRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRN 522

Query: 450 GSIFDAFSLKKEMLLDGIF-PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
           G++  A  L  EMLL+  F PD+FT+N LI   C       A   + EM+   + P++IT
Sbjct: 523 GNMDKAQELL-EMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVIT 581

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           Y  LI   CA G++  +  +  +++  G+  D   F  L + Y       KA  +    L
Sbjct: 582 YNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSML 641



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 124/265 (46%), Gaps = 3/265 (1%)

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           +Q G  P   T+  L+  L K G +E  +  +  +       N  +YN  I   C+   +
Sbjct: 431 VQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSM 490

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           D+A  +F  + N GI PN VT+N L+   C+ G +  A + L  +L   + +   D+ T 
Sbjct: 491 DRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLL---ESRFRPDIFTF 547

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
             L+D   +      A   + +M + ++  +++ YN+LI  FC  GD+S +     QM  
Sbjct: 548 NSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKL 607

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
            G  PD  ++N L+     + +  +A   +  + + G+ PD  +Y  +I+ LC  G   K
Sbjct: 608 HGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDK 667

Query: 385 AREFLLSMLEKSVVPEPHIWNVIID 409
           ARE  LSM E    P+ +  ++  D
Sbjct: 668 AREIFLSMKENGCTPDSYTCSLFSD 692



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 144/294 (48%), Gaps = 7/294 (2%)

Query: 186 PNCATYNAFITGYCRVNELDKALH--LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P+ +T+N  IT  C + +LD  +   +F     +G++P   T+  L+ AL K G +    
Sbjct: 402 PSSSTFN--ITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGN 459

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +++  ++ D      S++ +  +++D   K     +A  ++ D+  + I  +IV YN LI
Sbjct: 460 RYMDRLINDG---LISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLI 516

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            GFC NG++  A      +L+  F PD+ T+N+L++ LC+  K + A   +  + +  V 
Sbjct: 517 GGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVP 576

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ I+Y  +I   C  GD+ ++   L  M    + P+   +N +I GY        A  +
Sbjct: 577 PNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKL 636

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
            D ML  G+  + +T+ ALI +  + G    A  +   M  +G  PD +T +L 
Sbjct: 637 FDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSLF 690



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 11/174 (6%)

Query: 370 KTIIQGLCIHG--------DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           K +IQG+ +           ++ + + L  + E  +     +  ++   +GR G  +   
Sbjct: 155 KQLIQGVLVRNLHREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCV 214

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   +   G++     +NA++ A  +  S+  A+   ++M      PD FTYN+LI   
Sbjct: 215 EVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGV 274

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
           C LG +  AL+L  +M   G  P++ TYT LI G     N K A E F  +QT+
Sbjct: 275 CRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFF---NAKRAGEAFKVLQTM 325



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 61/292 (20%), Positives = 106/292 (36%), Gaps = 39/292 (13%)

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           F Q+   G  P    YN +++ L K   LD A   +  +S     PD+ +Y  +I G+C 
Sbjct: 217 FGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCR 276

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G + +A   +  M      P    + ++IDG+        AF +   M    V  N  T
Sbjct: 277 LGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEAT 336

Query: 439 FNALILAETRGGSIFDAFSLKKE------------------------------MLL---- 464
             +L+    R  +   AF L  E                              M L    
Sbjct: 337 MRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFLIKTG 396

Query: 465 -DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
            +G  P   T+N+ +        + +   ++D  ++ G+ P   TY  LI+     G M+
Sbjct: 397 KEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKME 456

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQKWLLRN 571
                  ++   GL  +   + ++     + K  D+A    RD+H + +  N
Sbjct: 457 IGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPN 508



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 39/159 (24%)

Query: 114 LETDYRRHV----AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           LE+ +R  +    ++I  LC   K   A     +M++    P+V+T+N L+   C IGD+
Sbjct: 536 LESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDV 595

Query: 170 EKADHVIREMS--EMRP---------------------------------SPNCATYNAF 194
            ++ H++R+M    ++P                                  P+  TY A 
Sbjct: 596 SRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGAL 655

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           I   C+    DKA  +F +M  NG  P+  T ++    L
Sbjct: 656 IKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSLFSDTL 694


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 201/423 (47%), Gaps = 18/423 (4%)

Query: 119 RRHVAVIRDLCLGGKIGTAL----WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + H  V+  LC  GK+  A+     +RR M          T + L+N L K G + +A  
Sbjct: 191 KTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAA-----TFSILINGLVKAGMMIQAHS 245

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           + +E +    + +  TY A +    +  ++ +A+ L   +  NG  P   T+N L++ LC
Sbjct: 246 LAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLC 305

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
           K G L +A+  L +++   D   T DV+T T L+D   K    F+A  L+ +M  + +  
Sbjct: 306 KMGRLEEAIDLLRKIV---DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLAL 362

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D V Y  LI G    G I  A + +  M   G +PDV+T +T+++ L K G++  A   +
Sbjct: 363 DTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF 422

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G+AP+++ Y  +I GLC    +  A E L  M +    P+   +N++IDG  + 
Sbjct: 423 KSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKS 482

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           GD+  A +  D ML  G   +V+T+N LI    + G+   A       +LD +    F Y
Sbjct: 483 GDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACG-----VLDDMSSSRFVY 537

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           + L+   C  G +     L+ EM R G+  +  T T LI   C    + EA  +F  I+ 
Sbjct: 538 SSLVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRK 596

Query: 535 LGL 537
            G+
Sbjct: 597 EGM 599



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 177/376 (47%), Gaps = 5/376 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSE-MRPSPNCATYNAFITGYCRVNELDKALH 209
           PDV T N L+   C   + E+A  VIREM E    +P+  T+N  + G C+  ++  A+ 
Sbjct: 152 PDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMD 211

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
            F  +    +  +  T +IL++ L K G++  A     E   +     T D+ T T +++
Sbjct: 212 HFEAV-RRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNG---CTIDIHTYTAIVN 267

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              KN    +A+AL   +        I  YN L+NG C  G +  A     +++  G  P
Sbjct: 268 WLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 327

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           DV+TY +L++ L K+ +  EA   +  ++  G+A D + Y  +I+GL   G I +A    
Sbjct: 328 DVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVY 387

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
            +M     VP+    + +IDG  + G +  A  I   M + G++ N   ++ALI    + 
Sbjct: 388 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 447

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             +  A  +  +M      PD  TYN+LI   C  G +  A   +DEML  G  PD+ TY
Sbjct: 448 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 507

Query: 510 TELIKGHCARGNMKEA 525
             LI G C  GN   A
Sbjct: 508 NILISGLCKAGNTDAA 523



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 179/396 (45%), Gaps = 5/396 (1%)

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V T N L++   +     +A ++++        P+  T+N  ITGYC   E ++A  +  
Sbjct: 119 VHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIR 178

Query: 213 TMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
            M  + G+ P+  THN+++H LCK G +  A+     V       A     T +IL++  
Sbjct: 179 EMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAA----TFSILINGL 234

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K G   QA +L  +        DI  Y  ++N    N  I  A A   ++   G  P +
Sbjct: 235 VKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTI 294

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            TYN LLN LCK G+L+EA      +   G  PD ++Y ++I GL       +A +    
Sbjct: 295 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKE 354

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M  + +  +   +  +I G  + G +  A S+   M S G   +V T + +I   ++ G 
Sbjct: 355 MASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR 414

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           I  A  + K M   G+ P+   Y+ LI   C    +  AL++  +M +   TPD ITY  
Sbjct: 415 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 474

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           LI G C  G+++ A   F ++   G   D   + IL
Sbjct: 475 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 510



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 198/438 (45%), Gaps = 16/438 (3%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           CT+  D   + A++  L    KI  A+ L  K+   G  P + T+N L+N LCK+G LE+
Sbjct: 255 CTI--DIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 312

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A  ++R++ +   +P+  TY + I G  +     +A  LF  MA+ G+  + V +  L+ 
Sbjct: 313 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIR 372

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            L + G +  A      + +        DV+T + ++D   K G    A+ ++  M  + 
Sbjct: 373 GLLQTGKIPQASSVYKTMTSHG---CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 429

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           +  + V Y+ LI+G C    +  A     QM K    PD ITYN L++ LCK G ++ A 
Sbjct: 430 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 489

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
            F+  + + G  PD  +Y  +I GLC  G+   A   L  M     V     ++ ++DG 
Sbjct: 490 AFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV-----YSSLVDGL 544

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            + G L     +   M   GV +N  T   LI    +   + +A SL   +  +G+ P  
Sbjct: 545 CKSGKLEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHP 602

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
           + YN +I A    G ++    +Y EM  R   PD +TY  L+ G      M  A   + +
Sbjct: 603 YAYNSIISALIKSGKVNEGQAVYQEMT-RWWKPDRVTYNALLNGMIGANRMDRAHYYYLE 661

Query: 532 IQTLGLAIDHIPFRILKK 549
           +   G      P  IL K
Sbjct: 662 MTGRGYV---PPVSILHK 676



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 141/322 (43%), Gaps = 42/322 (13%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+IR L   GKI  A  + + M   G VPDV+T + +++ L K G +  A  + + M 
Sbjct: 367 YTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME 426

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
               +PN   Y+A I G C+  ++D AL + + M      P+ +T+NIL+  LCK G + 
Sbjct: 427 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 486

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A  F  E+L   +     DV T  IL+    K G+   A  + +DM           Y+
Sbjct: 487 AARAFFDEML---EAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYS 538

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGF--------------------------------- 327
            L++G C +G +      F +M + G                                  
Sbjct: 539 SLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG 598

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +P    YN++++ L K GK++E    Y  +++    PD+++Y  ++ G+     + +A  
Sbjct: 599 MPHPYAYNSIISALIKSGKVNEGQAVYQEMTRWW-KPDRVTYNALLNGMIGANRMDRAHY 657

Query: 388 FLLSMLEKSVVPEPHIWNVIID 409
           + L M  +  VP   I + + D
Sbjct: 658 YYLEMTGRGYVPPVSILHKLAD 679



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 11/289 (3%)

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF-CQMLKR-GFLPDVITYNTLLNCLCK 343
           D  ++ I TD V     +  F    D   A+  F C    R GF   V T N LL+   +
Sbjct: 77  DRLRREISTDAV-----VKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFAR 131

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEPH 402
             +  EA +       T   PD  ++  +I G C+  +  +A   +  M E   V P   
Sbjct: 132 TKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLK 191

Query: 403 IWNVIIDGYGRCGDLSNAFS-IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             N+++ G  + G +  A      +  S  VS+   TF+ LI    + G +  A SL +E
Sbjct: 192 THNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAA--TFSILINGLVKAGMMIQAHSLAQE 249

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
              +G   D+ TY  ++        I  A+ L +++   G TP I TY  L+ G C  G 
Sbjct: 250 TTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGR 309

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           ++EA ++  KI   G   D + +  L     + K S +A  + ++   R
Sbjct: 310 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASR 358


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 209/438 (47%), Gaps = 33/438 (7%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           + +++   VP+V+T+  LV+ LCK GDL  A+ +I +M E    PN  TY++ I GY + 
Sbjct: 353 KMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKK 412

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG-------------LLG-------- 240
             L++A+ L   M +  + PN  T+  ++  L K G             L+G        
Sbjct: 413 GMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYIL 472

Query: 241 ----DAVKFLGEV-----LADD--DGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
               + +K +G +     L  D      T D I  T L+D +FK GD+  AL+   +M +
Sbjct: 473 DALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQE 532

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K +  D+V+YNVLI+G    G + + +AY   M ++G  PD+ T+N ++N   KQG  + 
Sbjct: 533 KEMPWDVVSYNVLISGLLKFGKVGADWAY-KGMREKGIEPDIATFNIMMNSQRKQGDFEG 591

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
               +  +   G+ P  +    ++  LC  G + +A + L  M+   + P    + + +D
Sbjct: 592 ILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLD 651

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
              +       F   + +LS+G+  +   +N LI    + G    A  + ++M   G  P
Sbjct: 652 MSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVP 711

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D  T+N L+       H+  AL  Y  M+  GI+P++ TY  +I+G    G +KE E+  
Sbjct: 712 DTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWL 771

Query: 530 AKIQTLGLAIDHIPFRIL 547
           +++++ G+  D   +  L
Sbjct: 772 SEMKSRGMRPDDFTYNAL 789



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 212/441 (48%), Gaps = 11/441 (2%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
            +  D   +  VI  LC  G    A     +M++ G +PD ++ N L++  CK+G+  +A
Sbjct: 156 VISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARA 215

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             ++ E+SE+    N  T+   I+ Y  ++ +++A   +  M  +G  P+ VT + +++ 
Sbjct: 216 KALVDEISEL----NLITHTILISSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINR 268

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LCK G + +    L E+   ++     + +T T L+DS FK  D   ALAL++ M  + I
Sbjct: 269 LCKDGKVMEGGLLLREM---EEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGI 325

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D+V Y VL+ G    GD+  A   F  +L+   +P+V+TY  L++ LCK G L  A  
Sbjct: 326 PVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEF 385

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               + +  V P+ ++Y ++I G    G + +A   +  M +++VVP    +  +IDG  
Sbjct: 386 IITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLF 445

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           + G    A  +   M   GV  N +  +AL+    R G I +   L K+M+  G+  D  
Sbjct: 446 KAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHI 505

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            Y  LI      G    AL   +EM  + +  D+++Y  LI G    G +  A+  +  +
Sbjct: 506 NYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKVG-ADWAYKGM 564

Query: 533 QTLGLAIDHIPFRILKKRYRR 553
           +  G+  D   F I+    R+
Sbjct: 565 REKGIEPDIATFNIMMNSQRK 585



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 191/406 (47%), Gaps = 15/406 (3%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KMI  G  PDV   N L++ LCK+G L  A  ++R       S +  TYN  I+G C   
Sbjct: 119 KMIACGVSPDVFALNVLIHSLCKVGQLSFAISLLRNRV---ISVDTVTYNTVISGLCEHG 175

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
             D+A    S M   GI P+ V+ N L+   CK G    A   + E+       +  ++I
Sbjct: 176 LADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEI-------SELNLI 228

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T TIL+ SY+      +A   + DM       D+V ++ +IN  C +G +        +M
Sbjct: 229 THTILISSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREM 285

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
            + G  P+ +TY TL++ L K      A   Y  +   G+  D + Y  ++ GL   GD+
Sbjct: 286 EEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDL 345

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A +    +LE + VP    +  ++DG  + GDLS+A  I   ML   V  NV T++++
Sbjct: 346 REAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSM 405

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    + G + +A SL ++M    + P+ FTY  +I      G   +A ++  EM   G+
Sbjct: 406 INGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGV 465

Query: 503 TPDIITYTELIKGHCAR-GNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             +      L+  H  R G +KE + +   + + G+ +DHI +  L
Sbjct: 466 EENNYILDALV-NHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSL 510



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 205/427 (48%), Gaps = 4/427 (0%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
           R M+  G  PDV+T + ++N LCK G + +   ++REM EM   PN  TY   +    + 
Sbjct: 248 RDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKA 307

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            +   AL L+S M   GI  + V + +L+  L K G L +A K    +L D++     +V
Sbjct: 308 KDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNE---VPNV 364

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T T L+D   K GD   A  +   M +K++  ++V Y+ +ING+   G +  A +   +
Sbjct: 365 VTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRK 424

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M  +  +P+  TY T+++ L K GK + AS     +   GV  +      ++  L   G 
Sbjct: 425 MEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGR 484

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           I + +  +  M+ K V  +   +  +ID + + GD   A S  + M    +  +V ++N 
Sbjct: 485 IKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNV 544

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI    + G +   ++ K  M   GI PD+ T+N+++ +    G     L+L+D+M   G
Sbjct: 545 LISGLLKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCG 603

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
           I P ++    ++   C +G MKEA ++  ++  + +  +   +RI      + K +D   
Sbjct: 604 IKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIF 663

Query: 562 DIHQKWL 568
             H+  L
Sbjct: 664 KTHETLL 670



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 111/469 (23%), Positives = 197/469 (42%), Gaps = 44/469 (9%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           +L+E +  ++ M D   V      +   +  VI  L   GK   A  + ++M   G   +
Sbjct: 414 MLEEAVSLMRKMEDQNVV-----PNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEEN 468

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
               + LVN L +IG +++   ++++M     + +   Y + I  + +  + + AL    
Sbjct: 469 NYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAE 528

Query: 213 TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF 272
            M    +  + V++N+L+  L K G +G    + G      +     D+ T  I+M+S  
Sbjct: 529 EMQEKEMPWDVVSYNVLISGLLKFGKVGADWAYKGM----REKGIEPDIATFNIMMNSQR 584

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K GD    L LW+ M    I+  ++  N+++   C  G +  A     QM+     P++ 
Sbjct: 585 KQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLT 644

Query: 333 TY-----------------------------------NTLLNCLCKQGKLDEASHFYGVL 357
           TY                                   NTL+  LCK G   +A+     +
Sbjct: 645 TYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDM 704

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
              G  PD +++  ++ G  +   + KA      M+E  + P    +N II G    G +
Sbjct: 705 EARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLI 764

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
                    M S G+  + FT+NALI  + + G+  ++ ++  EM+ DG+ P   TYN+L
Sbjct: 765 KEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVL 824

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           I     +G +  A +L  EM +R ++P+  TY  +I G C      E E
Sbjct: 825 ISEFAKVGKMLQATELMKEMGKRRVSPNTSTYCTMISGLCKLCTHPEVE 873



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 165/365 (45%), Gaps = 35/365 (9%)

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL-GEVLADDDGK 256
           Y     L  A    S M   G+ P+    N L+H     GL+ D V  +  +++A     
Sbjct: 68  YLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKMIA---CG 124

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
            + DV    +L+ S  K G    A++L  +   + I  D V YN +I+G C +G    A+
Sbjct: 125 VSPDVFALNVLIHSLCKVGQLSFAISLLRN---RVISVDTVTYNTVISGLCEHGLADEAY 181

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA-------------------SHFYGV- 356
            +  +M+K G LPD +++NTL++  CK G    A                   S +Y + 
Sbjct: 182 QFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHTILISSYYNLH 241

Query: 357 --------LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
                   +  +G  PD +++ +II  LC  G +++    L  M E  V P    +  ++
Sbjct: 242 AIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLV 301

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           D   +  D  +A ++   M+  G+  ++  +  L+    + G + +A    K +L D   
Sbjct: 302 DSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEV 361

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P+V TY  L+   C  G +  A  +  +ML + + P+++TY+ +I G+  +G ++EA  +
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSL 421

Query: 529 FAKIQ 533
             K++
Sbjct: 422 MRKME 426



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 121/264 (45%), Gaps = 15/264 (5%)

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL-DEASHFYGVLSKTGVAPDQIS 368
           G +  A      M   G +PD+  +N+L++     G + D+ S  Y  +   GV+PD  +
Sbjct: 72  GRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKMIACGVSPDVFA 131

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI-WNVIIDGYGRCGDLSNAFSIRDLM 427
              +I  LC  G +     F +S+L   V+    + +N +I G    G    A+     M
Sbjct: 132 LNVLIHSLCKVGQL----SFAISLLRNRVISVDTVTYNTVISGLCEHGLADEAYQFLSEM 187

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP-DVFTYNLLIGASCNLGH 486
           +  G+  +  +FN LI    + G+   A     + L+D I   ++ T+ +LI +  NL  
Sbjct: 188 VKIGILPDTVSFNTLIDGFCKVGNFARA-----KALVDEISELNLITHTILISSYYNL-- 240

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
            H   + Y +M+  G  PD++T++ +I   C  G + E   +  +++ +G+  +H+ +  
Sbjct: 241 -HAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTT 299

Query: 547 LKKRYRRMKESDKARDIHQKWLLR 570
           L     + K+   A  ++ + ++R
Sbjct: 300 LVDSLFKAKDYRHALALYSQMVVR 323


>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 566

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 188/390 (48%), Gaps = 4/390 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++KG  PDV     L+ +LCK   + KA  V+  M      P+ ++Y   ++  CR   
Sbjct: 88  MVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGN 147

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +  A+ L   M   G   N VT+N LV  LC  G L  +++ L  ++         +  T
Sbjct: 148 VGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKG---LVPNAYT 204

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            + L+++ +K     +A  L +++  K  + ++V+YNVL+ G C  G    A   F ++ 
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELP 264

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            +GF P+V++YN LL  LC +G+ +EA+     ++    +P  ++Y  +I  L +HG   
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTE 324

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A E L  M+     P    +N II    + G L       D M+    + N  T+NA I
Sbjct: 325 HALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNA-I 383

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                 G + +AFS+ + +           Y ++I + C  G+ + A QL  EM + G T
Sbjct: 384 ATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFT 443

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           PD  TY+ LI+G C  G + EA E+F+ ++
Sbjct: 444 PDSFTYSSLIRGLCMEGMLNEAIEIFSVME 473



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 190/417 (45%), Gaps = 5/417 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++  LC  G +G A+ L  KM + G   + +T+N LV  LC  G+L ++  ++
Sbjct: 131 DASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLL 190

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             + +    PN  TY+  +    +    D+A  L   +   G  PN V++N+L+  LCK+
Sbjct: 191 DRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKE 250

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G   DA++   E+ +      + +V++  IL+ S    G   +A  L  +M         
Sbjct: 251 GRTEDAIRLFRELPSKG---FSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPST 307

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V YN+LI    L+G    A     +M++  F P   +YN ++  LCK GKLD        
Sbjct: 308 VTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQ 367

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +      P++ +Y  I   LC  G + +A   + S+  K        + ++I    R G+
Sbjct: 368 MMYRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGN 426

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
              AF +   M  +G + + FT+++LI      G + +A  +   M  +   PD   YN 
Sbjct: 427 TYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNK-PDTENYNS 485

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           LI   C      LAL +++ M+ +G  P+  TYT L++G      M  A +V  ++Q
Sbjct: 486 LILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQ 542



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 114/221 (51%)

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           ++ AF +   M+++G  PDV     LL  LCK  K+ +A     ++  +G+ PD  SY  
Sbjct: 78  LTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTF 137

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++  LC  G++  A + +  M E         +N ++ G    G+L+ +  + D ++  G
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N +T++ L+ A  +     +A  L  E++  G  P++ +YN+L+   C  G    A+
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAI 257

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           +L+ E+  +G +P++++Y  L++  C  G  +EA  + A++
Sbjct: 258 RLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM 298



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 131/286 (45%), Gaps = 5/286 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC  G+   A  L  +M      P  +T+N L+  L   G  E A  V+ EM   R
Sbjct: 278 LLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRAR 337

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P  ++YN  I   C+  +LD  +     M      PN  T+N  +  LC++G++ +A 
Sbjct: 338 FKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAF 396

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             + + L +    +T +     I++ S  + G+ + A  L  +M +     D   Y+ LI
Sbjct: 397 SII-QSLGNKQHSSTQEFYK--IVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLI 453

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C+ G ++ A   F  +++    PD   YN+L+   CK  + D A   + ++   G  
Sbjct: 454 RGLCMEGMLNEAIEIF-SVMEENNKPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYL 512

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           P++ +Y  +++G+    ++  A + L  +  + V+ +  +  +++ 
Sbjct: 513 PNETTYTILVEGIIHEKEMDLATKVLRELQLRDVISQSTLERLVMQ 558



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 101/205 (49%)

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K+ +L +A      + + G  PD      ++  LC    + KA + +  M+   ++P+  
Sbjct: 74  KELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDAS 133

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +  ++    R G++  A  + D M  +G  +N  T+N+L+      G++  +  L   +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRL 193

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           +  G+ P+ +TY+ L+ A+        A +L DE++ +G  P++++Y  L+ G C  G  
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRT 253

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++A  +F ++ + G + + + + IL
Sbjct: 254 EDAIRLFRELPSKGFSPNVVSYNIL 278



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 73/147 (49%)

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L++AF   + M+  G   +VF    L+    +   +  A  + + M+  GI PD  +Y  
Sbjct: 78  LTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTF 137

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L+ + C  G++  A+QL D+M   G   + +TY  L++G C  GN+ ++ ++  ++   G
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDI 563
           L  +   +  L +   + + +D+A  +
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKL 224


>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Brachypodium distachyon]
          Length = 841

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 210/468 (44%), Gaps = 41/468 (8%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS----- 185
            G++  A    R+M  +G VPD  T N L     K G   +  H  +E+ EM  S     
Sbjct: 328 AGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISAD 387

Query: 186 -------------------------------PNCATYNAFITGYCRVNELDKALHLFSTM 214
                                           + A +NA +  Y +    ++AL ++S M
Sbjct: 388 SVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVM 447

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G+ P+  T N L+  LC +G L DA   L  ++       TS     TI MDSYF++
Sbjct: 448 NKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVGTS----FTIYMDSYFRS 503

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G+   AL  W+DM +  +Q D +A++  I+G C    ++ A+  F +M  RGF+P+ ITY
Sbjct: 504 GNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITY 563

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N+L++  C+ G + EA      + ++G+ PD  +   +I G C  G +    +  L M  
Sbjct: 564 NSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYN 623

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             + P+   +N II+ Y    D+S+A    + ML+ G   ++FT+N  + +      +  
Sbjct: 624 SGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLLNR 683

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  +  E++  G  P+  TYN L+   C+   +  A+ L  ++++    P+ +T      
Sbjct: 684 AVKMLDELVAMGCMPNSVTYNTLMDGICS-DVLDRAMILTGKLIKMAFQPNTVTVNVFFS 742

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             C +G  K A     K++   +A D     IL   Y+ M++  +A +
Sbjct: 743 HFCKQGFGKRALVWAEKLKEDSVAFDDATMNILDWAYKEMEDDSQASN 790



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 208/496 (41%), Gaps = 41/496 (8%)

Query: 110 VRCTLETDYRRHVA-VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           +RC   T     +A ++R L   G++  A  +  +M  +G  P +   N ++   C  G 
Sbjct: 166 IRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGL 225

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           +     ++  M      P+  +YN  I GY    +   A  L   M  +G +P  VT+NI
Sbjct: 226 VHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNI 285

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           LV+ LC  G + DA +   E++        ++ IT  +L+D Y K G   +A A   +M 
Sbjct: 286 LVNVLCHDGNMVDARRLFDEMV---KVGIEANTITFNVLVDGYAKAGRMDEAYAACREMK 342

Query: 289 QKNIQTDIVAYNVLING------------------------------------FCLNGDI 312
            + +  D   +N+L  G                                     C +G +
Sbjct: 343 ARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRL 402

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A+   C  +++G    V  +N L+    K+G  ++A   Y V++K G+ P   ++  +
Sbjct: 403 DDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYL 462

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I GLC  G +  A+  L  M+ K        + + +D Y R G++  A    D M+  GV
Sbjct: 463 IMGLCNQGRLDDAQLLLEHMICKGYCVGTS-FTIYMDSYFRSGNVEGALKCWDDMVKVGV 521

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +   F+A I    R   + +A+    EM   G  P+  TYN LI A C +G++  AL+
Sbjct: 522 QPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALK 581

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           L  +M + G+ PD+ T   LI G C  G +    + F  +   GL  D + +  +   Y 
Sbjct: 582 LEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYC 641

Query: 553 RMKESDKARDIHQKWL 568
             ++   A     K L
Sbjct: 642 GAQDMSSAMIFMNKML 657



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 117/236 (49%), Gaps = 4/236 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V+  ++ D+    A I  LC    +  A     +M  +G VP+ +T+N L++  C++G +
Sbjct: 517 VKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYV 576

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A  + ++M +    P+  T N  I G+C+   LD     F  M N+G+ P+ VT+N +
Sbjct: 577 SEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTI 636

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           ++A C    +  A+ F+ ++LAD       D+ T  I M S   N    +A+ + +++  
Sbjct: 637 INAYCGAQDMSSAMIFMNKMLADG---CEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVA 693

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
                + V YN L++G C +  +  A     +++K  F P+ +T N   +  CKQG
Sbjct: 694 MGCMPNSVTYNTLMDGIC-SDVLDRAMILTGKLIKMAFQPNTVTVNVFFSHFCKQG 748



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/362 (22%), Positives = 145/362 (40%), Gaps = 40/362 (11%)

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           + +HA    G+  +A+  L  +     G  T  +     L+   F+ G+   A  ++ +M
Sbjct: 145 LALHAFLAAGMASEALVVLAHIRC---GGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEM 201

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
             +  +  +  +N +I GFC  G +         M +   +PD  +YN L+      G+ 
Sbjct: 202 TARGPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQA 261

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            +A      + ++G  P  ++Y  ++  LC  G++V AR     M++  +      +NV+
Sbjct: 262 GDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVL 321

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI------------------LAETRG 449
           +DGY + G +  A++    M + G+  +  TFN L                   L E  G
Sbjct: 322 VDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFG 381

Query: 450 ------------------GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
                             G + DA+ L    +  G+   V  +N L+ A    G    AL
Sbjct: 382 SRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQAL 441

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           ++Y  M + G+ P   T+  LI G C +G + +A+ +   +   G  +    F I    Y
Sbjct: 442 EVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVG-TSFTIYMDSY 500

Query: 552 RR 553
            R
Sbjct: 501 FR 502



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 92/218 (42%)

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
           A  + ++ F   G  S A      +   G  P +     LL  L + G++  A   +  +
Sbjct: 142 ALRLALHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEM 201

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
           +  G  P    +  +I G C  G +      L  M   +V+P+   +N++I GY   G  
Sbjct: 202 TARGPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQA 261

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
            +AF + D M   G    V T+N L+      G++ DA  L  EM+  GI  +  T+N+L
Sbjct: 262 GDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVL 321

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           +      G +  A     EM  RG+ PD  T+  L  G
Sbjct: 322 VDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAG 359


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 216/504 (42%), Gaps = 73/504 (14%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR+LC  G+   A  + R     G   DV  +N LV   C+ G L+ A  +I   + M 
Sbjct: 80  LIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLI---ASMP 136

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY   I G C    +  AL L   M   G +P+ VT+ +L+ A+CK    G+A+
Sbjct: 137 VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAM 196

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L E+ A      T +++T  ++++   + G    A  + N +     Q DIV+Y  ++
Sbjct: 197 NVLDEMRAKG---CTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVL 253

Query: 304 NG-----------------------------------FCLNGDISSAFAYFCQMLKRGFL 328
            G                                   FC  G +  A     QM + G  
Sbjct: 254 KGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCT 313

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P+    N ++N +CKQG++D+A  F   +   G  PD ISY T+++GLC  G    A+E 
Sbjct: 314 PNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKEL 373

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  M+ K+  P    +N  I    + G +  A  + +LM  +G S  + T+NAL+     
Sbjct: 374 LPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCV 433

Query: 449 GGSIFDAFSLKKEM---------------------------LLDGIFP-----DVFTYNL 476
            G +  A  L   +                           LL G+       +  T+N+
Sbjct: 434 QGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNV 493

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L+   C  G +  A++L ++M+  G TP++IT+  L+ G     N +EA E+   + + G
Sbjct: 494 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 553

Query: 537 LAIDHIPFRILKKRYRRMKESDKA 560
           +++D I +  +     R   +++A
Sbjct: 554 VSLDTITYSSVVDVLSREDRTEEA 577



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 183/383 (47%), Gaps = 6/383 (1%)

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           +G  PDV     L+  LC+ G    A  V+R         +   YN  + GYCR   LD 
Sbjct: 68  RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDA 127

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A  L ++M    + P+  T+  ++  LC +G +GDA+  L ++L          V+T T+
Sbjct: 128 ARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG---CQPSVVTYTV 181

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+++  K+    +A+ + ++M  K    +IV YNV+ING C  G +  A     ++   G
Sbjct: 182 LLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYG 241

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
           F PD+++Y T+L  LC   + D+    +  +      P+++++  +++  C  G + +A 
Sbjct: 242 FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAI 301

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           + L  M +    P   + N++I+   + G + +A+   + M  +G + +  ++  ++   
Sbjct: 302 QVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGL 361

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            R G    A  L  EM+     P+  T+N  I   C  G I  A++L + M   G +  I
Sbjct: 362 CRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGI 421

Query: 507 ITYTELIKGHCARGNMKEAEEVF 529
           +TY  L+ G C +G +  A E+F
Sbjct: 422 VTYNALVHGFCVQGRVDSALELF 444



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 201/443 (45%), Gaps = 14/443 (3%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           KE L+RL +           + D   +  V++ LC   +      L  +M+ K  VP+ +
Sbjct: 231 KEILNRLSSY--------GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 282

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T + LV   C+ G +E+A  V+++MS+   +PN    N  I   C+   +D A    + M
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G  P+ +++  ++  LC+ G    A + L E++  +      + +T    +    + 
Sbjct: 343 GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKN---CPPNEVTFNTFICILCQK 399

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   QA+ L   M +      IV YN L++GFC+ G + SA   F  +      P+ ITY
Sbjct: 400 GLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITY 456

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
            TLL  LC   +LD A+     + +     + +++  ++   C  G + +A E +  M+E
Sbjct: 457 TTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMME 516

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
               P    +N ++DG  +  +   A  +   ++S GVS +  T+++++   +R     +
Sbjct: 517 HGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEE 576

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  +   +   G+ P V  YN ++ A C       A+  +  M+  G  P+  TY  LI+
Sbjct: 577 AIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIE 636

Query: 515 GHCARGNMKEAEEVFAKIQTLGL 537
           G    G +KEA  V +++   G+
Sbjct: 637 GLAHEGLLKEARYVLSELYAKGV 659



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 206/452 (45%), Gaps = 11/452 (2%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E ++ L  MR  G   CT   +   +  +I  +C  G++  A  +  ++   G  PD+++
Sbjct: 194 EAMNVLDEMRAKG---CT--PNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVS 248

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +  ++  LC     +    +  EM + +  PN  T++  +  +CR   +++A+ +   M+
Sbjct: 249 YTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMS 308

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
            +G  PN    NI+++A+CK+G + DA  FL  +          D I+ T ++    + G
Sbjct: 309 QHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM---GMYGCNPDTISYTTVLRGLCRAG 365

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
               A  L  +M +KN   + V +N  I   C  G I  A      M + G    ++TYN
Sbjct: 366 RWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYN 425

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            L++  C QG++D A   +  L      P+ I+Y T++ GLC    +  A E L  M++K
Sbjct: 426 ALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQK 482

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
                   +NV++  + + G +  A  + + M+  G + N+ TFN L+   T+  +  +A
Sbjct: 483 DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEA 542

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
             L   ++  G+  D  TY+ ++           A+Q+   +   G+ P +  Y +++  
Sbjct: 543 LELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFA 602

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            C R    +A + FA + + G   +   + IL
Sbjct: 603 LCKRCETDQAIDFFAYMVSNGCMPNESTYIIL 634



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 148/318 (46%), Gaps = 6/318 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  V+R LC  G+   A  L  +M++K   P+ +T N  +  LC+ G +E+A  +I
Sbjct: 350 DTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLI 409

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M E   S    TYNA + G+C    +D AL LF+ +      PN +T+  L+  LC  
Sbjct: 410 ELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHA 466

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             L  A + L  ++  D      + +T  +L+  + + G   +A+ L N M +     ++
Sbjct: 467 ERLDAAAELLAGMIQKD---CPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 523

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + +N L++G   + +   A      ++ +G   D ITY+++++ L ++ + +EA      
Sbjct: 524 ITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHA 583

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G+ P    Y  I+  LC   +  +A +F   M+    +P    + ++I+G    G 
Sbjct: 584 VQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGL 643

Query: 417 LSNAFSIRDLMLSFGVSS 434
           L  A  +   + + GV S
Sbjct: 644 LKEARYVLSELYAKGVLS 661



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 119/243 (48%), Gaps = 3/243 (1%)

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            RG  PDV     L+  LC++G+  +A+        +G   D  +Y T++ G C +G + 
Sbjct: 67  SRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLD 126

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            AR  + SM    V P+ + +  II G    G + +A ++ D ML  G   +V T+  L+
Sbjct: 127 AARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLL 183

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            A  +     +A ++  EM   G  P++ TYN++I   C  G +  A ++ + +   G  
Sbjct: 184 EAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQ 243

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PDI++YT ++KG CA     + + +FA++       + + F +L + + R    ++A  +
Sbjct: 244 PDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQV 303

Query: 564 HQK 566
            Q+
Sbjct: 304 LQQ 306



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 134/312 (42%), Gaps = 3/312 (0%)

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DV   T L+ +  + G    A  +           D+ AYN L+ G+C  G + +A    
Sbjct: 73  DVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLI 132

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M      PD  TY  ++  LC +G++ +A      + + G  P  ++Y  +++ +C  
Sbjct: 133 ASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKS 189

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
               +A   L  M  K   P    +NVII+G  R G + +A  I + + S+G   ++ ++
Sbjct: 190 SGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSY 249

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
             ++          D   L  EM+     P+  T+++L+   C  G +  A+Q+  +M +
Sbjct: 250 TTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQ 309

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
            G TP+      +I   C +G + +A +    +   G   D I +  + +   R    + 
Sbjct: 310 HGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEH 369

Query: 560 ARDIHQKWLLRN 571
           A+++  + + +N
Sbjct: 370 AKELLPEMVRKN 381



 Score = 38.9 bits (89), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 31/72 (43%)

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A +L +    RG  PD+   T+LI+  C RG   +A  V    +  G  +D   +  L  
Sbjct: 58  AARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVA 117

Query: 550 RYRRMKESDKAR 561
            Y R    D AR
Sbjct: 118 GYCRYGRLDAAR 129


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 218/443 (49%), Gaps = 18/443 (4%)

Query: 124 VIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++ LC   +   A+  + R+M + G +PDV ++N L+  LC     ++A  ++  M++ 
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192

Query: 183 R---PSPNCATYNAFITGYCR--------VNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           R     P+  +YN  + G+ +           +DKA+ + +TM  NG+ P+ +T+N ++H
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 252

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
             C  G   +A+  L ++ +D       +V+T + LM+   KNG   +A  +++ M ++ 
Sbjct: 253 GYCSSGQPKEAIGTLKKMRSDG---VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 309

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
           ++ DI  Y  L+ G C  G +  +   F  M++ G  PD+ITYNTL++  C  GK+DEA+
Sbjct: 310 LEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 369

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                +   GV PD ++Y T+I G C    +  A      M+   V P    +N+I+ G 
Sbjct: 370 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 429

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
                 + A  +   +   G    + T+N ++    +     +A  + + + L  +  + 
Sbjct: 430 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 489

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            T+N++IGA    G +  A  L+      G+ PD+ TY+ + +    +G+++E +++F  
Sbjct: 490 RTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLS 549

Query: 532 IQTLGLAIDHIPFRILKKRYRRM 554
           ++  G + D    R+L    R++
Sbjct: 550 MEENGCSADS---RMLNSIVRKL 569



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 202/423 (47%), Gaps = 9/423 (2%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P V T+  L+   C+ G L+     +  + +     +  T+   + G C       A+ 
Sbjct: 89  TPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMD 148

Query: 210 L-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILM 268
           +    M   G  P+  ++N L+  LC +    +A++ L  +  D  G +  DV++   ++
Sbjct: 149 IVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208

Query: 269 DSYFKNGDKFQ--------ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           + +FK G + +        A+ + N M +  +  D + YN +++G+C +G    A     
Sbjct: 209 NGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLK 268

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +M   G  P+V+TY++L+N LCK G+  EA   +  ++K G+ PD  +Y+T++QG C  G
Sbjct: 269 KMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEG 328

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            ++++ +    M+   V P+   +N +IDG    G +  A  +   M+S GV  ++ T+ 
Sbjct: 329 RVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYG 388

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            LI    R   + DA +L KEM+  G+ P++ TYN+++    +      A +LY  + + 
Sbjct: 389 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS 448

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           G   ++ TY  ++ G C      EA  +F  +    L ++   F I+     +    D+A
Sbjct: 449 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA 508

Query: 561 RDI 563
           +D+
Sbjct: 509 KDL 511



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 194/413 (46%), Gaps = 14/413 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQK---GTVPDVLTHNYLVNELCKIG--------DLEKA 172
           +++ LC   +   AL L   M      G+ PDV+++N ++N   K G         ++KA
Sbjct: 169 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKA 228

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             V+  M +    P+C TYN+ + GYC   +  +A+     M ++G+ PN VT++ L++ 
Sbjct: 229 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 288

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LCK G   +A K    +          D+ T   L+  + K G   ++  L++ M +  +
Sbjct: 289 LCKNGRSTEARKIFDSMTKRG---LEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGV 345

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           + DI+ YN LI+G CL G +  A      M+  G  PD++TY TL+N  C+  ++D+A  
Sbjct: 346 KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 405

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            +  +  +GV+P+ I+Y  I+QGL        A+E  +S+ +     E   +N+I+ G  
Sbjct: 406 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC 465

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +      A  +   +    +     TFN +I A  + G + +A  L      +G+ PDV 
Sbjct: 466 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVR 525

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           TY+L+       G +     L+  M   G + D      +++    RG++  A
Sbjct: 526 TYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 578



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 162/351 (46%), Gaps = 12/351 (3%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           KE +  LK MR  G     +E +   + +++  LC  G+   A  +   M ++G  PD+ 
Sbjct: 261 KEAIGTLKKMRSDG-----VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 315

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  L+   CK G + +++ +   M  +   P+  TYN  I G C   ++D+A  L ++M
Sbjct: 316 TYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 375

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            + G++P+ VT+  L++  C+   + DA+    E+++      + ++IT  I++   F  
Sbjct: 376 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG---VSPNIITYNIILQGLFHT 432

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
                A  L+  + +   Q ++  YN++++G C N     A   F  +       +  T+
Sbjct: 433 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 492

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N ++  L K G++DEA   +   S  G+ PD  +Y  + + L   G + +  +  LSM E
Sbjct: 493 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 552

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNA----FSIRDLMLSFGVSSNVFTFNA 441
                +  + N I+    + GD++ A    F I +   S   S+  F   +
Sbjct: 553 NGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLES 603



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/221 (21%), Positives = 83/221 (37%), Gaps = 47/221 (21%)

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           V P  H + ++I    R G L   F+    ++  G   +  TF  L+          DA 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 457 SLK-KEMLLDGIFPDVFTYNLLIGASCN-------LGHIHL------------------- 489
            +  + M   G  PDVF+YN L+   C+       L  +H+                   
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 490 --------------------ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
                               A+++ + M++ G+ PD +TY  ++ G+C+ G  KEA    
Sbjct: 208 LNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTL 267

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            K+++ G+  + + +  L     +   S +AR I      R
Sbjct: 268 KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 308



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 5/135 (3%)

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG---IFPDVFTYN 475
           +A  + D +L  G  ++++  N   LA+    S   A S    M   G   + P V TY 
Sbjct: 38  DARHVFDELLRRGRGASIYGLNR-ALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE-VFAKIQT 534
           +LIG  C  G + L       ++++G   D IT+T L+KG CA     +A + V  ++  
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 535 LGLAIDHIPFRILKK 549
           LG   D   +  L K
Sbjct: 157 LGCIPDVFSYNNLLK 171


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 224/443 (50%), Gaps = 12/443 (2%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA----DHVIREMSEMRPSPNC 188
           ++  A  +  K+++ G  PD +T N L+  LC  G +++A    DHVIR+    R   + 
Sbjct: 103 QLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRK----RFHLDQ 158

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNG-IRPNRVTHNILVHALCKKGLLGDAVKFLG 247
            +Y   I G C+  E   AL L   +     +RP+ + +  ++ + CK  L+ DA     
Sbjct: 159 VSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYS 218

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E++     K   +V+T   L+  +   G   +A+ L N+M   N+  ++  +N+LI+G C
Sbjct: 219 EMIVK---KIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLC 275

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G++  A +    M+K+G  P+V+TY +L++      ++++A H +  +S  GV P+  
Sbjct: 276 KEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVH 335

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           SY  +I GLC +  + +A +    M  K++ P    ++ +IDG  + G +S+ + + D +
Sbjct: 336 SYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEI 395

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
            + G  +N+ T+N+L+    +   +  A +L  +M  +GI PD+ TY  L+   C  G +
Sbjct: 396 NNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRL 455

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A ++Y ++L +G   +I  YT +I G C  G   EA  + ++++  G   D + +  L
Sbjct: 456 KDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETL 515

Query: 548 KKRYRRMKESDKARDIHQKWLLR 570
                +  ++ KA  + ++ + R
Sbjct: 516 ISALFKNNKNGKAVKLLREMIAR 538



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 205/404 (50%), Gaps = 2/404 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+   ++M  KG  P++ T N L+N    +  L  A  ++ ++ ++   P+  T N  + 
Sbjct: 72  AISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLR 131

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C   ++ +AL+    +       ++V++  L++ LCK G    A++ L ++  +    
Sbjct: 132 GLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLL 189

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              DVI  T ++DS+ K+     A  L+++M  K I  ++V +N LI GFC+ G +  A 
Sbjct: 190 VRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAV 249

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M      P+V T+N L++ LCK+G++ +A+    V+ K GV P+ ++Y +++ G 
Sbjct: 250 GLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGY 309

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
            +  ++ KA+    ++  + V P  H ++V+I+G  +   +  A  +   M    ++ N 
Sbjct: 310 FLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNT 369

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+++LI    + G I D + L  E+   G   ++ TYN L+   C    +  A+ L  +
Sbjct: 370 VTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTK 429

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           M   GI PD+ TYT L+ G C  G +K+A+ ++  +   G  ++
Sbjct: 430 MKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLN 473



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 196/394 (49%), Gaps = 8/394 (2%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTV---PDVLTHNYLVNELCKI 166
           +R     D   +  +I  LC  G+   AL L RK+  +G +   PDV+ +  +++  CK 
Sbjct: 150 IRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKD 207

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
             +  A  +  EM   +  PN  T+N+ I G+C V +L +A+ L + M+ N + PN  T 
Sbjct: 208 KLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTF 267

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           NIL+  LCK+G +  A   L  ++         +V+T T LMD YF   +  +A  ++N 
Sbjct: 268 NILIDGLCKEGEVKKATSVLSVMIKQG---VEPNVVTYTSLMDGYFLVKEVNKAKHVFNT 324

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           +  + +  ++ +Y+V+ING C N  +  A   F +M  +   P+ +TY++L++ LCK G+
Sbjct: 325 ISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGR 384

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           + +       ++  G   + I+Y +++ GLC +  + KA   L  M ++ + P+   +  
Sbjct: 385 ISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTT 444

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           ++DG  + G L +A  I   +L  G   N+  +  +I    + G   +A SL  +M  +G
Sbjct: 445 LVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNG 504

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
             PD  TY  LI A         A++L  EM+ R
Sbjct: 505 CMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 183/387 (47%), Gaps = 24/387 (6%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           +P    +N  ++   ++N    A+     M   GI+P   T NIL++       L  A  
Sbjct: 50  TPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFS 109

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            + ++L         D +T   L+     NG   +AL   + + +K    D V+Y  LIN
Sbjct: 110 MVAKILKLG---YQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLIN 166

Query: 305 GFCLNGDISSAFAYFCQMLKR--GFL---PDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           G C +G+  +A     Q+L++  G L   PDVI Y  +++  CK   + +A   Y  +  
Sbjct: 167 GLCKSGETRAAL----QLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIV 222

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
             + P+ +++ ++I G CI G + +A   L  M   +V P  + +N++IDG  + G++  
Sbjct: 223 KKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKK 282

Query: 420 AFSIRDLMLSFGVSSNVFTFNA------LILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
           A S+  +M+  GV  NV T+ +      L+    +   +F+  SL+      G+ P+V +
Sbjct: 283 ATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLR------GVTPNVHS 336

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y+++I   C    +  A++L+ EM  + +TP+ +TY+ LI G C  G + +  ++  +I 
Sbjct: 337 YSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEIN 396

Query: 534 TLGLAIDHIPFRILKKRYRRMKESDKA 560
             G   + I +  L     +  + DKA
Sbjct: 397 NRGQPANIITYNSLLNGLCKNHQVDKA 423



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 172/335 (51%), Gaps = 5/335 (1%)

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           L DAV     +L  ++   T  +     ++ S  K      A++    M  K IQ ++  
Sbjct: 33  LDDAVSSFNHILHMNN--HTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFT 90

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           +N+LIN F     ++ AF+   ++LK G+ PD +T NTLL  LC  GK+ EA +F+  + 
Sbjct: 91  FNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVI 150

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGD 416
           +     DQ+SY T+I GLC  G+   A + LL  +E  ++  P +  +  IID + +   
Sbjct: 151 RKRFHLDQVSYGTLINGLCKSGETRAALQ-LLRKIEGLLLVRPDVIMYTAIIDSFCKDKL 209

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           + +A+ +   M+   +  NV TFN+LI      G + +A  L  EM L+ + P+V+T+N+
Sbjct: 210 VIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNI 269

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           LI   C  G +  A  +   M+++G+ P+++TYT L+ G+     + +A+ VF  I   G
Sbjct: 270 LIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRG 329

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           +  +   + ++     + K  D+A  + ++  L+N
Sbjct: 330 VTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKN 364



 Score = 46.2 bits (108), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 13/152 (8%)

Query: 71  WFSNKDSDNEGNPQAV--FNAL--DLILKENLDR----LKTMRDTGPVRCTLETDYRRHV 122
           W    + +N G P  +  +N+L   L     +D+    L  M+D G     ++ D   + 
Sbjct: 389 WDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEG-----IQPDMSTYT 443

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC  G++  A  + + ++ KG   ++  +  ++N LCK G  ++A  ++ +M + 
Sbjct: 444 TLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDN 503

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
              P+  TY   I+   + N+  KA+ L   M
Sbjct: 504 GCMPDAVTYETLISALFKNNKNGKAVKLLREM 535


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 204/440 (46%), Gaps = 15/440 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ LC  GKI  A     +M ++  VPDV T+N +++ LCK   + +A     E  E  
Sbjct: 16  LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI----EFFETM 71

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P P+  TYN  + G C+   + +A  LF +M   GI P+ VT+  L+   CK      A 
Sbjct: 72  PEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAY 131

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L +++A    K +  V +   +++   KN    QA  L+ +M     + D V YN LI
Sbjct: 132 GLL-QLMASR--KCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLI 188

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C+   +  A      M++  F PD IT+  L+  LC   ++ EA   +  ++K G A
Sbjct: 189 HGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCA 248

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI-WNVIIDGYGRCGDLSNAFS 422
           PD +++  ++  LCI     K R  L  +      PE  I +  I    GR      A  
Sbjct: 249 PDLVTHTVLVSKLCIRR---KLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAAR 305

Query: 423 IRDLMLSFGVSSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           +   M   GV+ NV T+ A    L + + G    A+   + ML  GI PD+  YN+L+  
Sbjct: 306 LLQKMARRGVAPNVVTYTAFFKGLGDWKEG--MRAYREFRRMLEQGIEPDMVAYNVLVDG 363

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C    + +A ++   M + G+ P+I+TY  L+  HC +G ++   E+   + + G   D
Sbjct: 364 FCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPD 423

Query: 541 HIPFRILKKRYRRMKESDKA 560
              +  L     R+ + D A
Sbjct: 424 VATWSTLVAGLFRVGQVDAA 443



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 186/390 (47%), Gaps = 11/390 (2%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   +  ++  LC  G++  A  L   M   G  P  +T+  L++  CK+   E A  
Sbjct: 73  EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYG 132

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +++ M+  + SP   +Y + I G C+  ++D+A  LF  M   G +P+RVT+N L+H LC
Sbjct: 133 LLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLC 192

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
            K  L +A K L  V+ ++  +   D IT T L++         +A  L+  M ++    
Sbjct: 193 VKQRLHEA-KDLLTVMVENSFQ--PDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAP 249

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF--LPD-VITYNTLLNCLCKQGKLDEAS 351
           D+V + VL++  C+   +  A +     + R +   P+ VI Y  +   L ++   D A+
Sbjct: 250 DLVTHTVLVSKLCIRRKLRPALS-----VVRNYPACPEAVILYTPIFRELGRRRGFDRAA 304

Query: 352 HFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                +++ GVAP+ ++Y    +GL    + ++A      MLE+ + P+   +NV++DG+
Sbjct: 305 RLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGF 364

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            +   L  A  +   M   G+  N+ T+N L+    R G +     L   M+  G  PDV
Sbjct: 365 CKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDV 424

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
            T++ L+     +G +  A    +  + +G
Sbjct: 425 ATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 171/398 (42%), Gaps = 46/398 (11%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           PN  +Y   +   CR  ++DKA    + MA   + P+  T+N+++  LCK   +  A++F
Sbjct: 8   PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 67

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             E + +       DV+T   L+    KNG   QA +L+  M    I    V Y  LI+ 
Sbjct: 68  F-ETMPE------PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDV 120

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           FC      +A+     M  R   P V +Y +++N LCK  K+D+A   +  +   G  PD
Sbjct: 121 FCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPD 180

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
           +++Y T+I GLC+   + +A++ L  M+E S  P+   +  +I+G      +  AF +  
Sbjct: 181 RVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQ 240

Query: 426 LMLSFGVSSNVFTFNALI-----------------------------------LAETRGG 450
            M   G + ++ T   L+                                   L   RG 
Sbjct: 241 GMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRG- 299

Query: 451 SIFD-AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             FD A  L ++M   G+ P+V TY        +      A + +  ML +GI PD++ Y
Sbjct: 300 --FDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAY 357

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             L+ G C    +  AE++   +   GL  + + +  L
Sbjct: 358 NVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTL 395



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 4/261 (1%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           +F ++ + + ++Y  L+   C  G I  A +   +M +   +PDV TYN +++ LCK  +
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           +  A  F+  + +    PD ++Y T++ GLC +G + +A     SM    + P    +  
Sbjct: 61  ISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +ID + +      A+ +  LM S   S  V+++ ++I    +   +  A+ L +EM L G
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             PD  TYN LI   C    +H A  L   M+     PD IT+T LI+G C    +KEA 
Sbjct: 177 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF 236

Query: 527 EVFAKIQTLGLAIDHIPFRIL 547
            +F  +   G A D +   +L
Sbjct: 237 VLFQGMAKQGCAPDLVTHTVL 257



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 157/364 (43%), Gaps = 46/364 (12%)

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
           +PN +++  LV ALC+ G +  A   + E+  +   K   DV T  +++D+  K     +
Sbjct: 7   KPNALSYCYLVKALCRTGKIDKACSTIAEMARE---KLVPDVFTYNVVIDTLCKARRISR 63

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A+    + F+   + D+V YN L+ G C NG ++ A + F  M   G  P  +TY TL++
Sbjct: 64  AI----EFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLID 119

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
             CK  + + A     +++    +P   SY +II GLC +  + +A +    M      P
Sbjct: 120 VFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKP 179

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   +N +I G      L  A  +  +M+      +  TF ALI        I +AF L 
Sbjct: 180 DRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLF 239

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL---------------------------- 491
           + M   G  PD+ T+ +L+   C    +  AL                            
Sbjct: 240 QGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRG 299

Query: 492 -----QLYDEMLRRGITPDIITYTELIKGHCARGNMKE---AEEVFAKIQTLGLAIDHIP 543
                +L  +M RRG+ P+++TYT   KG    G+ KE   A   F ++   G+  D + 
Sbjct: 300 FDRAARLLQKMARRGVAPNVVTYTAFFKGL---GDWKEGMRAYREFRRMLEQGIEPDMVA 356

Query: 544 FRIL 547
           + +L
Sbjct: 357 YNVL 360



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 115/274 (41%), Gaps = 14/274 (5%)

Query: 92  LILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVP 151
           L +K+ L   K +  T  V  + + D     A+I  LC   +I  A  L + M ++G  P
Sbjct: 191 LCVKQRLHEAKDLL-TVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAP 249

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT----YNAFITGYCRVNELDKA 207
           D++TH  LV++LC    L  A  V+R        P C      Y        R    D+A
Sbjct: 250 DLVTHTVLVSKLCIRRKLRPALSVVRNY------PACPEAVILYTPIFRELGRRRGFDRA 303

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   MA  G+ PN VT+      L   G   + ++   E     +     D++   +L
Sbjct: 304 ARLLQKMARRGVAPNVVTYTAFFKGL---GDWKEGMRAYREFRRMLEQGIEPDMVAYNVL 360

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D + K      A  +   M Q  +  +IV YN L+   C  G + +       M+ RG 
Sbjct: 361 VDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGR 420

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
            PDV T++TL+  L + G++D A  F  +    G
Sbjct: 421 QPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 4/131 (3%)

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           N  ++  L+ A  R G I  A S   EM  + + PDVFTYN++I   C    I  A++ +
Sbjct: 9   NALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFF 68

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           + M      PD++TY  L+ G C  G + +A  +F  ++  G+    + +  L   + +M
Sbjct: 69  ETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKM 124

Query: 555 KESDKARDIHQ 565
            + + A  + Q
Sbjct: 125 CQFETAYGLLQ 135


>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Brachypodium distachyon]
          Length = 795

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 227/450 (50%), Gaps = 5/450 (1%)

Query: 121 HVAVIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM 179
           H  +I  LC   K+G AL +L+     +   P  ++ N L++ LC  G ++ A   +  M
Sbjct: 205 HSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMSALCNWGFIQPAKSFLCLM 264

Query: 180 SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
            +   +P+  TY+  I G C++  LD+A+ LF  +   G++   VT+N L++     GL 
Sbjct: 265 LKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLT 324

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            +  K +  +          D++T TIL+  + ++GD  + + + ND+  + +Q +IV Y
Sbjct: 325 REVPKIIQFMRYQG---IEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTY 381

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS- 358
           +VL+N     G +  A     ++   G   D+I Y+ L++  CK G+++ A     V+  
Sbjct: 382 SVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCC 441

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
              V P  +++ +I+ GLC  G +V+AR +L ++  K    +  ++NV+IDGY + GD+S
Sbjct: 442 SQKVVPTSLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDIS 501

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           NA  + D ++  G+   + T N+++    + G +  A S  + + +  + P + TY  L+
Sbjct: 502 NAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLM 561

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            A    G ++  L +  EM+ +GI P+ ITY+ +IKG C      +A      +   G+ 
Sbjct: 562 DALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVN 621

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            D + +  L + +  +++   A  IH + +
Sbjct: 622 ADPVTYNTLIQGFCEVQDIQMAFHIHDRMV 651



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 216/444 (48%), Gaps = 4/444 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D   +  +I   C  G +   + +R  ++ +G   +++T++ L+N L K G + +A+
Sbjct: 339 IEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKKGLVHEAE 398

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA-NNGIRPNRVTHNILVHA 232
           +++ E+  +    +   Y+  I GYC++ E+++AL +   M  +  + P  + H  ++  
Sbjct: 399 NLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQKVVPTSLNHLSILVG 458

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LCKKGLL +A  +L  V          DV+   +++D Y K GD   A+ L++ +    +
Sbjct: 459 LCKKGLLVEARWYLENVAVK---YQPGDVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGM 515

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
              IV  N ++ G+C  GD+ +A +YF  +     LP ++TY TL++ L + GK++    
Sbjct: 516 FPTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLS 575

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               + + G+ P+ I+Y  +I+GLC       A  FL +M  + V  +P  +N +I G+ 
Sbjct: 576 ILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVNADPVTYNTLIQGFC 635

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
              D+  AF I D M+  G+     T+N LI      G +  A  L + +   GI    F
Sbjct: 636 EVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQAEYLLESLRERGIELRKF 695

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            Y  LI A C  G  + A+ L+ ++L  G    +  ++  I   C R   KEA      +
Sbjct: 696 AYTTLIKAECAKGMPYEAISLFGKLLDDGFETTVKDFSAAINRLCKRKFAKEAVMFIPFM 755

Query: 533 QTLGLAIDHIPFRILKKRYRRMKE 556
            + G+  D   + +L +  ++ KE
Sbjct: 756 LSAGVFPDTQVYYVLVRALQKRKE 779



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 212/455 (46%), Gaps = 39/455 (8%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I  LC  G +  A+ L  ++ ++G   + +T+N L+N    +G   +  
Sbjct: 269 LNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLTREVP 328

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +I+ M      P+  TY   I G+C   ++++ + + + + + G++ N VT+++L++AL
Sbjct: 329 KIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNAL 388

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM--FQKN 291
            KKGL+ +A   LGE+          D+I  +IL+  Y K G+  +AL + + M   QK 
Sbjct: 389 FKKGLVHEAENLLGEI---HSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQKV 445

Query: 292 IQT----------------------------------DIVAYNVLINGFCLNGDISSAFA 317
           + T                                  D+V YNV+I+G+   GDIS+A  
Sbjct: 446 VPTSLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNAVG 505

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
            + Q++  G  P ++T N++L   CK G L  A  ++  +  + + P  ++Y T++  L 
Sbjct: 506 LYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDALS 565

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G +      L  M+EK + P    ++V+I G  +     +A    D M   GV+++  
Sbjct: 566 EAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVNADPV 625

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
           T+N LI        I  AF +   M+  GI P   TYN LI   C  G +  A  L + +
Sbjct: 626 TYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQAEYLLESL 685

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
             RGI      YT LIK  CA+G   EA  +F K+
Sbjct: 686 RERGIELRKFAYTTLIKAECAKGMPYEAISLFGKL 720



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 188/388 (48%), Gaps = 45/388 (11%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P  +  + L N   +   +  A +V+ +M+ +    + +TY++ + G   +   D AL L
Sbjct: 133 PSSIMWDALANSYARAQMIHDALYVLSKMNSLNMQISVSTYDSLLYG---LRMTDMALEL 189

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           F  M   GI  +  +H+I++  LCK+  +G+A+ FL E                      
Sbjct: 190 FEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEA--------------------- 228

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             + G++F+ L +              ++NVL++  C  G I  A ++ C MLK G  PD
Sbjct: 229 --RKGERFKPLGM--------------SFNVLMSALCNWGFIQPAKSFLCLMLKYGLNPD 272

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
             TY+TL++ LCK G LDEA   +  +++ G+  + ++Y ++I G  + G   +  + + 
Sbjct: 273 RYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLTREVPKIIQ 332

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M  + + P+   + ++I G+   GD+     IR+ +L  G+  N+ T++ L+ A  + G
Sbjct: 333 FMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKKG 392

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM-LRRGITPDIITY 509
            + +A +L  E+   G+  D+  Y++LI   C LG I  AL++ D M   + + P  + +
Sbjct: 393 LVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQKVVPTSLNH 452

Query: 510 TELIKGHCARGNMKEA----EEVFAKIQ 533
             ++ G C +G + EA    E V  K Q
Sbjct: 453 LSILVGLCKKGLLVEARWYLENVAVKYQ 480



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 3/232 (1%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK+ T L +  +M++KG  P+ +T++ ++  LCK      A H +  M     + +  T
Sbjct: 567 AGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVNADPVT 626

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I G+C V ++  A H+   M   GI P  VT+N L++ LC KG +  A ++L E L
Sbjct: 627 YNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQA-EYLLESL 685

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
            +   +        T L+ +    G  ++A++L+  +     +T +  ++  IN  C   
Sbjct: 686 RERGIELRK--FAYTTLIKAECAKGMPYEAISLFGKLLDDGFETTVKDFSAAINRLCKRK 743

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
               A  +   ML  G  PD   Y  L+  L K+ +L      + +  KTG+
Sbjct: 744 FAKEAVMFIPFMLSAGVFPDTQVYYVLVRALQKRKELFYLPLLHALAVKTGI 795


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 218/470 (46%), Gaps = 27/470 (5%)

Query: 96  ENLDRLKTM-RDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           E L+  + M +D  P       D   + A++  LC  GK   A  + R+M+ +G  PD +
Sbjct: 110 EALEHFRAMAKDCAP-------DVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTV 162

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC-RVNELDKALHLFST 213
           T + L++ LCK G  E+A  V+ ++ +     + A +   I   C + N ++ A  +   
Sbjct: 163 TFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGV 222

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           +   G  P  +  N++++  CK   L  A K L EV+ +       +V T TIL+    K
Sbjct: 223 VIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLL-EVMIEKG--CVPNVFTFTILITGLCK 279

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                +A  L   M       ++V Y+ +ING C  G +  A+  F  M +R   P+V+T
Sbjct: 280 ANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVT 339

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           +N L++ LCK  +++EA   Y  + +TG APD I+Y ++I GLC    + +A +   ++ 
Sbjct: 340 HNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIP 399

Query: 394 EKSVVPEPHI-WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           E  V     + ++ +  GY   G +++A  I  +++  G S ++ T+ +LIL   +    
Sbjct: 400 ESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRA 459

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +   L +EM   G  P V T + ++G      H   A+QL+D M  RG T D + Y  +
Sbjct: 460 VEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLV 519

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
           ++G        +A  V  +              ++ KR R+   S  A D
Sbjct: 520 VEGMARASKHDKALAVLEQ--------------VIDKRDRKFNPSSSAVD 555



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 221/468 (47%), Gaps = 11/468 (2%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+ M+ +G      E +   H  +++ LC  G++  AL   R M  K   PDV+T+  LV
Sbjct: 80  LEEMKSSG-----FEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALV 133

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           + LCK G  ++A  ++REM     +P+  T++  I G C+    ++A  +   +   G+ 
Sbjct: 134 HALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMG 193

Query: 221 PNRVTHNILVHALCKK-GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            +      ++  LC K   +  A K LG V+A      T  V+   ++++ + K  D   
Sbjct: 194 NSDAAFETIIQRLCNKYNSVELASKVLGVVIAKG---FTPTVLMFNLVINGFCKAKDLDS 250

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A  L   M +K    ++  + +LI G C    +  A     +M+  G  P+V+TY+T++N
Sbjct: 251 AYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVIN 310

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LCKQG++D+A   + ++ +    P+ +++  +I GLC    I +AR+    M E    P
Sbjct: 311 GLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAP 370

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS-SNVFTFNALILAETRGGSIFDAFSL 458
           +   +N +IDG  +   +  AF +   +   GVS +N  T++ L       G + DA  +
Sbjct: 371 DIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRI 430

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
              ++  G  PD+ TY  LI   C        ++L +EM  +G  P + T + ++ G   
Sbjct: 431 FSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFE 490

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             + + A ++F  +   G   D + + ++ +   R  + DKA  + ++
Sbjct: 491 GNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQ 538



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 180/388 (46%), Gaps = 5/388 (1%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           +V + N  ++ LC++   ++A  + R        PN  TY   I G+    +LD A+ L 
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M ++G   N V H  L+  LC  G + +A++    +  D       DV+T T L+ + 
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD----CAPDVMTYTALVHAL 136

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            K G   +A  +  +M  +    D V ++ LI+G C  G    AF     +++RG     
Sbjct: 137 CKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSD 196

Query: 332 ITYNTLLNCLC-KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
             + T++  LC K   ++ AS   GV+   G  P  + +  +I G C   D+  A + L 
Sbjct: 197 AAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLE 256

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M+EK  VP    + ++I G  +   +  A  + + M+  G S NV T++ +I    + G
Sbjct: 257 VMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQG 316

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + DA+ L + M      P+V T+N+LI   C    I  A QLY  M   G  PDIITY 
Sbjct: 317 QVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYN 376

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            LI G C    + EA ++F  I   G++
Sbjct: 377 SLIDGLCKSFQVDEAFQLFQTIPESGVS 404



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 192/426 (45%), Gaps = 6/426 (1%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC   +   AL L R  + +  +P+  T+  L+      GDL+ A  ++ EM       N
Sbjct: 32  LCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGN 91

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
              +   + G C    + +AL  F  MA +   P+ +T+  LVHALCK G   +A   L 
Sbjct: 92  AVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLR 150

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E++A        D +T + L+D   K G + QA  +  D+ Q+ +     A+  +I   C
Sbjct: 151 EMVAQG---CAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLC 207

Query: 308 LN-GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
                +  A      ++ +GF P V+ +N ++N  CK   LD A     V+ + G  P+ 
Sbjct: 208 NKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNV 267

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
            ++  +I GLC    + +A++ L  M+     P    ++ +I+G  + G + +A+ +  L
Sbjct: 268 FTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQL 327

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           M       NV T N LI    +   I +A  L   M   G  PD+ TYN LI   C    
Sbjct: 328 MERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQ 387

Query: 487 IHLALQLYDEMLRRGIT-PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           +  A QL+  +   G++  + +TY+ L  G+ A G M +A  +F+ +   G + D   + 
Sbjct: 388 VDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYT 447

Query: 546 ILKKRY 551
            L   Y
Sbjct: 448 SLILEY 453



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 201/449 (44%), Gaps = 11/449 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI   C    + +A  L   MI+KG VP+V T   L+  LCK   + +A  ++ +M    
Sbjct: 238 VINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGG 297

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SPN  TY+  I G C+  ++D A  LF  M      PN VTHNIL+  LCK   + +A 
Sbjct: 298 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 357

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT-DIVAYNVL 302
           +    +    +     D+IT   L+D   K+    +A  L+  + +  +   + V Y+ L
Sbjct: 358 QLYHRM---RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTL 414

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            +G+   G ++ A   F  ++ +GF PD+ TY +L+   CK  +  E       ++  G 
Sbjct: 415 FHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGF 474

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P   +   ++ GL       +A +   SM  +    +  I+N++++G  R      A +
Sbjct: 475 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALA 534

Query: 423 IRDLML-----SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
           + + ++      F  SS+    +AL+ +  + G   DA  L  +M   G    V +YN L
Sbjct: 535 VLEQVIDKRDRKFNPSSS--AVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRL 592

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           +     L     A Q+++ M+  G  P+I T   +I   C+   + +A E+  ++  LG 
Sbjct: 593 LSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGC 652

Query: 538 AIDHIPFRILKKRYRRMKESDKARDIHQK 566
             D      L   Y +   +D AR + ++
Sbjct: 653 CPDIETCNTLIGGYCKSGRADLARKLLEE 681



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 187/417 (44%), Gaps = 5/417 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   ++G A  L  KM+  G  P+V+T++ ++N LCK G ++ A  + + M    
Sbjct: 273 LITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 332

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T+N  I G C+   +++A  L+  M   G  P+ +T+N L+  LCK   + +A 
Sbjct: 333 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 392

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +    +   + G + ++ +T + L   Y   G    A  +++ +  K    D+  Y  LI
Sbjct: 393 QLFQTI--PESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 450

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
             +C             +M  +GF P V T + +L  L +    + A   +  ++  G  
Sbjct: 451 LEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCT 510

Query: 364 PDQISYKTIIQGLC---IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            D + Y  +++G+     H   +   E ++   ++   P     + +++   + G   +A
Sbjct: 511 DDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDA 570

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +   M   G ++ V ++N L+   +R     +A  + + M+  G  P++ T N++I  
Sbjct: 571 KQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISW 630

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            C+   +  A +L   M + G  PDI T   LI G+C  G    A ++  ++   GL
Sbjct: 631 LCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGL 687



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 168/395 (42%), Gaps = 53/395 (13%)

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R   N  + N  +   CR+N   +AL LF         PN+ T+ IL+      G L  A
Sbjct: 17  RVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIA 76

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++                                      L  +M     + + V +  L
Sbjct: 77  IQ--------------------------------------LLEEMKSSGFEGNAVVHTTL 98

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + G C  G +  A  +F  M K    PDV+TY  L++ LCK GK DEA      +   G 
Sbjct: 99  MKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGC 157

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY-GRCGDLSNAF 421
           APD +++ T+I GLC  G   +A   L  ++++ +      +  II     +   +  A 
Sbjct: 158 APDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELAS 217

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +  ++++ G +  V  FN +I    +   +  A+ L + M+  G  P+VFT+ +LI   
Sbjct: 218 KVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGL 277

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C    +  A QL ++M+  G +P+++TY+ +I G C +G + +A E+F  ++      + 
Sbjct: 278 CKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNV 337

Query: 542 IPFRIL-------------KKRYRRMKESDKARDI 563
           +   IL             ++ Y RM+E+  A DI
Sbjct: 338 VTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDI 372



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 170/396 (42%), Gaps = 42/396 (10%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  VI  LC  G++  A  L + M ++   P+V+THN L++ LCK   +E+A  +   M 
Sbjct: 305 YSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMR 364

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP-NRVTHNILVHALCKKGLL 239
           E   +P+  TYN+ I G C+  ++D+A  LF T+  +G+   N VT++ L H     G +
Sbjct: 365 ETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRM 424

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN------------------------- 274
            DA +    ++   D   + D+ T T L+  Y K                          
Sbjct: 425 ADACRIFSMLV---DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 481

Query: 275 ----GDKFQ------ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
               G  F+      A+ L++ M  +    D + YN+++ G         A A   Q++ 
Sbjct: 482 SAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVID 541

Query: 325 ---RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
              R F P     + L+  LC+ GK D+A      +S+ G A    SY  ++ GL     
Sbjct: 542 KRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQR 601

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
             +A +   +M+     PE    NV+I        + +A+ +   M   G   ++ T N 
Sbjct: 602 WDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNT 661

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
           LI    + G    A  L +EM   G+ P+  T++LL
Sbjct: 662 LIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 148/316 (46%), Gaps = 8/316 (2%)

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +V +    +D   +   + +ALAL+ +   +    +   Y +LI GF   GD+  A    
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M   GF  + + + TL+  LC  G++ EA   +  ++K   APD ++Y  ++  LC  
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALCKA 139

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G   +A+  L  M+ +   P+   ++ +IDG  + G    AF + + ++  G+ ++   F
Sbjct: 140 GKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAF 199

Query: 440 NALILAETRGGSIFDAFSLKKEML----LDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
             +I    R  + +++  L  ++L      G  P V  +NL+I   C    +  A +L +
Sbjct: 200 ETII---QRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLE 256

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMK 555
            M+ +G  P++ T+T LI G C    + EA+++  K+   G + + + +  +     +  
Sbjct: 257 VMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQG 316

Query: 556 ESDKARDIHQKWLLRN 571
           + D A ++ Q    RN
Sbjct: 317 QVDDAYELFQLMERRN 332


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 189/389 (48%), Gaps = 3/389 (0%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
           V DV +   ++   C+ G++EK+  ++ E+ E   SPN   Y   I G C+  E++KA  
Sbjct: 160 VLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           LF  M   G+  N  T+ +L+H L K G+     +   ++    +     ++ T   +M+
Sbjct: 220 LFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM---QEHGVFPNLHTYNCVMN 276

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K+G    A  ++++M ++ +  +IV YN LI G C     + A     QM   G  P
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINP 336

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           ++ITYNTL++  C   KL +A      L   G++P  ++Y  ++ G C  GD   A + +
Sbjct: 337 NLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVV 396

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M E+ + P    + ++ID + R  ++  A  +R  M   G++ +V T++ LI      
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIK 456

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + +A  L K M+     P+   YN ++   C  G  + AL+L+ EM  + + P++ +Y
Sbjct: 457 GRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASY 516

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLA 538
             +I+  C     KEAE +  K+   G+ 
Sbjct: 517 RYMIEVLCKERKSKEAEGLVEKMIDSGIG 545



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 182/383 (47%), Gaps = 5/383 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI+  C  G+I  +  L  ++ + G  P+V+ +  L++  CK G++EKA  +  EM +  
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  TY   I G  +     +   ++  M  +G+ PN  T+N +++ LCK G   DA 
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAF 288

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K   E+    +   + +++T   L+    +     +A  + + M    I  +++ YN LI
Sbjct: 289 KVFDEM---RERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLI 345

Query: 304 NGFCLNGDISSAFAYFCQMLK-RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +GFC    +  A +  C+ LK RG  P ++TYN L++  CK+G    A      + + G+
Sbjct: 346 DGFCGVRKLGKALS-LCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGI 404

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P +++Y  +I       ++ KA +   SM E  + P+ H ++V+I G+   G ++ A  
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASR 464

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M+      N   +N ++L   + GS + A  L +EM    + P+V +Y  +I   C
Sbjct: 465 LFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLC 524

Query: 483 NLGHIHLALQLYDEMLRRGITPD 505
                  A  L ++M+  GI P 
Sbjct: 525 KERKSKEAEGLVEKMIDSGIGPS 547



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 159/357 (44%), Gaps = 38/357 (10%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  L   G       +  KM + G  P++ T+N ++N+LCK G  + A  V  EM 
Sbjct: 236 YTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMR 295

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   S N  TYN  I G CR  + ++A  +   M ++GI PN +T+N L+   C      
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFC------ 349

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
             V+ LG                               +AL+L  D+  + +   +V YN
Sbjct: 350 -GVRKLG-------------------------------KALSLCRDLKSRGLSPSLVTYN 377

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +L++GFC  GD S A     +M +RG  P  +TY  L++   +   +++A      + + 
Sbjct: 378 ILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEEL 437

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ PD  +Y  +I G CI G + +A     SM+EK   P   I+N ++ GY + G    A
Sbjct: 438 GLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRA 497

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
             +   M    +  NV ++  +I    +     +A  L ++M+  GI P     NL+
Sbjct: 498 LRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 5/145 (3%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLET-----DYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           IL +   R   M     +R ++E      D   +  +I   C+ G++  A  L + M++K
Sbjct: 413 ILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEK 472

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
              P+ + +N +V   CK G   +A  + REM E    PN A+Y   I   C+  +  +A
Sbjct: 473 KFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEA 532

Query: 208 LHLFSTMANNGIRPNRVTHNILVHA 232
             L   M ++GI P+    N++  A
Sbjct: 533 EGLVEKMIDSGIGPSDSILNLISRA 557


>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Glycine max]
          Length = 589

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 195/409 (47%), Gaps = 3/409 (0%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D +T+N ++  LC  G L  A  +I  M+     P+  +    I G+ R   +D+A    
Sbjct: 129 DEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTL 188

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
           + M  +G  P+ +T+N+++  LCK G L  A+  + ++        + D IT   ++   
Sbjct: 189 NKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSG---CSPDAITYNSIIRCL 245

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
           F  G+  QA+  W D  +K     ++ Y VLI   C     + A      M   G  PD+
Sbjct: 246 FDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDI 305

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TYN+L+N   KQGK ++ +     L   G+ P+ ++Y T+I  L  HG   +  + L  
Sbjct: 306 VTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKI 365

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           M E S  P    +N++++G  + G L  A S    M++   S ++ T+N L+    + G 
Sbjct: 366 MNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGF 425

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           I +   L   ++     P + TYN++I     LG +  A +LYDEM+ +GI PD IT++ 
Sbjct: 426 IDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSS 485

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           L  G C    ++EA E+  ++      I +  +R +     R K+ D A
Sbjct: 486 LTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIA 534



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 201/429 (46%), Gaps = 16/429 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR     G +  A     KM+  G VPD +T+N ++  LCK G L  A  ++ +MS   
Sbjct: 171 LIRGFIRKGLVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSG 230

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP+  TYN+ I         ++A++ +      G  P  +T+ +L+  +CK      A+
Sbjct: 231 CSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARAL 290

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ--ALALWNDMFQKNIQTDIVAYNV 301
           + L ++  +       D++T   L++   K G K++  AL + N +    +Q + V YN 
Sbjct: 291 EVLEDMAMEG---CYPDIVTYNSLVNLTSKQG-KYEDTALVILN-LLSHGMQPNAVTYNT 345

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LI+    +G           M +    P  +TYN LLN LCK G LD A  FY  +    
Sbjct: 346 LIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTEN 405

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
            +PD I+Y T++ GLC  G I +  + L  ++  S  P    +N++IDG  R G + +A 
Sbjct: 406 CSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAK 465

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            + D M+  G+  +  T ++L     R   + +A  L KEM +         Y  +I   
Sbjct: 466 ELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGL 525

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C    + +A+Q+ D M++    PD   Y+ LIK     G +KEA ++    QTL      
Sbjct: 526 CRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDLH---QTL------ 576

Query: 542 IPFRILKKR 550
           I ++ILKK 
Sbjct: 577 IKWKILKKE 585



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 178/370 (48%), Gaps = 8/370 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L+  LD ++ M  +G   C+   D   + ++IR L   G    A+   R  ++KG  P +
Sbjct: 216 LRSALDLVEDMSLSG---CS--PDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYL 270

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+  L+  +CK     +A  V+ +M+     P+  TYN+ +    +  + +    +   
Sbjct: 271 ITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILN 330

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           + ++G++PN VT+N L+H+L   G   D V  + +++ +     T   +T  IL++   K
Sbjct: 331 LLSHGMQPNAVTYNTLIHSLINHGYW-DEVDDILKIMNETSSPPTH--VTYNILLNGLCK 387

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           +G   +A++ ++ M  +N   DI+ YN L++G C  G I         ++     P ++T
Sbjct: 388 SGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVT 447

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN +++ L + G ++ A   Y  +   G+ PD+I++ ++  G C    + +A E L  M 
Sbjct: 448 YNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMS 507

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
            K    +   +  +I G  R   +  A  + DLM+    + +   ++ALI A   GG + 
Sbjct: 508 MKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLK 567

Query: 454 DAFSLKKEML 463
           +A  L + ++
Sbjct: 568 EANDLHQTLI 577



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 143/320 (44%), Gaps = 3/320 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  +C       AL +   M  +G  PD++T+N LVN   K G  E    VI  + 
Sbjct: 273 YTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLL 332

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  TYN  I         D+   +   M      P  VT+NIL++ LCK GLL 
Sbjct: 333 SHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLD 392

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A+ F   ++ ++    + D+IT   L+    K G   + + L N +   +    +V YN
Sbjct: 393 RAISFYSTMVTEN---CSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYN 449

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           ++I+G    G + SA   + +M+ +G +PD IT+++L    C+  +L+EA+     +S  
Sbjct: 450 IVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMK 509

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
                  +Y+ +I GLC    +  A + L  M++    P+  I++ +I      G L  A
Sbjct: 510 EQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEA 569

Query: 421 FSIRDLMLSFGVSSNVFTFN 440
             +   ++ + +       N
Sbjct: 570 NDLHQTLIKWKILKKEIMLN 589



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 142/343 (41%), Gaps = 35/343 (10%)

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           +D +T+  ++      G    A  L + M +K+      +   LI GF   G +  A   
Sbjct: 128 NDEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKT 187

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             +M+  G +PD ITYN ++  LCK G+L  A      +S +G +PD I+Y +II+ L  
Sbjct: 188 LNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFD 247

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G+  +A  F    L K   P    + V+I+   +    + A  + + M   G   ++ T
Sbjct: 248 KGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVT 307

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDV--------------------------- 471
           +N+L+   ++ G   D   +   +L  G+ P+                            
Sbjct: 308 YNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMN 367

Query: 472 --------FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
                    TYN+L+   C  G +  A+  Y  M+    +PDIITY  L+ G C  G + 
Sbjct: 368 ETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFID 427

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           E  ++   +     +   + + I+     R+   + A++++ +
Sbjct: 428 EGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDE 470



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 85/186 (45%)

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           V  D+++   I+Q LC  G +  A   +  M  KS +P       +I G+ R G +  A 
Sbjct: 126 VQNDEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEAC 185

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
              + M+  G   +  T+N +I    + G +  A  L ++M L G  PD  TYN +I   
Sbjct: 186 KTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCL 245

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
            + G+ + A+  + + LR+G  P +ITYT LI+  C       A EV   +   G   D 
Sbjct: 246 FDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDI 305

Query: 542 IPFRIL 547
           + +  L
Sbjct: 306 VTYNSL 311


>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
 gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
          Length = 567

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 188/387 (48%), Gaps = 6/387 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           +++KG  PDV     L+ +LCK   ++KA  V+    E    P+ A+Y   +   C+   
Sbjct: 88  IVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYTFLVNNLCKRGN 147

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +  A+ L   M  NG   N VT+N LV  LCK G L  +++ L +++         +  T
Sbjct: 148 IGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKG---LVPNEFT 204

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            + L+++ +K     +A+ L + +  K  + ++V+YNVL+ G C  G    A  +F  + 
Sbjct: 205 HSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLP 264

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            +GF P+V++ N +L  LC +G+ +EA+     +     +P  ++Y  +I  L  HG I 
Sbjct: 265 SKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQ 324

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL- 442
            A + L  M+  S  P    +N II    + G         D M+    + N  TFNA+ 
Sbjct: 325 HAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQMIHHCCNPNDGTFNAIA 384

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +L E  GG +  AFS+ + +           Y  +I + C  G+ + A QL  EM++ G 
Sbjct: 385 VLCE--GGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYEMIQSGF 442

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVF 529
            PD  TY+ LI+G C  G + EA E+F
Sbjct: 443 VPDPYTYSSLIRGLCVEGMLDEALEIF 469



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 212/467 (45%), Gaps = 16/467 (3%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           VR   + D  +   ++ DLC   K+  A  +    I+ G +PD  ++ +LVN LCK G++
Sbjct: 89  VRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYTFLVNNLCKRGNI 148

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
             A  ++ +M E     N  TYN+ + G C+   L+++L L   +   G+ PN  TH+ L
Sbjct: 149 GYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSFL 208

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           + A  K+  + +A+K L  ++A   GK   ++++  +L+    K G   +A+  + D+  
Sbjct: 209 LEAAYKERGVDEAMKLLDGIIA-KGGKP--NLVSYNVLLTGLCKEGRTEEAIQFFRDLPS 265

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           K    ++V+ N+++   C  G    A     +M      P ++TYN L+  L   G++  
Sbjct: 266 KGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQH 325

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN---V 406
           A      + +    P   ++  II  LC  G      + L  M+     P    +N   V
Sbjct: 326 AFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQMIHHCCNPNDGTFNAIAV 385

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT---FNALILAETRGGSIFDAFSLKKEML 463
           + +G    G +  AFSI   + S G   N  T   +  +I +  R G+ + AF L  EM+
Sbjct: 386 LCEG----GRVQRAFSI---IQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYEMI 438

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
             G  PD +TY+ LI   C  G +  AL+++  +      P +  +  LI G C  G   
Sbjct: 439 QSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALILGFCKSGRTD 498

Query: 524 EAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            + E+F  +   G   +   + IL +     +E + A ++ ++  +R
Sbjct: 499 LSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKELYIR 545



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 119/236 (50%)

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           ++ AF +   ++++G  PDV     LL  LCK  K+ +A+    +  ++G+ PD  SY  
Sbjct: 78  LNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYTF 137

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++  LC  G+I  A + +  M E         +N ++ G  + G+L+ +  + D ++  G
Sbjct: 138 LVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKG 197

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N FT + L+ A  +   + +A  L   ++  G  P++ +YN+L+   C  G    A+
Sbjct: 198 LVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 257

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           Q + ++  +G  P++++   +++  C  G  +EA E+ A++ +   +   + + IL
Sbjct: 258 QFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNIL 313



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 4/275 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC  G+   A  L  +M  +   P ++T+N L+  L   G ++ A  V+ EM    
Sbjct: 278 ILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRAS 337

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+ AT+N  I+  C+  + D  +     M ++   PN  T N +   LC+ G +  A 
Sbjct: 338 FQPSAATFNPIISHLCKEGKADLVVKCLDQMIHHCCNPNDGTFNAIA-VLCEGGRVQRAF 396

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             + + L +    +T D     I   S  + G+ + A  L  +M Q     D   Y+ LI
Sbjct: 397 SII-QSLGNKQNSSTHDFYRGVI--SSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLI 453

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C+ G +  A   F  + +  + P +  +N L+   CK G+ D +   + ++   G  
Sbjct: 454 RGLCVEGMLDEALEIFRLLEENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMILKGYT 513

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           P++ +Y  +++G+    +   A E L  +  + V+
Sbjct: 514 PNETTYTILVEGIAHEEEKELAAEVLKELYIRQVM 548



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/192 (21%), Positives = 95/192 (49%)

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           +L++A      + + G  PD      ++  LC    + KA   +   +E  ++P+   + 
Sbjct: 77  RLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYT 136

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            +++   + G++  A  + + M   G  +N  T+N+L+    + G++  +  L  +++  
Sbjct: 137 FLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRK 196

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G+ P+ FT++ L+ A+     +  A++L D ++ +G  P++++Y  L+ G C  G  +EA
Sbjct: 197 GLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 256

Query: 526 EEVFAKIQTLGL 537
            + F  + + G 
Sbjct: 257 IQFFRDLPSKGF 268



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 6/171 (3%)

Query: 396 SVVPEPHIWNVIIDGYGRCGD------LSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
           ++ P+  +W +     GR         L++AF   + ++  G   +V     L+    + 
Sbjct: 51  TISPKDSVWTLSNWKVGRKDTRNRDIRLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKS 110

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             +  A  + +  +  GI PD  +Y  L+   C  G+I  A+QL ++M   G   + +TY
Sbjct: 111 NKMKKATRVMEMTIESGIIPDAASYTFLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTY 170

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
             L++G C  GN+ ++ ++  K+   GL  +      L +   + +  D+A
Sbjct: 171 NSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSFLLEAAYKERGVDEA 221


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 193/395 (48%), Gaps = 8/395 (2%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  AL++ R++    T+P +   N +++ L K      A  +  EM      P+  TY
Sbjct: 133 GLLDEALYVFRRL---RTLPALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTY 189

Query: 192 NAFITGYCRVN-ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           N  I   CR    + KA  ++  M    I PN VT+  ++ ALC++G +GDA +      
Sbjct: 190 NTLINA-CRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFD--- 245

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
           A  +     +  T  +LM  + +  D   A+ L+ ++ +  +  + V +  LI+GFC   
Sbjct: 246 AMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAK 305

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
             S A   F +M + G  P V  YN+L++   + G   EA   Y  +++ G+ PD+ +  
Sbjct: 306 RFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCS 365

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +++GLC  G +  A  FL  + E  V      +N +ID Y R G+L  A +    M   
Sbjct: 366 IVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEV 425

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+  NV ++++LI   ++ G +  A ++  EM+  GI P+V TY  LI      G I  A
Sbjct: 426 GIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAA 485

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            +L+ EM+  GI+P+ IT + L+ G C    ++EA
Sbjct: 486 FRLHKEMIENGISPNAITVSVLVDGLCRENRVQEA 520



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 208/467 (44%), Gaps = 55/467 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AV+  L    + G A  L  +M+++G VP V+T+N L+N     G + KA  V  +M   
Sbjct: 156 AVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQ 215

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           +  PN  TY   I   C    +  A  LF  M   G++PN+ T+N+L+   C++  +  A
Sbjct: 216 QIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSA 275

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V    E+L    G   + VI +T L+D + K     +A  ++ +M +  +   +  YN L
Sbjct: 276 VVLYQELL--KSGLNPNAVIFTT-LIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSL 332

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G   +G+   A A + +M + G  PD  T + ++  LC  G++  A  F   + + GV
Sbjct: 333 MDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGV 392

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             +  +Y  +I   C  G++ +A      M E  + P    ++ +IDG+ + G +  A +
Sbjct: 393 NLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMA 452

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I   M++ G+  NV T+ ALI    + G I  AF L KEM+ +GI P+  T ++L+   C
Sbjct: 453 IYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLC 512

Query: 483 NLGHIHLAL--------------------------------------------------- 491
               +  A+                                                   
Sbjct: 513 RENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEA 572

Query: 492 -QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            +L+  M + G+ PD  TYT LI+G C  G +  A  ++A +  +G+
Sbjct: 573 GKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGV 619



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 181/410 (44%), Gaps = 41/410 (10%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           LV  L ++G L++A +V R +  +   P C   NA + G  +      A  LF  M   G
Sbjct: 125 LVIALSQMGLLDEALYVFRRLRTLPALPAC---NAVLDGLVKARRPGCAWELFDEMLRRG 181

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           + P+ VT+N L+          +A +F G V                             
Sbjct: 182 LVPSVVTYNTLI----------NACRFQGTVA---------------------------- 203

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A  +W+ M  + I  ++V Y  +I   C  G I  A   F  M + G  P+  TYN L+
Sbjct: 204 KAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLM 263

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           +  C++  ++ A   Y  L K+G+ P+ + + T+I G C      +A+   L M    V 
Sbjct: 264 SGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVA 323

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P   ++N ++DG  R G+   A ++   M   G+  + FT + ++     GG +  A   
Sbjct: 324 PTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRF 383

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            + +  DG+  +   YN LI   C +G++  AL     M   GI P++++Y+ LI GH  
Sbjct: 384 LQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSK 443

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           RG M+ A  ++ ++   G+  + + +  L   + +    D A  +H++ +
Sbjct: 444 RGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMI 493



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 186/424 (43%), Gaps = 66/424 (15%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  G IG A  L   M + G  P+  T+N L++  C+  D+  A  + +E+ 
Sbjct: 224 YTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELL 283

Query: 181 EMRPSPNCATYNAFITGYCRVNEL-----------------------------------D 205
           +   +PN   +   I G+C+                                        
Sbjct: 284 KSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQ 343

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           +AL L+  M   G+ P+  T +I+V  LC  G +  A +FL  V   +DG    +     
Sbjct: 344 EALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGV--QEDG-VNLNAAAYN 400

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            L+D Y + G+  +ALA    M +  I+ ++V+Y+ LI+G    G +  A A + +M+ +
Sbjct: 401 ALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAK 460

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  P+V+TY  L++   K G +D A   +  + + G++P+ I+   ++ GLC    + +A
Sbjct: 461 GIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEA 520

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
             F+   +E S +              +C D+ + FS      +F +       N++I  
Sbjct: 521 VRFV---MEYSGL--------------KCSDIHSVFS------NFTIEEECLIPNSVIYM 557

Query: 446 ETRGGSIFD-----AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
               G   D     A  L   M   G+ PD FTY LLI   C LG++  A+ LY +M++ 
Sbjct: 558 TLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKI 617

Query: 501 GITP 504
           G+ P
Sbjct: 618 GVKP 621



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 17/154 (11%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E +   + A+I      G I  A  L ++MI+ G  P+ +T + LV+ LC+   +++A 
Sbjct: 462 IEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAV 521

Query: 174 HVIREMSEMRPS-----------------PNCATYNAFITGYCRVNELDKALHLFSTMAN 216
             + E S ++ S                 PN   Y   I G     +  +A  LFS M  
Sbjct: 522 RFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRK 581

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           +G+ P+  T+ +L+   C  G + +A+    +++
Sbjct: 582 SGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMM 615


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 216/457 (47%), Gaps = 38/457 (8%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           K+ + G  P V+T++  ++ LCK+G++E A  +IR +       N  ++N  I G+C+  
Sbjct: 346 KIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRG 405

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           E+ +AL +   M ++GI P+  +++IL++A C KG   D +K L  +   +  +    ++
Sbjct: 406 EVFEALQVLEEMKSSGILPDVYSYSILINAFCGKG---DVMKCLDLMEEMEHSQIKPSIV 462

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF------ 316
           + T L+    K      A+ +++ +   + + D   Y  LI+GFC+ GD+ SA       
Sbjct: 463 SYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEM 522

Query: 317 --------AYFCQ---------------------MLKRGFLPDVITYNTLLNCLCKQGKL 347
                   A+ C+                     ML+ G  PD I  N +L+  C+ G  
Sbjct: 523 ICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYF 582

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            EA        + G   +  SY  II  LC  G   +A E L  ML+++V+P    ++ +
Sbjct: 583 KEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTL 642

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I G+ +  +   A ++   M+  G++ N+ T+  L+   +    + +A+ + KEM   G+
Sbjct: 643 ISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGL 702

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
             D  +Y  LI   CN   +  A  L++EM R G +P++ITYT +I G C    +  A  
Sbjct: 703 CLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATW 762

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
           VF K+    +  D + + +L   Y +    D+A  ++
Sbjct: 763 VFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLY 799



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 203/433 (46%), Gaps = 3/433 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI   C  G++  AL +  +M   G +PDV +++ L+N  C  GD+ K   ++ EM   +
Sbjct: 397 VIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQ 456

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  +Y + I G C+ N L  A+ +F ++  +  + +   +  L+   C +G +  A+
Sbjct: 457 IKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAI 516

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L E++ ++         +   L+  Y+K G   QAL ++N M +  I  D +A N ++
Sbjct: 517 KLLEEMICNE---LVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYIL 573

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G    A        + GF  +  +YN ++  LCK+G  + A      + K  V 
Sbjct: 574 DGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVL 633

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P  ++Y T+I G     +  +A      M++  +      + +++  +     +  A+ I
Sbjct: 634 PSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGI 693

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M   G+  +  ++  LI+       +  A++L +EM  +G  P+V TY  +I   C 
Sbjct: 694 FKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCK 753

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
              I LA  ++D+M R  + PD++TYT LI  +   G   +A +++  ++  G+  D I 
Sbjct: 754 SNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDIT 813

Query: 544 FRILKKRYRRMKE 556
             +L  +   ++E
Sbjct: 814 HNVLGLKAGTVQE 826



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 196/426 (46%), Gaps = 13/426 (3%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  PD+ T N+L+  L +   +E    V  E+ +  PSPN  TY   +  YC     D  
Sbjct: 277 GLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAG 336

Query: 208 LH----LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADD---DGKATSD 260
           +     +   +  +G +P  VT++  +H LCK G +  A+  +  +   +   +  + +D
Sbjct: 337 MRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFND 396

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           VI        + K G+ F+AL +  +M    I  D+ +Y++LIN FC  GD+        
Sbjct: 397 VIYG------FCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLME 450

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +M      P +++Y +L++ LCK+  L  A   +  +  +    D   Y+T+I G C+ G
Sbjct: 451 EMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQG 510

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
           D+  A + L  M+   +VP       +I GY + G    A  + + ML  G+  +    N
Sbjct: 511 DMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACN 570

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            ++    R G   +A +L ++    G   +  +YN +I   C  G+   AL+L   ML+R
Sbjct: 571 YILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKR 630

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            + P ++ Y+ LI G   + N K A  +F ++  +G+  +   + IL   +    +  +A
Sbjct: 631 NVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEA 690

Query: 561 RDIHQK 566
             I ++
Sbjct: 691 YGIFKE 696



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 174/391 (44%), Gaps = 15/391 (3%)

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
             ++  I+ +   + L+ AL +FS   + G+ P+  T N L+  L +     + V+F+  
Sbjct: 248 VVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVE----ANRVEFVRR 303

Query: 249 VLAD-DDGKATSDVITSTILMDSYFKN----GDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           V  +  D   + ++ T TI+M+ Y  +        QA  +   +++   +  +V Y+  I
Sbjct: 304 VFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYI 363

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G++ +A      +       +  ++N ++   CK+G++ EA      +  +G+ 
Sbjct: 364 HGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGIL 423

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  SY  +I   C  GD++K  + +  M    + P    +  +I G  +   L NA   
Sbjct: 424 PDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAV-- 481

Query: 424 RDLMLSFGVSSNVF---TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
            D+  S G SS  +    +  LI      G +  A  L +EM+ + + P  F+   LI  
Sbjct: 482 -DIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRG 540

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
              LG    AL++++ MLR GI PD I    ++ G C  G  KEA  +    Q  G  ++
Sbjct: 541 YYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLN 600

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
              +  +  +  +    ++A ++  + L RN
Sbjct: 601 PHSYNAIIYKLCKEGYPERALELLPRMLKRN 631



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 153/368 (41%), Gaps = 33/368 (8%)

Query: 228 ILVHALCKKG-------LLGDAVKFLGEVLAD---------------DDGKATSDVITST 265
           I+VHA    G       LL D V F  E   D               +      DV+ S 
Sbjct: 197 IIVHAFALAGMRLEVWALLRDIVGFCNEAKYDTFELFSAFLDSPQHVERSGVVFDVLISV 256

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
              +S  +N     AL ++++     ++ DI   N L+        +      F ++  R
Sbjct: 257 FASNSMLEN-----ALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDR 311

Query: 326 GFLPDVITYNTLLNCLCKQGKLD----EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           G  P++ TY  ++N  C     D    +A+   G + ++G  P  ++Y T I GLC  G+
Sbjct: 312 GPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGN 371

Query: 382 IVKAREFLLSMLEKSVVP-EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            V+A   L+  L  +  P   H +N +I G+ + G++  A  + + M S G+  +V++++
Sbjct: 372 -VEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYS 430

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
            LI A    G +     L +EM    I P + +Y  LI   C    +  A+ ++  +   
Sbjct: 431 ILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGAS 490

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
               D   Y  LI G C +G+M  A ++  ++    L       R L + Y ++   D+A
Sbjct: 491 SCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQA 550

Query: 561 RDIHQKWL 568
            ++    L
Sbjct: 551 LEVFNAML 558



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 5/136 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           + E     K M++ G     L  D   +  +I   C   ++  A  L  +M ++G  P+V
Sbjct: 687 MHEAYGIFKEMKERG-----LCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNV 741

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+  +++  CK   ++ A  V  +M+     P+  TY   I  Y +    D+A  L+  
Sbjct: 742 ITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDV 801

Query: 214 MANNGIRPNRVTHNIL 229
           M + G+ P+ +THN+L
Sbjct: 802 MKDKGVLPDDITHNVL 817


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 220/473 (46%), Gaps = 39/473 (8%)

Query: 135 GTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAF 194
            TA+ L +     G  PDV T   ++N LC +        V+  M ++   P   T+   
Sbjct: 24  ATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATL 83

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           I G C    +  A     ++ + G   N  TH  +++ LCK G    A+ +L ++   + 
Sbjct: 84  INGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNR 143

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           G     +I  + +MDS  K+G    AL  ++ M  K IQ D+VAYN LI+G C  G  + 
Sbjct: 144 G--FDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNE 201

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           A      M+++G +P+V T+N L++  CK+GK+  A      +   GV PD ++Y ++I 
Sbjct: 202 ATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVIS 261

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C+   +  A +    M+ K ++P    ++ +I G+ +  +++ A  + D M++ G++ 
Sbjct: 262 GHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNL 321

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEM--------------LLDGIFP----------- 469
           +V T++ LI    + G    A  L   M              +LDG+F            
Sbjct: 322 DVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLF 381

Query: 470 ----------DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
                     ++ TYN+++   C+ G  + A +L+  +  +GI  D++ YT +IKG C  
Sbjct: 382 RKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKE 441

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           G + +AE++  K++  G   +   + +L +    ++  D +R      L++ K
Sbjct: 442 GLLDDAEDLLMKMEENGCPPNEFTYNVLVRGL--LQRYDISRSTKYLMLMKGK 492



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 205/456 (44%), Gaps = 4/456 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E        +I  LC  G +G A      +   G   +  TH  ++N LCK+GD   A 
Sbjct: 73  VEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAI 132

Query: 174 HVIREM-SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             + ++    R       Y+  +   C+   L  AL+ FS M   GI+P+ V +N L+H 
Sbjct: 133 SYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHG 192

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LC  G   +A   LG ++         +V T  +L+D++ K G   +A  +   M    +
Sbjct: 193 LCSFGRWNEATTLLGNMMRKG---IMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGV 249

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           + D+V YN +I+G CL   ++ A   F  M+ +G LP+V+TY++L++  CK   +++A  
Sbjct: 250 EPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIF 309

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               +   G+  D +++ T+I G C  G    A E   +M E   +P      +I+DG  
Sbjct: 310 VLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLF 369

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +C   S A S+   M    +  N+ T+N ++      G   DA  L   +   GI  DV 
Sbjct: 370 KCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVV 429

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            Y  +I   C  G +  A  L  +M   G  P+  TY  L++G   R ++  + +    +
Sbjct: 430 AYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLM 489

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +  GL+ D     +L   +   KE+   +   QK++
Sbjct: 490 KGKGLSADATTTELLISYFSANKENSALQVFLQKFV 525



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 177/356 (49%), Gaps = 10/356 (2%)

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC--KKGLL 239
           M P P    +        ++     A+ L     + G++P+  T  I+++ LC  K  + 
Sbjct: 1   MNPLPPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVF 60

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
           G +V  LG +           V+T   L++     G+   A    + +     +++   +
Sbjct: 61  GFSV--LGAMFKIG---VEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTH 115

Query: 300 NVLINGFCLNGDISSAFAYFCQM--LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
             +ING C  GD + A +Y  ++    RGF   +I Y+T+++ LCK G L  A +F+  +
Sbjct: 116 GTIINGLCKVGDTAGAISYLEKIEGRNRGF-DLLIAYSTIMDSLCKDGMLCLALNFFSGM 174

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
           +  G+ PD ++Y ++I GLC  G   +A   L +M+ K ++P    +NV++D + + G +
Sbjct: 175 TCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKI 234

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL 477
           S A +I   M+  GV  +V T+N++I        + DA  + + M+  G+ P+V TY+ L
Sbjct: 235 SRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSL 294

Query: 478 IGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           I   C   +I+ A+ + DEM+  G+  D++T++ LI G C  G  + A E+F  + 
Sbjct: 295 IHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMH 350



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 142/302 (47%), Gaps = 38/302 (12%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   +E D   + +VI   CL  ++  A+ +   MI KG +P+V+T++ L++  CK  ++
Sbjct: 245 VHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNI 304

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            KA  V+ EM     + +  T++  I G+C+    + A+ LF TM  +   PN       
Sbjct: 305 NKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPN------- 357

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
                                          + T  I++D  FK     +A++L+  M +
Sbjct: 358 -------------------------------LQTCAIILDGLFKCQFHSEAISLFRKMEK 386

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
            N++ +IV YN++++G C  G  + A   F  +  +G   DV+ Y T++  LCK+G LD+
Sbjct: 387 MNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDD 446

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A      + + G  P++ +Y  +++GL    DI ++ ++L+ M  K +  +     ++I 
Sbjct: 447 AEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELLIS 506

Query: 410 GY 411
            +
Sbjct: 507 YF 508


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 212/454 (46%), Gaps = 12/454 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L E +D  + M ++G     +  +   +   I  LCL G+      + + +I      DV
Sbjct: 235 LAEAIDVFRDMEESG-----VTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDV 289

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
             +  ++   C    L++A+ ++REM +   +P+   Y A I+GYC V  L KAL L   
Sbjct: 290 FAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDE 349

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M + G++ N V  + ++  L + G+  +      E           D     ++MD+  K
Sbjct: 350 MVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEF---KKMGIFFDEACYNVVMDALCK 406

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +A+ L  +M  K +  DI+ Y  +I+G+ L G +  A   + +M   G  PD++T
Sbjct: 407 LGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVT 466

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN L     + G   EA      +   GV PD +++  II+GLCI G +  A+ F  ++ 
Sbjct: 467 YNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLE 526

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           EK +      ++ +++GY     ++ AF++   +   G      +F  L+      G   
Sbjct: 527 EKCL----ENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSE 582

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A  L + M+   I P +  Y+ +IGA    G +  A  +++ ++ RG+ PD+ITYT +I
Sbjct: 583 KALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMI 642

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G+C    MKEA  V   ++  G+  D I + +L
Sbjct: 643 NGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVL 676



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 195/424 (45%), Gaps = 53/424 (12%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            V+  LC  GK+  A+ L  +M  K  VPD++ +  +++     G +  A ++ REM ++
Sbjct: 399 VVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDI 458

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN    G+ R     +AL L + M   G++P+ VTHN+++  LC  G + DA
Sbjct: 459 GHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDA 518

Query: 243 VKFL----------------GEVLADDDGKATSDVITST-----ILMDSYFK-------N 274
             F                 G   A+   KA + +I  +     +   S+FK        
Sbjct: 519 QAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSE 578

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           GD  +AL L   M   NI   ++ Y+ +I      G++  A   F  ++ RG  PDVITY
Sbjct: 579 GDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITY 638

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
             ++N  C+  K+ EA H  G +   G+ PD I+Y T++   C   D+  +   L +M  
Sbjct: 639 TIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITY-TVLLNNCSKIDLRSSSSSLDAMKS 697

Query: 395 KSVVPEPH-IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           K  + +P  +W+ + D                      +  +V  +  LI    +  +I 
Sbjct: 698 KENMMDPSALWSEMKD--------------------MDIKPDVICYTVLIDKHCKTNNIQ 737

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           DA +L  EM+  G+ PD  TY  L+   CN+G+I  A+ L+DEML +GI PD  T + L 
Sbjct: 738 DAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL- 796

Query: 514 KGHC 517
             HC
Sbjct: 797 --HC 798



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 191/402 (47%), Gaps = 15/402 (3%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P +L+ N+L+N L +   ++ A  + R++     +PN  TY   I G+CR   L +A
Sbjct: 179 GFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEA 238

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           + +F  M  +G+ PN  ++   +  LC  G      K L +V+   + K   DV   T++
Sbjct: 239 IDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVI---NAKIPMDVFAYTVV 295

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +  +       +A ++  +M ++    D+  Y  LI+G+C+ G++  A A   +M+ +G 
Sbjct: 296 IRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGV 355

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             + +  +++L  L + G   E ++ +    K G+  D+  Y  ++  LC  G + +A E
Sbjct: 356 KTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVE 415

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            L+ M  K +VP+   +  +I GY   G + +A +I   M   G   ++ T+N L    +
Sbjct: 416 LLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFS 475

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           R G   +A SL   M   G+ PD  T+N++I   C  G +  A   +D +  + +     
Sbjct: 476 RNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLE---- 531

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
            Y+ ++ G+C   ++ +A  +  ++   G        RILKK
Sbjct: 532 NYSAMVNGYCEANHVNKAFALLIRLSKQG--------RILKK 565



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 199/459 (43%), Gaps = 34/459 (7%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K+  A+ + R++   G  P+  T+   +   C+ G+L +A  V R+M E   +PN  +Y 
Sbjct: 199 KVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYT 258

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
            FI G C     D    +   + N  I  +   + +++   C +  L +A   L E+  +
Sbjct: 259 TFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREM--E 316

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
             G A  DV     L+  Y   G+  +ALAL ++M  K ++T+ V  + ++ G    G  
Sbjct: 317 KQGFA-PDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMA 375

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           S     F +  K G   D   YN +++ LCK GK++EA      +    + PD I+Y T+
Sbjct: 376 SEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTV 435

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I G  + G +V A      M +    P+   +NV+  G+ R G    A S+ + M + GV
Sbjct: 436 ISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGV 495

Query: 433 SSNVFTFNALILAETRGGSIFD-------------------------------AFSLKKE 461
             +  T N +I     GG + D                               AF+L   
Sbjct: 496 KPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIR 555

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
           +   G      ++  L+G  C+ G    AL L + M+   I P +I Y+++I      G 
Sbjct: 556 LSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGE 615

Query: 522 MKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           M++A+ VF  +   GLA D I + I+   Y RM +  +A
Sbjct: 616 MEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEA 654



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 144/293 (49%)

Query: 261 VITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           +++   LM+   ++     A+A++  +    +  +   Y + I GFC  G+++ A   F 
Sbjct: 184 ILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFR 243

Query: 321 QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
            M + G  P+  +Y T +  LC  G+ D        +    +  D  +Y  +I+G C   
Sbjct: 244 DMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEM 303

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            + +A   L  M ++   P+ +++  +I GY   G+L  A ++ D M+S GV +N    +
Sbjct: 304 KLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILS 363

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR 500
           +++   ++ G   +  +  KE    GIF D   YN+++ A C LG +  A++L  EM  +
Sbjct: 364 SILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGK 423

Query: 501 GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
            + PDII YT +I G+  +G + +A  ++ +++ +G   D + + +L   + R
Sbjct: 424 KMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSR 476



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/381 (22%), Positives = 150/381 (39%), Gaps = 38/381 (9%)

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           G  ++A  V+ +      +P   + N  +       ++D A+ ++  +   G+ PN  T+
Sbjct: 163 GMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTY 222

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
            I +   C+KG L                                       +A+ ++ D
Sbjct: 223 TIAIKGFCRKGNLA--------------------------------------EAIDVFRD 244

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +  +  +  +Y   I G CL+G     F     ++      DV  Y  ++   C + K
Sbjct: 245 MEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMK 304

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           L EA      + K G APD   Y  +I G C+ G+++KA      M+ K V     I + 
Sbjct: 305 LKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSS 364

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           I+ G  + G  S   +        G+  +   +N ++ A  + G + +A  L  EM    
Sbjct: 365 ILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKK 424

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           + PD+  Y  +I      G +  AL +Y EM   G  PDI+TY  L  G    G  +EA 
Sbjct: 425 MVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEAL 484

Query: 527 EVFAKIQTLGLAIDHIPFRIL 547
            +   ++T G+  D +   ++
Sbjct: 485 SLLNYMETQGVKPDTVTHNMI 505



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 157/364 (43%), Gaps = 20/364 (5%)

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
           NE   A   F+ +  +G   +  T+  +V  LC  G        L E++   DG     +
Sbjct: 71  NEPSLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEII-KKDGNLDFGI 129

Query: 262 ITSTILMDSYFKNGDKFQALA--LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +             + F+AL   + N+ F   +Q      + LI     +G    AF   
Sbjct: 130 V-------------NLFEALGDGIANESFSVLVQVS----DALIKVCVASGMFDQAFDVL 172

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            Q    GF P +++ N L+N L +  K+D A   Y  L   G+ P+  +Y   I+G C  
Sbjct: 173 LQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRK 232

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G++ +A +    M E  V P    +   I+G    G     F +   +++  +  +VF +
Sbjct: 233 GNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAY 292

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
             +I        + +A S+ +EM   G  PDV+ Y  LI   C +G++  AL L+DEM+ 
Sbjct: 293 TVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVS 352

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
           +G+  + +  + +++G    G   E    F + + +G+  D   + ++     ++ + ++
Sbjct: 353 KGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEE 412

Query: 560 ARDI 563
           A ++
Sbjct: 413 AVEL 416



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 136/306 (44%), Gaps = 28/306 (9%)

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           N +F+ N    ++  N L N      + S AF+YF Q+ + G+  D  TY  ++  LC  
Sbjct: 52  NHLFEINTAKVVITLNNLRN------EPSLAFSYFNQLKESGYSHDPYTYAAIVRILCFW 105

Query: 345 G---KLD---------EASHFYGVLSKTGVAPDQI---SYKTIIQ------GLCI-HGDI 382
           G   KLD         + +  +G+++      D I   S+  ++Q       +C+  G  
Sbjct: 106 GWSRKLDSILMEIIKKDGNLDFGIVNLFEALGDGIANESFSVLVQVSDALIKVCVASGMF 165

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A + LL        P+    N +++       +  A +I   + +FG++ N +T+   
Sbjct: 166 DQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIA 225

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    R G++ +A  + ++M   G+ P+ F+Y   I   C  G   L  ++  +++   I
Sbjct: 226 IKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKI 285

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
             D+  YT +I+G C+   +KEAE +  +++  G A D   +  L   Y  +    KA  
Sbjct: 286 PMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALA 345

Query: 563 IHQKWL 568
           +H + +
Sbjct: 346 LHDEMV 351


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 222/493 (45%), Gaps = 49/493 (9%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI  LC   K+  A  L ++M   G  PDV T+  L++  CK G +E+A    
Sbjct: 287 DTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWF 346

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM  +  S N  TY A +  Y +  +L +A  +F+ M + G  PN +T++ LV  LCK 
Sbjct: 347 DEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKA 406

Query: 237 GLLGDAVKFLGEVLADDD---------GKAT----SDVITSTILMDSYFKNGDKFQALAL 283
           G +  A +   +++   D         GK T     +V+T   L+D   K      A  L
Sbjct: 407 GEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQEL 466

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            + M     + + + Y+ LI+GFC  G I +A   F +M K G+LP V TY +L++ + K
Sbjct: 467 LDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFK 526

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
             +LD A      + ++   P+ ++Y  +I GLC  G+  KA + L  M EK   P    
Sbjct: 527 DRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVT 586

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM- 462
           +  +IDG G+ G +  +  +   M + G + N  T+  LI      G + +A SL  EM 
Sbjct: 587 YTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK 646

Query: 463 ---------------------------LLD-----GIFPDVFTYNLLIGASCNLGHIHLA 490
                                      LL+     G  P    Y LLI      G +  A
Sbjct: 647 QTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEA 706

Query: 491 LQLYDEMLRRGITPDIIT---YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           L+L+ EM+    + +I +   YT LI+  C    +++A E++++I   G+  +   F  L
Sbjct: 707 LELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCL 766

Query: 548 KKRYRRMKESDKA 560
            K   ++ + ++A
Sbjct: 767 IKGLIKVNKWNEA 779



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 203/455 (44%), Gaps = 30/455 (6%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGT------ALWLRRKMIQKGTVPDVL 154
           LK M D     C     Y  +   I  +C G ++ +      A  +  +M+    V + +
Sbjct: 200 LKRMAD-----CGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKV 254

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
                   LC +G  + A  +I+ M      P+ +TY+  IT  C   +++KA  LF  M
Sbjct: 255 NTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEM 314

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            + G+ P+  T+ IL+ + CK GL+  A  +  E+ +      +++V+T T L+ +Y K 
Sbjct: 315 KSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIG---CSANVVTYTALLHAYLKA 371

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG-------- 326
               QA  ++N M       + + Y+ L++G C  G+I  A   + +++           
Sbjct: 372 KQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFY 431

Query: 327 --------FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
                     P+V+TY  L++ LCK  K+ +A      +   G  P+ I Y  +I G C 
Sbjct: 432 FEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCK 491

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G I  A+E  L M +   +P  H +  +ID   +   L  A  +   M+    + NV T
Sbjct: 492 VGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVT 551

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           + A+I    R G    A  L   M   G  P+V TY  LI      G + L+LQL+ +M 
Sbjct: 552 YTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMS 611

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            +G  P+ +TY  LI   CA G + EA  + ++++
Sbjct: 612 TKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK 646



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 196/433 (45%), Gaps = 25/433 (5%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK------ADHVIREMSEMRPSPNCAT 190
           A  L ++M   G  P  + +N  +  +C   +L        A+ V  EM       N   
Sbjct: 196 AYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVN 255

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
              F    C + + D A  +   M   G  P+  T++ ++  LC+   +  A     E+ 
Sbjct: 256 TANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEM- 314

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                    DV T TIL+DS+ K G   QA + +++M       ++V Y  L++ +    
Sbjct: 315 --KSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAK 372

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG--------- 361
            +  A   F +M+  G  P+ ITY+ L++ LCK G++ +A   Y  L  T          
Sbjct: 373 QLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYF 432

Query: 362 -------VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
                  +AP+ ++Y  +I GLC    +V A+E L +ML     P   I++ +IDG+ + 
Sbjct: 433 EGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKV 492

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G + NA  +   M   G    V T+ +LI A  +   +  A  +  +M+     P+V TY
Sbjct: 493 GKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTY 552

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
             +I   C +G    AL+L   M  +G +P+++TYT LI G    G +  + ++F ++ T
Sbjct: 553 TAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMST 612

Query: 535 LGLAIDHIPFRIL 547
            G A +++ +R+L
Sbjct: 613 KGCAPNYVTYRVL 625



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/463 (23%), Positives = 189/463 (40%), Gaps = 28/463 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+++ L   G++     ++++M + G   D  T       LCK G    A  +I      
Sbjct: 45  ALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVMIEREDFK 104

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +  C      I+G    +  D+A+     M  N   PN VT+  L+    KK  LG  
Sbjct: 105 LDTVLC---TQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWC 161

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + +  ++  +       +  S  L+ SY    D   A  L   M         VAYN+ 
Sbjct: 162 KRII-NMMMKEGCNPNPSLFNS--LVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIF 218

Query: 303 INGFCLNGDISS------AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           I   C   ++ S      A   + +ML    + + +       CLC  GK D A     V
Sbjct: 219 IGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKV 278

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   G  PD  +Y  +I  LC    + KA      M    V P+ + + ++ID + + G 
Sbjct: 279 MMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGL 338

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A S  D M S G S+NV T+ AL+ A  +   +  A  +   M+  G  P+  TY+ 
Sbjct: 339 IEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSA 398

Query: 477 LIGASCNLGHIHLALQLYDEML----------------RRGITPDIITYTELIKGHCARG 520
           L+   C  G I  A ++Y +++                   I P+++TY  LI G C   
Sbjct: 399 LVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAH 458

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            + +A+E+   + + G   +HI +  L   + ++ + D A+++
Sbjct: 459 KVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEV 501



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/401 (23%), Positives = 178/401 (44%), Gaps = 20/401 (4%)

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           E+ +    P+ ATYNA +       ++D    +   M+ +G   ++ T      ALCK+G
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTI--LMDSYFKNGDKFQALALWNDMFQKNIQTD 295
              DA+     ++  +D K  + + T  I  LM++   +    +A++  + M   +   +
Sbjct: 90  RWSDALV----MIEREDFKLDTVLCTQMISGLMEASLFD----EAISFLHRMRCNSCIPN 141

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           +V Y  L+ GF     +         M+K G  P+   +N+L++  C       A     
Sbjct: 142 VVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLK 201

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK---SVVPEPHIWNVI-IDGY 411
            ++  G  P  ++Y   I  +C  G+ + + + LL++ EK    ++    + N +    +
Sbjct: 202 RMADCGCPPGYVAYNIFIGSIC-GGEELPSPD-LLALAEKVYEEMLASSCVLNKVNTANF 259

Query: 412 GRC----GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
            RC    G    AF I  +M+  G   +  T++ +I        +  AF L +EM   G+
Sbjct: 260 ARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGV 319

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            PDV+TY +LI + C  G I  A   +DEM   G + +++TYT L+  +     + +A +
Sbjct: 320 NPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASD 379

Query: 528 VFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +F ++   G   + I +  L     +  E  KA +++ K +
Sbjct: 380 IFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLI 420



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 3/116 (2%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT-- 190
           K   +L L  ++   GTVP    +  L++   K G LE+A  + +EM E+  S N  +  
Sbjct: 667 KFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKD 726

Query: 191 -YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
            Y + I   C  ++L+KA  L+S +   G+ P       L+  L K     +A++ 
Sbjct: 727 MYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQL 782



 Score = 40.0 bits (92), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 23/99 (23%), Positives = 50/99 (50%), Gaps = 3/99 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT---HNYLVNELCKIGDLEKADHVIREMS 180
           +I +    G++  AL L ++M++  +  ++ +   +  L+  LC    LEKA  +  E++
Sbjct: 693 LIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEIT 752

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
                P  + +   I G  +VN+ ++AL L  ++ + G+
Sbjct: 753 RKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 181/379 (47%), Gaps = 19/379 (5%)

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           LC +G  EKA  +++EM      P+ +TY   IT  C+  +++K+  LF  M   G+ P+
Sbjct: 427 LCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPD 486

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
             T+ IL+ + CK GL+  A  +  E+ +      + +V+T T L+ +Y K+    QA  
Sbjct: 487 VYTYTILIDSFCKAGLIEQARSWFDEMRSVG---CSPNVVTYTALLHAYLKSKQLIQAHD 543

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG---------------- 326
           +++ M       + V Y+ LI+G C  G+I  A   + +++                   
Sbjct: 544 IFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCT 603

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+V+TY  L++ LCK  K+ +A      +   G  P+QI Y  +I G C  G I  A+
Sbjct: 604 IAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQ 663

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E  L M +   +P  H +  +ID   + G L  A  +   ML+   + NV T+ A+I   
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGL 723

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
           ++ G I  A +L   M   G  P+V TY  LI      G    +L+L+ +M  +G  P+ 
Sbjct: 724 SKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNY 783

Query: 507 ITYTELIKGHCARGNMKEA 525
           +TY  LI   CA G + EA
Sbjct: 784 VTYRVLINHCCAAGLLDEA 802



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 172/381 (45%), Gaps = 22/381 (5%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI  LC   K+  +  L ++M + G  PDV T+  L++  CK G +E+A    
Sbjct: 451 DTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWF 510

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM  +  SPN  TY A +  Y +  +L +A  +F  M +    PN VT++ L+  LCK 
Sbjct: 511 DEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKA 570

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G +  A +   E L    G   SD          YF+  D               I  ++
Sbjct: 571 GEIQKACEVY-EKLIGTSGNVESDF---------YFEGNDTC------------TIAPNV 608

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  LI+G C    +S A      ML  G  P+ I Y+ L++  CK GK+D A   +  
Sbjct: 609 VTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLR 668

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           ++K G  P   +Y ++I  +   G +  A + L  ML  S  P    +  +IDG  + G+
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGE 728

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A ++  LM   G S NV T+ ALI    + G    +  L K+M   G  P+  TY +
Sbjct: 729 IEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRV 788

Query: 477 LIGASCNLGHIHLALQLYDEM 497
           LI   C  G +  A  L DEM
Sbjct: 789 LINHCCAAGLLDEAHLLLDEM 809



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 199/447 (44%), Gaps = 25/447 (5%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD------HVI 176
           +++   C  G    A  L  +M   G+ P  + +N  +  +C   +L  A+       V 
Sbjct: 346 SLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVY 405

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM       N      F    C V + +KA  +   M   G  P+  T+  ++  LC+ 
Sbjct: 406 EEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQA 465

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             +  +     E+          DV T TIL+DS+ K G   QA + +++M       ++
Sbjct: 466 KKVEKSFLLFQEM---KRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNV 522

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  L++ +  +  +  A   F +M+     P+ +TY+ L++ LCK G++ +A   Y  
Sbjct: 523 VTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEK 582

Query: 357 LSKTG----------------VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           L  T                 +AP+ ++Y  +I GLC    +  A E L +ML     P 
Sbjct: 583 LIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPN 642

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
             +++ +IDG+ + G + NA  +   M   G   +V T+ +LI    + G +  A  +  
Sbjct: 643 QIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 702

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           EML D   P+V TY  +I     +G I  AL L   M  +G +P+++TYT LI G    G
Sbjct: 703 EMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTG 762

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRIL 547
               + ++F ++ + G A +++ +R+L
Sbjct: 763 KADASLKLFKQMNSKGCAPNYVTYRVL 789



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 175/392 (44%), Gaps = 24/392 (6%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMI-QKGTV---------------PDVLTHNYLVNELC 164
           + A+I  LC  G+I  A  +  K+I   G V               P+V+T+  L++ LC
Sbjct: 560 YSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLC 619

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           K   +  A  ++  M      PN   Y+A I G+C++ ++D A  +F  M   G  P+  
Sbjct: 620 KAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVH 679

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           T+  L+  + K G L  A+K L E+L D       +V+T T ++D   K G+  +AL L 
Sbjct: 680 TYTSLIDRMFKDGRLDLAMKVLSEMLNDS---CNPNVVTYTAMIDGLSKVGEIEKALNLL 736

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           + M +K    ++V Y  LI+G    G   ++   F QM  +G  P+ +TY  L+N  C  
Sbjct: 737 SLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAA 796

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
           G LDEA      +  T        Y   +QG       + +   L  M     VP   ++
Sbjct: 797 GLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF--SKKFIASLGLLEEMESHETVPIAPVY 854

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT---FNALILAETRGGSIFDAFSLKKE 461
            ++ID + + G L  A  +   ++    S N+ +   + +LI A      + +AF+L  E
Sbjct: 855 GMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTE 914

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQL 493
           M   GI PD+  +  L+     +     ALQL
Sbjct: 915 MTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 113/492 (22%), Positives = 203/492 (41%), Gaps = 37/492 (7%)

Query: 96  ENLDRLKTMRDTG--PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           E L+ L  ++D G  P   T       + A+++ L   G++     ++++M   G   D 
Sbjct: 187 EALEELGRLKDFGYRPSAVT-------YNALVQVLASAGQVEMGFRVQKEMSASGFCMDR 239

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
            T  Y    LCK+G    A +++ +      +  C      I+G    +  ++A+     
Sbjct: 240 STIGYFAQALCKVGRWADALNMLEKEDFNLDTVLC---TQMISGLMEASLFNEAMSFLHR 296

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M  N   PN VT+  L+    KK   G   + +  ++ +      S +  S  L+  Y  
Sbjct: 297 MRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPS-LFNS--LVHGYCN 353

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF------AYFCQMLKRGF 327
            GD   A  L+N M         VAYN+ I   C   ++ +A         + +ML    
Sbjct: 354 AGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASC 413

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           + + +       CLC  GK ++A      + + G  PD  +Y  +I  LC    + K+  
Sbjct: 414 VLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFL 473

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M    V P+ + + ++ID + + G +  A S  D M S G S NV T+ AL+ A  
Sbjct: 474 LFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYL 533

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG------ 501
           +   +  A  +   M+    +P+  TY+ LI   C  G I  A ++Y++++         
Sbjct: 534 KSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESD 593

Query: 502 ----------ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
                     I P+++TY  LI G C    + +A E+   +   G   + I +  L   +
Sbjct: 594 FYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGF 653

Query: 552 RRMKESDKARDI 563
            ++ + D A+++
Sbjct: 654 CKIGKIDNAQEV 665



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/410 (22%), Positives = 171/410 (41%), Gaps = 35/410 (8%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N LV   C+ G  ++A   +  + +    P+  TYNA +       +++    +   M+ 
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
           +G   +R T      ALCK G   DA+  L +   + D    + +I+   LM++   N  
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISG--LMEASLFN-- 288

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A++  + M   +   ++V Y  L++GF               M+  G  P+   +N+
Sbjct: 289 --EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNS 346

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L++  C  G    A   +  ++  G  P  ++Y   I  +C   ++  A   LL ++EK 
Sbjct: 347 LVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAE--LLDLVEK- 403

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           V  E    + +++                         N   F+  +      G    AF
Sbjct: 404 VYEEMLAASCVLN-----------------------KVNTANFSRCLCGV---GKFEKAF 437

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            + KEM+  G  PD  TY  +I   C    +  +  L+ EM R G+ PD+ TYT LI   
Sbjct: 438 QILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSF 497

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           C  G +++A   F +++++G + + + +  L   Y + K+  +A DI  +
Sbjct: 498 CKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHR 547



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 148/358 (41%), Gaps = 53/358 (14%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           CT+  +   + A+I  LC   K+  A  L   M+  G  P+ + ++ L++  CKIG ++ 
Sbjct: 602 CTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDN 661

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A  V   M++    P+  TY + I    +   LD A+ + S M N+   PN VT+  ++ 
Sbjct: 662 AQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMID 721

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            L K G +  A+  L   L ++ G  + +V+T T L+D   K G    +L L+  M  K 
Sbjct: 722 GLSKVGEIEKALNLLS--LMEEKG-CSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKG 778

Query: 292 IQTDIVAYNVLINGFCLNGDISSAF----------------AYFC--------------- 320
              + V Y VLIN  C  G +  A                  Y C               
Sbjct: 779 CAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGL 838

Query: 321 --QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS---YKTIIQG 375
             +M     +P    Y  L++   K G+L+ A   +  L +   + +  S   Y ++IQ 
Sbjct: 839 LEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQA 898

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG--------------YGRCGDLSN 419
           LC+   + +A      M  K +VP+  ++  ++ G              YGRC +  N
Sbjct: 899 LCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEGVN 956



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 129/274 (47%), Gaps = 33/274 (12%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
            +C        + ++I  +   G++  A+ +  +M+     P+V+T+  +++ L K+G++
Sbjct: 670 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEI 729

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           EKA +++  M E   SPN  TY A I G  +  + D +L LF  M + G  PN VT+ +L
Sbjct: 730 EKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVL 789

Query: 230 VHALCKKGLLGDA---------------------------VKFLGEVLADDDGKATSDVI 262
           ++  C  GLL +A                            KF+  +   ++ ++   V 
Sbjct: 790 INHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVP 849

Query: 263 TSTI---LMDSYFKNGDKFQALALWNDMFQKNIQTDIVA---YNVLINGFCLNGDISSAF 316
            + +   L+DS+ K G    AL L  ++ + +   ++ +   Y  LI   CL   +  AF
Sbjct: 850 IAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAF 909

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             + +M ++G +PD+I + +L+  L +  K DEA
Sbjct: 910 TLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEA 943


>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
 gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 738

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 215/442 (48%), Gaps = 15/442 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + AVIR  C   K+  A  +  +M ++G VPDV  +  LV+  C   + +KA  V + M 
Sbjct: 298 YTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMI 357

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALH---LFSTMANNGIRPNRVTHNILVHALCKKG 237
                 NC  ++  +  +C ++E+ +AL    +F     +G+  +R  +NIL  ALCK G
Sbjct: 358 SRGIKTNCVIFSCIL--HC-LDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLG 414

Query: 238 LLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            + DAV  L E+      +   D+   T L++ YF  G   +A +L+ +M ++  + D+V
Sbjct: 415 KVDDAVGMLDEL---KSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVV 471

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
           AYNVL  GF  N     A      M  +G  P+  T+  ++  LC  GK++EA  F+  L
Sbjct: 472 AYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWL 531

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREF------LLSMLEKSVVPEPHIWNVIIDGY 411
               V      Y  ++ G C    I K+ E       L +MLE ++ P   +++ I    
Sbjct: 532 KGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTAL 591

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
              G++  A ++ +L +  G + +  T+  +I    +   + +A  L K+M   GI PD 
Sbjct: 592 CCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDA 651

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TY ++I   C +  +  A +L+ +M  RGI PD+I YT +IKG    G+ + A +++ +
Sbjct: 652 VTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNE 711

Query: 532 IQTLGLAIDHIPFRILKKRYRR 553
           +  +G+       R ++K  +R
Sbjct: 712 MIDMGMTPGATLKRCIQKANKR 733



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 203/499 (40%), Gaps = 73/499 (14%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  L    ++  AL L  +    G + +  T+  ++  LCK GD E    V  EM E  
Sbjct: 196 LINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAG 255

Query: 184 PSPNCATYNAFITGYCRVN-----------------------------------ELDKAL 208
              +   Y  FI G C+ N                                   +LD+A 
Sbjct: 256 VDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAE 315

Query: 209 HLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA----------------- 251
            +F  M   G+ P+   +  LVH  C       A+     +++                 
Sbjct: 316 SVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCL 375

Query: 252 DDDGKATS---------------DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           D+ G+A                 D     IL D+  K G    A+ + +++    +  D+
Sbjct: 376 DEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDM 435

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
             Y  LING+ L G    A + F +M +RGF PDV+ YN L     +     EA      
Sbjct: 436 KHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNY 495

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG- 415
           +   GV P+  ++K II+GLC  G + +A EF   +  +SV     I+  +++GY     
Sbjct: 496 MESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAAL 555

Query: 416 -----DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
                +L  AF +   ML   +  +   ++ +  A    G++  A +L    +  G  PD
Sbjct: 556 IEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPD 615

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
             TY ++I   C    +  A +L+ +M  RGITPD +TYT +I G+C    ++EA E+F 
Sbjct: 616 AVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFK 675

Query: 531 KIQTLGLAIDHIPFRILKK 549
            ++  G+  D I + ++ K
Sbjct: 676 DMKERGIKPDVIAYTVIIK 694



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 181/407 (44%), Gaps = 32/407 (7%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           ++   C    L++A+ V  EM +    P+   Y A + GYC     DKAL ++ +M + G
Sbjct: 301 VIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRG 360

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           I+ N V  + ++H L + G   + V    E     +     D     IL D+  K G   
Sbjct: 361 IKTNCVIFSCILHCLDEMGRALEVVDMFEEF---KESGLFIDRKAYNILFDALCKLGKVD 417

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
            A+ + +++    +  D+  Y  LING+ L G    A + F +M +RGF PDV+ YN L 
Sbjct: 418 DAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLA 477

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
               +     EA      +   GV P+  ++K II+GLC  G + +A EF   +  +SV 
Sbjct: 478 AGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVE 537

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
               I+  +++GY     +  +  +++                             AF L
Sbjct: 538 ISVEIYTALVNGYCEAALIEKSHELKE-----------------------------AFIL 568

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            + ML   + P    Y+ +  A C  G++  A  L++  +  G TPD +TYT +I G+C 
Sbjct: 569 LRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCK 628

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
              + EA E+F  ++  G+  D + + I+   Y +M    +A ++ +
Sbjct: 629 TNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFK 675



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 157/344 (45%), Gaps = 14/344 (4%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E +D  +  +++G     L  D + +  +   LC  GK+  A+ +  ++       D+  
Sbjct: 383 EVVDMFEEFKESG-----LFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKH 437

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +  L+N     G   +A  + +EM E    P+   YN    G+ R     +A+ L + M 
Sbjct: 438 YTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYME 497

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYF--- 272
           + G+ PN  TH I++  LC  G + +A +F    L  +  + + ++ T+  L++ Y    
Sbjct: 498 SQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFN-WLKGESVEISVEIYTA--LVNGYCEAA 554

Query: 273 ---KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K+ +  +A  L   M + N++   V Y+ +    C NG++  A   F   +  GF P
Sbjct: 555 LIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTP 614

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           D +TY  ++N  CK   L EA   +  + + G+ PD ++Y  +I G C    + +A E  
Sbjct: 615 DAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELF 674

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
             M E+ + P+   + VII G    G    AF + + M+  G++
Sbjct: 675 KDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMT 718



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 176/401 (43%), Gaps = 3/401 (0%)

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           +E  D +++    +   PN  ++N  I    + +E+D AL LF    + G+  N  T+ I
Sbjct: 171 VEAIDFLLQTRKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTI 230

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           ++ ALCKKG   + V+   E+    +     D       ++   KN       A+  D  
Sbjct: 231 VIKALCKKGDWENVVRVFDEM---KEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYR 287

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
            +N      AY  +I GFC    +  A + F +M K+G +PDV  Y  L++  C     D
Sbjct: 288 TRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFD 347

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           +A   Y  +   G+  + + +  I+  L   G  ++  +      E  +  +   +N++ 
Sbjct: 348 KALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILF 407

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           D   + G + +A  + D + S  +  ++  +  LI      G   +A SL KEM   G  
Sbjct: 408 DALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFK 467

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PDV  YN+L            A+ L + M  +G+ P+  T+  +I+G C+ G ++EAEE 
Sbjct: 468 PDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEF 527

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
           F  ++   + I    +  L   Y      +K+ ++ + ++L
Sbjct: 528 FNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFIL 568



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/422 (22%), Positives = 184/422 (43%), Gaps = 21/422 (4%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNA-FITGYCRVNEL 204
           Q G   ++ T+  ++  LC      K D +  ++ +      C   N  F + +  VN++
Sbjct: 88  QHGFSHNIQTYTSIIRILCYYNLDRKLDSLFLDIIDHSKQDPCFEINVLFDSLFEGVNDV 147

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           ++  +LF+  A NG     V+ N+ V          +A+ FL  +    +     ++++ 
Sbjct: 148 NEDHYLFN--AFNGFVKACVSQNMFV----------EAIDFL--LQTRKNVVILPNILSF 193

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
             L++   K+ +   AL L+       +  +   Y ++I   C  GD  +    F +M +
Sbjct: 194 NFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKE 253

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI---SYKTIIQGLCIHGD 381
            G   D   Y T +  LCK  + D     Y VL         +   +Y  +I+G C    
Sbjct: 254 AGVDDDSYCYATFIEGLCKNNRSDLG---YAVLQDYRTRNAHVHKYAYTAVIRGFCNETK 310

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + +A    L M ++ +VP+ +++  ++ GY    +   A ++   M+S G+ +N   F+ 
Sbjct: 311 LDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSC 370

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           ++      G   +   + +E    G+F D   YN+L  A C LG +  A+ + DE+    
Sbjct: 371 ILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQ 430

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKAR 561
           +  D+  YT LI G+  +G   EA+ +F +++  G   D + + +L   + R +   +A 
Sbjct: 431 LDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAM 490

Query: 562 DI 563
           D+
Sbjct: 491 DL 492



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 128/302 (42%), Gaps = 32/302 (10%)

Query: 298 AYNVLINGFCLNGDISSAFAYFCQML-KRGFLPDVITYNTLLNCLCKQG---KLDEASHF 353
            + +L   +    + S A++YF Q+  + GF  ++ TY +++  LC      KLD  S F
Sbjct: 61  TFKILQKLYLYQNNPSLAYSYFTQLKNQHGFSHNIQTYTSIIRILCYYNLDRKLD--SLF 118

Query: 354 YGVLSKTGVAP---DQISYKTIIQGL-------------------CIHGDI-VKAREFLL 390
             ++  +   P     + + ++ +G+                   C+  ++ V+A +FLL
Sbjct: 119 LDIIDHSKQDPCFEINVLFDSLFEGVNDVNEDHYLFNAFNGFVKACVSQNMFVEAIDFLL 178

Query: 391 SMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
               K+VV  P+I  +N +I+   +  ++  A  +     SFG+  N +T+  +I A  +
Sbjct: 179 QT-RKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCK 237

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G   +   +  EM   G+  D + Y   I   C      L   +  +   R        
Sbjct: 238 KGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYA 297

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           YT +I+G C    + EAE VF +++  GL  D   +  L   Y   +  DKA  +++  +
Sbjct: 298 YTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMI 357

Query: 569 LR 570
            R
Sbjct: 358 SR 359


>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
          Length = 595

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 203/394 (51%), Gaps = 3/394 (0%)

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           + +N +++ LCK   L++A+ ++   +    +P+   Y+  I  YC++  L KA+  +  
Sbjct: 1   MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M ++GI  N    + L+    K G+  + + +    L   D     D +   I MD+Y K
Sbjct: 61  MVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYF---LKFKDSGLHLDKVIYNIAMDTYCK 117

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
           NG+  +A+ L N+M    +  D + Y  LING+CL G++ +A   F +MLK    PD++T
Sbjct: 118 NGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVT 177

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN L +  CK G + E       ++  G+ P+ ++Y   I G C  G++ +A      + 
Sbjct: 178 YNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVE 237

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           EK +     +++ ++ GY   G   +A+ +   +   G   + F+ + LI    R G++ 
Sbjct: 238 EKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQ 297

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
            A ++ K ML   + PDV +Y+ LI   C  G +  A   + +M++RG++ D+I YT L+
Sbjct: 298 GASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILM 357

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G+C  G ++EA ++F ++  LG+  D I + +L
Sbjct: 358 NGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVL 391



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 210/412 (50%), Gaps = 25/412 (6%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D + +N  ++  CK G++ +A  ++ EM     +P+   Y   I GYC   E+  A  +F
Sbjct: 104 DKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVF 163

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M    I P+ VT+NIL    CK GL+ +    L + +AD   +  S  +T  I +  +
Sbjct: 164 EEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLL-DRMADQGLEPNS--LTYGIAIVGF 220

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            + G+  +A  L+N + +K I    V Y+ ++ G+ L+G    A+  F ++ ++G L D 
Sbjct: 221 CRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDH 280

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            + + L+N LC+ G +  AS+   ++ +  V PD ISY  +I   C +GD+ KA  +   
Sbjct: 281 FSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHD 340

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI-------- 443
           M+++ +  +  ++ ++++GY + G L  A  +   M + G+  +V  +  L+        
Sbjct: 341 MVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETL 400

Query: 444 ------LAETRGGSIFDA-----FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
                 +A+ R   +  A      S  K+M ++   PDV  Y +LI   C   ++  A +
Sbjct: 401 QQGWEGIAKERRSFLLRANHNKLLSSMKDMQIE---PDVPCYTVLIDGKCKAEYLVEARE 457

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           L+DEML++G+TPD   YT LI G+C++G + +AE++  ++   G+  D + F
Sbjct: 458 LFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTF 509



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 215/501 (42%), Gaps = 64/501 (12%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC   ++  A  L     ++G+ PDV  ++YL+   CK+G+L KA      M    
Sbjct: 6   VMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHG 65

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              NC   +  +  + ++    + +  F    ++G+  ++V +NI +   CK G + +AV
Sbjct: 66  IETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAV 125

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L E+     G  T D I  T L++ Y   G+   A  ++ +M + NI+ DIV YN+L 
Sbjct: 126 KLLNEMKC---GGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILA 182

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +GFC +G +   F    +M  +G  P+ +TY   +   C+ G L EA   + V+ + G+ 
Sbjct: 183 SGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGID 242

Query: 364 PDQISYKTIIQG-----------------------------------LCIHGDIVKAREF 388
             ++ Y +++ G                                   LC  G++  A   
Sbjct: 243 HIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNV 302

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
              MLE +VVP+   ++ +I  Y + GD+  A      M+  G+S +V  +  L+    +
Sbjct: 303 CKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCK 362

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ---------------- 492
            G + +A  L  +M   GI PDV  Y +L+      GH+   LQ                
Sbjct: 363 AGRLQEACQLFVQMTNLGIKPDVIAYTVLLD-----GHLKETLQQGWEGIAKERRSFLLR 417

Query: 493 -----LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
                L   M    I PD+  YT LI G C    + EA E+F ++   GL  D   +  L
Sbjct: 418 ANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTAL 477

Query: 548 KKRYRRMKESDKARDIHQKWL 568
              Y    E  KA D+ Q+ +
Sbjct: 478 INGYCSQGEISKAEDLLQEMI 498



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 183/426 (42%), Gaps = 71/426 (16%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  A+ L  +M   G  PD + +  L+N  C  G+++ A  V  EM +    P+ 
Sbjct: 116 CKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDI 175

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN   +G+C+   + +   L   MA+ G+ PN +T+ I +   C+ G L +A      
Sbjct: 176 VTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNV 235

Query: 249 VLADDDGKATSDVITSTILMDSYFKNG-------------------DKFQALALWND--- 286
           V  ++ G    +V+ S+++   Y  +G                   D F    L ND   
Sbjct: 236 V--EEKGIDHIEVMYSSMVC-GYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCR 292

Query: 287 -------------MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
                        M + N+  D+++Y+ LI+ +C NGD+  A  +F  M++RG   DVI 
Sbjct: 293 VGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIV 352

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           Y  L+N  CK G+L EA   +  ++  G+ PD I+Y  ++ G                  
Sbjct: 353 YTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDG------------------ 394

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR-------DLMLSFGVSSNVFTFNALILAE 446
                   H+   +  G+        +F +R         M    +  +V  +  LI  +
Sbjct: 395 --------HLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGK 446

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            +   + +A  L  EML  G+ PD + Y  LI   C+ G I  A  L  EM+ +GI PD 
Sbjct: 447 CKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDE 506

Query: 507 ITYTEL 512
           +T++E+
Sbjct: 507 LTFSEV 512



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 176/378 (46%), Gaps = 19/378 (5%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  +I   CL G++  A  +  +M++    PD++T+N L +  CK G + +  
Sbjct: 136 LTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVF 195

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++  M++    PN  TY   I G+CR   L +A  LF+ +   GI    V ++ +V   
Sbjct: 196 DLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGY 255

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
              G    A      V    +     D  + + L++   + G+   A  +   M + N+ 
Sbjct: 256 LLSGWTDHAYMLFVRVARQGN---LVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVV 312

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+++Y+ LI+ +C NGD+  A  +F  M++RG   DVI Y  L+N  CK G+L EA   
Sbjct: 313 PDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQL 372

Query: 354 YGVLSKTGVAPDQISYKTIIQGLC-------IHGDIVKAREFLL---------SMLEKSV 397
           +  ++  G+ PD I+Y  ++ G           G   + R FLL         SM +  +
Sbjct: 373 FVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQI 432

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P+   + V+IDG  +   L  A  + D ML  G++ + + + ALI      G I  A  
Sbjct: 433 EPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAED 492

Query: 458 LKKEMLLDGIFPDVFTYN 475
           L +EM+  GI PD  T++
Sbjct: 493 LLQEMIDKGIEPDELTFS 510



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 171/362 (47%), Gaps = 3/362 (0%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            YN  + G C+   LD+A  L    A  G  P+   ++ L+ + CK G L  AV     +
Sbjct: 2   AYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAM 61

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           ++   G  T+  I S  L+  + K G   + +A +       +  D V YN+ ++ +C N
Sbjct: 62  VSH--GIETNCHIVS-YLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKN 118

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G+++ A     +M   G  PD I Y  L+N  C +G++  A   +  + K  + PD ++Y
Sbjct: 119 GNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTY 178

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             +  G C  G +++  + L  M ++ + P    + + I G+ R G+LS A  + +++  
Sbjct: 179 NILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEE 238

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+      +++++      G    A+ L   +   G   D F+ + LI   C +G++  
Sbjct: 239 KGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQG 298

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A  +   ML   + PD+I+Y++LI  +C  G+M +A   F  +   GL+ID I + IL  
Sbjct: 299 ASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMN 358

Query: 550 RY 551
            Y
Sbjct: 359 GY 360


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 200/412 (48%), Gaps = 6/412 (1%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           +++V   C++  +++A      M E    P   T N  ++   R+N ++ A   ++ M  
Sbjct: 160 DFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYR 219

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
             I+ N  T NI+++ LCK+G L  A  FLG ++     K T  ++T   L+  Y   G 
Sbjct: 220 MEIKSNVYTFNIMINVLCKEGKLKKAKGFLG-IMESFGIKPT--IVTYNTLVQGYSLRGR 276

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
              A  + ++M  K  Q D+  YN +++  C  G  S       +M   G +PD ++YN 
Sbjct: 277 IEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLR---EMKGIGLVPDSVSYNI 333

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L+      G L+ A  +   + K G+ P   +Y T+I GL +   I  A   +  + EK 
Sbjct: 334 LIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 393

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           +V +   +N++I+GY + GD   AF++ D M++ G+    FT+ +LI    R     +A 
Sbjct: 394 IVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREAD 453

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L ++++  G+ PD+   N L+   C  G++  A  L  EM R  I PD +TY  L++G 
Sbjct: 454 ELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGL 513

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           C  G  +EA E+  +++  G+  DHI +  L   Y +  ++  A  +  + L
Sbjct: 514 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEML 565



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 199/420 (47%), Gaps = 6/420 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M +KG  P   T N++++ L ++  +E A     +M  M    N  T+N  I   C+  +
Sbjct: 182 MKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 241

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           L KA      M + GI+P  VT+N LV     +G +  A   + E+ +        D+ T
Sbjct: 242 LKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKG---FQPDLQT 298

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
              ++      G   +A  +  +M    +  D V+YN+LI G   NGD+ +AFAY  +M+
Sbjct: 299 YNPILSWMCNEG---RASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMV 355

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           K+G +P   TYNTL++ L  + K++ A      + + G+  D ++Y  +I G C HGD  
Sbjct: 356 KQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAK 415

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           KA      M+   + P    +  +I    R      A  + + ++  G+  ++   N L+
Sbjct: 416 KAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLM 475

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                 G++  AFSL KEM    I PD  TYN L+   C  G    A +L  EM RRGI 
Sbjct: 476 DGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIK 535

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PD I+Y  LI G+  +G+ K A  V  ++ +LG     + +  L K   + ++ + A ++
Sbjct: 536 PDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEEL 595



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 185/394 (46%), Gaps = 8/394 (2%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           +V T N ++N LCK G L+KA   +  M      P   TYN  + GY     ++ A  + 
Sbjct: 225 NVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMII 284

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTILMDS 270
           S M + G +P+  T+N ++  +C +G          EVL +  G     D ++  IL+  
Sbjct: 285 SEMKSKGFQPDLQTYNPILSWMCNEGRAS-------EVLREMKGIGLVPDSVSYNILIRG 337

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
              NGD   A A  ++M ++ +      YN LI+G  +   I +A     ++ ++G + D
Sbjct: 338 CSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLD 397

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            +TYN ++N  C+ G   +A   +  +   G+ P Q +Y ++I  LC      +A E   
Sbjct: 398 SVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFE 457

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            ++ K + P+  + N ++DG+   G++  AFS+   M    +  +  T+N L+      G
Sbjct: 458 KVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEG 517

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
              +A  L  EM   GI PD  +YN LI      G    A  + DEML  G  P ++TY 
Sbjct: 518 KFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYN 577

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            L+KG     + + AEE+  ++++ G+  +   F
Sbjct: 578 ALLKGLSKNQDGELAEELLREMKSEGIVPNDSSF 611



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 162/359 (45%), Gaps = 77/359 (21%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +IR     G + TA   R +M+++G VP   T+N L++ L     +E A+ +IRE+ E  
Sbjct: 334 LIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 393

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TYN  I GYC+  +  KA  L   M  +GI+P + T+  L++ LC++    +A 
Sbjct: 394 IVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREAD 453

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   +V+                                       K ++ D+V  N L+
Sbjct: 454 ELFEKVVG--------------------------------------KGMKPDLVMMNTLM 475

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C  G++  AF+   +M +    PD +TYN L+  LC +GK +EA    G + + G+ 
Sbjct: 476 DGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIK 535

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD ISY T+I                                    GY + GD  +AF +
Sbjct: 536 PDHISYNTLIS-----------------------------------GYSKKGDTKHAFIV 560

Query: 424 RDLMLSFGVSSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           RD MLS G +  + T+NAL+  L++ + G +  A  L +EM  +GI P+  ++  +I A
Sbjct: 561 RDEMLSLGFNPTLLTYNALLKGLSKNQDGEL--AEELLREMKSEGIVPNDSSFCSVIEA 617



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 62/125 (49%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  ++ D   +  ++R LC  GK   A  L  +M ++G  PD +++N L++   K GD +
Sbjct: 496 RMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTK 555

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A  V  EM  +  +P   TYNA + G  +  + + A  L   M + GI PN  +   ++
Sbjct: 556 HAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVI 615

Query: 231 HALCK 235
            A+ K
Sbjct: 616 EAMSK 620


>gi|357463937|ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491298|gb|AES72501.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 946

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 200/439 (45%), Gaps = 36/439 (8%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A I  LC   +      L R + +     DV  +  ++   C    L+KA  V  +M 
Sbjct: 268 YAAYIEGLCNNHQSDLGYDLLRALRENNAPIDVYAYTAVIRGFCNEMKLDKAMQVFYDME 327

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
             R  P+C  Y++ I GYC+ ++L KAL L+  M   GI+ N V  + ++H   + G   
Sbjct: 328 WQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHCFAEMGEDS 387

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
             V    EV          D +   I+ DS FK G   +   +  D+   +I  DI  Y 
Sbjct: 388 RVVDTFKEV---KQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYT 444

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
             I G+CL G    A+  F +M ++GF PDV+ YN L   LC    + EA      +   
Sbjct: 445 TFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQ 504

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GV P+  ++K II+G C  G I +A  +  SM ++SV     I+  ++ GY     +  +
Sbjct: 505 GVKPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDESV----EIYTAMVSGYCEADLIEKS 560

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           + +               F+ L     RG +  ++  LK+   L  +      Y+ ++  
Sbjct: 561 YEL---------------FHEL---SNRGDTAQESSCLKQ---LSKVL-----YSKVLAE 594

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  G++  A  L+D  L RG TPD++TYT +IK +C    ++EA ++F  +++ G+  D
Sbjct: 595 LCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPD 654

Query: 541 HIPFRIL---KKRYRRMKE 556
            I + +L   K +  R KE
Sbjct: 655 VITYTVLLDGKSKQARSKE 673



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 178/424 (41%), Gaps = 75/424 (17%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           L+ LK+M         ++ D + +   I+  CL GK   A  + ++M +KG  PDV+ +N
Sbjct: 428 LEDLKSMH--------IDFDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYN 479

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            L   LC    + +A  ++  M      PN  T+   I G+C   ++++A   F++M + 
Sbjct: 480 VLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDE 539

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG-------KATSDVITSTILMDS 270
            +      +  +V   C+  L+  + +   E+    D        K  S V+ S +L + 
Sbjct: 540 SVE----IYTAMVSGYCEADLIEKSYELFHELSNRGDTAQESSCLKQLSKVLYSKVLAE- 594

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             + G+  +A +L++    +    D+V Y ++I  +C    +  A   F  M  RG  PD
Sbjct: 595 LCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPD 654

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           VITY  LL+   KQ +  E  HF     K   AP  +S  TI +                
Sbjct: 655 VITYTVLLDGKSKQARSKE--HFSSQHGKGKDAPYDVS--TIWR---------------- 694

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M ++ V P+  I+ V+IDG+ +  +  +A  +               FN          
Sbjct: 695 DMKDREVSPDVVIYTVLIDGHIKVDNFEDAIRL---------------FN---------- 729

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
                     E++  G+ PD  TY  L     N G+  +A+ LY+EM  +G+TP +    
Sbjct: 730 ----------EVMKRGLEPDNVTYTALFSGLLNSGNSEIAVTLYNEMSSKGMTPPLHINQ 779

Query: 511 ELIK 514
            ++K
Sbjct: 780 RILK 783



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 148/354 (41%), Gaps = 2/354 (0%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           PN    N  I    + ++++ A  +F  + + G+ PN  T+ I++ AL  KG  GD  + 
Sbjct: 192 PNIFACNFLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKALGTKG--GDLKQA 249

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
            G      +   T +       ++    N        L   + + N   D+ AY  +I G
Sbjct: 250 SGVFDEMKEAGVTPNSYCYAAYIEGLCNNHQSDLGYDLLRALRENNAPIDVYAYTAVIRG 309

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           FC    +  A   F  M  +  +PD   Y++L+   CK   L +A   Y  +   G+  +
Sbjct: 310 FCNEMKLDKAMQVFYDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTN 369

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            +    I+      G+  +  +    + +  V  +   +N++ D   + G +     + +
Sbjct: 370 CVIVSCILHCFAEMGEDSRVVDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLE 429

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            + S  +  ++  +   I      G    A+ + KEM   G  PDV  YN+L    C   
Sbjct: 430 DLKSMHIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNR 489

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           H+  A+ L + M  +G+ P+  T+  +I+G C+ G ++EAE  F  ++   + I
Sbjct: 490 HVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDESVEI 543



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 120/306 (39%), Gaps = 77/306 (25%)

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCL--CKQ----------------------------- 344
           F +  Q+ + G LP++   N L+N L  C Q                             
Sbjct: 179 FMFMFQIRRFGILPNIFACNFLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKA 238

Query: 345 -----GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC---------------------- 377
                G L +AS  +  + + GV P+   Y   I+GLC                      
Sbjct: 239 LGTKGGDLKQASGVFDEMKEAGVTPNSYCYAAYIEGLCNNHQSDLGYDLLRALRENNAPI 298

Query: 378 --------IHG-----DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
                   I G      + KA +    M  + +VP+ H+++ +I GY +  DL  A  + 
Sbjct: 299 DVYAYTAVIRGFCNEMKLDKAMQVFYDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLY 358

Query: 425 DLMLSFGVSSNVFTFNALI--LAETRGGS-IFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           + M+  G+ +N    + ++   AE    S + D F   KE+   G+F D   YN++  + 
Sbjct: 359 EDMILKGIKTNCVIVSCILHCFAEMGEDSRVVDTF---KEVKQSGVFLDGVAYNIVFDSL 415

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
             LG +     + +++    I  DI  YT  IKG+C +G   +A  +F +++  G   D 
Sbjct: 416 FKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDV 475

Query: 542 IPFRIL 547
           + + +L
Sbjct: 476 VAYNVL 481



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 1/184 (0%)

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA-E 446
           F+  +    ++P     N +I+   +C  ++ AF I D + S G+  N  T+  +I A  
Sbjct: 181 FMFQIRRFGILPNIFACNFLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKALG 240

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
           T+GG +  A  +  EM   G+ P+ + Y   I   CN     L   L   +       D+
Sbjct: 241 TKGGDLKQASGVFDEMKEAGVTPNSYCYAAYIEGLCNNHQSDLGYDLLRALRENNAPIDV 300

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             YT +I+G C    + +A +VF  ++   L  D   +  L   Y +  +  KA D+++ 
Sbjct: 301 YAYTAVIRGFCNEMKLDKAMQVFYDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLYED 360

Query: 567 WLLR 570
            +L+
Sbjct: 361 MILK 364


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 199/418 (47%), Gaps = 3/418 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   + AV++ LC+  +      L  +M++ G  P+V T N L+  LC+ G  E+   
Sbjct: 210 EPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHE 269

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
            + +M E   +P+   Y   I G C+    + A  + S M + G++PN V +N ++  LC
Sbjct: 270 ALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLC 329

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
                 +A   L E+  +D      D +T  IL+D + +NG   + + L   M +     
Sbjct: 330 SAERWEEAEDLLAEMFQED---CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIP 386

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           D++ Y  +INGFC  G +  A      M   G  P+ I+Y  +L  LC+  +  +A    
Sbjct: 387 DVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELI 446

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             + + G  P+ +++ T+I  +C  G + +A E L  ML     P+   ++ +IDG G+ 
Sbjct: 447 SHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 506

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G    A  + ++M++ G++ N   ++++  A +R G       +   +    +  D   Y
Sbjct: 507 GKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALY 566

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           N +I + C       A+  +  M+  G  P+  TYT LI+G  + G ++EA+++ +++
Sbjct: 567 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 203/460 (44%), Gaps = 4/460 (0%)

Query: 103 TMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNE 162
           T+ D  P+R    T    HV ++   C GG   +A+   + +  KG   D    N +V+ 
Sbjct: 129 TVLDEMPLRGCAATPPMCHV-ILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSA 187

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           +C+ G +++   ++R++      P+  +YNA + G C     D    L   M   G  PN
Sbjct: 188 ICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPN 247

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
             T N L+  LC+ GL     + L ++    +   T D+     ++D   K+G    A  
Sbjct: 248 VATFNTLIAYLCRNGLFEQVHEALSQM---PEHGCTPDLRMYATIIDGICKDGHHEVAND 304

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
           + + M    ++ ++V YN ++ G C       A     +M +     D +T+N L++  C
Sbjct: 305 ILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFC 364

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           + G +D        + + G  PD I+Y T+I G C  G + +A   L +M      P   
Sbjct: 365 QNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTI 424

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            + +++ G  R     +A  +   M+  G   N  TFN LI    + G +  A  L K+M
Sbjct: 425 SYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQM 484

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           L++G  PD+ +Y+ +I      G    AL+L + M+ +GITP+ I Y+ +       G  
Sbjct: 485 LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRT 544

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
            +  ++F  IQ   +  D   +  +     +  E+D+A D
Sbjct: 545 DKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAID 584



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 123/520 (23%), Positives = 213/520 (40%), Gaps = 73/520 (14%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKG---TVP-------------------------- 151
           +  ++R LC  G I  AL +  +M  +G   T P                          
Sbjct: 111 YFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLH 170

Query: 152 ------DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
                 D    N +V+ +C+ G +++   ++R++      P+  +YNA + G C     D
Sbjct: 171 AKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWD 230

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
               L   M   G  PN  T N L+  LC+ GL     + L ++    +   T D+    
Sbjct: 231 DVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQM---PEHGCTPDLRMYA 287

Query: 266 ILMDSYFKNGDK-----------------------------------FQALALWNDMFQK 290
            ++D   K+G                                      +A  L  +MFQ+
Sbjct: 288 TIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQE 347

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
           +   D V +N+L++ FC NG +        QML+ G +PDVITY T++N  CK+G +DEA
Sbjct: 348 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEA 407

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                 +S  G  P+ ISY  +++GLC     V A+E +  M+++  +P P  +N +I+ 
Sbjct: 408 VMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINF 467

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
             + G +  A  +   ML  G S ++ +++ +I    + G   +A  L   M+  GI P+
Sbjct: 468 MCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 527

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
              Y+ +  A    G     +Q++D +    +  D   Y  +I   C R     A + FA
Sbjct: 528 TIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFA 587

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            + + G   +   + IL +         +A+D+  +   R
Sbjct: 588 YMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 627



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 179/405 (44%), Gaps = 9/405 (2%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           L+  LC  G    A    R +     +     YNA I GYCR  ++  A  L + +    
Sbjct: 50  LIRSLCAAGRTADA---ARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP--- 103

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           + PN  T+  +V +LC +GL+ DA+  L E+     G A +  +   IL ++  + G   
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEM--PLRGCAATPPMCHVIL-EAACRGGGFR 160

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
            A+     +  K    D    N++++  C  G +        ++   G  PD+++YN +L
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
             LC   + D+       + + G  P+  ++ T+I  LC +G   +  E L  M E    
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCT 280

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P+  ++  IIDG  + G    A  I   M S+G+  NV  +N ++          +A  L
Sbjct: 281 PDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDL 340

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
             EM  +    D  T+N+L+   C  G +   ++L ++ML  G  PD+ITYT +I G C 
Sbjct: 341 LAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCK 400

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            G + EA  +   +   G   + I + I+ K   R +    A+++
Sbjct: 401 EGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQEL 445



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 133/271 (49%), Gaps = 3/271 (1%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
            C  G +   + L  +M++ G +PDV+T+  ++N  CK G +++A  +++ MS     PN
Sbjct: 363 FCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPN 422

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             +Y   + G CR      A  L S M   G  PN VT N L++ +CKKGL+  A++ L 
Sbjct: 423 TISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLK 482

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           ++L +     + D+I+ + ++D   K G   +AL L N M  K I  + + Y+ + +   
Sbjct: 483 QMLVNG---CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 539

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G        F  +       D   YN +++ LCK+ + D A  F+  +   G  P++ 
Sbjct: 540 REGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 599

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           +Y  +I+GL   G + +A++ L  +  +  V
Sbjct: 600 TYTILIRGLASEGLVREAQDLLSELCSRRAV 630



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 172/384 (44%), Gaps = 14/384 (3%)

Query: 85  AVFNALDLILKEN------LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
           A FN L   L  N       + L  M + G   CT   D R +  +I  +C  G    A 
Sbjct: 249 ATFNTLIAYLCRNGLFEQVHEALSQMPEHG---CT--PDLRMYATIIDGICKDGHHEVAN 303

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            +  +M   G  P+V+ +N ++  LC     E+A+ ++ EM +     +  T+N  +  +
Sbjct: 304 DILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFF 363

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           C+   +D+ + L   M  +G  P+ +T+  +++  CK+GL+ +AV  L  + A       
Sbjct: 364 CQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSA---CGCK 420

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            + I+ TI++    +      A  L + M Q+    + V +N LIN  C  G +  A   
Sbjct: 421 PNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIEL 480

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             QML  G  PD+I+Y+T+++ L K GK +EA     V+   G+ P+ I Y ++   L  
Sbjct: 481 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSR 540

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G   K  +   S+ + +V  +  ++N +I    +  +   A      M+S G   N  T
Sbjct: 541 EGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 600

Query: 439 FNALILAETRGGSIFDAFSLKKEM 462
           +  LI      G + +A  L  E+
Sbjct: 601 YTILIRGLASEGLVREAQDLLSEL 624


>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 567

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 195/401 (48%), Gaps = 4/401 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           +I  A +    +++ G  PDV+    L+ +LCK   ++KA  V+  M      P+ A+Y 
Sbjct: 77  RISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYT 136

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             +   C+   +  A+ L   M ++G   N VT+N LV  LC  G L  +++FL  ++  
Sbjct: 137 FLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQK 196

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                  +  T + L+++ +K     +A+ L +++  K  Q ++V+YNVL+ G C  G I
Sbjct: 197 G---LVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRI 253

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A   F  +  +GF P+V++YN LL  LC +G+ +EA+     ++    +P  ++Y  +
Sbjct: 254 EEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNIL 313

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I  L  HG I +A + +  M+     P    +N II    + G +    +  D M+    
Sbjct: 314 IGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRC 373

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           S N  TFNA+ +     G + +AFSL + +           Y  ++   C  G+ + A  
Sbjct: 374 SPNEGTFNAIAVL-CYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFL 432

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           L  EM + G TPD  TY+ LI+G C  G + EA E+F  ++
Sbjct: 433 LLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLE 473



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 201/424 (47%), Gaps = 4/424 (0%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           + C +  D   +  ++  LC  G +G A+ L  KM   G   + +T+N LV  LC  G+L
Sbjct: 124 ISCGIIPDAASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNL 183

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            K+   +  + +    PN  TY++ +    +   +++A+ L   +   G +PN V++N+L
Sbjct: 184 NKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVL 243

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LCK+G + +A++    + +      + +V++  IL+ S    G   +A  L  +M  
Sbjct: 244 LTGLCKEGRIEEAIRLFKNLPSKG---FSPNVVSYNILLRSLCYEGRWEEANELLAEMNG 300

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
           +     IV YN+LI     +G I  A     +M+   F P   +YN ++  LCK+GK++ 
Sbjct: 301 RERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEA 360

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
             +    +     +P++ ++  I   LC  G + +A   + S+  K        +  ++ 
Sbjct: 361 VVNCLDQMIFGRCSPNEGTFNAIAV-LCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVS 419

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
              + G+   AF +   M  +G + + +T+++LI      G +++A  + K +  D   P
Sbjct: 420 CLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRP 479

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D+  +N LI   C      L+L++++ M+ +G TP   TYT L++G       + A EV 
Sbjct: 480 DIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVL 539

Query: 530 AKIQ 533
            ++ 
Sbjct: 540 RELH 543



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/317 (21%), Positives = 142/317 (44%), Gaps = 31/317 (9%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  LC  G+I  A+ L + +  KG  P+V+++N L+  LC  G  E+A+ ++ EM+   
Sbjct: 243 LLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRE 302

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP+  TYN  I       ++++AL +   M     +P   ++N ++  LCK+G +   V
Sbjct: 303 RSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVV 362

Query: 244 KFLGEVL----ADDDGKATSDVI--------------------TSTILMDSY-------F 272
             L +++    + ++G   +  +                     ++ + D Y        
Sbjct: 363 NCLDQMIFGRCSPNEGTFNAIAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLC 422

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
           K G+ + A  L  +M +     D   Y+ LI G C+ G +  A   F  + +  + PD+ 
Sbjct: 423 KKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDID 482

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            +N L+   CK  + D +   + ++ + G  P + +Y  +++G+    +   A E L  +
Sbjct: 483 NFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLREL 542

Query: 393 LEKSVVPEPHIWNVIID 409
             + V+ +  +  +I+ 
Sbjct: 543 HLRQVMSQSTVERLIMQ 559



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 35/236 (14%)

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           IS AF +   ++K G  PDV+    LL  LCK  K+ +A     ++   G+ PD  SY  
Sbjct: 78  ISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYTF 137

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++  LC                                   + G++  A  + + M   G
Sbjct: 138 LVNHLC-----------------------------------KRGNVGYAMQLVEKMEDSG 162

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
             +N  T+N L+      G++  +      ++  G+ P+ FTY+ L+ A+     ++ A+
Sbjct: 163 YPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAM 222

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +L DE++ +G  P++++Y  L+ G C  G ++EA  +F  + + G + + + + IL
Sbjct: 223 RLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNIL 278



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 50/102 (49%)

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           R   I DAF   + ++ +G  PDV     L+   C    +  A+++ + M+  GI PD  
Sbjct: 74  RDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAA 133

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           +YT L+   C RGN+  A ++  K++  G   + + +  L K
Sbjct: 134 SYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVK 175


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 217/485 (44%), Gaps = 44/485 (9%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVP--DVLTHNY----LVNELCKIGDLEKADHVIREMSE 181
           L   GK+  A  L  KM+++G     D++  NY    +V  LC +G +E+   +I +   
Sbjct: 174 LVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWG 233

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               PN   YN  I GYC+  +L +A  +F  +   G  P   T+  L+   CK G    
Sbjct: 234 NGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQV 293

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
             + L E+   +      +V     ++D+ +K G   +A  +   M +   + DI  YN+
Sbjct: 294 VDQLLNEM---NVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNI 350

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LIN  C  G I  A  +  +  +R  LP+  +Y  L++  CKQG    AS     +++TG
Sbjct: 351 LINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETG 410

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI-------------- 407
             PD +SY   I G    G+I  A      M+EK V P+  I+NV+              
Sbjct: 411 DKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAK 470

Query: 408 ---------------------IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
                                +DG+ R  +L  A  + ++++S G+   V  +N +I   
Sbjct: 471 LLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGL 530

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G + DA S   +M +    PD +T++ +I        +  AL+++ +M+++   P++
Sbjct: 531 CKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNV 590

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           + YT LI G C   +M  AE+VF  +Q+  L  + + + IL   + +  + +KA    + 
Sbjct: 591 VAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFEL 650

Query: 567 WLLRN 571
            L+ N
Sbjct: 651 MLMNN 655



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 202/444 (45%), Gaps = 23/444 (5%)

Query: 102 KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           + MR    + C  E D   +  +I   C GG+I  A     +  ++  +P+  ++  L++
Sbjct: 331 EMMRMMTEMGC--EPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMH 388

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP 221
             CK GD   A  ++ +++E    P+  +Y AFI G     E+D AL +   M   G+ P
Sbjct: 389 AYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFP 448

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           +   +N+L+  LCKKG    A   L E+L   D     D      L+D + +N +  +A 
Sbjct: 449 DAQIYNVLMSGLCKKGRFPAAKLLLSEML---DLNLQPDAYMYATLVDGFIRNNELDKAT 505

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            L+  +  K I   +V YNV+I G C  G ++ A +Y  +M      PD  T++T+++  
Sbjct: 506 ELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGY 565

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
            KQ  LD A   +G + K    P+ ++Y ++I G C   D+ +A +   +M   ++ P  
Sbjct: 566 VKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNV 625

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA---------------E 446
             + ++I G+ + G    A S  +LML      N  TF+ LI                 E
Sbjct: 626 VTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEE 685

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
                I D F+    M+ +G    + TYN +I   C  G +  A  L  +MLR+G   D 
Sbjct: 686 NDRSLILDFFA---TMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDS 742

Query: 507 ITYTELIKGHCARGNMKEAEEVFA 530
           + ++ L+ G C  G  KE   + +
Sbjct: 743 VCFSALLHGLCQTGKSKEWRNIIS 766



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 199/444 (44%), Gaps = 15/444 (3%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  A  + R M + G  PD+ T+N L+N  C  G +++A+  +    E    PN  +Y
Sbjct: 324 GLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSY 383

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              +  YC+  +   A  +   +A  G +P+ V++   +H     G +  A+    +++ 
Sbjct: 384 TPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMM- 442

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             +     D     +LM    K G    A  L ++M   N+Q D   Y  L++GF  N +
Sbjct: 443 --EKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNE 500

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  A   F  ++ +G  P V+ YN ++  LCK GK+ +A  +   +     APD+ ++ T
Sbjct: 501 LDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHST 560

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G     D+  A +    M+++   P    +  +I+G+ +  D+S A  +   M SF 
Sbjct: 561 VIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFN 620

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  NV T+  LI   ++ G    A S  + ML++   P+  T++ LI    N+ +  L +
Sbjct: 621 LEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLI 680

Query: 492 QLYDE------------MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
           +  +E            M+  G +  I TY  +I   C  G +  A+ +  K+   G  +
Sbjct: 681 EKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLM 740

Query: 540 DHIPFRILKKRYRRMKESDKARDI 563
           D + F  L     +  +S + R+I
Sbjct: 741 DSVCFSALLHGLCQTGKSKEWRNI 764



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 144/346 (41%), Gaps = 27/346 (7%)

Query: 87  FNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQ 146
           F A  L+L E LD              L+ D   +  ++       ++  A  L   ++ 
Sbjct: 466 FPAAKLLLSEMLD------------LNLQPDAYMYATLVDGFIRNNELDKATELFEVVMS 513

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           KG  P V+ +N ++  LCK G +  A   + +M     +P+  T++  I GY + ++LD 
Sbjct: 514 KGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDS 573

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           AL +F  M     +PN V +  L++  CK   +  A K      A        +V+T TI
Sbjct: 574 ALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFR---AMQSFNLEPNVVTYTI 630

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC------------LNGDISS 314
           L+  + K G   +A + +  M   N   +   ++ LING                 D S 
Sbjct: 631 LIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSL 690

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
              +F  M+  G+   + TYN+++ CLCK G +D A      + + G   D + +  ++ 
Sbjct: 691 ILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLH 750

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GLC  G   + R  +   L K        +++ +D Y   G  S A
Sbjct: 751 GLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYDGKPSEA 796



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 134/303 (44%), Gaps = 46/303 (15%)

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF---CQMLKRGFLPDVITYNTLLNCLC 342
           DM  +N +  + A N +I  +   G +  A   F   C++      P V+  N+LLNCL 
Sbjct: 118 DMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELY--NCFPCVVANNSLLNCLV 175

Query: 343 KQGKLDEASHFYGVLSKTG------VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           K GK+D A   Y  + + G      +  D  S   +++GLC  G + + R+ +       
Sbjct: 176 KNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNG 235

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNA-------------------------------FSIRD 425
            VP    +NVIIDGY + GDL  A                               F + D
Sbjct: 236 CVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVD 295

Query: 426 LMLS----FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +L+     G++ NV  FN++I A+ + G +  A  + + M   G  PD+ TYN+LI  S
Sbjct: 296 QLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFS 355

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C+ G I  A +  +    R + P+  +YT L+  +C +G+   A ++  KI   G   D 
Sbjct: 356 CSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDL 415

Query: 542 IPF 544
           + +
Sbjct: 416 VSY 418


>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Brachypodium distachyon]
          Length = 721

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 207/405 (51%), Gaps = 10/405 (2%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G++  AL    +M + G  PDV+T+N L+  LC +  + +A  +I  M +    P+  +Y
Sbjct: 210 GRVDKALGFADRMRRVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISY 269

Query: 192 NAFITGYCRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
              ++  C+   + +   L +TM N+ G+  ++VT+N+L+H L K G   +A++FL E  
Sbjct: 270 YTVMSFLCKEKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRE-- 327

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             +  +   D +  + ++ S+  NG   +A  +  +M  K    D+V Y+ +++GFC  G
Sbjct: 328 -SEGKRFRVDEVGYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIG 386

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV---APDQI 367
           +I  A      M K G  P+++T+  LLN LCK GK  EA   + +L+K+G     P  I
Sbjct: 387 EIDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEA---WELLNKSGEDWWTPSDI 443

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y  ++ G    G + ++ + +  ML+K   P     N++I    + G  + A    +  
Sbjct: 444 TYSVVMHGFRREGKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQC 503

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
            S G + NV  F  +I   +R G +  A SL  ++ L    PDV TY +++ A    G +
Sbjct: 504 QSKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRL 563

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
             A  L ++ML RG+ P ++TY  +I  +C +G ++E  ++  K+
Sbjct: 564 KEATGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEELVDLLDKM 608



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 171/349 (48%), Gaps = 5/349 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AV+   CL G++  A  +  +MI K   PDV+T++ +V+  C+IG++++A  +++ M + 
Sbjct: 342 AVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKN 401

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  T+ A + G C+V +  +A  L +    +   P+ +T+++++H   ++G L ++
Sbjct: 402 GCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKES 461

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              + ++L       T ++    +L+ +  K G   +A         K    ++V +  +
Sbjct: 462 CDVVAQMLQKGFFPTTVEI---NLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTV 518

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GF   GD+ SA +    +      PDV+TY  ++N L ++G+L EA+     +   G+
Sbjct: 519 IHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGL 578

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  ++Y+T+I   C  G + +  + L  ML +  +    ++N +I+     G L+ A+ 
Sbjct: 579 VPTLVTYRTVIHRYCEKGTVEELVDLLDKMLARQELKS--VYNQVIEKLCAFGKLNEAYG 636

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
           +   +L      +  T + L+ +    G    A+++   M    + PD+
Sbjct: 637 LLSKVLRTASQRDAQTCHILMESFLNRGLTIQAYNVACRMFQRNLIPDL 685



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 190/410 (46%), Gaps = 17/410 (4%)

Query: 101 LKTMR-DTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYL 159
           L TMR D G     L TD   +  +I  L   G    AL   R+   K    D + ++ +
Sbjct: 289 LATMRNDAG-----LLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAV 343

Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
           V+  C  G + +A  ++ EM      P+  TY+A + G+CR+ E+D+A  +   M  NG 
Sbjct: 344 VHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGC 403

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
           +PN VTH  L++ LCK G   +A + L +  + +D    SD IT +++M  + + G   +
Sbjct: 404 KPNIVTHTALLNGLCKVGKSSEAWELLNK--SGEDWWTPSD-ITYSVVMHGFRREGKLKE 460

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           +  +   M QK      V  N+LI+  C  G  + A  +  Q   +G   +V+ + T+++
Sbjct: 461 SCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIH 520

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
              +QG L+ A      L  +   PD ++Y  ++  L   G + +A   +  ML + +VP
Sbjct: 521 GFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVP 580

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
               +  +I  Y   G +     + D ML+     +V  +N +I      G + +A+ L 
Sbjct: 581 TLVTYRTVIHRYCEKGTVEELVDLLDKMLARQELKSV--YNQVIEKLCAFGKLNEAYGLL 638

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD---EMLRRGITPDI 506
            ++L      D  T ++L+ +  N G   L +Q Y+    M +R + PD+
Sbjct: 639 SKVLRTASQRDAQTCHILMESFLNRG---LTIQAYNVACRMFQRNLIPDL 685



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 138/297 (46%), Gaps = 8/297 (2%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           LM SY + G    A+ +   M       DI   NV +N   + G +  A  +  +M + G
Sbjct: 167 LMLSYSRAGKLRSAMRVLQLMQTDGCAPDISICNVAVNVLVVAGRVDKALGFADRMRRVG 226

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             PDV+TYN L+  LC   ++ EA    GV+ K G  PD+ISY T++  LC    + + R
Sbjct: 227 VEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEVR 286

Query: 387 EFLLSML-EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV--FTFNALI 443
             L +M  +  ++ +   +N++I    + G    A     L  S G    V    ++A++
Sbjct: 287 SLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEF--LRESEGKRFRVDEVGYSAVV 344

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            +    G + +A  +  EM+     PDV TY+ ++   C +G I  A ++   M + G  
Sbjct: 345 HSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCK 404

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR---MKES 557
           P+I+T+T L+ G C  G   EA E+  K          I + ++   +RR   +KES
Sbjct: 405 PNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKES 461



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 1/164 (0%)

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           AR  +  M+ + V   P  +  ++  Y R G L +A  +  LM + G + ++   N  + 
Sbjct: 145 ARRVVRLMIRRGVRRGPRQFAHLMLSYSRAGKLRSAMRVLQLMQTDGCAPDISICNVAVN 204

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
                G +  A      M   G+ PDV TYN LI   C++  +  AL++   ML+ G  P
Sbjct: 205 VLVVAGRVDKALGFADRMRRVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPP 264

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQT-LGLAIDHIPFRIL 547
           D I+Y  ++   C    + E   + A ++   GL  D + + +L
Sbjct: 265 DKISYYTVMSFLCKEKRVSEVRSLLATMRNDAGLLTDQVTYNML 308



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 66/144 (45%)

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
           P +++ ++    R      A  +  LM+  GV      F  L+L+ +R G +  A  + +
Sbjct: 126 PEVFDEMLGLLSRTRLHDPARRVVRLMIRRGVRRGPRQFAHLMLSYSRAGKLRSAMRVLQ 185

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
            M  DG  PD+   N+ +      G +  AL   D M R G+ PD++TY  LIKG C+  
Sbjct: 186 LMQTDGCAPDISICNVAVNVLVVAGRVDKALGFADRMRRVGVEPDVVTYNCLIKGLCSVR 245

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPF 544
            + EA E+   +   G   D I +
Sbjct: 246 RVVEALEMIGVMLKNGCPPDKISY 269



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/294 (21%), Positives = 107/294 (36%), Gaps = 41/294 (13%)

Query: 309 NGDISSAFAYFC---QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            GD  +AF +F    +  +    P+V  ++ +L  L +    D A     ++ + GV   
Sbjct: 103 QGDARAAFEFFRWADRQWQYRHAPEV--FDEMLGLLSRTRLHDPARRVVRLMIRRGVRRG 160

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
              +  ++      G +  A   L  M      P+  I NV ++     G +  A    D
Sbjct: 161 PRQFAHLMLSYSRAGKLRSAMRVLQLMQTDGCAPDISICNVAVNVLVVAGRVDKALGFAD 220

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF------------- 472
            M   GV  +V T+N LI        + +A  +   ML +G  PD               
Sbjct: 221 RMRRVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCKEK 280

Query: 473 -----------------------TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
                                  TYN+LI      GH   AL+   E   +    D + Y
Sbjct: 281 RVSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGY 340

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           + ++   C  G M EA+E+  ++ +     D + +  +   + R+ E D+AR +
Sbjct: 341 SAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKM 394


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 217/452 (48%), Gaps = 20/452 (4%)

Query: 89  ALDLILKENLDRL-----KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRK 143
            LD +L +NL ++       M+  G     LE +   +  +++ LC  GK+  A  L  +
Sbjct: 150 VLDALLSQNLFKMINALYNNMKSEG-----LEPNVFTYNVLLKALCQNGKVDGACKLLVE 204

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M  KG  PD +++  +++ +CK+GD++KA    RE++ M+  P    YNA I G C+   
Sbjct: 205 MSNKGCDPDDVSYTTVISSMCKLGDVDKA----RELA-MKFEPVVPVYNALIHGVCKECR 259

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
             +A  L + M + G+ PN ++++ ++  L   G +  ++   G +          +V T
Sbjct: 260 FKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRG---CRPNVQT 316

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            T L+  +F  G    A+ LWN M ++ +  ++VAYN LI+G C +G++  A + + QM 
Sbjct: 317 FTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQME 376

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           K    P+V TY+T++    K G L  A   +  +   G  P+ + Y  ++  LC      
Sbjct: 377 KDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFD 436

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A + + +M+     P    +N  I G  R G +  A ++ D M  +    N+ T+N L+
Sbjct: 437 QAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELL 496

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN-LLIGASCNLGHIHLALQLYDEMLRRGI 502
               R  +  +A  L +E+    +  D  TYN ++ G S N  H  + LQL  +ML  GI
Sbjct: 497 DGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQV-LQLLGKMLVNGI 555

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
             D IT    +  +C  G +K A +V   I  
Sbjct: 556 KLDTITVNTTVNAYCKLGKVKTAIKVLDNISA 587



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 195/421 (46%), Gaps = 8/421 (1%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L   M  +G  P+V T+N L+  LC+ G ++ A  ++ EMS     P+  +Y   I+  C
Sbjct: 166 LYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMC 225

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           ++ ++DKA  L   M    + P    +N L+H +CK+    +A   + E++   D     
Sbjct: 226 KLGDVDKAREL--AMKFEPVVP---VYNALIHGVCKECRFKEAFDLMNEMV---DRGVDP 277

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +VI+ + ++      G+   +LA++  MF +  + ++  +  LI GF + G +  A   +
Sbjct: 278 NVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLW 337

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M++ G  P+V+ YNTL++ LC  G +DEA   +  + K  + P+  +Y TII G    
Sbjct: 338 NLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKS 397

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           GD+V A E    M+     P   ++  ++D   +      AF + D M+S G    V TF
Sbjct: 398 GDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITF 457

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           N  I    R G +  A ++  +M      P++ TYN L+           A  L  E+  
Sbjct: 458 NNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEE 517

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
           R +  D +TY  ++ G    G  ++  ++  K+   G+ +D I        Y ++ +   
Sbjct: 518 RKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKT 577

Query: 560 A 560
           A
Sbjct: 578 A 578



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 197/416 (47%), Gaps = 10/416 (2%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+ G  ++ R +  + G  P V  +N +++ L      +  + +   M      PN  TY
Sbjct: 125 GEQGLKMFYRIR--EFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTY 182

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  +   C+  ++D A  L   M+N G  P+ V++  ++ ++CK   LGD  K     + 
Sbjct: 183 NVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCK---LGDVDKARELAMK 239

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
            +      + +   +  +  FK     +A  L N+M  + +  ++++Y+ +I+     G+
Sbjct: 240 FEPVVPVYNALIHGVCKECRFK-----EAFDLMNEMVDRGVDPNVISYSTVISCLSDMGN 294

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +  + A F +M  RG  P+V T+ +L+     +G++ +A   + ++ + GV+P+ ++Y T
Sbjct: 295 VELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNT 354

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I GLC  G++ +A      M + S+ P    ++ II G+ + GDL +A    + M++ G
Sbjct: 355 LIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCG 414

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
              NV  +  ++    +      AF L   M+ DG  P V T+N  I   C  G +  A+
Sbjct: 415 CRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAM 474

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            + D+M +    P+I TY EL+ G       +EA  +  +++   +  D + +  +
Sbjct: 475 NVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTI 530



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 171/376 (45%), Gaps = 12/376 (3%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           TY   I    R NE+D   +L   M    +  ++     ++    +  L    +K    +
Sbjct: 76  TYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRI 135

Query: 250 --LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
                +      +++   +L  + FK  +     AL+N+M  + ++ ++  YNVL+   C
Sbjct: 136 REFGCEPSVKIYNLVLDALLSQNLFKMIN-----ALYNNMKSEGLEPNVFTYNVLLKALC 190

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            NG +  A     +M  +G  PD ++Y T+++ +CK G +D+A      +    V P   
Sbjct: 191 QNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKAREL--AMKFEPVVP--- 245

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            Y  +I G+C      +A + +  M+++ V P    ++ +I      G++  + ++   M
Sbjct: 246 VYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRM 305

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              G   NV TF +LI      G + DA  L   M+ +G+ P+V  YN LI   C+ G++
Sbjct: 306 FVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNM 365

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A+ ++++M +  I P++ TY+ +I G    G++  A E + K+   G   + + +  +
Sbjct: 366 DEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCM 425

Query: 548 KKRYRRMKESDKARDI 563
                +M   D+A D+
Sbjct: 426 VDVLCQMSMFDQAFDL 441



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 4/230 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           + C    +   +  ++  LC       A  L   MI  G  P V+T N  +  LC+ G +
Sbjct: 411 INCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRV 470

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E A +V+ +M +    PN  TYN  + G  R N   +A  L   +    +  + VT+N +
Sbjct: 471 EWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTI 530

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM-F 288
           ++     G+    ++ LG++L +       D IT    +++Y K G    A+ + +++  
Sbjct: 531 MYGFSFNGMHQQVLQLLGKMLVNG---IKLDTITVNTTVNAYCKLGKVKTAIKVLDNISA 587

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +K  + DI+ + +++ G C       A  Y  +MLKRG  P++ T+N L+
Sbjct: 588 EKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLV 637



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 97/182 (53%), Gaps = 2/182 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           I+ LC  G++  A+ +  +M +   +P++ T+N L++ L +     +A  +IRE+ E + 
Sbjct: 461 IKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKV 520

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
             +C TYN  + G+       + L L   M  NGI+ + +T N  V+A CK G +  A+K
Sbjct: 521 EFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIK 580

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L  + A+ + +A  D+IT TI++          +A+   ++M ++ I  +I  +NVL+ 
Sbjct: 581 VLDNISAEKEFRA--DIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVR 638

Query: 305 GF 306
           GF
Sbjct: 639 GF 640



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 83/202 (41%), Gaps = 1/202 (0%)

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI-WNVIIDGYGRCGDLSNAFSIRD 425
           +S   +++ L    DIV + E+  S+         H+ +  +ID  GR  ++     +  
Sbjct: 39  VSESHVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQ 98

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M    V  +   F  +I    R         +   +   G  P V  YNL++ A  +  
Sbjct: 99  QMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQN 158

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
              +   LY+ M   G+ P++ TY  L+K  C  G +  A ++  ++   G   D + + 
Sbjct: 159 LFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYT 218

Query: 546 ILKKRYRRMKESDKARDIHQKW 567
            +     ++ + DKAR++  K+
Sbjct: 219 TVISSMCKLGDVDKARELAMKF 240


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 182/394 (46%), Gaps = 2/394 (0%)

Query: 132  GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
            GKI  A      MIQ+G +PD  T   ++  LC+ G + +A    R+M ++   PN   +
Sbjct: 832  GKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINF 891

Query: 192  NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
             + I G C+   + +A  +   M  NG +PN  TH  L+  LCK+G    A +   +++ 
Sbjct: 892  TSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR 951

Query: 252  DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
             D  K   +V T T ++  Y K     +A  L++ M ++ +  ++  Y  LING C  G 
Sbjct: 952  SDTYKP--NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 1009

Query: 312  ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
               A+     M   GF+P++ TYN  ++ LCK+ +  EA          G+  D ++Y  
Sbjct: 1010 FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTI 1069

Query: 372  IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
            +IQ  C   DI +A  F   M +     +  + N++I  + R   +  +  +  L++S G
Sbjct: 1070 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 1129

Query: 432  VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
            +     T+ ++I    + G I  A      M   G  PD FTY  LI   C    +  A 
Sbjct: 1130 LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEAC 1189

Query: 492  QLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            +LY+ M+ RG++P  +T   L   +C R +   A
Sbjct: 1190 KLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANA 1223



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/422 (23%), Positives = 200/422 (47%), Gaps = 4/422 (0%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
            ++R+    G++  A+ +   M  +G  P  +T N ++    ++G +E A++V  EMS   
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 184  PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              P+ ++Y   + G  R  ++ +A    + M   G  P+  T  +++ ALC+ GL+  A+
Sbjct: 814  VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873

Query: 244  KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             +  +++   D     ++I  T L+D   K G   QA  +  +M +   + ++  +  LI
Sbjct: 874  WYFRKMI---DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 930

Query: 304  NGFCLNGDISSAFAYFCQMLKRG-FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
            +G C  G    AF  F ++++   + P+V TY +++   CK+ KL+ A   +  + + G+
Sbjct: 931  DGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 990

Query: 363  APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             P+  +Y T+I G C  G   +A E +  M ++  +P  + +N  ID   +      A+ 
Sbjct: 991  FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYE 1050

Query: 423  IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
            + +   S G+ ++  T+  LI  + +   I  A +    M   G   D+   N+LI A C
Sbjct: 1051 LLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFC 1110

Query: 483  NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
                +  + +L+  ++  G+ P   TYT +I  +C  G++  A + F  ++  G   D  
Sbjct: 1111 RQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSF 1170

Query: 543  PF 544
             +
Sbjct: 1171 TY 1172



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 190/423 (44%), Gaps = 46/423 (10%)

Query: 124  VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM--SE 181
            ++  LC  G +  A+W  RKMI  G  P+++    L++ LCK G +++A  ++ EM  + 
Sbjct: 859  ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 918

Query: 182  MRPS----------------------------------PNCATYNAFITGYCRVNELDKA 207
             +P+                                  PN  TY + I GYC+ ++L++A
Sbjct: 919  WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 978

Query: 208  LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
              LFS M   G+ PN  T+  L++  CK G  G A + +   L  D+G    ++ T    
Sbjct: 979  EMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMN--LMGDEG-FMPNIYTYNAA 1035

Query: 268  MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
            +DS  K     +A  L N  F   ++ D V Y +LI   C   DI+ A A+FC+M K GF
Sbjct: 1036 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGF 1095

Query: 328  LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
              D+   N L+   C+Q K+ E+   + ++   G+ P + +Y ++I   C  GDI  A +
Sbjct: 1096 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 1155

Query: 388  FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            +  +M     VP+   +  +I G  +   +  A  + + M+  G+S    T   L     
Sbjct: 1156 YFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC 1215

Query: 448  RGGSIFDAFSLKKEMLLDGIFPDVF--TYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
            +     +A      +LL+ +   ++  T   L+   C+   + +A   + ++L +  + D
Sbjct: 1216 KRNDSANAM-----ILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSAD 1270

Query: 506  IIT 508
             +T
Sbjct: 1271 RVT 1273



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 176/411 (42%), Gaps = 62/411 (15%)

Query: 158  YLV--NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
            YLV  + L   G+L+KA  V+R M               +  +  +  L++A+ +   M 
Sbjct: 731  YLVTADSLLANGNLQKAHEVMRCM---------------LRNFSEIGRLNEAVGMVMDMQ 775

Query: 216  NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
            N G+ P+ +T N ++    + GL+                               Y +N 
Sbjct: 776  NQGLTPSSITMNCVLEIAVELGLI------------------------------EYAEN- 804

Query: 276  DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
                   ++++M  + +  D  +Y +++ G   +G I  A  +   M++RGF+PD  T  
Sbjct: 805  -------VFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCT 857

Query: 336  TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
             +L  LC+ G ++ A  ++  +   G  P+ I++ ++I GLC  G I +A E L  M+  
Sbjct: 858  LILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN 917

Query: 396  SVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
               P  +    +IDG  + G    AF +   L+ S     NV T+ ++I    +   +  
Sbjct: 918  GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 977

Query: 455  AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
            A  L   M   G+FP+V TY  LI   C  G    A +L + M   G  P+I TY   I 
Sbjct: 978  AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 1037

Query: 515  GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
              C +    EA E+  K  + GL  D + + IL      ++E  K  DI+Q
Sbjct: 1038 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL------IQEQCKQNDINQ 1082



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 135/285 (47%), Gaps = 4/285 (1%)

Query: 113  TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
            T + +   + ++I   C   K+  A  L  +M ++G  P+V T+  L+N  CK G   +A
Sbjct: 954  TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 1013

Query: 173  DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
              ++  M +    PN  TYNA I   C+ +   +A  L +   + G+  + VT+ IL+  
Sbjct: 1014 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 1073

Query: 233  LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
             CK+  +  A+ F   +   +     +D+  + IL+ ++ +     ++  L+  +    +
Sbjct: 1074 QCKQNDINQALAFFCRM---NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 1130

Query: 293  QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
                  Y  +I+ +C  GDI  A  YF  M + G +PD  TY +L++ LCK+  +DEA  
Sbjct: 1131 IPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK 1190

Query: 353  FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
             Y  +   G++P +++  T+    C   D   A   LL  L+K +
Sbjct: 1191 LYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM-ILLEPLDKKL 1234



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 6/235 (2%)

Query: 112  CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
            C LE D   +  +I++ C    I  AL    +M + G   D+  +N L+   C+   +++
Sbjct: 1058 CGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKE 1117

Query: 172  ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
            ++ + + +  +   P   TY + I+ YC+  ++D AL  F  M  +G  P+  T+  L+ 
Sbjct: 1118 SERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 1177

Query: 232  ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
             LCKK ++ +A K    ++  D G +  +V T   L   Y K  D   A+ L   + +K 
Sbjct: 1178 GLCKKSMVDEACKLYEAMI--DRGLSPPEV-TRVTLAYEYCKRNDSANAMILLEPLDKK- 1233

Query: 292  IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
                I     L+   C    +  A  +F ++L++    D +T         + GK
Sbjct: 1234 --LWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGK 1286


>gi|414878622|tpg|DAA55753.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
          Length = 573

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 238/520 (45%), Gaps = 90/520 (17%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI  LC   K+  A  +     + G+ PD+ +++YL++  CK+G+LEKA + + +M    
Sbjct: 57  VIDGLCKEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHG 116

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              NC      +    ++  + + +  F    + G+  + V +NI + A CK G + +AV
Sbjct: 117 IEINCYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAV 176

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL- 302
           K L E++A   G    D I  T L++ Y   G+   A  ++ +M + NI+ D+V YN+L 
Sbjct: 177 KLLNEMMA---GSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILA 233

Query: 303 ----------------------------------INGFCLNGDISSA------------- 315
                                             I GFC  G++S A             
Sbjct: 234 SGYSRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGID 293

Query: 316 ----------------------FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
                                 +  F ++ K+G + D ++ + L+N LC+  K+ EAS  
Sbjct: 294 NINVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTV 353

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             ++ +  V PD ISY  +I   C   D+  AR +   M+E+ +  +  ++ V+++GY +
Sbjct: 354 CKMMLEKNVVPDVISYSKLISAYCQTRDMHNARLWFHDMVERGL-SDVIVYTVLMNGYCK 412

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALI---LAET--RGGSIFDA------FSLKKEM 462
            G L  A  +   M++ G+  +V  +  L+   L ET  +G               K ++
Sbjct: 413 VGRLQEACELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKV 472

Query: 463 LLDG-----IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           LL+      I PDV  Y +LI   C   ++  A  L+DEML +G+ PD+ TYT LI G+C
Sbjct: 473 LLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALINGYC 532

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
           ++G + +AE++F ++   G+  D + F +L KR  R +++
Sbjct: 533 SQGEIAKAEDLFQEMIAKGMKPDVLSFSVLHKRTLRHEKA 572



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 177/381 (46%), Gaps = 20/381 (5%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           +L  D   +  +I   CL G+   A  +  +M++    PDV+T+N L +   + G + K 
Sbjct: 186 SLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNGLVMKV 245

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             ++  M +    PN  TY   I G+CR   L +A  LF+ +   GI    V +  +V  
Sbjct: 246 FDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYGSMVCG 305

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
               G    A      V    +     D ++ + L++   ++    +A  +   M +KN+
Sbjct: 306 YLHSGWTDHAYMLFLRVAKQGN---MVDRLSCSKLINGLCRDEKVGEASTVCKMMLEKNV 362

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D+++Y+ LI+ +C   D+ +A  +F  M++RG L DVI Y  L+N  CK G+L EA  
Sbjct: 363 VPDVISYSKLISAYCQTRDMHNARLWFHDMVERG-LSDVIVYTVLMNGYCKVGRLQEACE 421

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLC-------IHGDIVKAREFLL---------SMLEKS 396
            +  +   G+ PD ++Y  ++ G           G   + R F L         SM +  
Sbjct: 422 LFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLNSMKDME 481

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           + P+   + V+IDG  +   L  A  + D ML+ G+  +V T+ ALI      G I  A 
Sbjct: 482 IEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALINGYCSQGEIAKAE 541

Query: 457 SLKKEMLLDGIFPDVFTYNLL 477
            L +EM+  G+ PDV ++++L
Sbjct: 542 DLFQEMIAKGMKPDVLSFSVL 562



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/426 (22%), Positives = 194/426 (45%), Gaps = 10/426 (2%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIR------EMSEMRPSPNCATYNAFITG 197
           MI+ G   DV   +  +  LC  G  + A +++R      E+S+ R       YN  I G
Sbjct: 1   MIEMGVKLDVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDG 60

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
            C+  +L +A  +      +G  P+  +++ L+H+ CK G L  A   + ++++   G  
Sbjct: 61  LCKEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSH--GIE 118

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
            +  I +  L+    K G   + +  +       +  D V YN+ ++ +C  G+++ A  
Sbjct: 119 INCYIVAY-LLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVK 177

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
              +M+    +PD I Y  L+N  C +G+ + A   +  + K  + PD ++Y  +  G  
Sbjct: 178 LLNEMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYS 237

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
            +G ++K  + L  M+++ + P    + + I G+ R G+LS A  + +++   G+ +   
Sbjct: 238 RNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINV 297

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            + +++      G    A+ L   +   G   D  + + LI   C    +  A  +   M
Sbjct: 298 LYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMM 357

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
           L + + PD+I+Y++LI  +C   +M  A   F  +   GL+ D I + +L   Y ++   
Sbjct: 358 LEKNVVPDVISYSKLISAYCQTRDMHNARLWFHDMVERGLS-DVIVYTVLMNGYCKVGRL 416

Query: 558 DKARDI 563
            +A ++
Sbjct: 417 QEACEL 422



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/219 (21%), Positives = 99/219 (45%), Gaps = 6/219 (2%)

Query: 359 KTGVAPDQISYKTIIQGLCIHG------DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
           + GV  D   + + I GLC  G      ++V+    L  + ++ V  E   +N++IDG  
Sbjct: 3   EMGVKLDVHGFSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDGLC 62

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           +   L  A  + ++    G + ++++++ LI +  + G++  A+   ++M+  GI  + +
Sbjct: 63  KEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEINCY 122

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
               L+     LG +   +  + +    G+  D + Y   +  +C  GNM EA ++  ++
Sbjct: 123 IVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLNEM 182

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
               L  D I +  L   Y    E++ A  + ++ L  N
Sbjct: 183 MAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKAN 221


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 179/406 (44%), Gaps = 2/406 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D R   A++   C  G+   A  L   M ++G   D  T   +V   C+ G      
Sbjct: 177 VRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVP 236

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M EM   PN   Y A++ G C+   + +A H+   M   G++PN  TH  L+  L
Sbjct: 237 GLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGL 296

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G    A +   +++     K   +V T T+++  Y K G   +A  L   M ++ + 
Sbjct: 297 CKIGWTERAFRLFLKLVKSSSYK--PNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLA 354

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +   Y  LI+G C  G    AF    +M   GFLP++ TYN ++   CK+GK+ +A   
Sbjct: 355 PNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKV 414

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
             + +  G+ PD+++Y  +I   C  G I  A +    M E S  P+   +  II  Y +
Sbjct: 415 LRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQ 474

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
              +  +  + D  LS G+     T+ ++I    R G    A  + + M+  G  PD  T
Sbjct: 475 QRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPIT 534

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
           Y  LI   C    +  A  L++ ML + + P  +T   L   +C R
Sbjct: 535 YGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRR 580



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 182/396 (45%), Gaps = 4/396 (1%)

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           H  +    M   P+  ++ A + G C+    ++A  L + M   G   +  T  ++V A 
Sbjct: 167 HARQAFDGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAF 226

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C++G   D     G ++   +     +V+  T  +D   K G   QA  +  +M  K ++
Sbjct: 227 CRQGRFRDVPGLFGRMVEMGN---PPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLK 283

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG-FLPDVITYNTLLNCLCKQGKLDEASH 352
            ++  +  LI+G C  G    AF  F +++K   + P+V TY  ++   CK+GKL  A  
Sbjct: 284 PNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEM 343

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
             G + + G+AP+  +Y T+I G C  G   +A E +  M  +  +P  + +N II G+ 
Sbjct: 344 LLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFC 403

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           + G +  A+ +  +  S G+  +  T+  LI    + G I  A  L  +M  +   PD+ 
Sbjct: 404 KKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDID 463

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY  +I   C    +  + QL+D+ L  G+ P   TYT +I G+C  G    A +VF ++
Sbjct: 464 TYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERM 523

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
              G   D I +  L     +    ++AR + +  L
Sbjct: 524 VQHGCLPDPITYGALISGLCKESRLEEARALFETML 559



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 175/378 (46%), Gaps = 4/378 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+R  C  G+      L  +M++ G  P+V+ +   V+ LCK G +++A HV+ EM    
Sbjct: 222 VVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKG 281

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLF-STMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             PN  T+ + I G C++   ++A  LF   + ++  +PN  T+ +++   CK+G L  A
Sbjct: 282 LKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARA 341

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              LG ++       T+   T T L+D + + G   +A  L N M  +    +I  YN +
Sbjct: 342 EMLLGRMVEQGLAPNTN---TYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAI 398

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I GFC  G I  A+        +G  PD +TY  L+   CKQG +  A   +  +++   
Sbjct: 399 IGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSC 458

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  +Y TII   C    + ++++     L   +VP    +  +I GY R G  ++A  
Sbjct: 459 HPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALK 518

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M+  G   +  T+ ALI    +   + +A +L + ML   + P   T   L    C
Sbjct: 519 VFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYC 578

Query: 483 NLGHIHLALQLYDEMLRR 500
                 +A+   D + +R
Sbjct: 579 RRDKTTIAVSFLDGLDKR 596



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 175/384 (45%), Gaps = 6/384 (1%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  PD  +   LV   C+ G  E+AD ++  M     S + AT    +  +CR       
Sbjct: 176 GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDV 235

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTI 266
             LF  M   G  PN V +   V  LCK+G +  A   L E++    GK    +V T T 
Sbjct: 236 PGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMV----GKGLKPNVYTHTS 291

Query: 267 LMDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
           L+D   K G   +A  L+  + +  + + ++  Y V+I G+C  G ++ A     +M+++
Sbjct: 292 LIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQ 351

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  P+  TY TL++  C+ G  D A      +   G  P+  +Y  II G C  G I +A
Sbjct: 352 GLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQA 411

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            + L     + + P+   + ++I  + + G ++ A  + + M       ++ T+  +I  
Sbjct: 412 YKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAM 471

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             +   +  +  L  + L  G+ P   TY  +I   C +G    AL++++ M++ G  PD
Sbjct: 472 YCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPD 531

Query: 506 IITYTELIKGHCARGNMKEAEEVF 529
            ITY  LI G C    ++EA  +F
Sbjct: 532 PITYGALISGLCKESRLEEARALF 555



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 1/220 (0%)

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
           +H        GV PD  S++ ++ G C  G   +A   L +M  +    +     V++  
Sbjct: 166 AHARQAFDGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRA 225

Query: 411 YGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           + R G   +   +   M+  G   NV  + A +    + G +  AF + +EM+  G+ P+
Sbjct: 226 FCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPN 285

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRG-ITPDIITYTELIKGHCARGNMKEAEEVF 529
           V+T+  LI   C +G    A +L+ ++++     P++ TYT +I G+C  G +  AE + 
Sbjct: 286 VYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLL 345

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
            ++   GLA +   +  L   + R    D+A ++  K  L
Sbjct: 346 GRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKL 385



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 41/272 (15%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  GKI  A  + R    +G  PD +T+  L+ E CK G +  A  +  +M+E 
Sbjct: 397 AIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAEN 456

Query: 183 RPSPNC-----------------------------------ATYNAFITGYCRVNELDKA 207
              P+                                     TY + I GYCRV +   A
Sbjct: 457 SCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSA 516

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           L +F  M  +G  P+ +T+  L+  LCK+  L +A      +L  D      DV   T+ 
Sbjct: 517 LKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETML--DKHMVPCDVTCVTLA 574

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
            +  +   DK      + D   K  Q    A + L+       ++ +A  +   +L + +
Sbjct: 575 YE--YCRRDKTTIAVSFLDGLDKRQQAH--AADALVRKLSAVDNLDAASLFLKNVLDKHY 630

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
             D  TY + +N   +  +   AS     +SK
Sbjct: 631 AVDHATYTSFINSCYESNRYALASEISEKISK 662


>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 186/390 (47%), Gaps = 4/390 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++KG  PDV     L+ +LCK   + KA  V+  M      P+ A+Y   ++  CR   
Sbjct: 88  MVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGN 147

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +  A+ L   M   G   N  T+N LV  LC  G L  +++ L  ++         +  T
Sbjct: 148 VGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKG---LVPNAYT 204

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            + L+++ +K     +A  L +++  K  + ++V+YNVL+ G C  G    A   F ++ 
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            +GF P+V++YN LL  LC +G+ +EA+     +     +P  ++Y  +I  L +HG   
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTE 324

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A E L  M+     P    +N II    +   +       D M+    + N  T+NA I
Sbjct: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-I 383

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                 G + +AFS+ + +     F     Y ++I + C  G+ + A QL  EM + G T
Sbjct: 384 ATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFT 443

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           PD  TY+ LI+G C  G + EA E+F+ ++
Sbjct: 444 PDSFTYSSLIRGLCMEGMLNEAIEIFSVME 473



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 184/418 (44%), Gaps = 40/418 (9%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
           T+   + +++R LC+ G +  +L L  ++IQKG VP+  T+++L+    K    ++A  +
Sbjct: 165 TNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKL 224

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           + E+      PN  +YN  +TG C+    + A+ LF  + + G  PN V++NIL+ +LC 
Sbjct: 225 LDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCN 284

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
           +G   +A   L E+  D+   +T   +T  IL+ S   +G    AL +  +M +   +  
Sbjct: 285 EGRWEEANVLLAEMDGDERSPST---VTYNILIGSLTLHGRTEHALEVLEEMIRARFKPT 341

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
             +YN +I   C +  +        QM+ R   P+  TYN +   LC++G + EA     
Sbjct: 342 ASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQ 400

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            L        Q  YK +I  LC  G+   A + L  M +    P+   ++ +I G    G
Sbjct: 401 SLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEG 460

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            L+ A  I                                FS+ +E     I  D   YN
Sbjct: 461 MLNEAIEI--------------------------------FSVMEE----NIKLDTENYN 484

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            LI   C      LAL +++ M+ +G   +  TYT L++G      M  A EV  ++Q
Sbjct: 485 SLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQ 542



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 114/221 (51%)

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           ++ AF +   M+++G  PDV     LL  LCK  K+ +A     ++  +G+ PD  SY  
Sbjct: 78  LNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTF 137

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++  LC  G++  A + +  M E         +N ++ G    G+L+ +  + D ++  G
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N +T++ L+ A  +     +A  L  E++  G  P++ +YN+L+   C  G    A+
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAM 257

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           QL+ E+  +G +P++++Y  L++  C  G  +EA  + A++
Sbjct: 258 QLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM 298



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 128/286 (44%), Gaps = 5/286 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC  G+   A  L  +M      P  +T+N L+  L   G  E A  V+ EM   R
Sbjct: 278 LLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRAR 337

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P  ++YN  I   C+  ++D  +     M      PN  T+N  +  LC++G++ +A 
Sbjct: 338 FKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAF 396

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             + + L +    +T +     I++ S  + G+ + A  L  +M +     D   Y+ LI
Sbjct: 397 SII-QSLGNKQHFSTQEFYK--IVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLI 453

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C+ G ++ A   F  M +     D   YN+L+   CK  + D A   + ++   G  
Sbjct: 454 RGLCMEGMLNEAIEIFSVM-EENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYL 512

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
            ++ +Y  +++G+    ++  A E L  +  + V+ +  +  +I+ 
Sbjct: 513 ANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLIMQ 558



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 103/205 (50%)

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K+ +L++A      + + G  PD      ++  LC    + KA + +  M+   ++P+  
Sbjct: 74  KELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAA 133

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +  ++    R G++  A  + D M  +G  +N  T+N+L+      G++  +  L   +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRL 193

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           +  G+ P+ +TY+ L+ A+        A +L DE++ +G  P++++Y  L+ G C  G  
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRT 253

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++A ++F ++ + G + + + + IL
Sbjct: 254 EDAMQLFRELPSKGFSPNVVSYNIL 278



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%)

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L++AF   + M+  G   +VF    L+    +   +  A  + + M+  GI PD  +Y  
Sbjct: 78  LNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTF 137

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L+ + C  G++  A+QL D+M   G   +  TY  L++G C  GN+ ++ ++  ++   G
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDI 563
           L  +   +  L +   + + +D+A  +
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKL 224


>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 186/390 (47%), Gaps = 4/390 (1%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++KG  PDV     L+ +LCK   + KA  V+  M      P+ A+Y   ++  CR   
Sbjct: 88  MVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGN 147

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +  A+ L   M   G   N  T+N LV  LC  G L  +++ L  ++         +  T
Sbjct: 148 VGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKG---LVPNAYT 204

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            + L+++ +K     +A  L +++  K  + ++V+YNVL+ G C  G    A   F ++ 
Sbjct: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            +GF P+V++YN LL  LC +G+ +EA+     +     +P  ++Y  +I  L +HG   
Sbjct: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTE 324

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A E L  M+     P    +N II    +   +       D M+    + N  T+NA I
Sbjct: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-I 383

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                 G + +AFS+ + +     F     Y ++I + C  G+ + A QL  EM + G T
Sbjct: 384 ATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFT 443

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           PD  TY+ LI+G C  G + EA E+F+ ++
Sbjct: 444 PDSFTYSSLIRGLCMEGMLNEAIEIFSVME 473



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 184/418 (44%), Gaps = 40/418 (9%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
           T+   + +++R LC+ G +  +L L  ++IQKG VP+  T+++L+    K    ++A  +
Sbjct: 165 TNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKL 224

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           + E+      PN  +YN  +TG C+    + A+ LF  + + G  PN V++NIL+ +LC 
Sbjct: 225 LDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCN 284

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
           +G   +A   L E+  D+   +T   +T  IL+ S   +G    AL +  +M +   +  
Sbjct: 285 EGRWEEANVLLAEMDGDERSPST---VTYNILIGSLTLHGRTEHALEVLEEMIRARFKPT 341

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
             +YN +I   C +  +        QM+ R   P+  TYN +   LC++G + EA     
Sbjct: 342 ASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQ 400

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            L        Q  YK +I  LC  G+   A + L  M +    P+   ++ +I G    G
Sbjct: 401 SLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEG 460

Query: 416 DLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            L+ A  I                                FS+ +E     I  D   YN
Sbjct: 461 MLNEAIEI--------------------------------FSVMEE----NIKLDTENYN 484

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
            LI   C      LAL +++ M+ +G   +  TYT L++G      M  A EV  ++Q
Sbjct: 485 SLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQ 542



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 114/221 (51%)

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           ++ AF +   M+++G  PDV     LL  LCK  K+ +A     ++  +G+ PD  SY  
Sbjct: 78  LNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTF 137

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++  LC  G++  A + +  M E         +N ++ G    G+L+ +  + D ++  G
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           +  N +T++ L+ A  +     +A  L  E++  G  P++ +YN+L+   C  G    A+
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAM 257

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           QL+ E+  +G +P++++Y  L++  C  G  +EA  + A++
Sbjct: 258 QLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM 298



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 128/286 (44%), Gaps = 5/286 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC  G+   A  L  +M      P  +T+N L+  L   G  E A  V+ EM   R
Sbjct: 278 LLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRAR 337

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P  ++YN  I   C+  ++D  +     M      PN  T+N  +  LC++G++ +A 
Sbjct: 338 FKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAF 396

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             + + L +    +T +     I++ S  + G+ + A  L  +M +     D   Y+ LI
Sbjct: 397 SII-QSLGNKQHFSTQEFYK--IVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLI 453

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C+ G ++ A   F  M +     D   YN+L+   CK  + D A   + ++   G  
Sbjct: 454 RGLCMEGMLNEAIEIFSVM-EENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYL 512

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
            ++ +Y  +++G+    ++  A E L  +  + V+ +  +  +++ 
Sbjct: 513 ANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLVMQ 558



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 103/205 (50%)

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K+ +L++A      + + G  PD      ++  LC    + KA + +  M+   ++P+  
Sbjct: 74  KELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAA 133

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
            +  ++    R G++  A  + D M  +G  +N  T+N+L+      G++  +  L   +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRL 193

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           +  G+ P+ +TY+ L+ A+        A +L DE++ +G  P++++Y  L+ G C  G  
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRT 253

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++A ++F ++ + G + + + + IL
Sbjct: 254 EDAMQLFRELPSKGFSPNVVSYNIL 278



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%)

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L++AF   + M+  G   +VF    L+    +   +  A  + + M+  GI PD  +Y  
Sbjct: 78  LNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTF 137

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L+ + C  G++  A+QL D+M   G   +  TY  L++G C  GN+ ++ ++  ++   G
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197

Query: 537 LAIDHIPFRILKKRYRRMKESDKARDI 563
           L  +   +  L +   + + +D+A  +
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKL 224


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 174/348 (50%), Gaps = 3/348 (0%)

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R  E++++  L+  + ++G  P     N+L+H  CK G +G+A     E+          
Sbjct: 225 RPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEI---PKRGLRP 281

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
            V++   L+    K+GD  +   L   M  + +  D+  ++ LING C  G +      F
Sbjct: 282 TVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLF 341

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
            +M  RG +P+ +T+ TL++  CK GK+D A   + ++   GV PD ++Y  +I GLC  
Sbjct: 342 DEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKV 401

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           GD+ +AR  +  M    + P+   +  +IDG  + GD+ +A  I+  M+  G+  +   F
Sbjct: 402 GDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAF 461

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
            ALI    R G + DA  +  +ML  G  PD  TY ++I   C  G + +  +L  EM  
Sbjct: 462 TALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQS 521

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            G  P ++TY  L+ G C +G MK A+ +   +  +G+A + I + IL
Sbjct: 522 DGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNIL 569



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 199/430 (46%), Gaps = 49/430 (11%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL+L  +++  G  P +   N L++  CK GD+  A  V  E+ +    P   ++N  I+
Sbjct: 234 ALYL--EVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLIS 291

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G C+  ++++   L   M + G+ P+  T + L++ LCK+G L             D+G 
Sbjct: 292 GCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRL-------------DEGS 338

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
                                     L+++M  + +  + V +  LI+G C  G +  A 
Sbjct: 339 L-------------------------LFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLAL 373

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
             F  ML +G  PD++TYN L+N LCK G L EA      ++ +G+ PD+I++ T+I G 
Sbjct: 374 KNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGC 433

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  GD+  A E    M+E+ +  +   +  +I G  R G + +A  +   MLS G   + 
Sbjct: 434 CKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDD 493

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
            T+  +I    + G +   F L KEM  DG  P V TYN L+   C  G +  A  L D 
Sbjct: 494 PTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDA 553

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKE 556
           ML  G+ P+ ITY  L+ GH   G+  +  ++F   +  GL  D+  +  L      + E
Sbjct: 554 MLNVGVAPNDITYNILLDGHSKHGSSVDV-DIFNSEK--GLVTDYASYTAL------VNE 604

Query: 557 SDKARDIHQK 566
           S K    H K
Sbjct: 605 SSKTSKDHLK 614



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 146/293 (49%), Gaps = 3/293 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G +     L+  M  +G  PDV T + L+N LCK G L++   +  EM   
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  T+   I G C+  ++D AL  F  M   G+RP+ VT+N L++ LCK G L +A
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + + E+ A        D IT T L+D   K+GD   AL +   M ++ I+ D VA+  L
Sbjct: 408 RRLVNEMTASG---LKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTAL 464

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C  G +  A      ML  GF PD  TY  +++C CK+G +         +   G 
Sbjct: 465 ISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGH 524

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            P  ++Y  ++ GLC  G +  A+  L +ML   V P    +N+++DG+ + G
Sbjct: 525 VPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 174/367 (47%), Gaps = 6/367 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++   C  G +G A  +  ++ ++G  P V++ N L++  CK GD+E+   +   M   
Sbjct: 253 VLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESE 312

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  T++A I G C+   LD+   LF  M   G+ PN VT   L+   CK G +  A
Sbjct: 313 GVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLA 372

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +K    +LA        D++T   L++   K GD  +A  L N+M    ++ D + +  L
Sbjct: 373 LKNFQMMLAQG---VRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTL 429

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C +GD+ SA     +M++ G   D + +  L++ LC++G++ +A      +   G 
Sbjct: 430 IDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGF 489

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  +Y  +I   C  GD+    + L  M     VP    +N +++G  + G + NA  
Sbjct: 490 KPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKM 549

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D ML+ GV+ N  T+N L+   ++ GS  D      E    G+  D  +Y  L+  S 
Sbjct: 550 LLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNSE---KGLVTDYASYTALVNESS 606

Query: 483 NLGHIHL 489
                HL
Sbjct: 607 KTSKDHL 613



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 97/193 (50%), Gaps = 10/193 (5%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D      +I   C  G + +AL ++R+M+++G   D +    L++ LC+ G +  A 
Sbjct: 419 LKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAG 478

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M      P+  TY   I  +C+  ++     L   M ++G  P  VT+N L++ L
Sbjct: 479 RMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGL 538

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF--QKN 291
           CK+G + +A   L  +L  + G A +D IT  IL+D + K+G          D+F  +K 
Sbjct: 539 CKQGQMKNAKMLLDAML--NVGVAPND-ITYNILLDGHSKHGSSVDV-----DIFNSEKG 590

Query: 292 IQTDIVAYNVLIN 304
           + TD  +Y  L+N
Sbjct: 591 LVTDYASYTALVN 603


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 141/549 (25%), Positives = 230/549 (41%), Gaps = 77/549 (14%)

Query: 92  LILKENLDRLKTMRDTGPVRCTLE----TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQK 147
           L++K    R +  +    + C +E     D   +  +I   C  G++  AL +R  M++ 
Sbjct: 331 LLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKV 390

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G   + +  N L+N  CK+G + KA  V+  M +    P+   YN  + G+C+  +  KA
Sbjct: 391 GLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKA 450

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M N G+    VT+N L+  L   G +  A+      L    G A ++V   T L
Sbjct: 451 FKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWN--LMHKRGVAPNEVTYCT-L 507

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D++FK G   +A+ +W D   K     I  YN +I GFC    +  A   F +M + GF
Sbjct: 508 LDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGF 567

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA------------------------ 363
            PD ITY TL++  CK G L EA     +  + G++                        
Sbjct: 568 PPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNG 627

Query: 364 -----------PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
                      P+ ++Y ++I G C  G + KA      M++K + P   I + I+    
Sbjct: 628 LLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLY 687

Query: 413 RCGDLSNA-----------------------------FSIRDLMLSFGVS------SNVF 437
           R G +  A                                + ++ SFG        SN  
Sbjct: 688 RHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNI 747

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            +N  I    +  +I D   +  ++LL G  PD +TY  LI A   +G ++ A  L D+M
Sbjct: 748 VYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDM 807

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKES 557
           +  G+ P+I+ Y  LI G C  GN+  A  +F K+   GL+   + +  L   Y +   +
Sbjct: 808 INAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRT 867

Query: 558 DKARDIHQK 566
            +A ++  K
Sbjct: 868 TEALELKDK 876



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 204/478 (42%), Gaps = 32/478 (6%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++   C  G++  A    ++M +    P+V+T+N L++    +GD+  A  V+
Sbjct: 255 DIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVL 314

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             MSE     N  TY   I GYC+  ++++A  L   M    +  +   + +L+HA C  
Sbjct: 315 ALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTA 374

Query: 237 GLLGDAVKF-------------------------LGEV-------LADDDGKATSDVITS 264
           G + DA++                          LG V       ++  D     D    
Sbjct: 375 GRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGY 434

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
             L+D + K  D  +A  L ++M  K +   +V YN L+      G +  A   +  M K
Sbjct: 435 NTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHK 494

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           RG  P+ +TY TLL+   K G  D A   +      G       Y T+I G C    +V+
Sbjct: 495 RGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQ 554

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A+E  L M E    P+   +  +IDGY + G+L  A  ++D+    G+SS+   +N+LI 
Sbjct: 555 AQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLIT 614

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              R   +     L  EM    + P+V TY  LI   C+ G +  A   Y +M+ +GI P
Sbjct: 615 GVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAP 674

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARD 562
           +II  ++++      G + EA  +  +I  +     H     L K   R  E+ K  D
Sbjct: 675 NIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVD 732



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 219/464 (47%), Gaps = 16/464 (3%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALW-----LRRKMIQKGTVPDVLTHNYLVNELCK 165
           R  +  + R ++  +  LC    I +A+W     + R+     TV D++   +    + K
Sbjct: 144 RARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVFAEKGMTK 203

Query: 166 IGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
                 A  V   M +    P+  + N+ ++   +  E  KAL ++  M   GI P+  +
Sbjct: 204 F-----ALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFS 258

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
           + I+V+A CK+G + +A  F+ E+   +      +V+T   L+D Y   GD   A  +  
Sbjct: 259 YTIMVNAYCKEGRVDEAFNFVKEM---ERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLA 315

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M +K I  +   Y +LI G+C  G +  A      M+++    D   Y  L++  C  G
Sbjct: 316 LMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAG 375

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           ++D+A      + K G+  + +   ++I G C  G + KA E L+SM + ++ P+ + +N
Sbjct: 376 RVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYN 435

Query: 406 VIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD 465
            ++DG+ +  D   AF + D M + GV+  V T+N L+      G +  A  +   M   
Sbjct: 436 TLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKR 495

Query: 466 GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
           G+ P+  TY  L+ A   +G    A+ ++ + L +G T  I  Y  +I G C    + +A
Sbjct: 496 GVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQA 555

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRR---MKESDKARDIHQK 566
           +E+F K++ LG   D I +R L   Y +   + E+ K +D+ ++
Sbjct: 556 QEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSER 599



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 215/448 (47%), Gaps = 38/448 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++++L   G +  AL +   M ++G  P+ +T+  L++   K+G  ++A  + ++     
Sbjct: 472 LLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKG 531

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            + +   YN  I G+C++ +L +A  +F  M   G  P+ +T+  L+   CK G L +A+
Sbjct: 532 FTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEAL 591

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K   + +++ DG ++S  + ++ L+   F++ +  +   L  +M  + +  ++V Y  LI
Sbjct: 592 KL--KDMSERDGISSSTEMYNS-LITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLI 648

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA------------- 350
            G+C  G +  A+  + +M+ +G  P++I  + +++ L + GK+DEA             
Sbjct: 649 AGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPI 708

Query: 351 -SHFYGV-LSKTGV--------------------APDQISYKTIIQGLCIHGDIVKAREF 388
            +H + V L K+ +                      + I Y   I GLC   +I   R  
Sbjct: 709 AAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRI 768

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L  +L K   P+ + +  +I      G ++ AF +RD M++ G+  N+  +NALI    +
Sbjct: 769 LSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCK 828

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            G++  A  L  ++   G+ P V TYN LI   C  G    AL+L D+M   GI P  IT
Sbjct: 829 SGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSIT 888

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLG 536
           Y+ LI G    G  +++  +  ++   G
Sbjct: 889 YSTLIHGLYMEGKSEQSVGLLNEMMKAG 916



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 167/363 (46%), Gaps = 28/363 (7%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E  YR    +I   C  G +  AL L+    + G       +N L+  + +  +L+K + 
Sbjct: 571 EITYR---TLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNG 627

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           ++ EM     SPN  TY + I G+C    +DKA + +  M + GI PN +  + +V +L 
Sbjct: 628 LLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLY 687

Query: 235 KKGLLGDAVKFLGEVLADDDGKAT---------SDV--ITSTILMDSYFKNGDKFQALAL 283
           + G + +A   L ++ AD D  A          SD+  + +  ++DS+   G K  ++ +
Sbjct: 688 RHGKIDEANLILHQI-ADIDPIAAHAHSVELPKSDLRHLETQKIVDSF---GKKAMSIPI 743

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            N+          + YN+ I G C + +I         +L +GF PD  TY +L++    
Sbjct: 744 SNN----------IVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSA 793

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
            GK++EA      +   G+ P+ + Y  +I GLC  G++ +AR     +  K + P    
Sbjct: 794 VGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVT 853

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           +N +IDGY + G  + A  ++D M   G+  +  T++ LI      G    +  L  EM+
Sbjct: 854 YNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMM 913

Query: 464 LDG 466
             G
Sbjct: 914 KAG 916



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 4/146 (2%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           GK+  A  LR  MI  G VP+++ +N L+N LCK G+L++A  +  +++    SP   TY
Sbjct: 795 GKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTY 854

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           N  I GYC+     +AL L   M   GI P+ +T++ L+H L  +G    +V  L E++ 
Sbjct: 855 NTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMK 914

Query: 252 DDDGKATSDVITSTILMDSYFKNGDK 277
              G +  D + +     +Y K  DK
Sbjct: 915 AGKGSSVMDPLVAR----AYVKWRDK 936



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 84/171 (49%)

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           VP     N ++    + G+   A  + + M++ G+  ++F++  ++ A  + G + +AF+
Sbjct: 218 VPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFN 277

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
             KEM      P+V TYN LI    +LG +  A ++   M  +GI  +  TYT LIKG+C
Sbjct: 278 FVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYC 337

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            RG M++AE++   +    L +D   + +L   Y      D A  I    L
Sbjct: 338 KRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAML 388


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 210/439 (47%), Gaps = 22/439 (5%)

Query: 136 TALWLRRKMIQKGTVPDVLTHNYLVNELCKIG----DLEKADHVIREMSEMRPSPNCATY 191
           T L L +KM  +G  P++   N L+   C++G     + +A     ++  +    +  +Y
Sbjct: 104 TVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSY 163

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
              I G C+V E   AL L   +    ++ N V +N +++ +CK   + DA     E+++
Sbjct: 164 GTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVS 223

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                 + +V+T + L+  +F  G    A+ L+N +  +NI+ D   +N+L++GFC +  
Sbjct: 224 KG---ISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRK 280

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +      F  M+K+G +PDV+TYN+L++  C   +++ A   +  +++ GV PD  SY  
Sbjct: 281 MKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNI 340

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I G C    + KA      M  K+++P    +N +IDG  + G +S A  + D M   G
Sbjct: 341 LINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRG 400

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           V  N+ T+N++I A  +   +  A +L  +    GI P ++TY +LI   C +       
Sbjct: 401 VPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKV------- 453

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
                    G    + TY  +I G C +G   EA  + +K++      + + + I  +  
Sbjct: 454 --------EGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSL 505

Query: 552 RRMKESDKARDIHQKWLLR 570
               E+DKA  + ++ + R
Sbjct: 506 LDNNENDKAEKLFREMITR 524



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 193/407 (47%), Gaps = 22/407 (5%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           +I  A     K++  G   D +++  L++ LCK+G+   A  +++ +       N   YN
Sbjct: 140 QIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYN 199

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I G C+   ++ A  L+S M + GI PN VT++ L+      G L DA+    +++ +
Sbjct: 200 TVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILE 259

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
           +      D  T  IL+D + K+    +   ++  M ++ I  D+V YN L++G+CL  ++
Sbjct: 260 N---IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEV 316

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           ++A + F  M + G  PD+ +YN L+N  CK  K+D+A + +  +    + P+ ++Y ++
Sbjct: 317 NTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSL 376

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I GL   G I  A + +  M ++ V P    +N IID   +   +  A ++       G+
Sbjct: 377 IDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGI 436

Query: 433 SSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
             +++T+  LI  L +  G  I                  V TYN++I   C  G    A
Sbjct: 437 QPSMYTYTILIDGLCKVEGYDI-----------------TVNTYNVMIHGFCKKGLFDEA 479

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           L L  +M      P+ +TY   I+         +AE++F ++ T GL
Sbjct: 480 LSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGL 526



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 178/383 (46%), Gaps = 5/383 (1%)

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           D++ A  +   +    P+P    +N  +    +       L L   M   GI+PN    N
Sbjct: 66  DVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCN 125

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATS---DVITSTILMDSYFKNGDKFQALALW 284
           IL++  C+ GL+    +     L  D   A     D ++   L+    K G+   AL L 
Sbjct: 126 ILIYCFCQLGLI--PCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLL 183

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
             +  K +Q + V YN +I G C +  ++ AF  + +M+ +G  P+V+TY+ L++     
Sbjct: 184 QRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVV 243

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
           GKL +A   +  +    + PD  ++  ++ G C    + + +     M+++ ++P+   +
Sbjct: 244 GKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTY 303

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           N ++DGY    +++ A SI + M   GV+ ++ ++N LI    +   +  A +L  EM  
Sbjct: 304 NSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHC 363

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
             I P+V TYN LI      G I  ALQL D+M  RG+ P+I+TY  +I        + +
Sbjct: 364 KNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDK 423

Query: 525 AEEVFAKIQTLGLAIDHIPFRIL 547
           A  +  K +  G+      + IL
Sbjct: 424 AIALITKFKDQGIQPSMYTYTIL 446



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 178/386 (46%), Gaps = 18/386 (4%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I  LC  G+   AL L +++  K    + + +N ++  +CK   +  A  + 
Sbjct: 159 DQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLY 218

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM     SPN  TY+A I+G+  V +L  A+ LF+ +    I+P+  T NILV   CK 
Sbjct: 219 SEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKD 278

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             + +       ++         DV+T   LMD Y    +   A +++N M Q  +  DI
Sbjct: 279 RKMKEGKTVFAMMMKQG---IIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDI 335

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
            +YN+LINGFC    +  A   F +M  +  +P+V+TYN+L++ L K G++  A      
Sbjct: 336 RSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQ 395

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   GV P+ ++Y +II  L     + KA   +    ++ + P  + + ++IDG  +   
Sbjct: 396 MHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVE- 454

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
                         G    V T+N +I    + G   +A SL  +M      P+  TY +
Sbjct: 455 --------------GYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEI 500

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGI 502
            I +  +      A +L+ EM+ RG+
Sbjct: 501 TIRSLLDNNENDKAEKLFREMITRGL 526



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 157/308 (50%), Gaps = 8/308 (2%)

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
           ++  N D   A++L+N + ++N       +N ++     +    +  +   +M  RG  P
Sbjct: 60  TFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKP 119

Query: 330 DVITYNTLLNCLCKQG----KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           ++   N L+ C C+ G    ++ +A  F+  L   G   DQ+SY T+I GLC  G+   A
Sbjct: 120 NLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 179

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGD--LSNAFSIRDLMLSFGVSSNVFTFNALI 443
            + L  +  K V     ++N +I  YG C D  +++AF +   M+S G+S NV T++ALI
Sbjct: 180 LDLLQRVDGKLVQLNAVMYNTVI--YGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 237

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
                 G + DA  L  +++L+ I PD +T+N+L+   C    +     ++  M+++GI 
Sbjct: 238 SGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGII 297

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           PD++TY  L+ G+C    +  A+ +F  +   G+  D   + IL   + ++K+ DKA ++
Sbjct: 298 PDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNL 357

Query: 564 HQKWLLRN 571
             +   +N
Sbjct: 358 FNEMHCKN 365



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 164/373 (43%), Gaps = 59/373 (15%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I    + GK+  A+ L  K+I +   PD  T N LV+  CK   +++   V   M 
Sbjct: 233 YSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMM 292

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    P+  TYN+ + GYC V E++ A  +F+TMA  G+ P+  ++NIL++  CK     
Sbjct: 293 KQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCK----- 347

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
                                           K  DK  A+ L+N+M  KNI  ++V YN
Sbjct: 348 -------------------------------IKKVDK--AMNLFNEMHCKNIIPNVVTYN 374

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+G   +G IS A     QM  RG  P+++TYN++++ L K  ++D+A          
Sbjct: 375 SLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQ 434

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P   +Y  +I GLC      K   + +++         + +NV+I G+ + G    A
Sbjct: 435 GIQPSMYTYTILIDGLC------KVEGYDITV---------NTYNVMIHGFCKKGLFDEA 479

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
            S+   M       N  T+   I +         A  L +EM+  G+     +Y      
Sbjct: 480 LSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASY------ 533

Query: 481 SCNLGHIHLALQL 493
            C+   IH +L +
Sbjct: 534 PCSSMKIHQSLTM 546



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 23/206 (11%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D R +  +I   C   K+  A+ L  +M  K  +P+V+T+N L++ L K G +  A 
Sbjct: 331 VNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYAL 390

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV--- 230
            ++ +M +    PN  TYN+ I    + +++DKA+ L +   + GI+P+  T+ IL+   
Sbjct: 391 QLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGL 450

Query: 231 -----------------HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
                            H  CKKGL  +A+  L ++    D     + +T  I + S   
Sbjct: 451 CKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKM---KDSSCIPNAVTYEITIRSLLD 507

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAY 299
           N +  +A  L+ +M  + +     +Y
Sbjct: 508 NNENDKAEKLFREMITRGLLNRSASY 533


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 196/381 (51%), Gaps = 3/381 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KM++ G  PD++T N L+N  C    +  A  ++ +M EM   P+  T+   I G    N
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +  +A+ L   M   G +P+ VT+  +V+ LCK+G    A+  L ++ A    K  ++V+
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA---AKIEANVV 254

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
             + ++DS  K   +  AL L+ +M  K ++ +++ Y+ LI+  C  G  S A      M
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           ++R   P+++T++ L++   K+GKL +A   Y  + K  + P+  +Y ++I G C+   +
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +A++ L  M+ K  +P    +N +I+G+ +   +     +   M   G+  N  T+  L
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    +     +A  + K+M+  G+ P++ TYN+L+   C  G +  A+ +++ + R  +
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494

Query: 503 TPDIITYTELIKGHCARGNMK 523
            PDI TY  +I+G C  G  K
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWK 515



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 209/435 (48%), Gaps = 14/435 (3%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           DYR    V+R      ++  A+ L   M Q    P ++  + L++ + K+   +      
Sbjct: 45  DYRE---VLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFG 101

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M  +  S N  TYN  I  +CR + L  AL L   M   G  P+ VT N L++  C  
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             + DAV  + +++   +     D +T T L+   F +    +A+AL + M Q+  Q D+
Sbjct: 162 NRISDAVALVDQMV---EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDL 218

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  ++NG C  GD   A     +M       +V+ Y+T+++ LCK    D+A + +  
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 278

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           +   GV P+ I+Y ++I  LC +G    A   L  M+E+ + P    ++ +ID + + G 
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI----FPDVF 472
           L  A  + + M+   +  N+FT+++LI     G  + D     K+ML   I     P+V 
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLI----NGFCMLDRLGEAKQMLELMIRKDCLPNVV 394

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TYN LI   C    +   ++L+ EM +RG+  + +TYT LI G     +   A+ VF ++
Sbjct: 395 TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454

Query: 533 QTLGLAIDHIPFRIL 547
            ++G+  + + + IL
Sbjct: 455 VSVGVHPNILTYNIL 469



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 191/406 (47%), Gaps = 3/406 (0%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
            KM   G   ++ T+N L+N  C+   L  A  ++ +M ++   P+  T N+ + G+C  
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
           N +  A+ L   M   G +P+ VT   L+H L       +AV  +  ++         D+
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG---CQPDL 218

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +T   +++   K GD   AL L N M    I+ ++V Y+ +I+  C       A   F +
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 278

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M  +G  P+VITY++L++CLC  G+  +AS     + +  + P+ +++  +I      G 
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           +VKA +    M+++S+ P    ++ +I+G+     L  A  + +LM+      NV T+N 
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 398

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI    +   +     L +EM   G+  +  TY  LI           A  ++ +M+  G
Sbjct: 399 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 458

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + P+I+TY  L+ G C  G + +A  VF  +Q   +  D   + I+
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 197/404 (48%), Gaps = 9/404 (2%)

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
           +L+ A  +   M++ RP P+   ++  ++   ++N+ D  +     M   GI  N  T+N
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           IL++  C+   L  A+  LG+++         D++T   L++ +        A+AL + M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLG---YEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            +   + D V +  LI+G  L+   S A A   +M++RG  PD++TY  ++N LCK+G  
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
           D A +    +    +  + + Y T+I  LC +     A      M  K V P    ++ +
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294

Query: 408 ID---GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           I     YGR  D S   S    M+   ++ N+ TF+ALI A  + G +  A  L +EM+ 
Sbjct: 295 ISCLCNYGRWSDASRLLSD---MIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
             I P++FTY+ LI   C L  +  A Q+ + M+R+   P+++TY  LI G C    + +
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             E+F ++   GL  + + +  L   + + ++ D A+ + ++ +
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 455



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 185/379 (48%), Gaps = 44/379 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++   C G +I  A+ L  +M++ G  PD +T   L++ L       +A  +I  M + 
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR 212

Query: 183 RPSPNCATYNAFITGYCR----------VNEL-------------------------DKA 207
              P+  TY A + G C+          +N++                         D A
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           L+LF+ M N G+RPN +T++ L+  LC  G   DA + L +++   + K   +++T + L
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI---ERKINPNLVTFSAL 329

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D++ K G   +A  L+ +M +++I  +I  Y+ LINGFC+   +  A      M+++  
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC 389

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           LP+V+TYNTL+N  CK  ++D+    +  +S+ G+  + ++Y T+I G     D   A+ 
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 449

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M+   V P    +N+++DG  + G L+ A  + + +    +  +++T+N +I    
Sbjct: 450 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509

Query: 448 R------GGSIFDAFSLKK 460
           +      GG  F A +LK+
Sbjct: 510 KAGKWKMGGIYFVASALKE 528



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 139/267 (52%), Gaps = 3/267 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E +   +  VI  LC       AL L  +M  KG  P+V+T++ L++ LC  G    A 
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M E + +PN  T++A I  + +  +L KA  L+  M    I PN  T++ L++  
Sbjct: 309 RLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C    LG+A + L  ++  D      +V+T   L++ + K     + + L+ +M Q+ + 
Sbjct: 369 CMLDRLGEAKQMLELMIRKD---CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            + V Y  LI+GF    D  +A   F QM+  G  P+++TYN LL+ LCK GKL +A   
Sbjct: 426 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 485

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHG 380
           +  L ++ + PD  +Y  +I+G+C  G
Sbjct: 486 FEYLQRSTMEPDIYTYNIMIEGMCKAG 512



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 131/292 (44%)

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A+ L+  M Q      I+ ++ L++            ++  +M   G   ++ TYN L+N
Sbjct: 62  AIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILIN 121

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
           C C+  +L  A    G + K G  PD ++  +++ G C    I  A   +  M+E    P
Sbjct: 122 CFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
           +   +  +I G       S A ++ D M+  G   ++ T+ A++    + G    A +L 
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCAR 519
            +M    I  +V  Y+ +I + C   H   AL L+ EM  +G+ P++ITY+ LI   C  
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301

Query: 520 GNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           G   +A  + + +    +  + + F  L   + +  +  KA  ++++ + R+
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 38/210 (18%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           ++ +++ +   + ++I   C+  ++G A  +   MI+K  +P+V+T+N L+N  CK   +
Sbjct: 350 IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV 409

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           +K   + REMS+     N  TY   I G+ +  + D A  +F  M + G+ PN +T+NIL
Sbjct: 410 DKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 469

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +  LCK G L                                       +A+ ++  + +
Sbjct: 470 LDGLCKNGKLA--------------------------------------KAMVVFEYLQR 491

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
             ++ DI  YN++I G C  G       YF
Sbjct: 492 STMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 191/414 (46%), Gaps = 3/414 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+  C  G++     L  + ++ G  P   T+N L+   C+  +      V+  M    
Sbjct: 234 LIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARN 293

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P   TY   I G C+  E  +A  +F+ + + G  P+RV +  ++H LC+ G  G+A 
Sbjct: 294 HLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEAR 353

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K   E++  D G   +    +T+L  S  K+GD  +A  L+N+M  K   T  V  N +I
Sbjct: 354 KLWFEMM--DKGMQPNAYTYNTMLHGS-LKSGDFERACELYNEMCNKGYGTTTVTCNKII 410

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +  C  G    AF  F +M + G   D ITYN+L+   CK+GK+DE  +    L      
Sbjct: 411 SELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQ 470

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P    Y+ +I   C  GD   A+  L  M  K + P  + ++ ++ G  + GD  +   +
Sbjct: 471 PSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVREL 530

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            +   + G  +   T N +I      G   +A  + K+M   GI  D  TYN LI   C 
Sbjct: 531 YNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCK 590

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            G +  ++ L +E++ +G+ P   +Y  LI   C  G+ + A+ ++  + + G+
Sbjct: 591 EGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGI 644



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 178/390 (45%), Gaps = 8/390 (2%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            PD ++ N L   L     + +A  ++R+++     P+ A+   ++   C V  +++A+ 
Sbjct: 121 TPDPISSNMLFEALLDAKAV-RAAKMVRDIAGF--IPDSASLEQYVKCLCGVGFIEEAIE 177

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI--L 267
           ++  +   GIR + V  N ++    K G      +F  E++        SD  T T+  L
Sbjct: 178 VYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMI---KAGTASDANTETVGCL 234

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           + ++  +G   +   L N   +  +      YN LI GFC   + +S       M+ R  
Sbjct: 235 IQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNH 294

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           LP + TY  ++N LCK  +  EA   +  L   G APD++ Y T+I GLC  G   +AR+
Sbjct: 295 LPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARK 354

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M++K + P  + +N ++ G  + GD   A  + + M + G  +   T N +I    
Sbjct: 355 LWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELC 414

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G   +AF + K+M   GI  D  TYN LI   C  G +   + L +E++ +   P + 
Sbjct: 415 SRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVS 474

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            Y  LI   C  G+ + A+ +   + + GL
Sbjct: 475 LYELLIIKSCKDGDFEAAKRLLGDMSSKGL 504



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 163/349 (46%), Gaps = 3/349 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +I  LC  G  G A  L  +M+ KG  P+  T+N +++   K GD E+A  +  EM 
Sbjct: 336 YTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMC 395

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                    T N  I+  C   + D+A  +F  M+  GI+ + +T+N L+   CK+G + 
Sbjct: 396 NKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVD 455

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           + +  L E++A D   + S      +L+    K+GD   A  L  DM  K +  +   Y+
Sbjct: 456 ERMNLLNELVAQDPQPSVS---LYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYD 512

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +++G   +GD       + +   +G+     T N +++ LC +GK DEAS  +  +S+T
Sbjct: 513 TMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSET 572

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+  D I+Y ++I+G C  G + K+   L  ++ + + P    +  +I    + GD  +A
Sbjct: 573 GIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESA 632

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
             +   M+S G+  +      LI    + G   +       ML + I P
Sbjct: 633 KRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKP 681



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/425 (22%), Positives = 181/425 (42%), Gaps = 5/425 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREM--SEM 182
           ++ LC  G I  A+ +  ++ + G    ++  N +++   K G  E      +EM  +  
Sbjct: 163 VKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGT 222

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               N  T    I  +C   ++ +   L +     G+ P   T+N L+   C+       
Sbjct: 223 ASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASM 282

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L  ++A +       + T   +++   KN +  +A  ++ND+  +    D V Y  +
Sbjct: 283 SEVLHTMIARNH---LPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTM 339

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C  G    A   + +M+ +G  P+  TYNT+L+   K G  + A   Y  +   G 
Sbjct: 340 IHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGY 399

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
               ++   II  LC  G   +A E    M E  +  +   +N +I G+ + G +    +
Sbjct: 400 GTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMN 459

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + +++     +V  +  LI+   + G    A  L  +M   G+ P+ +TY+ ++  S 
Sbjct: 460 LLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSL 519

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G      +LY+E   +G      T  ++I   C+RG   EA E+F K+   G+  D I
Sbjct: 520 KSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAI 579

Query: 543 PFRIL 547
            +  L
Sbjct: 580 TYNSL 584



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/436 (23%), Positives = 184/436 (42%), Gaps = 8/436 (1%)

Query: 81  GNPQAVFNAL--DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
           GNP   +N L       +N   +  +  T   R  L T Y  +  +I  LC   +   A 
Sbjct: 262 GNP--TYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYT-YQEIINGLCKNEECLEAY 318

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
            +   +  +G  PD + +  +++ LC++G   +A  +  EM +    PN  TYN  + G 
Sbjct: 319 RVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGS 378

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            +  + ++A  L++ M N G     VT N ++  LC +G   +A +   ++    +    
Sbjct: 379 LKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKM---SETGIQ 435

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
           +D IT   L+  + K G   + + L N++  ++ Q  +  Y +LI   C +GD  +A   
Sbjct: 436 ADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRL 495

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
              M  +G  P+  TY+T+L+   K G  +     Y      G      +   II  LC 
Sbjct: 496 LGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCS 555

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G   +A E    M E  +  +   +N +I G+ + G +  + ++ + +++ G+  +  +
Sbjct: 556 RGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASS 615

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           + +LI+   + G    A  L  +M+  GI P       LI   C  G     +     ML
Sbjct: 616 YASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGML 675

Query: 499 RRGITPDIITYTELIK 514
              I P    + +L +
Sbjct: 676 ENKIKPKKAAFEDLAE 691



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 127/281 (45%), Gaps = 8/281 (2%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E  +  K M +TG     ++ D   + ++IR  C  GK+   + L  +++ +   P V  
Sbjct: 421 EAFEVFKKMSETG-----IQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSL 475

Query: 156 HNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           +  L+ + CK GD E A  ++ +MS     PN  TY+  + G  +  + +    L++   
Sbjct: 476 YELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETC 535

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           N G      T N ++  LC +G   +A +   ++    +    +D IT   L+  + K G
Sbjct: 536 NKGYGTTTATCNKIISELCSRGKSDEASEMFKKM---SETGIKADAITYNSLIRGFCKEG 592

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
              +++ L N++  + +Q    +Y  LI   C NGD  SA   +  M+ +G  P      
Sbjct: 593 KVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLRE 652

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            L++ LCKQG+  E       + +  + P + +++ + + L
Sbjct: 653 HLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAECL 693


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 190/387 (49%), Gaps = 10/387 (2%)

Query: 151 PDVLTHNYLVNELCKIGDLEKA----DHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           P V T+  L+   C  G L+       HV+++   + P      +N  + G C     D 
Sbjct: 88  PTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEP----IIFNPLLKGLCADKRTDD 143

Query: 207 ALHL-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           A+ +    M      PN  +H I++  LC +    +A++ L  ++ADD G    +V++ +
Sbjct: 144 AMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELL-HMMADDGGGCLPNVVSYS 202

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            ++D   K GD  +A A + +M  + I  ++V Y+ +I   C    +  A     +M+K 
Sbjct: 203 TVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKN 262

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  P+  TY +L++  C  G+L EA  F   +   GV P+ ++Y + +  LC +G   +A
Sbjct: 263 GVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEA 322

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           R+   SM+++ + P+   ++ ++ GY   G L     + DLM+   +  + + FN LI A
Sbjct: 323 RKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYA 382

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G + +A  +  +M   G+ P+  TY+ LI   C +  +  AL L+ EM+  G++P+
Sbjct: 383 SAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPN 442

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKI 532
            ITY  +++G    G    A+E + +I
Sbjct: 443 FITYNIMLQGLFRTGRTATAKEFYVQI 469



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 185/390 (47%), Gaps = 4/390 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           +P   TY   I   C    LD        +   G R   +  N L+  LC      DA+ 
Sbjct: 87  TPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMD 146

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN--IQTDIVAYNVL 302
            +   + +       +V + TI++          +AL L + M         ++V+Y+ +
Sbjct: 147 IVLRGMTEL--SCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTV 204

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G    GD   A+A + +ML R  LP+V+ Y++++  LCK   +D+A   +  + K GV
Sbjct: 205 IDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGV 264

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+  +Y +++ G C  G + +A +FL  M    V P    ++  +D   + G  + A  
Sbjct: 265 TPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARK 324

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I D M+  G+  ++ T+++L+      G++ +   L   M+   + PD + +N LI AS 
Sbjct: 325 IFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASA 384

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +  A+ ++ +M ++G+ P+ +TY+ LI G+C    M+ A  +F ++ + G++ + I
Sbjct: 385 KQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFI 444

Query: 543 PFRILKKRYRRMKESDKARDIHQKWLLRNK 572
            + I+ +   R   +  A++ + + +   K
Sbjct: 445 TYNIMLQGLFRTGRTATAKEFYVQIIKSGK 474



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 184/376 (48%), Gaps = 6/376 (1%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA-DHVIREMSEMRPSPN 187
           C  G++         +++KG   + +  N L+  LC     + A D V+R M+E+   PN
Sbjct: 101 CSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELSCVPN 160

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNG--IRPNRVTHNILVHALCKKGLLGDAVKF 245
             ++   + G C  N   +AL L   MA++G    PN V+++ ++  L K G    A   
Sbjct: 161 VFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYAT 220

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             E+L   D +   +V+  + ++ +  K     +A+ + + M +  +  +   Y  L++G
Sbjct: 221 YREML---DRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHG 277

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           FC +G ++ A  +  +M   G  P+V+TY++ ++ LCK G+  EA   +  + K G+ PD
Sbjct: 278 FCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPD 337

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
             +Y +++ G  I G +V+       M++  + P+ +++N +I    + G +  A  +  
Sbjct: 338 ITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFS 397

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   G+  N  T++ LI    +   + +A +L +EM+ +G+ P+  TYN+++      G
Sbjct: 398 KMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTG 457

Query: 486 HIHLALQLYDEMLRRG 501
               A + Y ++++ G
Sbjct: 458 RTATAKEFYVQIIKSG 473



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 147/300 (49%), Gaps = 6/300 (2%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L+ L  M D G         Y     VI  L  GG    A    R+M+ +  +P+V+
Sbjct: 178 QEALELLHMMADDGGGCLPNVVSYS---TVIDGLLKGGDPDKAYATYREMLDRRILPNVV 234

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
            ++ ++  LCK   ++KA  V   M +   +PNC TY + + G+C   +L +A+     M
Sbjct: 235 IYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKM 294

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            +NG+ PN VT++  +  LCK G   +A K    ++         D+ T + L+  Y   
Sbjct: 295 CSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRG---LKPDITTYSSLLHGYAIE 351

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +   L++ M Q ++Q D   +N LI      G +  A   F +M ++G  P+ +TY
Sbjct: 352 GALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTY 411

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           +TL+N  CK  +++ A   +  +   GV+P+ I+Y  ++QGL   G    A+EF + +++
Sbjct: 412 STLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQIIK 471



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 2/122 (1%)

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           G   +A  + D +L  G+ + + + N  +  +A     +    F+         + P V 
Sbjct: 32  GGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSRFNRMARAGASMVTPTVH 91

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY +LIG  C+ G + L       ++++G   + I +  L+KG CA     +A ++  + 
Sbjct: 92  TYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRG 151

Query: 533 QT 534
            T
Sbjct: 152 MT 153


>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 574

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 211/426 (49%), Gaps = 39/426 (9%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P   + N L+  L +   ++ AD   R     R SP+  T+N  I+G+C+  +L KA  +
Sbjct: 151 PSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDV 210

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              ++  G+ P+  T+N L+   CK+G +G                              
Sbjct: 211 AKNISAWGVAPSVATYNTLIDGYCKRGQVGKM---------------------------- 242

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                  +   AL  +M Q  I  D+V +NVLING+C   +I++A   F +M ++G   +
Sbjct: 243 -------YHVDALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPAN 295

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+TYN+L++ LC++GK++++      + + G+A    +  +++ G C  G +V+A  ++ 
Sbjct: 296 VVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVD 355

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            + ++ + P    +N ++DGY R G +  A + +D M   G+S NV T+N LI   T   
Sbjct: 356 GIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSR 415

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
                  L  EM   G+  DV TYN+LIGA C  G +  A++L DEM+  G+ P  + Y 
Sbjct: 416 DWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYN 475

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA----RDIHQK 566
            +I G C +G+ + A E+  +++      + + + +  K + +M + D+A     ++ +K
Sbjct: 476 TIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEK 535

Query: 567 WLLRNK 572
            L+ N+
Sbjct: 536 GLVPNR 541



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 182/400 (45%), Gaps = 41/400 (10%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH- 209
           PD+ T N +++  CK G L KA  V + +S    +P+ ATYN  I GYC+  ++ K  H 
Sbjct: 186 PDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHV 245

Query: 210 --LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M   GI P+ VT N+L++  CK+  +  A+K                       
Sbjct: 246 DALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIK----------------------- 282

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
                          ++ +M Q+ I  ++V YN L++G C  G +  +     +M + G 
Sbjct: 283 ---------------VFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGL 327

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
              + T N++LN  CK+G + EA  +   +++ G+ P+ I+Y T++ G    G + +A  
Sbjct: 328 ACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAA 387

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
              +M  K + P    +N +I G+    D  +   + D M   GV ++V T+N LI A  
Sbjct: 388 AKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALC 447

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G +  A  L  EM+  G+ P    YN +I   C  G    A ++   M +R    +++
Sbjct: 448 CKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVV 507

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           TY   +K  C  G M EA  V  ++   GL  + I + I+
Sbjct: 508 TYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEII 547



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 190/392 (48%), Gaps = 26/392 (6%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV---IREMS 180
           VI   C  G++  A  + + +   G  P V T+N L++  CK G + K  HV   ++EM 
Sbjct: 194 VISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMI 253

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   SP+  T+N  I GYC+   +  A+ +F  M   GI  N VT+N LV  LC++G + 
Sbjct: 254 QAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVE 313

Query: 241 DAVKFLGEVLADDDGKATSDVITSTI--LMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           D++K + E+  ++ G A    I ST+  +++ + K G   +A    + + Q+ ++ +++ 
Sbjct: 314 DSIKLVEEM--EELGLAC---ILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVIT 368

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           YN L++G+   G +  A A    M  +G  P+V TYN L+            S     + 
Sbjct: 369 YNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMK 428

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           + GV  D ++Y  +I  LC  G++ KA + L  M+E  + P+   +N II+G+   GD  
Sbjct: 429 EKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQ 488

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  IR  M      +NV T+N  +    + G + +A  +  EML  G+ P+  TY ++ 
Sbjct: 489 GAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEII- 547

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
               N G           M+ +G  PDI  Y 
Sbjct: 548 ----NSG-----------MIEKGYVPDISGYA 564



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 169/393 (43%), Gaps = 41/393 (10%)

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R  P+  + NA +    R + +D A   F       + P+  T NI++   CK G L   
Sbjct: 148 RYRPSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQL--- 204

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                                         K GD  + ++ W       +   +  YN L
Sbjct: 205 -----------------------------RKAGDVAKNISAWG------VAPSVATYNTL 229

Query: 303 INGFCLNGDISSAF---AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           I+G+C  G +   +   A   +M++ G  PDV+T+N L+N  CK+  +  A   +  + +
Sbjct: 230 IDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQ 289

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+  + ++Y +++ GLC  G +  + + +  M E  +       N +++G+ + G +  
Sbjct: 290 QGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVE 349

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
           A    D +   G+  NV T+N L+    R G + +A + K  M   GI P+V TYN LI 
Sbjct: 350 AEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLIT 409

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
                        L DEM  +G+  D++TY  LI   C +G +++A ++  ++  +GL  
Sbjct: 410 GFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEP 469

Query: 540 DHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
            H+ +  +   +    ++  A +I  +   R K
Sbjct: 470 KHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKK 502



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 130/258 (50%), Gaps = 3/258 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++  LC  GK+  ++ L  +M + G    + T N ++N  CK G + +A+  +  +++ 
Sbjct: 301 SLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQR 360

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TYN  + GY R+ ++ +A      MA  GI PN  T+N L+            
Sbjct: 361 GMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSV 420

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L E+    +    +DV+T  +L+ +    G+  +A+ L ++M +  ++   VAYN +
Sbjct: 421 SGLLDEM---KEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTI 477

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           INGFC  GD   A     +M KR    +V+TYN  L   CK GK+DEA+     + + G+
Sbjct: 478 INGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGL 537

Query: 363 APDQISYKTIIQGLCIHG 380
            P++I+Y+ I  G+   G
Sbjct: 538 VPNRITYEIINSGMIEKG 555



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 78/149 (52%), Gaps = 5/149 (3%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L  M++ G     ++ D   +  +I  LC  G++  A+ L  +M++ G  P  + +N ++
Sbjct: 424 LDEMKEKG-----VKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTII 478

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           N  C+ GD + A  +   M + +   N  TYN F+  +C++ ++D+A  + + M   G+ 
Sbjct: 479 NGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLV 538

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           PNR+T+ I+   + +KG + D   +  +V
Sbjct: 539 PNRITYEIINSGMIEKGYVPDISGYAADV 567


>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 191/407 (46%), Gaps = 3/407 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++   C  G +  AL   ++M  +G   DV+ +N LV  LC+ G+ + A  ++  M   
Sbjct: 206 ALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGD 265

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  TY  FI   CR N +D A  L+  M   G+ P+ VT + LV  LC+ G   +A
Sbjct: 266 GVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEA 325

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+   +   A  + +T   L+DS +K     ++  L  ++  + +  D+V Y  L
Sbjct: 326 YALFREM---EKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSL 382

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++     G I      F   L     P+ +TY  L++ LC+ G +D A      +    V
Sbjct: 383 MDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSV 442

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ +++ +II GL   G + KA +++  M E+ + P    +  ++DG+ +C +  +A  
Sbjct: 443 HPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALD 502

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   ML  GV  N F  + L+    + G + +A +L ++M   G+  D   Y  LI    
Sbjct: 503 LYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLF 562

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            +G++  A ++  E+  R ++PD + Y   +   C  G  KEAE + 
Sbjct: 563 KMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEAESIL 609



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 200/438 (45%), Gaps = 5/438 (1%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVP--DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           LC  G++  A  L   M++   +   DV+  N L++  CK GD+E A    + M      
Sbjct: 174 LCRDGQVEGAAALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVG 233

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
            +   YN  + G CR  E D A  +  TM  +G+ PN VT+   +   C+   + DA   
Sbjct: 234 VDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSL 293

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             E++         DV+T + L+D   + G   +A AL+ +M +     + V Y  LI+ 
Sbjct: 294 YEEMV---RMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDS 350

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
                  S +     +++ RG + D++ Y +L++ L KQGK+DE    +         P+
Sbjct: 351 LWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPN 410

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            ++Y  +I  LC  G++  A + LL M +KSV P    ++ II+G  + G L  A     
Sbjct: 411 GVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMR 470

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   G+  NV T+  ++    +      A  L  EML +G+  + F  +LL+      G
Sbjct: 471 KMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNG 530

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  A  L+ +M +RG+  D + YT LI G    GNM  A +V  ++    L+ D + + 
Sbjct: 531 KMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYN 590

Query: 546 ILKKRYRRMKESDKARDI 563
           +       + +S +A  I
Sbjct: 591 VFVNCLCMLGKSKEAESI 608



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 210/465 (45%), Gaps = 6/465 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGK-IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           +R +   D   +  VI  L   G+  G A  L  +M ++G   D +T N  +  LC+ G 
Sbjct: 120 LRASESADTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDGQ 179

Query: 169 LEKADHVIREMSEMRP--SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           +E A  +   M   R     +   +NA + GYC+  +++ AL     M   G+  + V +
Sbjct: 180 VEGAAALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGY 239

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           N LV  LC+ G   DA + + E +  D      +V+T T  +    +      A +L+ +
Sbjct: 240 NTLVAGLCRAGE-ADAARGMLETMKGDG--VEPNVVTYTTFIAECCRTNAVDDAFSLYEE 296

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +  +  D+V  + L++G C  G  S A+A F +M K G  P+ +TY TL++ L K  +
Sbjct: 297 MVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARR 356

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
             E+    G +   GV  D + Y +++  L   G I + ++     L  +  P    + V
Sbjct: 357 GSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTV 416

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +ID   R G++  A  +   M    V  NV TF+++I   T+ G +  A    ++M   G
Sbjct: 417 LIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERG 476

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           I P+V TY  ++           AL LY EML  G+  +      L+ G    G M+EAE
Sbjct: 477 IDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAE 536

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            +F  +   G+ +DH+ +  L     +M     A  + Q+   RN
Sbjct: 537 ALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERN 581



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 191/418 (45%), Gaps = 6/418 (1%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK-ALHL 210
           D L+ N ++   C +  L  A  ++R  SE   S +  +YN  I+G          A  L
Sbjct: 96  DPLSLNSILLSHCALRSLRPALALLRA-SE---SADTVSYNVVISGLTEQGRHGGLAPAL 151

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
            + M   G+  + VT N  + ALC+ G +  A   L E++         DV+    L+D 
Sbjct: 152 LAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAA-LAEMMVRGREIHRLDVVGWNALLDG 210

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           Y K+GD   AL     M  + +  D+V YN L+ G C  G+  +A      M   G  P+
Sbjct: 211 YCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPN 270

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+TY T +   C+   +D+A   Y  + + GV PD ++   ++ GLC  G   +A     
Sbjct: 271 VVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFR 330

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M +    P    +  +ID   +    S +  +   ++S GV  ++  + +L+    + G
Sbjct: 331 EMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQG 390

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            I +   +    L D   P+  TY +LI A C  G++  A Q+  EM  + + P+++T++
Sbjct: 391 KIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFS 450

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
            +I G   +G + +A +   K++  G+  + + +  +   + + +E + A D++ + L
Sbjct: 451 SIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEML 508



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 165/358 (46%), Gaps = 43/358 (12%)

Query: 101 LKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLV 160
           L+TM+  G     +E +   +   I + C    +  A  L  +M++ G +PDV+T + LV
Sbjct: 259 LETMKGDG-----VEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALV 313

Query: 161 NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR 220
           + LC+ G   +A  + REM ++  +PN  TY   I    +     ++  L   + + G+ 
Sbjct: 314 DGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVV 373

Query: 221 PNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQA 280
            + V +  L+  L K+G + +        L+D+    T + +T T+L+D+  + G+   A
Sbjct: 374 MDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNH---TPNGVTYTVLIDALCRAGNVDGA 430

Query: 281 LALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT---- 336
             +  +M  K++  ++V ++ +ING    G +  A  Y  +M +RG  P+V+TY T    
Sbjct: 431 EQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDG 490

Query: 337 -------------------------------LLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
                                          L+N L K GK++EA   +  ++K G+  D
Sbjct: 491 FFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLD 550

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            ++Y T+I GL   G++  A +    + E+++ P+  ++NV ++     G    A SI
Sbjct: 551 HVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEAESI 608


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 217/453 (47%), Gaps = 5/453 (1%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L+ +  M D G    T   +   +  VI  LC    +  A  + + MI KG  P+  
Sbjct: 181 EEALELMHMMADDGDGSHT--PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNH 238

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  L++     G  ++   +++EMS     P+C  Y   +   C+     +A ++F ++
Sbjct: 239 TYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSL 298

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              GI+P+   + IL+H    +G L +   FL  ++ +     + D     I+ ++Y K 
Sbjct: 299 IRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNG---VSPDHHIFNIMFNAYAKK 355

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
               +A+ +++ M Q+ +   +V Y  LI+  C  G +  A   F QM+  G  PD+  +
Sbjct: 356 AMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVF 415

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           ++L+  LC   K ++A   +  +   G+  +   +  ++  LC  G +++A+  +  ML 
Sbjct: 416 SSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLR 475

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             V P+   +N ++DG+   G +  A  + D+M+S G+  + FT+N L+    +   I D
Sbjct: 476 VDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDD 535

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A+SL +EML+ G+ P V TYN ++     +G    A +LY  M+      DI TYT ++ 
Sbjct: 536 AYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILN 595

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           G C    + EA ++F  + +  L +D     I+
Sbjct: 596 GLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIM 628



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 197/424 (46%), Gaps = 3/424 (0%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M++ G  PD    N + N   K   +++A H+  +M +   SP    Y A I   C++  
Sbjct: 333 MVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGR 392

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           +D A+  F+ M N G+ P+    + LV+ LC       A K   EVL   D     +   
Sbjct: 393 VDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVL---DQGIRLNAAF 449

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             ILM +  + G   +A  L + M + +++ D+++YN L++G CL G I  A      M+
Sbjct: 450 FNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMV 509

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
             G  PD  TYNTLL+  CK  ++D+A   +  +   G+ P  ++Y TI+ GL   G   
Sbjct: 510 SIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFC 569

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A+E  L+M+      + + + +I++G  R   +  AF +   + S  +  ++FT N +I
Sbjct: 570 EAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMI 629

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            A  +GG   DA  L   +   G+ PDV TY L+       G +    +L+  M   G  
Sbjct: 630 GALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTA 689

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P+      L++    RG++  A    +K+     +++     +L   Y R +    A+ +
Sbjct: 690 PNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRAEYQQLAKSL 749

Query: 564 HQKW 567
            +K+
Sbjct: 750 PEKY 753



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 206/468 (44%), Gaps = 40/468 (8%)

Query: 143 KMIQKGTV---PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS-PNCATYNAFITGY 198
           +MI++ +V   P   T+  L+   C++G L+        + +   S  N   +   + G 
Sbjct: 79  RMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGL 138

Query: 199 CRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA 257
           C    +D+A   L   M   G   N +++NIL+  LC +    +A++ +  +  D DG  
Sbjct: 139 CDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSH 198

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
           T +V+T T ++D   K     +A  ++  M  K ++ +   Y  LI+G+   G       
Sbjct: 199 TPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQ 258

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
              +M   G  PD + Y  LL+ LCK G+  EA + +  L + G+ P    Y  ++ G  
Sbjct: 259 MLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYA 318

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
             G + +   FL  M+   V P+ HI+N++ + Y +   +  A  I D M    +S  V 
Sbjct: 319 TEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVV 378

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY----------------------- 474
            + ALI A  + G + DA     +M+ +G+ PD+F +                       
Sbjct: 379 NYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEV 438

Query: 475 ------------NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
                       N+L+   C  G +  A +L D MLR  + PD+I+Y  L+ GHC  G +
Sbjct: 439 LDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRI 498

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
            EA ++   + ++GL  D   +  L   Y + +  D A  + ++ L++
Sbjct: 499 DEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMK 546



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 133/300 (44%), Gaps = 12/300 (4%)

Query: 281 LALWNDMFQK---NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF-LPDVITYNT 336
           ++L+N M ++    +      Y +LI  FC  G +   FA F  +LK G+ L + + +  
Sbjct: 74  VSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQ 133

Query: 337 LLNCLCKQGKLDEASH-FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           LL  LC   ++DEA+      + + G   + ISY  +++GLC      +A E +  M + 
Sbjct: 134 LLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADD 193

Query: 396 ---SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
              S  P    +  +IDG  +   +  A  +   M+  GV  N  T+  LI      G  
Sbjct: 194 GDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKW 253

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +   + +EM   G+ PD   Y +L+   C  G    A  ++D ++R+GI P +  Y  L
Sbjct: 254 KEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGIL 313

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI----HQKWL 568
           + G+   G + E       +   G++ DH  F I+   Y +    D+A  I     Q+WL
Sbjct: 314 LHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWL 373



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 3/230 (1%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   L+ D   +  ++   C   +I  A  L R+M+ KG  P V+T+N +++ L +IG  
Sbjct: 509 VSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRF 568

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
            +A  +   M   R   +  TY   + G CR N +D+A  +F ++ +  ++ +  T NI+
Sbjct: 569 CEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIM 628

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           + AL K G   DA+     + A        DV T  ++ ++  K G   +   L++ M +
Sbjct: 629 IGALLKGGRKEDAMDLFATISAYG---LVPDVETYRLIAENLIKEGSLEELDELFSAMEE 685

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
                +    N L+      GDI  A  Y  ++ ++ F  +  T + L++
Sbjct: 686 NGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLIS 735


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 208/409 (50%), Gaps = 10/409 (2%)

Query: 100 RLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYL 159
           RL  +R   P+ C +E   +   +++R     G   T ++L +++   G   D+ + + L
Sbjct: 51  RLMLLRK--PLPCIVEFS-KLFSSIVR----MGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
           +N  C +  ++    V+ ++ ++   P+  T+   + G C   ++D+ + L+  M   G+
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
           +PN  T+N+++++L K G   +A+ FL ++   +      +V+  + L+D Y   G   +
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQM---EKVGCVPNVVNYSTLIDGYCLRGQMDE 220

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           A ++++ M  K    ++  Y  L+NG+C    I  A     + L++G +PD++T+ T+++
Sbjct: 221 ARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIIS 280

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            LC+ G+   A   +  +   G  P+ ++Y  ++ GLC HG++ +A      M   +V P
Sbjct: 281 GLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKP 340

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLK 459
              I+ ++ID   +CG + +   +   ++  G+  NV+T+ AL+ A  + G I +A  L 
Sbjct: 341 NLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLF 400

Query: 460 KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
           ++M  DG  PD   YN++I          +A QL +EM+ RG + D  T
Sbjct: 401 RKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 199/404 (49%), Gaps = 3/404 (0%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL   R M+ +  +P ++  + L + + ++G  E   ++ +E+  +    +  + +  I 
Sbjct: 46  ALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILIN 105

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            +C ++ +D  L + S +   G+ P+ VT   L++ LC +G +   +    ++L      
Sbjct: 106 CFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRG--- 162

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              +V T  ++++S  K+G   +AL     M +     ++V Y+ LI+G+CL G +  A 
Sbjct: 163 LQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEAR 222

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           + F  M+ +G  P+V TY +L+N  CK  +++EA        + G+ PD +++ TII GL
Sbjct: 223 SVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGL 282

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G  + A++    +      P    + V++DG  + G+L  AF++   M    V  N+
Sbjct: 283 CRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNL 342

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
             +  LI +  + G I D   L   ++ +G+ P+V+TY  L+GA C  G I  A +L+ +
Sbjct: 343 VIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRK 402

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           M   G TPD   Y  +I+G     +   A ++  ++   G + D
Sbjct: 403 MEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSAD 446



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 4/200 (2%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           +R  L  D      +I  LC  G+   A  L R +   G  P+++T+  L++ LCK G+L
Sbjct: 264 LRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNL 323

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           E+A  + +EM      PN   Y   I   C+  ++     LFS + + G++PN  T+  L
Sbjct: 324 EEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTAL 383

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           V ALCK+GL+ +A K   ++  ++DG  T D     +++  + ++ D   A  L  +M  
Sbjct: 384 VGALCKEGLIIEAHKLFRKM--EEDG-CTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVN 440

Query: 290 KNIQTDIVAYNVLINGFCLN 309
           +    D  A   L+N F  N
Sbjct: 441 RGFSAD-AATRALLNDFPTN 459


>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
 gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
          Length = 455

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 180/386 (46%), Gaps = 39/386 (10%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           MI+ G +PD  ++ +LVN LCK G++  A  ++ +M E     N  TYN+ + G C    
Sbjct: 11  MIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGN 70

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           L+++L L   +   G+ PN  T++ L+ A  K+  + +A+K L E++A            
Sbjct: 71  LNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIA------------ 118

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
                                     K  Q ++V+YNVL+ G C  G    A  +F  + 
Sbjct: 119 --------------------------KGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLP 152

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            +GF P+V++YN +L  LC +G+ +EA+     +     +P  ++Y  +I  L  HG I 
Sbjct: 153 SKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIE 212

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
            A E L  M+  S  P    +N II    + G L       D M+    + N  TFNA+ 
Sbjct: 213 HAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAIA 272

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
           +   + G + +AFS+ + +           Y  +I + C  G+ + A QL  EM + G  
Sbjct: 273 VL-CKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFV 331

Query: 504 PDIITYTELIKGHCARGNMKEAEEVF 529
           PD  TY+ LI+G C  G + EA E+F
Sbjct: 332 PDPYTYSSLIRGLCIEGMLDEALEIF 357



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 180/380 (47%), Gaps = 4/380 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++R LC+ G +  +L L  K++ KG VP+  T+++L+    K   + +A  ++ E+   
Sbjct: 60  SLVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAK 119

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  +YN  +TG C+    ++A+  F  + + G  PN V++NI++ +LC +G   +A
Sbjct: 120 GWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEA 179

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + L E+   D  + +  ++T  IL+ S   +G    A  + ++M + + +     YN +
Sbjct: 180 NQLLAEM---DSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPI 236

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I   C  G +        QM+     P+  T+N +   LCKQG++ EA      L     
Sbjct: 237 IAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAIA-VLCKQGRVPEAFSIIQNLGNKQR 295

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           +     YK +I  LC  G+   A + L  M +   VP+P+ ++ +I G    G L  A  
Sbjct: 296 SSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALE 355

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I  L+        +  FNALIL   + G    +  + + M+  G  P+  TY +++    
Sbjct: 356 IFRLLEENDYRPILDNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIA 415

Query: 483 NLGHIHLALQLYDEMLRRGI 502
           +     LA ++  E+L R +
Sbjct: 416 HEEEKELAAEVLKELLLRQV 435



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 125/275 (45%), Gaps = 4/275 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC  G+   A  L  +M  +   P ++T+N L+  L   G +E A  V+ EM    
Sbjct: 166 ILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRAS 225

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYN  I   C+  +LD  +     M ++   PN  T N +   LCK+G + +A 
Sbjct: 226 FKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAIA-VLCKQGRVPEAF 284

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             + + L +    +T D     I   S  + G+ + A  L  +M +     D   Y+ LI
Sbjct: 285 SII-QNLGNKQRSSTHDFYKGVI--TSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLI 341

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G C+ G +  A   F  + +  + P +  +N L+   CK G+ D +     ++ + G  
Sbjct: 342 RGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKSGRTDLSLDILEMMVEKGYT 401

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           P++ +Y  I++G+    +   A E L  +L + V+
Sbjct: 402 PNETTYTIIVEGIAHEEEKELAAEVLKELLLRQVM 436



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 103/201 (51%)

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           + +A+    ++ ++G+ PD  SY  ++  LC  G+I  A + +  M E         +N 
Sbjct: 1   MKKATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNS 60

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           ++ G    G+L+ +  + D ++  G+  N FT++ L+ A  +   + +A  L  E++  G
Sbjct: 61  LVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKG 120

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             P++ +YN+L+   C  G    A++ + ++  +G  P++++Y  +++  C  G  +EA 
Sbjct: 121 WQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEAN 180

Query: 527 EVFAKIQTLGLAIDHIPFRIL 547
           ++ A++ +   +   + + IL
Sbjct: 181 QLLAEMDSEERSPSLVTYNIL 201


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 201/413 (48%), Gaps = 8/413 (1%)

Query: 131 GGKIGTALWLRRKMIQKGTVP---DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
            G++  A  L  + +  G+ P     L  + +V+ LCK G ++ A  ++ +M     S N
Sbjct: 154 AGRLADAAGLLERAL--GSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLN 211

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
              YN+ +  Y R  +  +   +   M N GI     T+ ILV +L     +        
Sbjct: 212 ALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFN 271

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E+ A++      DV   T ++++Y + G+  +A  + ++     ++ +   Y VLINGFC
Sbjct: 272 EMKANN---VVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFC 328

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G + +A      M  +G   + I +NT+++  C++G +D+A      + K GV  D  
Sbjct: 329 KIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIY 388

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y T+  GLC    + +A+  L  M+E  VVP    +  +I  + + GD+  A  +   M
Sbjct: 389 TYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREM 448

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              G + +V T+N +I   T+ GSI +A   +KEM   G  PDV+TY  L+   C  G +
Sbjct: 449 AEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKV 508

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            +AL+L++EM +RG  P+++ YT LI G    G  + A +++  +   GL  D
Sbjct: 509 DVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPD 561



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 179/390 (45%), Gaps = 3/390 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC  G++  A  L   M + G   + L +N L++   +  D  +   ++  M    
Sbjct: 183 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 242

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
                 TY   +       ++ K   LF+ M  N +  +   +  +++A C+ G +  A 
Sbjct: 243 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 302

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L E + +       +  T  +L++ + K G    A  L  DM  + +  + + +N +I
Sbjct: 303 KVLDECVGNG---VEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMI 359

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+C  G +  A      M K G   D+ TYNTL   LC+  +LDEA     ++ + GV 
Sbjct: 360 DGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVV 419

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+ ++Y T+I   C  GD+V+AR     M EK   P    +NV+IDGY + G +  A   
Sbjct: 420 PNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERF 479

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
           R  M   G   +V+T+ +L+      G +  A  L +EM   G  P+V  Y  LI     
Sbjct: 480 RKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAK 539

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELI 513
            G    A QLYD+ML+ G+ PD   Y+ L+
Sbjct: 540 EGRSEAAFQLYDDMLKAGLIPDDSLYSALV 569



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 181/384 (47%), Gaps = 5/384 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           SP  A+    + G C+   +D A  L   M  +G+  N + +N L+    ++   G   +
Sbjct: 176 SPLAAS--VVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQE 233

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
            L E++ ++  +AT  V T TIL+DS     D  +  AL+N+M   N+  D+  Y  +IN
Sbjct: 234 IL-EIMENEGIEAT--VGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVIN 290

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
            +C  G++  A     + +  G  P+  TY  L+N  CK G+++ A      +   GV  
Sbjct: 291 AYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGL 350

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           +QI + T+I G C  G +  A +   +M +  V  + + +N +  G  R   L  A ++ 
Sbjct: 351 NQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLL 410

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
            +M+  GV  N  T+  LI    + G + +A  L +EM   G  P V TYN++I      
Sbjct: 411 HIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKK 470

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G I  A +   EM ++G  PD+ TY  L+ GHC  G +  A ++F +++  G   + + +
Sbjct: 471 GSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAY 530

Query: 545 RILKKRYRRMKESDKARDIHQKWL 568
             L     +   S+ A  ++   L
Sbjct: 531 TALISGLAKEGRSEAAFQLYDDML 554



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 94/221 (42%), Gaps = 38/221 (17%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC   ++  A  L   MI+ G VP+ +T+  L++  CK GD+ +A  + REM+E   +P+
Sbjct: 397 LCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPS 456

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TYN  I GY +   + +A      M   G  P+  T+  LVH  C             
Sbjct: 457 VVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHC------------- 503

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
                                     NG    AL L+ +M Q+  + ++VAY  LI+G  
Sbjct: 504 -------------------------VNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLA 538

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
             G   +AF  +  MLK G +PD   Y+ L+  L    + D
Sbjct: 539 KEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKD 579



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 7/223 (3%)

Query: 345 GKLDEASHFYGVLSKT-GVAPDQIS---YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           G+L +A+   G+L +  G  P  +S      ++ GLC  G +  AR  L  M    V   
Sbjct: 155 GRLADAA---GLLERALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLN 211

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
              +N ++D Y R  D      I ++M + G+ + V T+  L+ + +    I    +L  
Sbjct: 212 ALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFN 271

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           EM  + +  DV+ Y  +I A C  G++  A ++ DE +  G+ P+  TY  LI G C  G
Sbjct: 272 EMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIG 331

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            M+ AE + A +Q  G+ ++ I F  +   Y R    D A  I
Sbjct: 332 QMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKI 374


>gi|359488082|ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Vitis vinifera]
          Length = 498

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 194/410 (47%), Gaps = 5/410 (1%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D  T+N ++  LC  G L  A  +I  M+     P   +    I G  ++   ++A  + 
Sbjct: 38  DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 97

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M  +G  P+ +T+N+LV  LCKKGLL  A++ L E+          D IT   ++   
Sbjct: 98  KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEM---SLSGCPPDAITYNTILRCM 154

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
           F +G   QA+  W D  +K     ++ Y VLI   C +     A      M   G  PD+
Sbjct: 155 FDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDI 214

Query: 332 ITYNTLLNCLCKQGKL-DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           +TYN+L+N  CKQGK  D A   Y +LS  G+ P+ ++Y T++  LC HG   +  E LL
Sbjct: 215 VTYNSLVNYTCKQGKYEDTALIIYNLLSH-GMGPNTVTYNTLLHSLCTHGYWDEVDEILL 273

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M   S  P    +N++I+G  + G L  A +  D M+S     ++ T+N L+ A  + G
Sbjct: 274 IMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEG 333

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A  L   +      P + TYN++I      G +  A++LY EM+ RG  PD IT+ 
Sbjct: 334 MVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHR 393

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
            L  G      +++A  +  ++      I +  FR +     + K+ D A
Sbjct: 394 TLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIA 443



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 193/447 (43%), Gaps = 38/447 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++++LC  GK+  A  L   M ++  +P   +   L+  L K+   E+A  V++ M    
Sbjct: 45  ILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIMVMSG 104

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TYN  + G C+   L  A+ L   M+ +G  P+ +T+N ++  +   G    A+
Sbjct: 105 GIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGFDQAI 164

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            F  + L        + +IT T+L++   K+    QA+ +  DM  +    DIV YN L+
Sbjct: 165 GFWKDQLRKG---CPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLV 221

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           N  C  G           +L  G  P+ +TYNTLL+ LC  G  DE      +++ T   
Sbjct: 222 NYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQP 281

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P  ++Y  +I GLC +G + +A  F   M+  + +P+   +N ++    + G +  A  +
Sbjct: 282 PTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHL 341

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLL------ 477
              +     S  + T+N +I    + G +  A  L  EM+  G  PD  T+  L      
Sbjct: 342 LHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFR 401

Query: 478 -----------------------------IGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
                                        I   C    + +A+Q+ + M+     P+   
Sbjct: 402 LDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEMMVSSQCKPNEEI 461

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTL 535
           Y+ +IKG  A G ++EA ++  K+  L
Sbjct: 462 YSAIIKGVGAAGMIEEANQLHQKLTEL 488



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 138/289 (47%), Gaps = 6/289 (2%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   + +++   C  GK      +   ++  G  P+ +T+N L++ LC  G  ++ D ++
Sbjct: 213 DIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEIL 272

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M+     P   TYN  I G C+   LD+A++ F  M ++   P+ +T+N L+ ALCK+
Sbjct: 273 LIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKE 332

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G++ +A+  L  +   +D + +  +IT  I++D   K G   +A+ L+ +M ++    D 
Sbjct: 333 GMVDEALHLLHSL---NDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDD 389

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + +  L  G      +  A     +M KR        +  +++ LCK+ K+D A     +
Sbjct: 390 ITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEM 449

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE---PH 402
           +  +   P++  Y  II+G+   G I +A +    + E  V  E   PH
Sbjct: 450 MVSSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKLTELKVFREETMPH 498


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 169/350 (48%), Gaps = 3/350 (0%)

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
            +  + + G   N    NIL++  CK+G + DA K   E+           V++   L++
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR---SLQPTVVSFNTLIN 283

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
            Y K G+  +   L + M +   + D+  Y+ LIN  C    +  A   F +M KRG +P
Sbjct: 284 GYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIP 343

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           + + + TL++   + G++D     Y  +   G+ PD + Y T++ G C +GD+V AR  +
Sbjct: 344 NDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIV 403

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M+ + + P+   +  +IDG+ R GD+  A  IR  M   G+  +   F+AL+    + 
Sbjct: 404 DGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE 463

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G + DA    +EML  GI PD  TY +++ A C  G      +L  EM   G  P ++TY
Sbjct: 464 GRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTY 523

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDK 559
             L+ G C  G MK A+ +   +  +G+  D I +  L + + R   S K
Sbjct: 524 NVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 188/389 (48%), Gaps = 14/389 (3%)

Query: 98  LDRLKTMRDTGPV----RCTLETDYRRHVAV----IRDLCLGGKIGTALWLRRKMIQKGT 149
           LDR+  +  TG +       L+  +  +V V    +   C  G I  A  +  ++ ++  
Sbjct: 212 LDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSL 271

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P V++ N L+N  CK+G+L++   +  +M + R  P+  TY+A I   C+ N++D A  
Sbjct: 272 QPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHG 331

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           LF  M   G+ PN V    L+H   + G +    +   ++L+        D++    L++
Sbjct: 332 LFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG---LQPDIVLYNTLVN 388

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
            + KNGD   A  + + M ++ ++ D + Y  LI+GFC  GD+ +A     +M + G   
Sbjct: 389 GFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL 448

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           D + ++ L+  +CK+G++ +A      + + G+ PD ++Y  ++   C  GD     + L
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLL 508

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M     VP    +NV+++G  + G + NA  + D ML+ GV  +  T+N L+    R 
Sbjct: 509 KEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRH 568

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            +    +  K E+   GI  D+ +Y  ++
Sbjct: 569 ANSSKRYIQKPEI---GIVADLASYKSIV 594



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 144/312 (46%), Gaps = 39/312 (12%)

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
           L+D   K          + ++       ++  +N+L+N FC  G+IS A   F ++ KR 
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLC--------- 377
             P V+++NTL+N  CK G LDE       + K+   PD  +Y  +I  LC         
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330

Query: 378 ---------------------IH-----GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGY 411
                                IH     G+I   +E    ML K + P+  ++N +++G+
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390

Query: 412 GRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
            + GDL  A +I D M+  G+  +  T+  LI    RGG +  A  ++KEM  +GI  D 
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
             ++ L+   C  G +  A +   EMLR GI PD +TYT ++   C +G+ +   ++  +
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510

Query: 532 IQTLGLAIDHIP 543
           +Q+ G    H+P
Sbjct: 511 MQSDG----HVP 518



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 100/214 (46%)

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
           FY  +   G   +   +  ++   C  G+I  A++    + ++S+ P    +N +I+GY 
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           + G+L   F ++  M       +VFT++ALI A  +   +  A  L  EM   G+ P+  
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            +  LI      G I L  + Y +ML +G+ PDI+ Y  L+ G C  G++  A  +   +
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
              GL  D I +  L   + R  + + A +I ++
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKE 440



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 68/142 (47%)

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
           +L  G   NV+ FN L+    + G+I DA  +  E+    + P V ++N LI   C +G+
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           +    +L  +M +    PD+ TY+ LI   C    M  A  +F ++   GL  + + F  
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350

Query: 547 LKKRYRRMKESDKARDIHQKWL 568
           L   + R  E D  ++ +QK L
Sbjct: 351 LIHGHSRNGEIDLMKESYQKML 372


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 207/421 (49%), Gaps = 5/421 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  VI  +   G + +AL +  +M ++G VPDV+ +N +++   K GD  +  
Sbjct: 180 LKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGK 239

Query: 174 HVIREMSEMR-PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
            +   + +     PN  TYN  I G C++   D++L ++  M  N    +  T++ L+  
Sbjct: 240 EIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICG 299

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LC  G +  AV+   E++         DV+T   L++ + + G   ++  LW  M ++N 
Sbjct: 300 LCDVGNVDGAVEVYKEMVKRS---VVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENC 356

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             ++V+YN+ I G   N  +  A + +  + +RG   D  TY  L++ LCK G L++A  
Sbjct: 357 H-NVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALK 415

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
                   G   D  +Y +I+ GL   G + +A   +  M +      PH+ N +I+G+ 
Sbjct: 416 ILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFV 475

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           R   L  A      M + G S  V ++N LI    +     DA+S  KEML     PD+ 
Sbjct: 476 RASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMI 535

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TY+LL+   C    I +AL L+ ++L +G+ PD+  +  L+ G C+ G +++A  +++ +
Sbjct: 536 TYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNM 595

Query: 533 Q 533
           +
Sbjct: 596 K 596



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 198/436 (45%), Gaps = 4/436 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I  LC  G+   +L +  +M +     D+ T++ L+  LC +G+++ A  V +EM + 
Sbjct: 260 VMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKR 319

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +  TYNA + G+CR  ++ ++  L+  M       N V++NI +  L +   + +A
Sbjct: 320 SVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEA 378

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  + E+L      A  D  T  +L+    KNG   +AL +  +      + D  AY+ +
Sbjct: 379 IS-VWELLRRRGSGA--DSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSI 435

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G    G +  A     QM K G        N L+N   +  KL+EA  F+  +   G 
Sbjct: 436 VDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGC 495

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
           +P  +SY T+I GLC       A  F+  MLEK   P+   +++++DG  +   +  A +
Sbjct: 496 SPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALN 555

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   +L  G+  +V   N L+      G I DA  L   M      P++ T+N L+    
Sbjct: 556 LWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLY 615

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
                 +A  ++  M + G  PDII+Y   +KG C+ G + +   +F      G+    I
Sbjct: 616 KARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSI 675

Query: 543 PFRILKKRYRRMKESD 558
            + IL +   ++   D
Sbjct: 676 TWYILVRAVLKLGPLD 691



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 198/417 (47%), Gaps = 9/417 (2%)

Query: 135 GTALWLRRKMIQKGTV--PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           G  +W R   + KG+   P+V+T+N ++N LCK+G  +++  +   M +     +  TY+
Sbjct: 238 GKEIWER---LVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYS 294

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
           + I G C V  +D A+ ++  M    +  + VT+N L++  C+ G + ++     E+   
Sbjct: 295 SLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESF----ELWVM 350

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
              +   +V++  I +   F+N    +A+++W  + ++    D   Y VLI+G C NG +
Sbjct: 351 MGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHL 410

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           + A     +    G   D   Y+++++ L KQG++DEA      + K G          +
Sbjct: 411 NKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPL 470

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I G      + +A  F   M  K   P    +N +I+G  +    S+A+S    ML    
Sbjct: 471 INGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDW 530

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             ++ T++ L+    +G  I  A +L +++L+ G+ PDV  +N+L+   C+ G I  AL 
Sbjct: 531 KPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALL 590

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           LY  M +    P+++T+  L+ G       + A  ++A +   G   D I + I  K
Sbjct: 591 LYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLK 647



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 190/411 (46%), Gaps = 45/411 (10%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E D   + ++I  LC  G +  A+ + ++M+++  V DV+T+N L+N  C+ G ++++  
Sbjct: 287 EMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKES-- 344

Query: 175 VIREMSEMRPSPNC---ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
              E+  M    NC    +YN FI G     ++++A+ ++  +   G   +  T+ +L+H
Sbjct: 345 --FELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIH 402

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG------------DKF- 278
            LCK G L  A+K L E     DG    D    + ++D   K G            DK+ 
Sbjct: 403 GLCKNGHLNKALKILKEA---KDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYG 459

Query: 279 ----------------------QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
                                 +A+  + +M  K     +V+YN LING C     S A+
Sbjct: 460 CELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAY 519

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
           ++  +ML++ + PD+ITY+ L++ LC+  K+D A + +  +   G+ PD   +  ++ GL
Sbjct: 520 SFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGL 579

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G I  A     +M + + +P     N ++DG  +  +   A  I   M   G   ++
Sbjct: 580 CSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDI 639

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
            ++N  +      G I D  +L  + L +GI P   T+ +L+ A   LG +
Sbjct: 640 ISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPL 690



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 148/304 (48%), Gaps = 3/304 (0%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
            D   +  +I  LC  G +  AL + ++    G   D   ++ +V+ L K G +++A  +
Sbjct: 392 ADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGI 451

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           + +M +     +    N  I G+ R ++L++A+  F  M   G  P  V++N L++ LCK
Sbjct: 452 VHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCK 511

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
                DA  F+ E+L  D      D+IT ++LMD   +      AL LW  +  K ++ D
Sbjct: 512 AERFSDAYSFVKEMLEKD---WKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPD 568

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
           +  +N+L++G C  G I  A   +  M +   LP+++T+NTL++ L K  + + AS  + 
Sbjct: 569 VTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWA 628

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + K G  PD ISY   ++GLC  G I          L+  ++P    W +++    + G
Sbjct: 629 CMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLG 688

Query: 416 DLSN 419
            L +
Sbjct: 689 PLDS 692



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 190/470 (40%), Gaps = 73/470 (15%)

Query: 148 GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA 207
           G  P + ++N L+N   +   LEKA+  +     +   PN  TYN  I    +  +  +A
Sbjct: 109 GCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEA 168

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             L   M +  ++P+  ++  +++ + K G L  A++   E+    +     DV+   I+
Sbjct: 169 KGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMF---ERGLVPDVMCYNIM 225

Query: 268 MDSYFKNGDKFQALALWNDMFQKN-IQTDIVAYNVLINGFCLN----------------- 309
           +D +FK GD  Q   +W  + + + +  ++V YNV+ING C                   
Sbjct: 226 IDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNE 285

Query: 310 ------------------GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL---- 347
                             G++  A   + +M+KR  + DV+TYN LLN  C+ GK+    
Sbjct: 286 CEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESF 345

Query: 348 ------------------------------DEASHFYGVLSKTGVAPDQISYKTIIQGLC 377
                                         +EA   + +L + G   D  +Y  +I GLC
Sbjct: 346 ELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLC 405

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
            +G + KA + L    +     +   ++ I+DG  + G +  A  I   M  +G   +  
Sbjct: 406 KNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPH 465

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
             N LI    R   + +A    +EM   G  P V +YN LI   C       A     EM
Sbjct: 466 VCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEM 525

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           L +   PD+ITY+ L+ G C    +  A  ++ ++   GL  D     IL
Sbjct: 526 LEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNIL 575



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 111/221 (50%), Gaps = 3/221 (1%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
             K+  A+   R+M  KG  P V+++N L+N LCK      A   ++EM E    P+  T
Sbjct: 477 ASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMIT 536

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y+  + G C+  ++D AL+L+  +   G+ P+   HNIL+H LC  G + DA+     + 
Sbjct: 537 YSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNM- 595

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                    +++T   LMD  +K  +   A  +W  MF+   Q DI++YN+ + G C  G
Sbjct: 596 --KQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCG 653

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEAS 351
            IS   A F   LK G LP  IT+  L+  + K G LD  S
Sbjct: 654 RISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDSLS 694



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 147/289 (50%), Gaps = 12/289 (4%)

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-----NIQTDIVAYNVL 302
           E++     K T DV+ +  ++ +Y K+    +AL    D FQK       +  I +YN L
Sbjct: 67  ELIKTQKCKCTEDVVLT--VLKAYAKSKMPNEAL----DCFQKMEEIFGCKPGIRSYNAL 120

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +N F     +  A ++       G LP++ TYN L+    K+ +  EA      +    +
Sbjct: 121 LNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDL 180

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  SY T+I G+   GD+V A E    M E+ +VP+   +N++IDG+ + GD      
Sbjct: 181 KPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKE 240

Query: 423 IRDLMLSFG-VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           I + ++    V  NV T+N +I    + G   ++  + + M  +    D+FTY+ LI   
Sbjct: 241 IWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGL 300

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           C++G++  A+++Y EM++R +  D++TY  L+ G C  G +KE+ E++ 
Sbjct: 301 CDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWV 349



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 121/249 (48%), Gaps = 6/249 (2%)

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  P + +YN LLN   +   L++A  F       G+ P+  +Y  +I+        V+A
Sbjct: 109 GCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEA 168

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           +  L  M  K + P+ + +  +I+G  + GDL +A  + D M   G+  +V  +N +I  
Sbjct: 169 KGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDG 228

Query: 446 ETRGGSIFDAFSLKKEMLLDG--IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
             + G       +  E L+ G  ++P+V TYN++I   C +G    +L++++ M +    
Sbjct: 229 FFKRGDYVQGKEIW-ERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECE 287

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            D+ TY+ LI G C  GN+  A EV+ ++    + +D + +  L   + R   + K ++ 
Sbjct: 288 MDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCR---AGKIKES 344

Query: 564 HQKWLLRNK 572
            + W++  K
Sbjct: 345 FELWVMMGK 353



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 61/126 (48%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           LE D   H  ++  LC  GKI  AL L   M Q   +P+++THN L++ L K  + E A 
Sbjct: 565 LEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMAS 624

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M +    P+  +YN  + G C    +   + LF     NGI P  +T  ILV A+
Sbjct: 625 VIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAV 684

Query: 234 CKKGLL 239
            K G L
Sbjct: 685 LKLGPL 690


>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
 gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
          Length = 798

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 207/448 (46%), Gaps = 26/448 (5%)

Query: 123 AVIRDLCL-GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           AV+R L   GG +  AL L  +M+  G +P+  T+N L++ LCK G    A  +  EM +
Sbjct: 178 AVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQ 237

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
              +PN  T+   ++  C   +L +A +L ++M + G  P+ VT+N  +  LCK G + +
Sbjct: 238 RGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDE 297

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF-QKNIQTDIVAYN 300
           A++ L  +     G     +   + L+D  F  G   +    + ++  Q +   DIV Y 
Sbjct: 298 AIERLEAL--RRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYT 355

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           ++I G    G I  AFA+F +M ++ F PD   YNTLL  LC  G LD A      +++ 
Sbjct: 356 IMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQN 415

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
            V  D  ++  +I GLC    + +A +    M+E    P    +NV+IDG  R   L  A
Sbjct: 416 NVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEA 475

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
              R L     V +N   F  L L   +   + D+ SL+K                L+ +
Sbjct: 476 ---RMLFYKMEVGNNPSLFLRLTLGANQ---VKDSESLQK----------------LVDS 513

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  G +  A +L   ++  G+ PD++TY  L+ G C   N+  A  +F ++Q  G ++D
Sbjct: 514 MCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLD 573

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWL 568
            I +  L     R    + A  + Q  L
Sbjct: 574 EITYGTLIDSLLRAHRYNDAMTLFQDIL 601



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 111/474 (23%), Positives = 211/474 (44%), Gaps = 62/474 (13%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  G    AL L  +M+Q+G  P+V TH  L++ +C  G L++A++++  M +    P+
Sbjct: 219 LCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPD 278

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNG----------------------------- 218
             TYNAF++G C+   +D+A+     +   G                             
Sbjct: 279 EVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCY 338

Query: 219 --------IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
                     P+ V + I++    + G + DA  F  E+    + + T D      L+ +
Sbjct: 339 MEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEM---KEKRFTPDTFCYNTLLKA 395

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
              +GD   A +L ++M Q N+  D   + ++I+G C    +  A   F  M++ G  P 
Sbjct: 396 LCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPT 455

Query: 331 VITYNTLLNCLCKQGKLDEA-------------SHFYGVLSKTGVAPDQISYKTIIQGLC 377
           V+TYN L++ L +  +L+EA             S F  +        D  S + ++  +C
Sbjct: 456 VMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMC 515

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNV 436
             G ++KA + L  +++  VVP+   +N +++G  +  +L  A  + R+L +  G S + 
Sbjct: 516 QSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVK-GFSLDE 574

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQL-YD 495
            T+  LI +  R     DA +L +++L  G  P +  YN ++ + C +  +  A+   +D
Sbjct: 575 ITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWFD 634

Query: 496 EMLRRGITPDIITYTELI---KGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
            +L++    ++    E+I   +     G++ EA     KI     +++  P+ I
Sbjct: 635 HLLKKY---NLSAQDEVIASARKKFEEGSLDEAVRELIKIDQEYGSVNSCPYTI 685



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 158/356 (44%), Gaps = 3/356 (0%)

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G++P       L+ A    G   +AV     +  +   + T+  + + +L       G  
Sbjct: 132 GLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTT-FVYNAVLRVLVASGGVV 190

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             ALAL+N M       +   YNVL++G C  G    A   F +ML+RG  P+V T+  L
Sbjct: 191 PLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTIL 250

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-S 396
           L+ +C  G+L EA +    +   G  PD+++Y   + GLC  G + +A E L ++    +
Sbjct: 251 LSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGT 310

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFS-IRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
            V     ++ +IDG    G     F    +++     S ++  +  +I      G I DA
Sbjct: 311 FVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDA 370

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           F+   EM      PD F YN L+ A C+ G +  A  L  EM +  +  D  T+T +I G
Sbjct: 371 FAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHG 430

Query: 516 HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            C +  + EA +VF  +  +G     + + +L     R    ++AR +  K  + N
Sbjct: 431 LCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGN 486



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 10/285 (3%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           +  +IR     G+I  A     +M +K   PD   +N L+  LC  GDL+ A  ++ EM+
Sbjct: 354 YTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMA 413

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +     +  T+   I G C+   +D+A+ +F  M   G  P  +T+N+L+  L +   L 
Sbjct: 414 QNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLE 473

Query: 241 DAVKFLGEVLADDD----------GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           +A     ++   ++               D  +   L+DS  ++G   +A  L   +   
Sbjct: 474 EARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDS 533

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
            +  D+V YN L+NG C   ++  A   F ++  +GF  D ITY TL++ L +  + ++A
Sbjct: 534 GVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDA 593

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
              +  +   G  P    Y +I++ LC    + +A  F    L K
Sbjct: 594 MTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWFDHLLK 638



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 4/228 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  +C  G++  A  L R ++  G VPDV+T+N L+N LCK+ +L+ A  + RE+    
Sbjct: 510 LVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKG 569

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            S +  TY   I    R +  + A+ LF  + + G  P+   +N ++ +LC+   L  A+
Sbjct: 570 FSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAI 629

Query: 244 KF-LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            F    +L   +  A  +VI S       F+ G   +A+     + Q+    +   Y + 
Sbjct: 630 NFWFDHLLKKYNLSAQDEVIASA---RKKFEEGSLDEAVRELIKIDQEYGSVNSCPYTIW 686

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
           + G      I  A   F  + + G          L   LC +  LD A
Sbjct: 687 LIGLIQARRIDDALKIFHILEESGIDITPACCAHLSKYLCWEKNLDSA 734



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 25/238 (10%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   H  +I  LC    +  A+ +   M++ G  P V+T+N L++ L +   LE+A  + 
Sbjct: 420 DTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLF 479

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            +M E+  +P+                    L L  T+  N ++ +      LV ++C+ 
Sbjct: 480 YKM-EVGNNPS--------------------LFLRLTLGANQVKDSESLQK-LVDSMCQS 517

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G +  A K L  ++   D     DV+T   L++   K  +   AL L+ ++  K    D 
Sbjct: 518 GQVLKAYKLLRGIM---DSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDE 574

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           + Y  LI+        + A   F  +L  G  P +  YN+++  LC+  KL +A +F+
Sbjct: 575 ITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFW 632


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 184/395 (46%), Gaps = 4/395 (1%)

Query: 132 GKIGTA-LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           GKI  A  WL   MIQ+G +PD  T   ++  LC+ G + +A    R+M ++   PN   
Sbjct: 231 GKIQEADRWLT-GMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLIN 289

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           + + I G C+   + +A  +   M  NG +PN  TH  L+  LCK+G    A +   +++
Sbjct: 290 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 349

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             D  K   +V T T ++  Y K     +A  L++ M ++ +  ++  Y  LING C  G
Sbjct: 350 RSDTYKP--NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAG 407

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
               A+     M   GF+P++ TYN  ++ LCK+ +  EA          G+  D ++Y 
Sbjct: 408 SFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYT 467

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +IQ  C   DI +A  F   M +     +  + N++I  + R   +  +  +  L++S 
Sbjct: 468 ILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL 527

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+     T+ ++I    + G I  A      M   G  PD FTY  LI   C    +  A
Sbjct: 528 GLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEA 587

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            +LY+ M+ RG++P  +T   L   +C R +   A
Sbjct: 588 CKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANA 622



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/422 (23%), Positives = 200/422 (47%), Gaps = 4/422 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R+    G++  A+ +   M  +G  P  +T N ++    ++G +E A++V  EMS   
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+ ++Y   + G  R  ++ +A    + M   G  P+  T  +++ ALC+ GL+  A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            +  +++   D     ++I  T L+D   K G   QA  +  +M +   + ++  +  LI
Sbjct: 273 WYFRKMI---DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 329

Query: 304 NGFCLNGDISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +G C  G    AF  F ++++   + P+V TY +++   CK+ KL+ A   +  + + G+
Sbjct: 330 DGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 389

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+  +Y T+I G C  G   +A E +  M ++  +P  + +N  ID   +      A+ 
Sbjct: 390 FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYE 449

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + +   S G+ ++  T+  LI  + +   I  A +    M   G   D+   N+LI A C
Sbjct: 450 LLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFC 509

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               +  + +L+  ++  G+ P   TYT +I  +C  G++  A + F  ++  G   D  
Sbjct: 510 RQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSF 569

Query: 543 PF 544
            +
Sbjct: 570 TY 571



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 160/346 (46%), Gaps = 39/346 (11%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE-- 181
           ++  LC  G +  A+W  RKMI  G  P+++    L++ LCK G +++A  ++ EM    
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317

Query: 182 MRPS----------------------------------PNCATYNAFITGYCRVNELDKA 207
            +P+                                  PN  TY + I GYC+ ++L++A
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 377

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             LFS M   G+ PN  T+  L++  CK G  G A + +   L  D+G    ++ T    
Sbjct: 378 EMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMN--LMGDEG-FMPNIYTYNAA 434

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +DS  K     +A  L N  F   ++ D V Y +LI   C   DI+ A A+FC+M K GF
Sbjct: 435 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGF 494

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             D+   N L+   C+Q K+ E+   + ++   G+ P + +Y ++I   C  GDI  A +
Sbjct: 495 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 554

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVS 433
           +  +M     VP+   +  +I G  +   +  A  + + M+  G+S
Sbjct: 555 YFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 600



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 176/411 (42%), Gaps = 62/411 (15%)

Query: 158 YLV--NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           YLV  + L   G+L+KA  V+R M               +  +  +  L++A+ +   M 
Sbjct: 130 YLVTADSLLANGNLQKAHEVMRCM---------------LRNFSEIGRLNEAVGMVMDMQ 174

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           N G+ P+ +T N ++    + GL+                               Y +N 
Sbjct: 175 NQGLTPSSITMNCVLEIAVELGLI------------------------------EYAEN- 203

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
                  ++++M  + +  D  +Y +++ G   +G I  A  +   M++RGF+PD  T  
Sbjct: 204 -------VFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCT 256

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            +L  LC+ G ++ A  ++  +   G  P+ I++ ++I GLC  G I +A E L  M+  
Sbjct: 257 LILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN 316

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
              P  +    +IDG  + G    AF +   L+ S     NV T+ ++I    +   +  
Sbjct: 317 GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 376

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L   M   G+FP+V TY  LI   C  G    A +L + M   G  P+I TY   I 
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
             C +    EA E+  K  + GL  D + + IL      ++E  K  DI+Q
Sbjct: 437 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL------IQEQCKQNDINQ 481



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 135/285 (47%), Gaps = 4/285 (1%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           T + +   + ++I   C   K+  A  L  +M ++G  P+V T+  L+N  CK G   +A
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             ++  M +    PN  TYNA I   C+ +   +A  L +   + G+  + VT+ IL+  
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
            CK+  +  A+ F   +   +     +D+  + IL+ ++ +     ++  L+  +    +
Sbjct: 473 QCKQNDINQALAFFCRM---NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
                 Y  +I+ +C  GDI  A  YF  M + G +PD  TY +L++ LCK+  +DEA  
Sbjct: 530 IPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK 589

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
            Y  +   G++P +++  T+    C   D   A   LL  L+K +
Sbjct: 590 LYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM-ILLEPLDKKL 633



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 6/235 (2%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           C LE D   +  +I++ C    I  AL    +M + G   D+  +N L+   C+   +++
Sbjct: 457 CGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKE 516

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           ++ + + +  +   P   TY + I+ YC+  ++D AL  F  M  +G  P+  T+  L+ 
Sbjct: 517 SERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 576

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            LCKK ++ +A K    ++  D G +  +V T   L   Y K  D   A+ L   + +K 
Sbjct: 577 GLCKKSMVDEACKLYEAMI--DRGLSPPEV-TRVTLAYEYCKRNDSANAMILLEPLDKK- 632

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
               I     L+   C    +  A  +F ++L++    D +T         + GK
Sbjct: 633 --LWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGK 685


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 210/474 (44%), Gaps = 42/474 (8%)

Query: 94   LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
            LKE +D +  MR+ G V  T   +  R + V  ++ L    G       +M  +G  PD 
Sbjct: 777  LKEAVDMILDMRNQGLVLTTRVMN--RIILVAAEMRLVEYAGNVF---DEMSARGVYPDS 831

Query: 154  LTHNYLVNELCKIGDLEKADHVIREMSE-------------------------------- 181
             T+ Y++   C+ G++ +AD  I EM E                                
Sbjct: 832  CTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHK 891

Query: 182  ---MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
               M  SPN   Y++ I+G C+   + +A  L   M  NG +PN  TH  L+H LCKKG 
Sbjct: 892  VTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGW 951

Query: 239  LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
               A +   +++  D+ K   +V T T ++  Y K     +A  L+  M ++ +  +   
Sbjct: 952  TERAFRLFLKLIRSDNYKP--NVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNT 1009

Query: 299  YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
            Y  LI+G C  G+ S A+     M   GF P+  TYN++++ LCK+G+ +EA        
Sbjct: 1010 YTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGF 1069

Query: 359  KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
            +  +  D ++Y  +I   C   D+ +A  FL  M +    P+ H++  +I  + R   + 
Sbjct: 1070 QNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMK 1129

Query: 419  NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            ++  + D ++  G++    T+ ++I    R   +  A    ++M   G  PD  +Y  LI
Sbjct: 1130 DSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALI 1189

Query: 479  GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
               C    +  A QLYD M+ +G++P  +T   L   +C   +   A  +  ++
Sbjct: 1190 SGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL 1243



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 204/455 (44%), Gaps = 4/455 (0%)

Query: 111  RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
            +C LE  +     ++      GK+  A+ +   M  +G V      N ++    ++  +E
Sbjct: 754  KCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVE 813

Query: 171  KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
             A +V  EMS     P+  TY   I GYCR   + +A      M   G   +  T  +++
Sbjct: 814  YAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLII 873

Query: 231  HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
             A C+K L+  AV F  +V        + ++I  + ++    K G   QA  L  +M + 
Sbjct: 874  TAFCEKSLVNRAVWFFHKV---TKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKN 930

Query: 291  NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLDE 349
              + ++  +  LI+G C  G    AF  F ++++   + P+V TY  +++  CK+ KL  
Sbjct: 931  GWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSR 990

Query: 350  ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
            A   +  + + G+ P+  +Y T+I G C  G+  KA E +  M  +   P    +N I+D
Sbjct: 991  AEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVD 1050

Query: 410  GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
            G  + G    AF + +      + ++  T+  LI  + +   +  A     +M   G  P
Sbjct: 1051 GLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQP 1110

Query: 470  DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
            D+  Y  LI A C    +  + +L+DE+++ G+ P   TYT +I G+C    +  A + F
Sbjct: 1111 DIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFF 1170

Query: 530  AKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
             K+   G A D I +  L     +    D+AR ++
Sbjct: 1171 QKMSDHGCAPDSISYGALISGLCKESRLDEARQLY 1205



 Score = 40.0 bits (92), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 2/125 (1%)

Query: 121  HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
            + ++I   C   K+  A+   +KM   G  PD +++  L++ LCK   L++A  +   M 
Sbjct: 1150 YTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMI 1209

Query: 181  EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
            +   SP   T       YC+  +   A+ +   +  N     R  H ++    C+K +  
Sbjct: 1210 DKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL--NKKLWIRTVHTLIRKLCCEKKVAL 1267

Query: 241  DAVKF 245
             A+ F
Sbjct: 1268 AALFF 1272


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 182/377 (48%), Gaps = 3/377 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           K+  A+ L  KM + G  P ++T + L+   C+ G +++A  +  EM      PN  TY 
Sbjct: 413 KVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYT 472

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             + GY +    DKA  L + M  NG+     T+NIL++ LC    + +  + L   +++
Sbjct: 473 TLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSE 532

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                T   +T   +++ + K G    ALA++  M +K I  +IV Y   I+G+C     
Sbjct: 533 GFVPTT---MTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCC 589

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A      M   G  PD+  YN  +N  CKQG +  A HF  +L K G+ P+   Y + 
Sbjct: 590 DLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSF 649

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           + G      + +A +F  SM+++ +  +  I+  +IDG+ + G+++ A  +   ML+   
Sbjct: 650 VTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHN 709

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             +  TF AL     R G I  A  L  +M    + P+  TYN+LI A    G +  A Q
Sbjct: 710 IPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQ 769

Query: 493 LYDEMLRRGITPDIITY 509
           L+D+ML  G+ PD  TY
Sbjct: 770 LHDKMLSSGVVPDDTTY 786



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/480 (25%), Positives = 211/480 (43%), Gaps = 39/480 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++  CL G+IG AL L  + ++ G  P  +T+  L+      G  ++   + R+M E  
Sbjct: 300 LMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQG 359

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFS------------------------------- 212
             P+   +N  I G  R  + + A+ LF                                
Sbjct: 360 LLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVN 419

Query: 213 ---TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTILM 268
               M   G++P+ VT + L+   C+KG + +A+K   E+     GK    + +T T LM
Sbjct: 420 LWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEM----PGKGFPPNEVTYTTLM 475

Query: 269 DSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
             Y K     +A AL N+M Q  +      YN+LING C+   +        + +  GF+
Sbjct: 476 KGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFV 535

Query: 329 PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREF 388
           P  +TYN+++N   K G +  A   Y  + + G+ P+ ++Y + I G C       A + 
Sbjct: 536 PTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKL 595

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETR 448
           L+ M    + P+   +N  I+ + + G++S+A     L+L  G++ NV  +N+ +     
Sbjct: 596 LIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKN 655

Query: 449 GGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
              + +A      M+   I  D   Y  LI     +G++  AL+LY EML     PD  T
Sbjct: 656 LKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKT 715

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +T L  G C  G++  A+ +   +  L +  + + + +L   + R  +  +A  +H K L
Sbjct: 716 FTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKML 775



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 197/426 (46%), Gaps = 8/426 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI+ L    +   A+ L   ++  G VPDV T+  L++ L K   + +A ++  +M E  
Sbjct: 370 VIKGLLRNKQWEDAIALFDLVVDTG-VPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAG 428

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  T ++ + GYC    +D+AL L+S M   G  PN VT+  L+    KK     A 
Sbjct: 429 VKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAY 488

Query: 244 KFLGEVLAD--DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
             L E+  +    G+ T +++ + + M       D+     +      +      + YN 
Sbjct: 489 ALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDE-----MLKRFVSEGFVPTTMTYNS 543

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +INGF   G + SA A + QM ++G  P+++TY + ++  C+    D A      +   G
Sbjct: 544 IINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNG 603

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD  +Y   I   C  G++  A  FL+ +L+  + P   ++N  + GY     ++ A 
Sbjct: 604 IHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEAS 663

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
                M+   ++++   +  LI   ++ G++  A  L  EML +   PD  T+  L    
Sbjct: 664 KFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGL 723

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C  G I  A +L D+M R  + P+ +TY  LI  H   G ++EA ++  K+ + G+  D 
Sbjct: 724 CRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDD 783

Query: 542 IPFRIL 547
             + I 
Sbjct: 784 TTYNIF 789



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 168/358 (46%), Gaps = 10/358 (2%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  AL L  +M  KG  P+ +T+  L+    K    +KA  ++ EM +   S   
Sbjct: 444 CEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGE 503

Query: 189 ATYNAFITGYC---RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
            TYN  I G C   RV E+D+ L  F    + G  P  +T+N +++   K G++G A+  
Sbjct: 504 YTYNILINGLCMVDRVCEVDEMLKRF---VSEGFVPTTMTYNSIINGFVKAGMMGSALAM 560

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             ++    +   T +++T T  +D Y +      A+ L   M    I  DI AYN  IN 
Sbjct: 561 YRQMC---EKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINM 617

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           FC  G++S A  +   +LK G  P+V  YN+ +        + EAS FY  + K  +A D
Sbjct: 618 FCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAAD 677

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
              Y T+I G    G++  A E    ML    +P+   +  +  G  R GD+  A  + D
Sbjct: 678 TEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLD 737

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            M    V  N  T+N LI A  R G + +AF L  +ML  G+ PD  TYN+    +CN
Sbjct: 738 DMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTYNIF-PLTCN 794



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 123/519 (23%), Positives = 222/519 (42%), Gaps = 67/519 (12%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D + +  V+R   +G   G A+ L  +M   G  PD   +   +  LCK+ D ++A  V+
Sbjct: 187 DAKMYDVVMRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVL 246

Query: 177 REMSEMRPSPNCATYNAFI------------------------------------TGYCR 200
            +M E    P   TYN+ +                                     GYC 
Sbjct: 247 GKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCL 306

Query: 201 VNELDKALHLFSTMANNGIRPNRVTHNILV------------HALCK----KGLLGDAVK 244
             E+ KAL LF     +G+ P  VT+ +L+            + LC+    +GLL    +
Sbjct: 307 HGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYE 366

Query: 245 F---LGEVLAD---DDGKATSDVITSTILMDSYF---------KNGDKFQALALWNDMFQ 289
           F   +  +L +   +D  A  D++  T + D +          K+    +A+ LW+ M +
Sbjct: 367 FNLVIKGLLRNKQWEDAIALFDLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKE 426

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDE 349
             ++  IV  + L+ G+C  G +  A   + +M  +GF P+ +TY TL+    K+   D+
Sbjct: 427 AGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDK 486

Query: 350 ASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
           A      + + GV+  + +Y  +I GLC+   + +  E L   + +  VP    +N II+
Sbjct: 487 AYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIIN 546

Query: 410 GYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFP 469
           G+ + G + +A ++   M   G++ N+ T+ + I    R      A  L   M  +GI P
Sbjct: 547 GFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHP 606

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D+  YN  I   C  G++  AL     +L+ G+TP++  Y   + G+     M EA + +
Sbjct: 607 DIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFY 666

Query: 530 AKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
             +    +A D   +  L   + ++     A +++ + L
Sbjct: 667 YSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEML 705



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 7/246 (2%)

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
           + +M+ RG +PD  +   LL    +     +A   +  +   G   D   Y  +++   +
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVV 200

Query: 379 ---HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
              HGD V+  +    M    V P+  ++ + I G  +  D   A  +   M   G+   
Sbjct: 201 GRMHGDAVRLFD---EMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPR 257

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLL-DGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
            FT+N+++    + G + +A  LK +MLL  G   DVF    L+   C  G I  AL L+
Sbjct: 258 DFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLF 317

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           DE +R G+TP  +TYT LIKG  A G   E  ++  ++   GL      F ++ K   R 
Sbjct: 318 DEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRN 377

Query: 555 KESDKA 560
           K+ + A
Sbjct: 378 KQWEDA 383



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 110/256 (42%), Gaps = 3/256 (1%)

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           ++ M  + +  D  +   L+         + A   F +M  +G+  D   Y+ ++   C 
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRA-CV 199

Query: 344 QGKL-DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
            G++  +A   +  ++  GV PD+  Y   I GLC   D  +A + L  M E  + P   
Sbjct: 200 VGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDF 259

Query: 403 IWNVIIDGYGRCGDLSNAFSIRD-LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
            +N ++D   + G +  A  ++D ++L+ G   +VF    L+      G I  A  L  E
Sbjct: 260 TYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDE 319

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGN 521
            + DG+ P   TY +LI      G      +L  +M+ +G+ P    +  +IKG      
Sbjct: 320 AVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQ 379

Query: 522 MKEAEEVFAKIQTLGL 537
            ++A  +F  +   G+
Sbjct: 380 WEDAIALFDLVVDTGV 395



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 91/233 (39%), Gaps = 40/233 (17%)

Query: 110 VRCT-LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           +RC  +  D   + A I   C  G +  AL     +++ G  P+V  +N  V     +  
Sbjct: 599 MRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKM 658

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
           + +A      M + R + +   Y   I G+ +V  +  AL L+S M  N   P+  T   
Sbjct: 659 MAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTA 718

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L H LC+ G              D DG                        A  L +DM 
Sbjct: 719 LTHGLCRSG--------------DIDG------------------------AKRLLDDMT 740

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL-LNC 340
           + ++  + V YN+LIN    +G +  AF    +ML  G +PD  TYN   L C
Sbjct: 741 RLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTYNIFPLTC 793


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 178/366 (48%), Gaps = 3/366 (0%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P    ++A  +     +  ++AL  FS M    + P   + N L+H   + G      +F
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             +++      +   V T  I++D   K GD   A  L+ +M  + +  D V YN +I+G
Sbjct: 121 FKDMIG---AGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDG 177

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
           +   G +     +F +M      PDVITYNTL+NC CK GKL +   F+  + ++G+ P+
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPN 237

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            +SY T++   C    + +A +F + M    +VP  H +  ++D Y + G+LS+AF + D
Sbjct: 238 VVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLAD 297

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   GV  NV T+ ALI        I +A  L  +M+  G+ P++ +Y  LI       
Sbjct: 298 EMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAK 357

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
           ++  AL+L DEM  RGI PD++ Y   I   C    ++ A+ V  ++Q  G+  +   + 
Sbjct: 358 NMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYT 417

Query: 546 ILKKRY 551
            L   Y
Sbjct: 418 TLMDAY 423



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 196/417 (47%), Gaps = 16/417 (3%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           +C  G I  A  L  +M  +G +PD +T+N +++   K+G L+   +   EM  M   P+
Sbjct: 143 MCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPD 202

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF-- 245
             TYN  I  +C+  +L K L  F  M  +G++PN V+++ LV A CK+ ++  A+KF  
Sbjct: 203 VITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYV 262

Query: 246 ----LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
               LG V  +          T T L+D+Y K G+   A  L ++M Q  ++ ++V Y  
Sbjct: 263 DMRRLGLVPNEH---------TYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTA 313

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           LI+G C    I  A   F +M+  G +P++ +Y  L++   K   +D A      +   G
Sbjct: 314 LIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRG 373

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + PD + Y T I  LC    I  A+  +  M EK +     I+  ++D Y +  + S   
Sbjct: 374 IKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGL 433

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD-GIFPDVFTYNLLIGA 480
            + + ML   +     TF  LI    +   +  A      +  D G+  +   Y  +I  
Sbjct: 434 HLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDG 493

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            C    +  A  L+++M ++G+ PD   YT LI G   +GN+ +A  +  K+  +G+
Sbjct: 494 LCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGV 550



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 214/472 (45%), Gaps = 19/472 (4%)

Query: 85  AVFNALDLIL------KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTAL 138
            VF+AL  +L      +E L     M+     RC +    R    ++      GK     
Sbjct: 64  GVFDALFSVLIEEDMFEEALQCFSKMK-----RCRVFPKTRSCNGLLHKFARLGKTDGMK 118

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
              + MI  G+ P V T+N +++ +CK GD+E A  +  EM      P+  TYN+ I GY
Sbjct: 119 RFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGY 178

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
            +V  LD  ++ F  M +    P+ +T+N L++  CK G L   ++F  E+         
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREM---KQSGLK 235

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            +V++ + L+D++ K     QAL  + DM +  +  +   Y  L++ +C  G++S AF  
Sbjct: 236 PNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRL 295

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             +M + G   +V+TY  L++ LC   ++ EA   +G +   GV P+  SY  +I G   
Sbjct: 296 ADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVK 355

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG--DLSNAFSIRDLMLSFGVSSNV 436
             ++ +A E L  M  + + P+  ++   I  +  CG   +  A  + + M   G+ +N 
Sbjct: 356 AKNMDRALELLDEMKGRGIKPDLLLYGTFI--WSLCGLEKIEAAKVVMNEMQEKGIKANT 413

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           F +  L+ A  +  +  +   L +EML   I     T+ +LI   C    +  A+  +  
Sbjct: 414 FIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGR 473

Query: 497 MLRR-GITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +    G+  +   YT +I G C    ++ A  +F ++   GL  D   +  L
Sbjct: 474 ISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSL 525



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 149/309 (48%), Gaps = 5/309 (1%)

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
           G    D + S ++ +  F+     +AL  ++ M +  +     + N L++ F   G    
Sbjct: 62  GFGVFDALFSVLIEEDMFE-----EALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDG 116

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
              +F  M+  G  P V TYN +++C+CK+G ++ AS  +  +   G+ PD ++Y ++I 
Sbjct: 117 MKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMID 176

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G    G +     F   M   S  P+   +N +I+ + + G L         M   G+  
Sbjct: 177 GYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKP 236

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           NV +++ L+ A  +   +  A     +M   G+ P+  TY  L+ A C +G++  A +L 
Sbjct: 237 NVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLA 296

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
           DEM + G+  +++TYT LI G C    +KEAEE+F K+ T G+  +   +  L   + + 
Sbjct: 297 DEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKA 356

Query: 555 KESDKARDI 563
           K  D+A ++
Sbjct: 357 KNMDRALEL 365



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 154/360 (42%), Gaps = 39/360 (10%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           + E D   +  +I   C  GK+   L   R+M Q G  P+V++++ LV+  CK   +++A
Sbjct: 198 SCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQA 257

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
                +M  +   PN  TY + +  YC++  L  A  L   M+  G+  N VT+  L+  
Sbjct: 258 LKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDG 317

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LC    + +A +  G+++         ++ + T L+  + K  +  +AL L ++M  + I
Sbjct: 318 LCDVERIKEAEELFGKMVT---AGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGI 374

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNC------------ 340
           + D++ Y   I   C    I +A     +M ++G   +   Y TL++             
Sbjct: 375 KPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLH 434

Query: 341 -----------------------LCKQGKLDEASHFYGVLSKT-GVAPDQISYKTIIQGL 376
                                  LCK   + +A  ++G +S   G+  +   Y  +I GL
Sbjct: 435 LLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGL 494

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C    +  A      M +K +VP+   +  +IDG  + G++  A ++RD M   GV S  
Sbjct: 495 CKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGA 554



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 150/289 (51%), Gaps = 6/289 (2%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  L  +   + +++   C  G +  A  L  +M Q G   +V+T+  L++ LC +  ++
Sbjct: 266 RLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIK 325

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           +A+ +  +M      PN A+Y A I G+ +   +D+AL L   M   GI+P+ + +   +
Sbjct: 326 EAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFI 385

Query: 231 HALCKKGLLG-DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
            +LC  GL   +A K +   + +   KA + + T+  LMD+YFK+ +  + L L  +M +
Sbjct: 386 WSLC--GLEKIEAAKVVMNEMQEKGIKANTFIYTT--LMDAYFKSENPSEGLHLLEEMLE 441

Query: 290 KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQGKLD 348
            +I+   V + VLI+G C N  +S A  YF ++    G   +   Y  +++ LCK+ +++
Sbjct: 442 LDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVE 501

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
            A+  +  +++ G+ PD+ +Y ++I G    G++V+A      M E  V
Sbjct: 502 AATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGV 550


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 187/417 (44%), Gaps = 30/417 (7%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I   C  GK+G AL + R M  +G  P+  T++ L+  L +   L KA  +I +M 
Sbjct: 372 YTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ 431

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   +P   TY   I G C+ +E D A  LF  M  NG+ P+   +N+L HALCK G   
Sbjct: 432 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAE 491

Query: 241 DAVKFL---GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
           +A  FL   G VL           +T T L+D + K G+   A  L   M  +  + D  
Sbjct: 492 EAYSFLVRKGVVLTK---------VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSY 542

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL 357
            Y+VL+   C    ++ A +   QM   G   +++ Y  +++ + K+GK D A   +  +
Sbjct: 543 TYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEM 602

Query: 358 SKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDL 417
             +G  P   +Y   I   C  G I +A   +  M    V P+   +NV I+G G  G +
Sbjct: 603 ISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYM 662

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA-----------------FSLKK 460
             AFS    M+      N +T+  ++L      S+ DA                 + L +
Sbjct: 663 DRAFSTLKRMIDASCEPNYWTY-WILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLE 721

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
            M+  G+ P   TY+ +I   C    +  A  L+D M  + I+P+   YT LIK  C
Sbjct: 722 RMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCC 778



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 217/438 (49%), Gaps = 7/438 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  G++  AL ++  M + G  PD  T+N L+  LC     ++A+ ++ +    
Sbjct: 235 AMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCG-EKPDEAEELLNDAIVR 293

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P   T+   I GYC+   +D AL + ++M ++  + +   + +L++ L KK    +A
Sbjct: 294 GFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEA 353

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + + E+ A+  G A + VI ++I+ D Y K G    AL ++  M  +  + +   Y+ L
Sbjct: 354 KETVSEMFAN--GLAPNVVIYTSII-DGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSL 410

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I G   +  +  A A   +M + G  P VITY TL+   CK+ + D A   + ++ + G+
Sbjct: 411 IYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 470

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD+ +Y  +   LC  G   +A  FL+    K VV     +  ++DG+ + G+   A  
Sbjct: 471 TPDEQAYNVLTHALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGNTDFAAV 527

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M++ G  ++ +T++ L+ A  +   + +A S+  +M L G+  ++  Y ++I    
Sbjct: 528 LIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMI 587

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G    A  +++EM+  G  P   TYT  I  +C  G ++EAE +  +++  G+A D +
Sbjct: 588 KEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVV 647

Query: 543 PFRILKKRYRRMKESDKA 560
            + +       M   D+A
Sbjct: 648 TYNVFINGCGHMGYMDRA 665



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 174/400 (43%), Gaps = 7/400 (1%)

Query: 167 GDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
           GDL KA  ++  M  M    N  +Y   I G C    + +AL L   M  +G   N  T+
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
            +L+  LCK+G +  A + L E+           V T   ++D Y K+G    AL +   
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRG---VVPSVWTYNAMIDGYCKSGRMKDALGIKAL 255

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M +     D   YN+LI G C       A       + RGF P VIT+  ++N  CK  +
Sbjct: 256 MERNGCNPDDWTYNILIYGLC-GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAER 314

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           +D+A      +  +    D  +Y  +I  L       +A+E +  M    + P   I+  
Sbjct: 315 IDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTS 374

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           IIDGY + G +  A  +  LM   G   N +T+++LI    +   +  A +L  +M  DG
Sbjct: 375 IIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDG 434

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           I P V TY  LI   C       A +L++ M + G+TPD   Y  L    C  G    AE
Sbjct: 435 ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSG---RAE 491

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           E ++ +   G+ +  + +  L   + +   +D A  + +K
Sbjct: 492 EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEK 531



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 197/449 (43%), Gaps = 10/449 (2%)

Query: 117 DYRRHVAVIRDLC-LGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
           D R  V  I+ +  +GG +  A WL   M   G   +  ++  L+  LC+   + +A  +
Sbjct: 123 DMREAVDAIQAIRRVGGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVL 182

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           +  M +   S N  TY   I G C+   +  A  +   M   G+ P+  T+N ++   CK
Sbjct: 183 LVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCK 242

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF-QALALWNDMFQKNIQT 294
            G + DA+    + L + +G    D  T  IL+  Y   G+K  +A  L ND   +    
Sbjct: 243 SGRMKDALGI--KALMERNG-CNPDDWTYNILI--YGLCGEKPDEAEELLNDAIVRGFTP 297

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
            ++ +  +ING+C    I  A      ML      D+  Y  L+N L K+ +  EA    
Sbjct: 298 TVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETV 357

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +   G+AP+ + Y +II G C  G +  A E    M  +   P    ++ +I G  + 
Sbjct: 358 SEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQD 417

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
             L  A ++   M   G++  V T+  LI  + +     +AF L + M  +G+ PD   Y
Sbjct: 418 QKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAY 477

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           N+L  A C  G    A + Y  ++R+G+    +TYT L+ G    GN   A  +  K+  
Sbjct: 478 NVLTHALCKSGR---AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVN 534

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDI 563
            G   D   + +L +   + K+ ++A  I
Sbjct: 535 EGCKADSYTYSVLLQALCKQKKLNEALSI 563



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/362 (22%), Positives = 149/362 (41%), Gaps = 30/362 (8%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   +  +++ LC   K+  AL +  +M   G   +++ +  +++E+ K G  + A  
Sbjct: 538 KADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKS 597

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
           +  EM      P+  TY  FI+ YC++ ++++A HL   M  +G+ P+ VT+N+ ++   
Sbjct: 598 MFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCG 657

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK----NGDKFQALALWN----- 285
             G +  A   L  ++   D     +  T  IL+  + K    +        +WN     
Sbjct: 658 HMGYMDRAFSTLKRMI---DASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELD 714

Query: 286 -------DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
                   M +  +    V Y+ +I GFC    +  A   F  M  +   P+   Y  L+
Sbjct: 715 TVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLI 774

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
            C C      +A  F   + + G  P   SY  +I GLC  GD  KA+     +L     
Sbjct: 775 KCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDY 834

Query: 399 PEPHI-WNVIIDGYGR------CGDLSNAFSIRDLMLSFG----VSSNVFTFNALILAET 447
               + W ++ DG  +      C  L +A   R   +       V+ N+   +  +++E 
Sbjct: 835 NHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMVTDNIHEASGSVVSEL 894

Query: 448 RG 449
           RG
Sbjct: 895 RG 896



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 111/264 (42%), Gaps = 4/264 (1%)

Query: 311 DISSAFAYFCQMLKR-GFLPDVITYNTLLNCLCKQ-GKLDEASHFYGVLSKTGVAPDQIS 368
           D ++A A+F  + +R GF     ++  LL  L ++    +       ++S +  A D   
Sbjct: 67  DPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMVSCSDTAEDMRE 126

Query: 369 YKTIIQGLC-IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
               IQ +  + GD+ KA   L+ M         + + ++I G      +  A  +  +M
Sbjct: 127 AVDAIQAIRRVGGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMM 186

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +  G S N+ T+  LI    + G I  A  + +EM L G+ P V+TYN +I   C  G +
Sbjct: 187 VQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRM 246

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             AL +   M R G  PD  TY  LI G C      EAEE+       G     I F  +
Sbjct: 247 KDALGIKALMERNGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNI 305

Query: 548 KKRYRRMKESDKARDIHQKWLLRN 571
              Y + +  D A  +    L  N
Sbjct: 306 INGYCKAERIDDALRVKTSMLSSN 329


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 210/474 (44%), Gaps = 42/474 (8%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           LKE +D +  MR+ G V  T   +  R + V  ++ L    G       +M  +G  PD 
Sbjct: 190 LKEAVDMILDMRNQGLVLTTRVMN--RIILVAAEMRLVEYAGNVF---DEMSARGVYPDS 244

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSE-------------------------------- 181
            T+ Y++   C+ G++ +AD  I EM E                                
Sbjct: 245 CTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHK 304

Query: 182 ---MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
              M  SPN   Y++ I+G C+   + +A  L   M  NG +PN  TH  L+H LCKKG 
Sbjct: 305 VTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGW 364

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
              A +   +++  D+ K   +V T T ++  Y K     +A  L+  M ++ +  +   
Sbjct: 365 TERAFRLFLKLIRSDNYKP--NVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNT 422

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y  LI+G C  G+ S A+     M   GF P+  TYN++++ LCK+G+ +EA        
Sbjct: 423 YTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGF 482

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           +  +  D ++Y  +I   C   D+ +A  FL  M +    P+ H++  +I  + R   + 
Sbjct: 483 QNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMK 542

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
           ++  + D ++  G++    T+ ++I    R   +  A    ++M   G  PD  +Y  LI
Sbjct: 543 DSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALI 602

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
              C    +  A QLYD M+ +G++P  +T   L   +C   +   A  +  ++
Sbjct: 603 SGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL 656



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 2/125 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I   C   K+  A+   +KM   G  PD +++  L++ LCK   L++A  +   M 
Sbjct: 563 YTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMI 622

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   SP   T       YC+  +   A+ +   +  N     R  H ++    C+K +  
Sbjct: 623 DKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL--NKKLWIRTVHTLIRKLCCEKKVAL 680

Query: 241 DAVKF 245
            A+ F
Sbjct: 681 AALFF 685


>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
 gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
 gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 536

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 182/389 (46%), Gaps = 41/389 (10%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           TYN      C+    D A  +F  M ++G+ PN      LV +  +KG L  A   L   
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--- 161

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           L   + +    V+ S  L+++  K      A+ L+++  +     D   +N+LI G C  
Sbjct: 162 LQSFEVEGCCMVVNS--LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGV 219

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH-FYGVLSKTGVAPDQIS 368
           G    A      M   G  PD++TYNTL+   CK  +L++AS  F  V S +  +PD ++
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y ++I G C  G + +A   L  ML   + P    +NV++DGY + G++  A  IR  M+
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN----- 483
           SFG   +V TF +LI    R G +   F L +EM   G+FP+ FTY++LI A CN     
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399

Query: 484 ------------------------------LGHIHLALQLYDEMLRRGITPDIITYTELI 513
                                          G ++ A  + +EM ++   PD IT+T LI
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            GHC +G M EA  +F K+  +G + D I
Sbjct: 460 IGHCMKGRMFEAVSIFHKMVAIGCSPDKI 488



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 178/351 (50%), Gaps = 3/351 (0%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N L+N L K+  +E A  +  E    +   +  T+N  I G C V + +KAL L   M+ 
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G  P+ VT+N L+   CK   L  A +   +V        + DV+T T ++  Y K G 
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV--KSGSVCSPDVVTYTSMISGYCKAGK 292

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A +L +DM +  I    V +NVL++G+   G++ +A     +M+  G  PDV+T+ +
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L++  C+ G++ +    +  ++  G+ P+  +Y  +I  LC    ++KARE L  +  K 
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           ++P+P ++N +IDG+ + G ++ A  I + M       +  TF  LI+     G +F+A 
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           S+  +M+  G  PD  T + L+      G    A  L +++ R+G + +++
Sbjct: 473 SIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVV 522



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 153/321 (47%), Gaps = 5/321 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D +    +IR LC  GK   AL L   M   G  PD++T+N L+   CK  +L KA  + 
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264

Query: 177 REM-SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           +++ S    SP+  TY + I+GYC+  ++ +A  L   M   GI P  VT N+LV    K
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G +  A +  G++++        DV+T T L+D Y + G   Q   LW +M  + +  +
Sbjct: 325 AGEMLTAEEIRGKMISFG---CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN 381

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
              Y++LIN  C    +  A     Q+  +  +P    YN +++  CK GK++EA+    
Sbjct: 382 AFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + K    PD+I++  +I G C+ G + +A      M+     P+    + ++    + G
Sbjct: 442 EMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501

Query: 416 DLSNAFSIRDLMLSFGVSSNV 436
               A+ +  +    G S+NV
Sbjct: 502 MAKEAYHLNQIARK-GQSNNV 521



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 3/237 (1%)

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TYN L   LCK G  D A   +  +   GV+P+      ++      G +  A   LL  
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
            E  V     + N +++   +   + +A  + D  L F   ++  TFN LI      G  
Sbjct: 165 FE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI-TPDIITYTE 511
             A  L   M   G  PD+ TYN LI   C    ++ A +++ ++    + +PD++TYT 
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +I G+C  G M+EA  +   +  LG+   ++ F +L   Y +  E   A +I  K +
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 114/274 (41%), Gaps = 3/274 (1%)

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
           F+ NI+     YN+L    C  G    A   F  M   G  P+      L++   ++GKL
Sbjct: 95  FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
             A+    +L    V    +   +++  L     +  A +     L      +   +N++
Sbjct: 155 HFATAL--LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I G    G    A  +  +M  FG   ++ T+N LI    +   +  A  + K++    +
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272

Query: 468 F-PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             PDV TY  +I   C  G +  A  L D+MLR GI P  +T+  L+ G+   G M  AE
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           E+  K+ + G   D + F  L   Y R+ +  + 
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 208/437 (47%), Gaps = 6/437 (1%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  GK+  AL +R  M + G  P+VLT N +++ LCK   LE+A  +   M +   +PN
Sbjct: 414 LCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPN 473

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             T+++ I G  +   +D A  L+  M + G  P  + +  L+ +  K G   D  K   
Sbjct: 474 AVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYK 533

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E++       + D+      MD  FK G+  +  AL+ ++       D  +Y++LI+G  
Sbjct: 534 EMVHTG---CSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLV 590

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G  +  +  F  M ++G + D   YN +++  CK GK+++A      +   G  P  +
Sbjct: 591 KAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVV 650

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y ++I GL     + +A           +     +++ +IDG+G+ G +  A+ I + +
Sbjct: 651 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL 710

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +  G++ NV+T+N L+ A  +   I +A    + M      P+  TY++LI   C +   
Sbjct: 711 MQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKF 770

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + A   + EM + G+ P+ ITYT +I G    GN+ EA  +F++ +  G   D   +  +
Sbjct: 771 NKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAM 830

Query: 548 KKRYRRMKESDKARDIH 564
                 +  ++KA D +
Sbjct: 831 ---IEGLSSANKAMDAY 844



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 198/421 (47%), Gaps = 6/421 (1%)

Query: 129 CLGGK--IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           CLG K  +  AL +  +M ++  VP+V T+N L++ LC+ G L  A  +  +M      P
Sbjct: 379 CLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFP 437

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N  T N  I   C+  +L++A  +F  M +    PN VT + L+  L K G + DA    
Sbjct: 438 NVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLY 497

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            ++L   D       I  T L+ S+FK G K     ++ +M       D+   N  ++  
Sbjct: 498 EKML---DCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCV 554

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
              G+     A F ++   GF+PD  +Y+ L++ L K G  +E    +  + + G   D 
Sbjct: 555 FKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDT 614

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
            +Y  +I G C  G + KA + L  M  K   P    +  +IDG  +   L  A+ + + 
Sbjct: 615 HAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEE 674

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
             S G+  NV  +++LI    + G I +A+ + +E++  G+ P+V+T+N L+ A      
Sbjct: 675 AKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 734

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           I+ AL  +  M      P+ ITY+ LI G C      +A   + ++Q LGL  + I +  
Sbjct: 735 INEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTT 794

Query: 547 L 547
           +
Sbjct: 795 M 795



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 201/430 (46%), Gaps = 4/430 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK   A  L  +   KG++P V+ +N ++  L K   +E+A  +  EM      PN  T
Sbjct: 348 AGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR-DAVPNVPT 406

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I   CR  +L+ AL +   M   G+ PN +T NI++  LCK   L +A      + 
Sbjct: 407 YNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM- 465

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             DD   T + +T + L+D   K G    A +L+  M         + Y  LI  F   G
Sbjct: 466 --DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCG 523

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
                   + +M+  G  PD+   NT ++C+ K G+ ++    +  ++  G  PD  SY 
Sbjct: 524 RKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYS 583

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +I GL   G   +  E   +M E+  V + H +N +IDG+ + G ++ A+ + + M   
Sbjct: 584 ILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVK 643

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G    V T+ ++I    +   + +A+ L +E   +GI  +V  Y+ LI     +G I  A
Sbjct: 644 GHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEA 703

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
             + +E++++G+TP++ T+  L+        + EA   F  ++ L    + I + IL   
Sbjct: 704 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILING 763

Query: 551 YRRMKESDKA 560
             R+++ +KA
Sbjct: 764 LCRVRKFNKA 773



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 109/447 (24%), Positives = 197/447 (44%), Gaps = 9/447 (2%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           L+E  D ++TMR     +      +  +  +I  L    +    L L  +M + G   +V
Sbjct: 176 LREAFDIIQTMR-----KFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNV 230

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
                L+    + G ++ A  ++ EM       +   YN  I  + +  ++D +   F  
Sbjct: 231 HLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHE 290

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M ++G+ P+ VT+  ++  LCK   L +AV+   ++  + + K       +T++M  Y  
Sbjct: 291 MKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQL--EQNRKVPCAYAYNTMIM-GYGS 347

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
            G   +A  L      K     ++AYN ++        +  A   F +M KR  +P+V T
Sbjct: 348 AGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPT 406

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YN L++ LC++GKL+ A      + + G+ P+ ++   +I  LC    + +A      M 
Sbjct: 407 YNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMD 466

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIF 453
           +K   P    ++ +IDG G+CG + +A+S+ + ML  G       + +LI +  + G   
Sbjct: 467 DKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKE 526

Query: 454 DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELI 513
           D   + KEM+  G  PD+   N  +      G       L+ E+   G  PD  +Y+ LI
Sbjct: 527 DGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILI 586

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAID 540
            G    G   E  E+F  ++  G  +D
Sbjct: 587 HGLVKAGLANETYELFYAMKEQGCVLD 613



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 97/422 (22%), Positives = 183/422 (43%), Gaps = 4/422 (0%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           E +      +IR     G++  AL L  +M       D++ +N  ++   K G ++ +  
Sbjct: 227 EVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWK 286

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALC 234
              EM      P+  TY + I   C+ N LD+A+ LF  +  N   P    +N ++    
Sbjct: 287 FFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYG 346

Query: 235 KKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT 294
             G   +A   L    A     +   VI    ++    K     +AL ++ +M +++   
Sbjct: 347 SAGKFDEAYGLLERQKAKG---SIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVP 402

Query: 295 DIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFY 354
           ++  YN+LI+  C  G +++A      M + G  P+V+T N +++ LCK  KL+EA   +
Sbjct: 403 NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIF 462

Query: 355 GVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRC 414
             +      P+ +++ ++I GL   G +  A      ML+   VP   ++  +I  + +C
Sbjct: 463 EGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKC 522

Query: 415 GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY 474
           G   +   I   M+  G S ++   N  +    + G      +L +E+   G  PD  +Y
Sbjct: 523 GRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSY 582

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
           ++LI      G  +   +L+  M  +G   D   Y  +I G C  G + +A ++  +++ 
Sbjct: 583 SILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKV 642

Query: 535 LG 536
            G
Sbjct: 643 KG 644



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 184/406 (45%), Gaps = 10/406 (2%)

Query: 142 RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
            K  +K   P+   +N L+  + +  + +  + ++ EMS     P+       +    + 
Sbjct: 116 EKQTEKVHCPE--AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKS 173

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
            +L +A  +  TM     RP    + IL+ AL  +    D +  L   + +   +    +
Sbjct: 174 RKLREAFDIIQTMRKFKFRPAFSAYTILIGAL-SEVREPDPMLILFHQMQELGYEVNVHL 232

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
            T+  L+  + + G    AL+L ++M   ++  DIV YNV I+ F   G +  ++ +F +
Sbjct: 233 FTT--LIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHE 290

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M   G +PD +TY +++  LCK  +LDEA   +  L +    P   +Y T+I G    G 
Sbjct: 291 MKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGK 350

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
             +A   L     K  +P    +N I+   G+   +  A  I + M    V  NV T+N 
Sbjct: 351 FDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNI 409

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI    R G +  A  ++ +M   G+FP+V T N++I   C    +  A  +++ M  + 
Sbjct: 410 LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV 469

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            TP+ +T++ LI G    G + +A  ++ K+   G    H+P  I+
Sbjct: 470 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCG----HVPGAIV 511



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 3/260 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D R +  +I  L   G       L   M ++G V D   +N +++  CK G + KA  ++
Sbjct: 578 DARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLL 637

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P   TY + I G  +++ LD+A  LF    +NGI+ N V ++ L+    K 
Sbjct: 638 EEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKV 697

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A   + E++       T +V T   L+D+  K  +  +AL  +  M       + 
Sbjct: 698 GRIDEAYLIMEELMQKG---LTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQ 754

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + Y++LING C     + AF ++ +M K G  P+ ITY T+++ L K G + EAS  +  
Sbjct: 755 ITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSR 814

Query: 357 LSKTGVAPDQISYKTIIQGL 376
               G  PD  SY  +I+GL
Sbjct: 815 FKANGGIPDSASYNAMIEGL 834



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 169/379 (44%), Gaps = 4/379 (1%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            YN+ +    R  E D    +   M+ +G  P+      LV    K   L +A   +  +
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
                  A S     TIL+ +  +  +    L L++ M +   + ++  +  LI  F   
Sbjct: 187 RKFKFRPAFS---AYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFARE 243

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           G + +A +   +M       D++ YN  ++C  K GK+D +  F+  +   G+ PD ++Y
Sbjct: 244 GRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTY 303

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            ++I  LC    + +A E    + +   VP  + +N +I GYG  G    A+ + +   +
Sbjct: 304 TSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKA 363

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G   +V  +N ++    +   + +A  + +EM  D + P+V TYN+LI   C  G ++ 
Sbjct: 364 KGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNA 422

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           AL++ D+M R G+ P+++T   +I   C    ++EA  +F  +       + + F  L  
Sbjct: 423 ALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLID 482

Query: 550 RYRRMKESDKARDIHQKWL 568
              +    D A  +++K L
Sbjct: 483 GLGKCGRVDDAYSLYEKML 501



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 43/301 (14%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E  +    M++ G   C L+T    + AVI   C  GK+  A  L  +M  KG  P V+T
Sbjct: 597 ETYELFYAMKEQG---CVLDT--HAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVT 651

Query: 156 HNYLVNELCKI-----------------------------------GDLEKADHVIREMS 180
           +  +++ L KI                                   G +++A  ++ E+ 
Sbjct: 652 YGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELM 711

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   +PN  T+N  +    +  E+++AL  F +M +    PN++T++IL++ LC+     
Sbjct: 712 QKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFN 771

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A  F  E+          + IT T ++    K G+  +A  L++         D  +YN
Sbjct: 772 KAFVFWQEM---QKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYN 828

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I G         A+A F +   +G      T   LL+ L K   L++A+    VL +T
Sbjct: 829 AMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKET 888

Query: 361 G 361
            
Sbjct: 889 A 889


>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
          Length = 536

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 182/389 (46%), Gaps = 41/389 (10%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           TYN      C+    D A  +F  M ++G+ PN      LV +  +KG L  A   L   
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--- 161

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           L   + +    V+ S  L+++  K      A+ L+++  +     D   +N+LI G C  
Sbjct: 162 LQSFEVEGCCMVVNS--LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGV 219

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH-FYGVLSKTGVAPDQIS 368
           G    A      M   G  PD++TYNTL+   CK  +L++AS  F  V S +  +PD ++
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y ++I G C  G + +A   L  ML   + P    +NV++DGY + G++  A  IR  M+
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN----- 483
           SFG   +V TF +LI    R G +   F L +EM   G+FP+ FTY++LI A CN     
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399

Query: 484 ------------------------------LGHIHLALQLYDEMLRRGITPDIITYTELI 513
                                          G ++ A  + +EM ++   PD IT+T LI
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459

Query: 514 KGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
            GHC +G M EA  +F K+  +G + D I
Sbjct: 460 IGHCMKGRMFEAVSIFHKMVAIGCSPDKI 488



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 178/351 (50%), Gaps = 3/351 (0%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N L+N L K+  +E A  +  E    +   +  T+N  I G C V + +KAL L   M+ 
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G  P+ VT+N L+   CK   L  A +   +V        + DV+T T ++  Y K G 
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV--KSGSVCSPDVVTYTSMISGYCKAGK 292

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A +L +DM +  I    V +NVL++G+   G++ +A     +M+  G  PDV+T+ +
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L++  C+ G++ +    +  ++  G+ P+  +Y  +I  LC    ++KARE L  +  K 
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           ++P+P ++N +IDG+ + G ++ A  I + M       +  TF  LI+     G +F+A 
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           S+  +M+  G  PD  T + L+      G    A  L +++ R+G + +++
Sbjct: 473 SIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKGQSNNVV 522



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 153/321 (47%), Gaps = 5/321 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D +    +IR LC  GK   AL L   M   G  PD++T+N L+   CK  +L KA  + 
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264

Query: 177 REM-SEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           +++ S    SP+  TY + I+GYC+  ++ +A  L   M   GI P  VT N+LV    K
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
            G +  A +  G++++        DV+T T L+D Y + G   Q   LW +M  + +  +
Sbjct: 325 AGEMLTAEEIRGKMISFG---CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN 381

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYG 355
              Y++LIN  C    +  A     Q+  +  +P    YN +++  CK GK++EA+    
Sbjct: 382 AFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441

Query: 356 VLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCG 415
            + K    PD+I++  +I G C+ G + +A      M+     P+    + ++    + G
Sbjct: 442 EMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501

Query: 416 DLSNAFSIRDLMLSFGVSSNV 436
               A+ +  +    G S+NV
Sbjct: 502 MAKEAYHLNQIARK-GQSNNV 521



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 3/237 (1%)

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           TYN L   LCK G  D A   +  +   GV+P+      ++      G +  A   LL  
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
            E  V     + N +++   +   + +A  + D  L F   ++  TFN LI      G  
Sbjct: 165 FE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI-TPDIITYTE 511
             A  L   M   G  PD+ TYN LI   C    ++ A +++ ++    + +PD++TYT 
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           +I G+C  G M+EA  +   +  LG+   ++ F +L   Y +  E   A +I  K +
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 114/274 (41%), Gaps = 3/274 (1%)

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
           F+ NI+     YN+L    C  G    A   F  M   G  P+      L++   ++GKL
Sbjct: 95  FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
             A+    +L    V    +   +++  L     +  A +     L      +   +N++
Sbjct: 155 HFATAL--LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I G    G    A  +  +M  FG   ++ T+N LI    +   +  A  + K++    +
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272

Query: 468 F-PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             PDV TY  +I   C  G +  A  L D+MLR GI P  +T+  L+ G+   G M  AE
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           E+  K+ + G   D + F  L   Y R+ +  + 
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366


>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
 gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 624

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 201/415 (48%), Gaps = 3/415 (0%)

Query: 133 KIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYN 192
           +I   L + R+M+  G    V +   +V  LC+ G++EK+  +I+E S     P   TYN
Sbjct: 204 RIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYN 263

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
             I  Y +  +      +   M  +G+  N+VT+ +L+    K G + DA K   E+   
Sbjct: 264 TIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM--- 320

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
            +    SDV   T L+    + G+  +A  L++++ +K +      Y  LI+G C  G++
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
            +A     +M  +G     + +NTL++  C++G +DEAS  Y V+ + G   D  +  TI
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
                      +A+++L  M+E  V      +  +ID Y + G++  A  +   M S GV
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             N  T+N +I A  + G I +A  L+  M  +G+ PD +TY  LI   C   ++  A++
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMR 560

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           L+ EM  +G+  + +TYT +I G    G   EA  ++ +++  G  ID+  +  L
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTAL 615



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 177/366 (48%), Gaps = 3/366 (0%)

Query: 195 ITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDD 254
           + G CR  E++K+  L    +  GI+P   T+N +++A  K+      V+ + +V+  D 
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS-GVEGVLKVMKKDG 289

Query: 255 GKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISS 314
                + +T T+LM+   KNG    A  L+++M ++ I++D+  Y  LI+  C  G++  
Sbjct: 290 --VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           AF  F ++ ++G  P   TY  L++ +CK G++  A      +   GV   Q+ + T+I 
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
           G C  G + +A      M +K    +    N I   + R      A      M+  GV  
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL 467

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           +  ++  LI    + G++ +A  L  EM   G+ P+  TYN++I A C  G I  A +L 
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLR 527

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
             M   G+ PD  TYT LI G C   N+ EA  +F+++   GL  + + + ++     + 
Sbjct: 528 ANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 587

Query: 555 KESDKA 560
            +SD+A
Sbjct: 588 GKSDEA 593



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 163/370 (44%), Gaps = 38/370 (10%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M + G V + +T+  L+    K G +  A+ +  EM E     +   Y + I+  CR   
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           + +A  LF  +   G+ P+  T+  L+  +CK G +G A   + E+     G   + V+ 
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM--QSKGVNITQVVF 402

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           +T L+D Y + G   +A  +++ M QK  Q D+   N + + F        A  +  +M+
Sbjct: 403 NT-LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           + G     ++Y  L++  CK+G ++EA   +  +S  GV P+ I+Y  +I   C  G I 
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +AR+                                   +R  M + G+  + +T+ +LI
Sbjct: 522 EARK-----------------------------------LRANMEANGMDPDSYTYTSLI 546

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
             E    ++ +A  L  EM L G+  +  TY ++I      G    A  LYDEM R+G T
Sbjct: 547 HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYT 606

Query: 504 PDIITYTELI 513
            D   YT LI
Sbjct: 607 IDNKVYTALI 616



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 8/305 (2%)

Query: 104 MRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNEL 163
           MR+ G     +E+D   + ++I   C  G +  A  L  ++ +KG  P   T+  L++ +
Sbjct: 320 MRERG-----IESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGV 374

Query: 164 CKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNR 223
           CK+G++  A+ ++ EM     +     +N  I GYCR   +D+A  ++  M   G + + 
Sbjct: 375 CKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADV 434

Query: 224 VTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALAL 283
            T N +     +     +A ++L  ++   +G      ++ T L+D Y K G+  +A  L
Sbjct: 435 FTCNTIASCFNRLKRYDEAKQWLFRMM---EGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
           + +M  K +Q + + YNV+I  +C  G I  A      M   G  PD  TY +L++  C 
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECI 551

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
              +DEA   +  +   G+  + ++Y  +I GL   G   +A      M  K    +  +
Sbjct: 552 ADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611

Query: 404 WNVII 408
           +  +I
Sbjct: 612 YTALI 616



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/372 (22%), Positives = 154/372 (41%), Gaps = 38/372 (10%)

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
            F+    +   +D  L +F  M ++G++    +  I+V  LC++G +  + K + E    
Sbjct: 194 VFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSV- 252

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                                                K I+ +   YN +IN +    D 
Sbjct: 253 -------------------------------------KGIKPEAYTYNTIINAYVKQRDF 275

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
           S        M K G + + +TY  L+    K GK+ +A   +  + + G+  D   Y ++
Sbjct: 276 SGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL 335

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I   C  G++ +A      + EK + P  + +  +IDG  + G++  A  + + M S GV
Sbjct: 336 ISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           +     FN LI    R G + +A  +   M   G   DVFT N +      L     A Q
Sbjct: 396 NITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQ 455

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
               M+  G+    ++YT LI  +C  GN++EA+ +F ++ + G+  + I + ++   Y 
Sbjct: 456 WLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYC 515

Query: 553 RMKESDKARDIH 564
           +  +  +AR + 
Sbjct: 516 KQGKIKEARKLR 527



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 119/256 (46%)

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
           NG        F  M+K+G   D  +    L    K+ ++D     +  +  +GV     S
Sbjct: 167 NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYS 226

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
              +++GLC  G++ K+++ +     K + PE + +N II+ Y +  D S    +  +M 
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             GV  N  T+  L+    + G + DA  L  EM   GI  DV  Y  LI  +C  G++ 
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
            A  L+DE+  +G++P   TY  LI G C  G M  AE +  ++Q+ G+ I  + F  L 
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406

Query: 549 KRYRRMKESDKARDIH 564
             Y R    D+A  I+
Sbjct: 407 DGYCRKGMVDEASMIY 422



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 9/222 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +I   C  G +  A  +   M QKG   DV T N + +   ++   ++A   +  M E 
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG 463

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
               +  +Y   I  YC+   +++A  LF  M++ G++PN +T+N++++A CK+G + +A
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523

Query: 243 VKFLGEVLA---DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
            K    + A   D D    + +I    + D    N D  +A+ L+++M  K +  + V Y
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLIHGECIAD----NVD--EAMRLFSEMGLKGLDQNSVTY 577

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            V+I+G    G    AF  + +M ++G+  D   Y  L+  +
Sbjct: 578 TVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 166/330 (50%), Gaps = 3/330 (0%)

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           G  PN    NIL+H  CK G + +A     E+           V++   L+  Y ++ + 
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEI---SRRGLRPSVVSFNTLISGYCRSKNV 277

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            +   L + M  + I  D+  Y+ LING C    +  A   F +M + G +P+ +T+ TL
Sbjct: 278 EEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTL 337

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           ++  CK GK+D A   + ++   G+ PD I+Y  +I GLC  GD+ +AR+ L  M+    
Sbjct: 338 IDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGF 397

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P+   +  ++DG  + GD+ +A  I+D M+  G+  +   F ALI    R G + DA  
Sbjct: 398 KPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAER 457

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           + K+ML  G  PD  TY ++I   C  G + +  +L  EM R G  P ++TY  L+ G C
Sbjct: 458 MLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFC 517

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +G MK A+ +   +  + +  + I F IL
Sbjct: 518 KQGQMKNAKMLLHAMLNMEVVPNDITFNIL 547



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 190/388 (48%), Gaps = 6/388 (1%)

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           R + L  + G       +++  G  P+V   N L++  CKIGD+  A  V  E+S     
Sbjct: 199 RVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLR 258

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           P+  ++N  I+GYCR   +++   L S M +  I P+  T++ L++ LCK+  + +A   
Sbjct: 259 PSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGL 318

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
             E+    +     + +T T L+D   K+G    AL  +  M  + I+ D++ YN LING
Sbjct: 319 FDEMC---EMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALING 375

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C +GD+  A     +M+  GF PD IT+ TL++  CK G +D A      + + G+  D
Sbjct: 376 LCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELD 435

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            +++  +I GLC  G +  A   L  ML     P+   + ++ID + + GD+     +  
Sbjct: 436 DVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLK 495

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            M   G    V T+NAL+    + G + +A  L   ML   + P+  T+N+L+   C  G
Sbjct: 496 EMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELI 513
              +  ++++    +G+  D  +YT L+
Sbjct: 556 S-SVDFKIFNG--EKGLVSDYASYTALV 580



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 172/358 (48%), Gaps = 6/358 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++   C  G +  A  +  ++ ++G  P V++ N L++  C+  ++E+   +   M   R
Sbjct: 232 LMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESER 291

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP+  TY+A I G C+ + +++A  LF  M   G+ PN VT   L+   CK G +  A+
Sbjct: 292 ISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLAL 351

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +   E++ D   +   D+IT   L++   ++GD  +A  L N+M     + D + +  L+
Sbjct: 352 RNF-EIMKDRGIRP--DLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLM 408

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G C +GD+ SA     +M++ G   D + +  L++ LC+ G++ +A      +   G  
Sbjct: 409 DGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHK 468

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD  +Y  +I   C  GD+    + L  M     VP    +N +++G+ + G + NA  +
Sbjct: 469 PDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKML 528

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
              ML+  V  N  TFN L+    + GS  D      E    G+  D  +Y  L+  S
Sbjct: 529 LHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFNGE---KGLVSDYASYTALVNES 583



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 135/302 (44%), Gaps = 38/302 (12%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   + A+I  LC   ++  A  L  +M + G VP+ +T   L++  CK G ++ A 
Sbjct: 292 ISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLAL 351

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
                M +    P+  TYNA I G CR  +L +A  L + M  NG +P+++T   L+   
Sbjct: 352 RNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGC 411

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C                                      K+GD   AL + + M ++ I+
Sbjct: 412 C--------------------------------------KDGDMDSALEIKDRMVEEGIE 433

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D VA+  LI+G C +G +  A      ML  G  PD  TY  +++C CK+G +   +  
Sbjct: 434 LDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKL 493

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + + G  P  ++Y  ++ G C  G +  A+  L +ML   VVP    +N+++DG+ +
Sbjct: 494 LKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCK 553

Query: 414 CG 415
            G
Sbjct: 554 HG 555



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 118/240 (49%)

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
           LN      + ++ ++L  G+ P+V  +N L++  CK G +  A   +  +S+ G+ P  +
Sbjct: 203 LNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVV 262

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           S+ T+I G C   ++ +       M  + + P+   ++ +I+G  +   +  A  + D M
Sbjct: 263 SFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEM 322

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
              G+  N  TF  LI  + + G I  A    + M   GI PD+ TYN LI   C  G +
Sbjct: 323 CEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDL 382

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             A +L +EM+  G  PD IT+T L+ G C  G+M  A E+  ++   G+ +D + F  L
Sbjct: 383 KEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTAL 442



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 108/216 (50%)

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
           FY  +   G  P+   +  ++ G C  GD++ AR     +  + + P    +N +I GY 
Sbjct: 213 FYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYC 272

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           R  ++   F ++ +M S  +S +VFT++ALI    +   + +A  L  EM   G+ P+  
Sbjct: 273 RSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGV 332

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           T+  LI   C  G I LAL+ ++ M  RGI PD+ITY  LI G C  G++KEA ++  ++
Sbjct: 333 TFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEM 392

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
              G   D I F  L     +  + D A +I  + +
Sbjct: 393 IGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMV 428



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 91/177 (51%)

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           EF L +L+    P  +++N+++ G+ + GD+ NA  + D +   G+  +V +FN LI   
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            R  ++ + F LK  M  + I PDVFTY+ LI   C    +  A  L+DEM   G+ P+ 
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNG 331

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           +T+T LI G C  G +  A   F  ++  G+  D I +  L     R  +  +AR +
Sbjct: 332 VTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKL 388



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 74/153 (48%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E D     A+I  LC  G++  A  + + M+  G  PD  T+  +++  CK GD++   
Sbjct: 432 IELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGA 491

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +++EM      P   TYNA + G+C+  ++  A  L   M N  + PN +T NIL+   
Sbjct: 492 KLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGH 551

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           CK G   D   F GE     D  + + ++  +I
Sbjct: 552 CKHGSSVDFKIFNGEKGLVSDYASYTALVNESI 584


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 192/376 (51%), Gaps = 3/376 (0%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N ++NE      LE  D+V+     M  SPN  ++N  I   C++  +D+A+ +F  M  
Sbjct: 156 NVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPE 215

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
               P+  T+  L+  LCK+  + +AV  L E+    +G + S VI + +L+D   K GD
Sbjct: 216 KKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM--QSEGCSPSPVIYN-VLIDGLCKKGD 272

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +   L ++MF K    + V YN LI+G CL G +  A +   +M+    +P+ +TY T
Sbjct: 273 LSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L+N L KQ +  + +     + + G   +Q  Y  +I GL   G   +A      M EK 
Sbjct: 333 LINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKG 392

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P   +++ +IDG  R G  + A  I + M+S G   NV+T+++L+    + G   +A 
Sbjct: 393 CRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAI 452

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            + +EM   G   + F Y++LI   C +G +  A+ ++ +ML  GI PD + Y+ +IKG 
Sbjct: 453 QVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGL 512

Query: 517 CARGNMKEAEEVFAKI 532
           C  G+M  A +++ ++
Sbjct: 513 CGIGSMDAALKLYHEM 528



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 187/388 (48%), Gaps = 6/388 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI+ LC  G +  A+ + R M +K  +PD  T+  L++ LCK   +++A  ++ EM    
Sbjct: 193 VIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
            SP+   YN  I G C+  +L +   L   M   G  PN VT+N L+H LC KG L  AV
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAV 312

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L  +++    K   + +T   L++   K         L   M ++  + +   Y+VLI
Sbjct: 313 SLLERMVSS---KCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLI 369

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G    G    A   + +M ++G  P+++ Y+ +++ LC++GK +EA      +  +G  
Sbjct: 370 SGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCL 429

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+  +Y ++++G    G   +A +    M E         ++V+IDG    G +  A  +
Sbjct: 430 PNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMV 489

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD---GIFPDVFTYNLLIGA 480
              ML+ G+  +   ++++I      GS+  A  L  EML        PDV TYN+L+  
Sbjct: 490 WSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDG 549

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIIT 508
            C    +  A+ L + ML RG  PD+IT
Sbjct: 550 LCMQKDVSRAVDLLNCMLDRGCDPDVIT 577



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 193/408 (47%), Gaps = 8/408 (1%)

Query: 170 EKA-DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG----IRPNRV 224
           EKA D   R + E R   +  ++N+ +          + L  +  + N+     I PN +
Sbjct: 129 EKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGL 188

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           + N+++ ALCK G +  A++    +    + K   D  T   LMD   K     +A+ L 
Sbjct: 189 SFNLVIKALCKLGFVDRAIEVFRGM---PEKKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           ++M  +      V YNVLI+G C  GD+S        M  +G  P+ +TYNTL++ LC +
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLK 305

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
           GKLD+A      +  +   P+ ++Y T+I GL      +     L+SM E+      HI+
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIY 365

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLL 464
           +V+I G  + G    A ++   M   G   N+  ++A+I    R G   +A  +   M+ 
Sbjct: 366 SVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMIS 425

Query: 465 DGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKE 524
            G  P+V+TY+ L+      G    A+Q++ EM   G + +   Y+ LI G C  G +KE
Sbjct: 426 SGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKE 485

Query: 525 AEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRNK 572
           A  V++K+ T+G+  D + +  + K    +   D A  ++ + L + +
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEE 533



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 180/393 (45%), Gaps = 13/393 (3%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++  LC   +I  A+ L  +M  +G  P  + +N L++ LCK GDL +   ++
Sbjct: 221 DGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLV 280

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M      PN  TYN  I G C   +LDKA+ L   M ++   PN VT+  L++ L K+
Sbjct: 281 DNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQ 340

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
               D  + L  +  ++ G   +  I S +L+   FK G   +A+ LW  M +K  + +I
Sbjct: 341 RRAMDGARLL--ISMEERGYRLNQHIYS-VLISGLFKEGKAEEAMTLWKKMAEKGCRPNI 397

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y+ +I+G C  G  + A      M+  G LP+V TY++L+    K G  +EA   +  
Sbjct: 398 VVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWRE 457

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + +TG + ++  Y  +I GLC  G + +A      ML   + P+   ++ +I G    G 
Sbjct: 458 MDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGS 517

Query: 417 LSNAFSIRDLML---SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
           +  A  +   ML         +V T+N L+        +  A  L   ML  G  PDV T
Sbjct: 518 MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVIT 577

Query: 474 YNLLIGA------SCNLGHIHLALQLYDEMLRR 500
            N  +        SC  G   L  +L   +L+R
Sbjct: 578 CNTFLNTLSEKSDSCEEGRSFLE-ELVARLLKR 609



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 14/257 (5%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + AVI  LC  GK   A  +   MI  G +P+V T++ L+    K G  E+A  V REM 
Sbjct: 400 YSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMD 459

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           E   S N   Y+  I G C V  + +A+ ++S M   GI+P+ V ++ ++  LC  G + 
Sbjct: 460 ETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMD 519

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A+K   E+L  ++ K+  DV+T  IL+D      D  +A+ L N M  +    D++  N
Sbjct: 520 AALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCN 579

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
             +N      D             R FL +++        L K+ ++  A     V+   
Sbjct: 580 TFLNTLSEKSDSCEE--------GRSFLEELVAR------LLKRQRVSGACKIVEVMLGK 625

Query: 361 GVAPDQISYKTIIQGLC 377
            +AP   ++  I+  +C
Sbjct: 626 YLAPKTSTWAMIVPEIC 642


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 218/485 (44%), Gaps = 39/485 (8%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  +Y  + A+I   C  G I  A     +M +K  VP+V+T++ L+N   K G L  A 
Sbjct: 111 LVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAF 170

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V+R+M      PN  TY   + G  +    D AL L+S M   G++ N    +  V+ +
Sbjct: 171 KVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNM 230

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            + G + +A + + ++ +   G    D++  T LMD + K+G    AL L  +M  KN+ 
Sbjct: 231 KRSGRMEEAEELVAKMAS---GGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 287

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DIV +NVLIN     G  S   + +  M + G  PD+ TYNT+LN   K+G    A   
Sbjct: 288 FDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALEL 346

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP-------------- 399
           +  +    + P+ I+   +I GLC  G +  A + L  M+   + P              
Sbjct: 347 WNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSK 406

Query: 400 ---------------------EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
                                +  ++N++I    + G    A ++   M   G+ ++  T
Sbjct: 407 SRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTT 466

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +NALI        +  AF     ML + + PD+ TYNLL+G     G IH A  L  E+ 
Sbjct: 467 YNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIK 526

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
           +RG+ P+  TY  L+ GHC   N KE   ++ ++   G       + +L   + +M +  
Sbjct: 527 KRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMK 586

Query: 559 KARDI 563
           +A+++
Sbjct: 587 QAKEL 591



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 212/474 (44%), Gaps = 39/474 (8%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+I  A +L   + Q   VP+ +T++ L++  CK+GD+  A+  + EM E    PN  TY
Sbjct: 94  GQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITY 153

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           ++ I GY +   L  A  +   M +    PN  T+ IL+    K G    A+    ++  
Sbjct: 154 SSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKM-- 211

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
              G    +V      +++  ++G   +A  L   M    ++ D+V Y  L++GF  +G 
Sbjct: 212 -KQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGK 270

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           +SSA     +M  +  + D++T+N L+NCL K GK D  S  Y  + + G++PD  +Y T
Sbjct: 271 VSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTES-IYSAMREMGLSPDLATYNT 329

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           ++ G    G+   A E    M  + ++P     N++I+G    G + NA  I   M+  G
Sbjct: 330 MLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMG 389

Query: 432 VSSNVFT-----------------------------------FNALILAETRGGSIFDAF 456
           +     T                                   +N LI    + G    A 
Sbjct: 390 LYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKAT 449

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
           ++ K+M   GI  D  TYN LI   C   H+  A   Y  ML   ++PDI TY  L+ G 
Sbjct: 450 AVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGL 509

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
              G + EA+++ ++I+  GL  +   +  L   + +++ + +   I+ + +++
Sbjct: 510 SKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIK 563



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 197/416 (47%), Gaps = 14/416 (3%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL L  KM Q G   +V   +  VN + + G +E+A+ ++ +M+     P+   Y   + 
Sbjct: 204 ALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMD 263

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG-----LLGDAVKFLGEVLA 251
           G+ +  ++  AL+L   M +  +  + VT N+L++ L K G      +  A++ +G    
Sbjct: 264 GFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESIYSAMREMG---- 319

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                 + D+ T   +++  FK G+   AL LWN+M  + +  + +  N++ING C  G 
Sbjct: 320 -----LSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGR 374

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           + +A     +M+  G  P   TY  LLN   K  + D     + +L    +  D+  Y  
Sbjct: 375 MENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNI 434

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I  LC  G   KA   L  M E+ ++ +   +N +I GY     L  AF     MLS  
Sbjct: 435 LISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSER 494

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           VS ++ T+N L+   ++ G I +A  L  E+   G+ P+  TY  L+   C + +    L
Sbjct: 495 VSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECL 554

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++Y EM+ +G  P    Y  LI      G MK+A+E+  ++QT G++     + IL
Sbjct: 555 RIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDIL 610



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 204/427 (47%), Gaps = 14/427 (3%)

Query: 144 MIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE 203
           M+  G  PDV+T   ++  LCK G L +   ++REM +M  + N  +Y   +    +  +
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVIT 263
           + +AL   + M   G   + +   +L+  L K G + +A      +   +      + IT
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLN---LVPNYIT 117

Query: 264 STILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
            + L+DS  K GD   A +  ++M +K+   +++ Y+ LING+   G +  AF    +M+
Sbjct: 118 YSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMV 177

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
            +  +P++ TY  LL+   K G  D A   Y  + + G+  +       +  +   G + 
Sbjct: 178 HKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRME 237

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A E +  M    + P+   +  ++DG+ + G +S+A ++   M S  V  ++ TFN LI
Sbjct: 238 EAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLI 297

Query: 444 -----LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
                L ++   SI+ A    +EM   G+ PD+ TYN ++  +   G+   AL+L++EM 
Sbjct: 298 NCLFKLGKSDTESIYSAM---REM---GLSPDLATYNTMLNGNFKKGNWTSALELWNEMK 351

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
            R + P+ IT   +I G C  G M+ A ++  ++  +GL      +RIL     + + +D
Sbjct: 352 SRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRAD 411

Query: 559 KARDIHQ 565
                H+
Sbjct: 412 TILQTHE 418



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 172/362 (47%), Gaps = 33/362 (9%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  ++      GK+ +AL L ++M  K  V D++T N L+N L K+G     +
Sbjct: 251 LKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTE 309

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M EM  SP+ ATYN  + G  +      AL L++ M +  + PN +T NI+++ L
Sbjct: 310 SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGL 369

Query: 234 CKKGLLGDAVKFLGE--------------VLADDDGKAT-SDVITST------------- 265
           C+ G + +A+  L E              +L +   K+  +D I  T             
Sbjct: 370 CEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDK 429

Query: 266 ----ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
               IL+ +  K G   +A A+  DM ++ I  D   YN LI+G+C++  +  AF  +  
Sbjct: 430 DVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYST 489

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           ML     PD+ TYN LL  L K G + EA      + K G+ P+  +Y+T++ G C   +
Sbjct: 490 MLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRN 549

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
             +       M+ K  +P+P  +N++I  + + G +  A  + + M + GVS    T++ 
Sbjct: 550 TKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDI 609

Query: 442 LI 443
           LI
Sbjct: 610 LI 611



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 135/285 (47%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M    I  D+V +  ++ G C +G +S       +M K G   + ++Y  LL+ L K GK
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           + EA      +   G   D I+   +I GL   G I +A     ++ + ++VP    ++ 
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +ID   + GD++ A S    M       NV T+++LI    + G + DAF + ++M+   
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
             P++ TY +L+  S   G   +AL LY +M + G+  ++      +      G M+EAE
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 240

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           E+ AK+ + GL  D + +  L   + +  +   A ++ Q+   +N
Sbjct: 241 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKN 285



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 15/253 (5%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   L+ D   +  +I +LC  G    A  + + M ++G + D  T+N L++  C    L
Sbjct: 421 VNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHL 480

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A      M   R SP+  TYN  + G  +   + +A  L S +   G+ PN  T+  L
Sbjct: 481 KRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETL 540

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +   CK     + ++   E++               +L+  + K G   QA  L N+M  
Sbjct: 541 MCGHCKVRNTKECLRIYCEMVIKG---FIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQT 597

Query: 290 KNIQTDIVAYNVLINGFC-------LNGDI-----SSAFAYFCQMLKRGFLPDVITYNTL 337
           K +      Y++LI G+C       L   +     + A   F +M  RGF+P   T   +
Sbjct: 598 KGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVPCESTQACI 657

Query: 338 LNCLCKQGKLDEA 350
            +     GK  +A
Sbjct: 658 SSTFAAPGKKADA 670


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 185/395 (46%), Gaps = 4/395 (1%)

Query: 132 GKIGTA-LWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           GKI  A  WL   MIQ+G +PD  T   +++ LC+ G + +A    R+M ++   PN   
Sbjct: 254 GKIQEADRWLS-GMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLIN 312

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           + + I G C+   + +A  +   M  NG +PN  TH  L+  LCK+G    A +   +++
Sbjct: 313 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 372

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             D  K   +V T T ++  Y K     +A  L++ M ++ +  ++  Y  LING C  G
Sbjct: 373 RSDIYKP--NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAG 430

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
           +   A+     M   GF P++ TYN +++ LCK+ +  EA          G+  D ++Y 
Sbjct: 431 NFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYT 490

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +IQ  C   DI +A  F   M +     +  + N++I  + R   +  +  +  L++S 
Sbjct: 491 ILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL 550

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G+     T+ ++I    + G    A      M   G  PD FTY  LI   C    +  A
Sbjct: 551 GLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEA 610

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
            +LY+ M+ RG++P  +T   L   +C R +   A
Sbjct: 611 CKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASA 645



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 156/313 (49%), Gaps = 4/313 (1%)

Query: 122 VAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
            ++I  LC  G I  A  +  +M++ G  P+V TH  L++ LCK G  EKA  +  ++  
Sbjct: 314 TSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR 373

Query: 182 MR-PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  TY + I GYC+ ++L++A  LFS M   G+ PN  T+  L++  CK G   
Sbjct: 374 SDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFD 433

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A + +   L DD+G    ++ T   ++DS  K     +A  L N  F   ++ D V Y 
Sbjct: 434 RAYELMN--LMDDEG-FRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYT 490

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +LI   C   DI  A A+FC+M K GF  D+   N L+   C+Q K+ E+   + ++   
Sbjct: 491 ILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL 550

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P + +Y ++I G C  GD   A ++  +M     VP+   +  +I G  +   +  A
Sbjct: 551 GLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEA 610

Query: 421 FSIRDLMLSFGVS 433
             + + M+  G+S
Sbjct: 611 CKLYEAMIDRGLS 623



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/422 (23%), Positives = 200/422 (47%), Gaps = 4/422 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R+    G++  A+ +   M  +G  P  +T N ++    + G ++ A++V  EMS   
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+ +++   + G  R  ++ +A    S M   G  P+  T  +++ ALC+ GL+  A+
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            +  +++   D     ++I  T L+D   K G   QA  +  +M +   + ++  +  LI
Sbjct: 296 WYFRKMI---DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 352

Query: 304 NGFCLNGDISSAFAYFCQMLKRG-FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +G C  G    AF  F ++++   + P+V TY +++   CK+ KL+ A   +  + + G+
Sbjct: 353 DGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 412

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+  +Y T+I G C  G+  +A E +  M ++   P  + +N +ID   +      A+ 
Sbjct: 413 FPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYE 472

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + +   S G+ ++  T+  LI  + +   I  A +    M   G   D+   N+LI A C
Sbjct: 473 LLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFC 532

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               +  + +L+  ++  G+ P   TYT +I G+C  G+   A + F  ++  G   D  
Sbjct: 533 RQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSF 592

Query: 543 PF 544
            +
Sbjct: 593 TY 594



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 62/411 (15%)

Query: 158 YLV--NELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA 215
           YLV  + L   G+L+KA  V+R M               +  +  +  L++A+ +   M 
Sbjct: 153 YLVTADSLIANGNLQKAHEVMRCM---------------LRNFSEIGRLNEAVGMVMDMQ 197

Query: 216 NNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNG 275
           N G+ P+ +T N ++    + GL+                               Y +N 
Sbjct: 198 NQGLSPSSITMNCVLEIAIESGLI------------------------------DYAEN- 226

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
                  ++++M  + +  D  ++ +++ G   +G I  A  +   M++RGF+PD  T  
Sbjct: 227 -------VFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCT 279

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            +L+ LC+ G ++ A  ++  +   G  P+ I++ ++I GLC  G I +A E L  M+  
Sbjct: 280 LILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN 339

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
              P  +    +IDG  + G    AF +   L+ S     NV T+ ++I    +   +  
Sbjct: 340 GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNR 399

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L   M   G+FP+V TY  LI   C  G+   A +L + M   G  P+I TY  +I 
Sbjct: 400 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVID 459

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
             C +    EA E+  K  + GL  D + + IL      ++E  K  DI Q
Sbjct: 460 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL------IQEQCKQSDIKQ 504



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 128/265 (48%), Gaps = 3/265 (1%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++I   C   K+  A  L  +M ++G  P+V T+  L+N  CK G+ ++A  ++  M 
Sbjct: 384 YTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMD 443

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  TYNA I   C+ +   +A  L +   + G+  + VT+ IL+   CK+  + 
Sbjct: 444 DEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIK 503

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A+ F   +   +     +D+  + IL+ ++ +     ++  L+  +    +      Y 
Sbjct: 504 QALAFFCRM---NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYT 560

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I+G+C  GD   A  YF  M + G +PD  TY +L++ LCK+  +DEA   Y  +   
Sbjct: 561 SMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDR 620

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKA 385
           G++P +++  T+    C   D   A
Sbjct: 621 GLSPPEVTRVTLAYEYCKRNDSASA 645



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 6/235 (2%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           C LE D   +  +I++ C    I  AL    +M + G   D+  +N L+   C+   +++
Sbjct: 480 CGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKE 539

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           ++ + + +  +   P   TY + I+GYC+  + D AL  F  M  +G  P+  T+  L+ 
Sbjct: 540 SERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLIS 599

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKN 291
            LCKK ++ +A K    ++  D G +  +V T   L   Y K  D   A+ +   + +K 
Sbjct: 600 GLCKKSMVDEACKLYEAMI--DRGLSPPEV-TRVTLAYEYCKRNDSASAMIVLEPLDKK- 655

Query: 292 IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
               I     L+   C    +  A  +F ++L++    D +T         + GK
Sbjct: 656 --LWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGK 708


>gi|147789723|emb|CAN67400.1| hypothetical protein VITISV_025966 [Vitis vinifera]
          Length = 550

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 176/365 (48%), Gaps = 5/365 (1%)

Query: 152 DVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLF 211
           D  T+N ++  LC  G L  A  +I  M+     P   +    I G  ++   ++A  + 
Sbjct: 129 DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 188

Query: 212 STMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
             M  +G  P+ +T+N+LV  LCKKGLL  A++ L E+          D IT   ++   
Sbjct: 189 KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSG---CPPDAITYNTILRCM 245

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
           F +G   QA+  W D  +K     ++ Y VLI   C +     A      M   G  PD+
Sbjct: 246 FDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDI 305

Query: 332 ITYNTLLNCLCKQGKL-DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           +TYN+L+N  CKQGK  D A   Y +LS  G+ P+ ++Y T++  LC HG   +  E LL
Sbjct: 306 VTYNSLVNYTCKQGKYEDTALIIYNLLSH-GMGPNTVTYNTLLHSLCTHGYWDEVDEILL 364

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M   S  P    +N++I+G  + G L  A +  D M+S     ++ T+N L+ A  + G
Sbjct: 365 IMNMTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEG 424

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A  L   +      P + TYN++I      G +  A+ LY EM+ RG  PD IT+ 
Sbjct: 425 MVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMGLYGEMIERGFAPDDITHR 484

Query: 511 ELIKG 515
            L  G
Sbjct: 485 TLFWG 489



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 3/202 (1%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           A+ +   M  +G  PD++T+N LVN  CK G  E    +I  +      PN  TYN  + 
Sbjct: 289 AMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLH 348

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
             C     D+   +   M      P  VT+NIL++ LCK GLL  A+ F  ++++ +   
Sbjct: 349 SLCTHGYWDEVDEILLIMNMTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHN--- 405

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              D+IT   L+ +  K G   +AL L + +        ++ YN++I+G    G +  A 
Sbjct: 406 CLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAM 465

Query: 317 AYFCQMLKRGFLPDVITYNTLL 338
             + +M++RGF PD IT+ TL 
Sbjct: 466 GLYGEMIERGFAPDDITHRTLF 487



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 10/219 (4%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +++   C  GK      +   ++  G  P+ +T+N L++ LC  G  ++ D ++  M+  
Sbjct: 310 SLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNMT 369

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P   TYN  I G C+   LD+A++ F  M ++   P+ +T+N L+ ALCK+G++ +A
Sbjct: 370 SQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEA 429

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  L  +   +D + +  +IT  I++D   K G   +A+ L+ +M ++    D + +  L
Sbjct: 430 LHLLHSL---NDTRCSPGLITYNIVIDGLAKKGCMEKAMGLYGEMIERGFAPDDITHRTL 486

Query: 303 INGFCLNGDISSAFAYFCQMLKR-------GFLPDVITY 334
             G      +  A     +M KR        F PD + +
Sbjct: 487 FWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRPDPLKH 525



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 95/218 (43%)

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           D  T N +L  LC +GKL  AS    V+++    P   S   +I+GL       +A   L
Sbjct: 129 DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 188

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
             M+    +P+   +N+++ G  + G L  A  + D M   G   +  T+N ++      
Sbjct: 189 KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDH 248

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           G    A    K+ L  G    + TY +LI   C       A+++ ++M   G  PDI+TY
Sbjct: 249 GGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTY 308

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             L+   C +G  ++   +   + + G+  + + +  L
Sbjct: 309 NSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTL 346



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 2/187 (1%)

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE-PHIWNVIIDGYGRCGDLSNA 420
           V  D+ +   I+Q LC  G +V A   +  M  ++ +P  P   N +I G  +      A
Sbjct: 126 VGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCIN-LIRGLIKLESTERA 184

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             +  +M+  G   ++ T+N L+    + G +  A  L  EM L G  PD  TYN ++  
Sbjct: 185 TRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRC 244

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
             + G    A+  + + LR+G    +ITYT LI+  C      +A EV   +   G   D
Sbjct: 245 MFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPD 304

Query: 541 HIPFRIL 547
            + +  L
Sbjct: 305 IVTYNSL 311


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 211/445 (47%), Gaps = 16/445 (3%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL +  +M++   +P+V T + L++ LCK G+++ A H+  EM++    P+  TY   I+
Sbjct: 180 ALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVIS 239

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
           G CR   +D A  LF  M ++G+ P+ VT N L++  C    + +A   L   L + DG 
Sbjct: 240 GLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLR--LFEKDGY 297

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              DV   + L+   F+         L+  M + N++ D+  Y +++ G    G +  A 
Sbjct: 298 VL-DVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDAL 356

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M + G +PD + YN L+   C  G L EA      +S+    P+  +Y  +I G+
Sbjct: 357 ELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGM 416

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI-------RD---- 425
           C +G    A+E    M +    P    +N +IDG  + G L  A  +       R+    
Sbjct: 417 CRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLF 476

Query: 426 LMLSFGVSS--NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
           L LS G S   +  +   ++      G I  A+ +  ++   G  P ++TYN+L+   C 
Sbjct: 477 LRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCK 536

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
           LG+ + A +L+ EM  +G++PD +TY  LI G       ++A +VF +++  G   D   
Sbjct: 537 LGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAV 596

Query: 544 FRILKKRYRRMKESDKARDIHQKWL 568
           +R +     R  E  +A  +  K+L
Sbjct: 597 YRTMMTWMCRRMELPRAFSLWLKYL 621



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 169/344 (49%), Gaps = 3/344 (0%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            +   I  Y ++   DKA+  F +M +    P+  T+N+++  L +K  L  A+     +
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRM 187

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +  +      +V T +IL+D   K+G+   AL L+++M Q+ I  D   Y V+I+G C +
Sbjct: 188 MKLN---CLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRS 244

Query: 310 GDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
             +  A+  F +M   G  PD +T N LLN  C   ++DEA     +  K G   D   Y
Sbjct: 245 KRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGY 304

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
             +I+GL         +     M+E +V P+ +++ +++ G    G + +A  + + M  
Sbjct: 305 SCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTE 364

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            GV  +   +N LI      G + +A SL+ E+     FP+V TY++LI   C  G    
Sbjct: 365 SGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRD 424

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           A ++++EM + G  P  +T+  LI G C  G +++A  +F K++
Sbjct: 425 AQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKME 468



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 164/346 (47%), Gaps = 3/346 (0%)

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
           N L+        + N GI+ +     +L+    K GL   A++  G +    D   T DV
Sbjct: 105 NGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSM---RDFDCTPDV 161

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
            T  +++D   +      AL ++  M + N   ++  +++LI+G C +G++  A   F +
Sbjct: 162 YTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDE 221

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M +RG LPD  TY  +++ LC+  ++D+A   +  +  +GV PD ++   ++ G C+   
Sbjct: 222 MTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDR 281

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + +A   L    +   V +   ++ +I G  R     +   +   M+   V  +V+ +  
Sbjct: 282 VDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTI 341

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           ++      G + DA  L  EM   G+ PD   YN+LI   C++G +  A  L  E+ R  
Sbjct: 342 MMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHD 401

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             P++ TY+ LI G C  G  ++A+E+F +++ LG     + F  L
Sbjct: 402 CFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSL 447



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 198/466 (42%), Gaps = 55/466 (11%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           ++ D   +  +++ L   GK+  AL L  +M + G VPD + +N L+   C +G L +A 
Sbjct: 332 VKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEAR 391

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +  E+S     PN  TY+  I+G CR      A  +F+ M   G  P+ VT N L+  L
Sbjct: 392 SLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGL 451

Query: 234 CKKGLLGDAVKFLGEVLADDD-------GKATSDVITSTIL---MDSYFKNGDKFQALAL 283
           CK G L  A     ++    +        +  S V+ S  L   ++    +G   +A  +
Sbjct: 452 CKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRI 511

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
              +        I  YN+L+NGFC  G+ + A+  F +M  +G  PD +TY TL+N L +
Sbjct: 512 LMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLR 571

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
             + ++A   +  + K G  PD   Y+T++  +C   ++ +A    L  L      E   
Sbjct: 572 FQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEA 631

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLM-LSFGVSS---NVFTFNALILAETRG-GSIFDAFSL 458
               I+GY    ++  A  +R L+ + F ++      +    + L +TR  G     F +
Sbjct: 632 IKA-IEGYFEKQEVEKA--VRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLI 688

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            +E            Y ++I   C +  I+  L+  D  L R I  D+  YT + KG+  
Sbjct: 689 LEE------------YKVVITPPCCVKLIYFLLKEGD--LDRAI--DVFLYT-IEKGYLL 731

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
           R  +                      RIL K  RR  E  K R I+
Sbjct: 732 RRRVAN--------------------RILTKLVRRKGEMGKDRAIY 757



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 101/231 (43%)

Query: 341 LCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           L  Q  L+        L   G+     ++  +I+     G   KA E   SM +    P+
Sbjct: 101 LINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPD 160

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
            + +N+I+D   +   L  A ++   M+      NV TF+ LI    + G++ DA  L  
Sbjct: 161 VYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFD 220

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           EM   GI PD FTY ++I   C    +  A +L+D+M   G+ PD +T   L+ G C   
Sbjct: 221 EMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLD 280

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            + EA  +    +  G  +D   +  L +   R K  +  + +++K +  N
Sbjct: 281 RVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDN 331


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 208/437 (47%), Gaps = 6/437 (1%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  GK+  AL +R  M + G  P+VLT N +++ LCK   LE+A  +   M +   +PN
Sbjct: 169 LCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPN 228

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             T+++ I G  +   +D A  L+  M + G  P  + +  L+ +  K G   D  K   
Sbjct: 229 AVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYK 288

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           E++       + D+      MD  FK G+  +  AL+ ++       D  +Y++LI+G  
Sbjct: 289 EMVHTG---CSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLV 345

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
             G  +  +  F  M ++G + D   YN +++  CK GK+++A      +   G  P  +
Sbjct: 346 KAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVV 405

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y ++I GL     + +A           +     +++ +IDG+G+ G +  A+ I + +
Sbjct: 406 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL 465

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +  G++ NV+T+N L+ A  +   I +A    + M      P+  TY++LI   C +   
Sbjct: 466 MQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKF 525

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           + A   + EM + G+ P+ ITYT +I G    GN+ EA  +F++ +  G   D   +  +
Sbjct: 526 NKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAM 585

Query: 548 KKRYRRMKESDKARDIH 564
                 +  ++KA D +
Sbjct: 586 ---IEGLSSANKAMDAY 599



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 198/421 (47%), Gaps = 6/421 (1%)

Query: 129 CLGGK--IGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSP 186
           CLG K  +  AL +  +M ++  VP+V T+N L++ LC+ G L  A  +  +M      P
Sbjct: 134 CLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFP 192

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL 246
           N  T N  I   C+  +L++A  +F  M +    PN VT + L+  L K G + DA    
Sbjct: 193 NVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLY 252

Query: 247 GEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
            ++L   D       I  T L+ S+FK G K     ++ +M       D+   N  ++  
Sbjct: 253 EKML---DCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCV 309

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
              G+     A F ++   GF+PD  +Y+ L++ L K G  +E    +  + + G   D 
Sbjct: 310 FKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDT 369

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDL 426
            +Y  +I G C  G + KA + L  M  K   P    +  +IDG  +   L  A+ + + 
Sbjct: 370 HAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEE 429

Query: 427 MLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGH 486
             S G+  NV  +++LI    + G I +A+ + +E++  G+ P+V+T+N L+ A      
Sbjct: 430 AKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 489

Query: 487 IHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRI 546
           I+ AL  +  M      P+ ITY+ LI G C      +A   + ++Q LGL  + I +  
Sbjct: 490 INEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTT 549

Query: 547 L 547
           +
Sbjct: 550 M 550



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 201/430 (46%), Gaps = 4/430 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK   A  L  +   KG++P V+ +N ++  L K   +E+A  +  EM      PN  T
Sbjct: 103 AGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR-DAVPNVPT 161

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  I   CR  +L+ AL +   M   G+ PN +T NI++  LCK   L +A      + 
Sbjct: 162 YNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM- 220

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             DD   T + +T + L+D   K G    A +L+  M         + Y  LI  F   G
Sbjct: 221 --DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCG 278

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
                   + +M+  G  PD+   NT ++C+ K G+ ++    +  ++  G  PD  SY 
Sbjct: 279 RKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYS 338

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
            +I GL   G   +  E   +M E+  V + H +N +IDG+ + G ++ A+ + + M   
Sbjct: 339 ILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVK 398

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G    V T+ ++I    +   + +A+ L +E   +GI  +V  Y+ LI     +G I  A
Sbjct: 399 GHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEA 458

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKR 550
             + +E++++G+TP++ T+  L+        + EA   F  ++ L    + I + IL   
Sbjct: 459 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILING 518

Query: 551 YRRMKESDKA 560
             R+++ +KA
Sbjct: 519 LCRVRKFNKA 528



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 3/260 (1%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D R +  +I  L   G       L   M ++G V D   +N +++  CK G + KA  ++
Sbjct: 333 DARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLL 392

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM      P   TY + I G  +++ LD+A  LF    +NGI+ N V ++ L+    K 
Sbjct: 393 EEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKV 452

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G + +A   + E++       T +V T   L+D+  K  +  +AL  +  M       + 
Sbjct: 453 GRIDEAYLIMEELMQKG---LTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQ 509

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + Y++LING C     + AF ++ +M K G  P+ ITY T+++ L K G + EAS  +  
Sbjct: 510 ITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSR 569

Query: 357 LSKTGVAPDQISYKTIIQGL 376
               G  PD  SY  +I+GL
Sbjct: 570 FKANGGIPDSASYNAMIEGL 589



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 157/346 (45%), Gaps = 3/346 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + ++IR     G+      + ++M+  G  PD+   N  ++ + K G+ EK   + RE++
Sbjct: 267 YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN 326

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                P+  +Y+  I G  +    ++   LF  M   G   +   +N ++   CK G + 
Sbjct: 327 AHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVN 386

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A + L E+           V+T   ++D   K     +A  L+ +     I+ ++V Y+
Sbjct: 387 KAYQLLEEMKVKGH---PPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYS 443

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+GF   G I  A+    +++++G  P+V T+N LL+ L K  +++EA   +  +   
Sbjct: 444 SLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDL 503

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
              P+QI+Y  +I GLC      KA  F   M +  + P    +  +I G  + G++  A
Sbjct: 504 KCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEA 563

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
             +     + G   +  ++NA+I   +      DA++L +E  L G
Sbjct: 564 SGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKG 609



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 105/246 (42%), Gaps = 15/246 (6%)

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLN----------CLCKQGKLDEASHFYGVLSKTG 361
           +  AF     M K  F P    Y  L+            LCK  +LDEA   +  L +  
Sbjct: 26  LREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQNR 85

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             P   +Y T+I G    G   +A   L     K  +P    +N I+   G+   +  A 
Sbjct: 86  KVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEAL 145

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            I + M    V  NV T+N LI    R G +  A  ++ +M   G+FP+V T N++I   
Sbjct: 146 RIFEEMKRDAVP-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRL 204

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C    +  A  +++ M  +  TP+ +T++ LI G    G + +A  ++ K+   G    H
Sbjct: 205 CKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCG----H 260

Query: 542 IPFRIL 547
           +P  I+
Sbjct: 261 VPGAIV 266



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 43/301 (14%)

Query: 96  ENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLT 155
           E  +    M++ G   C L+T    + AVI   C  GK+  A  L  +M  KG  P V+T
Sbjct: 352 ETYELFYAMKEQG---CVLDT--HAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVT 406

Query: 156 HNYLVNELCKI-----------------------------------GDLEKADHVIREMS 180
           +  +++ L KI                                   G +++A  ++ E+ 
Sbjct: 407 YGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELM 466

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +   +PN  T+N  +    +  E+++AL  F +M +    PN++T++IL++ LC+     
Sbjct: 467 QKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFN 526

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
            A  F  E+          + IT T ++    K G+  +A  L++         D  +YN
Sbjct: 527 KAFVFWQEM---QKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYN 583

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            +I G         A+A F +   +G      T   LL+ L K   L++A+    VL +T
Sbjct: 584 AMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKET 643

Query: 361 G 361
            
Sbjct: 644 A 644


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 225/493 (45%), Gaps = 49/493 (9%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  VI  LC   K+  A  L ++M   G +PDV T+  L++  CK+G +E+A    
Sbjct: 454 DTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWF 513

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM  +  SP+  TY A +  Y +  ++ +A  +F  M + G  PN +T++ LV  LCK 
Sbjct: 514 DEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKA 573

Query: 237 GLLGDAVKFLGEVLADDD---------GKAT----SDVITSTILMDSYFKNGDKFQALAL 283
           G    A +   +++   D         G+ T     +V+T   L+D   K      A  L
Sbjct: 574 GESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQEL 633

Query: 284 WNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCK 343
            + M     + + + Y+ LI+GFC  G + +A   F +M K G+LP V TY +L++ + K
Sbjct: 634 LDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFK 693

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
             +LD A      + ++   P+ ++Y  +I GLC  G+  KA + L  M ++   P    
Sbjct: 694 DRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVT 753

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM- 462
           +  +IDG G+ G +  +  +   M++ G + N  T+  LI      G + +A SL  EM 
Sbjct: 754 YTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK 813

Query: 463 ---------------------------LLD-----GIFPDVFTYNLLIGASCNLGHIHLA 490
                                      LL+     G+      Y LLI +    G +  A
Sbjct: 814 QTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKA 873

Query: 491 LQLYDEMLRRGITPDII---TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           L+L+ EM+    + +I    TYT LI+  C    +++A E++++I   G+  +   F  L
Sbjct: 874 LELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICL 933

Query: 548 KKRYRRMKESDKA 560
            K   ++ + ++A
Sbjct: 934 IKGLIKVNKWNEA 946



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 181/387 (46%), Gaps = 19/387 (4%)

Query: 163 LCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           LC +G  +KA  +I+ M      P+ +TY+  IT  C   +++KA  LF  M + G+ P+
Sbjct: 430 LCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPD 489

Query: 223 RVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALA 282
             T+ IL+ + CK GL+  A  +  E+   +    +  V+T T L+ +Y K     QA  
Sbjct: 490 VYTYTILIDSFCKVGLIEQARSWFDEM---ESVGCSPSVVTYTALLHAYLKTKQVPQASD 546

Query: 283 LWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG---------------- 326
           +++ M       + + Y+ L++G C  G+   A   + +M+                   
Sbjct: 547 IFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDS 606

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             P+V+TY  L++ LCK  K+ +A     V+S  G  P+ I Y  +I G C  G +  A+
Sbjct: 607 IAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQ 666

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           E    M +   +P  H +  +ID   +   L  A  +   ML    + NV T+ A+I   
Sbjct: 667 EVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGL 726

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            R G    A  L   M   G  P+V TY  LI      G + ++LQL+ +M+ +G  P+ 
Sbjct: 727 CRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNY 786

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQ 533
           +TY  LI   CA G + EA  + ++++
Sbjct: 787 VTYRVLINHCCAAGLLDEAHSLLSEMK 813



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 196/447 (43%), Gaps = 25/447 (5%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK------ADHVI 176
           +++   C       A  L  +M   G  P  + +N  +  +C   +L        A+ V 
Sbjct: 349 SLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVY 408

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            EM       N      F    C + + DKA  +   M   G  P+  T++ ++  LC+ 
Sbjct: 409 EEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEA 468

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
             +  A     E+          DV T TIL+DS+ K G   QA + +++M        +
Sbjct: 469 MKVEKAFLLFQEM---KSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSV 525

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           V Y  L++ +     +  A   F +M+  G  P+ ITY+ L++ LCK G+  +A   Y  
Sbjct: 526 VTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAK 585

Query: 357 LSKTG----------------VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPE 400
           +  T                 +AP+ ++Y  +I GLC    +V A+E L  M      P 
Sbjct: 586 MIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPN 645

Query: 401 PHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKK 460
             I++ +IDG+ + G L NA  +   M   G    V T+ +LI A  +   +  A  +  
Sbjct: 646 HIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLS 705

Query: 461 EMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARG 520
           +ML     P+V TY  +I   C +G    AL+L   M +RG  P+++TYT LI G    G
Sbjct: 706 QMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSG 765

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +  + ++F ++ T G A +++ +R+L
Sbjct: 766 KVDMSLQLFTQMITQGCAPNYVTYRVL 792



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 198/461 (42%), Gaps = 35/461 (7%)

Query: 67  KTRHWFSNKDSDNEGNPQAVFNAL------DLILKENLDRLKTMRDTGPVRCTLETDYRR 120
           + R WF   +S         + AL         + +  D    M D G    T+      
Sbjct: 508 QARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTIT----- 562

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMI----------------QKGTVPDVLTHNYLVNELC 164
           + A++  LC  G+   A  +  KMI                     P+V+T+  L++ LC
Sbjct: 563 YSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLC 622

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           K   +  A  ++  MS     PN   Y+A I G+C+V +LD A  +F  M+  G  P   
Sbjct: 623 KAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVH 682

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
           T+  L+ A+ K   L  A+K L ++L   +   T +V+T T ++D   + G+  +AL L 
Sbjct: 683 TYTSLIDAMFKDRRLDLAIKVLSQML---ESSCTPNVVTYTAMIDGLCRIGECQKALKLL 739

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQ 344
           + M ++    ++V Y  LI+G   +G +  +   F QM+ +G  P+ +TY  L+N  C  
Sbjct: 740 SMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAA 799

Query: 345 GKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIW 404
           G LDEA      + +T        Y +++QG       + +   L  +    +V    ++
Sbjct: 800 GLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF--SKKFIASLGLLEELESHGMVSIAPVY 857

Query: 405 NVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF---TFNALILAETRGGSIFDAFSLKKE 461
            ++ID + + G L  A  +   M+    S N+    T+ +LI A      +  AF L  E
Sbjct: 858 GLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSE 917

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           +   G+ P++  +  LI     +   + ALQL   M   G+
Sbjct: 918 ITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 191/463 (41%), Gaps = 28/463 (6%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+++ L   G++     ++++M + G   D  T       LCK G    A  +I      
Sbjct: 212 ALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFK 271

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +  C      I+G    +  D+A+     M  N   PN VT+  L+    KK  LG  
Sbjct: 272 LDTVLC---TQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWC 328

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + +  ++ ++       +  S  L+ SY    D   A  L N M         V YN+ 
Sbjct: 329 KRIIS-MMMNEGCNPNPSLFNS--LVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIF 385

Query: 303 INGFCLNGDISS------AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           I   C   ++ S      A   + +ML    + + +       CLC  GK D+A     +
Sbjct: 386 IGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKL 445

Query: 357 LSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGD 416
           + + G  PD  +Y  +I  LC    + KA      M    V+P+ + + ++ID + + G 
Sbjct: 446 MMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGL 505

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           +  A S  D M S G S +V T+ AL+ A  +   +  A  +   M+  G  P+  TY+ 
Sbjct: 506 IEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSA 565

Query: 477 LIGASCNLGHIHLALQLYDEML----------------RRGITPDIITYTELIKGHCARG 520
           L+   C  G    A ++Y +M+                   I P+++TY  LI G C   
Sbjct: 566 LVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAH 625

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            + +A+E+   + + G   +HI +  L   + ++ + D A+++
Sbjct: 626 KVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEV 668



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/422 (24%), Positives = 187/422 (44%), Gaps = 20/422 (4%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N +V + C+ G   KA   +  + +    P+ ATYNA +       ++D    +   M+ 
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE 235

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI--LMDSYFKN 274
            G   ++ T      ALCK+G   DA+     ++  +D K  + + T  I  LM++   +
Sbjct: 236 LGFCTDKFTVGCFAQALCKEGRWSDALV----MIEREDFKLDTVLCTQMISGLMEASLFD 291

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
               +A++  + M   +   ++V Y  L+ GF     +         M+  G  P+   +
Sbjct: 292 ----EAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLF 347

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N+L++  C       A      ++  G  P  + Y   I  +C  G+ + + + LL++ E
Sbjct: 348 NSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSIC-SGEELPSPD-LLALAE 405

Query: 395 K---SVVPEPHIWNVI-IDGYGRC----GDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
           K    ++    + N +    + RC    G    AF I  LM+  G   +  T++ +I   
Sbjct: 406 KVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFL 465

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
                +  AF L +EM   G+ PDV+TY +LI + C +G I  A   +DEM   G +P +
Sbjct: 466 CEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSV 525

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +TYT L+  +     + +A ++F ++   G A + I +  L     +  ES KA +++ K
Sbjct: 526 VTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAK 585

Query: 567 WL 568
            +
Sbjct: 586 MI 587



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 146/321 (45%), Gaps = 11/321 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  GK+  A  +  +M + G +P V T+  L++ + K   L+ A  V+ +M E 
Sbjct: 651 ALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLES 710

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +PN  TY A I G CR+ E  KAL L S M   G  PN VT+  L+  L K G +  +
Sbjct: 711 SCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMS 770

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           ++   +++         + +T  +L++     G   +A +L ++M Q      +  Y  +
Sbjct: 771 LQLFTQMITQG---CAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSV 827

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           + GF  +    ++     ++   G +     Y  L++   K G+L++A   +  + +   
Sbjct: 828 VQGF--SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSS 885

Query: 363 APDQIS---YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
           + +  S   Y ++IQ LC+   + KA E    +  K VVPE   +  +I G  +    + 
Sbjct: 886 SLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNE 945

Query: 420 AFSIRDLMLSFGV---SSNVF 437
           A  +   M   GV   S+N F
Sbjct: 946 ALQLCYSMCDEGVNWQSNNSF 966


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 212/446 (47%), Gaps = 39/446 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+R LC  G +  A+ L   + ++   PD +T++ L+  L K   L+ A  ++ EM   R
Sbjct: 164 VLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSR 223

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDA 242
             P+   YNA + G  +  E +K + ++  +  + G RPN  T+N+++  LCK G   + 
Sbjct: 224 VQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEV 283

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +    ++A++      DVIT  IL+    ++GD   A  +++++ +  +  D   YN L
Sbjct: 284 GEVWERMVANN---LQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSL 340

Query: 303 INGFCLNGDISSAFAYFCQ--------------MLKRGF--------------------- 327
           + GFC  G +  A+ ++                M+K  F                     
Sbjct: 341 VKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVAC 400

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +PD +T+ TL++ LC+ G  ++A   +     +G   D  SY ++I GLC  G +V A +
Sbjct: 401 IPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVK 460

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M +    P  HI+N +I G+ +    S+A  I   M   G S  V T+N LI    
Sbjct: 461 VYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLC 520

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +     +A S+ +EM+ +G  PD+ TY  LI    +   I  AL ++ ++L +G+  D++
Sbjct: 521 KAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVM 580

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQ 533
            +  LI G C+ G + EA  VF+ ++
Sbjct: 581 MHNILIHGLCSAGKVDEALHVFSDMK 606



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 209/423 (49%), Gaps = 6/423 (1%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P++ T+N ++  LC  GDL++A  +   +   + +P+  TY+  + G  + + LD AL 
Sbjct: 155 APNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALD 214

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L   M  + ++P+ V +N L+    K G     ++   +++ D    A  ++ T  +++D
Sbjct: 215 LLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDP--GARPNLATYNVMLD 272

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K G   +   +W  M   N+Q D++ Y +LI+G C +GD+  A   + +++K G + 
Sbjct: 273 GLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVI 332

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           D   YN+L+   C+ G++ EA  F+      G+  +  +Y  +I+GL   G + +A E L
Sbjct: 333 DAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIE-L 390

Query: 390 LSMLEKSV--VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
             +LEK V  +P+   +  +I G  + G  + AF+I +     G   +VF+++++I    
Sbjct: 391 WDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLC 450

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G + DA  + ++M  DG  P+   YN LI   C +     A+++Y +M   G +P +I
Sbjct: 451 NVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVI 510

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           TY  LI G C     +EA  V  ++   G   D   +  L +     K+ D A  I ++ 
Sbjct: 511 TYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI 570

Query: 568 LLR 570
           L +
Sbjct: 571 LYK 573



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 220/498 (44%), Gaps = 47/498 (9%)

Query: 92  LILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQ-KGTV 150
           L  ++ LD    + D  P R  ++ D   + A++      G+    + +  K+++  G  
Sbjct: 203 LAKQDRLDHALDLLDEMP-RSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGAR 261

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P++ T+N +++ LCK G  ++   V   M      P+  TY   I G CR  ++D A  +
Sbjct: 262 PNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARV 321

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKA-TSDVITSTILMD 269
           +S +   G+  +   +N LV   C+ G + +A KF      D  G A   ++ T  I++ 
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW-----DSAGFAGLRNLRTYNIMIK 376

Query: 270 SYFKNGDKFQALALWNDMFQKNIQ--TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
             F +G   +A+ LW D+ +K++    D V +  LI+G C NG  + AF  F +    G 
Sbjct: 377 GLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGK 435

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             DV +Y++++N LC  G+L +A   Y  + K G  P+   Y  +I G C       A  
Sbjct: 436 QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVR 495

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               M +    P    +N +IDG  +      A S+   M+  G + ++ T+ +LI    
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRR------- 500
               I DA S+ K++L  G+  DV  +N+LI   C+ G +  AL ++ +M  +       
Sbjct: 556 SDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615

Query: 501 -----------------------------GITPDIITYTELIKGHCARGNMKEAEEVFAK 531
                                        G+ PDII+Y   IKG C+   + E  ++  +
Sbjct: 616 VTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDE 675

Query: 532 IQTLGLAIDHIPFRILKK 549
           + + G+    I + IL +
Sbjct: 676 VLSRGIIPTVITWNILVR 693



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 104/460 (22%), Positives = 185/460 (40%), Gaps = 81/460 (17%)

Query: 102 KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           K ++D G  R  L T    +  ++  LC  G+      +  +M+     PDV+T+  L++
Sbjct: 253 KLVKDPG-ARPNLAT----YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIH 307

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIR- 220
            LC+ GD++ A  V  E+ +     + A YN+ + G+C+   + +A   + +    G+R 
Sbjct: 308 GLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRN 367

Query: 221 ----------------------------------PNRVTHNILVHALCKKGL-------- 238
                                             P+ VT   L+H LC+ G         
Sbjct: 368 LRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIF 427

Query: 239 ---------------------------LGDAVKFLGEVLADDDGKATSDVITSTILMDSY 271
                                      L DAVK   E +  D  K  S +  +  L+  +
Sbjct: 428 EEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVY-EKMDKDGCKPNSHIYNA--LISGF 484

Query: 272 FKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDV 331
            +      A+ +++ M        ++ YN LI+G C       A +   +M++ GF PD+
Sbjct: 485 CQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDI 544

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
            TY +L+  L    K+D+A   +  +   G+  D + +  +I GLC  G + +A      
Sbjct: 545 TTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSD 604

Query: 392 MLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
           M EK   P P++  +N ++DG    G +  A ++   +   G+  ++ ++N  I      
Sbjct: 605 MKEKKNCP-PNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSC 663

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
             I +   L  E+L  GI P V T+N+L+ A    G I +
Sbjct: 664 DRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQV 703



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 3/290 (1%)

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA + L  +L  + G  + + +    +    F + D F A +L +  F + I  ++  YN
Sbjct: 104 DAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFA-SLSHGAFGRRIAPNLQTYN 162

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           +++   C  GD+  A   F  + +R   PD ITY+TL+  L KQ +LD A      + ++
Sbjct: 163 IVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRS 222

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSML-EKSVVPEPHIWNVIIDGYGRCGDLSN 419
            V PD + Y  ++ G    G+  K       ++ +    P    +NV++DG  + G    
Sbjct: 223 RVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKE 282

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIG 479
              + + M++  +  +V T+  LI    R G +  A  +  E++  G+  D   YN L+ 
Sbjct: 283 VGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVK 342

Query: 480 ASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
             C  G +  A + +D     G+  ++ TY  +IKG    G + EA E++
Sbjct: 343 GFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELW 391


>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 217/446 (48%), Gaps = 11/446 (2%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
            +  D   +  VI  LC  G    A     +M++ G +PD +++N L++  CK+G+  +A
Sbjct: 158 VISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA 217

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
             ++ E+SE+    N  T+   ++ Y  ++ +++A   +  M  +G  P+ VT + +++ 
Sbjct: 218 KALVDEISEL----NLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINR 270

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
           LCK G + +    L E+   ++     + +T T L+DS FK      ALAL++ M  + I
Sbjct: 271 LCKGGKVLEGGLLLREM---EEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGI 327

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D+V Y VL++G    GD+  A   F  +L+   +P+V+TY  L++ LCK G L  A  
Sbjct: 328 PVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEF 387

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
               + +  V P+ ++Y ++I G    G + +A   L  M +++VVP    +  +IDG  
Sbjct: 388 IITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLF 447

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           + G    A  +   M   GV  N +  +AL+    R G I +   L K+M+  G+  D  
Sbjct: 448 KAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQI 507

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            Y  LI      G    AL   +EM  RG+  D+++Y  LI G    G +  A+  +  +
Sbjct: 508 NYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGM 566

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESD 558
           +  G+  D   F I+    R+  +S+
Sbjct: 567 REKGIEPDIATFNIMMNSQRKQGDSE 592



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 213/427 (49%), Gaps = 4/427 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++  LC  G + +A ++  +M++K  +P+V+T++ ++N   K G LE+A  ++R+M 
Sbjct: 369 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME 428

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  TY   I G  +  + + A+ L   M   G+  N    + LV+ L + G + 
Sbjct: 429 DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIK 488

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +    + ++++      T D I  T L+D +FK GD+  ALA   +M ++ +  D+V+YN
Sbjct: 489 EVKGLVKDMVSKG---VTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYN 545

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           VLI+G    G + + +AY   M ++G  PD+ T+N ++N   KQG  +     +  +   
Sbjct: 546 VLISGMLKFGKVGADWAY-KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSC 604

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P  +S   ++  LC +G + +A   L  M+   + P    + + +D   +       
Sbjct: 605 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAI 664

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           F   + +LS+G+  +   +N LI    + G    A  +  +M   G  PD  T+N L+  
Sbjct: 665 FKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHG 724

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
                H+  AL  Y  M+  GI+P++ TY  +I+G    G +KE ++  +++++ G+  D
Sbjct: 725 YFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPD 784

Query: 541 HIPFRIL 547
              +  L
Sbjct: 785 DFTYNAL 791



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 194/440 (44%), Gaps = 48/440 (10%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KMI  G  PDV   N L++  CK+G L  A  ++R       S +  TYN  I+G C   
Sbjct: 121 KMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHG 177

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
             D+A    S M   GI P+ V++N L+   CK G    A   + E+       +  ++I
Sbjct: 178 LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI-------SELNLI 230

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI---------- 312
           T TIL+ SY+      +A   + DM       D+V ++ +IN  C  G +          
Sbjct: 231 THTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREM 287

Query: 313 -------------------------SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
                                      A A + QM+ RG   D++ Y  L++ L K G L
Sbjct: 288 EEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDL 347

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            EA   + +L +    P+ ++Y  ++ GLC  GD+  A   +  MLEKSV+P    ++ +
Sbjct: 348 REAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSM 407

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I+GY + G L  A S+   M    V  N FT+  +I    + G    A  L KEM L G+
Sbjct: 408 INGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGV 467

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
             + +  + L+     +G I     L  +M+ +G+T D I YT LI      G+ + A  
Sbjct: 468 EENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALA 527

Query: 528 VFAKIQTLGLAIDHIPFRIL 547
              ++Q  G+  D + + +L
Sbjct: 528 WAEEMQERGMPWDVVSYNVL 547



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 170/354 (48%), Gaps = 4/354 (1%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           GG    AL    +M ++G   DV+++N L++ + K G +  AD   + M E    P+ AT
Sbjct: 519 GGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIAT 577

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           +N  +    +  + +  L L+  M + GI+P+ ++ NI+V  LC+ G + +A+  L +++
Sbjct: 578 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 637

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             +      ++ T  I +D+  K+            +    I+     YN LI   C  G
Sbjct: 638 LME---IHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLG 694

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
               A      M  RGF+PD +T+N+L++       + +A   Y V+ + G++P+  +Y 
Sbjct: 695 MTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYN 754

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           TII+GL   G I +  ++L  M  + + P+   +N +I G  + G++  + +I   M++ 
Sbjct: 755 TIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD 814

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           G+     T+N LI      G +  A  L KEM   G+ P+  TY  +I   C L
Sbjct: 815 GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 868



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 166/365 (45%), Gaps = 35/365 (9%)

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL-GEVLADDDGK 256
           Y     L  A    S M   G+ P+    N L+H     GL+ D V  +  +++A     
Sbjct: 70  YLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIA---CG 126

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
            + DV    +L+ S+ K G    A++L  +   + I  D V YN +I+G C +G    A+
Sbjct: 127 VSPDVFALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAY 183

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGK-------LDEASHF---------------- 353
            +  +M+K G LPD ++YNTL++  CK G        +DE S                  
Sbjct: 184 QFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLH 243

Query: 354 -----YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
                Y  +  +G  PD +++ +II  LC  G +++    L  M E SV P    +  ++
Sbjct: 244 AIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLV 303

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           D   +     +A ++   M+  G+  ++  +  L+    + G + +A    K +L D   
Sbjct: 304 DSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQV 363

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P+V TY  L+   C  G +  A  +  +ML + + P+++TY+ +I G+  +G ++EA  +
Sbjct: 364 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 423

Query: 529 FAKIQ 533
             K++
Sbjct: 424 LRKME 428



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 9/181 (4%)

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS-IRDLMLSFGVSSNVFTFNALI 443
           A   L +M    VVP+  +WN +I  +   G + +  S I   M++ GVS +VF  N LI
Sbjct: 79  AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 138

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            +  + G +  A SL +  +   I  D  TYN +I   C  G    A Q   EM++ GI 
Sbjct: 139 HSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGIL 195

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA-RD 562
           PD ++Y  LI G C  GN   A+ +  +I  L L    I   IL   Y  +   ++A RD
Sbjct: 196 PDTVSYNTLIDGFCKVGNFVRAKALVDEISELNL----ITHTILLSSYYNLHAIEEAYRD 251

Query: 563 I 563
           +
Sbjct: 252 M 252


>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
 gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 217/445 (48%), Gaps = 11/445 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   +  VI  LC  G    A     +M++ G +PD +++N L++  CK+G+  +A 
Sbjct: 157 ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAK 216

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ E+SE+    N  T+   ++ Y  ++ +++A   +  M  +G  P+ VT + +++ L
Sbjct: 217 ALVDEISEL----NLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRL 269

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK G + +    L E+   ++     + +T T L+DS FK      ALAL++ M  + I 
Sbjct: 270 CKGGKVLEGGLLLREM---EEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIP 326

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+V Y VL++G    GD+  A   F  +L+   +P+V+TY  L++ LCK G L  A   
Sbjct: 327 VDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFI 386

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + +  V P+ ++Y ++I G    G + +A   L  M +++VVP    +  +IDG  +
Sbjct: 387 ITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFK 446

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G    A  +   M   GV  N +  +AL+    R G I +   L K+M+  G+  D   
Sbjct: 447 AGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQIN 506

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQ 533
           Y  LI      G    AL   +EM  RG+  D+++Y  LI G    G +  A+  +  ++
Sbjct: 507 YTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMR 565

Query: 534 TLGLAIDHIPFRILKKRYRRMKESD 558
             G+  D   F I+    R+  +S+
Sbjct: 566 EKGIEPDIATFNIMMNSQRKQGDSE 590



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 213/427 (49%), Gaps = 4/427 (0%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A++  LC  G + +A ++  +M++K  +P+V+T++ ++N   K G LE+A  ++R+M 
Sbjct: 367 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME 426

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
           +    PN  TY   I G  +  + + A+ L   M   G+  N    + LV+ L + G + 
Sbjct: 427 DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIK 486

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +    + ++++      T D I  T L+D +FK GD+  ALA   +M ++ +  D+V+YN
Sbjct: 487 EVKGLVKDMVSKG---VTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYN 543

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           VLI+G    G + + +AY   M ++G  PD+ T+N ++N   KQG  +     +  +   
Sbjct: 544 VLISGMLKFGKVGADWAY-KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSC 602

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G+ P  +S   ++  LC +G + +A   L  M+   + P    + + +D   +       
Sbjct: 603 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAI 662

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           F   + +LS+G+  +   +N LI    + G    A  +  +M   G  PD  T+N L+  
Sbjct: 663 FKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHG 722

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
                H+  AL  Y  M+  GI+P++ TY  +I+G    G +KE ++  +++++ G+  D
Sbjct: 723 YFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPD 782

Query: 541 HIPFRIL 547
              +  L
Sbjct: 783 DFTYNAL 789



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 194/440 (44%), Gaps = 48/440 (10%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           KMI  G  PDV   N L++  CK+G L  A  ++R       S +  TYN  I+G C   
Sbjct: 119 KMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHG 175

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
             D+A    S M   GI P+ V++N L+   CK G    A   + E+       +  ++I
Sbjct: 176 LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI-------SELNLI 228

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI---------- 312
           T TIL+ SY+      +A   + DM       D+V ++ +IN  C  G +          
Sbjct: 229 THTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREM 285

Query: 313 -------------------------SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
                                      A A + QM+ RG   D++ Y  L++ L K G L
Sbjct: 286 EEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDL 345

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            EA   + +L +    P+ ++Y  ++ GLC  GD+  A   +  MLEKSV+P    ++ +
Sbjct: 346 REAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSM 405

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I+GY + G L  A S+   M    V  N FT+  +I    + G    A  L KEM L G+
Sbjct: 406 INGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGV 465

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
             + +  + L+     +G I     L  +M+ +G+T D I YT LI      G+ + A  
Sbjct: 466 EENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALA 525

Query: 528 VFAKIQTLGLAIDHIPFRIL 547
              ++Q  G+  D + + +L
Sbjct: 526 WAEEMQERGMPWDVVSYNVL 545



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 170/354 (48%), Gaps = 4/354 (1%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           GG    AL    +M ++G   DV+++N L++ + K G +  AD   + M E    P+ AT
Sbjct: 517 GGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIAT 575

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           +N  +    +  + +  L L+  M + GI+P+ ++ NI+V  LC+ G + +A+  L +++
Sbjct: 576 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
             +      ++ T  I +D+  K+            +    I+     YN LI   C  G
Sbjct: 636 LME---IHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLG 692

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
               A      M  RGF+PD +T+N+L++       + +A   Y V+ + G++P+  +Y 
Sbjct: 693 MTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYN 752

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
           TII+GL   G I +  ++L  M  + + P+   +N +I G  + G++  + +I   M++ 
Sbjct: 753 TIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD 812

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
           G+     T+N LI      G +  A  L KEM   G+ P+  TY  +I   C L
Sbjct: 813 GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 866



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 166/365 (45%), Gaps = 35/365 (9%)

Query: 198 YCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFL-GEVLADDDGK 256
           Y     L  A    S M   G+ P+    N L+H     GL+ D V  +  +++A     
Sbjct: 68  YLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIA---CG 124

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
            + DV    +L+ S+ K G    A++L  +   + I  D V YN +I+G C +G    A+
Sbjct: 125 VSPDVFALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAY 181

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGK-------LDEASHF---------------- 353
            +  +M+K G LPD ++YNTL++  CK G        +DE S                  
Sbjct: 182 QFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLH 241

Query: 354 -----YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
                Y  +  +G  PD +++ +II  LC  G +++    L  M E SV P    +  ++
Sbjct: 242 AIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLV 301

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           D   +     +A ++   M+  G+  ++  +  L+    + G + +A    K +L D   
Sbjct: 302 DSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQV 361

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P+V TY  L+   C  G +  A  +  +ML + + P+++TY+ +I G+  +G ++EA  +
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421

Query: 529 FAKIQ 533
             K++
Sbjct: 422 LRKME 426



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 9/181 (4%)

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS-IRDLMLSFGVSSNVFTFNALI 443
           A   L +M    VVP+  +WN +I  +   G + +  S I   M++ GVS +VF  N LI
Sbjct: 77  AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 136

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            +  + G +  A SL +  +   I  D  TYN +I   C  G    A Q   EM++ GI 
Sbjct: 137 HSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGIL 193

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA-RD 562
           PD ++Y  LI G C  GN   A+ +  +I  L L    I   IL   Y  +   ++A RD
Sbjct: 194 PDTVSYNTLIDGFCKVGNFVRAKALVDEISELNL----ITHTILLSSYYNLHAIEEAYRD 249

Query: 563 I 563
           +
Sbjct: 250 M 250


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 218/485 (44%), Gaps = 39/485 (8%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  +Y  + A+I   C  G I  A     +M +K  VP+V+T++ L+N   K G L  A 
Sbjct: 125 LVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAF 184

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            V+R+M      PN  TY   + G  +    D AL L+S M   G++ N    +  V+ +
Sbjct: 185 KVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNM 244

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            + G + +A + + ++ +   G    D++  T LMD + K+G    AL L  +M  KN+ 
Sbjct: 245 KRSGRMEEAEELVAKMAS---GGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 301

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            DIV +NVLIN     G  S   + +  M + G  PD+ TYNT+LN   K+G    A   
Sbjct: 302 FDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALEL 360

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP-------------- 399
           +  +    + P+ I+   +I GLC  G +  A + L  M+   + P              
Sbjct: 361 WNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSK 420

Query: 400 ---------------------EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
                                +  ++N++I    + G    A ++   M   G+ ++  T
Sbjct: 421 SRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTT 480

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +NALI        +  AF     ML + + PD+ TYNLL+G     G IH A  L  E+ 
Sbjct: 481 YNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIK 540

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
           +RG+ P+  TY  L+ GHC   N KE   ++ ++   G       + +L   + +M +  
Sbjct: 541 KRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMK 600

Query: 559 KARDI 563
           +A+++
Sbjct: 601 QAKEL 605



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 226/510 (44%), Gaps = 74/510 (14%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            GK+  AL     MI +G   DV+    L++ L K G +++A+++   + ++   PN  T
Sbjct: 72  AGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYIT 131

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           Y+A I G C++ +++ A      M      PN +T++ L++   K+GLL DA K L +++
Sbjct: 132 YSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMV 191

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ--------------------- 289
             +   A  ++ T  IL+D  FK G +  AL L++ M Q                     
Sbjct: 192 HKN---AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSG 248

Query: 290 --------------KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
                           ++ D+V Y  L++GF  +G +SSA     +M  +  + D++T+N
Sbjct: 249 RMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFN 308

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
            L+NCL K GK D  S  Y  + + G++PD  +Y T++ G    G+   A E    M  +
Sbjct: 309 VLINCLFKLGKSDTES-IYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSR 367

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT----------------- 438
            ++P     N++I+G    G + NA  I   M+  G+     T                 
Sbjct: 368 KLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTI 427

Query: 439 ------------------FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
                             +N LI    + G    A ++ K+M   GI  D  TYN LI  
Sbjct: 428 LQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHG 487

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C   H+  A   Y  ML   ++PDI TY  L+ G    G + EA+++ ++I+  GL  +
Sbjct: 488 YCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPN 547

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWLLR 570
              +  L   + +++ + +   I+ + +++
Sbjct: 548 ACTYETLMCGHCKVRNTKECLRIYCEMVIK 577



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 197/416 (47%), Gaps = 14/416 (3%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL L  KM Q G   +V   +  VN + + G +E+A+ ++ +M+     P+   Y   + 
Sbjct: 218 ALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMD 277

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG-----LLGDAVKFLGEVLA 251
           G+ +  ++  AL+L   M +  +  + VT N+L++ L K G      +  A++ +G    
Sbjct: 278 GFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESIYSAMREMG---- 333

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                 + D+ T   +++  FK G+   AL LWN+M  + +  + +  N++ING C  G 
Sbjct: 334 -----LSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGR 388

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKT 371
           + +A     +M+  G  P   TY  LLN   K  + D     + +L    +  D+  Y  
Sbjct: 389 MENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNI 448

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFG 431
           +I  LC  G   KA   L  M E+ ++ +   +N +I GY     L  AF     MLS  
Sbjct: 449 LISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSER 508

Query: 432 VSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
           VS ++ T+N L+   ++ G I +A  L  E+   G+ P+  TY  L+   C + +    L
Sbjct: 509 VSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECL 568

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           ++Y EM+ +G  P    Y  LI      G MK+A+E+  ++QT G++     + IL
Sbjct: 569 RIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDIL 624



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 207/434 (47%), Gaps = 14/434 (3%)

Query: 137 ALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           AL L  +M+  G  PDV+T   ++  LCK G L +   ++REM +M  + N  +Y   + 
Sbjct: 8   ALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLD 67

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
              +  ++ +AL   + M   G   + +   +L+  L K G + +A      +   +   
Sbjct: 68  ALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLN--- 124

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
              + IT + L+D   K GD   A +  ++M +K+   +++ Y+ LING+   G +  AF
Sbjct: 125 LVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAF 184

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M+ +  +P++ TY  LL+   K G  D A   Y  + + G+  +       +  +
Sbjct: 185 KVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNM 244

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
              G + +A E +  M    + P+   +  ++DG+ + G +S+A ++   M S  V  ++
Sbjct: 245 KRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDI 304

Query: 437 FTFNALI-----LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLAL 491
            TFN LI     L ++   SI+ A    +EM   G+ PD+ TYN ++  +   G+   AL
Sbjct: 305 VTFNVLINCLFKLGKSDTESIYSAM---REM---GLSPDLATYNTMLNGNFKKGNWTSAL 358

Query: 492 QLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           +L++EM  R + P+ IT   +I G C  G M+ A ++  ++  +GL      +RIL    
Sbjct: 359 ELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNIS 418

Query: 552 RRMKESDKARDIHQ 565
            + + +D     H+
Sbjct: 419 SKSRRADTILQTHE 432



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 172/362 (47%), Gaps = 33/362 (9%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  ++      GK+ +AL L ++M  K  V D++T N L+N L K+G     +
Sbjct: 265 LKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTE 323

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   M EM  SP+ ATYN  + G  +      AL L++ M +  + PN +T NI+++ L
Sbjct: 324 SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGL 383

Query: 234 CKKGLLGDAVKFLGE--------------VLADDDGKAT-SDVITST------------- 265
           C+ G + +A+  L E              +L +   K+  +D I  T             
Sbjct: 384 CEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDK 443

Query: 266 ----ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
               IL+ +  K G   +A A+  DM ++ I  D   YN LI+G+C++  +  AF  +  
Sbjct: 444 DVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYST 503

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           ML     PD+ TYN LL  L K G + EA      + K G+ P+  +Y+T++ G C   +
Sbjct: 504 MLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRN 563

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
             +       M+ K  +P+P  +N++I  + + G +  A  + + M + GVS    T++ 
Sbjct: 564 TKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDI 623

Query: 442 LI 443
           LI
Sbjct: 624 LI 625



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 169/341 (49%), Gaps = 8/341 (2%)

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
           N L++AL L+  M  +GI P+ VT   +++ LCK G L +     G++L  + GK   ++
Sbjct: 3   NGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSE-----GKLLLREMGKMGMNL 57

Query: 262 --ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
             ++ TIL+D+ FK G   +AL     M  +    D++A  VLI+G   +G I  A   F
Sbjct: 58  NNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLF 117

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
           C + +   +P+ ITY+ L++  CK G ++ A      + +    P+ I+Y ++I G    
Sbjct: 118 CNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQ 177

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           G +  A + L  M+ K+ +P    + +++DG  + G    A  +   M   G+  NVF  
Sbjct: 178 GLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFIL 237

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLR 499
           +A +    R G + +A  L  +M   G+ PD+  Y  L+      G +  AL L  EM  
Sbjct: 238 DAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTS 297

Query: 500 RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
           + +  DI+T+  LI      G   + E +++ ++ +GL+ D
Sbjct: 298 KNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPD 337



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 142/293 (48%)

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +AL L+ +M    I  D+V +  ++ G C +G +S       +M K G   + ++Y  LL
Sbjct: 7   EALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILL 66

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           + L K GK+ EA      +   G   D I+   +I GL   G I +A     ++ + ++V
Sbjct: 67  DALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLV 126

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P    ++ +IDG  + GD++ A S    M       NV T+++LI    + G + DAF +
Sbjct: 127 PNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKV 186

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            ++M+     P++ TY +L+  S   G   +AL LY +M + G+  ++      +     
Sbjct: 187 LRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKR 246

Query: 519 RGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
            G M+EAEE+ AK+ + GL  D + +  L   + +  +   A ++ Q+   +N
Sbjct: 247 SGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKN 299



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 92/189 (48%)

Query: 344 QGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI 403
           Q  L+EA   Y  +  +G+ PD +++ +I+ GLC HG + + +  L  M +  +      
Sbjct: 2   QNGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVS 61

Query: 404 WNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML 463
           + +++D   + G ++ A      M+  G + +V     LI    + G I +A  L   + 
Sbjct: 62  YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLY 121

Query: 464 LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
              + P+  TY+ LI   C LG I+ A     EM  +   P++ITY+ LI G+  +G + 
Sbjct: 122 QLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 181

Query: 524 EAEEVFAKI 532
           +A +V  K+
Sbjct: 182 DAFKVLRKM 190



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 15/232 (6%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDL 169
           V   L+ D   +  +I +LC  G    A  + + M ++G + D  T+N L++  C    L
Sbjct: 435 VNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHL 494

Query: 170 EKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNIL 229
           ++A      M   R SP+  TYN  + G  +   + +A  L S +   G+ PN  T+  L
Sbjct: 495 KRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETL 554

Query: 230 VHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQ 289
           +   CK     + ++   E++               +L+  + K G   QA  L N+M  
Sbjct: 555 MCGHCKVRNTKECLRIYCEMVIKG---FIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQT 611

Query: 290 KNIQTDIVAYNVLINGFC-------LNGDI-----SSAFAYFCQMLKRGFLP 329
           K +      Y++LI G+C       L   +     + A   F +M  RGF+P
Sbjct: 612 KGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVP 663



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 64/131 (48%)

Query: 417 LSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNL 476
           L  A ++ + M+  G+  +V TF +++    + G + +   L +EM   G+  +  +Y +
Sbjct: 5   LEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTI 64

Query: 477 LIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLG 536
           L+ A    G +  AL     M+ RG   D+I  T LI G    G +KEAE +F  +  L 
Sbjct: 65  LLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLN 124

Query: 537 LAIDHIPFRIL 547
           L  ++I +  L
Sbjct: 125 LVPNYITYSAL 135


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 190/382 (49%), Gaps = 4/382 (1%)

Query: 187 NCATYNAFITGYCRVNELDKALHLFSTMANNGI-RPNRVTHNILVHALCKKGLLGDAVKF 245
           N   +N  + G    N++  A+HLF  +    I  PN V +  +++ LCKKG    A   
Sbjct: 141 NQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDL 200

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L  +   + G    +    +I++D++ K+G    A +L N+M QK+I  DI  Y+ LI+ 
Sbjct: 201 LRLM---EQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDA 257

Query: 306 FCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPD 365
            C      +    F +M+     P+V T+N++++ LCK+GK+++A      + + GV PD
Sbjct: 258 LCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPD 317

Query: 366 QISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRD 425
            I+Y  II G  + G + +ARE   SM+ KS+ P    +N++I+GY R   +  A  +  
Sbjct: 318 VITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCR 377

Query: 426 LMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLG 485
            +   G+  ++ T N L+      G    A +   EML  G  PD++T+  L+G     G
Sbjct: 378 EISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNG 437

Query: 486 HIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFR 545
            +  A+  + ++ RR    +I  YT +I G C  G + +A   F K+  +GL  D I + 
Sbjct: 438 LVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYT 497

Query: 546 ILKKRYRRMKESDKARDIHQKW 567
            +   Y +    D+A+D+ +K 
Sbjct: 498 AMISGYCQEGLLDEAKDMLRKM 519



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 192/411 (46%), Gaps = 4/411 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
            ++R L    K+  A+ L +K++++    P+ + +  ++N LCK G  +KA  ++R M +
Sbjct: 147 TLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQ 206

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               PN   Y+  I  +C+   LD A  L + M    I P+  T++ L+ ALCK     +
Sbjct: 207 GSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWEN 266

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
                 E++  +      +V T   ++D   K G    A  +   M +K +  D++ YN+
Sbjct: 267 VRTLFLEMIHLN---IYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNM 323

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +I+G+ L G +  A   F  M+ +   P++I+YN L+N   +Q K+DEA      +S+ G
Sbjct: 324 IIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKG 383

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
           + P  ++   ++ GL   G    A+ F   ML    +P+ +    ++ GY + G +  A 
Sbjct: 384 LKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAM 443

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           S    +      +N+  + A+I    + G +  A +  +++ L G+ PDV TY  +I   
Sbjct: 444 SHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGY 503

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           C  G +  A  +  +M   G   D  TY  +++G      + E +    +I
Sbjct: 504 CQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEI 554



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 148/287 (51%), Gaps = 3/287 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           +VI  LC  GK+  A  + R MI+KG  PDV+T+N +++     G +++A  +   M   
Sbjct: 288 SVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINK 347

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN  +YN  I GY R  ++D+A+ +   ++  G++P+ VT N+L+H L + G    A
Sbjct: 348 SIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSA 407

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
             F  E+L+        D+ T   L+  YFKNG   +A++ ++ + ++   T+I  Y  +
Sbjct: 408 QNFFDEMLS---AGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAV 464

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+G C NG +  A A F ++   G  PDVITY  +++  C++G LDEA      +   G 
Sbjct: 465 IDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGC 524

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIID 409
             D  +Y  I++G      + + + FL  +  KS   E     +++D
Sbjct: 525 LADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 155/306 (50%), Gaps = 3/306 (0%)

Query: 113 TLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
           ++  D   +  +I  LC   +      L  +MI     P+V T N +++ LCK G +E A
Sbjct: 243 SIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDA 302

Query: 173 DHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHA 232
           + ++R M E    P+  TYN  I GY    ++D+A  +F +M N  I PN +++NIL++ 
Sbjct: 303 EEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILING 362

Query: 233 LCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI 292
             ++  + +A++   E+     G   S ++T  +L+   F+ G    A   +++M     
Sbjct: 363 YARQKKIDEAMQVCREI--SQKGLKPS-IVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
             D+  +  L+ G+  NG +  A ++F ++ +R    ++  Y  +++ LCK GKLD+A  
Sbjct: 420 IPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHA 479

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            +  L   G+ PD I+Y  +I G C  G + +A++ L  M +   + +   +NVI+ G+ 
Sbjct: 480 TFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFL 539

Query: 413 RCGDLS 418
           R   +S
Sbjct: 540 RSNKVS 545



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 178/384 (46%), Gaps = 21/384 (5%)

Query: 80  EGNPQAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALW 139
           +G+ Q  F+ L         RL     T P  C        +  VI   C  G +  A  
Sbjct: 191 KGHTQKAFDLL---------RLMEQGSTKPNTCI-------YSIVIDAFCKDGMLDGATS 234

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L  +M QK   PD+ T++ L++ LCK+   E    +  EM  +   PN  T+N+ I G C
Sbjct: 235 LLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLC 294

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +  +++ A  +   M   G+ P+ +T+N+++     +G +  A +    ++   +     
Sbjct: 295 KEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMI---NKSIEP 351

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           ++I+  IL++ Y +     +A+ +  ++ QK ++  IV  NVL++G    G   SA  +F
Sbjct: 352 NIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFF 411

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEA-SHFYGVLSKTGVAPDQISYKTIIQGLCI 378
            +ML  G +PD+ T+ TLL    K G ++EA SHF+ +  +      QI Y  +I GLC 
Sbjct: 412 DEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQI-YTAVIDGLCK 470

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
           +G + KA      +    + P+   +  +I GY + G L  A  +   M   G  ++  T
Sbjct: 471 NGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRT 530

Query: 439 FNALILAETRGGSIFDAFSLKKEM 462
           +N ++    R   + +  +  +E+
Sbjct: 531 YNVIVRGFLRSNKVSEMKAFLEEI 554



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 137/332 (41%), Gaps = 75/332 (22%)

Query: 312 ISSAFAYFCQMLKRGFLPDVITYNTLLNCL------------------------------ 341
           +  AF+ F QM++   LP V++++ LL  L                              
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 342 -----CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ---------------------- 374
                C   + D       +  K G+  +Q+ + T+++                      
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 375 --------------GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
                         GLC  G   KA + L  M + S  P   I++++ID + + G L  A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
            S+ + M    +  ++FT++ LI A  +     +  +L  EM+   I+P+V T+N +I  
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
            C  G +  A ++   M+ +G+ PD+ITY  +I G+  RG +  A E+F  +    +  +
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPN 352

Query: 541 HIPFRILKKRYRRMKESDKA----RDIHQKWL 568
            I + IL   Y R K+ D+A    R+I QK L
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGL 384



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 5/154 (3%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   H  ++      G +  A+    K+ ++    ++  +  +++ LCK G L+KA    
Sbjct: 422 DLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATF 481

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
            ++  +   P+  TY A I+GYC+   LD+A  +   M +NG   +  T+N++V    + 
Sbjct: 482 EKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRS 541

Query: 237 GLLGDAVKFLGEVLADDDGKATS-DVITSTILMD 269
             + +   FL E+     GK+ S +  T  +LMD
Sbjct: 542 NKVSEMKAFLEEIA----GKSFSFEAATVELLMD 571



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 57/116 (49%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           +T+ + + AVI  LC  GK+  A     K+   G  PDV+T+  +++  C+ G L++A  
Sbjct: 455 DTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKD 514

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
           ++R+M +     +  TYN  + G+ R N++ +       +A         T  +L+
Sbjct: 515 MLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLM 570


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 202/459 (44%), Gaps = 41/459 (8%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTV-PDVLTHNYLVNELCKIGDLEKADHVIREMSE 181
            ++   CL GK+  AL +  +M+ +  V PD +T+N ++  + K G L     ++ +M +
Sbjct: 209 VLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKK 268

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               PN  TYN  + GYC++  L +A  +   M    + P+  T+NIL++ LC  G + +
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMRE 328

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQT------- 294
            ++ +    A    K   DV+T   L+D  F+ G   +A  L   M    ++        
Sbjct: 329 GLELMD---AMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNI 385

Query: 295 -----------------------------DIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
                                        DIV Y+ LI  +   GD+S A     +M ++
Sbjct: 386 SLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G   + IT NT+L+ LCK+ KLDEA +      K G   D+++Y T+I G      + KA
Sbjct: 446 GIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKA 505

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
            E    M +  + P    +N +I G    G    A    D +   G+  +  TFN++IL 
Sbjct: 506 LEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILG 565

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
             + G +  AF    E +     PD +T N+L+   C  G    AL  ++ ++      D
Sbjct: 566 YCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-D 624

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
            +TY  +I   C    +KEA ++ ++++  GL  D   +
Sbjct: 625 TVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTY 663



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 188/403 (46%), Gaps = 3/403 (0%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G +  A  +   M Q   +PD+ T+N L+N LC  G + +   ++  M  ++  P+ 
Sbjct: 286 CKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDV 345

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN  I G   +    +A  L   M N+G++ N+VTHNI +  LCK+       + + E
Sbjct: 346 VTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKE 405

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
            L D  G  + D++T   L+ +Y K GD   AL +  +M QK I+ + +  N +++  C 
Sbjct: 406 -LVDMHG-FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK 463

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
              +  A        KRGF+ D +TY TL+    ++ K+++A   +  + K  + P   +
Sbjct: 464 ERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVST 523

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           + ++I GLC HG    A E    + E  ++P+   +N II GY + G +  AF   +  +
Sbjct: 524 FNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI 583

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
                 + +T N L+    + G    A +     L++    D  TYN +I A C    + 
Sbjct: 584 KHSFKPDNYTCNILLNGLCKEGMTEKALNFFN-TLIEEREVDTVTYNTMISAFCKDKKLK 642

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            A  L  EM  +G+ PD  TY   I      G + E +E+  K
Sbjct: 643 EAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 203/445 (45%), Gaps = 18/445 (4%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD---LEKADHVIREMSEMRPSPNC 188
           GK   AL + +KMI+    P++LT N L+  L +      +  A  V  +M ++  S N 
Sbjct: 145 GKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNV 204

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
            T+N  + GYC   +L+ AL +   M +   + P+ VT+N ++ A+ KKG L D    L 
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSD----LK 260

Query: 248 EVLAD-DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGF 306
           E+L D        + +T   L+  Y K G   +A  +   M Q N+  D+  YN+LING 
Sbjct: 261 ELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGL 320

Query: 307 CLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQ 366
           C  G +         M      PDV+TYNTL++   + G   EA      +   GV  +Q
Sbjct: 321 CNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQ 380

Query: 367 ISYKTIIQGLCIHGDIVKAREFLLSMLEKSV-----VPEPHIWNVIIDGYGRCGDLSNAF 421
           +++   ++ LC      + RE +   +++ V      P+   ++ +I  Y + GDLS A 
Sbjct: 381 VTHNISLKWLCKE----EKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGAL 436

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   M   G+  N  T N ++ A  +   + +A +L       G   D  TY  LI   
Sbjct: 437 EMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGF 496

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
                +  AL+++DEM +  ITP + T+  LI G C  G  + A E F ++   GL  D 
Sbjct: 497 FREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDD 556

Query: 542 IPFRILKKRYRRMKESDKARDIHQK 566
             F  +   Y +    +KA + + +
Sbjct: 557 STFNSIILGYCKEGRVEKAFEFYNE 581



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 177/393 (45%), Gaps = 20/393 (5%)

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
           + P P+ A ++  ++ Y    +   AL +F  M    ++PN +T N L+  L +      
Sbjct: 125 LSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYP-SSF 183

Query: 242 AVKFLGEVLADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAY 299
           ++    EV  D      S +V T  +L++ Y   G    AL +   M  +  +  D V Y
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
           N ++      G +S        M K G +P+ +TYN L+   CK G L EA     ++ +
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
           T V PD  +Y  +I GLC  G + +  E + +M    + P+   +N +IDG   C +L  
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG---CFELGL 360

Query: 420 AFSIRDLMLSF---GVSSNVFTFNA----LILAETRGGSIFDAFSLKKEMLLD--GIFPD 470
           +   R LM      GV +N  T N     L   E R     +A + K + L+D  G  PD
Sbjct: 361 SLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKR-----EAVTRKVKELVDMHGFSPD 415

Query: 471 VFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFA 530
           + TY+ LI A   +G +  AL++  EM ++GI  + IT   ++   C    + EA  +  
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475

Query: 531 KIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
                G  +D + +  L   + R ++ +KA ++
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEM 508



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 129/281 (45%), Gaps = 27/281 (9%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            ++  LC   K+  A  L     ++G + D +T+  L+    +   +EKA  +  EM ++
Sbjct: 456 TILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV 515

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           + +P  +T+N+ I G C   + + A+  F  +A +G+ P+  T N ++   CK+G +  A
Sbjct: 516 KITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA 575

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            +F  E +         D  T  IL++   K G   +AL  +N + ++  + D V YN +
Sbjct: 576 FEFYNESIKHS---FKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTM 631

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF-------YG 355
           I+ FC +  +  A+    +M ++G  PD  TYN+ ++ L + GKL E           +G
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFG 691

Query: 356 VL----------------SKTGVAPDQISYKTIIQGLCIHG 380
            +                SK  +  + I+Y  +I  LC  G
Sbjct: 692 SMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRG 732


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 181/387 (46%), Gaps = 38/387 (9%)

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           KG  P++LT+N ++  LCK+G +++A    REM     +P+  TY+  + G C+   +D+
Sbjct: 168 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 227

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A+ L   M   G  PN VT N+L+ AL K                               
Sbjct: 228 AVFLLDEMQAEGCLPNPVTFNVLIDALSK------------------------------- 256

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
                  NGD  +A  L ++MF K    + V YN LI+G CL G +  A +   +M+   
Sbjct: 257 -------NGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK 309

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            +P+ +TY T++N L KQ + ++  H    + + G   ++  Y ++I GL   G    A 
Sbjct: 310 CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 369

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
                M EK   P   ++   IDG  R      A  I   MLS G   N FT+++L+   
Sbjct: 370 RLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGF 429

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G    A  + KEM+   +  +V   ++L+   C  G +  AL ++  ML  G+ PD+
Sbjct: 430 FKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDV 489

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQ 533
           + Y+ +IKG C  G++ +  ++F ++Q
Sbjct: 490 VAYSSMIKGLCDVGSVDKGLKLFYEMQ 516



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 208/449 (46%), Gaps = 19/449 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC  G+I  A+   R+M  K   PDV T++ L+N LCK   +++A  ++ EM    
Sbjct: 180 IIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEG 239

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T+N  I    +  +L +A  L   M   G  PN VT+N L+H LC KG L  A+
Sbjct: 240 CLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 299

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++++    K   + +T   +++   K       + +   M ++  + +   Y+ LI
Sbjct: 300 SLLEKMVS---SKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLI 356

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G    G   +A   + +M ++G  P+V+ Y   ++ LC+  K DEA      +   G  
Sbjct: 357 SGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFL 416

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+  +Y ++++G    GD  KA      M+ + +       +V+++G    G L  A ++
Sbjct: 417 PNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTV 476

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD--GIFPDVFTYNLLIGAS 481
              ML  G+  +V  ++++I      GS+     L  EM        PDV TYN+L  A 
Sbjct: 477 WTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNAL 536

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C   ++  A+ L + ML  G  PD +T    ++    R N  +   +F         +D 
Sbjct: 537 CRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLF---------LDE 587

Query: 542 IPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +  R+L KR R++     A  I ++ LLR
Sbjct: 588 LVVRLL-KRERKL----SALRIVEEMLLR 611



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 201/447 (44%), Gaps = 56/447 (12%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++  LC   ++  A++L  +M  +G +P+ +T N L++ L K GDL +A  ++
Sbjct: 208 DVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLV 267

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M      PN  TYN  I G C   +LDKAL L   M ++   PN+VT+  +++ L K+
Sbjct: 268 DNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQ 327

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
               D V  L  +  ++ G+  ++ I S+ L+   FK G    A+ LW +M +K  + ++
Sbjct: 328 RRAEDGVHILMSM--EERGQKANEYIYSS-LISGLFKEGKSENAVRLWKEMAEKGCKPNV 384

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT-------------------- 336
           V Y   I+G C +     A     +ML +GFLP+  TY++                    
Sbjct: 385 VVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKE 444

Query: 337 ---------------LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
                          LLN LC+ G+L EA   +  +   G+ PD ++Y ++I+GLC  G 
Sbjct: 445 MMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGS 504

Query: 382 IVKAREFLLSM--LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           + K  +    M   E    P+   +N++ +   R  +L+ A  + + ML  G   +  T 
Sbjct: 505 VDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTC 564

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDG-IFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           N  I  ET    I            DG +F D     LL            AL++ +EML
Sbjct: 565 N--IFLETLRERINPP--------QDGRLFLDELVVRLL-----KRERKLSALRIVEEML 609

Query: 499 RRGITPDIITYTELIKGHCARGNMKEA 525
            R + P+  T++ +I+  C    ++E 
Sbjct: 610 LRFLPPEPSTWSRVIQRTCKPKRIRET 636



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 166/379 (43%), Gaps = 13/379 (3%)

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV---THNILVHALCKKG-LLGDAVK 244
           AT+   I  Y    E     H    + +   R  RV   T  IL+   C K  L G+AV 
Sbjct: 66  ATFYRLIENYATSREF----HFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVN 121

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF---QKNIQTDIVAYNV 301
           F   +  D   K T     S  +++   + GD   A   +  +F    K  Q +++ YN+
Sbjct: 122 FFHRMANDLHCKQTVKSFNS--VLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNL 179

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +I   C  G I  A   F +M  +   PDV TY+TL+N LCK+ ++DEA      +   G
Sbjct: 180 IIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEG 239

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             P+ +++  +I  L  +GD+ +A + + +M  K  VP    +N +I G    G L  A 
Sbjct: 240 CLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 299

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           S+ + M+S     N  T+  +I    +     D   +   M   G   + + Y+ LI   
Sbjct: 300 SLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGL 359

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
              G    A++L+ EM  +G  P+++ Y   I G C      EAE++  ++ + G   + 
Sbjct: 360 FKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNA 419

Query: 542 IPFRILKKRYRRMKESDKA 560
             +  L K + +  +S KA
Sbjct: 420 FTYSSLMKGFFKKGDSQKA 438


>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
          Length = 472

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 180/349 (51%), Gaps = 3/349 (0%)

Query: 194 FITGYCRVNELDKALH-LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
            + G+C     D+AL  L       G  P+  ++NIL+ +LC +G  G A   L  ++A+
Sbjct: 118 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLL-RMMAE 176

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                + DV+    ++D +FK GD  +A  L+ +M Q+ I  D+V YN +++  C    +
Sbjct: 177 GGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAM 236

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             A A+  QM+ +  LP+  TYN L+      G+  EA   +  + +  + PD ++   +
Sbjct: 237 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 296

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           +  LC +G I +AR+   +M  K   P+   +N++++GY   G L +   + DLML  G+
Sbjct: 297 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 356

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
           + + +TFN  I A    G +  A  +  EM   G+ PDV TY  +I A C +G +  A++
Sbjct: 357 APDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 416

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV-FAKIQTLGLAID 540
            +++M+ +G+ PD   Y  LI+G C  G + + + + F   + + L +D
Sbjct: 417 KFNQMIDQGVAPDKYAYNCLIQGFCTHGILLKTQGIDFGNNEIMALHLD 465



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 168/379 (44%), Gaps = 41/379 (10%)

Query: 110 VRCTLETDYRRHVAVIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           +R  L  D      +++  C   +   AL  L  +  + G VPDV ++N L+  LC  G 
Sbjct: 104 LRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGK 163

Query: 169 LEKADHVIREMSEMRP--SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTH 226
             +AD+++R M+E     SP+   YN  I G+ +  +++KA  LF  M   GI P+ VT+
Sbjct: 164 SGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY 223

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           N +VHALCK   +  A  FL +                                      
Sbjct: 224 NSVVHALCKARAMDKAEAFLRQ-------------------------------------- 245

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M  K +  +   YN LI G+   G    A   F +M +   LPDV+T + L+  LCK GK
Sbjct: 246 MVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK 305

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           + EA   +  ++  G  PD  SY  ++ G    G +V   +    ML   + P+ + +NV
Sbjct: 306 IKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNV 365

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
            I  Y  CG L  A  I + M   GV  +V T+  +I A  R G + DA     +M+  G
Sbjct: 366 QIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 425

Query: 467 IFPDVFTYNLLIGASCNLG 485
           + PD + YN LI   C  G
Sbjct: 426 VAPDKYAYNCLIQGFCTHG 444



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 175/365 (47%), Gaps = 4/365 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           SP   TY   +    R +  + AL  F  +   G+R + +  + L+   C+     +A+ 
Sbjct: 74  SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 133

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNI--QTDIVAYNVL 302
            L  +    +     DV +  IL+ S    G   QA  L   M +       D+VAYN +
Sbjct: 134 IL--LHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTV 191

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GF   GD++ A   F +M++RG  PD++TYN++++ LCK   +D+A  F   +    V
Sbjct: 192 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 251

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+  +Y  +I G    G   +A      M   S++P+    ++++    + G +  A  
Sbjct: 252 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 311

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M   G + +VF++N ++      G + D   L   ML DGI PD +T+N+ I A  
Sbjct: 312 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYA 371

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           N G +  A+ +++EM   G+ PD++TY  +I   C  G M +A E F ++   G+A D  
Sbjct: 372 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 431

Query: 543 PFRIL 547
            +  L
Sbjct: 432 AYNCL 436



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 144/288 (50%), Gaps = 5/288 (1%)

Query: 99  DRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNY 158
           D L  M   G   C+   D   +  VI      G +  A  L ++M+Q+G  PD++T+N 
Sbjct: 168 DNLLRMMAEGGTVCS--PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNS 225

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           +V+ LCK   ++KA+  +R+M   R  PN  TYN  I GY    +  +A+ +F  M  + 
Sbjct: 226 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 285

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
           I P+ VT ++L+ +LCK G + +A      +          DV +  I+++ Y   G   
Sbjct: 286 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ---NPDVFSYNIMLNGYATKGCLV 342

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
               L++ M    I  D   +NV I  +   G +  A   F +M   G  PDV+TY T++
Sbjct: 343 DMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 402

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
             LC+ GK+D+A   +  +   GVAPD+ +Y  +IQG C HG ++K +
Sbjct: 403 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLKTQ 450



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 169/364 (46%), Gaps = 11/364 (3%)

Query: 207 ALHLFSTMANNG-----IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
           A+ LF+  A+       + P   T+ IL+    +      A+ F G++L         D 
Sbjct: 56  AVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTG---LRVDA 112

Query: 262 ITSTILMDSYFKNGDKFQAL-ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFC 320
           I ++ L+  + +     +AL  L +   +     D+ +YN+L+   C  G    A     
Sbjct: 113 IIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLR 172

Query: 321 QMLKRGFL--PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
            M + G +  PDV+ YNT+++   K+G +++A   +  + + G+ PD ++Y +++  LC 
Sbjct: 173 MMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK 232

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
              + KA  FL  M+ K V+P    +N +I GY   G    A  +   M    +  +V T
Sbjct: 233 ARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVT 292

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
            + L+ +  + G I +A  +   M + G  PDVF+YN+++      G +     L+D ML
Sbjct: 293 LSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML 352

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
             GI PD  T+   IK +   G + +A  +F +++  G+  D + +R +     R+ + D
Sbjct: 353 GDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 412

Query: 559 KARD 562
            A +
Sbjct: 413 DAME 416



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 42/263 (15%)

Query: 315 AFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT---GVAPDQISYKT 371
           A A+F Q+L+ G   D I  + LL   C+  + DEA     +L +T   G  PD  SY  
Sbjct: 96  ALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI--LLHRTPELGCVPDVFSYNI 153

Query: 372 IIQGLCIHGDIVKAREFLLSMLEKSVVPEPHI--WNVIIDGYGRCGDLSNAFSIRDLMLS 429
           +++ LC  G   +A   L  M E   V  P +  +N +IDG+ + GD++           
Sbjct: 154 LLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNK---------- 203

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
                                    A  L KEM+  GI PD+ TYN ++ A C    +  
Sbjct: 204 -------------------------ACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDK 238

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           A     +M+ + + P+  TY  LI G+ + G  KEA  VF +++   +  D +   +L  
Sbjct: 239 AEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMG 298

Query: 550 RYRRMKESDKARDIHQKWLLRNK 572
              +  +  +ARD+     ++ +
Sbjct: 299 SLCKYGKIKEARDVFDTMAMKGQ 321


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 181/387 (46%), Gaps = 38/387 (9%)

Query: 147 KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDK 206
           KG  P++LT+N ++  LCK+G +++A    REM     +P+  TY+  + G C+   +D+
Sbjct: 192 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 251

Query: 207 ALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTI 266
           A+ L   M   G  PN VT N+L+ AL K                               
Sbjct: 252 AVFLLDEMQAEGCLPNPVTFNVLIDALSK------------------------------- 280

Query: 267 LMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRG 326
                  NGD  +A  L ++MF K    + V YN LI+G CL G +  A +   +M+   
Sbjct: 281 -------NGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK 333

Query: 327 FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAR 386
            +P+ +TY T++N L KQ + ++  H    + + G   ++  Y ++I GL   G    A 
Sbjct: 334 CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 393

Query: 387 EFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAE 446
                M EK   P   ++   IDG  R      A  I   MLS G   N FT+++L+   
Sbjct: 394 RLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGF 453

Query: 447 TRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            + G    A  + KEM+   +  +V   ++L+   C  G +  AL ++  ML  G+ PD+
Sbjct: 454 FKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDV 513

Query: 507 ITYTELIKGHCARGNMKEAEEVFAKIQ 533
           + Y+ +IKG C  G++ +  ++F ++Q
Sbjct: 514 VAYSSMIKGLCDVGSVDKGLKLFYEMQ 540



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 208/449 (46%), Gaps = 19/449 (4%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+ LC  G+I  A+   R+M  K   PDV T++ L+N LCK   +++A  ++ EM    
Sbjct: 204 IIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEG 263

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  T+N  I    +  +L +A  L   M   G  PN VT+N L+H LC KG L  A+
Sbjct: 264 CLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 323

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L ++++    K   + +T   +++   K       + +   M ++  + +   Y+ LI
Sbjct: 324 SLLEKMVS---SKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLI 380

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G    G   +A   + +M ++G  P+V+ Y   ++ LC+  K DEA      +   G  
Sbjct: 381 SGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFL 440

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+  +Y ++++G    GD  KA      M+ + +       +V+++G    G L  A ++
Sbjct: 441 PNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTV 500

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLD--GIFPDVFTYNLLIGAS 481
              ML  G+  +V  ++++I      GS+     L  EM        PDV TYN+L  A 
Sbjct: 501 WTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNAL 560

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C   ++  A+ L + ML  G  PD +T    ++    R N  +   +F         +D 
Sbjct: 561 CRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLF---------LDE 611

Query: 542 IPFRILKKRYRRMKESDKARDIHQKWLLR 570
           +  R+L KR R++     A  I ++ LLR
Sbjct: 612 LVVRLL-KRERKL----SALRIVEEMLLR 635



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 201/447 (44%), Gaps = 56/447 (12%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++  LC   ++  A++L  +M  +G +P+ +T N L++ L K GDL +A  ++
Sbjct: 232 DVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLV 291

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M      PN  TYN  I G C   +LDKAL L   M ++   PN+VT+  +++ L K+
Sbjct: 292 DNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQ 351

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
               D V  L  +  ++ G+  ++ I S+ L+   FK G    A+ LW +M +K  + ++
Sbjct: 352 RRAEDGVHILMSM--EERGQKANEYIYSS-LISGLFKEGKSENAVRLWKEMAEKGCKPNV 408

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT-------------------- 336
           V Y   I+G C +     A     +ML +GFLP+  TY++                    
Sbjct: 409 VVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKE 468

Query: 337 ---------------LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
                          LLN LC+ G+L EA   +  +   G+ PD ++Y ++I+GLC  G 
Sbjct: 469 MMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGS 528

Query: 382 IVKAREFLLSM--LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
           + K  +    M   E    P+   +N++ +   R  +L+ A  + + ML  G   +  T 
Sbjct: 529 VDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTC 588

Query: 440 NALILAETRGGSIFDAFSLKKEMLLDG-IFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           N  I  ET    I            DG +F D     LL            AL++ +EML
Sbjct: 589 N--IFLETLRERINPP--------QDGRLFLDELVVRLL-----KRERKLSALRIVEEML 633

Query: 499 RRGITPDIITYTELIKGHCARGNMKEA 525
            R + P+  T++ +I+  C    ++E 
Sbjct: 634 LRFLPPEPSTWSRVIQRTCKPKRIRET 660



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 166/379 (43%), Gaps = 13/379 (3%)

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV---THNILVHALCKKG-LLGDAVK 244
           AT+   I  Y    E     H    + +   R  RV   T  IL+   C K  L G+AV 
Sbjct: 90  ATFYRLIENYATSREF----HFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVN 145

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF---QKNIQTDIVAYNV 301
           F   +  D   K T     S  +++   + GD   A   +  +F    K  Q +++ YN+
Sbjct: 146 FFHRMANDLHCKQTVKSFNS--VLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNL 203

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +I   C  G I  A   F +M  +   PDV TY+TL+N LCK+ ++DEA      +   G
Sbjct: 204 IIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEG 263

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             P+ +++  +I  L  +GD+ +A + + +M  K  VP    +N +I G    G L  A 
Sbjct: 264 CLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 323

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
           S+ + M+S     N  T+  +I    +     D   +   M   G   + + Y+ LI   
Sbjct: 324 SLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGL 383

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
              G    A++L+ EM  +G  P+++ Y   I G C      EAE++  ++ + G   + 
Sbjct: 384 FKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNA 443

Query: 542 IPFRILKKRYRRMKESDKA 560
             +  L K + +  +S KA
Sbjct: 444 FTYSSLMKGFFKKGDSQKA 462


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 205/427 (48%), Gaps = 9/427 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC   K+     L      KG +P+++ +N LV+   K GD+E+A+ + +E+    
Sbjct: 211 MVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKG 270

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL---LG 240
             P   TY   I G C+         L   M   G+  N   +N +V A  K G    +G
Sbjct: 271 FLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVG 330

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
             ++++ E           D+ T   L+    ++G   +A  L     ++ +  + ++Y 
Sbjct: 331 KTLRWITE------NGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYT 384

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LI+ +C  G    AF  F  M ++G   D++ Y  L++ L   G++D A      + + 
Sbjct: 385 PLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVER 444

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           GV PD   Y  ++ GLC  G +  A+  L+ ML +++  +  +   ++DG+ R G L  A
Sbjct: 445 GVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEA 504

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + +L ++ G+   V  +NA+I    + G + DA +  + M      PD FTY+ +I  
Sbjct: 505 KKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDG 564

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
                 +H AL+L+ +M+++   P+++TYT LI G C  G+   AE+ F ++++ GL  +
Sbjct: 565 YVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPN 624

Query: 541 HIPFRIL 547
            + + IL
Sbjct: 625 VVTYTIL 631



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 200/437 (45%), Gaps = 19/437 (4%)

Query: 102 KTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN 161
           KT+R      C  E D   +  +I   C  GK+  A  L    I++G  P+ L++  L++
Sbjct: 331 KTLRWITENGC--EPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIH 388

Query: 162 ELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRP 221
             CK G   +A  +   M+E     +   Y A + G     E+D AL +   M   G+ P
Sbjct: 389 VYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLP 448

Query: 222 NRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQAL 281
           +   +N+L++ LCKKG L  A   L E+L  +    + D   S  L+D + ++G   +A 
Sbjct: 449 DANVYNVLMNGLCKKGRLSAAKLLLVEMLHQN---LSLDAFVSATLVDGFIRHGKLDEAK 505

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
            L+     K +   +V YN +I G+C  G ++ A     +M      PD  TY+T+++  
Sbjct: 506 KLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGY 565

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
            KQ  L  A   +G + K    P+ ++Y ++I G C  GD  +A +    M    + P  
Sbjct: 566 VKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNV 625

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI------LAETRGGSIFDA 455
             + ++I  + + G +S A S  +LML      N  TFN LI      LA        ++
Sbjct: 626 VTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANES 685

Query: 456 FSLK--------KEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             +K        + M+ DG    V  YN ++   C+   ++ ALQL D+M  +GI PD +
Sbjct: 686 LEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPV 745

Query: 508 TYTELIKGHCARGNMKE 524
           ++  L+ G C  G  KE
Sbjct: 746 SFAALVYGLCLEGRSKE 762



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 184/407 (45%), Gaps = 24/407 (5%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A++  L   G++  AL +R KM+++G +PD   +N L+N LCK G L  A  ++ EM   
Sbjct: 420 ALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQ 479

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             S +       + G+ R  +LD+A  LF      G+ P  V +N ++   CK G++ DA
Sbjct: 480 NLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDA 539

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  +  +    DG  + D  T + ++D Y K  D   AL L+  M ++  + ++V Y  L
Sbjct: 540 LTCVQRM---KDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSL 596

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           INGFC  GD S A   F +M   G  P+V+TY  L+ C CK+GK+ +A  F+ ++     
Sbjct: 597 INGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRC 656

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+ +++  +I GL  +         L + +         I   ++  + R         
Sbjct: 657 IPNDVTFNYLINGLTNN---------LATAVSNKANESLEIKASLMMDFFRT-------- 699

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
               M+S G    V  +N++++       +  A  L+ +M   GIFPD  ++  L+   C
Sbjct: 700 ----MISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLC 755

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
             G            L        + Y++ +     +G   EA +VF
Sbjct: 756 LEGRSKEWKNTISCKLNEWELQIAVKYSQKLNPFLPKGLTSEASKVF 802



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 174/373 (46%), Gaps = 3/373 (0%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M ++G   +V  +N +V+   K G   +    +R ++E    P+  TYN  I+G CR  
Sbjct: 300 EMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDG 359

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           ++ +A  L       G+ PN++++  L+H  CK+G     ++     +   +     D++
Sbjct: 360 KVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQG---KCLRAFDLFIGMTEKGHPLDLV 416

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
               L+      G+   AL + + M ++ +  D   YNVL+NG C  G +S+A     +M
Sbjct: 417 AYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEM 476

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L +    D     TL++   + GKLDEA   + +    G+ P  + Y  +I+G C  G +
Sbjct: 477 LHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMM 536

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A   +  M +    P+   ++ IIDGY +  DL NA  +   M+      NV T+ +L
Sbjct: 537 NDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSL 596

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    R G    A    +EM   G+ P+V TY +LIG  C  G I  A   ++ ML    
Sbjct: 597 INGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRC 656

Query: 503 TPDIITYTELIKG 515
            P+ +T+  LI G
Sbjct: 657 IPNDVTFNYLING 669



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 142/307 (46%), Gaps = 1/307 (0%)

Query: 265 TILMDSYFKNGDKFQALALWNDMFQ-KNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
           + ++ +Y  +G   +AL L++  +   N   D++A N L+N       +  A   + +M+
Sbjct: 138 SFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMV 197

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           KR    D  +   ++  LCK+ K++E           G  P+ + Y T++ G    GD+ 
Sbjct: 198 KRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVE 257

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A      +  K  +P    + ++I+G  +  +      +   M   GV  NV  +N+++
Sbjct: 258 RANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIV 317

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
            A+ + G   +     + +  +G  PD+ TYN LI  SC  G +H A +L +  ++RG++
Sbjct: 318 DAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLS 377

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P+ ++YT LI  +C +G    A ++F  +   G  +D + +  L        E D A  +
Sbjct: 378 PNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTV 437

Query: 564 HQKWLLR 570
             K + R
Sbjct: 438 RDKMVER 444


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 190/388 (48%), Gaps = 8/388 (2%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+V+T++  ++  CK G+L+ A      M      PN  T+   I GYC+  +L+  + L
Sbjct: 161 PNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSL 220

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
           +  M    +  N VT+  L+   CKKG +  A      +L D   +   + +  T +++ 
Sbjct: 221 YEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLED---RVEPNSLVYTTIING 277

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           +F+ GD   A+     M  + ++ DI AY V+I+G C  G +  A      M K   +PD
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPD 337

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           ++ + T++N   K G++  A + Y  L + G  PD ++  T+I G+  +G + +A  +  
Sbjct: 338 MMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFC 397

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
           +     V     ++ V+ID   +  D      +   +   G+  + F + + I    + G
Sbjct: 398 TEKANDV-----MYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQG 452

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           ++ DAF LK +M+ +G+  D+F Y  LI    + G +  A Q++DEMLR G+ PD   + 
Sbjct: 453 NLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFD 512

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLA 538
            LI+ +   GNM  A ++   +QT GLA
Sbjct: 513 LLIRAYEKEGNMTTASDLLLDMQTRGLA 540



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 219/474 (46%), Gaps = 37/474 (7%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE- 181
           +V+  +C  G++  A+ +   M + G  PDV+++N L++  C+ GD+  A  V+  +   
Sbjct: 61  SVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRAS 120

Query: 182 --MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLL 239
                 P+  ++N    G+ ++  LD+       M      PN VT++  +   CK G L
Sbjct: 121 YGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDMFCKSGEL 179

Query: 240 GDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAY 299
             A+K    +  D       +V+T T L+D Y K GD    ++L+ +M +  +  ++V Y
Sbjct: 180 KLALKSFNCMKRD---ALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTY 236

Query: 300 NVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK 359
             LI+GFC  G++  A   + +ML+    P+ + Y T++N   ++G  D A  F   +  
Sbjct: 237 TALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLN 296

Query: 360 TGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSN 419
            G+  D  +Y  II GLC  G + +A E +  M +  +VP+  I+  +++ Y + G +  
Sbjct: 297 QGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKA 356

Query: 420 AFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL-------------------KK 460
           A ++   ++  G   +V   + +I    + G + +A S                    K+
Sbjct: 357 AVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKANDVMYTVLIDALCKE 416

Query: 461 EMLLD-----------GIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
           E  ++           G+ PD F Y   I   C  G++  A +L  +M++ G+  D+  Y
Sbjct: 417 EDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAY 476

Query: 510 TELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           T LI G  ++G M EA +VF ++   G+  D   F +L + Y +      A D+
Sbjct: 477 TTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDL 530



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 189/376 (50%), Gaps = 8/376 (2%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
            C  G++  AL     M +    P+V+T   L++  CK GDLE    +  EM  +R S N
Sbjct: 173 FCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLN 232

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY A I G+C+  E+ +A  ++  M  + + PN + +  +++   ++G   +A+KFL 
Sbjct: 233 VVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLA 292

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           ++L   +     D+    +++      G   +A  +  DM + ++  D++ +  ++N + 
Sbjct: 293 KML---NQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYF 349

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            +G + +A   + ++++RGF PDV+  +T+++ + K G+L EA  ++     T  A D +
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFC----TEKAND-V 404

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
            Y  +I  LC   D ++       + E  +VP+  ++   I G  + G+L +AF ++  M
Sbjct: 405 MYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKM 464

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +  G+  ++F +  LI   T  G + +A  +  EML  G+ PD   ++LLI A    G++
Sbjct: 465 VQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNM 524

Query: 488 HLALQLYDEMLRRGIT 503
             A  L  +M  RG+ 
Sbjct: 525 TTASDLLLDMQTRGLA 540



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 169/344 (49%), Gaps = 8/344 (2%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C  G +   + L  +M +     +V+T+  L++  CK G++++A  +   M E R
Sbjct: 204 LIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDR 263

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN   Y   I G+ +  + D A+   + M N G+R +   + +++  LC  G L +A 
Sbjct: 264 VEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEAT 323

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + + ++   + G    D++  T +M++YFK+G    A+ +++ + ++  + D+VA + +I
Sbjct: 324 EIVEDM---EKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G   NG +  A +YFC           + Y  L++ LCK+    E    +  +S+ G+ 
Sbjct: 381 DGIAKNGQLHEAISYFCTEKAND-----VMYTVLIDALCKEEDFIEVERLFSKISEAGLV 435

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD+  Y + I GLC  G++V A +    M+++ +  +   +  +I G    G +  A  +
Sbjct: 436 PDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQV 495

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
            D ML  GV  +   F+ LI A  + G++  A  L  +M   G+
Sbjct: 496 FDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLDMQTRGL 539



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/444 (22%), Positives = 196/444 (44%), Gaps = 55/444 (12%)

Query: 93  ILKENLDRLKTMRDTG----PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKG 148
           ++KE L  L  +R +     PV C       +H+  + +   G     +L     ++ +G
Sbjct: 1   MVKEALQFLSRLRKSSNLPDPVTCN------KHIHQLINSNCGA---LSLKFLAYLVSRG 51

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKA- 207
             P   + N +V+ +CK+G ++ A  ++  M      P+  +YN+ I G+CR  ++  A 
Sbjct: 52  YAPHRSSFNSVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAC 111

Query: 208 LHLFSTMANNGI--RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           L L S  A+ G   +P+ V+ N L +   K  +L +   ++G +L               
Sbjct: 112 LVLESLRASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVML--------------- 156

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
                                   K    ++V Y+  I+ FC +G++  A   F  M + 
Sbjct: 157 ------------------------KCCSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRD 192

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
              P+V+T+  L++  CK G L+     Y  + +  ++ + ++Y  +I G C  G++ +A
Sbjct: 193 ALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRA 252

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
               L MLE  V P   ++  II+G+ + GD  NA      ML+ G+  ++  +  +I  
Sbjct: 253 GGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISG 312

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
               G + +A  + ++M    + PD+  +  ++ A    G +  A+ +Y +++ RG  PD
Sbjct: 313 LCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPD 372

Query: 506 IITYTELIKGHCARGNMKEAEEVF 529
           ++  + +I G    G + EA   F
Sbjct: 373 VVALSTMIDGIAKNGQLHEAISYF 396



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 176/376 (46%), Gaps = 19/376 (5%)

Query: 204 LDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG--KATSDV 261
           + +AL   S +  +   P+ VT N  +H L        ++KFL  +++      +++ + 
Sbjct: 2   VKEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNS 61

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           + S +      K G    A+ + + M +   + D+++YN LI+G C NGDI SA    C 
Sbjct: 62  VVSFVC-----KLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA----CL 112

Query: 322 MLKR-----GFL--PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQ 374
           +L+      GF   PD++++NTL N   K   LDE   + GV+ K   +P+ ++Y T I 
Sbjct: 113 VLESLRASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWID 171

Query: 375 GLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSS 434
             C  G++  A +    M   ++ P    +  +IDGY + GDL    S+ + M    +S 
Sbjct: 172 MFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSL 231

Query: 435 NVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLY 494
           NV T+ ALI    + G +  A  +   ML D + P+   Y  +I      G    A++  
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFL 291

Query: 495 DEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRM 554
            +ML +G+  DI  Y  +I G C  G +KEA E+   ++   L  D + F  +   Y + 
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKS 351

Query: 555 KESDKARDIHQKWLLR 570
                A +++ K + R
Sbjct: 352 GRMKAAVNMYHKLIER 367



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/381 (23%), Positives = 171/381 (44%), Gaps = 12/381 (3%)

Query: 174 HVIREMSEMRPS---PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
             ++ +S +R S   P+  T N  I      N    +L   + + + G  P+R + N +V
Sbjct: 4   EALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNSVV 63

Query: 231 HALCKKGLLGDAVKFLGEVL-ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM-- 287
             +CK G     VKF  +++ +        DVI+   L+D + +NGD   A  +   +  
Sbjct: 64  SFVCKLG----QVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRA 119

Query: 288 -FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
            +    + DIV++N L NGF     +   F Y   MLK    P+V+TY+T ++  CK G+
Sbjct: 120 SYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDMFCKSGE 178

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           L  A   +  + +  + P+ +++  +I G C  GD+         M    +      +  
Sbjct: 179 LKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTA 238

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +IDG+ + G++  A  +   ML   V  N   +  +I    + G   +A     +ML  G
Sbjct: 239 LIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQG 298

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           +  D+  Y ++I   C +G +  A ++ ++M +  + PD++ +T ++  +   G MK A 
Sbjct: 299 MRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAV 358

Query: 527 EVFAKIQTLGLAIDHIPFRIL 547
            ++ K+   G   D +    +
Sbjct: 359 NMYHKLIERGFEPDVVALSTM 379



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 147/318 (46%), Gaps = 11/318 (3%)

Query: 111 RCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLE 170
           R  +  +   + A+I   C  G++  A  +  +M++    P+ L +  ++N   + GD +
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSD 285

Query: 171 KADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILV 230
            A   + +M       +   Y   I+G C + +L +A  +   M    + P+ +    ++
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMM 345

Query: 231 HALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK 290
           +A  K G +  AV    +++   +     DV+  + ++D   KNG   +A++ +      
Sbjct: 346 NAYFKSGRMKAAVNMYHKLI---ERGFEPDVVALSTMIDGIAKNGQLHEAISYFC----- 397

Query: 291 NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEA 350
             + + V Y VLI+  C   D       F ++ + G +PD   Y + +  LCKQG L +A
Sbjct: 398 TEKANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA 457

Query: 351 SHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG 410
                 + + G+  D  +Y T+I GL   G +V+AR+    ML   V P+  +++++I  
Sbjct: 458 FKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRA 517

Query: 411 YGRCGDLSNAFSIRDLML 428
           Y + G+++ A    DL+L
Sbjct: 518 YEKEGNMTTA---SDLLL 532



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/279 (21%), Positives = 127/279 (45%), Gaps = 8/279 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +E +   +  +I      G    A+    KM+ +G   D+  +  +++ LC IG L++A 
Sbjct: 264 VEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEAT 323

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ +M +    P+   +   +  Y +   +  A++++  +   G  P+ V  + ++  +
Sbjct: 324 EIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGI 383

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            K G L +A+ +     A+D        +  T+L+D+  K  D  +   L++ + +  + 
Sbjct: 384 AKNGQLHEAISYFCTEKAND--------VMYTVLIDALCKEEDFIEVERLFSKISEAGLV 435

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D   Y   I G C  G++  AF    +M++ G   D+  Y TL+  L  +G + EA   
Sbjct: 436 PDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQV 495

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
           +  + ++GV PD   +  +I+     G++  A + LL M
Sbjct: 496 FDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLDM 534



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 8/250 (3%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           +  D   +  +I  LC  GK+  A  +   M +   VPD++    ++N   K G ++ A 
Sbjct: 299 MRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAV 358

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
           ++  ++ E    P+    +  I G  +  +L +A+  F T      + N V + +L+ AL
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTE-----KANDVMYTVLIDAL 413

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+    +  +   ++    +     D    T  +    K G+   A  L   M Q+ ++
Sbjct: 414 CKEEDFIEVERLFSKI---SEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLE 470

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+ AY  LI G    G +  A   F +ML+ G  PD   ++ L+    K+G +  AS  
Sbjct: 471 LDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDL 530

Query: 354 YGVLSKTGVA 363
              +   G+A
Sbjct: 531 LLDMQTRGLA 540



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 62/149 (41%)

Query: 112 CTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEK 171
           CT + +   +  +I  LC          L  K+ + G VPD   +   +  LCK G+L  
Sbjct: 397 CTEKANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456

Query: 172 ADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVH 231
           A  +  +M +     +   Y   I G      + +A  +F  M  +G+ P+    ++L+ 
Sbjct: 457 AFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIR 516

Query: 232 ALCKKGLLGDAVKFLGEVLADDDGKATSD 260
           A  K+G +  A   L ++      +A SD
Sbjct: 517 AYEKEGNMTTASDLLLDMQTRGLARAVSD 545


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 210/446 (47%), Gaps = 39/446 (8%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++R LC+ G +  A+ L   +  +G  PD +T++ L++   K   L+ A +++ EM    
Sbjct: 165 MLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYE 224

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDA 242
             P+   YNA + G  R  E +KA+ ++  +  + G  PN  T+N+++  LCK G+  +A
Sbjct: 225 VQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEA 284

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                 ++A++      D+IT   ++    ++ D   A  ++++M +  +  D+V YN L
Sbjct: 285 GDVWERMVANNH---QPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSL 341

Query: 303 INGFCLNGDISSAFAYFCQMLKRG-----------------------------------F 327
           + GFC  G +  A+ ++  M   G                                    
Sbjct: 342 LKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSL 401

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
            PD++T++T+++ LC++G  +++         +G   D+ SY ++I GLC  G +  A +
Sbjct: 402 SPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVK 461

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
               +   S  P  HI+N +I+G+ +    S+A  +   M     S    T+N LI    
Sbjct: 462 LYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLC 521

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           +     +A    +EML  G   DV TY  LI   C    I  AL L++++L +G+  D++
Sbjct: 522 KAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVV 581

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQ 533
            +  LI G C+ G + EA ++ ++++
Sbjct: 582 MHNILIHGLCSAGKVDEASQLLSEMK 607



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 209/413 (50%), Gaps = 6/413 (1%)

Query: 150 VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALH 209
            P++ T+N ++  LC  GDL++A  +   +     +P+  TY+  ++G+ + N LD AL+
Sbjct: 156 APNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALY 215

Query: 210 LFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
           L   M +  ++P+ V +N L+    + G    A++ + E L  D G A+ ++ T  +++D
Sbjct: 216 LLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMR-VWEQLVRDPG-ASPNLATYNVMLD 273

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
              K G   +A  +W  M   N Q D++ Y  +I+G C + D+ SA   + +M+K G +P
Sbjct: 274 GLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVP 333

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           DV+ YN+LL   C  G++ EA  F+  +S +G+  +  SY  +++GL   G + KA + L
Sbjct: 334 DVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATD-L 391

Query: 390 LSMLEK--SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
             +LEK  S+ P+   ++ +I G    G  + +  I +   + G   + F+++++I    
Sbjct: 392 WELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLC 451

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G + DA  L +++ +D   P+   YN LI   C       A+++Y +M     +P  I
Sbjct: 452 KDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTI 511

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           TY  LI G C      EA     ++   G  +D   +  L +   R K+ D A
Sbjct: 512 TYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGA 564



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 206/453 (45%), Gaps = 36/453 (7%)

Query: 132 GKIGTALWLRRKMIQ-KGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           G+   A+ +  ++++  G  P++ T+N +++ LCK+G  ++A  V   M      P+  T
Sbjct: 243 GEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMIT 302

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF----- 245
           Y   I G CR  ++D A  ++S M   G+ P+ V +N L+   C  G +G+A KF     
Sbjct: 303 YGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMS 362

Query: 246 ----------------------------LGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
                                       L E+L  DD   + D++T + ++    + G  
Sbjct: 363 VSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDD-SLSPDMVTFSTMIHGLCEKGFA 421

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            ++L +  +      + D  +Y+ +I+G C +G +  A   + ++    F P+   YN L
Sbjct: 422 NKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNAL 481

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +N  C+  K  +A   Y  +++   +P  I+Y T+I GLC     ++A  F   MLEK  
Sbjct: 482 INGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGC 541

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           + + + +  +I G  R   +  A ++ + +L  G+ ++V   N LI      G + +A  
Sbjct: 542 MLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQ 601

Query: 458 LKKEML-LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
           L  EM   +   P+V TYN L+      G    A  L+  +L  G+ PDII+Y   IKG 
Sbjct: 602 LLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGL 661

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           C+     E  ++  ++   G+    I + IL +
Sbjct: 662 CSCNRTPEGVQLLNEMLASGIIPTAITWNILVR 694



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 194/411 (47%), Gaps = 6/411 (1%)

Query: 115 ETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADH 174
           + D   +  +I  LC    + +A  +  +MI+ G VPDV+ +N L+   C  G + +A  
Sbjct: 297 QPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWK 356

Query: 175 VIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMA-NNGIRPNRVTHNILVHAL 233
               MS +    N  +YN  + G      +DKA  L+  +  ++ + P+ VT + ++H L
Sbjct: 357 FWDSMS-VSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGL 415

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C+KG    +++ L E  A   GK   D  + + ++    K+G    A+ L+  +   + +
Sbjct: 416 CEKGFANKSLQILEE--ARTSGKEL-DEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFK 472

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            +   YN LINGFC     S A   + QM +    P  ITYNTL++ LCK  K  EAS F
Sbjct: 473 PNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRF 532

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
              + + G   D  +Y ++I+GLC    I  A      +L+K +  +  + N++I G   
Sbjct: 533 TREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCS 592

Query: 414 CGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
            G +  A  +  ++        NV T+N L+      G    A SL   +L +G+ PD+ 
Sbjct: 593 AGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDII 652

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMK 523
           +YN  I   C+       +QL +EML  GI P  IT+  L++     G ++
Sbjct: 653 SYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/361 (22%), Positives = 153/361 (42%), Gaps = 37/361 (10%)

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A + L   L  + G  + + +    +    F + D F A +L +  F + I  ++  YN+
Sbjct: 106 AFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFA-SLSHGAFGRRIAPNLQTYNI 164

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           ++   C+ GD+  A   F  +  RG  PD ITY+TL++   K  +LD A +    +    
Sbjct: 165 MLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYE 224

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSML-EKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           V PD + Y  ++ G   +G+  KA      ++ +    P    +NV++DG  + G    A
Sbjct: 225 VQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEA 284

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
             + + M++     ++ T+  +I    R   +  A  +  EM+  G+ PDV  YN L+  
Sbjct: 285 GDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKG 344

Query: 481 SCNLGHIHLALQLYDEMLRRGI-----------------------------------TPD 505
            C+ G +  A + +D M   GI                                   +PD
Sbjct: 345 FCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPD 404

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           ++T++ +I G C +G   ++ ++  + +T G  +D   +  +     +    D A  +++
Sbjct: 405 MVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYE 464

Query: 566 K 566
           K
Sbjct: 465 K 465


>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Glycine max]
          Length = 587

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 187/373 (50%), Gaps = 6/373 (1%)

Query: 138 LW-LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFIT 196
           +W + ++M+Q G VP++  +N L +   K GD+E+A+ ++ EM       +  TYN  ++
Sbjct: 180 VWKIYKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLS 239

Query: 197 GYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK 256
            YC+     +AL + + M   GI  + V++N L++  CK+G + +A++   E+       
Sbjct: 240 LYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEI-----KN 294

Query: 257 ATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAF 316
           AT + +T T L+D Y K  +  +AL +   M  K +   +V YN ++   C +G I  A 
Sbjct: 295 ATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDAN 354

Query: 317 AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
               +M +R    D IT NTL+N  CK G L  A  F   + + G+ PD  +YK +I G 
Sbjct: 355 KLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGF 414

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C   ++  A+E + SML+    P    ++ I+DGY +  ++    ++ D  LS G+  +V
Sbjct: 415 CKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRGICLDV 474

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
             + ALI +  +   I  A  L   M   GI  +   Y  +  A  N+G++  A  + +E
Sbjct: 475 SVYRALIRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAYAYWNVGNVSAASSMLEE 534

Query: 497 MLRRGITPDIITY 509
           M RR +   +  Y
Sbjct: 535 MARRRLMITVKLY 547



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 182/395 (46%), Gaps = 5/395 (1%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           ++LV    K    + A  V  +M      P+       +    +         ++  M  
Sbjct: 130 SWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQ 189

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G+ PN   +N L HA  K G +  A + L E+   D      D+ T   L+  Y K G 
Sbjct: 190 VGVVPNIYIYNCLFHACSKSGDVERAEQLLNEM---DVKGVLQDIFTYNTLLSLYCKKGM 246

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
            ++AL++ N M ++ I  DIV+YN LI GFC  G +  A   F ++  +   P+ +TY T
Sbjct: 247 HYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEI--KNATPNHVTYTT 304

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L++  CK  +L+EA     ++   G+ P  ++Y +I++ LC  G I  A + L  M E+ 
Sbjct: 305 LIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERK 364

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
           +  +    N +I+ Y + GDL +A   ++ ML  G+  + FT+ ALI    +   +  A 
Sbjct: 365 LQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAK 424

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            L   ML  G  P   TY+ ++       ++   L L DE L RGI  D+  Y  LI+  
Sbjct: 425 ELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRGICLDVSVYRALIRSS 484

Query: 517 CARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY 551
           C    ++ AE +F  ++  G++ + + +  +   Y
Sbjct: 485 CKVERIQCAERLFYHMEGKGISGESVIYTSIAYAY 519



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 186/389 (47%), Gaps = 5/389 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P +     L+N L K G       + + M ++   PN   YN       +  ++++A  L
Sbjct: 159 PHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQL 218

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
            + M   G+  +  T+N L+   CKKG+  +A+     +  + +G    D+++   L+  
Sbjct: 219 LNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRM--EREG-INLDIVSYNSLIYG 275

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           + K G   +A+ +++++  KN   + V Y  LI+G+C   ++  A      M  +G  P 
Sbjct: 276 FCKEGRMREAMRMFSEI--KNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPG 333

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
           V+TYN++L  LC+ G++ +A+     +S+  +  D I+  T+I   C  GD+  A +F  
Sbjct: 334 VVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKN 393

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            MLE  + P+P  +  +I G+ +  +L +A  +   ML  G + +  T++ ++    +  
Sbjct: 394 KMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKD 453

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
           ++    +L  E L  GI  DV  Y  LI +SC +  I  A +L+  M  +GI+ + + YT
Sbjct: 454 NMDAVLALPDEFLSRGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKGISGESVIYT 513

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAI 539
            +   +   GN+  A  +  ++    L I
Sbjct: 514 SIAYAYWNVGNVSAASSMLEEMARRRLMI 542



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 144/306 (47%), Gaps = 2/306 (0%)

Query: 265 TILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           T+L++S  K+G       ++  M Q  +  +I  YN L +    +GD+  A     +M  
Sbjct: 165 TVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDV 224

Query: 325 RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
           +G L D+ TYNTLL+  CK+G   EA      + + G+  D +SY ++I G C  G + +
Sbjct: 225 KGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMRE 284

Query: 385 AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
           A      +  K+  P    +  +IDGY +  +L  A  +  LM + G+   V T+N+++ 
Sbjct: 285 AMRMFSEI--KNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILR 342

Query: 445 AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
              + G I DA  L  EM    +  D  T N LI A C +G +  AL+  ++ML  G+ P
Sbjct: 343 KLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKP 402

Query: 505 DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIH 564
           D  TY  LI G C    ++ A+E+   +   G    +  +  +   Y +    D    + 
Sbjct: 403 DPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALP 462

Query: 565 QKWLLR 570
            ++L R
Sbjct: 463 DEFLSR 468



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 10/258 (3%)

Query: 94  LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDV 153
           ++E +     +++  P   T  T       +I   C   ++  AL + + M  KG  P V
Sbjct: 282 MREAMRMFSEIKNATPNHVTYTT-------LIDGYCKTNELEEALKMCKLMEAKGLYPGV 334

Query: 154 LTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFST 213
           +T+N ++ +LC+ G +  A+ ++ EMSE +   +  T N  I  YC++ +L  AL   + 
Sbjct: 335 VTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNK 394

Query: 214 MANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFK 273
           M   G++P+  T+  L+H  CK   L  A + +  +L   D   T    T + ++D Y K
Sbjct: 395 MLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSML---DAGFTPSYCTYSWIVDGYNK 451

Query: 274 NGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVIT 333
             +    LAL ++   + I  D+  Y  LI   C    I  A   F  M  +G   + + 
Sbjct: 452 KDNMDAVLALPDEFLSRGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKGISGESVI 511

Query: 334 YNTLLNCLCKQGKLDEAS 351
           Y ++       G +  AS
Sbjct: 512 YTSIAYAYWNVGNVSAAS 529


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 197/412 (47%), Gaps = 6/412 (1%)

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGD---LEKADHVIREMSEMRPSPNCATYNAFI 195
           + RR +I +G      T++  ++ LC   +   L     ++ +M  +   P+   +N ++
Sbjct: 67  YYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYL 126

Query: 196 TGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDG 255
              CR N L+ AL LF +M + G  P+ V++ I++ ALC      +A K    ++   D 
Sbjct: 127 NLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLI---DK 183

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
             + D      L+      G    A  L   + +  ++ + + YN LI+GFC  G +  A
Sbjct: 184 GLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKA 243

Query: 316 FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
                 M + G +PD++TYN LLN  C++G +DEA      + ++GV PD  SY  +++G
Sbjct: 244 MKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKG 303

Query: 376 LCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSN 435
            C    + +A   ++  ++   + +   +N +I  + +       + + + M   G+  +
Sbjct: 304 FCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPD 363

Query: 436 VFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYD 495
           + TFN LI A  R GS      L  EM    + PD   Y  ++   C  G + +A  ++ 
Sbjct: 364 MVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFR 423

Query: 496 EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           +M+  G+ PD+I+Y  L+ G C    + +A  +F ++Q+ GL  D + ++++
Sbjct: 424 DMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLI 475



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 181/376 (48%), Gaps = 3/376 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC   ++ TAL L   M  KG  PDV+++  +++ LC     ++A  V R + +   SP+
Sbjct: 129 LCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPD 188

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
                A + G C    +D A  L   +   G++ N + +N L+   C+ G +  A+K   
Sbjct: 189 YKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKI-- 246

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
           +      G    D++T  IL++   + G   +A+ L   M +  ++ D+ +YN L+ GFC
Sbjct: 247 KAFMSRTG-CVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFC 305

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
               +  A     + ++   + DV++YNT++   CK  +  +    +  +   G+ PD +
Sbjct: 306 KANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMV 365

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           ++  +I      G     ++ L  M +  V+P+   +  ++D   + G +  A S+   M
Sbjct: 366 TFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDM 425

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +  GV+ +V ++NAL+    +   + DA  L  EM   G++PD  TY L++G       I
Sbjct: 426 VENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKI 485

Query: 488 HLALQLYDEMLRRGIT 503
            LA +++D+M+ RG T
Sbjct: 486 SLACRVWDQMMERGFT 501



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 157/322 (48%), Gaps = 3/322 (0%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  DY+  VA++  LC GG++  A  L   +I+ G   + L +N L++  C++G ++KA 
Sbjct: 185 LSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAM 244

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            +   MS     P+  TYN  +   C    +D+A+ L  TM  +G+ P+  ++N L+   
Sbjct: 245 KIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGF 304

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK  ++  A   + E +     K   DV++   ++ ++ K     +   L+ +M  K I+
Sbjct: 305 CKANMVDRAHLMMVERM---QTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIR 361

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            D+V +N+LI+ F   G          +M K   LPD I Y  +++ LCK GK+D A   
Sbjct: 362 PDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSV 421

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  + + GV PD ISY  ++ G C    ++ A      M  K + P+   + +I+ G  R
Sbjct: 422 FRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIR 481

Query: 414 CGDLSNAFSIRDLMLSFGVSSN 435
              +S A  + D M+  G + N
Sbjct: 482 GKKISLACRVWDQMMERGFTLN 503



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 133/273 (48%), Gaps = 2/273 (0%)

Query: 282 ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCL 341
           +L  DM       DI A+N  +N  C    + +A   F  M  +G  PDV++Y  +++ L
Sbjct: 105 SLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDAL 164

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           C   + DEA+  +  L   G++PD  +   ++ GLC  G +  A E ++ +++  V    
Sbjct: 165 CNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNS 224

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
            ++N +IDG+ R G +  A  I+  M   G   ++ T+N L+      G + +A  L + 
Sbjct: 225 LVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVET 284

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLA-LQLYDEMLRRGITPDIITYTELIKGHCARG 520
           M   G+ PD+++YN L+   C    +  A L + + M  +G+  D+++Y  +I   C   
Sbjct: 285 MERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMC-DVVSYNTVITAFCKAR 343

Query: 521 NMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRR 553
             ++  E+F ++   G+  D + F IL   + R
Sbjct: 344 RTRKGYELFEEMCGKGIRPDMVTFNILIDAFLR 376



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 38/289 (13%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  G++  A+ ++  M + G VPD++T+N L+N  C+ G +++A  ++  M   
Sbjct: 229 ALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERS 288

Query: 183 RPSPNCATYNAFITGYCRVNELDKA----------------------------------- 207
              P+  +YN  + G+C+ N +D+A                                   
Sbjct: 289 GVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKG 348

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             LF  M   GIRP+ VT NIL+ A  ++G      K L E+      +   D I  T +
Sbjct: 349 YELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEM---TKMRVLPDCIFYTAV 405

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +D   KNG    A +++ DM +  +  D+++YN L+NGFC    +  A   F +M  +G 
Sbjct: 406 VDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGL 465

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGL 376
            PD +TY  ++  L +  K+  A   +  + + G   ++   +T++  +
Sbjct: 466 YPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNAI 514



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 100/235 (42%), Gaps = 35/235 (14%)

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           GF+PD+  +NT LN LC+Q +L+ A   +  +   G  PD +SY  II  LC       A
Sbjct: 114 GFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALC------NA 167

Query: 386 REFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILA 445
           + F              +W  +ID                     G+S +     AL++ 
Sbjct: 168 KRF---------DEAAKVWRRLIDK--------------------GLSPDYKACVALVVG 198

Query: 446 ETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPD 505
              GG +  A+ L   ++  G+  +   YN LI   C +G +  A+++   M R G  PD
Sbjct: 199 LCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPD 258

Query: 506 IITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA 560
           ++TY  L+   C  G + EA  +   ++  G+  D   +  L K + +    D+A
Sbjct: 259 LVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRA 313



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 134/356 (37%), Gaps = 78/356 (21%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           M+Q +I    +AY   I+     G I+ A   F QM +       + YN  +  L +  +
Sbjct: 1   MYQSSIGAHRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSR 60

Query: 347 LDEASHFYGV---------------------------------------LSKTGVAPDQI 367
           L  A H+Y                                         +   G  PD  
Sbjct: 61  LHLAHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIW 120

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDG----------------- 410
           ++ T +  LC    +  A E   SM  K   P+   + +IID                  
Sbjct: 121 AFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRL 180

Query: 411 --------YGRC----------GDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
                   Y  C          G +  A+ +   ++  GV  N   +NALI    R G +
Sbjct: 181 IDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRV 240

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
             A  +K  M   G  PD+ TYN+L+   C  G +  A++L + M R G+ PD+ +Y EL
Sbjct: 241 DKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNEL 300

Query: 513 IKGHCARGNMKEAEEVF--AKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           +KG C + NM +   +    ++QT G+  D + +  +   + + + + K  ++ ++
Sbjct: 301 LKGFC-KANMVDRAHLMMVERMQTKGMC-DVVSYNTVITAFCKARRTRKGYELFEE 354



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 8/141 (5%)

Query: 93  ILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPD 152
           ++K+ LD +  MR        +  D   + AV+  LC  GK+  A  + R M++ G  PD
Sbjct: 382 VVKKLLDEMTKMR--------VLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPD 433

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFS 212
           V+++N L+N  CK   +  A H+  EM      P+  TY   + G  R  ++  A  ++ 
Sbjct: 434 VISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWD 493

Query: 213 TMANNGIRPNRVTHNILVHAL 233
            M   G   NR     LV+A+
Sbjct: 494 QMMERGFTLNRHLSETLVNAI 514


>gi|14488297|gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza sativa]
 gi|222612440|gb|EEE50572.1| hypothetical protein OsJ_30721 [Oryza sativa Japonica Group]
          Length = 854

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 214/476 (44%), Gaps = 44/476 (9%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
           GG++  A  +  +M  +G  P++   N ++  LC  G +  +  ++  M      P+  +
Sbjct: 204 GGEVRAAWKVFEEMAARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACS 263

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           YN  + G+C   + + A +LF  M   G  P  VT+NIL++ LC++G + +A     E+L
Sbjct: 264 YNILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEML 323

Query: 251 ADDDGKATSDVITSTILMDSYFKNGD-------------------------------KFQ 279
                    + IT  +L+D Y K G                                KF 
Sbjct: 324 ---QAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFG 380

Query: 280 ALALW-------NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVI 332
             AL+       ++MF   + TD +  ++LI   C +G +  A+   C  +++G    V 
Sbjct: 381 KAALFVLDQQQLHEMFGSQLSTDGI--DMLICRLCWDGRLDDAWELLCSAIEKGVQVSVS 438

Query: 333 TYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSM 392
            +N L+    K+G  +EA   Y  ++K G+AP   +   +I GLC  G + +AR FL  M
Sbjct: 439 GFNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYM 498

Query: 393 LEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSI 452
           +          + + +D   R GD+  A    D M   G+  +   F+A +    R   +
Sbjct: 499 VRMGYCVIAS-FTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFL 557

Query: 453 FDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTEL 512
            +A++   EM+  G+ P+ FTYN LI A C  G++  AL+L  +M + G+ PDI T   L
Sbjct: 558 DEAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNIL 617

Query: 513 IKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWL 568
           I G C  G +  A  +F  + ++GL  D + +  +   Y R K+ + A     K L
Sbjct: 618 IDGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKML 673



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 195/464 (42%), Gaps = 48/464 (10%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++  CL G+   A  L  +M   G  P ++T+N L+NELC+ G + +A  +  EM +  
Sbjct: 267 LMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAG 326

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  T+N  I GY +  +++ A    + M   G+ P+  T NIL     K    G A 
Sbjct: 327 VEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYK---FGKAA 383

Query: 244 KF------LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIV 297
            F      L E+          D++   +  D    +     A  L     +K +Q  + 
Sbjct: 384 LFVLDQQQLHEMFGSQLSTDGIDMLICRLCWDGRLDD-----AWELLCSAIEKGVQVSVS 438

Query: 298 AYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF---- 353
            +N LI  +   G    AF  +  M K G  P   T N L+  LC +G+LD+A  F    
Sbjct: 439 GFNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYM 498

Query: 354 ----YGVLSK--------------------------TGVAPDQISYKTIIQGLCIHGDIV 383
               Y V++                            G+ PD +++   + GLC    + 
Sbjct: 499 VRMGYCVIASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLD 558

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A    + M+ + +VP    +N +I  + R G++S A  +   M   G+  ++FT N LI
Sbjct: 559 EAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILI 618

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               R G +  A +L   M   G+ PDV TYN ++ A C    I+ A+   ++ML  G  
Sbjct: 619 DGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCE 678

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
           PDI TY   +   C+   +  A  +  ++     A + + +  L
Sbjct: 679 PDIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTL 722



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 171/361 (47%), Gaps = 41/361 (11%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           L+  LC  G L+ A  ++    E     + + +NA I  Y +    ++A  L+ TM   G
Sbjct: 408 LICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNALIAAYSKEGFDEEAFELYKTMNKLG 467

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS-TILMDSYFKNGDK 277
           + P+  T N L+  LC +G L  A  FL  ++     +    VI S TI +DS F+ GD 
Sbjct: 468 LAPSSSTLNYLIMGLCNRGRLDQARLFLEYMV-----RMGYCVIASFTIYLDSSFRAGDV 522

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
             AL  W+DM        IV                            G  PD + ++  
Sbjct: 523 LGALKCWDDM-------KIV----------------------------GLQPDFVAFSAY 547

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           +N LC+   LDEA + +  + + G+ P+  +Y ++I   C  G++ +A +    M +  +
Sbjct: 548 VNGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGL 607

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
           VP+    N++IDG+ R G L+ A ++   M S G++ +V T+N ++ A  R   I  A  
Sbjct: 608 VPDIFTRNILIDGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMI 667

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
              +ML DG  PD+FTYN+ + + C+   ++ A+ L DE+      P+ +TY  L+ G C
Sbjct: 668 FMNKMLADGCEPDIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTLMDGIC 727

Query: 518 A 518
           +
Sbjct: 728 S 728



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 4/215 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G +  AL L +KM Q G VPD+ T N L++  C+ G L  A+++   M  +
Sbjct: 581 SLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLFFGMYSI 640

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             +P+  TYN  +  YCR  +++ A+   + M  +G  P+  T+NI +H+LC   LL  A
Sbjct: 641 GLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEPDIFTYNIWMHSLCSNHLLNRA 700

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           +  L E+ A D      + +T   LMD    +    +A+ L   + +   Q + V  N+L
Sbjct: 701 MMLLDELAATD---CAPNSVTYNTLMDGICSDVLD-RAMILTGRLIKLAFQPNTVTINIL 756

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            + FC NG    A  +  ++    F  D  T N L
Sbjct: 757 FSHFCKNGFGKRALVWAEKLRDDSFNFDDATRNIL 791



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 120/232 (51%), Gaps = 4/232 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D+    A +  LC    +  A     +MI++G VP+  T+N L++  C+ G++ +A 
Sbjct: 537 LQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEAL 596

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            + ++M +    P+  T N  I G+CR   L+ A +LF  M + G+ P+ VT+N +++A 
Sbjct: 597 KLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAY 656

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           C+   +  A+ F+ ++LAD       D+ T  I M S   N    +A+ L +++   +  
Sbjct: 657 CRSKDINGAMIFMNKMLAD---GCEPDIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCA 713

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            + V YN L++G C +  +  A     +++K  F P+ +T N L +  CK G
Sbjct: 714 PNSVTYNTLMDGIC-SDVLDRAMILTGRLIKLAFQPNTVTINILFSHFCKNG 764



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 97/211 (45%)

Query: 338 LNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSV 397
           L+     G  DEA      + + G  P   +   +++ L   G++  A +    M  +  
Sbjct: 163 LHAFLAAGMADEALDVLARVRRAGDTPSLSALAALLRLLFRGGEVRAAWKVFEEMAARGP 222

Query: 398 VPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFS 457
            P   I+N +I G    G +  +  +  +M  F V  +  ++N L+      G   DAF+
Sbjct: 223 RPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYNILMKGHCLYGQAEDAFN 282

Query: 458 LKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHC 517
           L  EM + G  P + TYN+L+   C  G +  A  L+DEML+ G+  + IT+  LI G+ 
Sbjct: 283 LFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAGVEVNTITFNVLIDGYA 342

Query: 518 ARGNMKEAEEVFAKIQTLGLAIDHIPFRILK 548
             G M+ A    A+++ +GL  D   F IL 
Sbjct: 343 KAGQMENANMACAEMKAMGLMPDCCTFNILS 373



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 2/174 (1%)

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK-SVVPEP 401
           + G++  A   +  ++  G  P+   +  +I GLC H  +V+    LL ++ +  VVP+ 
Sbjct: 203 RGGEVRAAWKVFEEMAARGPRPNLAIFNAMIFGLC-HRGLVRVSGGLLGVMGRFHVVPDA 261

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +N+++ G+   G   +AF++ D M   G    + T+N L+    R G + +A  L  E
Sbjct: 262 CSYNILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDE 321

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG 515
           ML  G+  +  T+N+LI      G +  A     EM   G+ PD  T+  L  G
Sbjct: 322 MLQAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAG 375



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 2/140 (1%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L  D   +  ++   C    I  A+    KM+  G  PD+ T+N  ++ LC    L +A 
Sbjct: 642 LTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEPDIFTYNIWMHSLCSNHLLNRAM 701

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++ E++    +PN  TYN  + G C  + LD+A+ L   +     +PN VT NIL    
Sbjct: 702 MLLDELAATDCAPNSVTYNTLMDGICS-DVLDRAMILTGRLIKLAFQPNTVTINILFSHF 760

Query: 234 CKKGLLGDAVKFLGEVLADD 253
           CK G  G       E L DD
Sbjct: 761 CKNG-FGKRALVWAEKLRDD 779



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 59/121 (48%)

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           RGG +  A+ + +EM   G  P++  +N +I   C+ G + ++  L   M R  + PD  
Sbjct: 203 RGGEVRAAWKVFEEMAARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDAC 262

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKW 567
           +Y  L+KGHC  G  ++A  +F +++  G     + + IL     R     +AR +  + 
Sbjct: 263 SYNILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEM 322

Query: 568 L 568
           L
Sbjct: 323 L 323


>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
 gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
          Length = 584

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 229/465 (49%), Gaps = 13/465 (2%)

Query: 82  NPQ-AVFNA-LDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALW 139
           NP   +FN+ LD+++KE++D  +       +   ++ D   +  +++ LCL  +IG    
Sbjct: 116 NPSLKIFNSILDVLVKEDIDLARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFK 175

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L + +  +G  P+V+ +N L++ LC  G + +A  ++ E+ E    PN  T+N  I GYC
Sbjct: 176 LLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE----PNDVTFNVLICGYC 231

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           + +   +AL L     + G  P+ VT   +V  LC  G + +AV+ L  V   +      
Sbjct: 232 KEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERV---ESKGGVV 288

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           DV+    L+  + K G       L  +M +K    +   YN LI+GFC +G + SA   F
Sbjct: 289 DVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMF 348

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT-GVAPDQIS-YKTIIQGLC 377
             M   G   + +T++TL+  L  +G+ ++      ++ +T GV    IS Y +++ GL 
Sbjct: 349 NDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLY 408

Query: 378 IHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVF 437
               + +A EFL+ M  +++ P     ++ I G+   G +  A  + D M + G   +  
Sbjct: 409 RKNMLNEALEFLMKM--ENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSAL 466

Query: 438 TFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEM 497
            ++ LI    + G + +A  L  EM+  G FP   T+N LI   C LG    AL+L ++M
Sbjct: 467 VYDCLIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDM 526

Query: 498 LRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
           + RG  PD  +Y+ LI   C + + ++A  +  ++   G+  D++
Sbjct: 527 VGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENGITPDYL 571



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 125/508 (24%), Positives = 206/508 (40%), Gaps = 83/508 (16%)

Query: 67  KTRHWFSNKDSDNEGNPQAVFNAL--DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAV 124
           +T  W S     N  + Q+ + AL   L+       ++ + D  P    L  D    + +
Sbjct: 33  QTFEWASK--LPNFTHSQSTYRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDESIFLTI 90

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE-MSEMR 183
           IR L     I   + +   + + G  P +   N +++ L K  D++ A    R+ M    
Sbjct: 91  IRGLGRARMIRDVIKVLDLVTRYGKNPSLKIFNSILDVLVK-EDIDLARKFYRKKMMGAG 149

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +  TY   + G C  N + +   L   + + G++PN V +N L+HALC  G +G   
Sbjct: 150 IQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVG--- 206

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
                                              +A +L N++ + N     V +NVLI
Sbjct: 207 -----------------------------------RARSLMNEIKEPND----VTFNVLI 227

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            G+C   +   A     +    GF+PDV+T   ++  LC  G++ EA      +   G  
Sbjct: 228 CGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGV 287

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            D +++ T+I+G C  G +      L  M  K  +P    +N +I G+   G L +A  +
Sbjct: 288 VDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDM 347

Query: 424 RDLMLSFGVSSNVFTFNALI------------------LAETR---GGSIFDAFSL---- 458
            + M + G++ N  TF+ LI                  + ETR   GGSI    S+    
Sbjct: 348 FNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGL 407

Query: 459 -KKEML---------LDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
            +K ML         ++ +FP     +L I   C  G I  A ++YD+M   G  P  + 
Sbjct: 408 YRKNMLNEALEFLMKMENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALV 467

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLG 536
           Y  LI G C  G ++EA E+  ++  LG
Sbjct: 468 YDCLIHGFCQEGCVREALELMNEMVFLG 495



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 140/315 (44%), Gaps = 34/315 (10%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+  LC  G++  A+ +  ++  KG V DV+ HN L+   CK G ++    +++EM    
Sbjct: 261 VVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKG 320

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN  TYNA I+G+C    L+ AL +F+ M  +GI  N VT + L+  L  +G   D  
Sbjct: 321 CLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGF 380

Query: 244 KFLGEVLADDDGKATSDVIT-STILMDSYFKN--GDKFQALALWNDMFQKNIQTDI---- 296
           K L E++ +  G     +   +++L   Y KN   +  + L    ++F + +   +    
Sbjct: 381 KIL-ELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEFLMKMENLFPRAVDRSLRILG 439

Query: 297 --------------------------VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
                                     + Y+ LI+GFC  G +  A     +M+  G+ P 
Sbjct: 440 FCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPV 499

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
             T+N L++  C+ GK   A      +   G  PD  SY  +I  LC      KA   LL
Sbjct: 500 ASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLL 559

Query: 391 SMLEKSVVPEPHIWN 405
            M+E  + P+  IWN
Sbjct: 560 QMVENGITPDYLIWN 574



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 169/412 (41%), Gaps = 51/412 (12%)

Query: 153 VLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC----ATYNAFITGYCRVNELDKAL 208
           V TH  +V+    I D + A   ++        PN     +TY A I             
Sbjct: 12  VPTHERIVH---LILDQKSAPQALQTFEWASKLPNFTHSQSTYRALIHKLLTFRRFHTVQ 68

Query: 209 HLFSTMANN-GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
           HL   M  + G+ P+      ++  L +  ++ D +K L             D++T    
Sbjct: 69  HLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRDVIKVL-------------DLVTR--- 112

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
              Y KN     +L ++N +    ++ DI              D++  F Y  +M+  G 
Sbjct: 113 ---YGKN----PSLKIFNSILDVLVKEDI--------------DLARKF-YRKKMMGAGI 150

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
             D  TY  L+  LC   ++ E      V+   G+ P+ + Y T++  LC +G + +AR 
Sbjct: 151 QGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARS 210

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
            +  + E    P    +NV+I GY +  +   A  + +   S G   +V T   ++    
Sbjct: 211 LMNEIKE----PNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILC 266

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
             G + +A  + + +   G   DV  +N LI   C  G + L   L  EM R+G  P+  
Sbjct: 267 NVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNAD 326

Query: 508 TYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF-RILKKRYRRMKESD 558
           TY  LI G C  G ++ A ++F  ++T G+  + + F  ++K  + R +  D
Sbjct: 327 TYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTED 378



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 104/257 (40%), Gaps = 38/257 (14%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  G + +AL +   M   G   + +T + L+  L   G  E    ++  M E 
Sbjct: 330 ALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEET 389

Query: 183 RP------SP-NCATYNAF----------------------------ITGYCRVNELDKA 207
           R       SP N   Y  +                            I G+C    + +A
Sbjct: 390 RGVCGGSISPYNSVLYGLYRKNMLNEALEFLMKMENLFPRAVDRSLRILGFCEEGAIQEA 449

Query: 208 LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
             ++  M N G  P+ + ++ L+H  C++G + +A++ + E++        S   T   L
Sbjct: 450 KRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVAS---TFNAL 506

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           +  + + G    AL L  DM  +    D  +Y+ LI+  C       A +   QM++ G 
Sbjct: 507 ISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENGI 566

Query: 328 LPDVITYNTLLNCLCKQ 344
            PD + +N+L +CL +Q
Sbjct: 567 TPDYLIWNSLFHCLSQQ 583


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 187/374 (50%), Gaps = 3/374 (0%)

Query: 159 LVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNG 218
           +V  LCK G LE+   +I +       PN   YN  I GYC+  +++ A  LF  +   G
Sbjct: 191 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 250

Query: 219 IRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKF 278
             P   T+  +++  CKKG      + L E+   +    T +V     ++D+ +K+G   
Sbjct: 251 FLPTVETYGAIINGFCKKGDFKAIDRLLMEM---NSRGLTVNVQVYNTIIDARYKHGHIV 307

Query: 279 QALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLL 338
           +A+     M +   + DIV YN LI+G C +G +S A     Q L +G +P+  +Y  L+
Sbjct: 308 KAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLI 367

Query: 339 NCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVV 398
           +  CKQG  D AS++   +++ G  PD ++Y  ++ GL + G++  A      MLE+ V 
Sbjct: 368 HAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVF 427

Query: 399 PEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSL 458
           P+  I+N+++ G  +   L  A  +   ML   V  + F +  L+    R G++ +A  L
Sbjct: 428 PDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKL 487

Query: 459 KKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCA 518
            +  +  G+ P +  YN +I   C  G +  A+   + M +R + PD  TY+ +I G+  
Sbjct: 488 FELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVK 547

Query: 519 RGNMKEAEEVFAKI 532
           + ++  A+++F ++
Sbjct: 548 QHDLDGAQKMFREM 561



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 187/384 (48%), Gaps = 3/384 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +++ LC  GK+     L      +G +P+++ +N L++  CK GD+E A+ +  E+    
Sbjct: 191 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 250

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P   TY A I G+C+  +      L   M + G+  N   +N ++ A  K G +  AV
Sbjct: 251 FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAV 310

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           + +  ++   +     D++T   L+    ++G   +A  L      K +  +  +Y  LI
Sbjct: 311 ETIEGMI---ECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLI 367

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           + +C  G    A  +  +M +RG  PD++TY  L++ L   G++D A      + + GV 
Sbjct: 368 HAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVF 427

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           PD   Y  ++ GLC    +  A+  L  ML++SV+P+  ++  ++DG+ R G+L  A  +
Sbjct: 428 PDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKL 487

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            +L +  G++  +  +NA+I    + G + DA +    M    + PD FTY+ +I     
Sbjct: 488 FELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVK 547

Query: 484 LGHIHLALQLYDEMLRRGITPDII 507
              +  A +++ EM++    P+++
Sbjct: 548 QHDLDGAQKMFREMVKMKCKPNVM 571



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 223/485 (45%), Gaps = 33/485 (6%)

Query: 86  VFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMI 145
           VF+ ++++L EN+ R++ M    P R  +         VI+     G +  AL L   ++
Sbjct: 109 VFSEMEVVL-ENM-RVEEM---SPTREAMSI-------VIQAYSDSGLVEKALELYYFVL 156

Query: 146 QKGT-VPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNEL 204
           +  T  PDV+  N L+N L K+G +E A      M               + G C+  +L
Sbjct: 157 KTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIM---------------VKGLCKEGKL 201

Query: 205 DKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITS 264
           ++   L       G  PN + +N L+   CKKG +  A     E+           V T 
Sbjct: 202 EEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG---FLPTVETY 258

Query: 265 TILMDSYFKNGDKFQAL-ALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQML 323
             +++ + K GD F+A+  L  +M  + +  ++  YN +I+    +G I  A      M+
Sbjct: 259 GAIINGFCKKGD-FKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMI 317

Query: 324 KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIV 383
           + G  PD++TYNTL++  C+ GK+ EA          G+ P++ SY  +I   C  G   
Sbjct: 318 ECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYD 377

Query: 384 KAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALI 443
           +A  +L+ M E+   P+   +  ++ G    G++  A +IR+ ML  GV  +   +N L+
Sbjct: 378 RASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILM 437

Query: 444 LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGIT 503
               +   +  A  L  EML   + PD F Y  L+      G++  A +L++  + +G+ 
Sbjct: 438 SGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMN 497

Query: 504 PDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           P I+ Y  +IKG+C  G MK+A     +++   LA D   +  +   Y +  + D A+ +
Sbjct: 498 PGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKM 557

Query: 564 HQKWL 568
            ++ +
Sbjct: 558 FREMV 562



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 192/442 (43%), Gaps = 23/442 (5%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           IRD+ LG K     W+ R   Q     +   ++ L+  L +     + + V+  M     
Sbjct: 70  IRDVELGLKFFD--WVSRG--QYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEM 125

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFS-TMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           SP     +  I  Y     ++KAL L+   +      P+ +  N L++ L K G +  A 
Sbjct: 126 SPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIAR 185

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           KF                  + I++    K G   +   L  D + +    +I+ YN LI
Sbjct: 186 KF------------------TCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLI 227

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G+C  GD+  A   F ++  +GFLP V TY  ++N  CK+G           ++  G+ 
Sbjct: 228 DGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLT 287

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
            +   Y TII     HG IVKA E +  M+E    P+   +N +I G  R G +S A  +
Sbjct: 288 VNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQL 347

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            +  L  G+  N F++  LI A  + G    A +   EM   G  PD+ TY  L+     
Sbjct: 348 LEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVV 407

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
            G + +AL + ++ML RG+ PD   Y  L+ G C +  +  A+ + A++    +  D   
Sbjct: 408 AGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFV 467

Query: 544 FRILKKRYRRMKESDKARDIHQ 565
           +  L   + R    D+AR + +
Sbjct: 468 YATLVDGFIRNGNLDEARKLFE 489



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 145/315 (46%), Gaps = 3/315 (0%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           A+I   C  G       L  +M  +G   +V  +N +++   K G + KA   I  M E 
Sbjct: 260 AIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIEC 319

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  I+G CR  ++ +A  L       G+ PN+ ++  L+HA CK+G    A
Sbjct: 320 GCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRA 379

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
             +L E+    +     D++T   L+      G+   AL +   M ++ +  D   YN+L
Sbjct: 380 SNWLIEM---TERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNIL 436

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G C    + +A     +ML +  LPD   Y TL++   + G LDEA   + +  + G+
Sbjct: 437 MSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGM 496

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  + Y  +I+G C  G +  A   +  M ++ + P+   ++ +IDGY +  DL  A  
Sbjct: 497 NPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQK 556

Query: 423 IRDLMLSFGVSSNVF 437
           +   M+      NV 
Sbjct: 557 MFREMVKMKCKPNVM 571



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 124/258 (48%), Gaps = 3/258 (1%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
           G + C  + D   +  +I   C  GK+  A  L  + + KG +P+  ++  L++  CK G
Sbjct: 315 GMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQG 374

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
             ++A + + EM+E    P+  TY A + G     E+D AL +   M   G+ P+   +N
Sbjct: 375 GYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYN 434

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
           IL+  LCKK  L  A   L E+L   D     D      L+D + +NG+  +A  L+   
Sbjct: 435 ILMSGLCKKFKLPAAKLLLAEML---DQSVLPDAFVYATLVDGFIRNGNLDEARKLFELT 491

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            +K +   IV YN +I G+C  G +  A A   +M KR   PD  TY+T+++   KQ  L
Sbjct: 492 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 551

Query: 348 DEASHFYGVLSKTGVAPD 365
           D A   +  + K    P+
Sbjct: 552 DGAQKMFREMVKMKCKPN 569


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 185/425 (43%), Gaps = 2/425 (0%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
           G  R  +  D R   A++   C  GK+     L   M + G   D  T   +V  LC+ G
Sbjct: 171 GMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKG 230

Query: 168 DLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHN 227
             +      R M E    PN   Y A+I G C+   + +A H+   M   G++PN  TH 
Sbjct: 231 RFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHT 290

Query: 228 ILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDM 287
            L+  LCK G    A +   +++     K   +V T T+++  Y + G   +A  L   M
Sbjct: 291 TLIDGLCKIGWTERAFRLFLKLIKSSSYK--PNVHTYTVMIGGYCREGKLARAEMLLVRM 348

Query: 288 FQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKL 347
            ++ ++ +   Y  LI G C  G    AF    +M + GFLP++ TYN +++  CK+GK+
Sbjct: 349 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI 408

Query: 348 DEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            EA     + +  G+  D+I+Y  +I   C  G I  A +    M+E    P+   +  +
Sbjct: 409 QEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSL 468

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I  Y +   +  +    D  L  G+     T+ ++I    + G    A  + + M+ +G 
Sbjct: 469 ISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGC 528

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
           F D  TY  LI   C    +  A  LY+ ML + + P  +T   L   +C R     A  
Sbjct: 529 FADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVS 588

Query: 528 VFAKI 532
           V  ++
Sbjct: 589 VLDRL 593



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 185/401 (46%), Gaps = 17/401 (4%)

Query: 145 IQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS--PNCA-TYNAFITGYCRV 201
           + +G++P  + H  +   +   G+  +       + EMR    P C  T N  +      
Sbjct: 102 VARGSLP--MAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLET 159

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV----LADDDGKA 257
                A  +F  M   G+ P+  +   LV   C++G + +    L  +     + D+  A
Sbjct: 160 GSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDN--A 217

Query: 258 TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFA 317
           T  V+  ++     FK+  +F     +  M +     ++V Y   I+G C    +  AF 
Sbjct: 218 TCTVVVRSLCEKGRFKDVSEF-----FRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFH 272

Query: 318 YFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH-FYGVLSKTGVAPDQISYKTIIQGL 376
              +M+ RG  P+V T+ TL++ LCK G  + A   F  ++  +   P+  +Y  +I G 
Sbjct: 273 VLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGY 332

Query: 377 CIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNV 436
           C  G + +A   L+ M+E+ + P  + +  +I G+ + G    AF + + M   G   N+
Sbjct: 333 CREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNI 392

Query: 437 FTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDE 496
           +T+NA+I    + G I +A+ + +     G+  D  TY +LI   C  GHI  AL L+D 
Sbjct: 393 YTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDR 452

Query: 497 MLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
           M+  G  PDI  YT LI  +C +  M+E+++ F K   +GL
Sbjct: 453 MVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGL 493



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 199/439 (45%), Gaps = 4/439 (0%)

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
            G++  A  +  +M   G    V T N+++    + G    A  V   M+     P+  +
Sbjct: 124 AGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERS 183

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVL 250
           + A +   CR  ++++   L + M   G   +  T  ++V +LC+KG   D  +F   +L
Sbjct: 184 FRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML 243

Query: 251 ADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
              +     +V+  T  +D   K     QA  +  +M  + ++ ++  +  LI+G C  G
Sbjct: 244 ---ETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIG 300

Query: 311 DISSAFAYFCQMLKRG-FLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
               AF  F +++K   + P+V TY  ++   C++GKL  A      + + G+ P+  +Y
Sbjct: 301 WTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTY 360

Query: 370 KTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLS 429
            T+I G C  G   +A E +  M ++  +P  + +N +IDG+ + G +  A+ +  +  S
Sbjct: 361 TTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATS 420

Query: 430 FGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHL 489
            G+  +  T+  LI    + G I  A  L   M+ +G  PD+  Y  LI   C    +  
Sbjct: 421 QGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEE 480

Query: 490 ALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
           + + +D+ L  G+ P   TYT +I G+C  G    A  VF ++   G   D I +  L  
Sbjct: 481 SQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALIS 540

Query: 550 RYRRMKESDKARDIHQKWL 568
              +    ++A+ +++  L
Sbjct: 541 GLCKESRLEEAKALYEGML 559



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 193/422 (45%), Gaps = 7/422 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           V+R LC  G+        R+M++ GT P+V+ +   ++ LCK   +++A HV+ EM    
Sbjct: 222 VVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRG 281

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLF-STMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             PN  T+   I G C++   ++A  LF   + ++  +PN  T+ +++   C++G L  A
Sbjct: 282 LKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARA 341

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              L  ++       T+   T T L+  + K G   +A  L N M Q+    +I  YN +
Sbjct: 342 EMLLVRMVEQGLKPNTN---TYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAV 398

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           I+GFC  G I  A+        +G   D ITY  L+   CKQG +  A   +  + + G 
Sbjct: 399 IDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGC 458

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            PD  +Y ++I   C    + ++++F    L   ++P    +  +I GY + G  + A  
Sbjct: 459 CPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALR 518

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + + M+  G  ++  T+ ALI    +   + +A +L + ML   + P   T   L    C
Sbjct: 519 VFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYC 578

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
                 +A+ + D + +R     + T   +++   A G++  A     K+     A+DH 
Sbjct: 579 RREKTSIAVSVLDRLDKR---QQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHA 635

Query: 543 PF 544
            +
Sbjct: 636 TY 637



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 6/246 (2%)

Query: 114 LETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKAD 173
           L+ D   +  +I + C  G I  AL L  +M++ G  PD+  +  L++  C+   +E++ 
Sbjct: 423 LKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQ 482

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
               +   +   P   TY + I GYC+V     AL +F  M  NG   + +T+  L+  L
Sbjct: 483 KFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGL 542

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
           CK+  L +A      +L   D +     +T   L   Y +      A+++  D   K  Q
Sbjct: 543 CKESRLEEAKALYEGML---DKRLVPCEVTRVTLTFEYCRREKTSIAVSVL-DRLDKRQQ 598

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
              V  +V++      GD+ +A  +  ++L   +  D  TY   +N   +  +   AS  
Sbjct: 599 VHTV--DVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALASEM 656

Query: 354 YGVLSK 359
               SK
Sbjct: 657 SEKFSK 662


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 135/565 (23%), Positives = 230/565 (40%), Gaps = 106/565 (18%)

Query: 84  QAVFNALDLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRD---------------- 127
           QA     DL++   LD L+ MR+ G V  + ET     VA +++                
Sbjct: 282 QAACKMKDLVMA--LDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGF 339

Query: 128 ---------------LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKA 172
                           C G ++G AL    +M ++G  PD +  + ++   CK  ++EKA
Sbjct: 340 GIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKA 399

Query: 173 DHVIREMSEMRPSPNCATYNAFITG----------------------------------Y 198
             + + M  +  +P+    +  I G                                   
Sbjct: 400 VEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLL 459

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           C+  ++D A      M N GI PN V +N ++ A C+   +  A     E+L   +    
Sbjct: 460 CKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEML---EKGLQ 516

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL---------- 308
            +  T +IL+D +FKN D+  A  + N M   N + + V YN +ING C           
Sbjct: 517 PNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEM 576

Query: 309 --------------------------NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLC 342
                                      GD  SA   + +M + G  P+V+T+ +L+N  C
Sbjct: 577 LQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFC 636

Query: 343 KQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPH 402
           K  ++D A      +    +  D  +Y  +I G C   D+  A      +LE  ++P   
Sbjct: 637 KSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVS 696

Query: 403 IWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEM 462
           ++N +I G+   G +  A  +   M++ G+S ++FT+  +I    + G++  A  L  E+
Sbjct: 697 VYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSEL 756

Query: 463 LLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNM 522
           L  GI PD   Y +L+      G    A ++ +EM ++  TP+++ Y+ +I GH   GN+
Sbjct: 757 LALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNL 816

Query: 523 KEAEEVFAKIQTLGLAIDHIPFRIL 547
            EA  V  ++   GL  D   F +L
Sbjct: 817 NEAFRVHDEMLEKGLVHDDTIFNLL 841



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 210/446 (47%), Gaps = 6/446 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVP-DVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           ++  C    +  AL L R+M +KG VP    T+  ++    K G++E+A  V  EM    
Sbjct: 281 VQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFG 340

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              +     + ITG+C  NEL KAL  F+ M   G+ P++V  ++++   CK   +  AV
Sbjct: 341 IPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAV 400

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           +    +     G A S V+    ++    K      AL ++ND F+  I    +   + +
Sbjct: 401 EIYKRM--KSVGIAPSSVLVHK-MIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFL 457

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
              C  G + +A ++   M  +G  P+V+ YN ++   C+   +D A   +  + + G+ 
Sbjct: 458 -LLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQ 516

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS- 422
           P+  +Y  +I G   + D   A E +  M+  +      I+N II+G  + G  S A   
Sbjct: 517 PNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEM 576

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +++L+     S    ++N++I    + G    A    +EM  +GI P+V T+  LI   C
Sbjct: 577 LQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFC 636

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
               + LAL++  EM  + +  D+  Y  LI G C + +MK A  +F+++  LGL  +  
Sbjct: 637 KSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVS 696

Query: 543 PFRILKKRYRRMKESDKARDIHQKWL 568
            +  L   +R + + D A D+++K +
Sbjct: 697 VYNNLISGFRNLGKMDAAIDLYKKMV 722



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 183/386 (47%), Gaps = 33/386 (8%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC  GK+  A    R M  KG  P+V+ +N ++   C++ +++ A  +  EM E    PN
Sbjct: 459 LCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPN 518

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             TY+  I G+ +  +   A  + + M  +    N V +N +++ LCK G    A + L 
Sbjct: 519 NFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578

Query: 248 EVLAD---------------------------------DDGKATSDVITSTILMDSYFKN 274
            ++ +                                  +   + +V+T T L++ + K+
Sbjct: 579 NLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKS 638

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
                AL + ++M  K+++ D+ AY  LI+GFC   D+ +A+  F ++L+ G +P+V  Y
Sbjct: 639 NRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVY 698

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           N L++     GK+D A   Y  +   G++ D  +Y T+I GL   G+++ A +    +L 
Sbjct: 699 NNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLA 758

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             +VP+  ++ V+++G  + G    A  + + M     + NV  ++ +I    R G++ +
Sbjct: 759 LGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNE 818

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGA 480
           AF +  EML  G+  D   +NLL+  
Sbjct: 819 AFRVHDEMLEKGLVHDDTIFNLLVSG 844



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/391 (19%), Positives = 171/391 (43%), Gaps = 21/391 (5%)

Query: 190 TYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
            +N  +  Y R   +D A+  F+ M +  + P     N ++ +L +  L+ +A +   ++
Sbjct: 171 AFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230

Query: 250 LADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLN 309
           +         D +T+ +LM +  +     +A+ ++  +  +  + D + +++ +   C  
Sbjct: 231 VLIG---VAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKM 287

Query: 310 GDISSAFAYFCQMLKRGFLP-DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            D+  A     +M ++G +P    TY +++    K+G ++EA      +   G+    I+
Sbjct: 288 KDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIA 347

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
             ++I G C   ++ KA +F   M E+ + P+  +++V+I+ + +  ++  A  I   M 
Sbjct: 348 ATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMK 407

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN----- 483
           S G++ +    + +I    +  S   A           IF D F   +  G  CN     
Sbjct: 408 SVGIAPSSVLVHKMIQGCLKAESPEAALE---------IFNDSFETWIAHGFMCNKIFLL 458

Query: 484 ---LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
               G +  A      M  +GI P+++ Y  ++  HC   NM  A  +F+++   GL  +
Sbjct: 459 LCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPN 518

Query: 541 HIPFRILKKRYRRMKESDKARDIHQKWLLRN 571
           +  + IL   + + ++   A ++  + +  N
Sbjct: 519 NFTYSILIDGFFKNQDEQNAWEVINQMIASN 549



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 3/217 (1%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C   ++  AL +  +M  K    DV  +  L++  CK  D++ A  +  E+ E+
Sbjct: 630 SLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLEL 689

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              PN + YN  I+G+  + ++D A+ L+  M N+GI  +  T+  ++  L K G L  A
Sbjct: 690 GLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILA 749

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
                E+LA        D I   +L++   K G   +A  +  +M +K+   +++ Y+ +
Sbjct: 750 SDLYSELLA---LGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTV 806

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           I G    G+++ AF    +ML++G + D   +N L++
Sbjct: 807 IAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVS 843



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 5/139 (3%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
           +D  K M + G + C L T    +  +I  L   G +  A  L  +++  G VPD + + 
Sbjct: 715 IDLYKKMVNDG-ISCDLFT----YTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYV 769

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            LVN L K G   +A  ++ EM +   +PN   Y+  I G+ R   L++A  +   M   
Sbjct: 770 VLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEK 829

Query: 218 GIRPNRVTHNILVHALCKK 236
           G+  +    N+LV    +K
Sbjct: 830 GLVHDDTIFNLLVSGRVEK 848


>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 484

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 185/384 (48%), Gaps = 2/384 (0%)

Query: 149 TVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKAL 208
             P++ T+  L+   C  G L+     +  + +     +   +   + G C       A+
Sbjct: 87  VTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 146

Query: 209 HL-FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
            +    M   G  PN  ++NIL+  LC +    +A++ L +++ DD G    DV++ T +
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL-QMMPDDGGDCPPDVVSYTTV 205

Query: 268 MDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF 327
           ++ +FK GD  +A   +++M  + I  ++V Y+ +I   C    +  A      M+K G 
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 328 LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKARE 387
           +P+  TYN++++  C  G+  EA  F   +   GV PD ++Y +++  LC +G   +AR+
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 388 FLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAET 447
              SM ++ + PE   +  ++ GY   G L     + DLM+  G+  N + F+ LI A  
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 448 RGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDII 507
           + G +  A  +  +M   G+ PD  TY  +IG  C  G +  A++ +++M+   ++P  I
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 508 TYTELIKGHCARGNMKEAEEVFAK 531
            Y  LI   C      +A++ F K
Sbjct: 446 VYNSLIHSLCIFDKWDKAKDYFLK 469



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 177/387 (45%), Gaps = 5/387 (1%)

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
           +PN  TY   I   C    LD        +   G R + +    L+  LC      DA+ 
Sbjct: 88  TPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 147

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK--NIQTDIVAYNVL 302
            +   +         +V +  IL+          +AL L   M     +   D+V+Y  +
Sbjct: 148 IVLRRMTQLG--CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTV 205

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           INGF   GD+  A+  + +ML RG LP+V+TY++++  LCK   +D+A      + K GV
Sbjct: 206 INGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGV 265

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P+  +Y +I+ G C  G   +A  FL  M    V P+   +N ++D   + G  + A  
Sbjct: 266 MPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARK 325

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           + D M   G+   + T+  L+      G++ +   L   M+ +GI P+ + +++LI A  
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHI 542
             G +  A+ ++ +M ++G+ PD +TY  +I   C  G +++A   F ++    L+  +I
Sbjct: 386 KQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNI 445

Query: 543 PFRILKKRYRRMKESDKARDIHQK-WL 568
            +  L        + DKA+D   K W+
Sbjct: 446 VYNSLIHSLCIFDKWDKAKDYFLKCWI 472



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 41/323 (12%)

Query: 124 VIRDLCLGGKIGTAL-WLRRKMIQKGTVPDVLTHNYLVNELC------------------ 164
           +++ LC   +   A+  + R+M Q G +P+V ++N L+  LC                  
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 165 -------------------KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELD 205
                              K GDL+KA     EM +    PN  TY++ I   C+   +D
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 206 KALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITST 265
           KA+ + ++M  NG+ PN  T+N +VH  C  G   +A+ FL ++ +D       DV+T  
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG---VEPDVVTYN 308

Query: 266 ILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR 325
            LMD   KNG   +A  +++ M ++ ++ +I  Y  L+ G+   G +         M++ 
Sbjct: 309 SLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 368

Query: 326 GFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKA 385
           G  P+   ++ L+    KQGK+D+A   +  + + G+ PD ++Y T+I  LC  G +  A
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428

Query: 386 REFLLSMLEKSVVPEPHIWNVII 408
             +   M+++ + P   ++N +I
Sbjct: 429 MRYFEQMIDERLSPGNIVYNSLI 451



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 144/296 (48%), Gaps = 6/296 (2%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L+ L+ M D G        D   +  VI      G +  A     +M+ +G +P+V+
Sbjct: 179 QEALELLQMMPDDGG---DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVV 235

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++ ++  LCK   ++KA  V+  M +    PNC TYN+ + GYC   +  +A+     M
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            ++G+ P+ VT+N L+  LCK G   +A K    +          ++ T   L+  Y   
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG---LKPEITTYGTLLQGYATK 352

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +   L + M +  I  +   +++LI  +   G +  A   F +M ++G  PD +TY
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            T++  LCK G++++A  ++  +    ++P  I Y ++I  LCI     KA+++ L
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYFL 468



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 41/328 (12%)

Query: 280 ALALWNDMFQKN---IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGF--------- 327
           A++ +N M +     +  ++  Y +LI   C  G +   FA    ++K+GF         
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 328 ---------------------------LPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
                                      +P+V +YN LL  LC + +  EA     ++   
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 361 G--VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
           G    PD +SY T+I G    GD+ KA      ML++ ++P    ++ II    +   + 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   M+  GV  N  T+N+++      G   +A    K+M  DG+ PDV TYN L+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
              C  G    A +++D M +RG+ P+I TY  L++G+  +G + E   +   +   G+ 
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 539 IDHIPFRILKKRYRRMKESDKARDIHQK 566
            +H  F IL   Y +  + D+A  +  K
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSK 399



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 3/210 (1%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R + +++   C  G+   A+   +KM   G  PDV+T+N L++ LCK G   +A  +   
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M++    P   TY   + GY     L +   L   M  NGI PN    +IL+ A  K+G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
           +  A+    ++          D +T   ++    K+G    A+  +  M  + +    + 
Sbjct: 390 VDQAMLVFSKMRQQG---LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFL 328
           YN LI+  C+      A  YF +     F+
Sbjct: 447 YNSLIHSLCIFDKWDKAKDYFLKCWIEAFV 476



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 5/151 (3%)

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEML---LDGIFPDVFTYN 475
           +A  + D +L  G  ++++  N   LA+    S   A S    M     D + P++ TY 
Sbjct: 37  DARHVFDELLRRGRGASIYGLNC-ALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE-VFAKIQT 534
           +LIG+ C  G + L       ++++G   D I +T L+KG CA     +A + V  ++  
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           LG   +   + IL K       S +A ++ Q
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQ 186


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 203/441 (46%), Gaps = 3/441 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC   ++ +A    + + Q+G   +    N +++  C  G + KA  V   M +    P+
Sbjct: 258 LCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPD 317

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             +Y+  + G C+  ++    ++   MA NGI PN V+++ L+H LC+ G +  A +   
Sbjct: 318 VHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFK 377

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
            +    D     D I  +I++    ++ D      LWNDM   N   D   Y+ LI  +C
Sbjct: 378 RL---KDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYC 434

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            +  +  A   F  M+  G  P+V+T   L++    +G + EA  F   + + GV P+  
Sbjct: 435 RHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLC 494

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y+ II GLC              M+++  VP+  ++++IIDG+ +  DL  AF +   M
Sbjct: 495 TYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKM 554

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +  G   N+FT+ +LI        + +  +L K M+ +G+ PD   Y  LI   C   ++
Sbjct: 555 VDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNM 614

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             AL+++ EM   G++ D   YT LI G      M  A+    ++   GL    + +  L
Sbjct: 615 KAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDL 674

Query: 548 KKRYRRMKESDKARDIHQKWL 568
              Y ++ +  KA  ++   L
Sbjct: 675 IIGYFKIGDEKKAMVMYNSML 695



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 205/483 (42%), Gaps = 56/483 (11%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVN------ELCKIGDLEKADHVIR 177
           +++ L  G +I     L   M   G  P++ +++ L++      +LC    LE+A  ++ 
Sbjct: 182 LLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLC----LEEAQELLS 237

Query: 178 EMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKG 237
           EM      PN ATY  ++ G CR  ++  A +    +   G   N    N ++H  C  G
Sbjct: 238 EMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDG 297

Query: 238 LLGDAVKFLGEVLADDDGKA----TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQ 293
            +  AV+         DG        DV + +IL+D   K GD      +  +M +  I 
Sbjct: 298 QVHKAVEVF-------DGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGIT 350

Query: 294 TDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHF 353
            ++V+Y+ L++G C  G +  AF  F ++  +GF  D I Y+ +L+  C+   L+     
Sbjct: 351 PNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDL 410

Query: 354 YGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGR 413
           +  +      PD  +Y ++I   C H  + +A E    M+   + P      +++ G+  
Sbjct: 411 WNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSN 470

Query: 414 CGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFT 473
            G +  AF   D +  FGV  N+ T+  +I    +     D + +  +M+  G  PD   
Sbjct: 471 EGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVL 530

Query: 474 YNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKG------------------ 515
           Y+++I        +  A +LY +M+  G  P+I TYT LI G                  
Sbjct: 531 YSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMI 590

Query: 516 -----------------HCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESD 558
                            +C R NMK A E+F +++T GL+ D   +  L   + ++   D
Sbjct: 591 GEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMD 650

Query: 559 KAR 561
            A+
Sbjct: 651 GAQ 653



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 187/378 (49%), Gaps = 5/378 (1%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNE--LDKALHLFSTM 214
           N+L+  L +   +     +  +M    PSPN  +Y+  ++ Y    +  L++A  L S M
Sbjct: 180 NFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEM 239

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G+RPN  T+   ++ LC+   +  A  FL ++L        S    + I    +  +
Sbjct: 240 EVEGVRPNAATYGTYLYGLCRAKQVKSAWNFL-QMLCQRGYPCNSYCFNAVI--HGFCHD 296

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +A+ +++ M +     D+ +Y++L++G C  GD+ + +    +M + G  P++++Y
Sbjct: 297 GQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSY 356

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           ++LL+ LC+ G+++ A   +  L   G   D I Y  ++ G C H D+    +    M+ 
Sbjct: 357 SSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVH 416

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
            + VP+ + ++ +I  Y R   L  A  + +LM+  G+  NV T   L+   +  G I +
Sbjct: 417 HNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGE 476

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           AF    ++   G+ P++ TY ++I   C +   +    ++ +M++RG  PD + Y+ +I 
Sbjct: 477 AFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIID 536

Query: 515 GHCARGNMKEAEEVFAKI 532
           G     +++EA  ++ K+
Sbjct: 537 GFVKALDLQEAFRLYYKM 554



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 180/398 (45%), Gaps = 38/398 (9%)

Query: 108 GPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIG 167
           G  +C    D   +  ++  LC  G + T  ++  +M + G  P++++++ L++ LC+ G
Sbjct: 308 GMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAG 367

Query: 168 DLE--------------KADHVI---------------------REMSEMRPSPNCATYN 192
            +E              K DH++                      +M      P+   Y+
Sbjct: 368 RVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYS 427

Query: 193 AFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLAD 252
           + I  YCR  +L +AL +F  M  +GI PN VT  ILVH    +GL+G+A  FL +V   
Sbjct: 428 SLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKV--- 484

Query: 253 DDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
                  ++ T  ++++   K         ++ DM ++    D V Y+++I+GF    D+
Sbjct: 485 RQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDL 544

Query: 313 SSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTI 372
             AF  + +M+  G  P++ TY +L+N LC   KL E    +  +   G+ PD+I Y ++
Sbjct: 545 QEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSL 604

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I   C   ++  A E    M  + +  +  ++  +I G+ +   +  A    + M++ G+
Sbjct: 605 IACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGL 664

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPD 470
           +  V T+  LI+   + G    A  +   ML  GI PD
Sbjct: 665 TPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPD 702



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/252 (21%), Positives = 101/252 (40%), Gaps = 76/252 (30%)

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLE-KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           Y T+I+   +  ++    + L++ +E K V  E  + N ++ G      +    S+ D M
Sbjct: 146 YATVIR---VFVELSMFEDALVTYVEAKKVGVELQVCNFLLKGLVEGNQIMYVRSLFDDM 202

Query: 428 LSFGVSSNVFTFNALILAETRGGSIF--DAFSLKKEMLLDGIFPDVFTY----------- 474
              G S N+++++ L+   T G  +   +A  L  EM ++G+ P+  TY           
Sbjct: 203 KISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAK 262

Query: 475 ------------------------NLLIGASCNLGHIHLALQLYD--------------- 495
                                   N +I   C+ G +H A++++D               
Sbjct: 263 QVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYS 322

Query: 496 --------------------EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
                               EM R GITP++++Y+ L+ G C  G ++ A E+F +++  
Sbjct: 323 ILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQ 382

Query: 536 GLAIDHIPFRIL 547
           G   DHI + I+
Sbjct: 383 GFKHDHIVYSIV 394


>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g19290
 gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 205/403 (50%), Gaps = 4/403 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQK-GTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           V+   C  G +  A+   ++     G   +V+T+N L+N    IGD+E    V+R MSE 
Sbjct: 231 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER 290

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
             S N  TY + I GYC+   +++A H+F  +    +  ++  + +L+   C+ G + DA
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
           V+    ++  + G  T+  I ++ L++ Y K+G   +A  +++ M   +++ D   YN L
Sbjct: 351 VRVHDNMI--EIGVRTNTTICNS-LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTL 407

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ++G+C  G +  A     QM ++  +P V+TYN LL    + G   +    + ++ K GV
Sbjct: 408 VDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGV 467

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
             D+IS  T+++ L   GD  +A +   ++L + ++ +    NV+I G  +   ++ A  
Sbjct: 468 NADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKE 527

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           I D +  F     V T+ AL     + G++ +AF++K+ M   GIFP +  YN LI  + 
Sbjct: 528 ILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAF 587

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
              H++    L  E+  RG+TP + TY  LI G C  G + +A
Sbjct: 588 KYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 630



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 207/493 (41%), Gaps = 77/493 (15%)

Query: 129 CLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNC 188
           C  G+I  A+ +   MI+ G   +    N L+N  CK G L +A+ +   M++    P+ 
Sbjct: 342 CRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH 401

Query: 189 ATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGE 248
            TYN  + GYCR   +D+AL L   M    + P  +T+NIL+    + G   D +     
Sbjct: 402 HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKM 461

Query: 249 VLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC- 307
           +L        +D I+ + L+++ FK GD  +A+ LW ++  + + TD +  NV+I+G C 
Sbjct: 462 MLKRG---VNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCK 518

Query: 308 ---LN-------------------------------GDISSAFAYFCQMLKRGFLPDVIT 333
              +N                               G++  AFA    M ++G  P +  
Sbjct: 519 MEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEM 578

Query: 334 YNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSML 393
           YNTL++   K   L++ +     L   G+ P   +Y  +I G C  G I KA      M+
Sbjct: 579 YNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMI 638

Query: 394 EKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF-----GVSS-------------- 434
           EK +    +I + I +   R   +  A  +   ++ F     G  S              
Sbjct: 639 EKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLK 698

Query: 435 -------------------NVFTFNALILAETRGGSIFDAFSLKKEML-LDGIFPDVFTY 474
                              N   +N  I    + G + DA  L  ++L  D   PD +TY
Sbjct: 699 TQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTY 758

Query: 475 NLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
            +LI      G I+ A  L DEM  +GI P+I+TY  LIKG C  GN+  A+ +  K+  
Sbjct: 759 TILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQ 818

Query: 535 LGLAIDHIPFRIL 547
            G+  + I +  L
Sbjct: 819 KGITPNAITYNTL 831



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 189/410 (46%), Gaps = 3/410 (0%)

Query: 97  NLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTH 156
           N+D+             LE +   + ++I    + G +     + R M ++G   +V+T+
Sbjct: 240 NVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTY 299

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
             L+   CK G +E+A+HV   + E +   +   Y   + GYCR  ++  A+ +   M  
Sbjct: 300 TSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE 359

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
            G+R N    N L++  CK G L +A +    +   +D     D  T   L+D Y + G 
Sbjct: 360 IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM---NDWSLKPDHHTYNTLVDGYCRAGY 416

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +AL L + M QK +   ++ YN+L+ G+   G      + +  MLKRG   D I+ +T
Sbjct: 417 VDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCST 476

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           LL  L K G  +EA   +  +   G+  D I+   +I GLC    + +A+E L ++    
Sbjct: 477 LLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 536

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P    +  +  GY + G+L  AF++++ M   G+   +  +N LI    +   +    
Sbjct: 537 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVA 596

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDI 506
            L  E+   G+ P V TY  LI   CN+G I  A     EM+ +GIT ++
Sbjct: 597 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNV 646



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 194/391 (49%), Gaps = 6/391 (1%)

Query: 174 HVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHAL 233
            ++R   E   SP    ++  +  Y     +  ALH+F  M N G  P+ ++ N L+  L
Sbjct: 143 ELVRVFKEFSFSP--TVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNL 200

Query: 234 CKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQK-NI 292
            +KG    A+    ++++ +    + DV T +I++++Y ++G+  +A+    +      +
Sbjct: 201 VRKGENFVALHVYDQMISFE---VSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGL 257

Query: 293 QTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASH 352
           + ++V YN LING+ + GD+         M +RG   +V+TY +L+   CK+G ++EA H
Sbjct: 258 ELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEH 317

Query: 353 FYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYG 412
            + +L +  +  DQ  Y  ++ G C  G I  A     +M+E  V     I N +I+GY 
Sbjct: 318 VFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYC 377

Query: 413 RCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVF 472
           + G L  A  I   M  + +  +  T+N L+    R G + +A  L  +M    + P V 
Sbjct: 378 KSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVM 437

Query: 473 TYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKI 532
           TYN+L+     +G  H  L L+  ML+RG+  D I+ + L++     G+  EA +++  +
Sbjct: 438 TYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENV 497

Query: 533 QTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
              GL  D I   ++     +M++ ++A++I
Sbjct: 498 LARGLLTDTITLNVMISGLCKMEKVNEAKEI 528



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 205/409 (50%), Gaps = 8/409 (1%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G +  AL +   M   G +P +L+ N L++ L + G+   A HV  +M     SP+  T 
Sbjct: 169 GLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTC 228

Query: 192 NAFITGYCRVNELDKALHLFS--TMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEV 249
           +  +  YCR   +DKA+ +F+  T ++ G+  N VT+N L++      ++GD V+ +  V
Sbjct: 229 SIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGY---AMIGD-VEGMTRV 283

Query: 250 LADDDGKATS-DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCL 308
           L     +  S +V+T T L+  Y K G   +A  ++  + +K +  D   Y VL++G+C 
Sbjct: 284 LRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343

Query: 309 NGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQIS 368
            G I  A      M++ G   +    N+L+N  CK G+L EA   +  ++   + PD  +
Sbjct: 344 TGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT 403

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLML 428
           Y T++ G C  G + +A +    M +K VVP    +N+++ GY R G   +  S+  +ML
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMML 463

Query: 429 SFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIH 488
             GV+++  + + L+ A  + G   +A  L + +L  G+  D  T N++I   C +  ++
Sbjct: 464 KRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVN 523

Query: 489 LALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            A ++ D +      P + TY  L  G+   GN+KEA  V   ++  G+
Sbjct: 524 EAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 205/487 (42%), Gaps = 71/487 (14%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           ++I   C  G++  A  +  +M      PD  T+N LV+  C+ G +++A  +  +M + 
Sbjct: 371 SLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQK 430

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P   TYN  + GY R+      L L+  M   G+  + ++ + L+ AL K G   +A
Sbjct: 431 EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEA 490

Query: 243 VKFLGEVLAD----------------------DDGKATSD----------VITSTILMDS 270
           +K    VLA                       ++ K   D          V T   L   
Sbjct: 491 MKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHG 550

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
           Y+K G+  +A A+   M +K I   I  YN LI+G      ++       ++  RG  P 
Sbjct: 551 YYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPT 610

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP---------------DQISYKTIIQG 375
           V TY  L+   C  G +D+A      + + G+                 D+I    ++  
Sbjct: 611 VATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQ 670

Query: 376 LCIHGDIV-----KAREFLL------------------SMLEKSVVPEPHIWNVIIDGYG 412
             +  D++       +EFL                   S  +K +VP   ++NV I G  
Sbjct: 671 KIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLC 730

Query: 413 RCGDLSNAFSI-RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDV 471
           + G L +A  +  DL+ S     + +T+  LI      G I  AF+L+ EM L GI P++
Sbjct: 731 KAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNI 790

Query: 472 FTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAK 531
            TYN LI   C LG++  A +L  ++ ++GITP+ ITY  LI G    GN+ EA  +  K
Sbjct: 791 VTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEK 850

Query: 532 IQTLGLA 538
           +   GL 
Sbjct: 851 MIEKGLV 857



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 155/299 (51%), Gaps = 1/299 (0%)

Query: 273 KNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKR-GFLPDV 331
           + G+ F AL +++ M    +  D+   ++++N +C +G++  A  +  +     G   +V
Sbjct: 202 RKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNV 261

Query: 332 ITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLS 391
           +TYN+L+N     G ++  +    ++S+ GV+ + ++Y ++I+G C  G + +A      
Sbjct: 262 VTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFEL 321

Query: 392 MLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGS 451
           + EK +V + H++ V++DGY R G + +A  + D M+  GV +N    N+LI    + G 
Sbjct: 322 LKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381

Query: 452 IFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTE 511
           + +A  +   M    + PD  TYN L+   C  G++  AL+L D+M ++ + P ++TY  
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI 441

Query: 512 LIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLLR 570
           L+KG+   G   +   ++  +   G+  D I    L +   ++ + ++A  + +  L R
Sbjct: 442 LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR 500



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 56/103 (54%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  +I    + G I  A  LR +M  KG +P+++T+N L+  LCK+G++++A  ++
Sbjct: 754 DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLL 813

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
            ++ +   +PN  TYN  I G  +   + +A+ L   M   G+
Sbjct: 814 HKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 191/399 (47%), Gaps = 3/399 (0%)

Query: 139 WLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGY 198
           WL    +++    DV +   ++   C+ G+L+K+  ++  + +M  SPN   Y   I G 
Sbjct: 148 WLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGC 207

Query: 199 CRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKAT 258
           C+  ++++A   F  M   G+  N+ T  +L++ L KKGL  D      ++  +      
Sbjct: 208 CKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKING---LF 264

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            ++ T   LM+ Y   G   +A  L+++M ++ ++ ++V YN LI G C    +  A   
Sbjct: 265 PNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKL 324

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             QM K    P++ITYNTL+   C  G LD+AS     L   G++P  ++Y  +I+G   
Sbjct: 325 VDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSK 384

Query: 379 HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
            G+     +    M  + + P      V+ID Y R  ++  AF I   M  FG+  +V+ 
Sbjct: 385 AGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYV 444

Query: 439 FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
           +  LI      G++ ++  L + M    + P    YN +I   C   + + AL+L  EM 
Sbjct: 445 YGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREME 504

Query: 499 RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGL 537
            +G+ P++ +Y+ +I   C  G  +EAE +  K+  L L
Sbjct: 505 AKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQL 543



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 208/434 (47%), Gaps = 16/434 (3%)

Query: 146 QKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSE----MRPSPNCATYNAFITGYCRV 201
           Q  ++   L +  ++N   K   L+KA     EM +     RP+     +N+ +    R 
Sbjct: 86  QNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPN----IFNSLLGSLVRS 141

Query: 202 NELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDV 261
           N  +KA   F+ +    ++ +  +  I++   C+ G L  + + LG  L  D G  + +V
Sbjct: 142 NCFEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLG--LLQDMG-LSPNV 197

Query: 262 ITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQ 321
           +  T L+D   KNGD  +A   ++ M +  +  +   + VLING    G     F  F +
Sbjct: 198 VIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEK 257

Query: 322 MLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGD 381
           M   G  P++ TYN L+N  C +GK+  A   +  + + GV  + ++Y T+I G+C    
Sbjct: 258 MKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREER 317

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNA 441
           + +A + +  M + +V P    +N +I G+   G+L  A S+ D + S G+S ++ T+N 
Sbjct: 318 VWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNI 377

Query: 442 LILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           LI   ++ G+      L +EM   GI P   T  +LI A   L  +  A Q+Y  M + G
Sbjct: 378 LIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFG 437

Query: 502 ITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKA- 560
           + PD+  Y  LI G C +GNMKE+ ++F  +  + +    + +  +   Y +   S +A 
Sbjct: 438 LVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRAL 497

Query: 561 ---RDIHQKWLLRN 571
              R++  K L+ N
Sbjct: 498 RLLREMEAKGLVPN 511



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 173/382 (45%), Gaps = 3/382 (0%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I+  C  G +  +  L   +   G  P+V+ +  L++  CK GD+E+A     +M EM 
Sbjct: 168 MIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMG 227

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
              N  T+   I G  +         LF  M  NG+ PN  T+N L++  C +G +  A 
Sbjct: 228 LVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAF 287

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
               E+    +    ++V+T   L+    +    ++A  L + M +  +  +++ YN LI
Sbjct: 288 DLFDEM---RERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLI 344

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
            GFC  G++  A +   Q+   G  P ++TYN L+    K G     +     +   G++
Sbjct: 345 GGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGIS 404

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P +++   +I       ++ KA +   SM +  +VP+ +++ V+I G    G++  +  +
Sbjct: 405 PSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKL 464

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
              M    V  +   +N +I    +  + + A  L +EM   G+ P+V +Y+ +IG  C 
Sbjct: 465 FRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCK 524

Query: 484 LGHIHLALQLYDEMLRRGITPD 505
            G    A  L D+M+   + P 
Sbjct: 525 DGKWEEAEVLLDKMIELQLKPS 546



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 3/303 (0%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L  KM   G  P++ T+N L+NE C  G + +A  +  EM E     N  TYN  I G C
Sbjct: 254 LFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMC 313

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R   + +A  L   M    + PN +T+N L+   C  G L  A   L ++ ++     + 
Sbjct: 314 REERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNG---LSP 370

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
            ++T  IL++ Y K G+      L  +M  + I    V   VLI+ +    ++  AF  +
Sbjct: 371 SLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIY 430

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIH 379
             M K G +PDV  Y  L++ LC +G + E+S  +  + +  V P  + Y T+I G C  
Sbjct: 431 SSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKE 490

Query: 380 GDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTF 439
            +  +A   L  M  K +VP    ++ II    + G    A  + D M+   +  +    
Sbjct: 491 DNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASIL 550

Query: 440 NAL 442
           N +
Sbjct: 551 NMI 553



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 8/253 (3%)

Query: 98  LDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHN 157
            D    MR+ G     +E +   +  +I  +C   ++  A  L  +M +    P+++T+N
Sbjct: 287 FDLFDEMRERG-----VEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYN 341

Query: 158 YLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANN 217
            L+   C +G+L+KA  ++ ++     SP+  TYN  I GY +         L   M   
Sbjct: 342 TLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGR 401

Query: 218 GIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDK 277
           GI P++VT  +L+ A  +   +  A +    +   +      DV    +L+      G+ 
Sbjct: 402 GISPSKVTCTVLIDAYVRLQEMEKAFQIYSSM---EKFGLVPDVYVYGVLIHGLCMKGNM 458

Query: 278 FQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            ++  L+  M + +++   V YN +I+G+C   +   A     +M  +G +P+V +Y+++
Sbjct: 459 KESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSI 518

Query: 338 LNCLCKQGKLDEA 350
           +  LCK GK +EA
Sbjct: 519 IGVLCKDGKWEEA 531



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 5/138 (3%)

Query: 100 RLKTMRDTGPVRCTLE-----TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           RL+ M     +  ++E      D   +  +I  LC+ G +  +  L R M +    P  +
Sbjct: 419 RLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDV 478

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
            +N +++  CK  +  +A  ++REM      PN A+Y++ I   C+  + ++A  L   M
Sbjct: 479 IYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKM 538

Query: 215 ANNGIRPNRVTHNILVHA 232
               ++P+    N++  A
Sbjct: 539 IELQLKPSASILNMISKA 556


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 208/436 (47%), Gaps = 19/436 (4%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L R+M   G   +++T + L+N   ++G    +  V   + +     +  T+   I G C
Sbjct: 34  LHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANILKKGYGSDAITFTTLIKGLC 93

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGK-AT 258
              E+ KALH    +   G + N+V++  L++ LCK G    A++FL  +    DGK   
Sbjct: 94  LKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRI----DGKLVQ 149

Query: 259 SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            DV+    ++D   K+     A  L+ +M  K I   +V YN LI G C+   +  A   
Sbjct: 150 PDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGL 209

Query: 319 FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
             +M+     P V T++ L++  CK+GK+ EA + + V+ K  V P+ ++Y +++ G  +
Sbjct: 210 LHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHL 269

Query: 379 HGDIVKAREFLLSMLE--------------KSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
              + KA+    +M++              K + P+  I+N +IDG  + G    A    
Sbjct: 270 VNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFI 329

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
             M   G   ++FT+N+L+ A  +   +  A  L  ++   GI P V TYN+LI   C  
Sbjct: 330 GEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKS 389

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
           G +  A ++++++L +G   D+ TY  +IKG C +G   E   + +K++  G + D    
Sbjct: 390 GRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNC 449

Query: 545 RILKKRYRRMKESDKA 560
            I+ +      E+DKA
Sbjct: 450 EIIIRSLFDKGENDKA 465



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 201/400 (50%), Gaps = 18/400 (4%)

Query: 116 TDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHV 175
           +D      +I+ LCL G+I  AL    K++ +G   + +++  L+N LCK+G    A   
Sbjct: 80  SDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEF 139

Query: 176 IREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCK 235
           +R +      P+   YN  I G C+   ++ A +L+  M    I P+ VT+N L+  LC 
Sbjct: 140 LRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCI 199

Query: 236 KGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTD 295
              L DA+  L +++ +D       V T +IL+D++ K G   +A  ++  M +++++ +
Sbjct: 200 MAQLKDAIGLLHKMILED---INPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPN 256

Query: 296 IVAYNVLINGFCLNGDISSAFAYFCQMLK--------------RGFLPDVITYNTLLNCL 341
           IV YN L++G  L   +  A + F  M+K              +   PD++ YN+L++ L
Sbjct: 257 IVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGL 316

Query: 342 CKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEP 401
           CK G+   A  F G +   G  PD  +Y +++  LC +  + KA E L  + ++ + P  
Sbjct: 317 CKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSV 376

Query: 402 HIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKE 461
             +N++I+G  + G L +A  + + +L  G +++V+T+NA+I    + G   +  ++  +
Sbjct: 377 CTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSK 436

Query: 462 MLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRG 501
           M   G  PD     ++I +  + G    A + + EM+ RG
Sbjct: 437 MKDSGCSPDAKNCEIIIRSLFDKGENDKAGK-FREMIVRG 475



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 185/394 (46%), Gaps = 20/394 (5%)

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
           P+P+   +   +    + N     + L   M  NG+  N VT +IL++   + G    + 
Sbjct: 8   PTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSF 67

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
                +L    G   SD IT T L+      G+  +AL   + +  +  + + V+Y  LI
Sbjct: 68  SVFANILKKGYG---SDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLI 124

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           NG C  G   +A  +  ++  +   PDV+ YNT+++ LCK   +++A + Y  +    + 
Sbjct: 125 NGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRIC 184

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P  ++Y T+I GLCI   +  A   L  M+ + + P  + ++++ID + + G +  A ++
Sbjct: 185 PSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNV 244

Query: 424 RDLMLSFGVSSNVFTFNALILAE------TRGGSIF--------DAFSLKKEMLLDGIFP 469
             +M+   V  N+ T+N+L+          +  SIF        +A +L +EM    I+P
Sbjct: 245 FAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYP 304

Query: 470 DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           D+  YN LI   C  G    AL+   EM  RG  PDI TY  L+   C   ++ +A E+ 
Sbjct: 305 DMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELL 364

Query: 530 AKIQTLGLAIDHIPFRILKK---RYRRMKESDKA 560
            K++  G+      + IL     +  R+K+++K 
Sbjct: 365 TKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKV 398



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 123/277 (44%)

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           +  KN    I  +  ++         S   +   QM   G   +++T + L+NC  + G+
Sbjct: 3   LHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQ 62

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
              +   +  + K G   D I++ T+I+GLC+ G+I KA  F   ++ +        +  
Sbjct: 63  NALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGT 122

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +I+G  + G    A      +    V  +V  +N +I    +   + DAF+L  EM+   
Sbjct: 123 LINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKR 182

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           I P V TYN LI   C +  +  A+ L  +M+   I P + T++ LI   C  G MKEA+
Sbjct: 183 ICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAK 242

Query: 527 EVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
            VFA +    +  + + +  L   +  +    KA+ I
Sbjct: 243 NVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSI 279



 Score = 39.7 bits (91), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 42/98 (42%)

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           P +F +  ++G+     H  + + L+ +M   G+  +++T + LI  +   G    +  V
Sbjct: 10  PSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSV 69

Query: 529 FAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
           FA I   G   D I F  L K      E  KA   H K
Sbjct: 70  FANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDK 107


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 189/415 (45%), Gaps = 10/415 (2%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           PDV   N LV +LC+ G    A  V+       P    ATY A + GYCR   L+ A  +
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARVVEACG---PEATAATYGALVDGYCRAGLLEDARRV 150

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M  +    +   HN L+HALC++G + DA+  L  +L         DV+T  IL+ +
Sbjct: 151 VGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRG---CAPDVVTYNILLQA 207

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
             K     QAL L + M  +  + + V YNV+I+  C  GD+  A      +  RG  P+
Sbjct: 208 ACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPN 267

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            + YNT+L   C   +  +A      + +    P++ +   II  LC  G + K   +L 
Sbjct: 268 TVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLE 327

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M +         +N +I G    G++ +A  +   M SFG   ++ T+N ++       
Sbjct: 328 KMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSAD 387

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
              DA  L  +M  +   PD  T+N +I   C  G I  A +++ +M  +G  P+  TY+
Sbjct: 388 RWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYS 447

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
            +I G    G M++A E+  ++   G   D + +R+L +    + + DK  ++ Q
Sbjct: 448 TIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTE---SLNKEDKIEEVVQ 498



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 196/461 (42%), Gaps = 48/461 (10%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           H  +I  LC  G++  AL +   M+ +G  PDV+T+N L+   CK     +A  +I  M 
Sbjct: 166 HNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMR 225

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  TYN  I   CR  ++D+A  L +++ + G +PN V +N ++   C      
Sbjct: 226 AEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWV 285

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           DA + L E                                      M ++N   +    N
Sbjct: 286 DADEILDE--------------------------------------MVRENCPPNEATLN 307

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
           V+IN  C  G +     Y  +M K G   +V+TYN +++ +C+QG +D A      +   
Sbjct: 308 VIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSF 367

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
           G  PD ++Y T+++GLC       A E ++ M +   +P+   +N II  + + G +  A
Sbjct: 368 GCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQA 427

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGA 480
           F +   M   G + N  T++ +I   T+ G +  A  L  EM   G   D   Y +L  +
Sbjct: 428 FEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTES 486

Query: 481 SCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAID 540
                 I   +Q+  ++   GI+P  + Y  ++ G C  G    A +V A + + G   D
Sbjct: 487 LNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPD 546

Query: 541 HIPFRIL---------KKRYRRMKESDKARDIHQKWLLRNK 572
              + IL          K  R +     +RD+    L++N+
Sbjct: 547 ESTYIILIEGLFYEGYSKEARELLSRLCSRDVLSNSLIKNE 587



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 147/330 (44%), Gaps = 9/330 (2%)

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
           +LD AL L  +       P+    N LV  LC++G   DA + + E    +   AT    
Sbjct: 79  DLDAALRLVGSSPRP---PDVPLANRLVRDLCRRGRPADAARVV-EACGPEATAATYGA- 133

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
               L+D Y + G    A  +   M      +   A+N LI+  C  G ++ A      M
Sbjct: 134 ----LVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGM 189

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
           L RG  PDV+TYN LL   CK     +A      +   G  P+ ++Y  II  +C  GD+
Sbjct: 190 LCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDV 249

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
            +ARE L S+  +   P    +N ++ G+       +A  I D M+      N  T N +
Sbjct: 250 DQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVI 309

Query: 443 ILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGI 502
           I    R G +       ++M   G   +V TYN +I   C  G++  AL+L   M   G 
Sbjct: 310 INTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGC 369

Query: 503 TPDIITYTELIKGHCARGNMKEAEEVFAKI 532
            PDI+TY  ++KG C+    ++AEE+  K+
Sbjct: 370 KPDIVTYNTVLKGLCSADRWEDAEELMIKM 399



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 142/302 (47%), Gaps = 4/302 (1%)

Query: 143 KMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVN 202
           +M+++   P+  T N ++N LC+ G L+K    + +MS+   + N  TYNA I+G C   
Sbjct: 293 EMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQG 352

Query: 203 ELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVI 262
            +D AL L S M + G +P+ VT+N ++  LC      DA + + ++  +D      D  
Sbjct: 353 NVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND---RLPDNS 409

Query: 263 TSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQM 322
           T   ++  + + G   QA  ++  M +K    +   Y+ +I G    G +  A     +M
Sbjct: 410 TFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEM 469

Query: 323 LKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDI 382
             +GF  D + Y  L   L K+ K++E       L  +G++P  + Y T++ GLC +G  
Sbjct: 470 ANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKT 528

Query: 383 VKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNAL 442
             A + L  M+    +P+   + ++I+G    G    A  +   + S  V SN    N  
Sbjct: 529 DYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVLSNSLIKNEA 588

Query: 443 IL 444
           +L
Sbjct: 589 LL 590


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 219/474 (46%), Gaps = 50/474 (10%)

Query: 121 HVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS 180
           + A+I   C  G++  AL L   M      PD  T+N ++  LC     E+A+ ++REM 
Sbjct: 187 YTALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTVLKGLCCAKQWEQAEELMREMI 243

Query: 181 EMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLG 240
                PN  T+   I  +C+   LD+A+ L   M   G  P+ + ++ LV+   + G + 
Sbjct: 244 RNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVD 303

Query: 241 DAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYN 300
           +A+K L  +L   +    +  +    +   + + G+      L  +M +K+   +   ++
Sbjct: 304 EALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVGE------LIAEMVRKDCPPNDATFS 357

Query: 301 VLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKT 360
            LIN  C N  +  A     QM K G++PDV++YNT+++C   Q + D+A     +L   
Sbjct: 358 TLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDA---LKLLKSM 414

Query: 361 GVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNA 420
              PD IS+  +++ LC       A E +  ML+K        +N++ID   + G + +A
Sbjct: 415 LCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDA 474

Query: 421 FSIRDLMLSFGVSSNVFTFNALILAETRGG----------------SIF----------- 453
             + +LM  +    ++ T+++LI   +  G                 IF           
Sbjct: 475 IEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKGLCM 534

Query: 454 -----DAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIIT 508
                DA  L  +M+ +   P+  T+N+LI + C  G ++ A+ +Y++M + GITPDI T
Sbjct: 535 AARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFT 594

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK---RYRRMKESDK 559
           Y  LI G+  +G + +A +  +   T+    D I +  + K   R  R K+++K
Sbjct: 595 YNALINGYSEQGRLDDALKFLS---TMPCEPDTISYNSILKGLCRAERWKDAEK 645



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 189/414 (45%), Gaps = 38/414 (9%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           IR  C  G +  A+ L  +M + G  PDV+ ++ LVN   + G   + D  ++ ++ M  
Sbjct: 258 IRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHG---RVDEALKLLNTMLC 314

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            PN   YNA + G C     ++   L + M      PN  T + L+++LC+  L+  AV+
Sbjct: 315 RPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVE 374

Query: 245 -----------------------FLGEVLADDDGK------ATSDVITSTILMDSYFKNG 275
                                  F  +  ADD  K         D I+   ++    K  
Sbjct: 375 VLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAK 434

Query: 276 DKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYN 335
             + A+ L   M +K+ + + + +N+LI+  C NG +  A   F  M K   +PD++TY+
Sbjct: 435 RWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYS 494

Query: 336 TLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEK 395
           +L+N   +QG LDE +  + +        D  SY   ++GLC+      A E +  M+ +
Sbjct: 495 SLINGFSEQG-LDEMA--FDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTE 551

Query: 396 SVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDA 455
             +P    +N++I    + G ++ A  + + M  +G++ ++FT+NALI   +  G + DA
Sbjct: 552 DCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDA 611

Query: 456 FSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
                 M  +   PD  +YN ++   C       A +L  EMLR+  TP+ +T+
Sbjct: 612 LKFLSTMPCE---PDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 164/399 (41%), Gaps = 76/399 (19%)

Query: 201 VNELDKALHLF-----STMANNGIRPNR---VTHNILVHALCKKGLLGDAVKFLGEVLAD 252
           ++ LD AL L      ST A +   P     ++ NIL+  LC +  L DA + L  + A 
Sbjct: 86  LDNLDAALRLLLGGPSSTPATSDSAPEPPAVISCNILIKKLCARRRLADAERVLEALKAS 145

Query: 253 DDGKA------------------------------TSDVITSTILMDSYFKNG------- 275
               A                              T++V+T T L+D Y ++G       
Sbjct: 146 GAADAVSHNTLVAGYCRDGSLGDAERVVEAARASGTANVVTYTALIDGYCRSGRLADALR 205

Query: 276 ---------DKF----------------QALALWNDMFQKNIQTDIVAYNVLINGFCLNG 310
                    D +                QA  L  +M + +   + V +   I  FC NG
Sbjct: 206 LIASMPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNG 265

Query: 311 DISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYK 370
            +  A     QM K G  PDVI Y+TL+N   + G++DEA     +L+     P+ + Y 
Sbjct: 266 LLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEA---LKLLNTMLCRPNTVCYN 322

Query: 371 TIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSF 430
             ++GLCI G   +  E +  M+ K   P    ++ +I+   +   +  A  + + M  +
Sbjct: 323 AALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKY 382

Query: 431 GVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLA 490
           G   +V ++N +I   +      DA  L K ML     PD  ++N ++   C     + A
Sbjct: 383 GYMPDVVSYNTIISCFSDQARADDALKLLKSMLCK---PDTISFNAVLKCLCKAKRWYDA 439

Query: 491 LQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVF 529
           ++L  +ML++    + +T+  LI   C  G +K+A EVF
Sbjct: 440 VELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVF 478



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 120/248 (48%), Gaps = 9/248 (3%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
           AV++ LC   +   A+ L  KM++K    + +T N L++ LC+ G ++ A  V   M + 
Sbjct: 425 AVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKY 484

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
           R  P+  TY++ I G+      + A  LF +M     R +  ++N  +  LC      DA
Sbjct: 485 RCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDA 541

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
            + + +++ +D      + +T  IL+ S  + G   +A+ ++  M +  I  DI  YN L
Sbjct: 542 GELIADMVTED---CLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNAL 598

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           ING+   G +  A  +   M      PD I+YN++L  LC+  +  +A      + +   
Sbjct: 599 INGYSEQGRLDDALKFLSTMPCE---PDTISYNSILKGLCRAERWKDAEKLVTEMLRKNC 655

Query: 363 APDQISYK 370
            P+++++K
Sbjct: 656 TPNEVTFK 663



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 5/207 (2%)

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P  IS   +I+ LC    +  A E +L  L+ S   +    N ++ GY R G L +A  +
Sbjct: 114 PAVISCNILIKKLCARRRLADA-ERVLEALKASGAADAVSHNTLVAGYCRDGSLGDAERV 172

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCN 483
            +   + G ++NV T+ ALI    R G + DA  L   M    + PD +TYN ++   C 
Sbjct: 173 VEAARASG-TANVVTYTALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTVLKGLCC 228

Query: 484 LGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIP 543
                 A +L  EM+R    P+ +T+   I+  C  G +  A E+  ++   G   D I 
Sbjct: 229 AKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVII 288

Query: 544 FRILKKRYRRMKESDKARDIHQKWLLR 570
           +  L   +      D+A  +    L R
Sbjct: 289 YSTLVNGFSEHGRVDEALKLLNTMLCR 315


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 202/441 (45%), Gaps = 3/441 (0%)

Query: 128 LCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPN 187
           LC   ++ +A    + + Q+G   +    N +++  C  G + KA  V   M +    P+
Sbjct: 258 LCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPD 317

Query: 188 CATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLG 247
             +Y+  + G C+  ++    ++   MA NGI PN V+++ L+H LC+ G +  A +   
Sbjct: 318 VHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFK 377

Query: 248 EVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFC 307
            +    D     D I  +I++    ++ D      LWNDM   N   D   Y+ LI  +C
Sbjct: 378 RL---KDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYC 434

Query: 308 LNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQI 367
            +  +  A   F  M+  G  P+V+T   L++    +G + EA  F   + + GV P   
Sbjct: 435 RHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLC 494

Query: 368 SYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           +Y+ II GLC              M+++  VP+  ++++IIDG+ +  DL  AF +   M
Sbjct: 495 TYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKM 554

Query: 428 LSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHI 487
           +  G   N+FT+ +LI        + +  +L K M+ +G+ PD   Y  LI   C   ++
Sbjct: 555 VDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNM 614

Query: 488 HLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
             AL+++ EM   G++ D   YT LI G      M  A+    ++   GL    + +  L
Sbjct: 615 KAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDL 674

Query: 548 KKRYRRMKESDKARDIHQKWL 568
              Y ++ +  KA  ++   L
Sbjct: 675 IVGYFKIGDEKKAMAMYNSML 695



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 168/385 (43%), Gaps = 11/385 (2%)

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           PN ATY  ++ G C   ++  A +    +   G   N    N ++H  C  G +  A++ 
Sbjct: 246 PNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEV 305

Query: 246 LGEVLADDDGKA----TSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
                   DG        DV + +IL+D   K GD      +  +M +  I  ++V+Y+ 
Sbjct: 306 F-------DGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSS 358

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           L++G C  G +  AF  F ++  +GF  D I Y+ +L+  C+   L+     +  +    
Sbjct: 359 LLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHN 418

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
             PD  +Y ++I   C H  + +A E    M+   + P      +++ G+   G +  AF
Sbjct: 419 FVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAF 478

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
              D +  FGV  ++ T+  +I    +     D + +  +M+  G  PD   Y+++I   
Sbjct: 479 LFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGF 538

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
                +  A +LY +M+  G  P+I TYT LI G C    + E   +F  +   GLA D 
Sbjct: 539 VKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDR 598

Query: 542 IPFRILKKRYRRMKESDKARDIHQK 566
           I +  L   Y +      A +I ++
Sbjct: 599 ILYTSLIACYCKRSNMKAALEIFRE 623



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 182/378 (48%), Gaps = 5/378 (1%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N+L+  L +   +  A  +  +M    PSPN  +Y+  ++ Y    +L     L      
Sbjct: 180 NFLLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEM 239

Query: 217 --NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G+RPN  T+   ++ LC    +  A  FL ++L        +    + I    +  +
Sbjct: 240 EVEGVRPNAATYATYLYGLCHAKQVKSAWNFL-QMLCQRGYPCNNYCFNAVI--HGFCHD 296

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +A+ +++ M +     D+ +Y++L++G C  GD+ + +    +M + G  P++++Y
Sbjct: 297 GQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSY 356

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
           ++LL+ LC+ G+++ A   +  L   G   D I Y  ++ G C H D+    +    M+ 
Sbjct: 357 SSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVH 416

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
            + VP+ + ++ +I  Y R   L  A  + +LM+S G+  NV T   L+   +  G I +
Sbjct: 417 HNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGE 476

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           AF    ++   G+ P + TY ++I   C +   +    ++ +M++RG  PD + Y+ +I 
Sbjct: 477 AFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIID 536

Query: 515 GHCARGNMKEAEEVFAKI 532
           G     +++EA  ++ K+
Sbjct: 537 GFVKALDLQEAFRLYYKM 554



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 13/152 (8%)

Query: 79  NEGNPQAVFNALDLI--------LKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCL 130
           +EG    +F    LI        L E +   K M   G     L  D   + ++I   C 
Sbjct: 556 DEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEG-----LAPDRILYTSLIACYCK 610

Query: 131 GGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCAT 190
              +  AL + R+M  +G   D   +  L+    K+  ++ A   + EM     +P   T
Sbjct: 611 RSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVT 670

Query: 191 YNAFITGYCRVNELDKALHLFSTMANNGIRPN 222
           Y   I GY ++ +  KA+ ++++M   GI P+
Sbjct: 671 YTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPD 702



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 102/252 (40%), Gaps = 76/252 (30%)

Query: 369 YKTIIQGLCIHGDIVKAREFLLSMLE-KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM 427
           Y T+I+   +  ++    + L++ +E K V  E  + N ++        +  A S+ D M
Sbjct: 146 YATVIR---VFVELSMFEDALVTYVEAKKVGVELQVCNFLLKRLVEGNQIMYARSLFDDM 202

Query: 428 LSFGVSSNVFTFNALILAETRGGS--IFDAFSLKKEMLLDGIFPDVFTY----------- 474
            S G S NV++++ L+   T G    + +A  L  EM ++G+ P+  TY           
Sbjct: 203 KSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHAK 262

Query: 475 ------------------------NLLIGASCNLGHIHLALQLYD--------------- 495
                                   N +I   C+ G +H A++++D               
Sbjct: 263 QVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYS 322

Query: 496 --------------------EMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
                               EM R GITP++++Y+ L+ G C  G ++ A E+F +++  
Sbjct: 323 ILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQ 382

Query: 536 GLAIDHIPFRIL 547
           G   DHI + I+
Sbjct: 383 GFKHDHIVYSIV 394


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 215/448 (47%), Gaps = 15/448 (3%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           VI+ LC  G +  A+ + R M  +  V D  T++ L++ LC  G +++A  ++ EM    
Sbjct: 181 VIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 240

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             PN   +N  I+  C+  +L +A  L   M   G  PN VT+N LVH LC KG L  A+
Sbjct: 241 TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 300

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
             L  ++A+   K   + IT   L+D + K+G     + +   + +K  + +  +Y+ LI
Sbjct: 301 SLLNRMVAN---KCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLI 357

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVA 363
           +G    G        + +M+++G  P+ I Y+ L++ LC++GK DEA  +   +   G  
Sbjct: 358 SGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHT 417

Query: 364 PDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           P+  +Y +++ G    GDI KA      M +         ++++I+G  + G L  A  +
Sbjct: 418 PNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIV 477

Query: 424 RDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG--IFPDVFTYNLLIGAS 481
              MLS G+  +V  ++++I        +     L  +ML     + PDV TYN+L+ A 
Sbjct: 478 WKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAF 537

Query: 482 CNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDH 541
           C    +  A+ + + ML +G  PD IT    +K    R NM   ++           +D 
Sbjct: 538 CTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKT--LRDNMDPPQDGRE-------FLDE 588

Query: 542 IPFRILKKRYRRMKESDKARDIHQKWLL 569
           +  R++ KR R +  S+    + QK+LL
Sbjct: 589 LVVRLI-KRQRTVGASNIIEVMLQKFLL 615



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 198/423 (46%), Gaps = 6/423 (1%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P+ L+ N ++  LC++G++++A  V R MS+     +  TY+  + G C    +D+A+ L
Sbjct: 173 PNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSL 232

Query: 211 FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDS 270
              M   G  PN V  N+L+ ALCKKG L  A K +  +          + +T   L+  
Sbjct: 233 LDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKG---CVPNEVTYNSLVHG 289

Query: 271 YFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPD 330
               G   +A++L N M       + + +  L++GF  +G           + ++G+  +
Sbjct: 290 LCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGN 349

Query: 331 VITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
             +Y++L++ L K+GK +     +  + + G  P+ I Y  +I GLC  G   +A+E+L+
Sbjct: 350 EFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLI 409

Query: 391 SMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGG 450
            M  K   P    ++ ++ GY   GD+  A  +   M     + +   ++ LI    + G
Sbjct: 410 EMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNG 469

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML--RRGITPDIIT 508
            + +A  + K+ML  GI  DV  Y+ +I   CN   +   ++L+++ML     + PD++T
Sbjct: 470 KLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVT 529

Query: 509 YTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR-RMKESDKARDIHQKW 567
           Y  L+   C + ++  A ++   +   G   D I   I  K  R  M      R+   + 
Sbjct: 530 YNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDEL 589

Query: 568 LLR 570
           ++R
Sbjct: 590 VVR 592



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 193/409 (47%), Gaps = 5/409 (1%)

Query: 157 NYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMAN 216
           N ++ E C    LE  +HVI   S     PN  ++N  I   CRV  +D+A+ +F  M++
Sbjct: 144 NVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSD 203

Query: 217 NGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGD 276
                +  T++ L+H LC +G + +AV  L E+  +       + +   +L+ +  K GD
Sbjct: 204 RNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG---TFPNPVAFNVLISALCKKGD 260

Query: 277 KFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNT 336
             +A  L ++MF K    + V YN L++G CL G +  A +   +M+    +P+ IT+ T
Sbjct: 261 LSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGT 320

Query: 337 LLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKS 396
           L++   K G+  +       L + G   ++ SY ++I GL   G      +    M+EK 
Sbjct: 321 LVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKG 380

Query: 397 VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAF 456
             P   +++ +IDG  R G    A      M + G + N FT+++L+      G I  A 
Sbjct: 381 CKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAI 440

Query: 457 SLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGH 516
            + KEM  +        Y++LI   C  G +  AL ++ +ML RGI  D++ Y+ +I G 
Sbjct: 441 LVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGF 500

Query: 517 CARGNMKEAEEVFAKI--QTLGLAIDHIPFRILKKRYRRMKESDKARDI 563
           C    +++  ++F ++      L  D + + IL   +       +A DI
Sbjct: 501 CNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDI 549



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 158/323 (48%), Gaps = 9/323 (2%)

Query: 82  NPQAVFNAL--DLILKENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALW 139
           NP A FN L   L  K +L R   + D   ++  +  +   + +++  LCL GK+  A+ 
Sbjct: 244 NPVA-FNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYN-SLVHGLCLKGKLDKAMS 301

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L  +M+    VP+ +T   LV+   K G       V+  + E     N  +Y++ I+G  
Sbjct: 302 LLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLF 361

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           +  + +  + L+  M   G +PN + ++ L+  LC++G   +A ++L E+    +   T 
Sbjct: 362 KEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEM---KNKGHTP 418

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYF 319
           +  T + LM  YF+ GD  +A+ +W +M   +     V Y++LING C NG +  A   +
Sbjct: 419 NSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVW 478

Query: 320 CQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVL--SKTGVAPDQISYKTIIQGLC 377
            QML RG   DV+ Y+++++  C    +++    +  +      + PD ++Y  ++   C
Sbjct: 479 KQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFC 538

Query: 378 IHGDIVKAREFLLSMLEKSVVPE 400
               + +A + L +ML++   P+
Sbjct: 539 TKNSVSRAIDILNTMLDQGCDPD 561



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 131/301 (43%), Gaps = 63/301 (20%)

Query: 132 GKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATY 191
           G+ G  LW  ++M++KG  P+ + ++ L++ LC+ G  ++A   + EM     +PN  TY
Sbjct: 366 GEHGMQLW--KEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTY 423

Query: 192 NAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLA 251
           ++ + GY    ++ KA+ ++  M +N    + V ++IL++ LCK G L            
Sbjct: 424 SSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLK----------- 472

Query: 252 DDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGD 311
                                      +AL +W  M  + I+ D+VAY+ +I+GFC    
Sbjct: 473 ---------------------------EALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQL 505

Query: 312 ISSAFAYFCQML--KRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISY 369
           +      F QML       PDV+TYN LLN  C +  +  A      +   G  PD I+ 
Sbjct: 506 VEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITC 565

Query: 370 KTIIQGLCIHGDIVK-AREFLLS--------------------MLEKSVVPEPHIWNVII 408
              ++ L  + D  +  REFL                      ML+K ++P+P  W + +
Sbjct: 566 DIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAV 625

Query: 409 D 409
            
Sbjct: 626 Q 626



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 143/344 (41%), Gaps = 46/344 (13%)

Query: 266 ILMDSYFKNGDKFQALALWNDMFQK-NIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
           I+  +Y K     +AL L++ M  + + +  + ++N ++N     G    A  ++  ++ 
Sbjct: 105 IMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVID 164

Query: 325 RGFL----PDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHG 380
                   P+ +++N ++  LC+ G +D+A   +  +S      D  +Y T++ GLC  G
Sbjct: 165 SNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEG 224

Query: 381 DIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFN 440
            I +A   L  M  +   P P  +NV+I    + GDLS A  + D M   G   N  T+N
Sbjct: 225 RIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYN 284

Query: 441 ALILAETRGGSIFDAFSLKKEMLLDGIFP------------------------------- 469
           +L+      G +  A SL   M+ +   P                               
Sbjct: 285 SLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEK 344

Query: 470 ----DVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEA 525
               + F+Y+ LI      G     +QL+ EM+ +G  P+ I Y+ LI G C  G   EA
Sbjct: 345 GYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEA 404

Query: 526 EEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQKWLL 569
           +E   +++  G   +   +  L   Y       +A DIH+  L+
Sbjct: 405 KEYLIEMKNKGHTPNSFTYSSLMWGYF------EAGDIHKAILV 442


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 196/439 (44%), Gaps = 39/439 (8%)

Query: 109 PVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGD 168
           P+R  + T +  + A++  LC  G +  A+ +   M   G  PD   +  +V+ LC  G 
Sbjct: 134 PLRGCVRTAFT-YTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGR 192

Query: 169 LEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNI 228
             +A+ ++ +       PN   YNA I GYC V +L+ A+ +F  M  NG  PN  T+  
Sbjct: 193 TREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTE 252

Query: 229 LVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMF 288
           L+   CK   L                                       +A+ L++ M 
Sbjct: 253 LISGFCKSRKLD--------------------------------------RAMMLFSRMV 274

Query: 289 QKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLD 348
              +  ++V Y  LI G C +G +  A+     M   G +P+  T + L++ LCK  ++ 
Sbjct: 275 DAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVG 334

Query: 349 EASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII 408
           EA    G L + G+  ++I Y ++I GLC  G    A   + +++ +  VP+ H ++ +I
Sbjct: 335 EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394

Query: 409 DGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIF 468
           DG  R  +LS A  + D M+  GV  +  T+  +I    R      +  +  +M+  GI 
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIK 454

Query: 469 PDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEV 528
           PDVFTY + + + C+ G +  A  +   M+  G+ P+++TY  LI G+   G   +A   
Sbjct: 455 PDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFST 514

Query: 529 FAKIQTLGLAIDHIPFRIL 547
           F  +   G   +   + +L
Sbjct: 515 FKHMVANGCKPNEESYTVL 533



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 214/517 (41%), Gaps = 89/517 (17%)

Query: 117 DYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVI 176
           D   +  ++  LC  G+   A  L    + +G  P+V+ +N L++  C +GDLE A  V 
Sbjct: 176 DPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVF 235

Query: 177 REMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKK 236
             M     SPN  TY   I+G+C+  +LD+A+ LFS M + G+ PN VT+  L+   C  
Sbjct: 236 ERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSD 295

Query: 237 GLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDI 296
           G L  A + L  +   ++     +  T ++L+D+  K+    +A  L   + QK I+ + 
Sbjct: 296 GQLDCAYRLLQSM---ENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNE 352

Query: 297 VAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGV 356
           + Y  LI+G C  G  ++A      ++ +GF+PD  TY++L++ LC+Q +L EA      
Sbjct: 353 IVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDD 412

Query: 357 LSKTGVAPDQISYKTIIQGL-----------------------------------CIHGD 381
           + + GV P  ++Y  II  L                                   C  G 
Sbjct: 413 MMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGR 472

Query: 382 IVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS------------------- 422
           +  A   +L M++  V P    +N +I GY   G  S AFS                   
Sbjct: 473 MEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTV 532

Query: 423 --------------------------------IRDLMLSFGVSSNVFTFNALILAETRGG 450
                                           + + M+   + S +  +N  + +  R  
Sbjct: 533 LLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVD 592

Query: 451 SIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYT 510
            + +A  L  EM    + P    Y  +I   C L  +  AL   D M++ G  P + +Y 
Sbjct: 593 RLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYR 652

Query: 511 ELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            +I   C  G+++ A++VF  + +     + I +RIL
Sbjct: 653 HIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRIL 689



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 187/407 (45%), Gaps = 6/407 (1%)

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T+  L+N  C  GDL  +   +  +     +P+   Y +F+ GYCR   L  A  LF  M
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
              G      T+  L+H LC  G++ +A+     + AD  G A    + +T ++      
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQAD--GCAPDPHVYAT-MVHGLCGA 190

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +A  L +D   +  + ++V YN LI+G+C  GD+  A   F +M   G  P+V TY
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLE 394
             L++  CK  KLD A   +  +   G+ P+ ++Y  +IQG C  G +  A   L SM  
Sbjct: 251 TELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMEN 310

Query: 395 KSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFD 454
             +VP     +V+ID   +   +  A  +   ++  G+  N   + +LI    + G    
Sbjct: 311 SGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAA 370

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
           A  L + ++  G  PD  TY+ LI   C    +  A+ + D+M+ +G+ P  +TYT +I 
Sbjct: 371 ADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIID 430

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRY---RRMKESD 558
                     ++++  K+   G+  D   + I  + Y    RM++++
Sbjct: 431 ELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAE 477



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 202/442 (45%), Gaps = 3/442 (0%)

Query: 119 RRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIRE 178
           R +  +I   CL G +  +      +++ G  PD   +   V   C+ G L  A  +   
Sbjct: 73  RTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVL 132

Query: 179 MSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGL 238
           M          TY A + G C    + +A+ +F+ M  +G  P+   +  +VH LC  G 
Sbjct: 133 MPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGR 192

Query: 239 LGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVA 298
             +A   L + +A+       +V+    L+D Y   GD   A+ ++  M       ++  
Sbjct: 193 TREAETLLSDAMAEG---FEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRT 249

Query: 299 YNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLS 358
           Y  LI+GFC +  +  A   F +M+  G +P+V+TY  L+   C  G+LD A      + 
Sbjct: 250 YTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSME 309

Query: 359 KTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLS 418
            +G+ P++ +   +I  LC H  + +A+  L S+++K +     ++  +IDG  + G  +
Sbjct: 310 NSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFA 369

Query: 419 NAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLI 478
            A  +   ++S G   +  T+++LI    R   + +A  +  +M+  G+ P   TY ++I
Sbjct: 370 AADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIII 429

Query: 479 GASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLA 538
                      + ++ D+M+  GI PD+ TYT  ++ +C  G M++AE +   +   G+ 
Sbjct: 430 DELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVC 489

Query: 539 IDHIPFRILKKRYRRMKESDKA 560
            + + +  L   Y  +  + +A
Sbjct: 490 PNLVTYNALICGYANLGLTSQA 511



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 141/321 (43%), Gaps = 7/321 (2%)

Query: 227 NILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWND 286
           N  + AL +  +L D   F   + A        ++ T T L+++Y   GD   +    + 
Sbjct: 45  NAFLMALARHRMLADMESFASRMPA-------RNLRTYTTLINAYCLAGDLPASKRHLSS 97

Query: 287 MFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGK 346
           + +     D  AY   + G+C  G ++ A   F  M  RG +    TY  LL+ LC  G 
Sbjct: 98  LLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGM 157

Query: 347 LDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNV 406
           + EA   +  +   G APD   Y T++ GLC  G   +A   L   + +   P   ++N 
Sbjct: 158 VREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNA 217

Query: 407 IIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDG 466
           +IDGY   GDL  A  + + M   G S NV T+  LI    +   +  A  L   M+  G
Sbjct: 218 LIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAG 277

Query: 467 IFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAE 526
           + P+V TY  LI   C+ G +  A +L   M   G+ P+  T + LI   C    + EA+
Sbjct: 278 LVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQ 337

Query: 527 EVFAKIQTLGLAIDHIPFRIL 547
            +   +   G+ ++ I +  L
Sbjct: 338 LLLGSLIQKGIKVNEIVYTSL 358



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 179/426 (42%), Gaps = 54/426 (12%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I  LC   ++G A  L   +IQKG   + + +  L++ LCK G    AD +++ +    
Sbjct: 323 LIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQG 382

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+  TY++ I G CR  EL +A+ +   M   G++P+ VT+ I++  L ++     + 
Sbjct: 383 FVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSK 442

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
           K L +++A        DV T TI + SY   G    A  +   M    +  ++V YN LI
Sbjct: 443 KILDKMIA---AGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALI 499

Query: 304 NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG-------------KLDEA 350
            G+   G  S AF+ F  M+  G  P+  +Y  LL  L K+              K+ E 
Sbjct: 500 CGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEM 559

Query: 351 SHFYGVLSKTG--VAPDQIS-YKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVI 407
            + +G+L +      P +I  Y   +  LC    + +A+  L+ M   ++ P   ++  I
Sbjct: 560 KYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSI 619

Query: 408 IDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGI 467
           I    R   L+ A +  D                                    M+  G 
Sbjct: 620 IACCCRLKMLTEALTFVD-----------------------------------SMVKSGY 644

Query: 468 FPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE 527
            P + +Y  +I + C  G I  A Q++ +ML +    + I +  LI G   +G + E   
Sbjct: 645 IPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSS 704

Query: 528 VFAKIQ 533
           + + ++
Sbjct: 705 LLSVME 710



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/173 (20%), Positives = 78/173 (45%), Gaps = 3/173 (1%)

Query: 165 KIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRV 224
           KI +++    ++ EM +++       YN F+T  CRV+ LD+A  L   M +  + P+  
Sbjct: 555 KIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSED 614

Query: 225 THNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALW 284
            +  ++   C+  +L +A+ F+  ++          + +   ++ S  + G    A  ++
Sbjct: 615 VYTSIIACCCRLKMLTEALTFVDSMV---KSGYIPQLESYRHIISSLCEEGSIQTAKQVF 671

Query: 285 NDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTL 337
            DM  K    + +A+ +LI+G    G ++   +    M ++ + P    Y  L
Sbjct: 672 GDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARL 724



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 3/173 (1%)

Query: 140 LRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYC 199
           L  +M++     ++  +N  +  LC++  L++A  ++ EM     +P+   Y + I   C
Sbjct: 565 LLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCC 624

Query: 200 RVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATS 259
           R+  L +AL    +M  +G  P   ++  ++ +LC++G +  A +  G++L+ +      
Sbjct: 625 RLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKE---YNY 681

Query: 260 DVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDI 312
           + I   IL+D   + G   +  +L + M +KN +     Y  L        DI
Sbjct: 682 EEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDANDI 734


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 237/508 (46%), Gaps = 13/508 (2%)

Query: 71  WFSNKDSDNEGNPQAVFNALDLILKENLDR-----LKTMRDTGPVRCTLETDYRRHVAVI 125
           +++++      +P   ++ L+++ K  L +     L  M+  G  R T E   R  V+  
Sbjct: 195 YWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYR-TPEAFSRVMVSYS 253

Query: 126 RDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPS 185
           R     G++  AL +   M + G  P++L  N  ++   +   LEKA   +  M  +   
Sbjct: 254 R----AGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIV 309

Query: 186 PNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKF 245
           PN  TYN  I GYC ++ +++A+ L   M + G  P++V++  ++  LCK+  + + V+ 
Sbjct: 310 PNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVE-VRD 368

Query: 246 LGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLING 305
           L + +A + G    D +T   L+    K+    +AL    D  +K  + D + Y+ +++ 
Sbjct: 369 LMKKMAKEHG-LVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHA 427

Query: 306 FCLNGDISSAFAYFCQMLKRGFLP-DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
            C  G +S A     +ML +G  P DV+TY  ++N  C+ G++D+A     V+   G  P
Sbjct: 428 LCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKP 487

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIR 424
           + +SY  ++ G+C  G  ++ARE +    E    P    ++VI+ G  R G LS A  + 
Sbjct: 488 NTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVV 547

Query: 425 DLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNL 484
             M+  G        N L+ +  R G   +A    +E L  G   +V  +  +I   C  
Sbjct: 548 REMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQN 607

Query: 485 GHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPF 544
             +  AL + D+M       D+ TYT L+     +G + EA E+  K+   G+    + +
Sbjct: 608 DELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTY 667

Query: 545 RILKKRYRRMKESDKARDIHQKWLLRNK 572
           R +  RY +M + D    I +K + R K
Sbjct: 668 RTVIHRYCQMGKVDDLVAILEKMISRQK 695



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 118/495 (23%), Positives = 208/495 (42%), Gaps = 75/495 (15%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMS-EM 182
           +IR  C   ++  A+ L   M  KG +PD +++  ++  LCK   + +   ++++M+ E 
Sbjct: 318 MIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEH 377

Query: 183 RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDA 242
              P+  TYN  I    + +  D+AL         G R +++ ++ +VHALCK+G + +A
Sbjct: 378 GLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEA 437

Query: 243 VKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVL 302
              + E+L+   G    DV+T T +++ + + G+  +A  L   M     + + V+Y  L
Sbjct: 438 KDLINEMLSK--GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTAL 495

Query: 303 INGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGV 362
           +NG C  G    A        +  + P+ ITY+ +++ L ++GKL EA      +   G 
Sbjct: 496 LNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGF 555

Query: 363 APDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFS 422
            P  +    ++Q LC  G   +AR+F+   L K        +  +I G+ +  +L  A S
Sbjct: 556 FPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALS 615

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTY-------- 474
           + D M      ++VFT+  L+    + G I +A  L K+ML  GI P   TY        
Sbjct: 616 VLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYC 675

Query: 475 -------------------------NLLIGASCNLGHIHLALQLYDEMLR---------- 499
                                    N +I   C LG +  A  L  ++LR          
Sbjct: 676 QMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTC 735

Query: 500 -------------------------RGITPDIITYTELIKGHCARGNMKEAEEVFAKIQT 534
                                    R + PD+    +L K    +G + EA+++  ++  
Sbjct: 736 YALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVE 795

Query: 535 LGLAIDHIPFRILKK 549
            G    HI  + LK+
Sbjct: 796 RG----HISPQSLKQ 806



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/335 (22%), Positives = 155/335 (46%), Gaps = 37/335 (11%)

Query: 123 AVIRDLCLGGKIGTALWLRRKMIQKGTVP-DVLTHNYLVNELCKIGDLEKADHVIREMSE 181
           A++  LC  G++  A  L  +M+ KG  P DV+T+  +VN  C++G+++KA  +++ M  
Sbjct: 423 AIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHT 482

Query: 182 MRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGD 241
               PN  +Y A + G CR  +  +A  + +    +   PN +T+++++H L ++G L +
Sbjct: 483 HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSE 542

Query: 242 AVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNV 301
           A   + E++         ++    +L+ S  ++G   +A     +   K    ++V +  
Sbjct: 543 ACDVVREMVLKGFFPGPVEI---NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTT 599

Query: 302 LINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
           +I+GFC N ++ +A +    M       DV TY TL++ L K+G++ EA+     +   G
Sbjct: 600 VIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKG 659

Query: 362 VAPDQISYKTII---------------------------------QGLCIHGDIVKAREF 388
           + P  ++Y+T+I                                 + LC+ G + +A   
Sbjct: 660 IDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTL 719

Query: 389 LLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSI 423
           L  +L  +   +      +++GY + G   +A+ +
Sbjct: 720 LGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKV 754


>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
 gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
          Length = 461

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 184/380 (48%), Gaps = 2/380 (0%)

Query: 151 PDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHL 210
           P++ T++ L+   C+ G L+     +  + +        T+   + G C       A+ +
Sbjct: 82  PNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDI 141

Query: 211 -FSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMD 269
               M   G  PN  +  IL+  LC +    +A++ L +++ DD G    DV+    +++
Sbjct: 142 VLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELL-QMMPDDGGDCPPDVVLYNTVIN 200

Query: 270 SYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLP 329
            +FK GD  +A A +++MF + I  D+V Y+ +I   C    +  A      M+K G +P
Sbjct: 201 GFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 260

Query: 330 DVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFL 389
           +  TYN++++  C  G+L EA  F  ++   GV PD ++   ++  LC +    +AR+  
Sbjct: 261 NCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIF 320

Query: 390 LSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALILAETRG 449
            SM +  + P+   +  ++ GY   G L     + DLM+  G+  N   FN LI A  + 
Sbjct: 321 NSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQ 380

Query: 450 GSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITY 509
             + +A  +  +M   G+ P+   Y  +I   C LG ++ A+    +M+  G+TPDII Y
Sbjct: 381 EKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTPDIIVY 440

Query: 510 TELIKGHCARGNMKEAEEVF 529
           T LI G C     ++AEE+ 
Sbjct: 441 TPLIHGFCTCDKWEKAEELI 460



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 142/315 (45%), Gaps = 40/315 (12%)

Query: 143 KMIQKGTV-------------------------------------PDVLTHNYLVNELCK 165
           +M Q G +                                     PDV+ +N ++N   K
Sbjct: 145 RMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVINGFFK 204

Query: 166 IGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVT 225
            GD +KA     EM +    P+  TY++ I   C+   +DKA+ + +TM  NG+ PN  T
Sbjct: 205 EGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRT 264

Query: 226 HNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWN 285
           +N +VH  C  G L +A+ FL  + +D       DV+T  +LMD   KN    +A  ++N
Sbjct: 265 YNSIVHGYCSSGQLTEAIGFLKMMCSDG---VEPDVVTCNLLMDYLCKNRRCTEARKIFN 321

Query: 286 DMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQG 345
            M +  ++ DI  Y  L+ G+   G +         M+  G  P+   +N L+    KQ 
Sbjct: 322 SMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQE 381

Query: 346 KLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWN 405
           K+DEA   +  + + G++P+ ++Y+T+I  LC  G +  A   L  M+ + + P+  ++ 
Sbjct: 382 KVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTPDIIVYT 441

Query: 406 VIIDGYGRCGDLSNA 420
            +I G+  C     A
Sbjct: 442 PLIHGFCTCDKWEKA 456



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 135/296 (45%), Gaps = 6/296 (2%)

Query: 95  KENLDRLKTMRDTGPVRCTLETDYRRHVAVIRDLCLGGKIGTALWLRRKMIQKGTVPDVL 154
           +E L+ L+ M D G        D   +  VI      G    A     +M  +G +PDV+
Sbjct: 172 QEALELLQMMPDDGG---DCPPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVV 228

Query: 155 THNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTM 214
           T++ ++  LCK   ++KA  V+  M +    PNC TYN+ + GYC   +L +A+     M
Sbjct: 229 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMM 288

Query: 215 ANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKN 274
            ++G+ P+ VT N+L+  LCK     +A K    +          D+ T   L+  Y   
Sbjct: 289 CSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFNSM---TKCGLKPDITTYCTLLQGYATK 345

Query: 275 GDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITY 334
           G   +   L + M    IQ +   +N+LI  +     +  A   F +M ++G  P+ + Y
Sbjct: 346 GALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNY 405

Query: 335 NTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLL 390
            T+++ LCK G++ +A      +   G+ PD I Y  +I G C      KA E + 
Sbjct: 406 RTVIDVLCKLGRVYDAVLTLKQMINEGLTPDIIVYTPLIHGFCTCDKWEKAEELIF 461



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 147/314 (46%), Gaps = 3/314 (0%)

Query: 256 KATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSA 315
           + T ++ T ++L+    + G      A   ++ +K  + + + +  L+ G C +   S A
Sbjct: 79  EVTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDA 138

Query: 316 F-AYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG--VAPDQISYKTI 372
                C+M + G +P+V +   LL  LC + +  EA     ++   G    PD + Y T+
Sbjct: 139 MDIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTV 198

Query: 373 IQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGV 432
           I G    GD  KA      M ++ ++P+   ++ II    +   +  A  + + M+  GV
Sbjct: 199 INGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 258

Query: 433 SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
             N  T+N+++      G + +A    K M  DG+ PDV T NLL+   C       A +
Sbjct: 259 MPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARK 318

Query: 493 LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
           +++ M + G+ PDI TY  L++G+  +G + E  ++   +   G+  +H  F IL   Y 
Sbjct: 319 IFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYA 378

Query: 553 RMKESDKARDIHQK 566
           + ++ D+A  +  K
Sbjct: 379 KQEKVDEAMLVFSK 392



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 3/151 (1%)

Query: 418 SNAFSIRDLMLSFGVSSNVFTFNALI--LAETRGGSIFDAFSLKKEMLLDGIFPDVFTYN 475
            +A  + D +L  G  + ++  N  +  +A     +    ++       D + P+++TY+
Sbjct: 29  EDARHVFDELLRRGKGATIYGLNRALDDVARHSPAAAVSRYNRMARAGADEVTPNLYTYS 88

Query: 476 LLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEE-VFAKIQT 534
           +LIG  C  G + L       ++++G   + IT+T L+KG CA     +A + V  ++  
Sbjct: 89  VLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLCRMTQ 148

Query: 535 LGLAIDHIPFRILKKRYRRMKESDKARDIHQ 565
           LG   +     IL K       S +A ++ Q
Sbjct: 149 LGCIPNVFSCTILLKGLCDENRSQEALELLQ 179


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 179/380 (47%), Gaps = 5/380 (1%)

Query: 124 VIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMR 183
           +I   C    I  AL   R+M + G  P    ++ +V   CK G++ KA  V  EM    
Sbjct: 104 IIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKG 163

Query: 184 PSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAV 243
             P+   +N  ++G  R  ++ +A  LF +M + G +P+ VT+N ++  LCK   L +AV
Sbjct: 164 CEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAV 223

Query: 244 KFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLI 303
            FL E +  +D   T   +T T L+D   K     QA  ++  M +        AY+VLI
Sbjct: 224 -FLLERMKQEDVSPT--FVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLI 280

Query: 304 --NGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTG 361
             NG C       A   F +M  RG  P V+TYNTLL  L    KL +A      +    
Sbjct: 281 LINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQV 340

Query: 362 VAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAF 421
            AP+  +Y+ +I  LC    + +A + L +M +K  VP   IW V++    R G L +AF
Sbjct: 341 PAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAF 400

Query: 422 SIRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGAS 481
            +   M        V + N L+    R GS+ +A    K+M   GI PD FTY+ L+   
Sbjct: 401 ELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGL 460

Query: 482 CNLGHIHLALQLYDEMLRRG 501
           C  G    A +L +E++R G
Sbjct: 461 CWQGKADQARKLVEELVRDG 480



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 188/413 (45%), Gaps = 6/413 (1%)

Query: 125 IRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRP 184
           IR L     +  A  +  +M   G  PDV +H  L+    K G  ++    +  M E   
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 185 SPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVK 244
            PN   YN  I+  C+   L +A      M  +   PN V++NI++   CK   +  A+ 
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 245 FLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLIN 304
           FL E+  ++ G   +    S+I+  S+ K G+  +A+ ++ +M  K  + DIV +NVL++
Sbjct: 120 FLREM--EELGHPPTPHAYSSIV-QSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLS 176

Query: 305 GFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAP 364
           G      I  A   F  M  RG  PDV+TYNT++  LCK  KLDEA      + +  V+P
Sbjct: 177 GLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSP 236

Query: 365 DQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVPEPHIWNVII--DGYGRCGDLSNAFS 422
             ++Y T+I  LC    + +A E    M E         ++V+I  +G  +      A  
Sbjct: 237 TFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKE 296

Query: 423 IRDLMLSFGVSSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASC 482
           +   M   G+S  V T+N L+        + DA  L   ML     P++FTY +LI + C
Sbjct: 297 MFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLC 356

Query: 483 NLGHIHLALQLYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTL 535
               +  A +L   M  +G  P +  +  L+      G + +A E++ ++  +
Sbjct: 357 KTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRI 409



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 188/412 (45%), Gaps = 12/412 (2%)

Query: 160 VNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGI 219
           + +L +   + +A+ ++ EM     SP+  ++   I G+ +     +       M   G+
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 220 RPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTILMDSYFKNGDKFQ 279
            PN + +N L+  LCK G+L +A  +L  +          +V++  I++D Y K  +  +
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRM----PQHCAPNVVSYNIIIDGYCKARNIEK 116

Query: 280 ALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAYFCQMLKRGFLPDVITYNTLLN 339
           ALA   +M +        AY+ ++  FC  G++S A   F +M  +G  PD++ +N LL+
Sbjct: 117 ALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLS 176

Query: 340 CLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVKAREFLLSMLEKSVVP 399
            L +  K+ EA   +  ++  G  PD ++Y T+I GLC    + +A   L  M ++ V P
Sbjct: 177 GLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSP 236

Query: 400 EPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL-----AETRGGSIFD 454
               +  +ID   +   L  A+ + + M           ++ LIL        R G   +
Sbjct: 237 TFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKE 296

Query: 455 AFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITPDIITYTELIK 514
            F   +EM   GI P V TYN L+    +   +  A++L   ML +   P++ TY  LI 
Sbjct: 297 MF---QEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILIS 353

Query: 515 GHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYRRMKESDKARDIHQK 566
             C    ++EA ++ + ++  G       + +L  R  R    D A +++++
Sbjct: 354 SLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKE 405


>gi|414882131|tpg|DAA59262.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1604

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 179/361 (49%), Gaps = 8/361 (2%)

Query: 142  RKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEMRPSPNCATYNAFITGYCRV 201
            R+M   G  PDV   N ++  L      +    V  EM E+   P+  TYN  +  + + 
Sbjct: 1073 REMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKE 1132

Query: 202  NELDKALHLFSTMAN--NGIRPNRVTHNILVHALCKKGLLGDAVKFL-GEVLADDDGKAT 258
               DK   L   M    +G  PN VT+N+++  L +KG L +A + + G  L+    KA+
Sbjct: 1133 GRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK---KAS 1189

Query: 259  SDVITSTILMDSYFKNGDKFQALALWNDMFQKNIQTDIVAYNVLINGFCLNGDISSAFAY 318
            S   T   L+      G   +   L  +M  + I   +V YN +I+G   +G + +A   
Sbjct: 1190 S--FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 1247

Query: 319  FCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCI 378
            F +M   G LPDVITYN+LLN  CK G L EA   +G L + G+AP  ++Y  +I G C 
Sbjct: 1248 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 1307

Query: 379  HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
             GD+ +AR     M E+  +P    + +++ G      L+ A    D MLS G+  + F 
Sbjct: 1308 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFA 1367

Query: 439  FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
            +N  I AE   G I  AF L++ ++L+GI  D  TYN+LI   C  G++  A +L  +M+
Sbjct: 1368 YNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMV 1427

Query: 499  R 499
            R
Sbjct: 1428 R 1428



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 158/343 (46%), Gaps = 8/343 (2%)

Query: 208  LHLFSTMANNGIRPNRVTHNILVHALCKKGLLGDAVKFLGEVLADDDGKATSDVITSTIL 267
            L  F  MA++G+ P+    N ++  L       D      E+L   +      ++T   L
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEML---ELGIEPSIVTYNTL 1125

Query: 268  MDSYFKNGDKFQALALWNDMFQKN---IQTDIVAYNVLINGFCLNGDISSAFAYFCQMLK 324
            +DS+ K G K +   L  +M  +    +  D V YNV+I G    GD+  A A   + ++
Sbjct: 1126 LDSFLKEGRKDKVAMLLKEMETRGSGCLPND-VTYNVVITGLTRKGDLEEA-AELVEGMR 1183

Query: 325  RGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQGLCIHGDIVK 384
                    TYN L+  L  +G + +       +   G+ P  ++Y  +I GL   G +  
Sbjct: 1184 LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEA 1243

Query: 385  AREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFTFNALIL 444
            A+     M    ++P+   +N +++GY + G+L  A  +   +   G++  V T+N LI 
Sbjct: 1244 AQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILID 1303

Query: 445  AETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEMLRRGITP 504
               R G + +A  LK+EM   G  P+V TY +L+  S N+  + +A + +DEML +G+ P
Sbjct: 1304 GYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQP 1363

Query: 505  DIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRIL 547
            D   Y   I      G++  A E+   +   G++ D + + IL
Sbjct: 1364 DCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNIL 1406



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 122/254 (48%), Gaps = 5/254 (1%)

Query: 316  FAYFCQMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSKTGVAPDQISYKTIIQG 375
             + F +M   G  PDV   N +L  L    + D+    +  + + G+ P  ++Y T++  
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128

Query: 376  LCIHGDIVKAREFLLSMLEKS--VVPEPHIWNVIIDGYGRCGDLSNAFSIRDLM-LSFGV 432
                G   K    L  M  +    +P    +NV+I G  R GDL  A  + + M LS   
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 1188

Query: 433  SSNVFTFNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQ 492
            SS  FT+N LI      G +   + L+ EM  +GI P V TYN +I      G +  A  
Sbjct: 1189 SS--FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQV 1246

Query: 493  LYDEMLRRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKKRYR 552
             + EM   G+ PD+ITY  L+ G+C  GN+KEA  +F  ++  GLA   + + IL   Y 
Sbjct: 1247 KFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYC 1306

Query: 553  RMKESDKARDIHQK 566
            R+ + ++AR + ++
Sbjct: 1307 RLGDLEEARILKEE 1320



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 119/231 (51%), Gaps = 3/231 (1%)

Query: 321  QMLKRGFLPDVITYNTLLNCLCKQGKLDEASHFYGVLSK--TGVAPDQISYKTIIQGLCI 378
            +ML+ G  P ++TYNTLL+   K+G+ D+ +     +    +G  P+ ++Y  +I GL  
Sbjct: 1109 EMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTR 1168

Query: 379  HGDIVKAREFLLSMLEKSVVPEPHIWNVIIDGYGRCGDLSNAFSIRDLMLSFGVSSNVFT 438
             GD+ +A E L+  +  S       +N +I G    G +   + ++  M + G+   V T
Sbjct: 1169 KGDLEEAAE-LVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVT 1227

Query: 439  FNALILAETRGGSIFDAFSLKKEMLLDGIFPDVFTYNLLIGASCNLGHIHLALQLYDEML 498
            +NA+I    + G +  A     EM   G+ PDV TYN L+   C  G++  AL L+ ++ 
Sbjct: 1228 YNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR 1287

Query: 499  RRGITPDIITYTELIKGHCARGNMKEAEEVFAKIQTLGLAIDHIPFRILKK 549
            R G+ P ++TY  LI G+C  G+++EA  +  ++   G   +   + IL K
Sbjct: 1288 RAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMK 1338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 71/166 (42%), Gaps = 35/166 (21%)

Query: 123  AVIRDLCLGGKIGTALWLRRKMIQKGTVPDVLTHNYLVNELCKIGDLEKADHVIREMSEM 182
            +++   C  G +  AL L   + + G  P VLT+N L++  C++GDLE+A  +  EM E 
Sbjct: 1265 SLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQ 1324

Query: 183  RPSPNCATYNAFITGYCRVNELDKALHLFSTMANNGIRPN-------------------- 222
               PN  TY   + G   V  L  A   F  M + G++P+                    
Sbjct: 1325 GCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARA 1384

Query: 223  ---------------RVTHNILVHALCKKGLLGDAVKFLGEVLADD 253
                            VT+NIL+H LCK G L DA +   +++  D
Sbjct: 1385 FELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVRGD 1430


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.140    0.424 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,919,816,001
Number of Sequences: 23463169
Number of extensions: 372555143
Number of successful extensions: 1301011
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8481
Number of HSP's successfully gapped in prelim test: 4141
Number of HSP's that attempted gapping in prelim test: 1028207
Number of HSP's gapped (non-prelim): 93194
length of query: 572
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 424
effective length of database: 8,886,646,355
effective search space: 3767938054520
effective search space used: 3767938054520
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 80 (35.4 bits)